BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025562
(251 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449433990|ref|XP_004134779.1| PREDICTED: 50S ribosomal protein L4-like [Cucumis sativus]
gi|449531047|ref|XP_004172499.1| PREDICTED: 50S ribosomal protein L4-like [Cucumis sativus]
Length = 315
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 164/225 (72%), Positives = 183/225 (81%), Gaps = 5/225 (2%)
Query: 1 MALTVSRRLLRRFGSFSAFGRYESPSLTSRSIRSPPDLYVACSGDN-LFPLKSGL----S 55
MA++VSRRLLR GS S FG+ S SRS +P ++Y SG + F +S L S
Sbjct: 1 MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGS 60
Query: 56 FLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMV 115
FLASR F T+ILTP+SS AFPS+LL K V + + IGL+QDL+IPVTNF NEDKGFMV
Sbjct: 61 FLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGLYQDLMIPVTNFENEDKGFMV 120
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
LAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW+QKGTGRARHGTL
Sbjct: 121 LAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTL 180
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RGPQFRGG TMHGPKPRSHA KLNKKVRRLGL IALSAR AEGK+
Sbjct: 181 RGPQFRGGATMHGPKPRSHAFKLNKKVRRLGLMIALSARVAEGKL 225
>gi|21553676|gb|AAM62769.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
Length = 300
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/224 (72%), Positives = 184/224 (82%), Gaps = 18/224 (8%)
Query: 1 MALTVSRRLLRRFGSFSAFGRYESPSLTSRSIRSPPDLYVACSGDNLF----PLKSGLSF 56
MA ++SRR+ R FGSFSA GR SP+L++ + SG+ L LK G++
Sbjct: 1 MAASISRRIFRTFGSFSALGRSSSPNLSANT-----------SGNGLASLTNDLKYGMAL 49
Query: 57 LASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVL 116
L++RK ST+ILTPD S FPSDLL KKTVLTPD TIG +QDLVIPVTNF NE+KGFMVL
Sbjct: 50 LSNRKLSTSILTPDDS---FPSDLLTKKTVLTPDRTIGQYQDLVIPVTNFQNEEKGFMVL 106
Query: 117 AGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLR 176
AGDVFDVPIRKDIIH VVRWQLAKRQQGTHSTKT+SEVSGTG+KPW QKGTGRARHGTLR
Sbjct: 107 AGDVFDVPIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTGRARHGTLR 166
Query: 177 GPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
GPQFRGG MHGPKPRSHAIK+NK+VRRLGLKIAL+ARAAEGK+
Sbjct: 167 GPQFRGGCVMHGPKPRSHAIKMNKQVRRLGLKIALTARAAEGKL 210
>gi|18399235|ref|NP_565463.1| large subunit ribosomal protein L4 [Arabidopsis thaliana]
gi|18252969|gb|AAL62411.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|20197568|gb|AAD24390.2| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|25084070|gb|AAN72167.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|330251866|gb|AEC06960.1| large subunit ribosomal protein L4 [Arabidopsis thaliana]
Length = 300
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/232 (71%), Positives = 187/232 (80%), Gaps = 18/232 (7%)
Query: 1 MALTVSRRLLRRFGSFSAFGRYESPSLTSRSIRSPPDLYVACSGDNLF----PLKSGLSF 56
MA ++SRR+ R FGSFSA GR SP+L++ + SG+ L LK G++
Sbjct: 1 MAASISRRIFRTFGSFSALGRSSSPNLSANT-----------SGNGLASLTNDLKYGMAL 49
Query: 57 LASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVL 116
L++RK ST+ILTPD S FPSDLL KKTVLTPD TIG +QDLVIPVTNF NE+KGFMVL
Sbjct: 50 LSNRKLSTSILTPDDS---FPSDLLTKKTVLTPDRTIGQYQDLVIPVTNFQNEEKGFMVL 106
Query: 117 AGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLR 176
AGDVFDVPIRKDIIH VVRWQLAKRQQGTHSTKT+SEVSGTG+KPW QKGTGRARHGTLR
Sbjct: 107 AGDVFDVPIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTGRARHGTLR 166
Query: 177 GPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
GPQFRGG MHGPKPRSHAIK+NK+VRRLGLKIAL+ARAAEGK+ + L L
Sbjct: 167 GPQFRGGCVMHGPKPRSHAIKMNKQVRRLGLKIALTARAAEGKLLVFDDLGL 218
>gi|255554769|ref|XP_002518422.1| 50S ribosomal protein L4, putative [Ricinus communis]
gi|223542267|gb|EEF43809.1| 50S ribosomal protein L4, putative [Ricinus communis]
Length = 294
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/220 (73%), Positives = 181/220 (82%), Gaps = 16/220 (7%)
Query: 1 MALTVSRRLLRRFGSFSAFGRYESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFLASR 60
MA+++SRR+LR F S PSLT +S R+ S ++ +K+G + LA R
Sbjct: 1 MAVSISRRILRSFRSL--------PSLTHQSFRA--------SHESSSFIKNGAASLACR 44
Query: 61 KFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDV 120
K ST+ILTP SS+ AFPSDLL KT+LTP+ IGLH+DLVIPVTNF NEDKGFMVLAGDV
Sbjct: 45 KLSTSILTPGSSDDAFPSDLLSTKTLLTPEREIGLHEDLVIPVTNFLNEDKGFMVLAGDV 104
Query: 121 FDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQF 180
FDVPI+K IIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP+RQKGTGRARHGTLRGPQF
Sbjct: 105 FDVPIKKHIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPYRQKGTGRARHGTLRGPQF 164
Query: 181 RGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RGG TMHGPKPRSHAIK NKKVRRLGLKIAL+ARAAEGK+
Sbjct: 165 RGGATMHGPKPRSHAIKCNKKVRRLGLKIALTARAAEGKL 204
>gi|297836242|ref|XP_002886003.1| 50S ribosomal protein L4 [Arabidopsis lyrata subsp. lyrata]
gi|297331843|gb|EFH62262.1| 50S ribosomal protein L4 [Arabidopsis lyrata subsp. lyrata]
Length = 297
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/232 (68%), Positives = 183/232 (78%), Gaps = 21/232 (9%)
Query: 1 MALTVSRRLLRRFGSFSAFGRYESPSLTSRSIRSPPDLYVACSGDNLFPL----KSGLSF 56
MA ++S R+ R FGS GR SP+L++ + SG+ L L K G++
Sbjct: 1 MAASISARIFRTFGSL---GRCSSPNLSANT-----------SGNGLSSLTSDLKYGMAL 46
Query: 57 LASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVL 116
L++RK ST ILTPD + FPSDLL KKTVLTPD TIG +QDLVIPVTNF +E+KGFMVL
Sbjct: 47 LSNRKLSTCILTPDDT---FPSDLLTKKTVLTPDRTIGQYQDLVIPVTNFQSEEKGFMVL 103
Query: 117 AGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLR 176
AGDVFDVPIRKDIIH VVRWQLAKRQQGTHSTKT+SEVSGTG+KPW QKGTGRARHGTLR
Sbjct: 104 AGDVFDVPIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTGRARHGTLR 163
Query: 177 GPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
GPQFRGG MHGPKPRSHAIK+NK+VRRLGLKIAL+ARAAEGK+ + L+L
Sbjct: 164 GPQFRGGCVMHGPKPRSHAIKMNKQVRRLGLKIALTARAAEGKLLVFDDLAL 215
>gi|359494830|ref|XP_003634850.1| PREDICTED: 50S ribosomal protein L4-like [Vitis vinifera]
gi|297741766|emb|CBI32995.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 159/225 (70%), Positives = 173/225 (76%), Gaps = 5/225 (2%)
Query: 1 MALTVSRRLLRRFGSFSAFGRYESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLS----- 55
MA+++SRRLLR FG FG SP + R+ L S D LF S
Sbjct: 1 MAVSISRRLLRTFGPSRVFGHCNSPMIMCPLFRTSDALCGLVSQDGLFSTDSSCKTGSSF 60
Query: 56 FLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMV 115
+ +TTILTP+SS AFP +LL KTVLTP+ T G +QDLVIPVTNF NEDKGFMV
Sbjct: 61 LSSRSLSTTTILTPESSGVAFPPELLSTKTVLTPERTPGHYQDLVIPVTNFHNEDKGFMV 120
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
LAGDVFDVPIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTG+KPWRQKGTGRARHGTL
Sbjct: 121 LAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTL 180
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RGPQFRGG MHGPKPRSHAIKLNKKVRRLGLKIALSAR AEGK+
Sbjct: 181 RGPQFRGGAIMHGPKPRSHAIKLNKKVRRLGLKIALSARTAEGKL 225
>gi|363807964|ref|NP_001242456.1| uncharacterized protein LOC100804238 [Glycine max]
gi|255635327|gb|ACU18017.1| unknown [Glycine max]
Length = 312
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 153/223 (68%), Positives = 176/223 (78%), Gaps = 3/223 (1%)
Query: 1 MALTVSRRLLRRFG-SFSAFGR--YESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFL 57
MA +S+R+LR S + GR ++SPS SI P D+ + SG+ + P L
Sbjct: 1 MAALISKRILRCSSWSLHSLGRCYFDSPSAGFASIYKPRDVCSSLSGERMLPADRSLVRS 60
Query: 58 ASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLA 117
R+FST+ILTP + + AFPSDLL KKT+ T + TIGL QDL+IPVTNF NEDKG+MV
Sbjct: 61 MVRQFSTSILTPGADDSAFPSDLLSKKTLATSERTIGLCQDLLIPVTNFHNEDKGYMVFP 120
Query: 118 GDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRG 177
GDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHG+LRG
Sbjct: 121 GDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGSLRG 180
Query: 178 PQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PQFRGG TMHGPKPRSHA K+NKKVR LGLKIALSARAAEGK+
Sbjct: 181 PQFRGGATMHGPKPRSHAFKVNKKVRCLGLKIALSARAAEGKL 223
>gi|356532241|ref|XP_003534682.1| PREDICTED: 50S ribosomal protein L4-like [Glycine max]
Length = 310
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/223 (69%), Positives = 175/223 (78%), Gaps = 5/223 (2%)
Query: 1 MALTVSRRLLR-RFGSFSAFGR--YESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFL 57
MA +S+R+LR GS + GR ++SP S I P D+ SG+ +F L
Sbjct: 1 MAALISKRILRCSSGSLHSLGRCYFDSPGFAS--IYKPRDVCGGLSGERMFSADRSLVGS 58
Query: 58 ASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLA 117
R+FST+ILTP + AFPSDLL KK + T + TIGL QDL+IPVTNF NEDKG+MVL
Sbjct: 59 MVRQFSTSILTPGDDDSAFPSDLLSKKILATSERTIGLCQDLLIPVTNFHNEDKGYMVLP 118
Query: 118 GDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRG 177
GDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHG+LRG
Sbjct: 119 GDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGSLRG 178
Query: 178 PQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PQFRGG TMHGPKPRSHA K+NKKVRRLGLKIALSARAAEGK+
Sbjct: 179 PQFRGGATMHGPKPRSHAFKVNKKVRRLGLKIALSARAAEGKL 221
>gi|255635335|gb|ACU18021.1| unknown [Glycine max]
Length = 224
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/223 (69%), Positives = 175/223 (78%), Gaps = 5/223 (2%)
Query: 1 MALTVSRRLLR-RFGSFSAFGR--YESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFL 57
MA +S+R+LR GS + GR ++SP S I P D+ SG+ +F L
Sbjct: 1 MAALISKRILRCSSGSLHSLGRCYFDSPGFAS--IYKPRDVCGGLSGERMFSADRSLVGS 58
Query: 58 ASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLA 117
R+FST+ILTP + AFPSDLL KK + T + TIGL QDL+IPVTNF NEDKG+MVL
Sbjct: 59 MVRQFSTSILTPGDDDSAFPSDLLSKKILATSERTIGLCQDLLIPVTNFHNEDKGYMVLP 118
Query: 118 GDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRG 177
GDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHG+LRG
Sbjct: 119 GDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGSLRG 178
Query: 178 PQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PQFRGG TMHGPKPRSHA K+NKKVRRLGLKIALSARAAEGK+
Sbjct: 179 PQFRGGATMHGPKPRSHAFKVNKKVRRLGLKIALSARAAEGKL 221
>gi|224118096|ref|XP_002331557.1| predicted protein [Populus trichocarpa]
gi|222873781|gb|EEF10912.1| predicted protein [Populus trichocarpa]
Length = 285
Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 163/214 (76%), Gaps = 32/214 (14%)
Query: 1 MALTVSRRLLRRFGSFSAFGRY-ESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFLAS 59
MAL++SRR+LR FGS S FGR +S SLT
Sbjct: 1 MALSISRRVLRSFGSLSGFGRCGDSSSLT------------------------------- 29
Query: 60 RKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGD 119
R+ ST+ +T +S++G+FPSDLL K V+TP IGL+QDLVIPVTNF NEDKG MVLAGD
Sbjct: 30 RQLSTSNVTSESTDGSFPSDLLSAKNVVTPQREIGLYQDLVIPVTNFHNEDKGLMVLAGD 89
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KP+RQKGTGRARHGTLRGPQ
Sbjct: 90 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPYRQKGTGRARHGTLRGPQ 149
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSA 213
FRGG MHGPKPRSHA KLNKKVRRLGLKIAL+A
Sbjct: 150 FRGGAVMHGPKPRSHAFKLNKKVRRLGLKIALTA 183
>gi|147767815|emb|CAN77922.1| hypothetical protein VITISV_027648 [Vitis vinifera]
Length = 278
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/158 (86%), Positives = 145/158 (91%)
Query: 63 STTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFD 122
+TT+LTP+SS AFP +LL KTVLTP+ T G +QDLVIPVTNF NEDKGFM LAGDVFD
Sbjct: 31 TTTMLTPESSGVAFPPELLSTKTVLTPERTPGHYQDLVIPVTNFHNEDKGFMXLAGDVFD 90
Query: 123 VPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRG 182
VPIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRG
Sbjct: 91 VPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRG 150
Query: 183 GTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
G MHGPKPRSHAIKLNKKVRRLGLKIALSAR AEGK+
Sbjct: 151 GAIMHGPKPRSHAIKLNKKVRRLGLKIALSARTAEGKL 188
>gi|357466353|ref|XP_003603461.1| 50S ribosomal protein L4 [Medicago truncatula]
gi|355492509|gb|AES73712.1| 50S ribosomal protein L4 [Medicago truncatula]
Length = 366
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 145/222 (65%), Positives = 166/222 (74%), Gaps = 19/222 (8%)
Query: 1 MALTVSRRLLRRFGSFSAFGR--YESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFLA 58
MA +S+RLLR + S + GR + SPS LY G+ L + L+
Sbjct: 48 MASFISKRLLRSYQSLHSLGRRCFNSPS--------AAGLY----GERLISAQRILTGSI 95
Query: 59 SRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAG 118
+++FST+ + E AFPSDLL KK + T + IGL QDL+IPVTNF NEDKGFMVLAG
Sbjct: 96 TQRFSTS-----TDEAAFPSDLLSKKPLATSERDIGLCQDLLIPVTNFHNEDKGFMVLAG 150
Query: 119 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
DVFD+PIRKDI+HRVV WQ AKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHG+LRGP
Sbjct: 151 DVFDMPIRKDIVHRVVLWQRAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGSLRGP 210
Query: 179 QFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
QFRGG HGPKPRSHA KLNKKVRRLGLKIALSARAAEGK+
Sbjct: 211 QFRGGEAKHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKL 252
>gi|388496888|gb|AFK36510.1| unknown [Lotus japonicus]
Length = 305
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/223 (61%), Positives = 159/223 (71%), Gaps = 11/223 (4%)
Query: 1 MALTVSRRLLRRFGSFSAFGRYESPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFLAS- 59
MA +S+RLLR S + GR R D+ + SG+ F + LA
Sbjct: 1 MAALISKRLLRSSESLHSLGR--------RCFHQSRDICSSLSGERRFSAQRPGLLLARS 52
Query: 60 --RKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLA 117
++F T++ P EGAFPSDLL K + T + IGL QDL+IPVTNF NEDKG MVLA
Sbjct: 53 MIQRFCTSVSVPGYHEGAFPSDLLSNKPLATSERDIGLCQDLLIPVTNFHNEDKGLMVLA 112
Query: 118 GDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRG 177
GDVFDVPIRKDIIHRVVRWQLA+RQQGTHSTKT+SEV GTG+K ++QKG G+ARHG+ R
Sbjct: 113 GDVFDVPIRKDIIHRVVRWQLARRQQGTHSTKTVSEVRGTGRKMYKQKGLGKARHGSQRV 172
Query: 178 PQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
FRGG MHGPKPRSHA KLNKKVRRLGLKIALSARAAEGK+
Sbjct: 173 HLFRGGAAMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKL 215
>gi|357156335|ref|XP_003577421.1| PREDICTED: 50S ribosomal protein L4-like [Brachypodium distachyon]
Length = 289
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/165 (76%), Positives = 140/165 (84%), Gaps = 1/165 (0%)
Query: 64 TTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDV 123
+T+L P ++EG PS+LL KTV TPD +G ++DLV VTNF NEDKGFMVL GDVFDV
Sbjct: 44 STLLAP-ANEGMIPSELLSSKTVWTPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDV 102
Query: 124 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGG 183
PIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTG+KP+ QKGTGRARHGTLRG QFRGG
Sbjct: 103 PIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPYAQKGTGRARHGTLRGCQFRGG 162
Query: 184 TTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
TMHGPKPRSHA KL KKVRRLGLKIALSAR AEGK+ + L L
Sbjct: 163 ATMHGPKPRSHAFKLQKKVRRLGLKIALSARTAEGKLCIFDDLDL 207
>gi|115486043|ref|NP_001068165.1| Os11g0585700 [Oryza sativa Japonica Group]
gi|77551649|gb|ABA94446.1| ribosomal protein L4/L1 family protein, expressed [Oryza sativa
Japonica Group]
gi|113645387|dbj|BAF28528.1| Os11g0585700 [Oryza sativa Japonica Group]
Length = 286
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 125/157 (79%), Positives = 137/157 (87%), Gaps = 1/157 (0%)
Query: 64 TTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDV 123
+T+L P ++E P +LL KTV TPD +G ++DLV VTNF NEDKGFMVL GDVFDV
Sbjct: 41 STLLAP-ANEVLIPQELLSSKTVWTPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDV 99
Query: 124 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGG 183
PIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTG+KP+ QKGTGRARHGTLRGPQFRGG
Sbjct: 100 PIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPYNQKGTGRARHGTLRGPQFRGG 159
Query: 184 TTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
TMHGPKPRSHAIKL KKVRRLGLKIALSAR AEGK+
Sbjct: 160 ATMHGPKPRSHAIKLQKKVRRLGLKIALSARTAEGKL 196
>gi|326524247|dbj|BAK00507.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 289
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 153/205 (74%), Gaps = 4/205 (1%)
Query: 24 SPSLTSRSIRSPPDLYVACSGDNLFPLKSGLSFLASRKFSTTILTPDSSEGAFPSDLLLK 83
+ S+ R++ PP L G + L L + S +ST L ++E P +LL
Sbjct: 7 AASILRRAVACPPQL--GAVGRDTSLLAKILPNVYSNGYST--LMAPANEVLIPPELLSS 62
Query: 84 KTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQ 143
KTV TPD +G ++DLV VTNF NEDKGFMVL GDVFDVPIRKDI+HRVVRWQLAKRQQ
Sbjct: 63 KTVWTPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDVPIRKDIVHRVVRWQLAKRQQ 122
Query: 144 GTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVR 203
GTHSTKTISEVSGTG+KP++QKGTGRARHGTLRG QFRGG TMHGPKPRSHA KL KKVR
Sbjct: 123 GTHSTKTISEVSGTGRKPYKQKGTGRARHGTLRGCQFRGGATMHGPKPRSHAFKLQKKVR 182
Query: 204 RLGLKIALSARAAEGKVSLSVSLSL 228
RLGLKIALSAR AEGK+ + L +
Sbjct: 183 RLGLKIALSARTAEGKLCIFEDLEV 207
>gi|222616220|gb|EEE52352.1| hypothetical protein OsJ_34399 [Oryza sativa Japonica Group]
Length = 353
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 125/157 (79%), Positives = 137/157 (87%), Gaps = 1/157 (0%)
Query: 64 TTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDV 123
+T+L P ++E P +LL KTV TPD +G ++DLV VTNF NEDKGFMVL GDVFDV
Sbjct: 108 STLLAP-ANEVLIPQELLSSKTVWTPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDV 166
Query: 124 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGG 183
PIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTG+KP+ QKGTGRARHGTLRGPQFRGG
Sbjct: 167 PIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPYNQKGTGRARHGTLRGPQFRGG 226
Query: 184 TTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
TMHGPKPRSHAIKL KKVRRLGLKIALSAR AEGK+
Sbjct: 227 ATMHGPKPRSHAIKLQKKVRRLGLKIALSARTAEGKL 263
>gi|242072798|ref|XP_002446335.1| hypothetical protein SORBIDRAFT_06g014470 [Sorghum bicolor]
gi|241937518|gb|EES10663.1| hypothetical protein SORBIDRAFT_06g014470 [Sorghum bicolor]
Length = 333
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/157 (79%), Positives = 137/157 (87%), Gaps = 1/157 (0%)
Query: 64 TTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDV 123
+T+L P SE P +LL +TV TPD +G ++DLV VTNF NEDKGFMVL GDVFDV
Sbjct: 88 STLLAP-PSEVLIPPELLSSRTVWTPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDV 146
Query: 124 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGG 183
PIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTG+KP++QKGTGRARHGTLRGPQFRGG
Sbjct: 147 PIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPYKQKGTGRARHGTLRGPQFRGG 206
Query: 184 TTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
TMHGPKPRSHAIKL KKVRRLGLKIALSAR AEGK+
Sbjct: 207 ATMHGPKPRSHAIKLQKKVRRLGLKIALSARTAEGKL 243
>gi|242032629|ref|XP_002463709.1| hypothetical protein SORBIDRAFT_01g004650 [Sorghum bicolor]
gi|241917563|gb|EER90707.1| hypothetical protein SORBIDRAFT_01g004650 [Sorghum bicolor]
Length = 294
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/157 (79%), Positives = 137/157 (87%), Gaps = 1/157 (0%)
Query: 64 TTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDV 123
+T+L P SE P +LL +TV TPD +G ++DLV VTNF NEDKGFMVL GDVFDV
Sbjct: 49 STLLAP-PSEVLIPPELLSSRTVWTPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDV 107
Query: 124 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGG 183
PIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTG+KP++QKGTGRARHGTLRGPQFRGG
Sbjct: 108 PIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPYKQKGTGRARHGTLRGPQFRGG 167
Query: 184 TTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
TMHGPKPRSHAIKL KKVRRLGLKIALSAR AEGK+
Sbjct: 168 ATMHGPKPRSHAIKLQKKVRRLGLKIALSARTAEGKL 204
>gi|414873447|tpg|DAA52004.1| TPA: 50S ribosomal protein L4 [Zea mays]
Length = 293
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/201 (65%), Positives = 149/201 (74%), Gaps = 9/201 (4%)
Query: 28 TSRSIRSPPDLYVACSGDNLFPLKSGLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVL 87
T+ S+ PP C NL G F +ST + P+ E P +LL +TV
Sbjct: 20 TTASLYHPPRNVGPCLVKNL----PGFFF---NGYSTLLAPPN--EVLIPPELLSSRTVW 70
Query: 88 TPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHS 147
TPD +G ++DLV VTNF NEDKGFMVL GDVFDVPIRKDI+HRVVRWQLAKRQQGTHS
Sbjct: 71 TPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDVPIRKDIVHRVVRWQLAKRQQGTHS 130
Query: 148 TKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGL 207
TKTISEVSGTG+KP+ QKGTG+ARHGTLRG QFRGG TMHGPKPRSHAIKL KKVRRLGL
Sbjct: 131 TKTISEVSGTGRKPYPQKGTGKARHGTLRGAQFRGGATMHGPKPRSHAIKLQKKVRRLGL 190
Query: 208 KIALSARAAEGKVSLSVSLSL 228
KIALSAR AEGK+ + L +
Sbjct: 191 KIALSARTAEGKLLIFEDLEV 211
>gi|226491762|ref|NP_001147335.1| LOC100280943 [Zea mays]
gi|195610184|gb|ACG26922.1| 50S ribosomal protein L4 [Zea mays]
Length = 293
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/201 (65%), Positives = 149/201 (74%), Gaps = 9/201 (4%)
Query: 28 TSRSIRSPPDLYVACSGDNLFPLKSGLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVL 87
T+ S+ PP C NL G F +ST + P+ E P +LL +TV
Sbjct: 20 TTASLYHPPRNVGPCLVKNL----PGFFF---NGYSTLLAPPN--EVLIPPELLSSRTVW 70
Query: 88 TPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHS 147
TPD +G ++DLV VTNF NEDKGFMVL GDVFDVPIRKDI+HRVVRWQLAKRQQGTHS
Sbjct: 71 TPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDVPIRKDIVHRVVRWQLAKRQQGTHS 130
Query: 148 TKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGL 207
TKTISEVSGTG+KP+ QKGTG+ARHGTLRG QFRGG TMHGPKPRSHAIKL KKVRRLGL
Sbjct: 131 TKTISEVSGTGRKPYPQKGTGKARHGTLRGAQFRGGATMHGPKPRSHAIKLQKKVRRLGL 190
Query: 208 KIALSARAAEGKVSLSVSLSL 228
KIALSAR AEGK+ + L +
Sbjct: 191 KIALSARTAEGKLLIFEDLEV 211
>gi|294463048|gb|ADE77062.1| unknown [Picea sitchensis]
Length = 323
Score = 236 bits (601), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 120/181 (66%), Positives = 138/181 (76%), Gaps = 6/181 (3%)
Query: 40 VACSGDNLFPLKSGLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDL 99
A SG+ ++ S +++R + + TP + PS+LL + G +DL
Sbjct: 59 AATSGNGMW------SLISARGLCSFVPTPQTDLVISPSELLAAQAAYAAQRVQGKFEDL 112
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
+ VTN NEDKG +VLAGDVFDVPIRKDIIHRVVRWQLAKR+QGTHSTKTISEVSGTG+
Sbjct: 113 TLRVTNMRNEDKGMIVLAGDVFDVPIRKDIIHRVVRWQLAKRRQGTHSTKTISEVSGTGR 172
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
KPW QKGTG+ARHGTLRGPQFR G TMHGPKPRSHAIKL KKVRRLGLKIALSARAAEGK
Sbjct: 173 KPWPQKGTGKARHGTLRGPQFRHGATMHGPKPRSHAIKLQKKVRRLGLKIALSARAAEGK 232
Query: 220 V 220
+
Sbjct: 233 L 233
>gi|218186003|gb|EEC68430.1| hypothetical protein OsI_36619 [Oryza sativa Indica Group]
Length = 273
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/157 (72%), Positives = 125/157 (79%), Gaps = 14/157 (8%)
Query: 64 TTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDV 123
+T+L P ++E P +LL KTV TPD ++DLV VTNF NEDKGFMVL GDVFDV
Sbjct: 41 STLLAP-ANEVLIPQELLSSKTVWTPDRQ---YEDLVARVTNFHNEDKGFMVLDGDVFDV 96
Query: 124 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGG 183
PIRKDI+HRV GTHSTKTISEVSGTG+KP+ QKGTGRARHGTLRGPQFRGG
Sbjct: 97 PIRKDIVHRV----------GTHSTKTISEVSGTGRKPYNQKGTGRARHGTLRGPQFRGG 146
Query: 184 TTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
TMHGPKPRSHAIKL KKVRRLGLKIALSAR AEGK+
Sbjct: 147 ATMHGPKPRSHAIKLQKKVRRLGLKIALSARTAEGKL 183
>gi|218186871|gb|EEC69298.1| hypothetical protein OsI_38360 [Oryza sativa Indica Group]
Length = 197
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 96/107 (89%), Positives = 101/107 (94%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
MVL GDVFDVPIRKDI+HRVVRWQLAKRQQGTHSTK ISEVSGTG+KP++QKGTGRARHG
Sbjct: 1 MVLDGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKIISEVSGTGRKPYKQKGTGRARHG 60
Query: 174 TLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
TLRGPQFRGG TMHGPKPRSH IKL KKVRRLGLKIALSAR AEGK+
Sbjct: 61 TLRGPQFRGGATMHGPKPRSHTIKLQKKVRRLGLKIALSARTAEGKL 107
>gi|223944103|gb|ACN26135.1| unknown [Zea mays]
Length = 197
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/115 (84%), Positives = 104/115 (90%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
MVL GDVFDVPIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTG+KP+ QKGTG+ARHG
Sbjct: 1 MVLDGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPYPQKGTGKARHG 60
Query: 174 TLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
TLRG QFRGG TMHGPKPRSHAIKL KKVRRLGLKIALSAR AEGK+ + L +
Sbjct: 61 TLRGAQFRGGATMHGPKPRSHAIKLQKKVRRLGLKIALSARTAEGKLLIFEDLEV 115
>gi|168041144|ref|XP_001773052.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675599|gb|EDQ62092.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 269
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 108/129 (83%)
Query: 94 GLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISE 153
G +D+ + VTNF +EDKG LAGDVFDVPIR D++HRVVRWQLAKR+QGT STK I E
Sbjct: 52 GQLKDVEVKVTNFQSEDKGLATLAGDVFDVPIRPDVVHRVVRWQLAKRRQGTASTKGIHE 111
Query: 154 VSGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSA 213
VSGTG+KP QKG+GRARHG+LRGPQFRGG T HGPKPRSH I L K+VRRLGLK+ALS+
Sbjct: 112 VSGTGRKPGPQKGSGRARHGSLRGPQFRGGATQHGPKPRSHEIGLQKQVRRLGLKVALSS 171
Query: 214 RAAEGKVSL 222
R AEGK+ +
Sbjct: 172 RVAEGKLKV 180
>gi|302772867|ref|XP_002969851.1| hypothetical protein SELMODRAFT_227946 [Selaginella moellendorffii]
gi|300162362|gb|EFJ28975.1| hypothetical protein SELMODRAFT_227946 [Selaginella moellendorffii]
Length = 215
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 108/132 (81%)
Query: 97 QDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSG 156
+D+V+PVTN+ EDKG + +AGD+FDVPIRKDI+H VV+WQ AKR++GTHSTKT EV+G
Sbjct: 2 RDVVLPVTNWEQEDKGTVTIAGDIFDVPIRKDIVHHVVKWQRAKRRKGTHSTKTRGEVAG 61
Query: 157 TGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
+ +K +QKGTG+ARHG+ R PQFRGG HGPKPRS+ KLNKKVRRLGLKIALSAR A
Sbjct: 62 STRKIHKQKGTGKARHGSRRAPQFRGGGVAHGPKPRSYEYKLNKKVRRLGLKIALSARVA 121
Query: 217 EGKVSLSVSLSL 228
E K+ L ++ L
Sbjct: 122 ERKLMLFDNVDL 133
>gi|302807160|ref|XP_002985293.1| hypothetical protein SELMODRAFT_181558 [Selaginella moellendorffii]
gi|300147121|gb|EFJ13787.1| hypothetical protein SELMODRAFT_181558 [Selaginella moellendorffii]
Length = 215
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 108/132 (81%)
Query: 97 QDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSG 156
+D+V+PVTN+ EDKG + +AGD+FDVPIRKDI+H VV+WQ AKR++GTHSTKT EV+G
Sbjct: 2 RDVVLPVTNWEQEDKGTVTIAGDIFDVPIRKDIVHHVVKWQRAKRRKGTHSTKTRGEVAG 61
Query: 157 TGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
+ +K +QKGTG+ARHG+ R PQFRGG HGPKPRS+ KLNKKVRRLGLKIALSAR A
Sbjct: 62 STRKINKQKGTGKARHGSRRAPQFRGGGVAHGPKPRSYEYKLNKKVRRLGLKIALSARVA 121
Query: 217 EGKVSLSVSLSL 228
E K+ L ++ L
Sbjct: 122 ERKLMLFDNVDL 133
>gi|307110022|gb|EFN58259.1| hypothetical protein CHLNCDRAFT_142203 [Chlorella variabilis]
Length = 322
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 112/166 (67%), Gaps = 1/166 (0%)
Query: 78 SDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQ 137
DLLL L GL++DL++P+ + + G + L GD+FDVPIR+DI+HRVVRWQ
Sbjct: 78 EDLLLPAIPLEQQERQGLYRDLIVPLYDLSRQPVGTVTLGGDIFDVPIRRDILHRVVRWQ 137
Query: 138 LAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIK 197
LAKRQQGTH TKT SEV G G+KP QKG+GR+R GT+R PQ+RGG HGP PRSH
Sbjct: 138 LAKRQQGTHKTKTRSEVRGGGRKPRPQKGSGRSRQGTIRAPQWRGGGVAHGPVPRSHEHD 197
Query: 198 LNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFSLSLKNTDT 243
L K+VRRLGL+ ALSA+A E ++ + SL P + L N D
Sbjct: 198 LPKRVRRLGLQCALSAKAWERRLLVVDSLQ-PAEPKTKVMLDNVDA 242
>gi|83584315|gb|ABC24932.1| plastid 50S ribosomal protein L4 family [Prototheca wickerhamii]
Length = 228
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/135 (57%), Positives = 95/135 (70%)
Query: 94 GLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISE 153
G DLV+P+ N G L GDVF+ +R DI+HRVVRWQLA RQQGTH TKT +E
Sbjct: 64 GSEADLVVPLLNHRGRSVGSFTLGGDVFNTVVRPDILHRVVRWQLAARQQGTHKTKTRTE 123
Query: 154 VSGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSA 213
V G G+KP QKG G +R G++R PQ+RGG HGP PRSHAIKL K +RRLGL+ ALSA
Sbjct: 124 VRGGGRKPRPQKGGGVSRQGSIRAPQWRGGGVAHGPVPRSHAIKLLKSIRRLGLRSALSA 183
Query: 214 RAAEGKVSLSVSLSL 228
+A EG++ + +L L
Sbjct: 184 KAREGRLVIVDTLRL 198
>gi|392383010|ref|YP_005032207.1| 50S ribosomal subunit protein L4 [Azospirillum brasilense Sp245]
gi|356877975|emb|CCC98837.1| 50S ribosomal subunit protein L4 [Azospirillum brasilense Sp245]
Length = 208
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/118 (61%), Positives = 89/118 (75%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N NE G + LA ++F +P R DI+ R+V WQLAKR+ GTH TKTISE+SGTGKKP+
Sbjct: 7 IKNLNNETVGEIELADEIFGLPSRTDILARMVNWQLAKRRAGTHKTKTISEISGTGKKPY 66
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RQKGTGRAR G++R QFRGG T+ GP RSH L KKVR+L LK ALS +AAEGK+
Sbjct: 67 RQKGTGRARQGSMRSAQFRGGATIFGPVVRSHEHDLTKKVRKLALKTALSTKAAEGKL 124
>gi|427429419|ref|ZP_18919454.1| LSU ribosomal protein L4p (L1e) [Caenispirillum salinarum AK4]
gi|425880612|gb|EKV29308.1| LSU ribosomal protein L4p (L1e) [Caenispirillum salinarum AK4]
Length = 206
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/120 (61%), Positives = 91/120 (75%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N+ G + LA D+F + +R D++HRVVRWQLAKRQ GTH TK ISE+SGT KK
Sbjct: 3 VDVITLDNKSAGSVELAEDIFGLDVRADLLHRVVRWQLAKRQAGTHKTKGISEISGTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTG AR G++R PQFRGG T+ GP RSHA L KKVR+LGLK ALSA+A +GK+
Sbjct: 63 PFRQKGTGHARQGSMRSPQFRGGATIFGPVVRSHAHDLPKKVRKLGLKTALSAKAKDGKL 122
>gi|209964041|ref|YP_002296956.1| 50S ribosomal protein L4 [Rhodospirillum centenum SW]
gi|226730714|sp|B6IRQ7.1|RL4_RHOCS RecName: Full=50S ribosomal protein L4
gi|209957507|gb|ACI98143.1| ribosomal protein L4 [Rhodospirillum centenum SW]
Length = 206
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 93/142 (65%), Gaps = 13/142 (9%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V N NE G + LA +VF +P R+DI+ R+V WQLAKR+QGTH TK ISE++GT KKPW
Sbjct: 5 VKNLNNETVGEIELADEVFGLPTRQDILTRMVLWQLAKRRQGTHKTKGISEIAGTTKKPW 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
RQKGTGRAR G+ R PQFRGG + GP RSH L KKVR+L LK ALS +AAEGK+
Sbjct: 65 RQKGTGRARQGSTRSPQFRGGARIFGPVVRSHEHDLTKKVRKLALKTALSTKAAEGKL-- 122
Query: 223 SVSLSLFLRPSFSLSLKNTDTH 244
F L DTH
Sbjct: 123 -----------FVLEAAKADTH 133
>gi|374291053|ref|YP_005038088.1| 50S ribosomal protein L4 [Azospirillum lipoferum 4B]
gi|357422992|emb|CBS85835.1| 50S ribosomal subunit protein L4 [Azospirillum lipoferum 4B]
Length = 209
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 87/118 (73%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N NE G + L+ VF +P R D++ R+V WQLAKR+ G H TK ISE+SGT KKP+
Sbjct: 8 IKNLNNEAVGEIELSDAVFGLPTRTDLLARMVNWQLAKRRSGNHKTKGISEISGTTKKPY 67
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
QKGTGRAR G++R PQFRGG T+ GP RSHA L KKVR+L LK ALSA+AAEGK+
Sbjct: 68 SQKGTGRARQGSIRSPQFRGGATIFGPVVRSHAHDLTKKVRKLALKTALSAKAAEGKL 125
>gi|288957423|ref|YP_003447764.1| 50S ribosomal protein L4 [Azospirillum sp. B510]
gi|288909731|dbj|BAI71220.1| large subunit ribosomal protein L4 [Azospirillum sp. B510]
Length = 206
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 88/118 (74%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N NE G + L+ VF +P R D++ R+V WQLAKR+ G H TK ISE+SGT KKP+
Sbjct: 5 IKNLNNEAVGEIELSDAVFGLPARTDLLARMVNWQLAKRRSGNHKTKGISEISGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
QKGTGRAR G++R PQFRGG T+ GP RSHA +L KKVR+L LK ALSA+AAEGK+
Sbjct: 65 GQKGTGRARQGSIRSPQFRGGATIFGPVVRSHAHELTKKVRKLALKTALSAKAAEGKL 122
>gi|56417002|ref|YP_154076.1| 50S ribosomal protein L4 [Anaplasma marginale str. St. Maries]
gi|222475370|ref|YP_002563787.1| 50S ribosomal protein L4 [Anaplasma marginale str. Florida]
gi|81599118|sp|Q5PA59.1|RL4_ANAMM RecName: Full=50S ribosomal protein L4
gi|254803710|sp|B9KJ69.1|RL4_ANAMF RecName: Full=50S ribosomal protein L4
gi|56388234|gb|AAV86821.1| 50S ribosomal protein L4 [Anaplasma marginale str. St. Maries]
gi|222419508|gb|ACM49531.1| 50S ribosomal protein L4 (rplD) [Anaplasma marginale str. Florida]
Length = 208
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 96/145 (66%), Gaps = 7/145 (4%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N NE G + L+ +VF V +R+D++ VV WQLAKR+ GTH T+ IS+VSGT K
Sbjct: 3 VNVVNIKNEVVGKVQLSAEVFGVQLRRDVLRDVVTWQLAKRRAGTHKTRCISDVSGTTAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQK TGRAR G+LR PQFRGG + GP RSHA LNKKVRRLGLK+ALS + ++ K+
Sbjct: 63 PYRQKHTGRARQGSLRSPQFRGGAVVFGPVNRSHAYSLNKKVRRLGLKVALSMKVSDSKL 122
Query: 221 SLSVSLSLFLRPSFSLSLKNTDTHV 245
+ L S L K D HV
Sbjct: 123 -------VVLDDSGLLLEKTADAHV 140
>gi|406989325|gb|EKE09117.1| hypothetical protein ACD_16C00213G0040 [uncultured bacterium]
Length = 206
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 97/137 (70%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V NF N+ G + L+ ++F P+R+DI+ R+V WQLAKR+ G H+TK IS++SGT KKPW
Sbjct: 5 VRNFDNKKVGEIKLSPEIFSAPLRQDILARMVHWQLAKRRSGNHATKGISQISGTTKKPW 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
RQKGTGRAR G+LR PQFRGG + GP RSH+ L KKVR+L LK ALS++AA G + +
Sbjct: 65 RQKGTGRARQGSLRSPQFRGGAVIFGPVTRSHSYSLPKKVRQLALKTALSSKAASGALLV 124
Query: 223 SVSLSLFLRPSFSLSLK 239
L ++ + L+ K
Sbjct: 125 VEDLKAGVKKTKDLAKK 141
>gi|83594019|ref|YP_427771.1| 50S ribosomal protein L4 [Rhodospirillum rubrum ATCC 11170]
gi|386350771|ref|YP_006049019.1| 50S ribosomal protein L4 [Rhodospirillum rubrum F11]
gi|109893631|sp|Q2RQW1.1|RL4_RHORT RecName: Full=50S ribosomal protein L4
gi|83576933|gb|ABC23484.1| LSU ribosomal protein L4P [Rhodospirillum rubrum ATCC 11170]
gi|346719207|gb|AEO49222.1| 50S ribosomal protein L4 [Rhodospirillum rubrum F11]
Length = 206
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 88/118 (74%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ VF +P+R D++HR+VRWQLA+RQ GTH TK ISE+SGT KP+
Sbjct: 5 VKTLDGKDAGSIELSDSVFGLPVRTDLLHRMVRWQLARRQAGTHKTKGISEISGTTAKPF 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
+QKGTG AR G+ R PQFRGG T+ GP RSHA LNKKVR+LGLK ALSA+A G++
Sbjct: 65 KQKGTGHARQGSKRSPQFRGGATIFGPVVRSHAHDLNKKVRKLGLKTALSAKAQAGQL 122
>gi|389878488|ref|YP_006372053.1| 50S ribosomal protein L4P [Tistrella mobilis KA081020-065]
gi|388529272|gb|AFK54469.1| 50S ribosomal protein L4P [Tistrella mobilis KA081020-065]
Length = 207
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 86/120 (71%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V NED G + LA +VF +P R DI+HR+VR+QLAKR+ GTH KTISE++G+ K
Sbjct: 3 VKVITLDNEDAGTIALADEVFGLPARVDILHRMVRYQLAKRRAGTHKVKTISEIAGSTAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
+RQKGTGRARHG R FRGG T+HGP RSHA L KKVRRL LK ALS +A GK+
Sbjct: 63 IYRQKGTGRARHGAKRANIFRGGATVHGPVVRSHAHDLPKKVRRLALKTALSVKAQGGKL 122
>gi|83312228|ref|YP_422492.1| 50S ribosomal protein L4 [Magnetospirillum magneticum AMB-1]
gi|109893601|sp|Q2W2J2.1|RL4_MAGMM RecName: Full=50S ribosomal protein L4
gi|82947069|dbj|BAE51933.1| Ribosomal protein L4 [Magnetospirillum magneticum AMB-1]
Length = 206
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 87/118 (73%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V + N+ G + LA ++F VP+R DI+ R V WQLAKRQ G H TKTISE+SGT KKP+
Sbjct: 5 VISLDNQTVGEIELADEIFGVPVRGDILFRAVNWQLAKRQSGNHKTKTISEISGTTKKPF 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
QKG GRAR G+LR QFRGG+T+ GP RSHA L KKVR+L LK ALSA+ A+GK+
Sbjct: 65 AQKGGGRARQGSLRSAQFRGGSTIFGPVVRSHAHDLPKKVRKLALKTALSAKVADGKL 122
>gi|452965939|gb|EME70956.1| 50S ribosomal protein L4 [Magnetospirillum sp. SO-1]
Length = 206
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 87/118 (73%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V + N+ G + LA ++F +P+R DI+ R V WQLAKRQ G H TKTISE+SGT KKP+
Sbjct: 5 VISLDNQTVGEIELADEIFGLPVRGDILFRAVNWQLAKRQSGNHKTKTISEISGTTKKPF 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
QKG GRAR G+LR QFRGG T+ GP RSHA L KKVR+L LK ALSA+AA+GK+
Sbjct: 65 AQKGGGRARQGSLRSAQFRGGATIFGPVVRSHAHDLPKKVRKLALKTALSAKAADGKL 122
>gi|145351929|ref|XP_001420312.1| Putative mitochondrial ribosomal protein L4 [Ostreococcus
lucimarinus CCE9901]
gi|144580546|gb|ABO98605.1| Putative mitochondrial ribosomal protein L4 [Ostreococcus
lucimarinus CCE9901]
Length = 224
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 92/127 (72%)
Query: 94 GLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISE 153
G +D V+PV +F E +G + L G +FD P+R D+ HRVVRWQ AK ++G H TK+ E
Sbjct: 12 GRGEDAVVPVYSFDGEARGSVELPGRIFDQPLRVDVAHRVVRWQRAKARKGLHKTKSRGE 71
Query: 154 VSGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSA 213
V+G+ +K QKG+GRAR G L+ PQ RGG T HGP RSHA L KKVRR+GLK+ALSA
Sbjct: 72 VAGSTRKVRPQKGSGRARVGNLKAPQMRGGGTAHGPVVRSHAHALPKKVRRMGLKVALSA 131
Query: 214 RAAEGKV 220
+AAEGK+
Sbjct: 132 KAAEGKL 138
>gi|23014087|ref|ZP_00053924.1| COG0088: Ribosomal protein L4 [Magnetospirillum magnetotacticum
MS-1]
Length = 206
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 87/118 (73%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V + N+ G + LA ++F +P+R DI+ R V WQLAKRQ G H TKTISE+SGT KKP+
Sbjct: 5 VISLDNQTVGEIELADEIFGLPVRGDILFRAVNWQLAKRQSGNHKTKTISEISGTTKKPF 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
QKG GRAR G+LR QFRGG+T+ GP RSHA L KKVR+L LK ALSA+ A+GK+
Sbjct: 65 AQKGGGRARQGSLRSAQFRGGSTIFGPVVRSHAHDLPKKVRKLALKTALSAKVADGKL 122
>gi|144900885|emb|CAM77749.1| 50S ribosomal protein L4 [Magnetospirillum gryphiswaldense MSR-1]
Length = 205
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/118 (57%), Positives = 89/118 (75%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V + N+ G + L+ DVF + +R D++HR+V +QL+KR+ GTH TK ISE+SGT KKP+
Sbjct: 5 VISLDNQSVGEIDLSDDVFGLAVRNDLLHRMVSYQLSKRRSGTHKTKGISEISGTTKKPF 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
QKG GRAR G+LR QFRGG T+ GP RSHA + KKVR+L LK+ALSA+AAEGK+
Sbjct: 65 NQKGGGRARQGSLRSAQFRGGATIFGPVVRSHAFDMPKKVRKLALKVALSAKAAEGKL 122
>gi|88606786|ref|YP_504893.1| 50S ribosomal protein L4 [Anaplasma phagocytophilum HZ]
gi|109893574|sp|Q2GL58.1|RL4_ANAPZ RecName: Full=50S ribosomal protein L4
gi|88597849|gb|ABD43319.1| ribosomal protein L4 [Anaplasma phagocytophilum HZ]
Length = 208
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 90/133 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N NE G + L VF + R+D++ VV WQLAKR+ GTH K IS++SGT K
Sbjct: 3 VNIVNIANEVVGSIDLNPQVFGLEPRRDVLKEVVNWQLAKRRAGTHKAKGISDISGTTAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQK TGRAR G+LR PQFRGG + GP PRSH LNKKVRRLGLK+ALS + A K+
Sbjct: 63 PYRQKHTGRARQGSLRSPQFRGGAVIFGPVPRSHEYSLNKKVRRLGLKVALSMKVAANKL 122
Query: 221 SLSVSLSLFLRPS 233
+ SL + L+ +
Sbjct: 123 VVLDSLDVDLKKT 135
>gi|308809341|ref|XP_003081980.1| 50S ribosomal protein L4 (ISS) [Ostreococcus tauri]
gi|116060447|emb|CAL55783.1| 50S ribosomal protein L4 (ISS) [Ostreococcus tauri]
Length = 275
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/117 (61%), Positives = 83/117 (70%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G L G +FD P+R D+ HRVVRWQ AK + GTH TKT EVSGT +K QKG GRA
Sbjct: 53 RGEATLPGRIFDQPLRVDVAHRVVRWQRAKARAGTHKTKTRGEVSGTTRKARPQKGQGRA 112
Query: 171 RHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLS 227
R G LR PQ RGG HGP PRSHA L KKVRR+GLK+ALSARAAEGK+ + S +
Sbjct: 113 RVGMLRAPQMRGGGVAHGPVPRSHAYALPKKVRRMGLKVALSARAAEGKIVIVDSFA 169
>gi|384261633|ref|YP_005416819.1| 50S ribosomal protein L4 [Rhodospirillum photometricum DSM 122]
gi|378402733|emb|CCG07849.1| 50S ribosomal protein L4 [Rhodospirillum photometricum DSM 122]
Length = 206
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 86/118 (72%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V + G + L+ VF +P+R D++HR+VRWQLAKRQ GTH TK ISE+SGT KP+
Sbjct: 5 VKTLDGANAGSVELSEAVFGLPVRADLLHRLVRWQLAKRQAGTHKTKGISEISGTTAKPF 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
+QKGTG AR G+ R PQFRGG T+ GP RSHA L KKVR+LGLK ALSA+ A G++
Sbjct: 65 KQKGTGNARQGSKRSPQFRGGATIFGPVVRSHAHDLPKKVRKLGLKTALSAKVAAGEI 122
>gi|163796918|ref|ZP_02190875.1| 50S ribosomal protein L2 [alpha proteobacterium BAL199]
gi|159177907|gb|EDP62456.1| 50S ribosomal protein L2 [alpha proteobacterium BAL199]
Length = 206
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 88/122 (72%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VTN E G + L +F + R+DI+ RVV WQLAKR+ G H TK+ISE+SGT
Sbjct: 1 MKLEVTNLDAEKTGEIDLDDSIFGLDPRRDILARVVNWQLAKRRSGNHKTKSISEISGTT 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTGRAR G++R QFRGG T+HGP RSHA L KKVR+LGLK ALSA+ G
Sbjct: 61 KKPFRQKGTGRARQGSIRATQFRGGQTVHGPVVRSHAHDLPKKVRKLGLKCALSAKLKSG 120
Query: 219 KV 220
++
Sbjct: 121 QL 122
>gi|269958585|ref|YP_003328372.1| 50S ribosomal protein L4 [Anaplasma centrale str. Israel]
gi|269848414|gb|ACZ49058.1| 50S ribosomal protein L4 [Anaplasma centrale str. Israel]
Length = 208
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 84/120 (70%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N NE G + L VF V R+D++ VV WQLAKR+ GTH T+ IS+V GT K
Sbjct: 3 VNVVNIKNEVVGQLELNASVFGVQPRRDVLRDVVDWQLAKRRAGTHKTRCISDVRGTTAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQK TGRAR G+LR PQFRGG + GP RSHA LNKKVRRLGLK+ALS + ++ K+
Sbjct: 63 PYRQKHTGRARQGSLRSPQFRGGAVVFGPVNRSHAYSLNKKVRRLGLKVALSMKVSDSKL 122
>gi|347758880|ref|YP_004866442.1| 50S ribosomal protein L4 [Micavibrio aeruginosavorus ARL-13]
gi|347591398|gb|AEP10440.1| 50S ribosomal protein L4 [Micavibrio aeruginosavorus ARL-13]
Length = 207
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 84/120 (70%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N N++ G + L +F + +R DI+HR+V +QL KR+ GTH TK I EVSGTGKK
Sbjct: 3 VAVKNLQNKEVGQIDLDDAIFGMSVRNDILHRMVHFQLNKRRAGTHDTKEIGEVSGTGKK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P++QKGTG R G+LR PQ RGG + GP PRSHA L KKVR L LK ALSA+A GK+
Sbjct: 63 PFKQKGTGNGRQGSLRSPQMRGGAVIFGPTPRSHATDLPKKVRALALKTALSAKAKAGKL 122
>gi|365854813|ref|ZP_09394878.1| 50S ribosomal protein L4 [Acetobacteraceae bacterium AT-5844]
gi|363719762|gb|EHM03061.1| 50S ribosomal protein L4 [Acetobacteraceae bacterium AT-5844]
Length = 222
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 82/122 (67%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ +PV N G + L DVF R DI+ RVV WQLAKR+ GTH K + EVSGT
Sbjct: 17 MQVPVITLDNGKAGDIDLPDDVFATSPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTT 76
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTG AR G+LR PQFR G +HGP R H LNKKVRRLGL ALS +AAEG
Sbjct: 77 KKPYRQKGTGNARQGSLRAPQFRTGGVVHGPVVRDHGYSLNKKVRRLGLISALSQKAAEG 136
Query: 219 KV 220
K+
Sbjct: 137 KL 138
>gi|381165702|ref|ZP_09874929.1| 50S ribosomal subunit protein L4 [Phaeospirillum molischianum DSM
120]
gi|380685192|emb|CCG39741.1| 50S ribosomal subunit protein L4 [Phaeospirillum molischianum DSM
120]
Length = 206
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 85/118 (72%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V + N+ G + LA VF +P+R DI+ R+V WQLAKR+ G H TK I E+SGT KKP+
Sbjct: 5 VISLENQTVGEIELAETVFGLPVRTDILARMVNWQLAKRRSGNHKTKGIKEISGTTKKPF 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
QKG GRAR G+LR PQFRGG T+ GP RSHA L KKVR+L LK ALSA+A +GK+
Sbjct: 65 AQKGGGRARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVRKLALKTALSAKAGDGKL 122
>gi|110634029|ref|YP_674237.1| 50S ribosomal protein L4 [Chelativorans sp. BNC1]
gi|123057912|sp|Q11HQ3.1|RL4_MESSB RecName: Full=50S ribosomal protein L4
gi|110285013|gb|ABG63072.1| LSU ribosomal protein L4P [Chelativorans sp. BNC1]
Length = 206
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 88/128 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ VT +D G + ++ ++F + R+DI+HRVVRWQLAKRQQGTH K +E++ TG K
Sbjct: 3 LKVTTLAGKDAGKVEVSDEIFGLDPREDILHRVVRWQLAKRQQGTHKAKGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
+RQKGTGRARH + R PQFRGG HGP P SHA L KKVR LGLK ALSA+A +
Sbjct: 63 MYRQKGTGRARHSSARAPQFRGGGKAHGPVPHSHAHDLPKKVRALGLKHALSAKAKSANL 122
Query: 221 SLSVSLSL 228
+ L++
Sbjct: 123 IIVDDLAI 130
>gi|51473838|ref|YP_067595.1| 50S ribosomal protein L4 [Rickettsia typhi str. Wilmington]
gi|383752614|ref|YP_005427714.1| 50S ribosomal protein L4 [Rickettsia typhi str. TH1527]
gi|383843450|ref|YP_005423953.1| 50S ribosomal protein L4 [Rickettsia typhi str. B9991CWPP]
gi|81610771|sp|Q68W79.1|RL4_RICTY RecName: Full=50S ribosomal protein L4
gi|51460150|gb|AAU04113.1| 50S ribosomal protein L4 [Rickettsia typhi str. Wilmington]
gi|380759257|gb|AFE54492.1| 50S ribosomal protein L4 [Rickettsia typhi str. TH1527]
gi|380760097|gb|AFE55331.1| 50S ribosomal protein L4 [Rickettsia typhi str. B9991CWPP]
Length = 207
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 108 NEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKG 166
NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEVSGT KKP++QKG
Sbjct: 10 NEEVGEITLNKDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVSGTTKKPFKQKG 69
Query: 167 TGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSL 226
TG AR G+LR Q RGG HGPK RSHAIKL KKVR+LGL ALS + A GK+ + SL
Sbjct: 70 TGNARQGSLRSIQMRGGGISHGPKVRSHAIKLPKKVRKLGLIHALSEKCAAGKLLIINSL 129
Query: 227 SL 228
L
Sbjct: 130 KL 131
>gi|91205876|ref|YP_538231.1| 50S ribosomal protein L4 [Rickettsia bellii RML369-C]
gi|157826765|ref|YP_001495829.1| 50S ribosomal protein L4 [Rickettsia bellii OSU 85-389]
gi|109893633|sp|Q1RHM2.1|RL4_RICBR RecName: Full=50S ribosomal protein L4
gi|166199856|sp|A8GVB5.1|RL4_RICB8 RecName: Full=50S ribosomal protein L4
gi|91069420|gb|ABE05142.1| 50S ribosomal protein L4 [Rickettsia bellii RML369-C]
gi|157802069|gb|ABV78792.1| 50S ribosomal protein L4 [Rickettsia bellii OSU 85-389]
Length = 207
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ N NE+ G + L D+F V IR DII +VV WQ AK GTH TKT+SEVSGT KKP
Sbjct: 5 ILNLANEEIGEISLNEDIFAVEFIRDDIIKQVVDWQRAKAMAGTHKTKTVSEVSGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVS 221
++QKGTG AR G+LR Q RGG +HGP RSHA KL KKVR+LGL ALS + +EGK+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVIHGPVVRSHATKLPKKVRKLGLIHALSEKFSEGKLL 124
Query: 222 LSVSLSL 228
+ SL L
Sbjct: 125 VIDSLKL 131
>gi|402703209|ref|ZP_10851188.1| 50S ribosomal protein L4 [Rickettsia helvetica C9P9]
Length = 207
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L+ D+F V IR DII RV+ WQ AK G H TKT+SEVSGT KKP
Sbjct: 5 ILSLANEEVGEISLSEDIFAVEFIRDDIIKRVIDWQRAKAMSGNHKTKTVSEVSGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVS 221
++QKGTG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGK+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKFAEGKLL 124
Query: 222 LSVSLSL 228
+ SL L
Sbjct: 125 VIDSLKL 131
>gi|390450920|ref|ZP_10236504.1| 50S ribosomal protein L4 [Nitratireductor aquibiodomus RA22]
gi|389661682|gb|EIM73281.1| 50S ribosomal protein L4 [Nitratireductor aquibiodomus RA22]
Length = 206
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 89/128 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I VT +D G + ++ ++F + R+DI+HRVVRWQLAK+QQGTH TK SE+S TG K
Sbjct: 3 IKVTTLAGKDAGKLKISDEIFGLDPREDILHRVVRWQLAKKQQGTHKTKGRSEISRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
+RQKGTGRARH + R PQFRGG HGP R H+ L KKVR LGLK ALSA+A + +
Sbjct: 63 MYRQKGTGRARHSSARVPQFRGGGRAHGPVVRDHSHDLPKKVRALGLKHALSAKAKDSSL 122
Query: 221 SLSVSLSL 228
+ L+L
Sbjct: 123 IIIDDLAL 130
>gi|337286817|ref|YP_004626290.1| 50S ribosomal protein L4/L1e [Thermodesulfatator indicus DSM 15286]
gi|335359645|gb|AEH45326.1| ribosomal protein L4/L1e [Thermodesulfatator indicus DSM 15286]
Length = 207
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 85/120 (70%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E + L D+F+VP++ ++H+VVRWQ+A+ + GT TKT EV G G+K
Sbjct: 4 VAVVNNKKEKVDEVNLREDIFNVPVKVGLLHQVVRWQMARWRAGTACTKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R P + GG + GPKPR + K+NKK RRL LK+ALSARA EGK+
Sbjct: 64 PWRQKGTGRARQGSIRAPHWVGGGVVFGPKPRDYEFKVNKKERRLALKMALSARAQEGKL 123
>gi|296533988|ref|ZP_06896504.1| ribosomal protein L4/L1 family protein [Roseomonas cervicalis ATCC
49957]
gi|296265654|gb|EFH11763.1| ribosomal protein L4/L1 family protein [Roseomonas cervicalis ATCC
49957]
Length = 206
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 81/122 (66%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ +PV N G + L +F R DI+ RVV WQLAKR+ GTH K + EVSGT
Sbjct: 1 MQLPVITLDNGQAGEIDLPDALFAAAPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTT 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTG AR G+LR PQFR G +HGP R H LNKKVRRLGL ALS +AAEG
Sbjct: 61 KKPYRQKGTGNARQGSLRAPQFRTGGAVHGPVVRDHGYSLNKKVRRLGLISALSQKAAEG 120
Query: 219 KV 220
K+
Sbjct: 121 KL 122
>gi|114704485|ref|ZP_01437393.1| 50S ribosomal protein L4 [Fulvimarina pelagi HTCC2506]
gi|114539270|gb|EAU42390.1| 50S ribosomal protein L4 [Fulvimarina pelagi HTCC2506]
Length = 206
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + D G + L+ +F + R+DI+HR+VR+QLAKRQQGTHST S+V+ TG K
Sbjct: 3 VTIKKLDGADAGTVTLSEAIFGLDPRQDILHRMVRYQLAKRQQGTHSTLGRSDVARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+RQKGTGRARH T + PQFRGG HGP PRSHAI L KK+R L LK ALSA+A G
Sbjct: 63 MYRQKGTGRARHSTAKAPQFRGGGIAHGPTPRSHAIDLPKKLRALALKHALSAKAKSG 120
>gi|218290004|ref|ZP_03494181.1| ribosomal protein L4/L1e [Alicyclobacillus acidocaldarius LAA1]
gi|218239989|gb|EED07176.1| ribosomal protein L4/L1e [Alicyclobacillus acidocaldarius LAA1]
Length = 206
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 89/132 (67%), Gaps = 1/132 (0%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L +F PIR D++H VV LA R++GTH TKT +EVSG G+K
Sbjct: 4 VAVLNTAGQQVGEIELNEKIFGAPIRPDLMHIVVLQYLAARRRGTHKTKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+RGG +HGP PRS+A K+ KKVRR L ALS++ EGK+
Sbjct: 64 PWRQKGTGRARQGSIRAPQWRGGGVVHGPVPRSYAFKVPKKVRRAALYSALSSKVQEGKI 123
Query: 221 SLSVSLSLFLRP 232
+ L F RP
Sbjct: 124 VVVEGLE-FERP 134
>gi|258512669|ref|YP_003186103.1| 50S ribosomal protein L4 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479395|gb|ACV59714.1| ribosomal protein L4/L1e [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 206
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 89/132 (67%), Gaps = 1/132 (0%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L +F PIR D++H VV LA R++GTH TKT +EVSG G+K
Sbjct: 4 VAVLNTAGQQVGEIELNEKIFGAPIRPDLMHIVVLQYLAARRRGTHKTKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+RGG +HGP PRS+A K+ KKVRR L ALS++ EGK+
Sbjct: 64 PWRQKGTGRARQGSIRAPQWRGGGVVHGPVPRSYAFKVPKKVRRAALYSALSSKVQEGKI 123
Query: 221 SLSVSLSLFLRP 232
+ L F RP
Sbjct: 124 VVVEGLE-FERP 134
>gi|383501401|ref|YP_005414760.1| 50S ribosomal protein L4 [Rickettsia australis str. Cutlack]
gi|378932412|gb|AFC70917.1| 50S ribosomal protein L4 [Rickettsia australis str. Cutlack]
Length = 207
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 108 NEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKG 166
NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEVSGT KKP++QKG
Sbjct: 10 NEEVGEISLNEDIFAVEFIRNDIIKQVIDWQRAKAMSGNHKTKTVSEVSGTTKKPFKQKG 69
Query: 167 TGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSL 226
TG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGK+ + SL
Sbjct: 70 TGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKFAEGKLLVIDSL 129
Query: 227 SL 228
L
Sbjct: 130 KL 131
>gi|15604504|ref|NP_221022.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Madrid E]
gi|383486649|ref|YP_005404329.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. GvV257]
gi|383488057|ref|YP_005405736.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Chernikova]
gi|383488902|ref|YP_005406580.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Katsinyian]
gi|383489742|ref|YP_005407419.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Dachau]
gi|383499882|ref|YP_005413243.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. BuV67-CWPP]
gi|383500719|ref|YP_005414079.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. RpGvF24]
gi|386082522|ref|YP_005999099.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Rp22]
gi|6226007|sp|Q9ZCQ6.1|RL4_RICPR RecName: Full=50S ribosomal protein L4
gi|3861198|emb|CAA15098.1| 50S RIBOSOMAL PROTEIN L4 (rplD) [Rickettsia prowazekii str. Madrid
E]
gi|292572286|gb|ADE30201.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Rp22]
gi|380757014|gb|AFE52251.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. GvV257]
gi|380758416|gb|AFE53652.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. RpGvF24]
gi|380760936|gb|AFE49458.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Chernikova]
gi|380761781|gb|AFE50302.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Katsinyian]
gi|380762628|gb|AFE51148.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. BuV67-CWPP]
gi|380763465|gb|AFE51984.1| 50S ribosomal protein L4 [Rickettsia prowazekii str. Dachau]
Length = 207
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 108 NEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKG 166
NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEVSGT KKP++QKG
Sbjct: 10 NEEVGEITLNKDIFAVEFIRDDIIKQVIDWQRAKAMFGNHKTKTVSEVSGTTKKPFKQKG 69
Query: 167 TGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSL 226
TG AR G+LR Q RGG HGPK RSHAIKL KKVR+LGL ALS + AE K+ + SL
Sbjct: 70 TGNARQGSLRSVQMRGGGISHGPKVRSHAIKLPKKVRKLGLIHALSEKYAEEKLLIIDSL 129
Query: 227 SL 228
L
Sbjct: 130 KL 131
>gi|384136730|ref|YP_005519444.1| 50S ribosomal protein L4 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339290815|gb|AEJ44925.1| ribosomal protein L4/L1e [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 203
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 89/132 (67%), Gaps = 1/132 (0%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L +F PIR D++H VV LA R++GTH TKT +EVSG G+K
Sbjct: 1 MAVLNTAGQQVGEIELNEKIFGAPIRPDLMHIVVLQYLAARRRGTHKTKTRAEVSGGGRK 60
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+RGG +HGP PRS+A K+ KKVRR L ALS++ EGK+
Sbjct: 61 PWRQKGTGRARQGSIRAPQWRGGGVVHGPVPRSYAFKVPKKVRRAALYSALSSKVQEGKI 120
Query: 221 SLSVSLSLFLRP 232
+ L F RP
Sbjct: 121 VVVEGLE-FERP 131
>gi|407779021|ref|ZP_11126281.1| 50S ribosomal protein L4 [Nitratireductor pacificus pht-3B]
gi|407299305|gb|EKF18437.1| 50S ribosomal protein L4 [Nitratireductor pacificus pht-3B]
Length = 206
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 82/115 (71%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I VT D G + ++ ++F + R DI+HRVVRWQLAK+QQGTH +K +E+S TG K
Sbjct: 3 IKVTTLTGTDAGKLKISDEIFGLEPRDDILHRVVRWQLAKKQQGTHKSKGRAEISRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
++QKGTGRARH + R PQFRGG HGP RSHA L KKVR LGLK ALSA+A
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHAHDLPKKVRALGLKHALSAKA 117
>gi|67458671|ref|YP_246295.1| 50S ribosomal protein L4 [Rickettsia felis URRWXCal2]
gi|75536864|sp|Q4UMS8.1|RL4_RICFE RecName: Full=50S ribosomal protein L4
gi|67004204|gb|AAY61130.1| 50S ribosomal protein L4 [Rickettsia felis URRWXCal2]
Length = 207
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 108 NEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKG 166
NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEVSGT KKP++QKG
Sbjct: 10 NEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVSGTTKKPFKQKG 69
Query: 167 TGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSL 226
TG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGK+ + SL
Sbjct: 70 TGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKFAEGKLLVIDSL 129
Query: 227 SL 228
L
Sbjct: 130 KL 131
>gi|239948318|ref|ZP_04700071.1| ribosomal protein L4/L1 family protein [Rickettsia endosymbiont of
Ixodes scapularis]
gi|241563414|ref|XP_002401694.1| ribosomal protein L4, putative [Ixodes scapularis]
gi|215501886|gb|EEC11380.1| ribosomal protein L4, putative [Ixodes scapularis]
gi|239922594|gb|EER22618.1| ribosomal protein L4/L1 family protein [Rickettsia endosymbiont of
Ixodes scapularis]
Length = 207
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 108 NEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKG 166
NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEVSGT KKP++QKG
Sbjct: 10 NEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVSGTTKKPFKQKG 69
Query: 167 TGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSL 226
TG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGK+ + SL
Sbjct: 70 TGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKFAEGKLLVIDSL 129
Query: 227 SL 228
L
Sbjct: 130 KL 131
>gi|409402007|ref|ZP_11251633.1| 50S ribosomal protein L4 [Acidocella sp. MX-AZ02]
gi|409129325|gb|EKM99183.1| 50S ribosomal protein L4 [Acidocella sp. MX-AZ02]
Length = 204
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 83/120 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +F + G + L ++F R DII RV+ WQLAKR+ GTH K + EVSGT +K
Sbjct: 3 LDVVDFDAKAAGSVELPDELFAAEPRVDIIARVIHWQLAKRRAGTHKVKGMGEVSGTTRK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P++QKGTG AR G+LR PQFR G +HGP R H LNKKVRRLGL ALSA+AAEGK+
Sbjct: 63 PYKQKGTGNARQGSLRAPQFRTGGAVHGPVVRDHGYSLNKKVRRLGLISALSAKAAEGKL 122
>gi|407783108|ref|ZP_11130313.1| 50S ribosomal protein L4 [Oceanibaculum indicum P24]
gi|407203579|gb|EKE73565.1| 50S ribosomal protein L4 [Oceanibaculum indicum P24]
Length = 205
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 82/120 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N D G + L VF V +R D++ RVV WQLAKR+ G H TK ISE++GT KK
Sbjct: 3 VTVKNLEAADVGAIELDEAVFGVDVRADLLSRVVHWQLAKRRSGNHKTKGISEIAGTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P++QKGTGRAR G+ R PQFRGG T+ GP R H L KKVR+LGLK AL+A+ + K+
Sbjct: 63 PYKQKGTGRARQGSTRSPQFRGGATIFGPVVRDHGYDLPKKVRKLGLKTALAAKLKDEKL 122
>gi|58038854|ref|YP_190818.1| 50S ribosomal protein L4 [Gluconobacter oxydans 621H]
gi|81557183|sp|Q5FTY4.1|RL4_GLUOX RecName: Full=50S ribosomal protein L4
gi|58001268|gb|AAW60162.1| LSU ribosomal protein L4P [Gluconobacter oxydans 621H]
Length = 204
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 80/118 (67%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G + L ++F V R DI+ RVV WQLAKR+ GTH TK + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGSVALPEEIFAVTPRSDIMARVVHWQLAKRRAGTHRTKGMGEISGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RQKGTG AR G+LR PQFR G +HGP R H L KKVRRLGL ALS +AAEGK+
Sbjct: 65 RQKGTGSARQGSLRAPQFRTGGVVHGPVVRDHGYDLPKKVRRLGLICALSQKAAEGKL 122
>gi|341584193|ref|YP_004764684.1| 50S ribosomal protein L4 [Rickettsia heilongjiangensis 054]
gi|350273786|ref|YP_004885099.1| 50S ribosomal protein L4 [Rickettsia japonica YH]
gi|340808418|gb|AEK75006.1| 50S ribosomal protein L4 [Rickettsia heilongjiangensis 054]
gi|348592999|dbj|BAK96960.1| 50S ribosomal protein L4 [Rickettsia japonica YH]
Length = 207
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVS 221
++QKGTG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGK+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCAEGKLL 124
Query: 222 LSVSLSL 228
+ SL L
Sbjct: 125 VIDSLKL 131
>gi|157828859|ref|YP_001495101.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933586|ref|YP_001650375.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Iowa]
gi|378721682|ref|YP_005286569.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Colombia]
gi|378723029|ref|YP_005287915.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Arizona]
gi|378724383|ref|YP_005289267.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Hauke]
gi|379016071|ref|YP_005292306.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Brazil]
gi|379018168|ref|YP_005294403.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Hino]
gi|166199858|sp|A8GT68.1|RL4_RICRS RecName: Full=50S ribosomal protein L4
gi|189042881|sp|B0BUQ9.1|RL4_RICRO RecName: Full=50S ribosomal protein L4
gi|157801340|gb|ABV76593.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908673|gb|ABY72969.1| LSU ribosomal protein L1E (= L4P) [Rickettsia rickettsii str. Iowa]
gi|376324595|gb|AFB21835.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Brazil]
gi|376326706|gb|AFB23945.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Colombia]
gi|376328053|gb|AFB25291.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Arizona]
gi|376330734|gb|AFB27970.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Hino]
gi|376333398|gb|AFB30631.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Hauke]
Length = 207
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVS 221
++QKGTG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGK+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCAEGKLL 124
Query: 222 LSVSLSL 228
+ SL L
Sbjct: 125 VIDSLKL 131
>gi|238650971|ref|YP_002916827.1| 50S ribosomal protein L4 [Rickettsia peacockii str. Rustic]
gi|379019482|ref|YP_005295716.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Hlp#2]
gi|259491568|sp|C4K2H8.1|RL4_RICPU RecName: Full=50S ribosomal protein L4
gi|238625069|gb|ACR47775.1| 50S ribosomal protein L4 [Rickettsia peacockii str. Rustic]
gi|376332062|gb|AFB29296.1| 50S ribosomal protein L4 [Rickettsia rickettsii str. Hlp#2]
Length = 207
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVS 221
++QKGTG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGK+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCAEGKLL 124
Query: 222 LSVSLSL 228
+ SL L
Sbjct: 125 VIDSLKL 131
>gi|15892928|ref|NP_360642.1| 50S ribosomal protein L4 [Rickettsia conorii str. Malish 7]
gi|34581370|ref|ZP_00142850.1| 50S ribosomal protein L4 [Rickettsia sibirica 246]
gi|374319602|ref|YP_005066101.1| 50S ribosomal protein L4 [Rickettsia slovaca 13-B]
gi|383484334|ref|YP_005393247.1| 50S ribosomal protein L4 [Rickettsia parkeri str. Portsmouth]
gi|383751644|ref|YP_005426745.1| 50S ribosomal protein L4 [Rickettsia slovaca str. D-CWPP]
gi|46577283|sp|Q92GW7.1|RL4_RICCN RecName: Full=50S ribosomal protein L4
gi|15620120|gb|AAL03543.1| 50S ribosomal protein L4 [Rickettsia conorii str. Malish 7]
gi|28262755|gb|EAA26259.1| 50S ribosomal protein L4 [Rickettsia sibirica 246]
gi|360042151|gb|AEV92533.1| 50S ribosomal protein L4 [Rickettsia slovaca 13-B]
gi|378936688|gb|AFC75188.1| 50S ribosomal protein L4 [Rickettsia parkeri str. Portsmouth]
gi|379774658|gb|AFD20014.1| 50S ribosomal protein L4 [Rickettsia slovaca str. D-CWPP]
Length = 207
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVS 221
++QKGTG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGK+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCAEGKLL 124
Query: 222 LSVSLSL 228
+ SL L
Sbjct: 125 VIDSLKL 131
>gi|379712749|ref|YP_005301088.1| 50S ribosomal protein L4 [Rickettsia philipii str. 364D]
gi|376329394|gb|AFB26631.1| 50S ribosomal protein L4 [Rickettsia philipii str. 364D]
Length = 207
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVS 221
++QKGTG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGK+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCAEGKLL 124
Query: 222 LSVSLSL 228
+ SL L
Sbjct: 125 VIDSLKL 131
>gi|229587008|ref|YP_002845509.1| 50S ribosomal protein L4 [Rickettsia africae ESF-5]
gi|259491567|sp|C3PPA6.1|RL4_RICAE RecName: Full=50S ribosomal protein L4
gi|228022058|gb|ACP53766.1| 50S ribosomal protein L4 [Rickettsia africae ESF-5]
Length = 207
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 108 NEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKG 166
NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEV GT KKP++QKG
Sbjct: 10 NEEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKPFKQKG 69
Query: 167 TGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSL 226
TG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGK+ + SL
Sbjct: 70 TGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCAEGKLLVIDSL 129
Query: 227 SL 228
L
Sbjct: 130 KL 131
>gi|90417762|ref|ZP_01225674.1| ribosomal protein L4 [Aurantimonas manganoxydans SI85-9A1]
gi|90337434|gb|EAS51085.1| ribosomal protein L4 [Aurantimonas manganoxydans SI85-9A1]
Length = 206
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 83/120 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + + +D G LA D+F + R+DI+ R+VRWQLAKRQQG+H T +E++ TG K
Sbjct: 3 VTIKSLDGKDAGTATLADDIFGLEPREDILQRMVRWQLAKRQQGSHQTLGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
+RQKGTGRARHG+ R PQFRGG HGP RSHA L KKVR L L+ ALSA+A G +
Sbjct: 63 LYRQKGTGRARHGSARAPQFRGGGKAHGPVSRSHAHDLPKKVRALALRHALSAKAKSGGI 122
>gi|301118172|ref|XP_002906814.1| 50S ribosomal protein L4 [Phytophthora infestans T30-4]
gi|262108163|gb|EEY66215.1| 50S ribosomal protein L4 [Phytophthora infestans T30-4]
Length = 277
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 87/120 (72%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
+D G + + G+VF P R DI+ RVVRWQLA R+ GT+ TKT SEVSG+ +KPW+QKG+G
Sbjct: 80 QDLGSISMDGEVFGAPDRVDILQRVVRWQLACRRAGTNKTKTRSEVSGSTRKPWKQKGSG 139
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G +R PQ+RGG +HGP R + L KKVR +GL++ALS + EGK+++ SL +
Sbjct: 140 RARVGDIRAPQWRGGYRVHGPVLRDFSYSLPKKVRAMGLRVALSTKLREGKLAIVDSLDV 199
>gi|242278659|ref|YP_002990788.1| 50S ribosomal protein L4 [Desulfovibrio salexigens DSM 2638]
gi|259491552|sp|C6C186.1|RL4_DESAD RecName: Full=50S ribosomal protein L4
gi|242121553|gb|ACS79249.1| ribosomal protein L4/L1e [Desulfovibrio salexigens DSM 2638]
Length = 206
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 92/128 (71%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + ++ G M LA +VF+VP++ +I+H VVR QLA ++QGTH+TKT G G K
Sbjct: 4 ITIYDQTKKEVGSMDLAPEVFEVPVKPEILHLVVRSQLAAKRQGTHATKTRGMKRGGGAK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ R P +RGG T GP+PR ++ K+NKKVRRL LK+AL++R +E K+
Sbjct: 64 PWRQKGTGRARAGSTRSPLWRGGGTTFGPQPRDYSFKVNKKVRRLALKMALTSRLSEEKM 123
Query: 221 SLSVSLSL 228
+ ++ L
Sbjct: 124 MVVKNIDL 131
>gi|407976941|ref|ZP_11157836.1| 50S ribosomal protein L4 [Nitratireductor indicus C115]
gi|407427668|gb|EKF40357.1| 50S ribosomal protein L4 [Nitratireductor indicus C115]
Length = 206
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 82/115 (71%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ VT D G + L+ ++F + R+DI+HRVVRWQLAK+Q GTH TK +E++ TG K
Sbjct: 3 LKVTTLAGADAGKLKLSDEIFGLDPREDILHRVVRWQLAKKQAGTHKTKGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
++QKGTGRARH + R PQFRGG HGP RSHA L KKVR LGLK ALSA+A
Sbjct: 63 MYKQKGTGRARHSSARVPQFRGGGKAHGPVVRSHAHDLPKKVRALGLKHALSAKA 117
>gi|348688832|gb|EGZ28646.1| hypothetical protein PHYSODRAFT_552366 [Phytophthora sojae]
Length = 277
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 88/121 (72%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
+++ G + + G+VF P R DI+ RVVRWQLA R+ GT+ TKT SEVSG+ +KPW+QKG+
Sbjct: 79 SQELGTVTMDGEVFGAPDRVDILQRVVRWQLACRRAGTNKTKTRSEVSGSTRKPWKQKGS 138
Query: 168 GRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLS 227
GRAR G +R PQ+RGG +HGP R + L KKVR +GL++ALS + EGK+++ SL
Sbjct: 139 GRARVGDIRAPQWRGGYRVHGPVLRDFSYNLPKKVRAMGLRVALSTKLREGKLAVVDSLD 198
Query: 228 L 228
+
Sbjct: 199 V 199
>gi|162149173|ref|YP_001603634.1| 50S ribosomal protein L4 [Gluconacetobacter diazotrophicus PAl 5]
gi|209545083|ref|YP_002277312.1| 50S ribosomal protein L4 [Gluconacetobacter diazotrophicus PAl 5]
gi|189029506|sp|A9H3R2.1|RL4_GLUDA RecName: Full=50S ribosomal protein L4
gi|161787750|emb|CAP57346.1| 50S ribosomal protein L4 [Gluconacetobacter diazotrophicus PAl 5]
gi|209532760|gb|ACI52697.1| ribosomal protein L4/L1e [Gluconacetobacter diazotrophicus PAl 5]
Length = 204
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 79/118 (66%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G VL ++F V R DI+ RVV WQLAKR+ GTH K + EVSGT KKP+
Sbjct: 5 IKTLDNGSAGTAVLPDEIFGVTPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RQKGTG AR G+LR PQ+R G +HGP R H L KKVRRLGL ALS +AAEGK+
Sbjct: 65 RQKGTGSARQGSLRAPQYRTGGAVHGPVVRDHGYDLPKKVRRLGLISALSQKAAEGKL 122
>gi|319783321|ref|YP_004142797.1| 50S ribosomal protein L4 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169209|gb|ADV12747.1| ribosomal protein L4/L1e [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 206
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 87/128 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L+ ++F + R+DI+ RVVRWQLAK+QQGTH TK +E++ TG K
Sbjct: 3 LKITTLGGKDAGKVELSDEIFGLDPREDILQRVVRWQLAKKQQGTHKTKGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
++QKGTGRARH + R PQFRGG HGP RSH +L KKVR LGLK ALSA+A +
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHELPKKVRALGLKHALSAKAKSASI 122
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 123 IIIDELKL 130
>gi|383482518|ref|YP_005391432.1| 50S ribosomal protein L4 [Rickettsia montanensis str. OSU 85-930]
gi|378934872|gb|AFC73373.1| 50S ribosomal protein L4 [Rickettsia montanensis str. OSU 85-930]
Length = 207
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 108 NEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKG 166
NE+ G + L D+F V IR DI+ +V+ WQ AK G H TKT+SEV GT KKP++QKG
Sbjct: 10 NEEVGEISLNEDIFAVEFIRDDIVKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKPFKQKG 69
Query: 167 TGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSL 226
TG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGK+ + SL
Sbjct: 70 TGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKFAEGKLLVIDSL 129
Query: 227 SL 228
L
Sbjct: 130 KL 131
>gi|157826062|ref|YP_001493782.1| 50S ribosomal protein L4 [Rickettsia akari str. Hartford]
gi|166199855|sp|A8GPE9.1|RL4_RICAH RecName: Full=50S ribosomal protein L4
gi|157800020|gb|ABV75274.1| 50S ribosomal protein L4 [Rickettsia akari str. Hartford]
Length = 207
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 108 NEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKG 166
NE+ G + L D+F V IR D+I +V+ WQ AK G H TKT+SEVSGT KKP++QKG
Sbjct: 10 NEEVGEISLNEDIFAVEFIRDDVIKQVIDWQRAKAMSGNHKTKTVSEVSGTTKKPFKQKG 69
Query: 167 TGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSL 226
TG AR G+LR Q RGG HGP+ RSH KL KKVR+LGL ALS + AEG++ + SL
Sbjct: 70 TGNARQGSLRSVQMRGGGVAHGPRVRSHVTKLPKKVRKLGLIHALSEKFAEGRLLVIDSL 129
Query: 227 SL 228
L
Sbjct: 130 KL 131
>gi|157804034|ref|YP_001492583.1| 50S ribosomal protein L4 [Rickettsia canadensis str. McKiel]
gi|379023181|ref|YP_005299842.1| 50S ribosomal protein L4 [Rickettsia canadensis str. CA410]
gi|166199857|sp|A8EZL5.1|RL4_RICCK RecName: Full=50S ribosomal protein L4
gi|157785297|gb|ABV73798.1| 50S ribosomal protein L4 [Rickettsia canadensis str. McKiel]
gi|376324119|gb|AFB21360.1| 50S ribosomal protein L4 [Rickettsia canadensis str. CA410]
Length = 207
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 108 NEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKG 166
NE+ G + L D+F V IR DII +V+ WQ AK G H TKT+SEVSGT KKP++QKG
Sbjct: 10 NEEVGEISLNKDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVSGTTKKPFKQKG 69
Query: 167 TGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSL 226
TG AR G+LR Q RGG HGP RSHA +L KKVR+LGL ALS + AEGK+ + SL
Sbjct: 70 TGNARQGSLRSVQMRGGGLAHGPIVRSHATQLPKKVRKLGLIHALSEKFAEGKLLVIDSL 129
Query: 227 SL 228
L
Sbjct: 130 KL 131
>gi|426404881|ref|YP_007023852.1| 50S ribosomal protein L4 [Bdellovibrio bacteriovorus str. Tiberius]
gi|425861549|gb|AFY02585.1| 50S ribosomal protein L4 [Bdellovibrio bacteriovorus str. Tiberius]
Length = 209
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 88/127 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N+ E G + LA DVF+ P++K+++H VV+WQLA R+QGTH TKT VSG GKK
Sbjct: 4 VNVLNWKKEKVGSVELAADVFETPVKKEVLHTVVQWQLAARRQGTHMTKTKGLVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P++QKGTG AR G+ R GG T GP+PRS+A L KKVRRLGL +ALS EGK+
Sbjct: 64 PFKQKGTGGARQGSSRSILMPGGGTAFGPQPRSYAFVLPKKVRRLGLSMALSHLQKEGKL 123
Query: 221 SLSVSLS 227
+ S++
Sbjct: 124 FIVDSMA 130
>gi|258513641|ref|YP_003189863.1| 50S ribosomal protein L4 [Desulfotomaculum acetoxidans DSM 771]
gi|257777346|gb|ACV61240.1| ribosomal protein L4/L1e [Desulfotomaculum acetoxidans DSM 771]
Length = 206
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 87/133 (65%), Gaps = 3/133 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN E G + L +VF + + + ++H V QLA R+QGTH TKT EV G
Sbjct: 1 MPTVALFNIKGEQVGEVALKDEVFGIEVNESVLHDAVVMQLAGRRQGTHDTKTRGEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRARHGT+R P +RGG + GP PR++ KL KKVRRL LK ALS++
Sbjct: 61 GKKPWRQKGTGRARHGTIRSPIWRGGGIVFGPHPRTYKYKLPKKVRRLALKSALSSKVLA 120
Query: 218 GKVSLSVSLSLFL 230
G + + +LS+ +
Sbjct: 121 GNIKVLDALSMEM 133
>gi|42524374|ref|NP_969754.1| 50S ribosomal protein L4 [Bdellovibrio bacteriovorus HD100]
gi|46576695|sp|P61061.1|RL4_BDEBA RecName: Full=50S ribosomal protein L4
gi|39576583|emb|CAE80747.1| 50S ribosomal protein L4 [Bdellovibrio bacteriovorus HD100]
Length = 209
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 88/127 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N+ E G + LA DVF+ P++K+++H VV+WQLA R+QGTH TKT VSG GKK
Sbjct: 4 VNVLNWKKEKVGSVELAADVFETPVKKEVLHTVVQWQLAARRQGTHMTKTKGLVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P++QKGTG AR G+ R GG T GP+PRS+A L KKVRRLGL +ALS EGK+
Sbjct: 64 PFKQKGTGGARQGSSRSILMPGGGTAFGPQPRSYAFVLPKKVRRLGLSMALSHLQKEGKL 123
Query: 221 SLSVSLS 227
+ S++
Sbjct: 124 FIVDSMA 130
>gi|58584598|ref|YP_198171.1| 50S ribosomal protein L4 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|75497927|sp|Q5GSU5.1|RL4_WOLTR RecName: Full=50S ribosomal protein L4
gi|58418914|gb|AAW70929.1| Ribosomal protein L4 [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 204
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 86/131 (65%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N N D G L +F V + I+H +VRWQLAKR+ GTH K IS+VSGT KP+
Sbjct: 5 LVNLSNNDVGTTQLNPLIFSVEQKLSILHDIVRWQLAKRRAGTHKVKGISDVSGTTAKPY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
QK TGRAR G+LR PQFRGG + GP RSHA LNKKVR+ GLK+ALS + +V +
Sbjct: 65 SQKRTGRARQGSLRSPQFRGGGVIFGPIVRSHAYSLNKKVRKFGLKVALSLKYLNNQVII 124
Query: 223 SVSLSLFLRPS 233
+L++ ++ +
Sbjct: 125 LNNLNINVKKT 135
>gi|77555479|gb|ABA98275.1| ribosomal protein L4/L1 family protein [Oryza sativa Japonica
Group]
Length = 288
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 100/160 (62%), Gaps = 17/160 (10%)
Query: 64 TTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKG---FMVLAGDV 120
+T++TP S E P +LL +TV TP+ IG ++DLV +TNF + +MV+
Sbjct: 53 STLVTP-SDEVLVPPELLSSRTVGTPERKIGQYEDLVARITNFTMRIRATWCWMVMY--- 108
Query: 121 FDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQF 180
++ + R + G + + KP++QKGTGRARHGTLRGPQF
Sbjct: 109 --------LMFQSGRTLFIELYVGNLLNG--NSILCIYIKPYKQKGTGRARHGTLRGPQF 158
Query: 181 RGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RGG TMHGPKPRSHAIKL KKVRRLGLKIALSAR AEGK+
Sbjct: 159 RGGATMHGPKPRSHAIKLQKKVRRLGLKIALSARTAEGKL 198
>gi|58617355|ref|YP_196554.1| 50S ribosomal protein L4 [Ehrlichia ruminantium str. Gardel]
gi|75432695|sp|Q5FFU1.1|RL4_EHRRG RecName: Full=50S ribosomal protein L4
gi|58416967|emb|CAI28080.1| 50S ribosomal protein L4 [Ehrlichia ruminantium str. Gardel]
Length = 205
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 82/120 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N +++ G + L +F V R DI+ VV WQL+KR+ G H TKTI +VSGT K
Sbjct: 3 VNVINIESQNIGKIDLNPLIFSVNYRPDILKMVVEWQLSKRRVGAHKTKTIGDVSGTTAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQK TGRAR G+LR PQFRGG + GP RSHA LNKKVR LGLK+ALS + + K+
Sbjct: 63 PYRQKHTGRARQGSLRSPQFRGGAVIFGPVVRSHAYSLNKKVRNLGLKVALSLKNSCNKL 122
>gi|383312961|ref|YP_005365762.1| 50S ribosomal protein L4 [Candidatus Rickettsia amblyommii str.
GAT-30V]
gi|378931621|gb|AFC70130.1| 50S ribosomal protein L4 [Candidatus Rickettsia amblyommii str.
GAT-30V]
Length = 207
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 108 NEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKG 166
NE+ G + L D+F V IR+DII +V+ WQ AK G H TKT+SEV GT KKP++QKG
Sbjct: 10 NEEVGEISLNEDIFAVEFIREDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKPFKQKG 69
Query: 167 TGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSL 226
TG AR G+LR Q RGG HGP+ RSHA L KKVR+LGL ALS + AEGK+ + SL
Sbjct: 70 TGNARQGSLRSVQMRGGGVAHGPRVRSHATTLPKKVRKLGLIHALSEKFAEGKLLVIDSL 129
Query: 227 SL 228
L
Sbjct: 130 KL 131
>gi|333980408|ref|YP_004518353.1| 50S ribosomal protein L4 [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823889|gb|AEG16552.1| ribosomal protein L4/L1e [Desulfotomaculum kuznetsovii DSM 6115]
Length = 208
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 85/128 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L DVF VP+ ++H V WQLA R+ GTH TKT +EV G G+K
Sbjct: 4 VAVYNINGDQVGEIHLRDDVFGVPVHMSVLHDAVVWQLAGRRLGTHDTKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRARHG++R P +R G + GP PR ++ +L +KVRRL +K ALSA+ +GK+
Sbjct: 64 PWRQKGTGRARHGSIRSPLWRKGGIVFGPHPRDYSYRLPRKVRRLAMKSALSAKVQDGKI 123
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 124 VVLEDLKL 131
>gi|414342981|ref|YP_006984502.1| protein RplD [Gluconobacter oxydans H24]
gi|411028316|gb|AFW01571.1| RplD [Gluconobacter oxydans H24]
gi|453330316|dbj|GAC87544.1| 50S ribosomal protein L4 [Gluconobacter thailandicus NBRC 3255]
Length = 204
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 80/118 (67%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G + L ++F V R DI+ RVV WQLAKR+ GTH TK + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGSVALPEEIFAVSPRADIMARVVHWQLAKRRAGTHRTKGMGEISGTTKKPF 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RQKGTG AR G+LR PQFR G +HGP R H L KKVRRLGL ALS +AA+GK+
Sbjct: 65 RQKGTGSARQGSLRAPQFRTGGVVHGPVVRDHGYDLPKKVRRLGLISALSQKAADGKL 122
>gi|436842983|ref|YP_007327361.1| ribosomal protein L4 [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432171889|emb|CCO25262.1| ribosomal protein L4 [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 206
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 91/128 (71%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + N++ G M LA +VF+VP++ +I+H VVR QLA ++ GTH+TKT G G K
Sbjct: 4 ITIYDQTNKEVGSMDLAPEVFEVPVKPEILHLVVRSQLAAKRSGTHATKTRGMKRGGGAK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ R P +RGG T GP+PR ++ K+NKKVR L LK+AL+++ +E K+
Sbjct: 64 PWRQKGTGRARAGSTRSPLWRGGGTTFGPQPRDYSFKVNKKVRALALKMALTSKLSEEKL 123
Query: 221 SLSVSLSL 228
+ S+ L
Sbjct: 124 MVVKSIDL 131
>gi|281206127|gb|EFA80316.1| hypothetical protein PPL_07147 [Polysphondylium pallidum PN500]
Length = 318
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
Query: 101 IPVTNFFN-EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
+PV NF + E+ G + L +F VP+R DI+HR+VRWQ AK QGTH + + ++ T K
Sbjct: 111 VPVVNFKSKENVGEIQLLKSIFSVPLRVDILHRIVRWQRAKAMQGTHYAQNMGDIDRTNK 170
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
KP+ QKGTGRAR GT Q +GG PKPR H+ L KKVRRLGLK+AL+ + A+ K
Sbjct: 171 KPFSQKGTGRARQGTNHAIQMKGGARAFPPKPRDHSFSLPKKVRRLGLKVALATKLAQNK 230
Query: 220 VSLSVSLSL 228
+ + +L L
Sbjct: 231 LVIVENLEL 239
>gi|410943569|ref|ZP_11375310.1| 50S ribosomal protein L4 [Gluconobacter frateurii NBRC 101659]
Length = 204
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 80/118 (67%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G + L ++F V R DI+ RVV WQLAKR+ GTH TK + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGSVALPEEIFAVSPRADIMARVVHWQLAKRRAGTHRTKGMGEISGTTKKPF 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RQKGTG AR G+LR PQFR G +HGP R H L KKVRRLGL ALS +AA+GK+
Sbjct: 65 RQKGTGSARQGSLRAPQFRTGGVVHGPVVRDHGYDLPKKVRRLGLISALSQKAADGKL 122
>gi|337288311|ref|YP_004627783.1| 50S ribosomal protein L4/L1e [Thermodesulfobacterium sp. OPB45]
gi|334902049|gb|AEH22855.1| ribosomal protein L4/L1e [Thermodesulfobacterium geofontis OPF15]
Length = 210
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 88/129 (68%), Gaps = 1/129 (0%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D++ V + ++H VVRWQ+A+ + GT TKT EV G G+KPW QK TGRAR
Sbjct: 17 GEIELPSDLYGVTPKVGLLHEVVRWQMARWRAGTACTKTRGEVRGGGRKPWPQKHTGRAR 76
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G++R PQ+ GG +HGPKPRS+ KLNKKVRRLGLK+ALS+RA KV ++ + +
Sbjct: 77 QGSIRAPQWVGGGVVHGPKPRSYEFKLNKKVRRLGLKMALSSRALANKVYVAEDFPVKDK 136
Query: 232 PSFSLSLKN 240
P + LKN
Sbjct: 137 PKTKV-LKN 144
>gi|157964805|ref|YP_001499629.1| 50S ribosomal protein L4 [Rickettsia massiliae MTU5]
gi|157844581|gb|ABV85082.1| 50S ribosomal protein L4 [Rickettsia massiliae MTU5]
Length = 209
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
V + N++ G + L ++F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 7 VLSLANKEVGEISLNENIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 66
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVS 221
++QKGTG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGK+
Sbjct: 67 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCAEGKLL 126
Query: 222 LSVSLSL 228
+ SL L
Sbjct: 127 VIDSLKL 133
>gi|297613186|ref|NP_001066789.2| Os12g0488600 [Oryza sativa Japonica Group]
gi|255670313|dbj|BAF29808.2| Os12g0488600 [Oryza sativa Japonica Group]
Length = 346
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 100/160 (62%), Gaps = 17/160 (10%)
Query: 64 TTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKG---FMVLAGDV 120
+T++TP S E P +LL +TV TP+ IG ++DLV +TNF + +MV+
Sbjct: 88 STLVTP-SDEVLVPPELLSSRTVGTPERKIGQYEDLVARITNFTMRIRATWCWMVMY--- 143
Query: 121 FDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQF 180
++ + R + G + + KP++QKGTGRARHGTLRGPQF
Sbjct: 144 --------LMFQSGRTLFIELYVGNLLNG--NSILCIYIKPYKQKGTGRARHGTLRGPQF 193
Query: 181 RGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RGG TMHGPKPRSHAIKL KKVRRLGLKIALSAR AEGK+
Sbjct: 194 RGGATMHGPKPRSHAIKLQKKVRRLGLKIALSARTAEGKL 233
>gi|357032625|ref|ZP_09094560.1| 50S ribosomal protein L4 [Gluconobacter morbifer G707]
gi|356413616|gb|EHH67268.1| 50S ribosomal protein L4 [Gluconobacter morbifer G707]
Length = 204
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 79/118 (66%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G + L ++F V R D++ RVV WQLAKR+ GTH TK + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGTVALPEEIFAVSPRADLMARVVHWQLAKRRAGTHRTKGMGEISGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RQKGTG AR G+LR PQFR G +HGP R H L KKVRRLGL ALS +A EGK+
Sbjct: 65 RQKGTGSARQGSLRAPQFRTGGVVHGPVVRDHGYDLPKKVRRLGLISALSQKATEGKL 122
>gi|329114216|ref|ZP_08242978.1| 50S ribosomal protein L4 [Acetobacter pomorum DM001]
gi|326696292|gb|EGE47971.1| 50S ribosomal protein L4 [Acetobacter pomorum DM001]
Length = 204
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 79/122 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I + N G L ++F V R DI+ RVV WQLAKR+ GTH K + EVSGT
Sbjct: 1 MEIEIKTLDNSSAGSATLPDEIFAVAPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTT 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTG AR G+LR PQ+R G +HGP R H L KKVRRLGL ALS +A +G
Sbjct: 61 KKPYRQKGTGSARQGSLRAPQYRTGGAVHGPVVRDHGYDLPKKVRRLGLISALSQKAKDG 120
Query: 219 KV 220
K+
Sbjct: 121 KL 122
>gi|426400733|ref|YP_007019705.1| 50S ribosomal protein L4/L1 family protein [Candidatus
Endolissoclinum patella L2]
gi|425857401|gb|AFX98437.1| ribosomal L4/L1 family protein [Candidatus Endolissoclinum patella
L2]
Length = 206
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 82/120 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + + L +F + RKDI+ RVV WQLAKR+ G H K ISE+SGT KK
Sbjct: 3 IDVINLDAKKTDEIYLDESIFGLETRKDILTRVVNWQLAKRRSGNHKIKGISEISGTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G++R FRGG T+HGP RSH +L KK R+LGL+IALS + +G++
Sbjct: 63 PFRQKGTGRARQGSMRATHFRGGQTVHGPVVRSHRQQLTKKFRKLGLRIALSTKFKDGQL 122
>gi|258542028|ref|YP_003187461.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-01]
gi|384041949|ref|YP_005480693.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-12]
gi|384050464|ref|YP_005477527.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-03]
gi|384053574|ref|YP_005486668.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-07]
gi|384056806|ref|YP_005489473.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-22]
gi|384059447|ref|YP_005498575.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-26]
gi|384062741|ref|YP_005483383.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-32]
gi|384118817|ref|YP_005501441.1| 50S ribosomal protein L4 [Acetobacter pasteurianus IFO 3283-01-42C]
gi|421848614|ref|ZP_16281601.1| LSU ribosomal protein L4P [Acetobacter pasteurianus NBRC 101655]
gi|421851615|ref|ZP_16284308.1| LSU ribosomal protein L4P [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|256633106|dbj|BAH99081.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO 3283-01]
gi|256636163|dbj|BAI02132.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO 3283-03]
gi|256639218|dbj|BAI05180.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO 3283-07]
gi|256642272|dbj|BAI08227.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO 3283-22]
gi|256645327|dbj|BAI11275.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO 3283-26]
gi|256648382|dbj|BAI14323.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO 3283-32]
gi|256651435|dbj|BAI17369.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654426|dbj|BAI20353.1| LSU ribosomal protein L4P [Acetobacter pasteurianus IFO 3283-12]
gi|371460494|dbj|GAB26804.1| LSU ribosomal protein L4P [Acetobacter pasteurianus NBRC 101655]
gi|371480118|dbj|GAB29511.1| LSU ribosomal protein L4P [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 204
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 79/122 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I + N G L ++F V R DI+ RVV WQLAKR+ GTH K + EVSGT
Sbjct: 1 MEIEIKTLDNSSAGSATLPDEIFAVAPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTT 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTG AR G+LR PQ+R G +HGP R H L KKVRRLGL ALS +A +G
Sbjct: 61 KKPYRQKGTGSARQGSLRAPQYRTGGAVHGPVVRDHGYDLPKKVRRLGLISALSQKAKDG 120
Query: 219 KV 220
K+
Sbjct: 121 KL 122
>gi|317153957|ref|YP_004122005.1| 50S ribosomal protein L4 [Desulfovibrio aespoeensis Aspo-2]
gi|316944208|gb|ADU63259.1| ribosomal protein L4/L1e [Desulfovibrio aespoeensis Aspo-2]
Length = 206
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 92/128 (71%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + N+ G + LA +VF+V I+ +I++ VVR Q A ++ GTH+TKT SG G+K
Sbjct: 4 LQVVDQNNQKVGDIELAPEVFEVEIQPEILNLVVRAQRAAKRSGTHATKTRGMKSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ R P +RGG + GP+PR ++ K+NKK+R+L L++ALS+R AE KV
Sbjct: 64 PWRQKGTGRARAGSSRSPLWRGGAVLFGPQPRDYSFKVNKKIRKLALQMALSSRVAEDKV 123
Query: 221 SLSVSLSL 228
++ S+ L
Sbjct: 124 TVVKSIDL 131
>gi|383481895|ref|YP_005390810.1| 50S ribosomal protein L4 [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|378934234|gb|AFC72737.1| 50S ribosomal protein L4 [Rickettsia rhipicephali str.
3-7-female6-CWPP]
Length = 207
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 85/127 (66%), Gaps = 1/127 (0%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + N++ G + L D+F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANKEVGEISLNEDIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVS 221
++QKGTG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + EGK+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCTEGKLL 124
Query: 222 LSVSLSL 228
+ SL L
Sbjct: 125 VIDSLKL 131
>gi|78357299|ref|YP_388748.1| 50S ribosomal protein L4 [Desulfovibrio alaskensis G20]
gi|109893592|sp|Q30Z43.1|RL4_DESDG RecName: Full=50S ribosomal protein L4
gi|78219704|gb|ABB39053.1| ribosomal protein L4/L1e [Desulfovibrio alaskensis G20]
Length = 206
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 87/120 (72%), Gaps = 3/120 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+ V +++DK G + LA +VF+V +R +I++ VVR Q A ++ GTHS KT S +SG
Sbjct: 1 MAVVKVYDQDKKETGELTLAPEVFEVEVRPEILNLVVRAQRAAKRAGTHSVKTRSTISGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G KPWRQKGTGRAR G+ R P +RGG + GP+PR ++ K+NKKVR+L LK+ALS+R AE
Sbjct: 61 GAKPWRQKGTGRARSGSNRSPVWRGGAVVFGPQPRDYSFKVNKKVRKLALKMALSSRLAE 120
>gi|379713549|ref|YP_005301887.1| 50S ribosomal protein L4 [Rickettsia massiliae str. AZT80]
gi|376334195|gb|AFB31427.1| 50S ribosomal protein L4 [Rickettsia massiliae str. AZT80]
Length = 207
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + N++ G + L ++F V IR DII +V+ WQ AK G H TKT+SEV GT KKP
Sbjct: 5 ILSLANKEVGEISLNENIFAVEFIRDDIIKQVIDWQRAKAMSGNHKTKTVSEVLGTTKKP 64
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVS 221
++QKGTG AR G+LR Q RGG HGP+ RSHA KL KKVR+LGL ALS + AEGK+
Sbjct: 65 FKQKGTGNARQGSLRSVQMRGGGVAHGPRVRSHATKLPKKVRKLGLIHALSEKCAEGKLL 124
Query: 222 LSVSLSL 228
+ SL L
Sbjct: 125 VIDSLKL 131
>gi|410464304|ref|ZP_11317750.1| 50S ribosomal protein L4, bacterial/organelle [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409982555|gb|EKO38998.1| 50S ribosomal protein L4, bacterial/organelle [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 210
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 88/122 (72%), Gaps = 3/122 (2%)
Query: 104 TNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
FN+ + G + LA +VF+V ++ +++H VVR QLA ++ GTHS KT + VSG GKK
Sbjct: 4 VKLFNQGCQEIGTVDLAPEVFEVEVQPELLHLVVRAQLAAKRAGTHSVKTRAYVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ R P +RGG +HGP+PR + K+N+KVR+L L++ALSA+ E ++
Sbjct: 64 PWRQKGTGRARAGSTRSPLWRGGAVVHGPQPRDYTFKVNRKVRQLALRMALSAKLVEDQL 123
Query: 221 SL 222
L
Sbjct: 124 VL 125
>gi|339018300|ref|ZP_08644438.1| LSU ribosomal protein L4P [Acetobacter tropicalis NBRC 101654]
gi|338752577|dbj|GAA07742.1| LSU ribosomal protein L4P [Acetobacter tropicalis NBRC 101654]
Length = 204
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 89/142 (62%), Gaps = 1/142 (0%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I + N G L ++F V R DI+ RVV WQLAKR+ GTH K +++VSGT
Sbjct: 1 MEIEIKTLDNGTAGSATLPDELFAVAPRADIMARVVHWQLAKRRAGTHQVKGMADVSGTT 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTG AR G+LR PQ+R G +HGP R H L KKVRRLGL ALS +A +G
Sbjct: 61 KKPYRQKGTGSARQGSLRAPQYRTGGVVHGPVSRDHGYDLPKKVRRLGLISALSQKAQDG 120
Query: 219 KVSLSVSLSLFLRPS-FSLSLK 239
K+ + S S R S ++ LK
Sbjct: 121 KLIVLQSASGVARTSELAVKLK 142
>gi|347760287|ref|YP_004867848.1| 50S ribosomal protein L4 [Gluconacetobacter xylinus NBRC 3288]
gi|347579257|dbj|BAK83478.1| LSU ribosomal protein L4P [Gluconacetobacter xylinus NBRC 3288]
Length = 204
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 78/118 (66%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G L ++F V R DI+ RVV WQLAKR+ GTH K + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGTASLPDEIFAVTPRNDIMARVVHWQLAKRRAGTHKVKGMGEISGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RQKGTG AR G+LR PQ+R G +HGP R H L KKVRRLGL ALS +AAEGK+
Sbjct: 65 RQKGTGSARQGSLRSPQYRTGGVVHGPVVRDHGYDLPKKVRRLGLISALSQKAAEGKL 122
>gi|73667227|ref|YP_303243.1| 50S ribosomal protein L4 [Ehrlichia canis str. Jake]
gi|109893593|sp|Q3YRL0.1|RL4_EHRCJ RecName: Full=50S ribosomal protein L4
gi|72394368|gb|AAZ68645.1| LSU ribosomal protein L4P [Ehrlichia canis str. Jake]
Length = 205
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 82/120 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N ++ G + L +F V R DI+ VV WQL+KR+ GTH KTI ++SGT K
Sbjct: 3 VSIINVNSDKIGTIDLNPLIFSVDYRPDILKMVVNWQLSKRRAGTHKAKTIGDISGTTAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQK TGRAR G+LR PQFRGG + GP R+HA LNKKVR+LGLK+ALS + + K+
Sbjct: 63 PYRQKHTGRARQGSLRSPQFRGGAVIFGPVVRNHAYSLNKKVRKLGLKVALSLKNSCNKL 122
>gi|57239335|ref|YP_180471.1| 50S ribosomal protein L4 [Ehrlichia ruminantium str. Welgevonden]
gi|58579301|ref|YP_197513.1| 50S ribosomal protein L4 [Ehrlichia ruminantium str. Welgevonden]
gi|81557285|sp|Q5HAS3.1|RL4_EHRRW RecName: Full=50S ribosomal protein L4
gi|57161414|emb|CAH58338.1| 50S ribosomal protein L4 [Ehrlichia ruminantium str. Welgevonden]
gi|58417927|emb|CAI27131.1| 50S ribosomal protein L4 [Ehrlichia ruminantium str. Welgevonden]
Length = 205
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 82/120 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N +++ G + L +F V R DI+ VV WQL+KR+ G H TKTI +VSGT K
Sbjct: 3 VNVINIESQNIGKIDLNPLIFSVNYRPDILKMVVEWQLSKRRIGAHKTKTIGDVSGTTAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQK TGRAR G+LR PQFRGG + GP R+HA LNKKVR LGLK+ALS + + K+
Sbjct: 63 PYRQKHTGRARQGSLRSPQFRGGAVIFGPVVRTHAYSLNKKVRNLGLKVALSLKNSCNKL 122
>gi|328953157|ref|YP_004370491.1| 50S ribosomal protein L4/L1e [Desulfobacca acetoxidans DSM 11109]
gi|328453481|gb|AEB09310.1| ribosomal protein L4/L1e [Desulfobacca acetoxidans DSM 11109]
Length = 207
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 89/123 (72%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+PV + ++ D+ G + L D+F++P++ I+H VV QLA R+ GT STK SEV G
Sbjct: 1 MPVIDVYDIDRNKVGEVSLRDDIFNIPVQGHILHEVVTMQLACRRAGTASTKGRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G KPWRQKGTGRAR G++R P +RGG + GPKPRS+A K KKVRRL LK+ALS++ A+
Sbjct: 61 GHKPWRQKGTGRARVGSIRSPLWRGGGVVFGPKPRSYAYKPPKKVRRLALKMALSSKLAD 120
Query: 218 GKV 220
G++
Sbjct: 121 GQL 123
>gi|407776106|ref|ZP_11123395.1| 50S ribosomal protein L4 [Thalassospira profundimaris WP0211]
gi|407280822|gb|EKF06389.1| 50S ribosomal protein L4 [Thalassospira profundimaris WP0211]
Length = 206
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 80/109 (73%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + LA D+F + +R+D++HR+V WQLAKR+ GTH K SEVS T KK RQKG+G AR
Sbjct: 14 GKIDLAEDIFGLEVRRDVLHRMVNWQLAKRRAGTHKVKEKSEVSATTKKFVRQKGSGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
HG+ + QFRGG T+HGP+ R HA L KK R+L LK ALSA+A +GK+
Sbjct: 74 HGSRKAAQFRGGGTVHGPRVRDHAHDLTKKFRKLALKTALSAKAKDGKL 122
>gi|288917231|ref|ZP_06411600.1| ribosomal protein L4/L1e [Frankia sp. EUN1f]
gi|288351422|gb|EFC85630.1| ribosomal protein L4/L1e [Frankia sp. EUN1f]
Length = 247
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 88/142 (61%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
D +PV D G + L G VFDVP+ +IH+VV QLA +QGTH TKT EV G
Sbjct: 20 DRTVPVHAPAGGDAGSVELPGAVFDVPLNVPLIHQVVVAQLAAARQGTHDTKTRGEVRGG 79
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KP+RQKGTGRAR G+LR PQF GG +HGPKPR++ + KK++ L+ ALS RA
Sbjct: 80 GRKPYRQKGTGRARQGSLRAPQFTGGGVVHGPKPRNYDQRTPKKMKAAALRGALSDRARN 139
Query: 218 GKVSLSVSLSLFLRPSFSLSLK 239
+V + SL PS + K
Sbjct: 140 DRVHVVSSLVAGDAPSTKAAFK 161
>gi|337269080|ref|YP_004613135.1| 50S ribosomal protein L4/L1e [Mesorhizobium opportunistum WSM2075]
gi|336029390|gb|AEH89041.1| ribosomal protein L4/L1e [Mesorhizobium opportunistum WSM2075]
Length = 206
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 85/128 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L+ ++F + R+DI+ RVVRWQLAK+QQGTH K +E++ TG K
Sbjct: 3 LKITTLGGKDAGKVKLSEEIFGLDPREDILQRVVRWQLAKKQQGTHKAKGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
++QKGTGRARH + R PQFRGG HGP RSH L KKVR LGLK ALSA+A +
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALGLKHALSAKAKSASI 122
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 123 IIIDELKL 130
>gi|386394163|ref|ZP_10078944.1| 50S ribosomal protein L4, bacterial/organelle [Desulfovibrio sp.
U5L]
gi|385735041|gb|EIG55239.1| 50S ribosomal protein L4, bacterial/organelle [Desulfovibrio sp.
U5L]
Length = 210
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 89/121 (73%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
N++ G + L +VF+V ++ +++H VVR QLA ++ GTHS KT + VSG GKKPWRQKGT
Sbjct: 11 NQEIGTVELDPEVFEVEVQPELLHLVVRAQLAAKRAGTHSVKTRAFVSGGGKKPWRQKGT 70
Query: 168 GRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLS 227
GRAR G+ R P +RGG +HGP+PR + K+N+KVR+L L++ALSA+ + + L SL+
Sbjct: 71 GRARAGSTRSPLWRGGAVVHGPEPRDYTFKVNRKVRQLALRMALSAKLGDASLVLVDSLA 130
Query: 228 L 228
+
Sbjct: 131 V 131
>gi|395786491|ref|ZP_10466218.1| 50S ribosomal protein L4 [Bartonella tamiae Th239]
gi|423716616|ref|ZP_17690806.1| 50S ribosomal protein L4 [Bartonella tamiae Th307]
gi|395422789|gb|EJF88985.1| 50S ribosomal protein L4 [Bartonella tamiae Th239]
gi|395428690|gb|EJF94765.1| 50S ribosomal protein L4 [Bartonella tamiae Th307]
Length = 206
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 86/128 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + ++ G + L+ VF + R+DI+ RVVRWQLA+RQQGTH T++ ++VS TG K
Sbjct: 3 LNIMTLEGKETGKVTLSDAVFGLDPREDILQRVVRWQLARRQQGTHQTQSRADVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
++QKGTGRARH + R PQFRGG HGP RSHA L KKVR LGL+ ALSA+ +
Sbjct: 63 MYKQKGTGRARHSSARAPQFRGGGKAHGPVARSHAHDLPKKVRALGLRFALSAKLKSNDL 122
Query: 221 SLSVSLSL 228
+ LSL
Sbjct: 123 IIVDDLSL 130
>gi|116748991|ref|YP_845678.1| 50S ribosomal protein L4 [Syntrophobacter fumaroxidans MPOB]
gi|166199918|sp|A0LIJ1.1|RL4_SYNFM RecName: Full=50S ribosomal protein L4
gi|116698055|gb|ABK17243.1| LSU ribosomal protein L4P [Syntrophobacter fumaroxidans MPOB]
Length = 207
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 92/131 (70%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + FN ++ G + L+ VF VP+R ++H VV +QLAKR+ GT TK S+V+G
Sbjct: 1 MPTVDIFNTNRDVVGQLELSDAVFAVPLRPHVLHEVVLYQLAKRRAGTVKTKGRSDVAGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRAR GT R P +RGG T+HGP+PR + +++ KKVRRL +K+ALS + +
Sbjct: 61 GKKPWRQKGTGRARAGTSRSPIWRGGGTIHGPQPRDYEMRIPKKVRRLAVKMALSQKLID 120
Query: 218 GKVSLSVSLSL 228
++++ L L
Sbjct: 121 RELTVLDQLQL 131
>gi|389866517|ref|YP_006368758.1| 50S ribosomal protein L4 [Modestobacter marinus]
gi|388488721|emb|CCH90299.1| 50S ribosomal protein L4 [Modestobacter marinus]
Length = 266
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 90/145 (62%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
D +PV N E G + L G++FD ++H+VV QLA +QGTHSTKT ++VSGT
Sbjct: 15 DREVPVRNAAGESTGSVTLPGELFDANANVSLMHQVVVAQLAAARQGTHSTKTRAQVSGT 74
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G KP+RQKGTGRAR G+LR PQF GG HGP PR++ K KK++ L+ ALS RA E
Sbjct: 75 GAKPYRQKGTGRARQGSLRAPQFSGGGVSHGPVPRNYDQKTPKKMKAAALRGALSDRARE 134
Query: 218 GKVSLSVSLSLFLRPSFSLSLKNTD 242
+V + + PS ++K D
Sbjct: 135 DRVHVVSAFVEGDAPSTKAAIKVLD 159
>gi|239905859|ref|YP_002952598.1| 50S ribosomal protein L4 [Desulfovibrio magneticus RS-1]
gi|259491554|sp|C4XLX4.1|RL4_DESMR RecName: Full=50S ribosomal protein L4
gi|239795723|dbj|BAH74712.1| 50S ribosomal protein L4 [Desulfovibrio magneticus RS-1]
Length = 210
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 88/122 (72%), Gaps = 3/122 (2%)
Query: 104 TNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
FN+ + G + LA +VF+V ++ +++H VVR QLA ++ GTHS KT + VSG GKK
Sbjct: 4 VKLFNQGCQEIGTVDLAPEVFEVEVQPELLHLVVRAQLAAKRAGTHSVKTRAFVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ R P +RGG +HGP+PR + K+N+KVR+L L++ALSA+ E ++
Sbjct: 64 PWRQKGTGRARAGSTRSPLWRGGAVVHGPQPRDYTFKVNRKVRQLALRMALSAKLVEDQL 123
Query: 221 SL 222
L
Sbjct: 124 VL 125
>gi|317485821|ref|ZP_07944685.1| ribosomal protein L4/L1 family protein [Bilophila wadsworthia
3_1_6]
gi|345887472|ref|ZP_08838652.1| 50S ribosomal protein L4 [Bilophila sp. 4_1_30]
gi|316922927|gb|EFV44149.1| ribosomal protein L4/L1 family protein [Bilophila wadsworthia
3_1_6]
gi|345041781|gb|EGW45910.1| 50S ribosomal protein L4 [Bilophila sp. 4_1_30]
Length = 206
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 86/119 (72%), Gaps = 3/119 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+ V +++DK G + L +VF+V +R +I+H VVR QLA ++ GTHSTKT + VSG
Sbjct: 1 MAVVKVYDQDKTEQGELTLTPEVFEVAVRPEILHLVVRAQLAAKRAGTHSTKTRAMVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
G KPWRQKGTGRAR G+ R P +RGG + GP+PR + K+NKK+R+L L++ALS+R A
Sbjct: 61 GVKPWRQKGTGRARAGSNRSPVWRGGAILFGPQPRKYDFKVNKKIRKLALRMALSSRLA 119
>gi|412987813|emb|CCO19209.1| 50S ribosomal protein L4 [Bathycoccus prasinos]
Length = 340
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 92/151 (60%), Gaps = 14/151 (9%)
Query: 90 DITIGLHQDLVIPV----------TNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLA 139
D+ G +D +P+ + F+E +VL G FDVPIR DI HR VRWQLA
Sbjct: 99 DVEQGEMRDKTVPIHASAHIIEEKESSFDEK---IVLPGRHFDVPIRIDIAHRCVRWQLA 155
Query: 140 -KRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKL 198
KR T TK+ EVSGT +K QKG GRAR G+LR PQ RGG T HGP PR KL
Sbjct: 156 RKRGVSTAKTKSRGEVSGTTRKARPQKGGGRARVGSLRAPQMRGGGTAHGPIPRDFEHKL 215
Query: 199 NKKVRRLGLKIALSARAAEGKVSLSVSLSLF 229
KKVRRLGL++ALSA+AAEG++ + L
Sbjct: 216 QKKVRRLGLRVALSAKAAEGRLVVVEDLKWM 246
>gi|357028808|ref|ZP_09090833.1| 50S ribosomal protein L4 [Mesorhizobium amorphae CCNWGS0123]
gi|355537508|gb|EHH06764.1| 50S ribosomal protein L4 [Mesorhizobium amorphae CCNWGS0123]
Length = 206
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 85/128 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L+ ++F + R+DI+ RVVRWQLAK+QQGTH K +E++ TG K
Sbjct: 3 LKITTLGGKDAGKVKLSEEIFGLDPREDILQRVVRWQLAKKQQGTHKAKGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
++QKGTGRARH + R PQFRGG HGP RSH L KKVR LGLK ALSA+A +
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALGLKHALSAKAKSASI 122
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 123 IVIDELKL 130
>gi|433775497|ref|YP_007305964.1| 50S ribosomal protein L4, bacterial/organelle [Mesorhizobium
australicum WSM2073]
gi|433667512|gb|AGB46588.1| 50S ribosomal protein L4, bacterial/organelle [Mesorhizobium
australicum WSM2073]
Length = 206
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 85/128 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L+ +F + R+DI+ RVVRWQLAK+QQGTH K +E++ TG K
Sbjct: 3 LKITTLGGKDAGKVELSDGIFGLDPREDILQRVVRWQLAKKQQGTHKAKGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
++QKGTGRARH + R PQFRGG HGP RSH +L KKVR LGLK ALSA+A +
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHELPKKVRALGLKHALSAKAKSASI 122
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 123 IIIDELKL 130
>gi|303246994|ref|ZP_07333270.1| ribosomal protein L4/L1e [Desulfovibrio fructosovorans JJ]
gi|302491701|gb|EFL51584.1| ribosomal protein L4/L1e [Desulfovibrio fructosovorans JJ]
Length = 210
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 91/128 (71%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G + LA +VF+V ++ +++H VVR QLA ++ GTHS KT S VSG GKK
Sbjct: 4 VKVYDQGRQEIGDVELAPEVFEVEVQPELLHLVVRAQLAAKRAGTHSVKTRSTVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ R P +RGG +HGP+PR + K+N+KVR L L++ALSA+ + +
Sbjct: 64 PWRQKGTGRARAGSTRSPIWRGGAIVHGPQPRDYGFKVNRKVRLLALRMALSAKLGDDSL 123
Query: 221 SLSVSLSL 228
L +LS+
Sbjct: 124 VLVDALSV 131
>gi|340776597|ref|ZP_08696540.1| 50S ribosomal protein L4 [Acetobacter aceti NBRC 14818]
Length = 204
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 79/122 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + + N G L ++F V R DI+ RVV WQLAKR+ GTH K + EVSGT
Sbjct: 1 MELDIKTLDNGSAGTATLPDEIFAVAPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTT 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTG AR G+LR PQ+R G +HGP R H L KKVRRLGL ALS +A +G
Sbjct: 61 KKPYRQKGTGSARQGSLRAPQYRTGGAVHGPVVRDHGYDLPKKVRRLGLISALSQKAKDG 120
Query: 219 KV 220
K+
Sbjct: 121 KL 122
>gi|325293335|ref|YP_004279199.1| 50S ribosomal protein L4 [Agrobacterium sp. H13-3]
gi|418408668|ref|ZP_12981984.1| 50S ribosomal protein L4 [Agrobacterium tumefaciens 5A]
gi|325061188|gb|ADY64879.1| 50S ribosomal protein L4 [Agrobacterium sp. H13-3]
gi|358005582|gb|EHJ97908.1| 50S ribosomal protein L4 [Agrobacterium tumefaciens 5A]
Length = 206
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 82/116 (70%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V +D G + L+ ++F + R+DI+ R+VRWQLAK+QQGTH TKT +EVS TG
Sbjct: 1 MELNVKTLEGKDAGKVSLSDEIFGLDPRQDILARMVRWQLAKKQQGTHKTKTRAEVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
K ++QKGTGRARH + R PQFRGG HGP RSHA L KKVR L L+ ALSA+
Sbjct: 61 AKMYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHAHDLPKKVRALALRHALSAK 116
>gi|357635318|ref|ZP_09133196.1| ribosomal protein L4/L1e [Desulfovibrio sp. FW1012B]
gi|357583872|gb|EHJ49205.1| ribosomal protein L4/L1e [Desulfovibrio sp. FW1012B]
Length = 210
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 89/121 (73%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
N++ G + L +VF+V ++ +++H VVR QLA ++ GTHS KT + VSG GKKPWRQKGT
Sbjct: 11 NQEIGTVELDPEVFEVEVQPELLHLVVRAQLAAKRAGTHSVKTRAFVSGGGKKPWRQKGT 70
Query: 168 GRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLS 227
GRAR G+ R P +RGG +HGP+PR + K+N+KVR+L L++ALSA+ + + L +L+
Sbjct: 71 GRARAGSTRSPLWRGGAVVHGPEPRDYTFKVNRKVRQLALRMALSAKLGDASLVLVDTLA 130
Query: 228 L 228
+
Sbjct: 131 V 131
>gi|150396208|ref|YP_001326675.1| 50S ribosomal protein L4 [Sinorhizobium medicae WSM419]
gi|166199909|sp|A6U860.1|RL4_SINMW RecName: Full=50S ribosomal protein L4
gi|150027723|gb|ABR59840.1| ribosomal protein L4/L1e [Sinorhizobium medicae WSM419]
Length = 206
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 79/114 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +D G + L+ +F + R+DII RVVRWQLAKRQQGTH K +EVS TG K
Sbjct: 3 LTVKTLEGKDAGKVSLSDAIFGLEPREDIIARVVRWQLAKRQQGTHKAKGRAEVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
++QKGTGRARH + R PQFRGG HGP RSHA L KKVR LGL+ ALSA+
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHAHDLPKKVRALGLRHALSAK 116
>gi|395782719|ref|ZP_10463091.1| 50S ribosomal protein L4 [Bartonella rattimassiliensis 15908]
gi|395416597|gb|EJF82967.1| 50S ribosomal protein L4 [Bartonella rattimassiliensis 15908]
Length = 206
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 84/117 (71%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +FD+ R+DI+ RVVRWQLA+RQQG+H ++ S+VS T
Sbjct: 2 DLVI--KTLYGNEAGKLKVSEAIFDLVPREDILQRVVRWQLARRQQGSHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KK+R LGL++ALSA+
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVVRSHAHDLPKKIRSLGLRLALSAK 116
>gi|330993847|ref|ZP_08317779.1| 50S ribosomal protein L4 [Gluconacetobacter sp. SXCC-1]
gi|329759115|gb|EGG75627.1| 50S ribosomal protein L4 [Gluconacetobacter sp. SXCC-1]
Length = 204
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 77/118 (65%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G L ++F R DI+ RVV WQLAKR+ GTH K + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGTASLPDEIFAATPRPDILARVVHWQLAKRRAGTHKVKGMGEISGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RQKGTG AR G+LR PQ+R G +HGP R H L KKVRRLGL ALS +AAEGK+
Sbjct: 65 RQKGTGSARQGSLRSPQYRTGGVVHGPVVRDHGYDLPKKVRRLGLIFALSQKAAEGKL 122
>gi|148260938|ref|YP_001235065.1| 50S ribosomal protein L4 [Acidiphilium cryptum JF-5]
gi|326404336|ref|YP_004284418.1| 50S ribosomal protein L4 [Acidiphilium multivorum AIU301]
gi|338989186|ref|ZP_08634057.1| RplD [Acidiphilium sp. PM]
gi|166234626|sp|A5FZW4.1|RL4_ACICJ RecName: Full=50S ribosomal protein L4
gi|146402619|gb|ABQ31146.1| LSU ribosomal protein L4P [Acidiphilium cryptum JF-5]
gi|325051198|dbj|BAJ81536.1| 50S ribosomal protein L4 [Acidiphilium multivorum AIU301]
gi|338205873|gb|EGO94138.1| RplD [Acidiphilium sp. PM]
Length = 216
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 78/122 (63%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I ++ G L + F R DI+ RVV WQLAKR+ GTH K + EVSGT
Sbjct: 1 MQIDISTLDAGSAGKAELPEEYFAATPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTT 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTG AR G+LR PQFR G +HGP R H LNKKVRRLGL ALS + AEG
Sbjct: 61 KKPYRQKGTGNARQGSLRAPQFRTGGAVHGPVVRDHGYSLNKKVRRLGLISALSQKLAEG 120
Query: 219 KV 220
K+
Sbjct: 121 KL 122
>gi|15965110|ref|NP_385463.1| 50S ribosomal protein L4 [Sinorhizobium meliloti 1021]
gi|334315896|ref|YP_004548515.1| 50S ribosomal protein L4 [Sinorhizobium meliloti AK83]
gi|384529068|ref|YP_005713156.1| 50S ribosomal protein L4 [Sinorhizobium meliloti BL225C]
gi|384536652|ref|YP_005720737.1| 50S ribosomal protein L4 [Sinorhizobium meliloti SM11]
gi|407720297|ref|YP_006839959.1| 50S ribosomal protein L4 [Sinorhizobium meliloti Rm41]
gi|418404902|ref|ZP_12978340.1| 50S ribosomal protein L4 [Sinorhizobium meliloti CCNWSX0020]
gi|433613128|ref|YP_007189926.1| 50S ribosomal protein L4, bacterial/organelle [Sinorhizobium
meliloti GR4]
gi|46577284|sp|Q92QG9.1|RL4_RHIME RecName: Full=50S ribosomal protein L4
gi|15074290|emb|CAC45936.1| Probable 50S ribosomal protein L4 [Sinorhizobium meliloti 1021]
gi|333811244|gb|AEG03913.1| ribosomal protein L4/L1e [Sinorhizobium meliloti BL225C]
gi|334094890|gb|AEG52901.1| ribosomal protein L4/L1e [Sinorhizobium meliloti AK83]
gi|336033544|gb|AEH79476.1| 50S ribosomal protein L4 [Sinorhizobium meliloti SM11]
gi|359501166|gb|EHK73790.1| 50S ribosomal protein L4 [Sinorhizobium meliloti CCNWSX0020]
gi|407318529|emb|CCM67133.1| 50S ribosomal protein L4 [Sinorhizobium meliloti Rm41]
gi|429551318|gb|AGA06327.1| 50S ribosomal protein L4, bacterial/organelle [Sinorhizobium
meliloti GR4]
Length = 206
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 80/114 (70%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +D G + L+ +F + R+DII RVVRWQLAKRQQGTH +K +EVS TG K
Sbjct: 3 LTVKTLEGKDAGKVSLSDAIFGLEPREDIIARVVRWQLAKRQQGTHKSKGRAEVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
++QKGTGRARH + R PQFRGG HGP RSHA L KK+R LGL+ ALSA+
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHAHDLPKKIRALGLRHALSAK 116
>gi|335036156|ref|ZP_08529483.1| 50S ribosomal protein L4 [Agrobacterium sp. ATCC 31749]
gi|333792047|gb|EGL63417.1| 50S ribosomal protein L4 [Agrobacterium sp. ATCC 31749]
Length = 206
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 81/116 (69%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V +D G + L+ ++F + R+DI+ R+VRWQLAK+QQGTH TK SEVS TG
Sbjct: 1 MELNVKTLEGKDAGKVSLSDEIFGLDPRQDILARMVRWQLAKKQQGTHKTKNRSEVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
K ++QKGTGRARH + R PQFRGG HGP RSHA L KKVR L L+ ALSA+
Sbjct: 61 AKMYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHAHDLPKKVRALALRHALSAK 116
>gi|15889241|ref|NP_354922.1| 50S ribosomal protein L4 [Agrobacterium fabrum str. C58]
gi|46576833|sp|Q8UE19.1|RL4_AGRT5 RecName: Full=50S ribosomal protein L4
gi|15157068|gb|AAK87707.1| 50S ribosomal protein L4 [Agrobacterium fabrum str. C58]
Length = 206
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 81/116 (69%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V +D G + L+ ++F + R+DI+ R+VRWQLAK+QQGTH TK SEVS TG
Sbjct: 1 MELNVKTLEGKDAGKVSLSDEIFGLDPRQDILARMVRWQLAKKQQGTHKTKNRSEVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
K ++QKGTGRARH + R PQFRGG HGP RSHA L KKVR L L+ ALSA+
Sbjct: 61 AKMYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHAHDLPKKVRALALRHALSAK 116
>gi|227821757|ref|YP_002825727.1| 50S ribosomal protein L4 [Sinorhizobium fredii NGR234]
gi|254803749|sp|C3MAY1.1|RL4_RHISN RecName: Full=50S ribosomal protein L4
gi|227340756|gb|ACP24974.1| 50S ribosomal protein L4 [Sinorhizobium fredii NGR234]
Length = 206
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 79/114 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +D G + L+ +F + R+DII RVVRWQLAKRQQGTH K +EV+ TG K
Sbjct: 3 LTVKTLEGKDAGKVSLSDAIFGLEPREDIIARVVRWQLAKRQQGTHKAKGRAEVARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
++QKGTGRARH + R PQFRGG HGP RSHA L KKVR LGL+ ALSA+
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHAHDLPKKVRALGLRHALSAK 116
>gi|349699373|ref|ZP_08901002.1| 50S ribosomal protein L4 [Gluconacetobacter europaeus LMG 18494]
Length = 204
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 77/118 (65%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G L ++F R DI+ RVV WQLAKR+ GTH K + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGKASLPDEIFAATPRTDIMARVVHWQLAKRRAGTHKVKGMGEISGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RQKGTG AR G+LR PQ+R G +HGP R H L KKVRRLGL ALS +AAEGK+
Sbjct: 65 RQKGTGSARQGSLRSPQYRTGGVVHGPVVRDHGYDLPKKVRRLGLISALSQKAAEGKL 122
>gi|114327219|ref|YP_744376.1| 50S ribosomal protein L4 [Granulibacter bethesdensis CGDNIH1]
gi|122327801|sp|Q0BUP9.1|RL4_GRABC RecName: Full=50S ribosomal protein L4
gi|114315393|gb|ABI61453.1| LSU ribosomal protein L1E (= L4P) [Granulibacter bethesdensis
CGDNIH1]
Length = 215
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 77/122 (63%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I + N G L ++F R DI+ RVV WQLA R+ GTH K + EVSGT
Sbjct: 1 MQIEIKTLDNGSAGTAELPDEIFAATPRADIMARVVHWQLACRRAGTHKVKGMGEVSGTT 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTG AR G+LR PQFR G +HGP R H L KKVRRLGL ALS + AEG
Sbjct: 61 KKPYRQKGTGNARQGSLRAPQFRTGGAVHGPVVRDHGYDLPKKVRRLGLISALSQKQAEG 120
Query: 219 KV 220
K+
Sbjct: 121 KL 122
>gi|42520529|ref|NP_966444.1| 50S ribosomal protein L4 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|46577161|sp|P61071.1|RL4_WOLPM RecName: Full=50S ribosomal protein L4
gi|42410268|gb|AAS14378.1| ribosomal protein L4 [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 204
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 86/131 (65%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N N++ G L +F + I+H +VRWQLAKR+ GTH TK IS+VSGT KP+
Sbjct: 5 LVNLSNDNVGAAQLNPLIFSAKQKLSILHDIVRWQLAKRRAGTHKTKGISDVSGTTAKPY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
QK TGRAR G+LR PQFRGG + GP RSH LNKKVR+ GLKIALS + +V +
Sbjct: 65 GQKRTGRARQGSLRSPQFRGGGIIFGPVVRSHTYSLNKKVRKFGLKIALSLKYLNNQVII 124
Query: 223 SVSLSLFLRPS 233
+L++ ++ +
Sbjct: 125 LDNLNIDVKKT 135
>gi|163868649|ref|YP_001609858.1| 50S ribosomal protein L4 [Bartonella tribocorum CIP 105476]
gi|189029491|sp|A9IW26.1|RL4_BART1 RecName: Full=50S ribosomal protein L4
gi|161018305|emb|CAK01863.1| 50S ribosomal protein L4 [Bartonella tribocorum CIP 105476]
Length = 206
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 84/117 (71%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +FD+ R+DI+ RVVRWQLA+RQQGTH ++ S+VS T
Sbjct: 2 DLVIKTLD--GHEAGKLKVSESIFDLVPREDILQRVVRWQLARRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KK+R LGL++ALSA+
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVFRSHAHDLPKKIRALGLRLALSAK 116
>gi|302344355|ref|YP_003808884.1| 50S ribosomal protein L4 [Desulfarculus baarsii DSM 2075]
gi|301640968|gb|ADK86290.1| ribosomal protein L4/L1e [Desulfarculus baarsii DSM 2075]
Length = 206
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 83/123 (67%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + ++E K G + LA +VF ++ ++H VV WQLAKR+ GT TKT SEV G
Sbjct: 1 MPKVDVYDEKKQKVGEIELADEVFAAEVKAHLLHEVVVWQLAKRRAGTACTKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G+ R P +RGG T HGPKPR + + KKVR+ LK ALS + AE
Sbjct: 61 GRKPWRQKGTGRARVGSRRSPLWRGGGTTHGPKPRDYDYNVPKKVRKAALKSALSDKLAE 120
Query: 218 GKV 220
K+
Sbjct: 121 EKL 123
>gi|158317790|ref|YP_001510298.1| 50S ribosomal protein L4 [Frankia sp. EAN1pec]
gi|158113195|gb|ABW15392.1| ribosomal protein L4/L1e [Frankia sp. EAN1pec]
Length = 247
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 86/136 (63%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
D +PV D G + L G VFDVP+ +IH+VV QLA +QGTHSTKT EV G
Sbjct: 20 DRTVPVHAPAGGDAGSVELPGAVFDVPVNVPLIHQVVVAQLAAARQGTHSTKTRGEVRGG 79
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KP+RQKGTGRAR G+LR PQF GG +HGP PR++ + KK++ L+ ALS RA
Sbjct: 80 GRKPYRQKGTGRARQGSLRAPQFTGGGIVHGPTPRNYDQRTPKKMKAAALRGALSDRARN 139
Query: 218 GKVSLSVSLSLFLRPS 233
++ + SL PS
Sbjct: 140 NRLHVVSSLVAGDTPS 155
>gi|13470552|ref|NP_102121.1| 50S ribosomal protein L4 [Mesorhizobium loti MAFF303099]
gi|46577286|sp|Q98N56.1|RL4_RHILO RecName: Full=50S ribosomal protein L4
gi|14021294|dbj|BAB47907.1| 50S ribosomal protein L4 [Mesorhizobium loti MAFF303099]
Length = 206
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 84/128 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L+ ++F + R+DI+ RVVRWQLAK+QQGTH K +E++ TG K
Sbjct: 3 LKITTLGGKDAGKVKLSEEIFGLDPREDILQRVVRWQLAKKQQGTHKAKGRAEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
++QKGTGRARH + R PQFRGG HGP RSH L K VR LGLK ALSA+A +
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKNVRALGLKHALSAKAKSASI 122
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 123 IVIDELKL 130
>gi|225630300|ref|YP_002727091.1| ribosomal protein L4 [Wolbachia sp. wRi]
gi|254803765|sp|C0R308.1|RL4_WOLWR RecName: Full=50S ribosomal protein L4
gi|225592281|gb|ACN95300.1| ribosomal protein L4 [Wolbachia sp. wRi]
Length = 204
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 86/131 (65%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N N++ G L +F + I+H +VRWQLAKR+ GTH TK IS+VSGT KP+
Sbjct: 5 LVNLSNDNVGTAQLNPLIFSAKQKLSILHDIVRWQLAKRRAGTHKTKGISDVSGTTAKPY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
QK TGRAR G+LR PQFRGG + GP RSH LNKKVR+ GLKIALS + +V +
Sbjct: 65 GQKRTGRARQGSLRSPQFRGGGIIFGPVVRSHTYSLNKKVRKFGLKIALSLKYLNNQVII 124
Query: 223 SVSLSLFLRPS 233
+L++ ++ +
Sbjct: 125 LDNLNIDVKKT 135
>gi|452853998|ref|YP_007495682.1| 50S ribosomal protein L4 [Desulfovibrio piezophilus]
gi|451897652|emb|CCH50531.1| 50S ribosomal protein L4 [Desulfovibrio piezophilus]
Length = 206
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 92/128 (71%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + N G + L+ +VF+V I+ +I++ VVR Q A ++QGTH+TK + +G G+K
Sbjct: 4 IQVVDQNNTKVGDIELSPEVFEVEIQPEILNMVVRAQRAAKRQGTHATKNRALKTGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ R P +RGG T GP+PR ++ K+NKKVR+L L++ALS+R +E K+
Sbjct: 64 PWRQKGTGRARAGSSRSPLWRGGATTFGPQPRDYSFKVNKKVRKLALQMALSSRVSEAKL 123
Query: 221 SLSVSLSL 228
++ ++ L
Sbjct: 124 TVVNTIDL 131
>gi|88608608|ref|YP_506158.1| 50S ribosomal protein L4 [Neorickettsia sennetsu str. Miyayama]
gi|109893610|sp|Q2GED8.1|RL4_NEOSM RecName: Full=50S ribosomal protein L4
gi|88600777|gb|ABD46245.1| ribosomal protein L4 [Neorickettsia sennetsu str. Miyayama]
Length = 214
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 78/117 (66%), Gaps = 6/117 (5%)
Query: 110 DKGFMVLAGDV------FDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWR 163
D G LAG V + P R D++ V+ WQLAKR+ GTH TK ISEVSGT +KP+R
Sbjct: 10 DFGASSLAGSVAVDRALIEAPFRPDLLSLVINWQLAKRRAGTHKTKGISEVSGTTRKPYR 69
Query: 164 QKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
QKGTGRAR G+LR PQFR G + GP R H +NKKVR L L+ ALS R AEG++
Sbjct: 70 QKGTGRARQGSLRAPQFRKGGIVFGPVVRQHGFSVNKKVRSLALRSALSMRFAEGRL 126
>gi|156405170|ref|XP_001640605.1| predicted protein [Nematostella vectensis]
gi|156227740|gb|EDO48542.1| predicted protein [Nematostella vectensis]
Length = 299
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Query: 107 FNEDK--GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQ 164
F +DK G + L VF R DI+HRVV WQ AKR+ GT K SEV G G+KPW Q
Sbjct: 91 FKDDKSLGMIELNDFVFGENPRIDILHRVVVWQRAKRRAGTACVKDRSEVRGGGRKPWPQ 150
Query: 165 KGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSV 224
KG +AR G++R P FRGG +HGPKPRS+ L KKVRR+GL++ALS R A+G + +
Sbjct: 151 KGLNKARQGSIRAPHFRGGGVVHGPKPRSYEYTLPKKVRRMGLRVALSVRLAQGDLHIVE 210
Query: 225 SLS 227
S
Sbjct: 211 SFD 213
>gi|258406184|ref|YP_003198926.1| 50S ribosomal protein L4 [Desulfohalobium retbaense DSM 5692]
gi|257798411|gb|ACV69348.1| ribosomal protein L4/L1e [Desulfohalobium retbaense DSM 5692]
Length = 206
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 86/118 (72%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ + + N+ G + L+ +VF+ +R +I+H+VVR QLA +++GT KT S + G G+
Sbjct: 3 VVQIVDKSNQAVGEVTLSSEVFEREVRAEILHQVVRSQLAAKRRGTVGVKTRSLIRGGGR 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
KPWRQKGTGRAR GT+R P + GG +HGP+ R + IK+NKKV+RL LK+A+S+R AE
Sbjct: 63 KPWRQKGTGRARAGTVRSPIWTGGAIVHGPQARDYDIKVNKKVKRLALKMAMSSRLAE 120
>gi|402486083|ref|ZP_10832915.1| 50S ribosomal protein L4 [Rhizobium sp. CCGE 510]
gi|401814739|gb|EJT07069.1| 50S ribosomal protein L4 [Rhizobium sp. CCGE 510]
Length = 206
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 78/112 (69%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DII RVVRWQLAK+QQGTH K +EVS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDIIARVVRWQLAKKQQGTHKAKGRAEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL++ALSA+
Sbjct: 65 KQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALGLRLALSAK 116
>gi|126724862|ref|ZP_01740705.1| 50S ribosomal protein L4 [Rhodobacterales bacterium HTCC2150]
gi|126706026|gb|EBA05116.1| 50S ribosomal protein L4 [Rhodobacteraceae bacterium HTCC2150]
Length = 206
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 79/120 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + G + LA D+F + R DI+HRVVR+QLAKRQ GTH KT SEV + KK
Sbjct: 3 LDVIKLDGKKAGSVDLAEDLFGLEARADILHRVVRYQLAKRQAGTHKVKTRSEVKYSTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
+RQKGTG ARHG P FRGG GP PRSHA LNKK R LGL+ ALSA+A G++
Sbjct: 63 IYRQKGTGGARHGARSAPIFRGGGVYKGPTPRSHAHDLNKKFRALGLRHALSAKAGAGQL 122
>gi|46579715|ref|YP_010523.1| 50S ribosomal protein L4 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602808|ref|YP_967208.1| 50S ribosomal protein L4 [Desulfovibrio vulgaris DP4]
gi|387153062|ref|YP_005701998.1| 50S ribosomal protein L4 [Desulfovibrio vulgaris RCH1]
gi|81566853|sp|Q72CH9.1|RL4_DESVH RecName: Full=50S ribosomal protein L4
gi|166234662|sp|A1VEB5.1|RL4_DESVV RecName: Full=50S ribosomal protein L4
gi|46449130|gb|AAS95782.1| ribosomal protein L4 [Desulfovibrio vulgaris str. Hildenborough]
gi|120563037|gb|ABM28781.1| LSU ribosomal protein L4P [Desulfovibrio vulgaris DP4]
gi|311233506|gb|ADP86360.1| ribosomal protein L4/L1e [Desulfovibrio vulgaris RCH1]
Length = 206
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 85/117 (72%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ V + ++ G + LA +VF+V +R +I+H VVR Q A + GTH+TKT + VSG G
Sbjct: 3 VVKVYDQNKQEAGEITLAPEVFEVEVRPEILHLVVRAQRAAFRAGTHATKTRAFVSGGGL 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
KPWRQKGTGRAR G++R P +RGG + GP+PR + K+NKKVR+L L++ALS+R A
Sbjct: 63 KPWRQKGTGRARAGSIRSPLWRGGAIIFGPQPRDYEFKVNKKVRKLALRMALSSRLA 119
>gi|408785477|ref|ZP_11197222.1| 50S ribosomal protein L4 [Rhizobium lupini HPC(L)]
gi|417859621|ref|ZP_12504677.1| 50S ribosomal protein L4 [Agrobacterium tumefaciens F2]
gi|418299388|ref|ZP_12911222.1| 50S ribosomal protein L4 [Agrobacterium tumefaciens CCNWGS0286]
gi|424910713|ref|ZP_18334090.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|338822685|gb|EGP56653.1| 50S ribosomal protein L4 [Agrobacterium tumefaciens F2]
gi|355535189|gb|EHH04479.1| 50S ribosomal protein L4 [Agrobacterium tumefaciens CCNWGS0286]
gi|392846744|gb|EJA99266.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|408488625|gb|EKJ96934.1| 50S ribosomal protein L4 [Rhizobium lupini HPC(L)]
Length = 206
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 81/116 (69%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V +D G + L+ ++F + R+DI+ R+VRWQLAK+QQGTH +K SEVS TG
Sbjct: 1 MELNVKTLEGKDAGKVSLSDEIFGLDPRQDILARMVRWQLAKKQQGTHKSKNRSEVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
K ++QKGTGRARH + R PQFRGG HGP RSHA L KKVR L L+ ALSA+
Sbjct: 61 AKMYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHAHDLPKKVRALALRHALSAK 116
>gi|402771843|ref|YP_006591380.1| 50S ribosomal protein L4 [Methylocystis sp. SC2]
gi|401773863|emb|CCJ06729.1| 50S ribosomal protein L4 [Methylocystis sp. SC2]
Length = 206
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 88/128 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I VT+F + G + L+ +VF + RKD+I R++RWQLAKR+ GTH+ K +E++ +GKK
Sbjct: 3 IDVTSFDGQAAGSIELSDEVFGLEPRKDLIFRMIRWQLAKRRAGTHAVKNRAEIARSGKK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
+QKGTG ARHG+ R PQFRGG GP RSHA L KKVR+L LK ALSA+A +G +
Sbjct: 63 LHKQKGTGGARHGSARAPQFRGGGRAFGPVVRSHAHDLTKKVRQLALKHALSAKAKDGGI 122
Query: 221 SLSVSLSL 228
+ S L
Sbjct: 123 IVWESAEL 130
>gi|378825668|ref|YP_005188400.1| 50S ribosomal protein L4 BL4 [Sinorhizobium fredii HH103]
gi|365178720|emb|CCE95575.1| 50S ribosomal protein L4 BL4 [Sinorhizobium fredii HH103]
Length = 206
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 79/114 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +D G + L+ +F + R+DII RV+RWQLAKRQQGTH K +EV+ TG K
Sbjct: 3 LTVKTLEGKDAGKVSLSDAIFGLEPREDIIARVIRWQLAKRQQGTHKAKGRAEVARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
++QKGTGRARH + R PQFRGG HGP RSHA L KK+R LGL+ ALSA+
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHAHDLPKKIRALGLRHALSAK 116
>gi|88657712|ref|YP_507228.1| 50S ribosomal protein L4 [Ehrlichia chaffeensis str. Arkansas]
gi|109893594|sp|Q2GH55.1|RL4_EHRCR RecName: Full=50S ribosomal protein L4
gi|88599169|gb|ABD44638.1| ribosomal protein L4 [Ehrlichia chaffeensis str. Arkansas]
Length = 205
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 80/120 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N ++ G + L +F V R DI+ VV WQL+KR+ GTH KTI ++SGT K
Sbjct: 3 VNIINVNSDRIGTIDLNPLIFSVNYRPDILKMVVDWQLSKRRAGTHKAKTIGDISGTTAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P RQK TGRAR G+LR PQFRGG + GP RSHA LNKKVR LGLK+ALS + + K+
Sbjct: 63 PHRQKHTGRARQGSLRSPQFRGGAVIFGPVVRSHAYSLNKKVRNLGLKVALSLKNSCNKL 122
>gi|395777952|ref|ZP_10458465.1| 50S ribosomal protein L4 [Bartonella elizabethae Re6043vi]
gi|423715878|ref|ZP_17690099.1| 50S ribosomal protein L4 [Bartonella elizabethae F9251]
gi|395418261|gb|EJF84588.1| 50S ribosomal protein L4 [Bartonella elizabethae Re6043vi]
gi|395429180|gb|EJF95254.1| 50S ribosomal protein L4 [Bartonella elizabethae F9251]
Length = 206
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 84/117 (71%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +FD+ R+DI+ RVVRWQL++RQQGTH ++ S+VS T
Sbjct: 2 DLVIKTLD--GREAGKLKVSESIFDLVPREDILQRVVRWQLSRRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KK+R LGL++ALSA+
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVVRSHAHDLPKKIRALGLRLALSAK 116
>gi|338739397|ref|YP_004676359.1| 50S ribosomal protein L4 [Hyphomicrobium sp. MC1]
gi|337759960|emb|CCB65791.1| 50S ribosomal protein L4 [Hyphomicrobium sp. MC1]
Length = 206
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 81/118 (68%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
VT+ G + LA D+F + +R D+IHR+VR+Q KR GTH + SEV+ TGKK +
Sbjct: 5 VTSLDAGKSGDIELADDIFGLEVRNDLIHRMVRYQTLKRMAGTHHAQDRSEVAVTGKKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
+QKGTG ARHG PQFRGG GPKPRSHAI+L KKVR L L+ ALS++A G++
Sbjct: 65 KQKGTGGARHGDKSAPQFRGGGKAFGPKPRSHAIELPKKVRALALRHALSSKAKAGEI 122
>gi|240850834|ref|YP_002972234.1| 50S ribosomal protein L4 [Bartonella grahamii as4aup]
gi|240267957|gb|ACS51545.1| 50S ribosomal protein L4 [Bartonella grahamii as4aup]
Length = 206
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 84/117 (71%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +FD+ R+DI+ RVVRWQLA+RQQG+H ++ S+VS T
Sbjct: 2 DLVIKTLD--GNEAGKLKVSEAIFDLVPREDILQRVVRWQLARRQQGSHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KK+R LGL++ALSA+
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVVRSHAHDLPKKIRALGLRLALSAK 116
>gi|254995178|ref|ZP_05277368.1| 50S ribosomal protein L4 [Anaplasma marginale str. Mississippi]
gi|255003352|ref|ZP_05278316.1| 50S ribosomal protein L4 [Anaplasma marginale str. Puerto Rico]
gi|255004476|ref|ZP_05279277.1| 50S ribosomal protein L4 [Anaplasma marginale str. Virginia]
Length = 178
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 79/117 (67%), Gaps = 7/117 (5%)
Query: 129 IIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHG 188
++ VV WQLAKR+ GTH T+ IS+VSGT KP+RQK TGRAR G+LR PQFRGG + G
Sbjct: 1 MLRDVVTWQLAKRRAGTHKTRCISDVSGTTAKPYRQKHTGRARQGSLRSPQFRGGAVVFG 60
Query: 189 PKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFSLSLKNTDTHV 245
P RSHA LNKKVRRLGLK+ALS + ++ K+ + L S L K D HV
Sbjct: 61 PVNRSHAYSLNKKVRRLGLKVALSMKVSDSKL-------VVLDDSGLLLEKTADAHV 110
>gi|325294397|ref|YP_004280911.1| 50S ribosomal protein L4 [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064845|gb|ADY72852.1| ribosomal protein L4/L1e [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 208
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 82/122 (67%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I V N N++ G + + ++ + PI+K + V+WQLAKR++GTHSTKT EV G G
Sbjct: 1 MEIKVVNAANQEVGTVTIKDEIANAPIKKHAVWETVKWQLAKRRRGTHSTKTRGEVRGGG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKPW QK TGRAR G++R PQ+ GG +HGPKPR + L KKVR++ L+ ++ R EG
Sbjct: 61 KKPWPQKHTGRARQGSIRAPQWVGGGVVHGPKPRDYYYPLPKKVRKVALRSVVAGRLQEG 120
Query: 219 KV 220
+
Sbjct: 121 NL 122
>gi|304391027|ref|ZP_07372979.1| ribosomal protein L4/L1 family protein [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304325910|gb|EFL93156.1| ribosomal protein L4/L1 family protein [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 214
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 82/122 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L G+VFD+ ++H+VV QLA +QGTH+TKT +VSG GKKPWRQKGTGRAR
Sbjct: 18 GTVELPGEVFDLDFNNPLVHQVVNAQLAAARQGTHATKTRGDVSGGGKKPWRQKGTGRAR 77
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G++R PQF GG T+HGP+PR ++ KK++ L+ ALS RA G++ + +
Sbjct: 78 QGSIRAPQFAGGGTVHGPQPRDYSQNTPKKMKAAALRQALSDRARAGRIHVLSDFGVKET 137
Query: 232 PS 233
PS
Sbjct: 138 PS 139
>gi|402497078|ref|YP_006556338.1| 50S ribosomal protein L4 [Wolbachia endosymbiont of Onchocerca
ochengi]
gi|398650351|emb|CCF78521.1| 50S ribosomal protein L4 [Wolbachia endosymbiont of Onchocerca
ochengi]
Length = 204
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 81/119 (68%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
D G + L +F V + I+H +V WQLAKR+ GTH T+ IS++SGT KP+ QK TGR
Sbjct: 12 DVGVVQLNPLIFFVKQKLSILHDIVTWQLAKRRAGTHKTRGISDISGTTAKPYSQKRTGR 71
Query: 170 ARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
AR G+LR PQFRGG + GP RSHA LNKKVR+LGLKIALS + ++ + SL +
Sbjct: 72 ARQGSLRSPQFRGGEIVFGPVVRSHAYSLNKKVRKLGLKIALSLKYFNNQIIVLDSLDI 130
>gi|398353244|ref|YP_006398708.1| 50S ribosomal protein L4 [Sinorhizobium fredii USDA 257]
gi|390128570|gb|AFL51951.1| 50S ribosomal protein L4 [Sinorhizobium fredii USDA 257]
Length = 206
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 78/114 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V +D G + L+ +F + R+DII RV+RWQLAKRQQGTH K +EVS TG K
Sbjct: 3 LTVKTLEGKDAGKVSLSDAIFGLEPREDIIARVIRWQLAKRQQGTHKAKGRAEVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
++QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL+ ALSA+
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALGLRHALSAK 116
>gi|298345471|ref|YP_003718158.1| 50S ribosomal protein L4 [Mobiluncus curtisii ATCC 43063]
gi|315656194|ref|ZP_07909085.1| 50S ribosomal protein L4 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298235532|gb|ADI66664.1| 50S ribosomal protein L4 [Mobiluncus curtisii ATCC 43063]
gi|315493196|gb|EFU82796.1| 50S ribosomal protein L4 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 214
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 82/122 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L G+VFD+ ++H+VV QLA +QGTH+TKT +VSG GKKPWRQKGTGRAR
Sbjct: 18 GTVELPGEVFDLDFNNPLVHQVVNAQLAAARQGTHATKTRGDVSGGGKKPWRQKGTGRAR 77
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G++R PQF GG T+HGP+PR ++ KK++ L+ ALS RA G++ + +
Sbjct: 78 QGSIRAPQFTGGGTVHGPQPRDYSQNTPKKMKAAALRQALSDRARAGRIHVLSDFGVKET 137
Query: 232 PS 233
PS
Sbjct: 138 PS 139
>gi|315655880|ref|ZP_07908778.1| 50S ribosomal protein L4 [Mobiluncus curtisii ATCC 51333]
gi|315489944|gb|EFU79571.1| 50S ribosomal protein L4 [Mobiluncus curtisii ATCC 51333]
Length = 214
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 84/126 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L G+VFD+ ++H+VV QLA +QGTH+TKT +VSG GKKPWRQKGTGRAR
Sbjct: 18 GTVELPGEVFDLDFNNPLVHQVVNAQLAAARQGTHATKTRGDVSGGGKKPWRQKGTGRAR 77
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G++R PQF GG T+HGP+PR ++ KK++ L+ ALS RA G++ + +
Sbjct: 78 QGSIRAPQFTGGGTVHGPQPRDYSQNTPKKMKAAALRQALSDRARAGRIHVLSDFGVKET 137
Query: 232 PSFSLS 237
PS ++
Sbjct: 138 PSTKVA 143
>gi|376298177|ref|YP_005169407.1| 50S ribosomal protein L4 [Desulfovibrio desulfuricans ND132]
gi|323460739|gb|EGB16604.1| ribosomal protein L4/L1e [Desulfovibrio desulfuricans ND132]
Length = 206
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 88/128 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + N G LA +VF+V I +I+++VVR Q A ++QGTH+TK + +G G+K
Sbjct: 4 IQVVDQNNTKVGDFELAPEVFEVEIMPEILNQVVRAQRASQRQGTHATKNRALKAGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ P +RGG GP+PR + K+NKKVR+L LK+ALS+R +E K+
Sbjct: 64 PWRQKGTGRARAGSSNSPLWRGGAAAFGPQPRDYTFKVNKKVRKLALKMALSSRVSEAKM 123
Query: 221 SLSVSLSL 228
++ S+ L
Sbjct: 124 TVVSSIDL 131
>gi|332798207|ref|YP_004459706.1| 50S ribosomal protein L4 [Tepidanaerobacter acetatoxydans Re1]
gi|438001126|ref|YP_007270869.1| LSU ribosomal protein L4p (L1e) [Tepidanaerobacter acetatoxydans
Re1]
gi|332695942|gb|AEE90399.1| ribosomal protein L4/L1e [Tepidanaerobacter acetatoxydans Re1]
gi|432177920|emb|CCP24893.1| LSU ribosomal protein L4p (L1e) [Tepidanaerobacter acetatoxydans
Re1]
Length = 208
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 88/131 (67%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN E G + L+ DVF V +R DI+HR V LA ++QGT +T T +EV+G
Sbjct: 1 MPKVTLFNIAGEQIGEIELSDDVFGVEVRPDIMHRAVVNYLANQRQGTANTLTRAEVAGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRARHG++R P +R G + GPKPRS + KK++RL LK ALSA+ E
Sbjct: 61 GRKPWRQKGTGRARHGSIRSPLWRKGGVIFGPKPRSFKSTMPKKLKRLALKSALSAKVVE 120
Query: 218 GKVSLSVSLSL 228
++ + SLS+
Sbjct: 121 NELIVIDSLSM 131
>gi|169830437|ref|YP_001716419.1| 50S ribosomal protein L4 [Candidatus Desulforudis audaxviator
MP104C]
gi|226730652|sp|B1I1I9.1|RL4_DESAP RecName: Full=50S ribosomal protein L4
gi|169637281|gb|ACA58787.1| ribosomal protein L4/L1e [Candidatus Desulforudis audaxviator
MP104C]
Length = 207
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN + G + L+ VF P+ ++H VV QLA R+QGTH TKT SEV G
Sbjct: 1 MPTAAVFNIEGQQVGEIELSEAVFGQPVNDAVLHEVVVMQLANRRQGTHDTKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRARHGT+R P +RGG + GP PR ++ ++ KKV+RL LK AL+ +
Sbjct: 61 GRKPWRQKGTGRARHGTIRSPIWRGGGIVFGPHPRDYSYRVPKKVKRLALKSALATKVDA 120
Query: 218 GKVSLSVSLSL 228
G++ + +L L
Sbjct: 121 GRILVLDALEL 131
>gi|159477929|ref|XP_001697061.1| mitochondrial ribosomal protein L4 [Chlamydomonas reinhardtii]
gi|158274973|gb|EDP00753.1| mitochondrial ribosomal protein L4 [Chlamydomonas reinhardtii]
Length = 124
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 76/108 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G L G F+VP+R DI+HRVVR+ AK QQGTH K+ +EVSG GKKPW QK TGRAR
Sbjct: 10 GLAPLPGAAFNVPVRIDILHRVVRYWRAKWQQGTHKAKSRAEVSGGGKKPWNQKKTGRAR 69
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R P ++GG H P+PRSHA L + R LG++ ALSA+ EG+
Sbjct: 70 QGSIRSPLWKGGGVSHAPRPRSHAHALPRSTRLLGMRCALSAKINEGR 117
>gi|354593427|ref|ZP_09011470.1| 50S ribosomal protein L4 [Commensalibacter intestini A911]
gi|353672538|gb|EHD14234.1| 50S ribosomal protein L4 [Commensalibacter intestini A911]
Length = 204
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 79/120 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N G + L ++F+V R DI+ RVV WQLAKR+ GTH K EVSGT KK
Sbjct: 3 VEIKTLDNGSVGNITLPAELFEVQPRADIMARVVHWQLAKRRAGTHKVKGRGEVSGTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTG AR G+LRGP FR G +HGP R H L K++RRLGL ALS + +EGK+
Sbjct: 63 PFRQKGTGNARQGSLRGPHFRTGGVVHGPVVRDHGYSLPKQIRRLGLISALSQKLSEGKL 122
>gi|39938687|ref|NP_950453.1| ribosomal protein L4 [Onion yellows phytoplasma OY-M]
gi|46577157|sp|P61067.1|RL4_ONYPE RecName: Full=50S ribosomal protein L4
gi|39721796|dbj|BAD04286.1| ribosomal protein L4 [Onion yellows phytoplasma OY-M]
Length = 207
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 88/131 (67%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDKGFM---VLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N N+ F+ VLA VFD+ + +++ VV Q A +QGTH+TKT + V+G
Sbjct: 1 MPKINILNQQGDFVSEKVLATTVFDIKPNQQVLYDVVNAQRAAMRQGTHATKTRALVAGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRARHG++R P +RGG GP PR +++K+N+KVR L LK ALS +A
Sbjct: 61 GKKPWRQKGTGRARHGSIRSPLWRGGGVTFGPSPRDYSVKVNQKVRSLALKSALSLQAKN 120
Query: 218 GKVSLSVSLSL 228
++ + +++L
Sbjct: 121 NQLVVVDNINL 131
>gi|222148367|ref|YP_002549324.1| 50S ribosomal protein L4 [Agrobacterium vitis S4]
gi|254803708|sp|B9JVN8.1|RL4_AGRVS RecName: Full=50S ribosomal protein L4
gi|221735355|gb|ACM36318.1| 50S ribosomal protein L4 [Agrobacterium vitis S4]
Length = 206
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 79/116 (68%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V D G + L+ +F + R+DII R+VRWQLAK+QQGTH TKT +EVS TG
Sbjct: 1 MELNVKTLEGTDAGTVSLSDAIFGLEPRQDIIARMVRWQLAKKQQGTHKTKTRAEVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
K ++QKGTGRARH + R PQFRGG HGP RSH L KKVR L L+ ALSA+
Sbjct: 61 AKMYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALALRHALSAK 116
>gi|397905104|ref|ZP_10505976.1| LSU ribosomal protein L4p (L1e) [Caloramator australicus RC3]
gi|397161899|emb|CCJ33310.1| LSU ribosomal protein L4p (L1e) [Caloramator australicus RC3]
Length = 206
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 88/131 (67%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + FN E G + L+ VF PI K+ +H+VV LA R+QGT S T +EVSG
Sbjct: 1 MPKVDLFNMNAEKVGEIELSDAVFGAPINKEAMHQVVVNILANRRQGTQSALTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRARHG++R PQ+R G + PKPR ++ L KK++R+ LK ALS++ AE
Sbjct: 61 GKKPWRQKGTGRARHGSIRSPQWRHGGIVFAPKPRDYSYTLPKKLKRVALKSALSSKVAE 120
Query: 218 GKVSLSVSLSL 228
++ + L+L
Sbjct: 121 NQIIVLDKLTL 131
>gi|403743621|ref|ZP_10953173.1| 50S ribosomal protein L4/L1e [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122651|gb|EJY56856.1| 50S ribosomal protein L4/L1e [Alicyclobacillus hesperidum
URH17-3-68]
Length = 206
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 84/128 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + + L+ +F P+R D++H+VV LA R+ GTH K + VSG G+K
Sbjct: 4 VAVLNTAGQQVSELQLSDKIFGAPVRLDLMHQVVLQYLAARRAGTHKVKNRAAVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ++GG + GP PRS+A + KKVRRL L ALS++ AEGK+
Sbjct: 64 PWRQKGTGRARQGSIRAPQWKGGGVVFGPTPRSYAFSVPKKVRRLALYSALSSKVAEGKI 123
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 124 IVLDDLQL 131
>gi|430003421|emb|CCF19208.1| 50S ribosomal subunit protein L4 [Rhizobium sp.]
Length = 206
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 78/112 (69%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ ++F + R+DI+ R+VRWQLAK+QQGTH K SEVS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDEIFGLDPREDILARMVRWQLAKKQQGTHKIKNRSEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+QKGTGRARH + R PQFRGG HGP RSHA L KKVR L L+ ALSA+
Sbjct: 65 KQKGTGRARHHSARAPQFRGGGKAHGPVVRSHAHDLPKKVRALALRHALSAK 116
>gi|190571547|ref|YP_001975905.1| 50S ribosomal protein L4 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018949|ref|ZP_03334756.1| ribosomal protein L4 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|226731443|sp|B3CN27.1|RL4_WOLPP RecName: Full=50S ribosomal protein L4
gi|190357819|emb|CAQ55275.1| ribosomal protein L4 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995058|gb|EEB55699.1| ribosomal protein L4 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 204
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 86/132 (65%)
Query: 102 PVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + N + G + L +F + I+H +VRWQLAKR+ G H TK IS+VSGT KP
Sbjct: 4 ELVDLSNNNVGSVELNPLIFSAKQKLSILHDIVRWQLAKRRVGAHKTKGISDVSGTTAKP 63
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVS 221
+ QK TGRAR G+LR PQFRGG + GP RSHA LNKKVR+ GLKIALS + +V
Sbjct: 64 YGQKRTGRARQGSLRSPQFRGGGIIFGPVVRSHAYSLNKKVRKFGLKIALSLKYLNNQVV 123
Query: 222 LSVSLSLFLRPS 233
+ SL++ ++ +
Sbjct: 124 VLDSLNVDVKKT 135
>gi|414162148|ref|ZP_11418395.1| 50S ribosomal protein L4 [Afipia felis ATCC 53690]
gi|410879928|gb|EKS27768.1| 50S ribosomal protein L4 [Afipia felis ATCC 53690]
Length = 206
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 82/120 (68%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT + G + L+ ++F + RKDII RVV WQLAKRQ GTH TK +EV TG
Sbjct: 1 MELNVTTLEGKAAGSVSLSDEIFGLEPRKDIIQRVVNWQLAKRQAGTHKTKGRAEVWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR LGL+ ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSARVPQFRGGGRAFGPVVRSHAHDLPKKVRALGLRHALSAKAKDG 120
>gi|194246734|ref|YP_002004373.1| 50S ribosomal protein L4 [Candidatus Phytoplasma mali]
gi|254803748|sp|B3QZZ2.1|RL4_PHYMT RecName: Full=50S ribosomal protein L4
gi|193807091|emb|CAP18529.1| 50S ribosomal protein L4 [Candidatus Phytoplasma mali]
Length = 207
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDKGFMV---LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N N+ F+ L ++F + I K +++ VV Q A +QGTH+TK + VSG
Sbjct: 1 MPKYNLINQKGDFLSQIDLDDEIFGISINKQVLYDVVNAQRASMRQGTHATKNRALVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRARHGT+R P +RGG GP PR +++K+N+KVRRL LK+ALS +
Sbjct: 61 GKKPWRQKGTGRARHGTIRSPLWRGGGVAFGPSPRDYSVKVNQKVRRLALKMALSWKINN 120
Query: 218 GKVSLSVSLSL 228
+ L +++L
Sbjct: 121 KNLILIDNINL 131
>gi|209548936|ref|YP_002280853.1| 50S ribosomal protein L4 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|424914485|ref|ZP_18337849.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|226730713|sp|B5ZYT6.1|RL4_RHILW RecName: Full=50S ribosomal protein L4
gi|209534692|gb|ACI54627.1| ribosomal protein L4/L1e [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|392850661|gb|EJB03182.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 206
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 78/112 (69%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL++ALSA+
Sbjct: 65 KQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALGLRLALSAK 116
>gi|218460209|ref|ZP_03500300.1| 50S ribosomal protein L4 [Rhizobium etli Kim 5]
Length = 206
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 80/116 (68%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V +D G + L+ ++F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG
Sbjct: 1 MELNVKTLEGKDAGKVSLSDEIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
K ++QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL+ ALSA+
Sbjct: 61 AKMYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALGLRHALSAK 116
>gi|94987403|ref|YP_595336.1| 50S ribosomal protein L4 [Lawsonia intracellularis PHE/MN1-00]
gi|442556248|ref|YP_007366073.1| 50S ribosomal protein L4 [Lawsonia intracellularis N343]
gi|166234679|sp|Q1MPR2.1|RL4_LAWIP RecName: Full=50S ribosomal protein L4
gi|94731652|emb|CAJ55015.1| ribosomal protein L4 [Lawsonia intracellularis PHE/MN1-00]
gi|441493695|gb|AGC50389.1| 50S ribosomal protein L4 [Lawsonia intracellularis N343]
Length = 206
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 83/118 (70%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
++ V N E+ G + L+ +F+V ++ +I+H VVR QLA ++ GTHS KT VSG G
Sbjct: 3 IVTVYNQQKEETGKINLSSKIFEVQVQPEILHLVVRAQLAAKRAGTHSVKTRGHVSGGGA 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
KPWRQKGTGRAR G+ R P +RGG + GP+PR ++ K+NKK+R L L +ALS+R AE
Sbjct: 63 KPWRQKGTGRARAGSNRSPLWRGGGIVFGPQPRDYSFKVNKKIRSLALCMALSSRFAE 120
>gi|86357306|ref|YP_469198.1| 50S ribosomal protein L4 [Rhizobium etli CFN 42]
gi|417103119|ref|ZP_11960977.1| 50S ribosomal protein L4 [Rhizobium etli CNPAF512]
gi|109893627|sp|Q2K9L5.1|RL4_RHIEC RecName: Full=50S ribosomal protein L4
gi|86281408|gb|ABC90471.1| 50S ribosomal protein L4 [Rhizobium etli CFN 42]
gi|327191387|gb|EGE58413.1| 50S ribosomal protein L4 [Rhizobium etli CNPAF512]
Length = 206
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 80/116 (68%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V +D G + L+ ++F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG
Sbjct: 1 MELNVKTLEGKDAGKVSLSDEIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
K ++QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL+ ALSA+
Sbjct: 61 AKMYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALGLRHALSAK 116
>gi|353328464|ref|ZP_08970791.1| 50S ribosomal protein L4 [Wolbachia endosymbiont wVitB of Nasonia
vitripennis]
gi|373449860|ref|ZP_09541953.1| 50S ribosomal subunit protein L4 [Wolbachia pipientis wAlbB]
gi|371932905|emb|CCE76940.1| 50S ribosomal subunit protein L4 [Wolbachia pipientis wAlbB]
Length = 204
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 86/132 (65%)
Query: 102 PVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ + N + G + L +F + I+H +VRWQLAKR+ G H TK IS+VSGT KP
Sbjct: 4 ELVDLSNNNVGSVELNPLIFSAKQKLSILHDIVRWQLAKRRVGAHKTKGISDVSGTTAKP 63
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVS 221
+ QK TGRAR G+LR PQFRGG + GP RSHA LNKKVR+ GLKIALS + +V
Sbjct: 64 YGQKRTGRARQGSLRSPQFRGGGIIFGPVVRSHAYSLNKKVRKFGLKIALSLKYLNNQVI 123
Query: 222 LSVSLSLFLRPS 233
+ SL++ ++ +
Sbjct: 124 VLDSLNVDVKKT 135
>gi|349685845|ref|ZP_08896987.1| 50S ribosomal protein L4 [Gluconacetobacter oboediens 174Bp2]
Length = 204
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 76/118 (64%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G L ++F R DI+ RVV WQLAKR+ G H K + E+SGT KKP+
Sbjct: 5 IKTLDNGSAGKTSLPDEIFAATPRTDIMARVVHWQLAKRRAGKHKVKGMGEISGTTKKPY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RQKGTG AR G+LR PQ+R G +HGP R H L KKVRRLGL ALS +AAEGK+
Sbjct: 65 RQKGTGSARQGSLRSPQYRTGGVVHGPVVRDHGYDLPKKVRRLGLISALSQKAAEGKL 122
>gi|218672011|ref|ZP_03521680.1| 50S ribosomal protein L4 [Rhizobium etli GR56]
Length = 206
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 80/116 (68%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V +D G + L+ ++F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG
Sbjct: 1 MELNVKTLEGKDAGKVSLSDEIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
K ++QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL+ ALSA+
Sbjct: 61 AKMYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALGLRHALSAK 116
>gi|418057098|ref|ZP_12695146.1| ribosomal protein L4/L1e [Hyphomicrobium denitrificans 1NES1]
gi|353204799|gb|EHB70211.1| ribosomal protein L4/L1e [Hyphomicrobium denitrificans 1NES1]
Length = 205
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 80/118 (67%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
VTN G + LA ++F + +R D+IHR+VR+Q KR GTH + SEV+ TGKK
Sbjct: 5 VTNLDASKAGDIDLADEIFGLEVRNDLIHRMVRYQTLKRMAGTHHAQDRSEVAVTGKKMT 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
+QKGTG ARHG PQFRGG GPKPRSHAI+L KKVR L L+ ALS++A G++
Sbjct: 65 KQKGTGGARHGDKSAPQFRGGGKAFGPKPRSHAIELPKKVRALALRHALSSKAKAGEI 122
>gi|319789239|ref|YP_004150872.1| ribosomal protein L4/L1e [Thermovibrio ammonificans HB-1]
gi|317113741|gb|ADU96231.1| ribosomal protein L4/L1e [Thermovibrio ammonificans HB-1]
Length = 208
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 82/120 (68%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I V + N++ G + + ++ + PI++ + V+WQLAKR++GTHSTKT EV G G
Sbjct: 1 MEIKVVDLNNKETGTVQIKDEIANAPIKQHAVWETVKWQLAKRRRGTHSTKTRGEVRGGG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KPW QK TGRAR G++R PQ+ GG +HGPKPR ++ L KKVR++ LK ++ R EG
Sbjct: 61 RKPWPQKHTGRARQGSIRAPQWVGGGVVHGPKPRDYSYNLPKKVRKVALKSVVAGRIQEG 120
>gi|300022542|ref|YP_003755153.1| 50S ribosomal protein L4/L1e [Hyphomicrobium denitrificans ATCC
51888]
gi|299524363|gb|ADJ22832.1| ribosomal protein L4/L1e [Hyphomicrobium denitrificans ATCC 51888]
Length = 205
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 80/118 (67%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
VTN G + LA ++F + +R D+IHR+VR+Q KR GTH + SEV+ TGKK
Sbjct: 5 VTNLDASKAGDIDLADEIFGLEVRNDLIHRMVRYQTLKRMAGTHHAQDRSEVAVTGKKMT 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
+QKGTG ARHG PQFRGG GPKPRSHAI+L KKVR L L+ ALS++A G++
Sbjct: 65 KQKGTGGARHGDKSAPQFRGGGKAFGPKPRSHAIELPKKVRALALRHALSSKAKAGEI 122
>gi|418937871|ref|ZP_13491458.1| ribosomal protein L4/L1e [Rhizobium sp. PDO1-076]
gi|375055420|gb|EHS51681.1| ribosomal protein L4/L1e [Rhizobium sp. PDO1-076]
Length = 206
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 79/112 (70%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V ++ G + L+ D+F + R+DII R++RWQLA ++QGTH TKT +EVS TG K +
Sbjct: 5 VKTLEGKEAGKVSLSDDIFGLDPREDIIARMIRWQLANKRQGTHKTKTRAEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+QKGTGRARH + R PQFRGG HGP RSHA L KKVR L L+ ALSA+
Sbjct: 65 KQKGTGRARHHSARAPQFRGGGKAHGPVVRSHAHDLPKKVRALALRHALSAK 116
>gi|395765125|ref|ZP_10445741.1| 50S ribosomal protein L4 [Bartonella sp. DB5-6]
gi|395412978|gb|EJF79457.1| 50S ribosomal protein L4 [Bartonella sp. DB5-6]
Length = 206
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ VF + RKDI+ RVVRWQLA+ QQGTH ++ S+VS T
Sbjct: 2 DLVIKTLD--GNETGKLKVSEAVFGLIPRKDILQRVVRWQLARHQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KKVR LGL++ALSA+
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVARSHAHDLPKKVRALGLRLALSAK 116
>gi|323136087|ref|ZP_08071170.1| ribosomal protein L4/L1e [Methylocystis sp. ATCC 49242]
gi|322399178|gb|EFY01697.1| ribosomal protein L4/L1e [Methylocystis sp. ATCC 49242]
Length = 206
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 86/122 (70%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I VT+F + G + L+ DVF + R D+I R++RWQLAKR+ GTH+ K ++++ TG
Sbjct: 1 MKIDVTSFDGQAAGSIELSDDVFGLEPRTDLIFRMIRWQLAKRRAGTHAVKNRADIARTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP+ RSH L KKVR+L LK ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSGRAPQFRGGGRAFGPQVRSHEHDLPKKVRQLALKHALSAKAKDG 120
Query: 219 KV 220
+
Sbjct: 121 GI 122
>gi|254796648|ref|YP_003081484.1| ribosomal protein L4/L1 family [Neorickettsia risticii str.
Illinois]
gi|254589885|gb|ACT69247.1| ribosomal protein L4/L1 family [Neorickettsia risticii str.
Illinois]
Length = 214
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 76/117 (64%), Gaps = 6/117 (5%)
Query: 110 DKGFMVLAGDV------FDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWR 163
D G LAG V + P R D++ V+ WQLAKR+ GTH TK ISEVSGT +KP+R
Sbjct: 10 DFGATSLAGSVAVDRALIEAPFRPDLLSLVINWQLAKRRAGTHKTKGISEVSGTTRKPYR 69
Query: 164 QKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
QKGTGRAR G+LR PQFR G + GP R H +NKKVR L ALS R AEG++
Sbjct: 70 QKGTGRARQGSLRAPQFRKGGIVFGPVVRQHGFSVNKKVRSFALCSALSMRFAEGRL 126
>gi|326436109|gb|EGD81679.1| hypothetical protein PTSG_02393 [Salpingoeca sp. ATCC 50818]
Length = 243
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 83/117 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G M L VF +RKDI+ RVV +Q A + GT TKT SEV G GKKPW+QKGTGRAR
Sbjct: 38 GMMELDPTVFGEDLRKDILQRVVVFQRASWRAGTAKTKTRSEVRGGGKKPWQQKGTGRAR 97
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
++R P FRGG T+HGP P+ +IKL KKV+R+G+++ALSA+ A+ + + SL+L
Sbjct: 98 ASSIRSPLFRGGGTVHGPTPKDWSIKLPKKVQRMGVRVALSAKLAQNDLLIVDSLNL 154
>gi|395779755|ref|ZP_10460224.1| 50S ribosomal protein L4 [Bartonella washoensis 085-0475]
gi|395420130|gb|EJF86415.1| 50S ribosomal protein L4 [Bartonella washoensis 085-0475]
Length = 206
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLV V + G + ++ VF + R+DI+ RVVRWQLA+RQQGTH ++ S+VS T
Sbjct: 2 DLV--VKTLEGNEAGKLKVSEGVFGLVPREDILQRVVRWQLARRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KK+R LGL++ALSA+
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVVRSHAHDLPKKIRALGLRLALSAK 116
>gi|420241691|ref|ZP_14745801.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. CF080]
gi|398069950|gb|EJL61275.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. CF080]
Length = 206
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 78/112 (69%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ ++F + R+DI+ R+VRWQLAK+QQGTH TK +EVS TG K +
Sbjct: 5 VKTLEGKDAGKVALSDEIFGLDPREDILARMVRWQLAKKQQGTHKTKGRAEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+QKGTGRARH + R PQFRGG HGP RSH L KKVR L L+ ALSA+
Sbjct: 65 KQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALALRHALSAK 116
>gi|423712871|ref|ZP_17687169.1| 50S ribosomal protein L4 [Bartonella washoensis Sb944nv]
gi|395410567|gb|EJF77121.1| 50S ribosomal protein L4 [Bartonella washoensis Sb944nv]
Length = 206
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLV V + G + ++ VF + R+DI+ RVVRWQLA+RQQGTH ++ S+VS T
Sbjct: 2 DLV--VKTLEGNEAGKLKVSEGVFGLVPREDILQRVVRWQLARRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KK+R LGL++ALSA+
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVVRSHAHDLPKKIRALGLRLALSAK 116
>gi|20808659|ref|NP_623830.1| 50S ribosomal protein L4 [Thermoanaerobacter tengcongensis MB4]
gi|46577279|sp|Q8R7V5.1|RL4_THETN RecName: Full=50S ribosomal protein L4
gi|20517293|gb|AAM25434.1| Ribosomal protein L4 [Thermoanaerobacter tengcongensis MB4]
Length = 206
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 81/120 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N E G + L VF VP+ ++H+ V LA ++QGTHSTKT EV G G+K
Sbjct: 4 VPVYNVKGEQVGEIELKDSVFGVPVNVAVMHQAVVNYLANQRQGTHSTKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+ G + GPKPR ++ KL KKV+RL LK ALS++ + ++
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIKGGVVFGPKPRDYSYKLPKKVKRLALKSALSSKVRDNEI 123
>gi|395793268|ref|ZP_10472673.1| 50S ribosomal protein L4 [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|423713038|ref|ZP_17687298.1| 50S ribosomal protein L4 [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395424664|gb|EJF90844.1| 50S ribosomal protein L4 [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395431582|gb|EJF97600.1| 50S ribosomal protein L4 [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 207
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 80/114 (70%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + G + ++ +F + R+DI+ RVVRWQLA+RQQGTH ++ S+VS TG K
Sbjct: 4 IVVKTLDGNEAGKLKVSEGIFGLVPREDILQRVVRWQLARRQQGTHQSQGRSDVSRTGAK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
++QKGTGRARH + R PQFRGG HGP RSHA L KKVR LG+++ALSA+
Sbjct: 64 MFKQKGTGRARHSSARAPQFRGGGKAHGPVFRSHACDLPKKVRALGVRLALSAK 117
>gi|421858368|ref|ZP_16290638.1| ribosomal protein L4 [Paenibacillus popilliae ATCC 14706]
gi|410832047|dbj|GAC41075.1| ribosomal protein L4 [Paenibacillus popilliae ATCC 14706]
Length = 207
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 78/114 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + LA VF + K ++H V QLA +QGTH KT SEVSG G+K
Sbjct: 4 VAVYNISGAQVGEIELADTVFGIEPNKHVLHDAVVMQLASMRQGTHKVKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
PW+QKGTGRAR G++R PQ++GG T+ GP PRS+A KL KKVRRL +K ALS++
Sbjct: 64 PWKQKGTGRARQGSIRSPQWKGGGTVFGPTPRSYAYKLPKKVRRLAIKSALSSK 117
>gi|54022701|ref|YP_116943.1| 50S ribosomal protein L4 [Nocardia farcinica IFM 10152]
gi|81603036|sp|Q5Z1W2.1|RL4_NOCFA RecName: Full=50S ribosomal protein L4
gi|54014209|dbj|BAD55579.1| putative ribosomal protein L4 [Nocardia farcinica IFM 10152]
Length = 230
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 86/136 (63%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+LV+PV + G + L ++FDV ++H+VV QLA +QGTH+TKT EVSG
Sbjct: 15 NLVLPVKEAGGKSNGTVELPAEIFDVTANIALMHQVVTAQLAAARQGTHATKTRGEVSGG 74
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKP+RQKGTGRAR G+ R PQF GG T+HGP+PR ++ + KK+ R L ALS RA
Sbjct: 75 GKKPYRQKGTGRARQGSTRAPQFTGGGTVHGPQPRDYSQRTPKKMIRAALHGALSDRARN 134
Query: 218 GKVSLSVSLSLFLRPS 233
++ + L PS
Sbjct: 135 DRIHVVSELVAGQTPS 150
>gi|374603260|ref|ZP_09676242.1| 50S ribosomal protein L4 [Paenibacillus dendritiformis C454]
gi|374391129|gb|EHQ62469.1| 50S ribosomal protein L4 [Paenibacillus dendritiformis C454]
Length = 207
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 78/114 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + LA VF + K ++H V QLA +QGTH KT SEVSG G+K
Sbjct: 4 VAVYNISGAQVGEIELADTVFGIEPNKHVLHDAVVMQLASMRQGTHKVKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
PW+QKGTGRAR G++R PQ++GG T+ GP PRS+A KL KKVRRL +K ALS++
Sbjct: 64 PWKQKGTGRARQGSIRSPQWKGGGTVFGPTPRSYAYKLPKKVRRLAIKSALSSK 117
>gi|384500965|gb|EIE91456.1| hypothetical protein RO3G_16167 [Rhizopus delemar RA 99-880]
Length = 247
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 81/120 (67%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
NE + L +VF VPIR+DI+HRVV WQ +QGT STKT +EVSGTGKK QKG
Sbjct: 48 NEPVSIINLEKEVFGVPIRRDILHRVVVWQRDSMRQGTSSTKTRAEVSGTGKKAAPQKGR 107
Query: 168 GRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLS 227
G+AR G ++ P FR G GPKPR H+ L +KV+ LGL++ALSA+ A+ ++ + SL
Sbjct: 108 GKARVGDMKAPHFRSGGIAFGPKPRDHSTDLPRKVQDLGLRVALSAKYAQDQLIVVESLQ 167
>gi|209884814|ref|YP_002288671.1| 50S ribosomal protein L4 [Oligotropha carboxidovorans OM5]
gi|337741542|ref|YP_004633270.1| 50S ribosomal protein L4 [Oligotropha carboxidovorans OM5]
gi|386030558|ref|YP_005951333.1| 50S ribosomal protein L4 [Oligotropha carboxidovorans OM4]
gi|226730700|sp|B6JET4.1|RL4_OLICO RecName: Full=50S ribosomal protein L4
gi|209873010|gb|ACI92806.1| ribosomal protein L4/L1 family [Oligotropha carboxidovorans OM5]
gi|336095626|gb|AEI03452.1| 50S ribosomal protein L4 [Oligotropha carboxidovorans OM4]
gi|336099206|gb|AEI07029.1| 50S ribosomal protein L4 [Oligotropha carboxidovorans OM5]
Length = 206
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 81/120 (67%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT + G + L+ +F + R DII RVV WQLAKRQ GTH TK +E++ TG
Sbjct: 1 MELNVTTLEGKAAGSVNLSDTIFGLEPRTDIIQRVVNWQLAKRQAGTHKTKGRAEIARTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR LGL+ ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSARVPQFRGGGRAFGPVVRSHAYDLPKKVRALGLRHALSAKAKDG 120
>gi|338975038|ref|ZP_08630393.1| LSU ribosomal protein L4p [Bradyrhizobiaceae bacterium SG-6C]
gi|414167350|ref|ZP_11423579.1| 50S ribosomal protein L4 [Afipia clevelandensis ATCC 49720]
gi|338231637|gb|EGP06772.1| LSU ribosomal protein L4p [Bradyrhizobiaceae bacterium SG-6C]
gi|410891167|gb|EKS38965.1| 50S ribosomal protein L4 [Afipia clevelandensis ATCC 49720]
Length = 206
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 81/120 (67%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT + G + L+ ++F + RKD+I RVV WQLAKRQ GTH K +EV TG
Sbjct: 1 MELKVTTLEGKAVGSVQLSDEIFGLEPRKDLIQRVVNWQLAKRQAGTHKAKGRAEVWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR LGLK ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSARVPQFRGGGRAFGPVVRSHAYDLPKKVRALGLKHALSAKAKDG 120
>gi|111220547|ref|YP_711341.1| 50S ribosomal protein L4 [Frankia alni ACN14a]
gi|111148079|emb|CAJ59747.1| 50S ribosomal protein L4 [Frankia alni ACN14a]
Length = 236
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 81/124 (65%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
D G L G VFDVP+ +IH+VV QLA +QGTH+TKT EV G G+KP+RQKGTGR
Sbjct: 27 DGGSAELPGGVFDVPLNVPLIHQVVVAQLAAARQGTHATKTRGEVRGGGRKPYRQKGTGR 86
Query: 170 ARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLF 229
AR G+LR PQF GG +HGP PRS+ + KK++ L+ ALS RA +V + SL
Sbjct: 87 ARQGSLRAPQFTGGGVVHGPTPRSYDQRTPKKMKAAALRGALSDRARNNRVHVVSSLVSG 146
Query: 230 LRPS 233
PS
Sbjct: 147 EAPS 150
>gi|395205593|ref|ZP_10396224.1| ribosomal protein L4/L1 family protein [Propionibacterium humerusii
P08]
gi|422441402|ref|ZP_16518212.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL037PA3]
gi|422472412|ref|ZP_16548900.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL037PA2]
gi|422572102|ref|ZP_16647673.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL044PA1]
gi|313836022|gb|EFS73736.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL037PA2]
gi|314929561|gb|EFS93392.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL044PA1]
gi|314970554|gb|EFT14652.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL037PA3]
gi|328906229|gb|EGG26004.1| ribosomal protein L4/L1 family protein [Propionibacterium humerusii
P08]
Length = 301
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 89/139 (64%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GDVFDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDVFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
SG GKKPWRQKGTGRAR G+ R PQ+ GG T+HGP+PRS+A + KK+ L+ ALS
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQWVGGGTVHGPQPRSYAQRTPKKMVAAALRGALSDM 120
Query: 215 AAEGKVSLSVSLSLFLRPS 233
A + ++ + SL +PS
Sbjct: 121 ARDNRIFIVTSLVDGDKPS 139
>gi|222085676|ref|YP_002544206.1| 50S ribosomal protein L4 [Agrobacterium radiobacter K84]
gi|398377350|ref|ZP_10535525.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. AP16]
gi|254803707|sp|B9JDS9.1|RL4_AGRRK RecName: Full=50S ribosomal protein L4
gi|221723124|gb|ACM26280.1| 50S ribosomal protein L4 [Agrobacterium radiobacter K84]
gi|397726688|gb|EJK87120.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. AP16]
Length = 206
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 80/116 (68%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V +D G + L+ +F + R+DII RV+RWQLAK++QGTH + +EVS TG
Sbjct: 1 MELNVKTLEGKDAGKVSLSDAIFGLEPREDIIARVIRWQLAKKRQGTHKAQGRAEVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
K ++QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL++ALSA+
Sbjct: 61 AKMYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALGLRLALSAK 116
>gi|407771094|ref|ZP_11118457.1| 50S ribosomal protein L4 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407285983|gb|EKF11476.1| 50S ribosomal protein L4 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 206
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + LA ++F + +R+DI+HR+V WQLAKR+ GTH K SE+S T KK RQKG+G AR
Sbjct: 14 GNIDLAEEIFGLDVRRDILHRMVNWQLAKRRAGTHKVKEKSEISATTKKFVRQKGSGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
HG+ + QFRGG HGP+ R H+ L KK R+L LK ALSA+A +GK+
Sbjct: 74 HGSRKAVQFRGGGVAHGPRVRDHSHDLTKKFRKLALKTALSAKAKDGKL 122
>gi|190891356|ref|YP_001977898.1| 50S ribosomal protein L4 [Rhizobium etli CIAT 652]
gi|226730712|sp|B3PWS2.1|RL4_RHIE6 RecName: Full=50S ribosomal protein L4
gi|190696635|gb|ACE90720.1| 50S ribosomal protein L4 [Rhizobium etli CIAT 652]
Length = 206
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 79/116 (68%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG
Sbjct: 1 MELNVKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
K ++QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL+ ALSA+
Sbjct: 61 AKMYKQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALGLRHALSAK 116
>gi|374300543|ref|YP_005052182.1| 50S ribosomal protein L4 [Desulfovibrio africanus str. Walvis Bay]
gi|332553479|gb|EGJ50523.1| ribosomal protein L4/L1e [Desulfovibrio africanus str. Walvis Bay]
Length = 206
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 84/117 (71%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ V + ++ G + LA +VF+VP+R +I++ VVR Q A + GTH TK + ++G GK
Sbjct: 3 VVKVVDQAKKEIGDIELAPEVFEVPVRPEILNLVVRAQRAAARSGTHMTKNRALITGGGK 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
KPWRQKGTGRAR G+ R P +R G T GP+PRS+A K+NKKVR L LK+ALS++ A
Sbjct: 63 KPWRQKGTGRARAGSSRSPLWRHGATTFGPQPRSYAFKVNKKVRALALKMALSSKLA 119
>gi|407642013|ref|YP_006805772.1| 50S ribosomal protein L4 [Nocardia brasiliensis ATCC 700358]
gi|407304897|gb|AFT98797.1| 50S ribosomal protein L4 [Nocardia brasiliensis ATCC 700358]
Length = 224
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 86/136 (63%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L +PV + G + L ++FDV ++H+VV QLA +QGTHSTKT EVSG
Sbjct: 9 NLTLPVKEPGGKTNGTVELPAEIFDVTANVALMHQVVTAQLAAARQGTHSTKTRGEVSGG 68
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKP+RQKGTGRAR G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS RA
Sbjct: 69 GKKPYRQKGTGRARQGSTRAPQFTGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARN 128
Query: 218 GKVSLSVSLSLFLRPS 233
++ + L PS
Sbjct: 129 ERIHVVTELVAGQTPS 144
>gi|379058899|ref|ZP_09849425.1| 50S ribosomal protein L4P [Serinicoccus profundi MCCC 1A05965]
Length = 216
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 94/158 (59%), Gaps = 16/158 (10%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I +T D G + L ++FDV +IH+VV QLA +QGTHSTKT EV G G+K
Sbjct: 4 ITITKPAGGDAGTVDLPAELFDVQTNVPLIHQVVVAQLAAARQGTHSTKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G+ R PQF GG T+HGP+PR++A K KK++ L+ ALS RA G++
Sbjct: 64 PYRQKGTGRARQGSTRAPQFAGGGTVHGPQPRNYAQKTPKKMKAAALRGALSDRARHGRI 123
Query: 221 SLSVSL----------------SLFLRPSFSLSLKNTD 242
+ +L +L RP+F + L T+
Sbjct: 124 HVLSALVEGELPSTRTARTALQALSDRPNFLVVLNRTE 161
>gi|319404424|emb|CBI78027.1| 50S ribosomal protein L4 [Bartonella rochalimae ATCC BAA-1498]
Length = 206
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 84/117 (71%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + ++ G + ++ ++F + R+DI+ RVVRWQLA+RQ+GTH ++ S+VS T
Sbjct: 2 DLVIKTLD--GKEAGKLKVSENIFGLTPREDILQRVVRWQLARRQKGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KKVR LGL++ALS +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVMRSHAHNLPKKVRALGLRLALSVK 116
>gi|357039748|ref|ZP_09101540.1| ribosomal protein L4/L1e [Desulfotomaculum gibsoniae DSM 7213]
gi|355357554|gb|EHG05327.1| ribosomal protein L4/L1e [Desulfotomaculum gibsoniae DSM 7213]
Length = 207
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 86/128 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N + G + L D+F + + + +H VV QLA R+QGTH TKT +EVSG G+K
Sbjct: 4 VAMYNINGDQVGEIDLKEDIFGIAVHQQALHDVVTMQLAGRRQGTHDTKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRARHG++R P +RGG + GP PRS++ ++ KKVRRL +K ALS++ G +
Sbjct: 64 PYRQKGTGRARHGSIRSPIWRGGGIVFGPHPRSYSYRVPKKVRRLAMKSALSSKVEGGTI 123
Query: 221 SLSVSLSL 228
+ L +
Sbjct: 124 VVLEELKM 131
>gi|384918430|ref|ZP_10018507.1| 50S ribosomal protein L4 [Citreicella sp. 357]
gi|384467684|gb|EIE52152.1| 50S ribosomal protein L4 [Citreicella sp. 357]
Length = 205
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 77/118 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L +FD+ R DI+HRVVRWQ K Q GTH KT SEVS + KK
Sbjct: 3 LDVINLDGSAAGEVELTDGIFDLEPRADILHRVVRWQRNKAQAGTHKVKTRSEVSYSTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+RQKGTG ARHG+ + P FR G GP PRSHA +L KKVR LGLK+ALSA+A G
Sbjct: 63 IYRQKGTGGARHGSRKAPIFRKGGIYKGPTPRSHAHELPKKVRALGLKMALSAKAKAG 120
>gi|297625783|ref|YP_003687546.1| 50S ribosomal protein L4 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921548|emb|CBL56102.1| 50S ribosomal protein L4 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 233
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 84/126 (66%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V N + G + L G++FD ++H+VV QLA +QGTHSTKT +EV
Sbjct: 1 MNETTSIDVVNAEGKKAGSVELPGELFDAQANVPLMHQVVTAQLAAARQGTHSTKTRAEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
SG GKKPWRQKGTGRAR G++R PQ+ GG HGP+PR ++ + KK+ L+ ALS R
Sbjct: 61 SGGGKKPWRQKGTGRARQGSIRSPQWAGGGISHGPQPREYSQRTPKKMVATALRGALSDR 120
Query: 215 AAEGKV 220
A EG++
Sbjct: 121 AREGRI 126
>gi|414174076|ref|ZP_11428703.1| 50S ribosomal protein L4 [Afipia broomeae ATCC 49717]
gi|410890710|gb|EKS38509.1| 50S ribosomal protein L4 [Afipia broomeae ATCC 49717]
Length = 206
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 81/120 (67%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT + G + L+ ++F + RKD+I RVV WQLAKRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKAAGSVQLSDEIFGLEPRKDLIQRVVNWQLAKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR LGLK ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSARVPQFRGGGRAFGPVVRSHAHDLPKKVRALGLKHALSAKAQDG 120
>gi|297717844|gb|ADI50065.1| LSU ribosomal protein L4p [Candidatus Odyssella thessalonicensis
L13]
Length = 206
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 92/151 (60%), Gaps = 8/151 (5%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + G + L ++F + R DI+ RV+ WQLAKR+ G H TK + +V G+ +K
Sbjct: 3 IDVINIEAKKAGDIELNPEIFGLQPRVDILSRVIEWQLAKRRSGNHKTKEVGDVRGSTRK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
+RQKGTG ARHG+ R QFRGG + GP RSHA L KKVR+LGLKIALSA+ G+
Sbjct: 63 IYRQKGTGNARHGSKRQVQFRGGCVVFGPVVRSHAYSLPKKVRKLGLKIALSAKTQAGE- 121
Query: 221 SLSVSLSLFLRPSFSLSLKNTDTHVHIVSSI 251
L + SF ++ T + I++++
Sbjct: 122 -------LIVVDSFKVATGKTKDLLKIITAL 145
>gi|344923959|ref|ZP_08777420.1| 50S ribosomal protein L4 [Candidatus Odyssella thessalonicensis
L13]
Length = 207
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 92/151 (60%), Gaps = 8/151 (5%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + G + L ++F + R DI+ RV+ WQLAKR+ G H TK + +V G+ +K
Sbjct: 3 IDVINIEAKKAGDIELNPEIFGLQPRVDILSRVIEWQLAKRRSGNHKTKEVGDVRGSTRK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
+RQKGTG ARHG+ R QFRGG + GP RSHA L KKVR+LGLKIALSA+ G+
Sbjct: 63 IYRQKGTGNARHGSKRQVQFRGGCVVFGPVVRSHAYSLPKKVRKLGLKIALSAKTQAGE- 121
Query: 221 SLSVSLSLFLRPSFSLSLKNTDTHVHIVSSI 251
L + SF ++ T + I++++
Sbjct: 122 -------LIVVDSFKVATGKTKDLLKIITAL 145
>gi|291521897|emb|CBK80190.1| LSU ribosomal protein L4P [Coprococcus catus GD/7]
Length = 206
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 8/151 (5%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L VF V + ++++H+ V QLA +QGT S KT SEVSG G+K
Sbjct: 4 LSVYNIEGNQVGEIELNDAVFGVEVNENLMHKAVVAQLAASRQGTQSAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ+ GG + PKPR ++IKLNKK RRL +K AL+ + E K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPKPRDYSIKLNKKERRLAIKSALTTKVNESK- 122
Query: 221 SLSVSLSLFLRPSFSLSLKNTDTHVHIVSSI 251
L + SF L T V +++++
Sbjct: 123 -------LIVLDSFELDEIKTKKFVAVMNNL 146
>gi|299135256|ref|ZP_07028447.1| ribosomal protein L4/L1e [Afipia sp. 1NLS2]
gi|298590233|gb|EFI50437.1| ribosomal protein L4/L1e [Afipia sp. 1NLS2]
Length = 206
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 81/120 (67%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT + G + L+ ++F + RKDII RVV WQLAKRQ GTH K +EV TG
Sbjct: 1 MELNVTTLEGKAAGSVNLSDEIFGLEPRKDIIQRVVNWQLAKRQAGTHKAKGRAEVWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR LGL+ ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSARVPQFRGGGRAFGPVVRSHAHDLPKKVRALGLRHALSAKAKDG 120
>gi|116251541|ref|YP_767379.1| 50S ribosomal protein L4 [Rhizobium leguminosarum bv. viciae 3841]
gi|424874859|ref|ZP_18298521.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|424881131|ref|ZP_18304763.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WU95]
gi|166199852|sp|Q1MIE0.1|RL4_RHIL3 RecName: Full=50S ribosomal protein L4
gi|115256189|emb|CAK07270.1| putative 50S ribosomal protein L4 [Rhizobium leguminosarum bv.
viciae 3841]
gi|392517494|gb|EIW42226.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WU95]
gi|393170560|gb|EJC70607.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 206
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 77/112 (68%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL+ ALSA+
Sbjct: 65 KQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALGLRHALSAK 116
>gi|395790887|ref|ZP_10470346.1| 50S ribosomal protein L4 [Bartonella alsatica IBS 382]
gi|395409183|gb|EJF75782.1| 50S ribosomal protein L4 [Bartonella alsatica IBS 382]
Length = 206
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 87/131 (66%), Gaps = 2/131 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + ++ G + ++ +F + R+DI+ RVVRWQLA RQQGTH ++ S+VS T
Sbjct: 2 DLVIKTLD--GDEAGKLKVSDAIFGLVPREDILQRVVRWQLAHRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G K ++QKGTGRARH + R PQFRGG HGP RSH L KK+R LGL+ ALSA+ E
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVVRSHTHDLPKKIRALGLRFALSAKLKE 119
Query: 218 GKVSLSVSLSL 228
+ + +S+
Sbjct: 120 KNLIVVDEMSI 130
>gi|424894638|ref|ZP_18318212.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393178865|gb|EJC78904.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 206
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 77/112 (68%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL+ ALSA+
Sbjct: 65 KQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALGLRHALSAK 116
>gi|424890778|ref|ZP_18314377.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393172996|gb|EJC73041.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 206
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 77/112 (68%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K +EVS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL+ ALSA+
Sbjct: 65 KQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALGLRHALSAK 116
>gi|257125037|ref|YP_003163151.1| 50S ribosomal protein L4 [Leptotrichia buccalis C-1013-b]
gi|257048976|gb|ACV38160.1| ribosomal protein L4/L1e [Leptotrichia buccalis C-1013-b]
Length = 214
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 94/154 (61%), Gaps = 11/154 (7%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+PV N + D G + + DVF + K ++H V+ +LA+ +QG+ STKT +EV G
Sbjct: 1 MPVLNIYKLDGSQAGTIEVNNDVFGIEPNKHVMHEVLVAELAEARQGSASTKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KP+RQKGTGRAR G+ R P GG +HGPKPR++A K+NKKVR+L LK AL+ + +E
Sbjct: 61 GRKPFRQKGTGRARQGSTRAPHMVGGGVVHGPKPRNYAKKVNKKVRKLALKSALATKISE 120
Query: 218 GKVSLSVSLSLFLRPSFSLSLKNTDTHVHIVSSI 251
G V + F+L + T T + ++
Sbjct: 121 GNV--------IVLDDFALEIPKTKTFIDFAKAL 146
>gi|409436835|ref|ZP_11263994.1| 50S ribosomal subunit protein L4 [Rhizobium mesoamericanum STM3625]
gi|408751309|emb|CCM75148.1| 50S ribosomal subunit protein L4 [Rhizobium mesoamericanum STM3625]
Length = 206
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 77/112 (68%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K ++VS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHQAKGRADVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL+ ALSA+
Sbjct: 65 KQKGTGRARHHSARAPQFRGGGKAHGPVARSHEHDLPKKVRALGLRHALSAK 116
>gi|383818613|ref|ZP_09973899.1| 50S ribosomal protein L4 [Mycobacterium phlei RIVM601174]
gi|383338469|gb|EID16833.1| 50S ribosomal protein L4 [Mycobacterium phlei RIVM601174]
Length = 217
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 84/135 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + G + L ++FDV ++H+VV QLA +QGTHSTKT EVSG G
Sbjct: 3 LKIDVHTPAGKKDGSVELPAELFDVEANIALMHQVVTAQLAAARQGTHSTKTRGEVSGGG 62
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTGRAR G+ R PQF GG T+HGPKPR ++ + KK+ R L+ ALS RA G
Sbjct: 63 KKPYRQKGTGRARQGSTRAPQFTGGGTVHGPKPRDYSERTPKKMIRAALRGALSDRARNG 122
Query: 219 KVSLSVSLSLFLRPS 233
++ L PS
Sbjct: 123 RIHAVTELVEGQTPS 137
>gi|120402317|ref|YP_952146.1| 50S ribosomal protein L4 [Mycobacterium vanbaalenii PYR-1]
gi|119955135|gb|ABM12140.1| LSU ribosomal protein L4P [Mycobacterium vanbaalenii PYR-1]
Length = 219
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 82/124 (66%)
Query: 97 QDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSG 156
+D IPV + G + L ++FDV ++H+VV QLA ++QGTHSTKT EVSG
Sbjct: 4 EDRKIPVRTPAGKTDGSIELPAELFDVEPNIALMHQVVNAQLAAKRQGTHSTKTRGEVSG 63
Query: 157 TGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
GKKP+RQKGTGRAR G+ R PQF GG +HGPKPR ++ + KK+ R L+ ALS RA
Sbjct: 64 GGKKPYRQKGTGRARQGSTRAPQFTGGGIVHGPKPRDYSERTPKKMIRAALRGALSDRAR 123
Query: 217 EGKV 220
++
Sbjct: 124 NDRI 127
>gi|115525584|ref|YP_782495.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris BisA53]
gi|122295409|sp|Q07KL9.1|RL4_RHOP5 RecName: Full=50S ribosomal protein L4
gi|115519531|gb|ABJ07515.1| LSU ribosomal protein L4P [Rhodopseudomonas palustris BisA53]
Length = 206
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 80/120 (66%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT +D G + L+ ++F + R DII R V WQLAKRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKDAGSVQLSDEIFGLDPRSDIIQRCVIWQLAKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHAI L KKVR + LK ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSQRVPQFRGGGRAFGPVVRSHAIDLPKKVRAMALKHALSAKAKDG 120
>gi|451940811|ref|YP_007461449.1| 50S ribosomal protein L4 [Bartonella australis Aust/NH1]
gi|451900198|gb|AGF74661.1| 50S ribosomal protein L4 [Bartonella australis Aust/NH1]
Length = 207
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLV+ + + G + L+ +F + R+DI+ RVVRWQLA+RQQGTH ++ S+VS T
Sbjct: 3 DLVVKTLD--GNEVGELKLSESIFGLVPREDILQRVVRWQLARRQQGTHQSQGRSDVSRT 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP R+HA L KK+R LGL++ALS +
Sbjct: 61 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVVRNHAHDLPKKIRALGLRLALSVK 117
>gi|325179760|emb|CCA14163.1| 50S ribosomal protein L4 putative [Albugo laibachii Nc14]
Length = 279
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 86/130 (66%), Gaps = 4/130 (3%)
Query: 102 PVTN--FFNEDKGFMVLAGD--VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
P+ N F ++ LA D VF+VP+RKDI+HRVVRWQLA R+ G H K+ SE G+
Sbjct: 71 PIINTLAFKDESVVNTLALDPSVFNVPLRKDILHRVVRWQLACRRSGNHKAKSRSETRGS 130
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
+K QKG+G+AR G +R PQ+RGG +HGP R H+ L KKVR G+++ALS + E
Sbjct: 131 TRKVRPQKGSGQARVGDVRAPQWRGGYCVHGPVVRDHSYTLQKKVRAFGIRVALSQKLRE 190
Query: 218 GKVSLSVSLS 227
GK+++ +L
Sbjct: 191 GKLAIVENLD 200
>gi|399035013|ref|ZP_10732567.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. CF122]
gi|398067225|gb|EJL58764.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. CF122]
Length = 206
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 77/112 (68%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K ++VS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHQAKGRADVSRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL+ ALSA+
Sbjct: 65 KQKGTGRARHHSARAPQFRGGGKAHGPVARSHEHDLPKKVRALGLRHALSAK 116
>gi|241204166|ref|YP_002975262.1| 50S ribosomal protein L4 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858056|gb|ACS55723.1| ribosomal protein L4/L1e [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 206
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 77/112 (68%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K +E+S TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVIRWQLAKKQQGTHKAKGRAEISRTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL+ ALSA+
Sbjct: 65 KQKGTGRARHHSARAPQFRGGGKAHGPVVRSHEHDLPKKVRALGLRHALSAK 116
>gi|49475793|ref|YP_033834.1| 50S ribosomal protein L4 [Bartonella henselae str. Houston-1]
gi|81647792|sp|Q6G2W6.1|RL4_BARHE RecName: Full=50S ribosomal protein L4
gi|49238600|emb|CAF27841.1| 50S ribosomal protein l4 [Bartonella henselae str. Houston-1]
Length = 206
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DL+I + + G + ++ VF + R+DI+ RVVRWQLA+RQQGTH ++ S+VS T
Sbjct: 2 DLLIKTLD--GNEVGKLKVSESVFGLVPREDILQRVVRWQLARRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KK+R LGL+ ALSA+
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVVRSHAHTLPKKIRALGLRFALSAK 116
>gi|288574663|ref|ZP_06393020.1| ribosomal protein L4/L1e [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570404|gb|EFC91961.1| ribosomal protein L4/L1e [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 206
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 80/120 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + E G + L+G+VFDVP+ +H+VV QLA R+QGTH TK +V G GKK
Sbjct: 4 IKLVTITGESTGELSLSGNVFDVPLHVPAMHQVVVAQLANRRQGTHCTKGRGDVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQK TGRARHG+ R P + GG HGPKPR++ K+NKKVRRL + ALS + + ++
Sbjct: 64 PWRQKHTGRARHGSSRSPIWVGGGVTHGPKPRNYRQKVNKKVRRLAICSALSQKIRDAQL 123
>gi|239832121|ref|ZP_04680450.1| 50S ribosomal protein L4 [Ochrobactrum intermedium LMG 3301]
gi|444310461|ref|ZP_21146083.1| 50S ribosomal protein L4 [Ochrobactrum intermedium M86]
gi|239824388|gb|EEQ95956.1| 50S ribosomal protein L4 [Ochrobactrum intermedium LMG 3301]
gi|443486269|gb|ELT49049.1| 50S ribosomal protein L4 [Ochrobactrum intermedium M86]
Length = 206
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 78/115 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
++QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL+ ALSA+A
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGQAHGPVVRSHDHDLPKKVRALGLRHALSAKA 117
>gi|335427953|ref|ZP_08554873.1| 50S ribosomal protein L4 [Haloplasma contractile SSD-17B]
gi|334893879|gb|EGM32088.1| 50S ribosomal protein L4 [Haloplasma contractile SSD-17B]
Length = 207
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 85/131 (64%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN+ G + LA +VF + + +++ V Q A +QGTH TKT +EV G
Sbjct: 1 MPKVALFNQSGTQVGDIQLAEEVFGIEPNQQVLYDAVIMQRASLRQGTHKTKTRTEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ +LNKKVRRL L+ ALS + E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYRLNKKVRRLALRSALSTKVNE 120
Query: 218 GKVSLSVSLSL 228
V + SL+
Sbjct: 121 DSVVVLDSLTF 131
>gi|357419487|ref|YP_004932479.1| 50S ribosomal protein L4 [Thermovirga lienii DSM 17291]
gi|355396953|gb|AER66382.1| LSU ribosomal protein L4P [Thermovirga lienii DSM 17291]
Length = 208
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 87/151 (57%), Gaps = 8/151 (5%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G L+ VF P+ +H+VV QLA R+QGTHSTK+ EV G G+K
Sbjct: 4 VKVVNLKGEIVGEQQLSDAVFSAPVHVPAMHQVVVAQLANRRQGTHSTKSRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQK TGRARHG+ R P + GG HGP PR + K+NKKVRRL LK ALS + E K
Sbjct: 64 PWRQKHTGRARHGSRRSPIWVGGGVAHGPVPRDYHQKVNKKVRRLALKSALSLKVMEDK- 122
Query: 221 SLSVSLSLFLRPSFSLSLKNTDTHVHIVSSI 251
L + SF + +T V + SI
Sbjct: 123 -------LVVLDSFDMEKPSTKAVVSFLESI 146
>gi|153009287|ref|YP_001370502.1| 50S ribosomal protein L4 [Ochrobactrum anthropi ATCC 49188]
gi|404318989|ref|ZP_10966922.1| 50S ribosomal protein L4 [Ochrobactrum anthropi CTS-325]
gi|166234695|sp|A6X0B9.1|RL4_OCHA4 RecName: Full=50S ribosomal protein L4
gi|151561175|gb|ABS14673.1| ribosomal protein L4/L1e [Ochrobactrum anthropi ATCC 49188]
Length = 206
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 78/115 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
++QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL+ ALSA+A
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGQAHGPVVRSHDHDLPKKVRALGLRHALSAKA 117
>gi|271962633|ref|YP_003336829.1| 50S ribosomal protein L4 [Streptosporangium roseum DSM 43021]
gi|270505808|gb|ACZ84086.1| 50S ribosomal protein L4 [Streptosporangium roseum DSM 43021]
Length = 215
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 86/140 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + G + L GD+FD + +IH+VV QLA R+QGTH KT EVSG GKK
Sbjct: 4 IDVLDVSGAKTGTVDLPGDIFDAKVNIPLIHQVVVAQLAARRQGTHKAKTRGEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G+ R PQF GG +HGP PR ++ K KK++ L+ ALS RA G+V
Sbjct: 64 PYRQKGTGRARQGSTRAPQFAGGGIVHGPLPRDYSQKTPKKMKAAALRGALSDRANGGRV 123
Query: 221 SLSVSLSLFLRPSFSLSLKN 240
+ +L P +L++
Sbjct: 124 HVVSALVQGETPKTKAALES 143
>gi|147676656|ref|YP_001210871.1| 50S ribosomal protein L4 [Pelotomaculum thermopropionicum SI]
gi|189029511|sp|A5D5J1.1|RL4_PELTS RecName: Full=50S ribosomal protein L4
gi|146272753|dbj|BAF58502.1| ribosomal protein L4 [Pelotomaculum thermopropionicum SI]
Length = 206
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N E G + L ++F V + + ++H V LA R+ GTH TKT SEV G
Sbjct: 1 MPTVALYNTNGEQVGELALKDEIFGVEVHEPVLHDAVVMHLANRRLGTHDTKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRARHG++R P +RGG + GP PR ++ L +KVRRL LK ALSA+
Sbjct: 61 GRKPWRQKGTGRARHGSIRSPLWRGGGIIFGPHPRDYSYSLPRKVRRLALKSALSAKVNS 120
Query: 218 GKVSLSVSLSL 228
G + + L L
Sbjct: 121 GDILVLDELKL 131
>gi|410668886|ref|YP_006921257.1| 50S ribosomal protein L4 [Thermacetogenium phaeum DSM 12270]
gi|409106633|gb|AFV12758.1| 50S ribosomal protein L4 [Thermacetogenium phaeum DSM 12270]
Length = 209
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN + G + L DVF VP+ + ++H+ V LA R+ GT +TKT EV GT
Sbjct: 1 MPKAALFNTEGVRIGEVELRDDVFGVPVNEHVLHQAVVRHLANRRAGTAATKTRGEVQGT 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R P +RGG + GP+PRS+ + +K+RRL LK ALSARA E
Sbjct: 61 GRKPWRQKGTGRARVGSIRSPLWRGGGIVFGPQPRSYRQAMPRKMRRLALKSALSARANE 120
Query: 218 GKVSLSVSLSL 228
G + + + L
Sbjct: 121 GAMIVIEDIQL 131
>gi|303328093|ref|ZP_07358532.1| ribosomal protein L4/L1 family protein [Desulfovibrio sp. 3_1_syn3]
gi|345891281|ref|ZP_08842131.1| 50S ribosomal protein L4 [Desulfovibrio sp. 6_1_46AFAA]
gi|302861919|gb|EFL84854.1| ribosomal protein L4/L1 family protein [Desulfovibrio sp. 3_1_syn3]
gi|345048423|gb|EGW52258.1| 50S ribosomal protein L4 [Desulfovibrio sp. 6_1_46AFAA]
Length = 210
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 81/116 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G M LA DVF++ +R +I++ VVR Q+A ++ GTH+ KT + VSG G K
Sbjct: 4 VKVYDQNKQESGEMTLASDVFEIEVRPEILNLVVRAQMAAKRAGTHNAKTRAFVSGGGVK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
PW+QKGTGRAR G+ R P +RGG + GP PR + K+N KVR L LK+ALS+R A
Sbjct: 64 PWKQKGTGRARSGSNRSPIWRGGAIIFGPSPRDYGFKVNSKVRALALKMALSSRLA 119
>gi|319407425|emb|CBI81076.1| 50S ribosomal protein L4 [Bartonella sp. 1-1C]
Length = 206
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 89/131 (67%), Gaps = 2/131 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DL+I + ++ G + ++ ++F + R+DI+ RVVRWQLA+RQ+GTH ++ S+VS T
Sbjct: 2 DLIIKTLD--GKEAGKLKVSENIFGLTPREDILQRVVRWQLARRQKGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KK+R LGL++ALS +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVIRSHAHNLPKKIRALGLRLALSVKLKT 119
Query: 218 GKVSLSVSLSL 228
+ + LS+
Sbjct: 120 DNLIIVDELSI 130
>gi|338811126|ref|ZP_08623362.1| ribosomal protein L4/L1e [Acetonema longum DSM 6540]
gi|337276949|gb|EGO65350.1| ribosomal protein L4/L1e [Acetonema longum DSM 6540]
Length = 208
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 85/120 (70%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G M L +VF + + ++H+ + QLA R+QGT +TKT ++V G GKK
Sbjct: 4 VAVYNVAGQKTGEMELNENVFGIQFNEAVVHQALVMQLASRRQGTAATKTRAQVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PW+QKGTGRAR G++R P + GG T+ GP+PRS++ ++ +KVRRL +K ALSA+ AEG++
Sbjct: 64 PWKQKGTGRARAGSIRSPLWVGGGTVFGPQPRSYSFRMPRKVRRLAIKSALSAKVAEGEL 123
>gi|114764143|ref|ZP_01443381.1| 50S ribosomal protein L4, partial [Pelagibaca bermudensis HTCC2601]
gi|114543295|gb|EAU46311.1| 50S ribosomal protein L4 [Roseovarius sp. HTCC2601]
Length = 177
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 75/107 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD+ R DI+HRVVRWQ K Q GTH KT SEVS + KK +RQKGTG AR
Sbjct: 14 GEVELTDEIFDLEPRADILHRVVRWQRNKAQAGTHKVKTRSEVSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
HG+ + P FR G GP PRSHA L KKVR+LGLK+ALSA+A G
Sbjct: 74 HGSRKAPIFRKGGIYKGPTPRSHAHDLPKKVRQLGLKLALSAKAKAG 120
>gi|440226338|ref|YP_007333429.1| 50S ribosomal protein L4/L1 [Rhizobium tropici CIAT 899]
gi|440037849|gb|AGB70883.1| 50S ribosomal protein L4/L1 [Rhizobium tropici CIAT 899]
Length = 206
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 77/112 (68%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ +F + R+DI+ RVVRWQLAK+QQGTH K ++V+ TG K +
Sbjct: 5 VKTLEGKDAGKVSLSDAIFGLEPREDILARVVRWQLAKKQQGTHQAKGRADVARTGAKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL+ ALSA+
Sbjct: 65 KQKGTGRARHHSARAPQFRGGGKAHGPVARSHEHDLPKKVRALGLRHALSAK 116
>gi|451942180|ref|YP_007462817.1| 50S ribosomal protein L4 [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
gi|451901567|gb|AGF76029.1| 50S ribosomal protein L4 [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
Length = 207
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 83/117 (70%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DL++ + + G + ++ +F + R+DI+ RV+RWQLA+RQQGTH ++ S+VS T
Sbjct: 3 DLIVKTLD--GNEAGKLKVSEGIFGLVPREDILQRVIRWQLARRQQGTHQSQGRSDVSRT 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KKVR LG+++ALSA+
Sbjct: 61 GAKMFKQKGTGRARHSSARVPQFRGGGKAHGPVFRSHACDLPKKVRALGVRLALSAK 117
>gi|402813925|ref|ZP_10863519.1| 50S ribosomal protein L4 [Paenibacillus alvei DSM 29]
gi|402507772|gb|EJW18293.1| 50S ribosomal protein L4 [Paenibacillus alvei DSM 29]
Length = 207
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 83/128 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L+ VF + K ++H V QLA +QGTH K SEVSG G+K
Sbjct: 4 VAVYNMSGAQVGEIELSDSVFGIEPNKHVLHDAVVMQLASMRQGTHKVKNRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PW+QKGTGRAR G++R PQ+ GG T+ GP PRS+A KL KKVRRL +K ALS++ ++
Sbjct: 64 PWKQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYAYKLPKKVRRLAIKSALSSKVLAEQI 123
Query: 221 SLSVSLSL 228
+ SL+L
Sbjct: 124 IVIDSLAL 131
>gi|260425505|ref|ZP_05779485.1| ribosomal protein, L4/L1 family [Citreicella sp. SE45]
gi|260423445|gb|EEX16695.1| ribosomal protein, L4/L1 family [Citreicella sp. SE45]
Length = 205
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 74/107 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD+ R DI+HRVVRWQ K Q GTH KT SEVS + KK +RQKGTG AR
Sbjct: 14 GEVELTDEIFDLEPRADILHRVVRWQRNKAQAGTHKVKTRSEVSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
HG+ + P FR G GP PRSHA L KKVR LGLK+ALSA+A G
Sbjct: 74 HGSRKAPIFRKGGIYKGPTPRSHAHDLPKKVRALGLKMALSAKAKSG 120
>gi|392944817|ref|ZP_10310459.1| 50S ribosomal protein L4, bacterial/organelle [Frankia sp. QA3]
gi|392288111|gb|EIV94135.1| 50S ribosomal protein L4, bacterial/organelle [Frankia sp. QA3]
Length = 236
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 79/117 (67%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
D G + L G VFDVP+ +IH+VV QLA +QGTH+TKT EV G G+KP+RQKGTGR
Sbjct: 27 DGGSVELPGGVFDVPLNVPLIHQVVVAQLAAARQGTHATKTRGEVRGGGRKPYRQKGTGR 86
Query: 170 ARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSL 226
AR G+LR PQF GG +HGP PR + + KK++ L+ ALS RA +V + SL
Sbjct: 87 ARQGSLRAPQFTGGGIVHGPTPRKYDQRTPKKMKAAALRGALSDRARNNRVHVVSSL 143
>gi|419419754|ref|ZP_13959987.1| ribosomal protein, L4/L1 family [Propionibacterium acnes PRP-38]
gi|422395713|ref|ZP_16475746.1| 50S ribosomal protein L4 [Propionibacterium acnes HL097PA1]
gi|327332710|gb|EGE74444.1| 50S ribosomal protein L4 [Propionibacterium acnes HL097PA1]
gi|379979475|gb|EIA12795.1| ribosomal protein, L4/L1 family [Propionibacterium acnes PRP-38]
Length = 301
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 89/139 (64%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
SG GKKPWRQKGTGRAR G+ R PQ+ GG T+HGP+PRS+A + KK+ L+ ALS
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQWVGGGTVHGPQPRSYAQRTPKKMVAAALRGALSDM 120
Query: 215 AAEGKVSLSVSLSLFLRPS 233
A + ++ + SL +PS
Sbjct: 121 ARDNRIFVVTSLVDGDKPS 139
>gi|340030726|ref|ZP_08666789.1| 50S ribosomal protein L4 [Paracoccus sp. TRP]
Length = 206
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 81/117 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ D+F + R DI+HRVVRWQ AK Q GTHS S+VS + KK +RQKGTG AR
Sbjct: 14 GNIELSDDIFGLEPRADILHRVVRWQRAKAQAGTHSVLGKSDVSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
HG+ + P FR G GP PRSHA L KKVR LGLK ALSA+AA G++ + +L++
Sbjct: 74 HGSRKAPIFRHGGVYKGPTPRSHAFDLPKKVRALGLKHALSAKAAAGELVIVENLNI 130
>gi|422391174|ref|ZP_16471267.1| 50S ribosomal protein L4 [Propionibacterium acnes HL103PA1]
gi|422458947|ref|ZP_16535596.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL050PA2]
gi|422464169|ref|ZP_16540780.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL060PA1]
gi|422566402|ref|ZP_16642036.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL082PA2]
gi|422575121|ref|ZP_16650665.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL001PA1]
gi|314924184|gb|EFS88015.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL001PA1]
gi|314965094|gb|EFT09193.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL082PA2]
gi|315093674|gb|EFT65650.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL060PA1]
gi|315103968|gb|EFT75944.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL050PA2]
gi|327326711|gb|EGE68497.1| 50S ribosomal protein L4 [Propionibacterium acnes HL103PA1]
Length = 301
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 89/139 (64%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
SG GKKPWRQKGTGRAR G+ R PQ+ GG T+HGP+PRS+A + KK+ L+ ALS
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQWVGGGTVHGPQPRSYAQRTPKKMVAAALRGALSDM 120
Query: 215 AAEGKVSLSVSLSLFLRPS 233
A + ++ + SL +PS
Sbjct: 121 ARDNRIFVVTSLVDGDKPS 139
>gi|282855207|ref|ZP_06264539.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
J139]
gi|386070059|ref|YP_005984955.1| ribosomal protein, L4/L1 family [Propionibacterium acnes ATCC
11828]
gi|422467511|ref|ZP_16544063.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA4]
gi|422468957|ref|ZP_16545487.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA3]
gi|282581795|gb|EFB87180.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
J139]
gi|314982252|gb|EFT26345.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA3]
gi|315090439|gb|EFT62415.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA4]
gi|353454426|gb|AER04945.1| ribosomal protein, L4/L1 family [Propionibacterium acnes ATCC
11828]
Length = 301
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 89/139 (64%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
SG GKKPWRQKGTGRAR G+ R PQ+ GG T+HGP+PRS+A + KK+ L+ ALS
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQWVGGGTVHGPQPRSYAQRTPKKMVAAALRGALSDM 120
Query: 215 AAEGKVSLSVSLSLFLRPS 233
A + ++ + SL +PS
Sbjct: 121 ARDNRIFVVTSLVDGDKPS 139
>gi|398829356|ref|ZP_10587554.1| 50S ribosomal protein L4, bacterial/organelle [Phyllobacterium sp.
YR531]
gi|398216841|gb|EJN03381.1| 50S ribosomal protein L4, bacterial/organelle [Phyllobacterium sp.
YR531]
Length = 206
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 78/114 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T D G + L+ ++F + R DI+ R+VR+QLA++QQGTH KT SE++ TG K
Sbjct: 3 LTITTLEGADAGKLKLSEEIFGLEPRDDILQRMVRYQLARKQQGTHKAKTRSEIARTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
++QKGTGRARH + R PQFRGG HGP SHA L KKVR L L+ ALSA+
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGKAHGPVVHSHAHDLPKKVRALALRHALSAK 116
>gi|23502109|ref|NP_698236.1| 50S ribosomal protein L4 [Brucella suis 1330]
gi|62290143|ref|YP_221936.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. 9-941]
gi|82700066|ref|YP_414640.1| 50S ribosomal protein L4 [Brucella melitensis biovar Abortus 2308]
gi|148559402|ref|YP_001259152.1| 50S ribosomal protein L4 [Brucella ovis ATCC 25840]
gi|161619188|ref|YP_001593075.1| 50S ribosomal protein L4 [Brucella canis ATCC 23365]
gi|163843498|ref|YP_001627902.1| 50S ribosomal protein L4 [Brucella suis ATCC 23445]
gi|189024381|ref|YP_001935149.1| 50S ribosomal protein L4 [Brucella abortus S19]
gi|225627702|ref|ZP_03785739.1| 50S ribosomal protein L4 [Brucella ceti str. Cudo]
gi|225852729|ref|YP_002732962.1| 50S ribosomal protein L4 [Brucella melitensis ATCC 23457]
gi|237815651|ref|ZP_04594648.1| 50S ribosomal protein L4 [Brucella abortus str. 2308 A]
gi|256263781|ref|ZP_05466313.1| ribosomal protein L4 [Brucella melitensis bv. 2 str. 63/9]
gi|260546691|ref|ZP_05822430.1| ribosomal protein L4 [Brucella abortus NCTC 8038]
gi|260565516|ref|ZP_05836000.1| ribosomal protein L4/L1e [Brucella melitensis bv. 1 str. 16M]
gi|260566239|ref|ZP_05836709.1| ribosomal protein L4/L1e [Brucella suis bv. 4 str. 40]
gi|260754975|ref|ZP_05867323.1| ribosomal protein L4 [Brucella abortus bv. 6 str. 870]
gi|260758191|ref|ZP_05870539.1| ribosomal protein L4 [Brucella abortus bv. 4 str. 292]
gi|260762017|ref|ZP_05874360.1| ribosomal protein L4 [Brucella abortus bv. 2 str. 86/8/59]
gi|260883984|ref|ZP_05895598.1| ribosomal protein L4 [Brucella abortus bv. 9 str. C68]
gi|261214229|ref|ZP_05928510.1| ribosomal protein L4 [Brucella abortus bv. 3 str. Tulya]
gi|261219580|ref|ZP_05933861.1| ribosomal protein L4 [Brucella ceti M13/05/1]
gi|261314047|ref|ZP_05953244.1| ribosomal protein L4 [Brucella pinnipedialis M163/99/10]
gi|261317866|ref|ZP_05957063.1| ribosomal protein L4 [Brucella pinnipedialis B2/94]
gi|261322075|ref|ZP_05961272.1| ribosomal protein L4 [Brucella ceti M644/93/1]
gi|261325319|ref|ZP_05964516.1| ribosomal protein L4 [Brucella neotomae 5K33]
gi|261752541|ref|ZP_05996250.1| ribosomal protein L4 [Brucella suis bv. 5 str. 513]
gi|261755200|ref|ZP_05998909.1| ribosomal protein L4 [Brucella suis bv. 3 str. 686]
gi|261758424|ref|ZP_06002133.1| ribosomal protein L4 [Brucella sp. F5/99]
gi|265988895|ref|ZP_06101452.1| ribosomal protein L4 [Brucella pinnipedialis M292/94/1]
gi|265991309|ref|ZP_06103866.1| ribosomal protein L4 [Brucella melitensis bv. 1 str. Rev.1]
gi|265995146|ref|ZP_06107703.1| ribosomal protein L4 [Brucella melitensis bv. 3 str. Ether]
gi|297248538|ref|ZP_06932256.1| 50S ribosomal protein L4/L1 [Brucella abortus bv. 5 str. B3196]
gi|306840302|ref|ZP_07473074.1| 50S ribosomal protein L4 [Brucella sp. BO2]
gi|306844136|ref|ZP_07476730.1| 50S ribosomal protein L4 [Brucella inopinata BO1]
gi|340790850|ref|YP_004756315.1| 50S ribosomal protein L4 [Brucella pinnipedialis B2/94]
gi|376273038|ref|YP_005151616.1| 50S ribosomal protein L4 [Brucella abortus A13334]
gi|376276156|ref|YP_005116595.1| 50S ribosomal protein L4 [Brucella canis HSK A52141]
gi|376280903|ref|YP_005154909.1| 50S ribosomal protein L4 [Brucella suis VBI22]
gi|384211599|ref|YP_005600681.1| 50S ribosomal protein L4 [Brucella melitensis M5-90]
gi|384224897|ref|YP_005616061.1| 50S ribosomal protein L4 [Brucella suis 1330]
gi|384408707|ref|YP_005597328.1| 50S ribosomal protein4/L1e [Brucella melitensis M28]
gi|384445287|ref|YP_005604006.1| 50S ribosomal protein L4 [Brucella melitensis NI]
gi|423166674|ref|ZP_17153377.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI435a]
gi|423170952|ref|ZP_17157627.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI474]
gi|423172966|ref|ZP_17159637.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI486]
gi|423178341|ref|ZP_17164985.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI488]
gi|423180382|ref|ZP_17167023.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI010]
gi|423183514|ref|ZP_17170151.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI016]
gi|423185546|ref|ZP_17172160.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI021]
gi|423188681|ref|ZP_17175291.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI259]
gi|46577272|sp|Q8G077.1|RL4_BRUSU RecName: Full=50S ribosomal protein L4
gi|51338733|sp|Q8YHN9.2|RL4_BRUME RecName: Full=50S ribosomal protein L4
gi|75496682|sp|Q57CQ9.1|RL4_BRUAB RecName: Full=50S ribosomal protein L4
gi|109893579|sp|Q2YM04.1|RL4_BRUA2 RecName: Full=50S ribosomal protein L4
gi|166234640|sp|A5VR05.1|RL4_BRUO2 RecName: Full=50S ribosomal protein L4
gi|189029492|sp|A9M5P9.1|RL4_BRUC2 RecName: Full=50S ribosomal protein L4
gi|189029493|sp|B0CH31.1|RL4_BRUSI RecName: Full=50S ribosomal protein L4
gi|226730626|sp|B2S678.1|RL4_BRUA1 RecName: Full=50S ribosomal protein L4
gi|254803720|sp|C0RJK0.1|RL4_BRUMB RecName: Full=50S ribosomal protein L4
gi|23348069|gb|AAN30151.1| ribosomal protein L4 [Brucella suis 1330]
gi|62196275|gb|AAX74575.1| RplD, ribosomal protein L4 [Brucella abortus bv. 1 str. 9-941]
gi|82616167|emb|CAJ11210.1| Ribosomal protein L4/L1e [Brucella melitensis biovar Abortus 2308]
gi|82798166|gb|ABB91835.1| ribosomal protein L4 [Brucella abortus]
gi|82798168|gb|ABB91836.1| ribosomal protein L4 [Brucella abortus]
gi|82798170|gb|ABB91837.1| ribosomal protein L4 [Brucella abortus]
gi|82798172|gb|ABB91838.1| ribosomal protein L4 [Brucella abortus]
gi|82798174|gb|ABB91839.1| ribosomal protein L4 [Brucella abortus]
gi|82798176|gb|ABB91840.1| ribosomal protein L4 [Brucella abortus]
gi|82798178|gb|ABB91841.1| ribosomal protein L4 [Brucella abortus]
gi|82798180|gb|ABB91842.1| ribosomal protein L4 [Brucella canis]
gi|82798182|gb|ABB91843.1| ribosomal protein L4 [Brucella melitensis biovar Melitensis]
gi|82798184|gb|ABB91844.1| ribosomal protein L4 [Brucella melitensis biovar Melitensis]
gi|82798186|gb|ABB91845.1| ribosomal protein L4 [Brucella melitensis biovar Melitensis]
gi|82798188|gb|ABB91846.1| ribosomal protein L4 [Brucella neotomae 5K33]
gi|82798190|gb|ABB91847.1| ribosomal protein L4 [Brucella ovis]
gi|82798192|gb|ABB91848.1| ribosomal protein L4 [Brucella suis 1330]
gi|82798194|gb|ABB91849.1| ribosomal protein L4 [Brucella suis ATCC 23445]
gi|82798196|gb|ABB91850.1| ribosomal protein L4 [Brucella suis bv. 3 str. 686]
gi|82798198|gb|ABB91851.1| ribosomal protein L4 [Brucella suis bv. 4 str. 40]
gi|82798200|gb|ABB91852.1| ribosomal protein L4 [Brucella suis]
gi|82798202|gb|ABB91853.1| ribosomal protein L4 [Brucella pinnipedialis]
gi|82798204|gb|ABB91854.1| ribosomal protein L4 [Brucella ceti]
gi|148370659|gb|ABQ60638.1| ribosomal protein L4 [Brucella ovis ATCC 25840]
gi|161335999|gb|ABX62304.1| 50S ribosomal protein L4 [Brucella canis ATCC 23365]
gi|163674221|gb|ABY38332.1| 50S ribosomal protein L4 [Brucella suis ATCC 23445]
gi|189019953|gb|ACD72675.1| Ribosomal protein L4/L1e [Brucella abortus S19]
gi|225617707|gb|EEH14752.1| 50S ribosomal protein L4 [Brucella ceti str. Cudo]
gi|225641094|gb|ACO01008.1| 50S ribosomal protein L4 [Brucella melitensis ATCC 23457]
gi|237788949|gb|EEP63160.1| 50S ribosomal protein L4 [Brucella abortus str. 2308 A]
gi|260095741|gb|EEW79618.1| ribosomal protein L4 [Brucella abortus NCTC 8038]
gi|260151584|gb|EEW86678.1| ribosomal protein L4/L1e [Brucella melitensis bv. 1 str. 16M]
gi|260155757|gb|EEW90837.1| ribosomal protein L4/L1e [Brucella suis bv. 4 str. 40]
gi|260668509|gb|EEX55449.1| ribosomal protein L4 [Brucella abortus bv. 4 str. 292]
gi|260672449|gb|EEX59270.1| ribosomal protein L4 [Brucella abortus bv. 2 str. 86/8/59]
gi|260675083|gb|EEX61904.1| ribosomal protein L4 [Brucella abortus bv. 6 str. 870]
gi|260873512|gb|EEX80581.1| ribosomal protein L4 [Brucella abortus bv. 9 str. C68]
gi|260915836|gb|EEX82697.1| ribosomal protein L4 [Brucella abortus bv. 3 str. Tulya]
gi|260924669|gb|EEX91237.1| ribosomal protein L4 [Brucella ceti M13/05/1]
gi|261294765|gb|EEX98261.1| ribosomal protein L4 [Brucella ceti M644/93/1]
gi|261297089|gb|EEY00586.1| ribosomal protein L4 [Brucella pinnipedialis B2/94]
gi|261301299|gb|EEY04796.1| ribosomal protein L4 [Brucella neotomae 5K33]
gi|261303073|gb|EEY06570.1| ribosomal protein L4 [Brucella pinnipedialis M163/99/10]
gi|261738408|gb|EEY26404.1| ribosomal protein L4 [Brucella sp. F5/99]
gi|261742294|gb|EEY30220.1| ribosomal protein L4 [Brucella suis bv. 5 str. 513]
gi|261744953|gb|EEY32879.1| ribosomal protein L4 [Brucella suis bv. 3 str. 686]
gi|262766259|gb|EEZ12048.1| ribosomal protein L4 [Brucella melitensis bv. 3 str. Ether]
gi|263002093|gb|EEZ14668.1| ribosomal protein L4 [Brucella melitensis bv. 1 str. Rev.1]
gi|263093909|gb|EEZ17843.1| ribosomal protein L4 [Brucella melitensis bv. 2 str. 63/9]
gi|264661092|gb|EEZ31353.1| ribosomal protein L4 [Brucella pinnipedialis M292/94/1]
gi|297175707|gb|EFH35054.1| 50S ribosomal protein L4/L1 [Brucella abortus bv. 5 str. B3196]
gi|306275579|gb|EFM57311.1| 50S ribosomal protein L4 [Brucella inopinata BO1]
gi|306289701|gb|EFM60890.1| 50S ribosomal protein L4 [Brucella sp. BO2]
gi|326409254|gb|ADZ66319.1| Ribosomal protein L4/L1e [Brucella melitensis M28]
gi|326538962|gb|ADZ87177.1| 50S ribosomal protein L4 [Brucella melitensis M5-90]
gi|340559309|gb|AEK54547.1| 50S ribosomal protein L4 [Brucella pinnipedialis B2/94]
gi|343383077|gb|AEM18569.1| 50S ribosomal protein L4 [Brucella suis 1330]
gi|349743278|gb|AEQ08821.1| 50S ribosomal protein L4 [Brucella melitensis NI]
gi|358258502|gb|AEU06237.1| 50S ribosomal protein L4 [Brucella suis VBI22]
gi|363400644|gb|AEW17614.1| 50S ribosomal protein L4 [Brucella abortus A13334]
gi|363404723|gb|AEW15018.1| 50S ribosomal protein L4 [Brucella canis HSK A52141]
gi|374539530|gb|EHR11034.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI474]
gi|374542905|gb|EHR14389.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI435a]
gi|374543521|gb|EHR15003.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI486]
gi|374545580|gb|EHR17041.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI488]
gi|374548946|gb|EHR20393.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI010]
gi|374549577|gb|EHR21020.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI016]
gi|374558339|gb|EHR29732.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI259]
gi|374559637|gb|EHR31022.1| 50S ribosomal protein L4 [Brucella abortus bv. 1 str. NI021]
Length = 206
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 78/115 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
++QKGTGRARH + R PQFRGG HGP R+H L KKVR LGL+ ALSA+A
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGQAHGPVVRNHDHDLPKKVRALGLRHALSAKA 117
>gi|317131370|ref|YP_004090684.1| 50S ribosomal protein L4 [Ethanoligenens harbinense YUAN-3]
gi|315469349|gb|ADU25953.1| ribosomal protein L4/L1e [Ethanoligenens harbinense YUAN-3]
Length = 207
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 82/126 (65%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V N E G + LA VF + K +H VV LA ++QGT ST T SEVSG G+KPW
Sbjct: 6 VFNIAGEQVGEIELADSVFGIEPNKTALHTVVVNYLANQRQGTQSTLTRSEVSGGGRKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
RQKGTG AR G+ R PQ++ G GPKPRS+ +NKKVRRL LK ALSA+ A G++ +
Sbjct: 66 RQKGTGHARQGSTRAPQWKHGGIALGPKPRSYTYTVNKKVRRLALKSALSAKLAAGELVV 125
Query: 223 SVSLSL 228
++SL
Sbjct: 126 LDAISL 131
>gi|336179781|ref|YP_004585156.1| 50S ribosomal protein L4 [Frankia symbiont of Datisca glomerata]
gi|334860761|gb|AEH11235.1| ribosomal protein L4/L1e [Frankia symbiont of Datisca glomerata]
Length = 263
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 80/113 (70%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G + L G++FDV + +IH+VV QLA +QGTHST+T EV G G+KP+RQKGTGR
Sbjct: 37 EAGSVDLPGEIFDVALNVPLIHQVVVAQLAAARQGTHSTRTRGEVRGGGRKPYRQKGTGR 96
Query: 170 ARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
AR G+LR PQF GG +HGPKPRS+ + KK++ L+ ALS RA G+V +
Sbjct: 97 ARQGSLRAPQFTGGGVVHGPKPRSYEQRTPKKMKAAALRGALSDRARGGRVHV 149
>gi|294852569|ref|ZP_06793242.1| 50S ribosomal protein L4/L1 [Brucella sp. NVSL 07-0026]
gi|294821158|gb|EFG38157.1| 50S ribosomal protein L4/L1 [Brucella sp. NVSL 07-0026]
Length = 206
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 78/115 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
++QKGTGRARH + R PQFRGG HGP R+H L KKVR LGL+ ALSA+A
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGQAHGPVVRNHDHDLPKKVRALGLRHALSAKA 117
>gi|347730657|ref|ZP_08863771.1| 50S ribosomal protein L4 [Desulfovibrio sp. A2]
gi|347520576|gb|EGY27707.1| 50S ribosomal protein L4 [Desulfovibrio sp. A2]
Length = 206
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 84/119 (70%), Gaps = 3/119 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+ V +++DK G + LA +VF+V ++ +I++ VVR A + GTH+TKT + VSG
Sbjct: 1 MAVVKVYDQDKKEAGELTLAPEVFEVEVKPEILNLVVRAHRAGLRSGTHATKTRAFVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
G KPWRQKGTGRAR G+ R P +RGG + GP+PR + K+NKKVR+L LK+ALS+R A
Sbjct: 61 GAKPWRQKGTGRARSGSNRSPIWRGGAVIFGPQPREYGFKINKKVRQLALKMALSSRLA 119
>gi|417933024|ref|ZP_12576358.1| 50S ribosomal protein L4 [Propionibacterium acnes SK182B-JCVI]
gi|340772943|gb|EGR95438.1| 50S ribosomal protein L4 [Propionibacterium acnes SK182B-JCVI]
Length = 301
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 88/139 (63%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GDVFD +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDVFDANTNIPLIHQVVIAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
SG GKKPWRQKGTGRAR G+ R PQ+ GG T+HGP+PRS+A + KK+ L+ ALS
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQWVGGGTVHGPQPRSYAQRTPKKMVAAALRGALSDM 120
Query: 215 AAEGKVSLSVSLSLFLRPS 233
A + ++ + SL +PS
Sbjct: 121 ARDNRIFVVTSLVDGDKPS 139
>gi|298531084|ref|ZP_07018485.1| ribosomal protein L4/L1e [Desulfonatronospira thiodismutans ASO3-1]
gi|298509107|gb|EFI33012.1| ribosomal protein L4/L1e [Desulfonatronospira thiodismutans ASO3-1]
Length = 206
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
N++ G + L +VF V ++ +++H+ VR A + GT K + +SG G+KPWRQKGT
Sbjct: 11 NQEVGEIDLQENVFSVSVKPELMHQAVRAHRAAVRSGTVGVKNRALISGGGRKPWRQKGT 70
Query: 168 GRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLS 227
GRAR GT R P +RGG +HGPK R ++IKLNKKVRRL LK+ALS + A+ K+ + +L
Sbjct: 71 GRARAGTGRSPLWRGGAVIHGPKARDYSIKLNKKVRRLALKMALSTKYAQDKLQILDNLD 130
Query: 228 LF-LRPSFSLSLKNT 241
L +R +S+KN
Sbjct: 131 LSRIRTKDFVSIKNN 145
>gi|422481184|ref|ZP_16557586.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL063PA1]
gi|313824893|gb|EFS62607.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL063PA1]
Length = 301
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 89/139 (64%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
SG GKKPWRQKGTGRAR G+ R PQ+ GG T+HGP+PRS+A + KK+ L+ ALS
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQWVGGGTVHGPQPRSYAQRTPKKMVGAALRGALSDM 120
Query: 215 AAEGKVSLSVSLSLFLRPS 233
A + ++ + SL +PS
Sbjct: 121 ARDNRIFVVTSLVDGDKPS 139
>gi|326385098|ref|ZP_08206768.1| 50S ribosomal protein L4 [Gordonia neofelifaecis NRRL B-59395]
gi|326196183|gb|EGD53387.1| 50S ribosomal protein L4 [Gordonia neofelifaecis NRRL B-59395]
Length = 219
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 87/141 (61%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V N + G + L ++FDV ++H+VV Q A +QGTHSTKT +V+G G
Sbjct: 9 LTLDVRNADGTNNGTVDLPAELFDVTANIALMHQVVVAQQAAGRQGTHSTKTRGQVAGGG 68
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KP+RQKGTGRAR G++R PQF GG T+HGP+PR + K+NKKV+ L+ ALS RA
Sbjct: 69 AKPYRQKGTGRARQGSIRAPQFTGGGTVHGPQPRDYTQKVNKKVKAAALRGALSDRARNE 128
Query: 219 KVSLSVSLSLFLRPSFSLSLK 239
++ + L PS + K
Sbjct: 129 RIHVVTELVAGQTPSTKAARK 149
>gi|289427743|ref|ZP_06429455.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
J165]
gi|295131386|ref|YP_003582049.1| ribosomal protein, L4/L1 family [Propionibacterium acnes SK137]
gi|335052497|ref|ZP_08545383.1| 50S ribosomal protein L4 [Propionibacterium sp. 409-HC1]
gi|342211839|ref|ZP_08704564.1| 50S ribosomal protein L4 [Propionibacterium sp. CC003-HC2]
gi|354607577|ref|ZP_09025546.1| 50S ribosomal protein L4 [Propionibacterium sp. 5_U_42AFAA]
gi|365963507|ref|YP_004945073.1| ribosomal protein, L4/L1 family [Propionibacterium acnes TypeIA2
P.acn31]
gi|365965751|ref|YP_004947316.1| ribosomal protein, L4/L1 family [Propionibacterium acnes TypeIA2
P.acn17]
gi|365974686|ref|YP_004956245.1| ribosomal protein, L4/L1 family [Propionibacterium acnes TypeIA2
P.acn33]
gi|386024799|ref|YP_005943104.1| 50S ribosomal protein L4 [Propionibacterium acnes 266]
gi|407936243|ref|YP_006851885.1| 50S ribosomal protein L4 [Propionibacterium acnes C1]
gi|417930104|ref|ZP_12573484.1| 50S ribosomal protein L4 [Propionibacterium acnes SK182]
gi|422386376|ref|ZP_16466496.1| 50S ribosomal protein L4 [Propionibacterium acnes HL096PA3]
gi|422388799|ref|ZP_16468899.1| 50S ribosomal protein L4 [Propionibacterium acnes HL096PA2]
gi|422392519|ref|ZP_16472588.1| 50S ribosomal protein L4 [Propionibacterium acnes HL099PA1]
gi|422425705|ref|ZP_16502635.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL043PA1]
gi|422428746|ref|ZP_16505656.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL087PA1]
gi|422429718|ref|ZP_16506614.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL072PA2]
gi|422433913|ref|ZP_16510777.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL059PA2]
gi|422436515|ref|ZP_16513364.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL083PA2]
gi|422438982|ref|ZP_16515819.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL092PA1]
gi|422443903|ref|ZP_16520700.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL002PA1]
gi|422444527|ref|ZP_16521311.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL027PA1]
gi|422448524|ref|ZP_16525251.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL036PA3]
gi|422453941|ref|ZP_16530622.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL087PA3]
gi|422461318|ref|ZP_16537948.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL038PA1]
gi|422475875|ref|ZP_16552319.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL056PA1]
gi|422478508|ref|ZP_16554929.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL007PA1]
gi|422483693|ref|ZP_16560081.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL036PA1]
gi|422484317|ref|ZP_16560695.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL043PA2]
gi|422486921|ref|ZP_16563264.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL013PA2]
gi|422490067|ref|ZP_16566388.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL020PA1]
gi|422493845|ref|ZP_16570142.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL086PA1]
gi|422496555|ref|ZP_16572839.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL025PA1]
gi|422497184|ref|ZP_16573459.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL002PA3]
gi|422500587|ref|ZP_16576842.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL063PA2]
gi|422503594|ref|ZP_16579832.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL027PA2]
gi|422505811|ref|ZP_16582040.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL036PA2]
gi|422508789|ref|ZP_16584948.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL046PA2]
gi|422510211|ref|ZP_16586359.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL059PA1]
gi|422512200|ref|ZP_16588335.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL087PA2]
gi|422517137|ref|ZP_16593242.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA2]
gi|422517731|ref|ZP_16593822.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL074PA1]
gi|422522290|ref|ZP_16598316.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL045PA1]
gi|422525062|ref|ZP_16601070.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL053PA2]
gi|422526778|ref|ZP_16602771.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL083PA1]
gi|422529981|ref|ZP_16605946.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL053PA1]
gi|422531032|ref|ZP_16606981.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA1]
gi|422532943|ref|ZP_16608885.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL072PA1]
gi|422538119|ref|ZP_16613998.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL078PA1]
gi|422540702|ref|ZP_16616567.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL013PA1]
gi|422540764|ref|ZP_16616626.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL037PA1]
gi|422544806|ref|ZP_16620641.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL082PA1]
gi|422548442|ref|ZP_16624257.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL050PA3]
gi|422550135|ref|ZP_16625934.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL050PA1]
gi|422553277|ref|ZP_16629063.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA3]
gi|422555941|ref|ZP_16631702.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA2]
gi|422557849|ref|ZP_16633590.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL025PA2]
gi|422559813|ref|ZP_16635528.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA1]
gi|422563744|ref|ZP_16639419.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL046PA1]
gi|422568168|ref|ZP_16643792.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL002PA2]
gi|422571652|ref|ZP_16647234.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL067PA1]
gi|422579624|ref|ZP_16655143.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA4]
gi|289159234|gb|EFD07426.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
J165]
gi|291376076|gb|ADD99930.1| ribosomal protein, L4/L1 family [Propionibacterium acnes SK137]
gi|313763237|gb|EFS34601.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL013PA1]
gi|313773096|gb|EFS39062.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL074PA1]
gi|313793259|gb|EFS41317.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA1]
gi|313801097|gb|EFS42365.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL110PA2]
gi|313808838|gb|EFS47292.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL087PA2]
gi|313810368|gb|EFS48082.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL083PA1]
gi|313812296|gb|EFS50010.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL025PA1]
gi|313816573|gb|EFS54287.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL059PA1]
gi|313818018|gb|EFS55732.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL046PA2]
gi|313819931|gb|EFS57645.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL036PA1]
gi|313823421|gb|EFS61135.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL036PA2]
gi|313828365|gb|EFS66079.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL063PA2]
gi|313830135|gb|EFS67849.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL007PA1]
gi|313832594|gb|EFS70308.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL056PA1]
gi|313837950|gb|EFS75664.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL086PA1]
gi|314914333|gb|EFS78164.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA4]
gi|314917653|gb|EFS81484.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL050PA1]
gi|314919615|gb|EFS83446.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL050PA3]
gi|314925787|gb|EFS89618.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL036PA3]
gi|314930206|gb|EFS94037.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL067PA1]
gi|314957187|gb|EFT01291.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL027PA1]
gi|314957763|gb|EFT01866.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL002PA1]
gi|314960867|gb|EFT04968.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL002PA2]
gi|314963541|gb|EFT07641.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL082PA1]
gi|314969876|gb|EFT13974.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL037PA1]
gi|314973016|gb|EFT17112.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL053PA1]
gi|314975512|gb|EFT19607.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL045PA1]
gi|314979746|gb|EFT23840.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL072PA2]
gi|314984888|gb|EFT28980.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA1]
gi|314986054|gb|EFT30146.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA2]
gi|314988670|gb|EFT32761.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL005PA3]
gi|315077164|gb|EFT49231.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL053PA2]
gi|315079849|gb|EFT51825.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL078PA1]
gi|315083217|gb|EFT55193.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL027PA2]
gi|315086829|gb|EFT58805.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL002PA3]
gi|315089922|gb|EFT61898.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL072PA1]
gi|315096756|gb|EFT68732.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL038PA1]
gi|315097984|gb|EFT69960.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL059PA2]
gi|315100627|gb|EFT72603.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL046PA1]
gi|327325170|gb|EGE66976.1| 50S ribosomal protein L4 [Propionibacterium acnes HL096PA3]
gi|327325200|gb|EGE67005.1| 50S ribosomal protein L4 [Propionibacterium acnes HL096PA2]
gi|327444001|gb|EGE90655.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL043PA1]
gi|327449371|gb|EGE96025.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL013PA2]
gi|327449401|gb|EGE96055.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL043PA2]
gi|327451422|gb|EGE98076.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL087PA3]
gi|327451603|gb|EGE98257.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL092PA1]
gi|327451890|gb|EGE98544.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL083PA2]
gi|328752104|gb|EGF65720.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL087PA1]
gi|328755500|gb|EGF69116.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL025PA2]
gi|328756284|gb|EGF69900.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL020PA1]
gi|328761382|gb|EGF74909.1| 50S ribosomal protein L4 [Propionibacterium acnes HL099PA1]
gi|332676257|gb|AEE73073.1| 50S ribosomal protein L4 [Propionibacterium acnes 266]
gi|333763814|gb|EGL41239.1| 50S ribosomal protein L4 [Propionibacterium sp. 409-HC1]
gi|340767383|gb|EGR89908.1| 50S ribosomal protein L4 [Propionibacterium sp. CC003-HC2]
gi|340772791|gb|EGR95292.1| 50S ribosomal protein L4 [Propionibacterium acnes SK182]
gi|353556596|gb|EHC25966.1| 50S ribosomal protein L4 [Propionibacterium sp. 5_U_42AFAA]
gi|365740188|gb|AEW84390.1| ribosomal protein, L4/L1 family [Propionibacterium acnes TypeIA2
P.acn31]
gi|365742432|gb|AEW82126.1| ribosomal protein, L4/L1 family [Propionibacterium acnes TypeIA2
P.acn17]
gi|365744685|gb|AEW79882.1| ribosomal protein, L4/L1 family [Propionibacterium acnes TypeIA2
P.acn33]
gi|407904824|gb|AFU41654.1| 50S ribosomal protein L4 [Propionibacterium acnes C1]
gi|456738948|gb|EMF63515.1| 50S ribosomal protein L4 [Propionibacterium acnes FZ1/2/0]
Length = 301
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 89/139 (64%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
SG GKKPWRQKGTGRAR G+ R PQ+ GG T+HGP+PRS+A + KK+ L+ ALS
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQWVGGGTVHGPQPRSYAQRTPKKMVGAALRGALSDM 120
Query: 215 AAEGKVSLSVSLSLFLRPS 233
A + ++ + SL +PS
Sbjct: 121 ARDNRIFVVTSLVDGDKPS 139
>gi|50843317|ref|YP_056544.1| 50S ribosomal protein L4 [Propionibacterium acnes KPA171202]
gi|335053586|ref|ZP_08546422.1| 50S ribosomal protein L4 [Propionibacterium sp. 434-HC2]
gi|387504227|ref|YP_005945456.1| 50S ribosomal protein L4 [Propionibacterium acnes 6609]
gi|422456901|ref|ZP_16533564.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL030PA1]
gi|81611203|sp|Q6A6M7.1|RL4_PROAC RecName: Full=50S ribosomal protein L4
gi|50840919|gb|AAT83586.1| 50S ribosomal protein L4 [Propionibacterium acnes KPA171202]
gi|315106072|gb|EFT78048.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL030PA1]
gi|333766847|gb|EGL44129.1| 50S ribosomal protein L4 [Propionibacterium sp. 434-HC2]
gi|335278272|gb|AEH30177.1| 50S ribosomal protein L4 [Propionibacterium acnes 6609]
Length = 301
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 89/139 (64%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
SG GKKPWRQKGTGRAR G+ R PQ+ GG T+HGP+PRS+A + KK+ L+ ALS
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQWVGGGTVHGPQPRSYAQRTPKKMVGAALRGALSDM 120
Query: 215 AAEGKVSLSVSLSLFLRPS 233
A + ++ + SL +PS
Sbjct: 121 ARDNRIFVVTSLVDGDKPS 139
>gi|336116749|ref|YP_004571516.1| 50S ribosomal protein L4 [Microlunatus phosphovorus NM-1]
gi|334684528|dbj|BAK34113.1| 50S ribosomal protein L4 [Microlunatus phosphovorus NM-1]
Length = 235
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 87/138 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + G + L D+FDV +IH+VV QLA +QGTH+ KT SEV+G G K
Sbjct: 7 IDVIDADGGTSGSVELPADLFDVNANIPLIHQVVVAQLAAARQGTHAVKTRSEVAGGGAK 66
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G++R PQ+ GG +HGP+PR +A + KK+ L+ ALS RA +G+V
Sbjct: 67 PYRQKGTGRARQGSIRAPQYTGGGIVHGPQPRDYAQRTPKKMIAAALRGALSDRARDGRV 126
Query: 221 SLSVSLSLFLRPSFSLSL 238
+ L++ PS +L
Sbjct: 127 HVVADLTIGDAPSTKTAL 144
>gi|303284373|ref|XP_003061477.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456807|gb|EEH54107.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 252
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 81/126 (64%), Gaps = 1/126 (0%)
Query: 98 DLVIPVTNFFNEDKG-FMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSG 156
D +PV G ++L G FD P+R D++HRVV WQ K ++G TKT EVSG
Sbjct: 1 DKTLPVFTIDGTPTGETLILPGRHFDQPLRVDLVHRVVHWQRNKARKGRKKTKTRGEVSG 60
Query: 157 TGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
T +K QKG GRAR G+LR PQ RGG HGP RS+ LNK+VRR GLK+ALSA+ A
Sbjct: 61 TTRKARPQKGGGRARVGSLRAPQMRGGGVAHGPVVRSYETALNKRVRRAGLKVALSAKLA 120
Query: 217 EGKVSL 222
EG+V L
Sbjct: 121 EGRVML 126
>gi|86739296|ref|YP_479696.1| 50S ribosomal protein L4 [Frankia sp. CcI3]
gi|109893595|sp|Q2JFH5.1|RL4_FRASC RecName: Full=50S ribosomal protein L4
gi|86566158|gb|ABD09967.1| LSU ribosomal protein L4P [Frankia sp. CcI3]
Length = 245
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 81/124 (65%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G + L G VFDVP+ +IH+VV QLA +QGTH TKT EV G G+KP+RQKGTGR
Sbjct: 25 EGGSVELPGGVFDVPLNIPLIHQVVVAQLAAARQGTHDTKTRGEVRGGGRKPYRQKGTGR 84
Query: 170 ARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLF 229
AR G+LR PQF GG T+HGP PR + + KK++ L+ ALS RA +V + SL
Sbjct: 85 ARQGSLRAPQFTGGGTVHGPTPRRYDQRTPKKMKAAALRGALSDRARNNRVHVVSSLVSG 144
Query: 230 LRPS 233
PS
Sbjct: 145 ETPS 148
>gi|336430425|ref|ZP_08610372.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336018234|gb|EGN47986.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 206
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 78/120 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L+ VF V + + ++H V WQLA ++QGT KT SEVSG G+K
Sbjct: 4 VAVFNMEGKEVGTLDLSDAVFGVEVNEHLVHMAVVWQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ+ GG + P PR ++ KLNKK +R LK AL++R E K+
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPVPRDYSFKLNKKEKRAALKSALTSRVQENKL 123
>gi|260891593|ref|ZP_05902856.1| hypothetical protein GCWU000323_02808 [Leptotrichia hofstadii
F0254]
gi|260858701|gb|EEX73201.1| ribosomal protein L4/L1 family protein [Leptotrichia hofstadii
F0254]
Length = 214
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 83/123 (67%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+PV N + D G + + DVF + K ++H V+ +LA+ +QG+ STKT +EV G
Sbjct: 1 MPVLNIYKLDGSQAGTIEVNNDVFGIEPNKHVMHEVLVAELAEARQGSASTKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KP+RQKGTGRAR G+ R P GG +HGPKPR++A K+NKKVR+L LK AL+ + E
Sbjct: 61 GRKPFRQKGTGRARQGSTRAPHMVGGGVVHGPKPRNYAKKVNKKVRKLALKSALATKINE 120
Query: 218 GKV 220
G V
Sbjct: 121 GNV 123
>gi|153812866|ref|ZP_01965534.1| hypothetical protein RUMOBE_03273 [Ruminococcus obeum ATCC 29174]
gi|149831078|gb|EDM86167.1| 50S ribosomal protein L4 [Ruminococcus obeum ATCC 29174]
Length = 206
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 80/128 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G M L VF V I + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VTVYNMEGNEVGTMELNDAVFGVEINEHLVHLAVVRQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G++R PQ+ GG + P PR + +K+NKK RR LK AL+++ E K+
Sbjct: 64 PWRQKGTGHARQGSIRAPQWTGGGVVFAPVPRDYEVKMNKKERRAALKSALTSKVQENKL 123
Query: 221 SLSVSLSL 228
+ SL+L
Sbjct: 124 VVVDSLAL 131
>gi|422451192|ref|ZP_16527896.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL030PA2]
gi|315109231|gb|EFT81207.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
HL030PA2]
Length = 301
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 89/139 (64%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
SG GKKPWRQKGTGRAR G+ R PQ+ GG T+HGP+PRS+A + KK+ L+ ALS
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQWVGGGTVHGPQPRSYAQRTPKKMVGAALRGALSDM 120
Query: 215 AAEGKVSLSVSLSLFLRPS 233
A + ++ + SL +PS
Sbjct: 121 ARDNRIFVVTSLVDGDKPS 139
>gi|379707020|ref|YP_005262225.1| 50S ribosomal protein L4 [Nocardia cyriacigeorgica GUH-2]
gi|374844519|emb|CCF61581.1| 50S ribosomal protein L4 [Nocardia cyriacigeorgica GUH-2]
Length = 226
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 84/136 (61%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L +PV + G + L ++FD ++H+VV QLA +QGTHSTKT EV G
Sbjct: 11 NLTLPVKELGGKTNGTVELPAEIFDATANIALMHQVVVAQLAAARQGTHSTKTRGEVRGG 70
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKP+RQKGTGRAR G+ R PQF GG T+HGPKPR ++ + KK+ R L+ ALS RA
Sbjct: 71 GKKPYRQKGTGRARQGSTRAPQFAGGGTVHGPKPRDYSQRTPKKMIRAALRGALSDRARN 130
Query: 218 GKVSLSVSLSLFLRPS 233
++ + L PS
Sbjct: 131 ERIHVISELVAGQTPS 146
>gi|295093644|emb|CBK82735.1| LSU ribosomal protein L4P [Coprococcus sp. ART55/1]
Length = 206
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 76/109 (69%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VF V I + I+H+ V QLA +QGT S KT SEVSG G+KPWRQKGTG AR G+ R PQ
Sbjct: 23 VFGVEINEHIMHKAVVGQLANNRQGTQSAKTRSEVSGGGRKPWRQKGTGHARQGSTRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
+ GG + PKPR +++K+NKK ++L +K ALS++ AE K+ + L L
Sbjct: 83 WTGGGVVFAPKPRDYSVKMNKKEKQLAMKSALSSKVAENKLVVVDKLDL 131
>gi|451947650|ref|YP_007468245.1| 50S ribosomal protein L4, bacterial/organelle [Desulfocapsa
sulfexigens DSM 10523]
gi|451906998|gb|AGF78592.1| 50S ribosomal protein L4, bacterial/organelle [Desulfocapsa
sulfexigens DSM 10523]
Length = 207
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 79/120 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N NE G + L DVFD+ +++ ++H VVR Q A ++ G STKT EV G G K
Sbjct: 4 VDIVNTSNEKVGEIELNADVFDLTVKEHLLHDVVRMQRAAKRAGNASTKTRREVRGGGAK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PW+QKGTGRAR GT P +RGG GPKPR ++ KLN+KV++ L +A+SAR EG +
Sbjct: 64 PWKQKGTGRARAGTRNSPIWRGGGVTFGPKPRDYSFKLNRKVKQQALAMAMSARLQEGNL 123
>gi|374298075|ref|YP_005048266.1| 50S ribosomal protein L4 [Clostridium clariflavum DSM 19732]
gi|359827569|gb|AEV70342.1| LSU ribosomal protein L4P [Clostridium clariflavum DSM 19732]
Length = 207
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 81/116 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ +VF V + K+++H+VV QLA ++QGT STKT SEV G G KPWRQKGTGRAR
Sbjct: 15 GDINLSDEVFGVEVNKEVVHQVVVNQLANKRQGTQSTKTKSEVRGGGIKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLS 227
HG++R Q+ G + GPKPRS+ L KKVRRL LK LS++ E ++ + LS
Sbjct: 75 HGSIRSAQWVKGGIVLGPKPRSYRYTLPKKVRRLALKSVLSSKVNENEIIVLDKLS 130
>gi|395789499|ref|ZP_10469019.1| 50S ribosomal protein L4 [Bartonella taylorii 8TBB]
gi|395430042|gb|EJF96094.1| 50S ribosomal protein L4 [Bartonella taylorii 8TBB]
Length = 206
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +F + R+DI+ RV+ WQLA+RQQGTH ++ S+VS T
Sbjct: 2 DLVIKTLD--GNEAGKLKVSEAIFGLVPREDILQRVILWQLARRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KK+R LGL++ALSA+
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVTRSHAHDLPKKIRALGLRLALSAK 116
>gi|418460805|ref|ZP_13031892.1| 50S ribosomal protein L4 [Saccharomonospora azurea SZMC 14600]
gi|359739113|gb|EHK87986.1| 50S ribosomal protein L4 [Saccharomonospora azurea SZMC 14600]
Length = 228
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 82/125 (65%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E +G + L G++FDV ++H+VV Q+A +QGTH TKT EV G G+KP+RQKGTG
Sbjct: 13 EAQGTVELPGEIFDVQANIALMHQVVVAQMAAARQGTHDTKTRGEVRGGGRKPYRQKGTG 72
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQF GG T+HGP PR + + KK++ L+ ALS RA G+V + L
Sbjct: 73 RARQGSVRAPQFAGGGTVHGPTPRDYTQRTPKKMKAAALRGALSDRARAGQVHVITELVT 132
Query: 229 FLRPS 233
+PS
Sbjct: 133 GEKPS 137
>gi|297588192|ref|ZP_06946836.1| ribosomal protein L4/L1 family protein [Finegoldia magna ATCC
53516]
gi|297574881|gb|EFH93601.1| ribosomal protein L4/L1 family protein [Finegoldia magna ATCC
53516]
Length = 207
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 84/128 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E+ G + L +F V + + +++ VVR QLA ++QGT S KT SEV G GKK
Sbjct: 4 VQILNQQGENVGELELNEAIFGVDVNEHVVYEVVRNQLANKRQGTQSAKTRSEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+RGG + PKPR ++ + KKVRRL +K L+ + + ++
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFAPKPRDYSYAVPKKVRRLAIKSVLTDKVNDNEM 123
Query: 221 SLSVSLSL 228
+ LSL
Sbjct: 124 IVLDKLSL 131
>gi|17987041|ref|NP_539675.1| 50S ribosomal protein L4 [Brucella melitensis bv. 1 str. 16M]
gi|17982697|gb|AAL51939.1| lsu ribosomal protein l1e (= l4p) [Brucella melitensis bv. 1 str.
16M]
Length = 201
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 79/117 (67%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG
Sbjct: 1 MDLTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
K ++QKGTGRARH + R PQFRGG HGP R+H L KKVR LGL+ ALSA+A
Sbjct: 61 SKMYKQKGTGRARHHSARAPQFRGGGQAHGPVVRNHDHDLPKKVRALGLRHALSAKA 117
>gi|163815976|ref|ZP_02207346.1| hypothetical protein COPEUT_02156 [Coprococcus eutactus ATCC 27759]
gi|158448786|gb|EDP25781.1| 50S ribosomal protein L4 [Coprococcus eutactus ATCC 27759]
Length = 206
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 76/109 (69%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VF V I + I+H+ V QLA +QGT S KT SEVSG G+KPWRQKGTG AR G+ R PQ
Sbjct: 23 VFGVEINEHIMHKAVVGQLANSRQGTQSAKTRSEVSGGGRKPWRQKGTGHARQGSTRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
+ GG + PKPR +++K+NKK ++L +K ALS++ AE K+ + L L
Sbjct: 83 WTGGGVVFAPKPRDYSVKMNKKEKQLAMKSALSSKVAENKLVVVDKLEL 131
>gi|49474403|ref|YP_032445.1| 50S ribosomal protein L4 [Bartonella quintana str. Toulouse]
gi|81646966|sp|Q6FZC3.1|RL4_BARQU RecName: Full=50S ribosomal protein L4
gi|49239907|emb|CAF26305.1| 50s ribosomal protein l4 [Bartonella quintana str. Toulouse]
Length = 206
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +F + R+DI+ RVVRWQLA+ QQGTH ++ S+VS T
Sbjct: 2 DLVIRTLD--GNEAGRLKVSESIFGLVPREDILQRVVRWQLARHQQGTHHSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KK+R LGL++ALSA+
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVVRSHAHDLPKKIRVLGLRLALSAK 116
>gi|90424936|ref|YP_533306.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris BisB18]
gi|109893630|sp|Q211E9.1|RL4_RHOPB RecName: Full=50S ribosomal protein L4
gi|90106950|gb|ABD88987.1| LSU ribosomal protein L4P [Rhodopseudomonas palustris BisB18]
Length = 206
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 84/130 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ ++F + R DII R V WQLAKRQ GTH K +EV TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDEIFGLDPRVDIIQRCVNWQLAKRQAGTHKAKGRAEVWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR L LK ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSQRVPQFRGGGRAFGPVVRSHAFDLPKKVRALALKHALSAKAKDG 120
Query: 219 KVSLSVSLSL 228
+ + S +L
Sbjct: 121 GLIVIESATL 130
>gi|85057801|ref|YP_456717.1| 50S ribosomal protein L4 [Aster yellows witches'-broom phytoplasma
AYWB]
gi|109893576|sp|Q2NIV5.1|RL4_AYWBP RecName: Full=50S ribosomal protein L4
gi|84789906|gb|ABC65638.1| LSU ribosomal protein L1E [Aster yellows witches'-broom phytoplasma
AYWB]
Length = 207
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 87/131 (66%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDKGFM---VLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N N+ + VLA VFD+ + +++ VV Q A +QGTH+TKT + V+G
Sbjct: 1 MPKINILNQQGDLVSEKVLATTVFDIKPNQQVLYDVVNAQRAAMRQGTHATKTRALVAGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRARHG++R P +RGG GP PR++++K+N+KVR L LK ALS +
Sbjct: 61 GKKPWRQKGTGRARHGSIRSPLWRGGGVTFGPSPRNYSVKVNQKVRILALKSALSLQVQN 120
Query: 218 GKVSLSVSLSL 228
++ + +++L
Sbjct: 121 NQLVVLDNINL 131
>gi|343526300|ref|ZP_08763250.1| 50S ribosomal protein L4 [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
gi|343394251|gb|EGV06799.1| 50S ribosomal protein L4 [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
Length = 207
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 79/120 (65%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIELNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG T+ GP PRS+A KL +KVRRL LK S + AE K SLS
Sbjct: 72 RARQGSIRSPQWRGGGTVFGPSPRSYAYKLPQKVRRLALKSVYSEKVAENKFVAVDSLSF 131
>gi|427391364|ref|ZP_18885770.1| 50S ribosomal protein L4 [Actinobaculum massiliae ACS-171-V-Col2]
gi|425732007|gb|EKU94819.1| 50S ribosomal protein L4 [Actinobaculum massiliae ACS-171-V-Col2]
Length = 215
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 81/123 (65%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
D I V +F + G L ++FDV + ++H+VV QLA +QGTH TKT EV G
Sbjct: 3 DKKIDVLDFSGKAAGTATLPAELFDVEVNVSLLHQVVNAQLAAARQGTHKTKTRGEVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKP+RQKGTGRAR G++R PQF GG T+HGP+PRS+A + KK+ L +LS RA
Sbjct: 63 GKKPFRQKGTGRARQGSIRAPQFTGGGTVHGPQPRSYAQRTPKKMIAAALLQSLSDRARG 122
Query: 218 GKV 220
G++
Sbjct: 123 GRI 125
>gi|403530689|ref|YP_006665218.1| 50S ribosomal protein L4 [Bartonella quintana RM-11]
gi|403232760|gb|AFR26503.1| 50S ribosomal protein L4 [Bartonella quintana RM-11]
Length = 206
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +F + R+DI+ RVVRWQLA+ QQGTH ++ S+VS T
Sbjct: 2 DLVIRTLD--GNEAGRLKVSESIFGLIPREDILQRVVRWQLARHQQGTHHSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KK+R LGL++ALSA+
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVVRSHAHDLPKKIRVLGLRLALSAK 116
>gi|269122980|ref|YP_003305557.1| 50S ribosomal protein L4 [Streptobacillus moniliformis DSM 12112]
gi|268314306|gb|ACZ00680.1| ribosomal protein L4/L1e [Streptobacillus moniliformis DSM 12112]
Length = 214
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 80/123 (65%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
D + V N E+KG ++ ++F + K ++H V+ +LA + GT STKT EVSG
Sbjct: 3 DFNLKVYNLNGEEKGVTTVSSEIFGLEPNKYVMHEVLTAELAASRAGTASTKTRGEVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KP+RQKGTGRAR G+ R P GG +HGPKPR++ K+NKKVR+L LK AL+ R
Sbjct: 63 GRKPFRQKGTGRARQGSTRAPHMVGGGVVHGPKPRNYDKKVNKKVRKLALKSALAVRIQN 122
Query: 218 GKV 220
G V
Sbjct: 123 GDV 125
>gi|383829116|ref|ZP_09984205.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
xinjiangensis XJ-54]
gi|383461769|gb|EID53859.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
xinjiangensis XJ-54]
Length = 226
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 81/125 (64%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E KG + L ++FDV ++H+VV QLA +QGTH TKT EV G G+KP+RQKGTG
Sbjct: 13 ESKGTVELPAEIFDVQANIPLMHQVVVAQLAAARQGTHDTKTRGEVRGGGRKPYRQKGTG 72
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQF GG T+HGP PR + + KK++ L+ ALS RA G+V + L
Sbjct: 73 RARQGSVRAPQFTGGGTVHGPTPRDYTQRTPKKMKAAALRGALSDRARAGQVHVITELVS 132
Query: 229 FLRPS 233
+PS
Sbjct: 133 AEKPS 137
>gi|403738730|ref|ZP_10951331.1| 50S ribosomal protein L4 [Austwickia chelonae NBRC 105200]
gi|403191380|dbj|GAB78101.1| 50S ribosomal protein L4 [Austwickia chelonae NBRC 105200]
Length = 218
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 80/120 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + N + G + L ++FDV +IH+VV QLA +QGTH+TKT EV G GKK
Sbjct: 4 IDILNAEGQKSGSIELPSELFDVQTNVPLIHQVVVAQLAAARQGTHATKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G+ R PQF GG T+HGP+PR +A + KK++ L+ ALS RA G++
Sbjct: 64 PYRQKGTGRARQGSTRAPQFAGGGTVHGPQPRDYAQRTPKKMKVAALRGALSDRARHGRI 123
>gi|284992873|ref|YP_003411427.1| 50S ribosomal protein L4/L1e [Geodermatophilus obscurus DSM 43160]
gi|284066118|gb|ADB77056.1| ribosomal protein L4/L1e [Geodermatophilus obscurus DSM 43160]
Length = 292
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 81/123 (65%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
D + V E G + L G++FD ++H+VV QLA +QGTH+TKT +VSG
Sbjct: 15 DRQVDVRTPAGETSGSVTLPGELFDASANVSLMHQVVVAQLAAARQGTHATKTRGQVSGG 74
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G KP+RQKGTGRAR G++R PQF GG T+HGP+PR ++ K KK++ L+ ALS RA E
Sbjct: 75 GIKPYRQKGTGRARQGSIRAPQFTGGGTVHGPQPRDYSQKTPKKMKAAALRGALSDRARE 134
Query: 218 GKV 220
+V
Sbjct: 135 NRV 137
>gi|289424792|ref|ZP_06426574.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
SK187]
gi|289154755|gb|EFD03438.1| ribosomal protein L4/L1 family protein [Propionibacterium acnes
SK187]
Length = 301
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 89/139 (64%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GD+FDV +IH+VV QLA +QGTH+TKT +V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
SG GKKPWRQKGTGRAR G+ R PQ+ GG T+HGP+PRS+A + KK+ L+ ALS
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQWVGGGTVHGPQPRSYAQRTPKKMVGAALRGALSDM 120
Query: 215 AAEGKVSLSVSLSLFLRPS 233
A + ++ + SL +PS
Sbjct: 121 ARDNRMFVVTSLVDGDKPS 139
>gi|373453139|ref|ZP_09545036.1| 50S ribosomal protein L4 [Eubacterium sp. 3_1_31]
gi|371964191|gb|EHO81726.1| 50S ribosomal protein L4 [Eubacterium sp. 3_1_31]
Length = 209
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 75/115 (65%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
+ LA VF + + I + Q A +QGTH TK +EV G G+KPWRQKGTGRAR G
Sbjct: 17 ITLADTVFGIEPNQQCIFDAIVMQRASMRQGTHDTKNRTEVRGGGRKPWRQKGTGRARQG 76
Query: 174 TLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
++R Q+RGG T+ GP PRS+A KLNKKVRRL LK LS + AE +S+ L L
Sbjct: 77 SIRATQWRGGGTVFGPTPRSYAYKLNKKVRRLALKSVLSEKVAENAMSVVDKLEL 131
>gi|330470172|ref|YP_004407915.1| 50S ribosomal protein L4 [Verrucosispora maris AB-18-032]
gi|328813143|gb|AEB47315.1| 50S ribosomal protein L4 [Verrucosispora maris AB-18-032]
Length = 216
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 86/138 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L GD+FDV ++H+VV QLA +QGTH TKT EVSG GKK
Sbjct: 4 VDVLNSEGTKTGSVELPGDIFDVQANVPLMHQVVVAQLAAARQGTHKTKTRGEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P++QKGTGRAR G++R PQF GG +HGP PR ++ + KK++ L+ ALS RA G+V
Sbjct: 64 PYKQKGTGRARQGSIRAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRGALSDRARAGQV 123
Query: 221 SLSVSLSLFLRPSFSLSL 238
+ + +PS +L
Sbjct: 124 HVVEAFVSGEKPSTKAAL 141
>gi|381164254|ref|ZP_09873484.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
azurea NA-128]
gi|379256159|gb|EHY90085.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
azurea NA-128]
Length = 228
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 82/125 (65%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E +G + L G++FDV ++H+VV Q+A +QGTH TKT EV G G+KP+RQKGTG
Sbjct: 13 EAQGTVELPGEIFDVQANIALMHQVVVAQMAAARQGTHDTKTRGEVRGGGRKPYRQKGTG 72
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQF GG T+HGP PR + + KK++ L+ ALS RA G+V + L
Sbjct: 73 RARQGSVRAPQFAGGGTVHGPTPRDYTQRTPKKMKAAALRGALSDRARAGQVHVITELVT 132
Query: 229 FLRPS 233
+PS
Sbjct: 133 GEKPS 137
>gi|260655382|ref|ZP_05860870.1| ribosomal protein L4/L1 family protein [Jonquetella anthropi E3_33
E1]
gi|424845194|ref|ZP_18269805.1| 50S ribosomal protein L4, bacterial/organelle [Jonquetella anthropi
DSM 22815]
gi|260629830|gb|EEX48024.1| ribosomal protein L4/L1 family protein [Jonquetella anthropi E3_33
E1]
gi|363986632|gb|EHM13462.1| 50S ribosomal protein L4, bacterial/organelle [Jonquetella anthropi
DSM 22815]
Length = 207
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 88/152 (57%), Gaps = 8/152 (5%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
VI + NF E G + L+ VF VP IH+VV Q A +QGT K EV G G+
Sbjct: 3 VIKILNFAGEVVGDLELSDAVFGVPFHSSAIHQVVVAQQANARQGTACAKDRGEVRGGGR 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
KPWRQK TGRAR G++R P + GG +HGPKPR + +K+NKKVR L ++ ALS RA E +
Sbjct: 63 KPWRQKHTGRARAGSIRSPLWAGGGVVHGPKPRDYFLKVNKKVRALAMRSALSVRAGESR 122
Query: 220 VSLSVSLSLFLRPSFSLSLKNTDTHVHIVSSI 251
LF FSL +T + ++++
Sbjct: 123 --------LFAVEGFSLEAPSTKKMLSFLAAV 146
>gi|339445914|ref|YP_004711918.1| hypothetical protein EGYY_24480 [Eggerthella sp. YY7918]
gi|338905666|dbj|BAK45517.1| hypothetical protein EGYY_24480 [Eggerthella sp. YY7918]
Length = 207
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 84/122 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + LA VF + ++H VVR Q A +QGTH TKT +VSG GKK
Sbjct: 4 IEIKDASGKKAGSVDLAPSVFGIEPNVPVMHTVVRSQRAAWRQGTHDTKTRGQVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR GT+R PQ+ GG T+ GP PRS+A ++NKK +L ++ ALSA+ A+G++
Sbjct: 64 PWRQKGTGRARQGTIRAPQWAGGGTVFGPHPRSYAFRVNKKEVKLAMRSALSAKLADGEL 123
Query: 221 SL 222
++
Sbjct: 124 TV 125
>gi|119383512|ref|YP_914568.1| 50S ribosomal protein L4 [Paracoccus denitrificans PD1222]
gi|166234698|sp|A1B028.1|RL4_PARDP RecName: Full=50S ribosomal protein L4
gi|119373279|gb|ABL68872.1| LSU ribosomal protein L4P [Paracoccus denitrificans PD1222]
Length = 206
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 81/117 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ D+F + R D++HRVVRWQ AK Q GTHS S+VS + KK +RQKGTG AR
Sbjct: 14 GDIDLSDDIFGLEPRADLLHRVVRWQRAKAQAGTHSVLGKSDVSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
HG+ + P FR G GP PRSHA L KKVR LGLK ALSA+AA G++ + SL++
Sbjct: 74 HGSRKAPIFRHGGVYKGPTPRSHAFDLPKKVRALGLKHALSAKAAAGELVVVDSLNI 130
>gi|167759861|ref|ZP_02431988.1| hypothetical protein CLOSCI_02224 [Clostridium scindens ATCC 35704]
gi|336421094|ref|ZP_08601254.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 5_1_57FAA]
gi|167662480|gb|EDS06610.1| 50S ribosomal protein L4 [Clostridium scindens ATCC 35704]
gi|336002453|gb|EGN32562.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 5_1_57FAA]
Length = 206
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 86/144 (59%), Gaps = 2/144 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L+ VF V I + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGTMDLSDAVFGVEINEHLLHMAVVNQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK- 219
PWRQKGTG AR G+ R PQ+ GG + P PR ++ K+NKK +R LK AL+A+ E K
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPVPRDYSFKMNKKEKRAALKSALTAKVEEKKF 123
Query: 220 -VSLSVSLSLFLRPSFSLSLKNTD 242
V + L +F+ LKN D
Sbjct: 124 IVVDEIKLDEIKTKNFANILKNLD 147
>gi|265984290|ref|ZP_06097025.1| ribosomal protein L4 [Brucella sp. 83/13]
gi|306838042|ref|ZP_07470900.1| 50S ribosomal protein L4 [Brucella sp. NF 2653]
gi|264662882|gb|EEZ33143.1| ribosomal protein L4 [Brucella sp. 83/13]
gi|306406966|gb|EFM63187.1| 50S ribosomal protein L4 [Brucella sp. NF 2653]
Length = 206
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 77/115 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLAHRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
++QKGTGRARH + R PQFRGG HGP R+H L KKVR LGL+ ALSA+A
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGQAHGPVVRNHDHDLPKKVRALGLRHALSAKA 117
>gi|443489527|ref|YP_007367674.1| 50S ribosomal protein L4, RplD [Mycobacterium liflandii 128FXT]
gi|442582024|gb|AGC61167.1| 50S ribosomal protein L4, RplD [Mycobacterium liflandii 128FXT]
Length = 224
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 85/138 (61%)
Query: 96 HQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVS 155
+DL I V + G +VL ++FDVP ++H+VV Q A +QGTHSTKT +VS
Sbjct: 9 QKDLEIQVKAPDGKVDGSVVLPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGDVS 68
Query: 156 GTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
G G+KP+RQKGTGRAR G+ R PQF GG +HGPKPR ++ + KK+ L+ ALS RA
Sbjct: 69 GGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRA 128
Query: 216 AEGKVSLSVSLSLFLRPS 233
G++ L PS
Sbjct: 129 RNGRIHAVTELVAGQTPS 146
>gi|289579144|ref|YP_003477771.1| 50S ribosomal protein L4/L1e [Thermoanaerobacter italicus Ab9]
gi|297545328|ref|YP_003677630.1| 50S ribosomal protein L4/L1e [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289528857|gb|ADD03209.1| ribosomal protein L4/L1e [Thermoanaerobacter italicus Ab9]
gi|296843103|gb|ADH61619.1| ribosomal protein L4/L1e [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 206
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 80/120 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L VF VP+ ++H+ V LA ++QGTHSTKT EV G G+K
Sbjct: 4 VAVYNVKGEQVGEIELKDSVFGVPVNVPVMHQAVLNYLANQRQGTHSTKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+ G + GPKPR ++ KL KKV+RL LK ALS++ + ++
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIKGGVVFGPKPRDYSYKLPKKVKRLALKSALSSKVRDNEI 123
>gi|269219005|ref|ZP_06162859.1| ribosomal protein L4/L1 family protein [Actinomyces sp. oral taxon
848 str. F0332]
gi|269212116|gb|EEZ78456.1| ribosomal protein L4/L1 family protein [Actinomyces sp. oral taxon
848 str. F0332]
Length = 215
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 89/144 (61%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ Q L V + + G L ++FDV + +IH+VV QLA +QGTHSTKT EV
Sbjct: 1 MTQSLNADVYDVTGKVTGSFELPAELFDVEVNIPLIHQVVNAQLAAARQGTHSTKTRGEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
SG GKKP++QKGTGRAR G++R PQF GG T+HGPKPR ++ + KK+ L +LS R
Sbjct: 61 SGGGKKPFKQKGTGRARQGSIRAPQFTGGGTVHGPKPRDYSQRTPKKMIAAALCQSLSDR 120
Query: 215 AAEGKVSLSVSLSLFLRPSFSLSL 238
A G++ + + +PS +L
Sbjct: 121 ARNGRIHVVEAFLEGEKPSTKAAL 144
>gi|255282606|ref|ZP_05347161.1| ribosomal protein L4/L1 family protein [Bryantella formatexigens
DSM 14469]
gi|255266899|gb|EET60104.1| 50S ribosomal protein L4 [Marvinbryantia formatexigens DSM 14469]
Length = 206
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L+ VF V I + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGTMELSDAVFGVEINEHLVHMAVLSQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ++GG + P PR ++ K+NKK +R LK AL++R E K+
Sbjct: 64 PWRQKGTGHARQGSTRAPQWKGGGVVFAPVPRDYSFKMNKKEKRAALKSALTSRVQENKL 123
Query: 221 SL--SVSLSLFLRPSFSLSLKNTDTHVHIV 248
+ + L S LKN + +V
Sbjct: 124 VVLDELKLDAIKTKSMVNVLKNVNAEKALV 153
>gi|296130494|ref|YP_003637744.1| 50S ribosomal protein L4 [Cellulomonas flavigena DSM 20109]
gi|296022309|gb|ADG75545.1| ribosomal protein L4/L1e [Cellulomonas flavigena DSM 20109]
Length = 228
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 86/145 (59%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + + G L GDVFDV +IH+VV QLA +QGTH TKT EV G G
Sbjct: 5 LTVDVLDEKGKKAGTADLPGDVFDVTTNVPLIHQVVVAQLAAVRQGTHDTKTRGEVRGGG 64
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP++QKGTGRAR G+ R PQF GG T+HGP PR ++ + KK++ L+ ALS RA G
Sbjct: 65 KKPYKQKGTGRARQGSTRAPQFAGGGTVHGPTPRDYSQRTPKKMKAAALRGALSDRARAG 124
Query: 219 KVSLSVSLSLFLRPSFSLSLKNTDT 243
+V + + PS +L D
Sbjct: 125 RVHVVTGFAPGEVPSTKAALAVLDN 149
>gi|160947699|ref|ZP_02094866.1| hypothetical protein PEPMIC_01634 [Parvimonas micra ATCC 33270]
gi|158446833|gb|EDP23828.1| 50S ribosomal protein L4 [Parvimonas micra ATCC 33270]
Length = 207
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 87/131 (66%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N +N E G + L +F + + + +++ VV+ LA R+QGT S KT +EV G
Sbjct: 1 MPKVNVYNQLGEVVGDIELNEAIFGIEVNEHVVYEVVKNHLANRRQGTQSAKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ++GG + PKPRS+ + KKVRRL +K LS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQWKGGGVVFAPKPRSYRYSVPKKVRRLAMKSVLSSKVLE 120
Query: 218 GKVSLSVSLSL 228
G++ + +L++
Sbjct: 121 GELRILDALTI 131
>gi|218885188|ref|YP_002434509.1| 50S ribosomal protein L4 [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|226730654|sp|B8DN97.1|RL4_DESVM RecName: Full=50S ribosomal protein L4
gi|218756142|gb|ACL07041.1| ribosomal protein L4/L1e [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 206
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 83/117 (70%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ V + ++ G + LA +VF+V ++ +I++ VVR A + GTH+TKT + VSG G
Sbjct: 3 VVKVYDQNKKEAGELTLAPEVFEVEVKPEILNLVVRAHRAGLRSGTHATKTRAFVSGGGA 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
KPWRQKGTGRAR G+ R P +RGG + GP+PR + K+NKKVR+L LK+ALS+R A
Sbjct: 63 KPWRQKGTGRARSGSNRSPIWRGGAVIFGPQPREYGFKVNKKVRQLALKMALSSRLA 119
>gi|347543074|ref|YP_004857712.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346986111|dbj|BAK81786.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 208
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 78/117 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L +VFDV I+K +H+VV QLA ++QGTHS KT SEVSG GKK
Sbjct: 4 VEVYNICGEKVGELELLKEVFDVEIKKYAVHQVVVAQLANKRQGTHSAKTRSEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
PWRQKGTGRAR G++R PQ+ G + PKPR + + ++K +RR + L+++ E
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIHGGVVFAPKPRDYRMSISKTLRRAAITSVLTSKLKE 120
>gi|402849274|ref|ZP_10897514.1| LSU ribosomal protein L4p (L1e) [Rhodovulum sp. PH10]
gi|402500587|gb|EJW12259.1| LSU ribosomal protein L4p (L1e) [Rhodovulum sp. PH10]
Length = 206
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 81/122 (66%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V E G + L ++F + R D+I R + WQL++RQ+GTH+ K +E+ TG
Sbjct: 1 MQLDVKTLEGEAAGSIDLDQEIFGLEPRADLIQRCIVWQLSRRQRGTHAVKNRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP+ RSHAI L KKVR L L+ ALSA+A +G
Sbjct: 61 KKMYKQKGTGSARHGSARAPQFRGGGRAFGPQVRSHAIDLPKKVRALALRHALSAKAKDG 120
Query: 219 KV 220
+
Sbjct: 121 GI 122
>gi|289449461|ref|YP_003475783.1| 50S ribosomal protein L4 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184008|gb|ADC90433.1| 50S ribosomal protein L4 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 207
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 76/106 (71%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + + ++H+VV+ QLA R+QGT STKT SEVSG GK+PWRQKGTGRAR
Sbjct: 15 GQIELSDAVFGIEPNQSVMHQVVKNQLANRRQGTGSTKTRSEVSGGGKRPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
HG+ R Q+ GG + GPKPR + ++KKVRRL +K ALS + E
Sbjct: 75 HGSTRSAQYVGGGIIFGPKPRDYHYTVSKKVRRLAIKSALSTKLQE 120
>gi|154505168|ref|ZP_02041906.1| hypothetical protein RUMGNA_02681 [Ruminococcus gnavus ATCC 29149]
gi|336433163|ref|ZP_08612989.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 2_1_58FAA]
gi|153794647|gb|EDN77067.1| 50S ribosomal protein L4 [Ruminococcus gnavus ATCC 29149]
gi|336017125|gb|EGN46893.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 2_1_58FAA]
Length = 206
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 78/119 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L+ VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGTIDLSDAVFGVEVNEHLVHMAVVSQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PR +++KLNKK +R LK ALS+R AE K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYSMKLNKKEKRAALKSALSSRVAENK 122
>gi|317050529|ref|YP_004111645.1| 50S ribosomal protein L4/L1e [Desulfurispirillum indicum S5]
gi|316945613|gb|ADU65089.1| ribosomal protein L4/L1e [Desulfurispirillum indicum S5]
Length = 207
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 78/118 (66%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ V N NE G + L+ ++F ++ ++H VV QLA R+QGTH+ K S VSG G
Sbjct: 3 VVSVINVNNEKVGEVALSDELFGGAVKPHLMHEVVVAQLAARRQGTHAVKNRSAVSGGGS 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
KPWRQKGTGRAR GT R P +R G + GP PRS+ K+NKKVRR L ALS +AA+
Sbjct: 63 KPWRQKGTGRARAGTSRSPLWRTGGVIFGPTPRSYEKKVNKKVRRQALVSALSEKAAQ 120
>gi|333918148|ref|YP_004491729.1| 50S ribosomal protein L4 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480369|gb|AEF38929.1| 50S ribosomal protein L4 [Amycolicicoccus subflavus DQS3-9A1]
Length = 232
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 81/123 (65%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L ++FD P+ ++H+VV QLA +QGTHSTKT +EVSG GKKP+RQKGTGRA
Sbjct: 25 NGTVDLPAEIFDAPVNVALMHQVVVAQLAAARQGTHSTKTRAEVSGGGKKPYRQKGTGRA 84
Query: 171 RHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFL 230
R G+ R PQF GG T+HGPKPR ++ + KK+ L+ ALS RA ++ + +
Sbjct: 85 RQGSTRAPQFVGGGTVHGPKPRDYSQRTPKKMIAGALRSALSDRARSERIHVITEVVAGQ 144
Query: 231 RPS 233
PS
Sbjct: 145 EPS 147
>gi|283796558|ref|ZP_06345711.1| ribosomal protein L4/L1 family protein [Clostridium sp. M62/1]
gi|291075972|gb|EFE13336.1| 50S ribosomal protein L4 [Clostridium sp. M62/1]
gi|295092548|emb|CBK78655.1| LSU ribosomal protein L4P [Clostridium cf. saccharolyticum K10]
Length = 204
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 84/142 (59%), Gaps = 2/142 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGNEVGTLELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK- 219
PWRQKGTG AR G+ R PQ+ GG + P PR + I+LNKK +RL LK AL++R E K
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPTPRDYTIRLNKKEKRLALKSALTSRVNENKF 123
Query: 220 -VSLSVSLSLFLRPSFSLSLKN 240
V +S + F+ LKN
Sbjct: 124 IVVDELSFAEIKTKKFAEVLKN 145
>gi|326773964|ref|ZP_08233246.1| ribosomal protein L4/L1 family protein [Actinomyces viscosus C505]
gi|326636103|gb|EGE37007.1| ribosomal protein L4/L1 family protein [Actinomyces viscosus C505]
Length = 214
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 89/144 (61%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ + L + V + + G + L +VFD P+ ++H+VV QLA +QGTH+TKT +V
Sbjct: 1 MTEALTVDVVDSAGKKTGSVELPAEVFDAPLNIPLMHQVVVGQLAAARQGTHATKTRGDV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G G+KP+RQKGTGRAR G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS R
Sbjct: 61 RGGGRKPYRQKGTGRARQGSTRAPQFVGGGTVHGPQPRDYSQRTPKKMKAAALRSALSDR 120
Query: 215 AAEGKVSLSVSLSLFLRPSFSLSL 238
A G+V + PS +L
Sbjct: 121 ARNGRVHVITEFVTTTVPSTKNAL 144
>gi|108797987|ref|YP_638184.1| 50S ribosomal protein L4 [Mycobacterium sp. MCS]
gi|119867083|ref|YP_937035.1| 50S ribosomal protein L4 [Mycobacterium sp. KMS]
gi|126433649|ref|YP_001069340.1| 50S ribosomal protein L4 [Mycobacterium sp. JLS]
gi|122977349|sp|Q1BDA6.1|RL4_MYCSS RecName: Full=50S ribosomal protein L4
gi|166234689|sp|A3PVC2.1|RL4_MYCSJ RecName: Full=50S ribosomal protein L4
gi|166234690|sp|A1UBN7.1|RL4_MYCSK RecName: Full=50S ribosomal protein L4
gi|108768406|gb|ABG07128.1| LSU ribosomal protein L4P [Mycobacterium sp. MCS]
gi|119693172|gb|ABL90245.1| LSU ribosomal protein L4P [Mycobacterium sp. KMS]
gi|126233449|gb|ABN96849.1| LSU ribosomal protein L4P [Mycobacterium sp. JLS]
Length = 219
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 80/122 (65%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA ++QGTHSTKT EVSG GKKP+RQKGTGRAR
Sbjct: 16 GSVELPAELFDVEANIALMHQVVTAQLAAKRQGTHSTKTRGEVSGGGKKPYRQKGTGRAR 75
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG T+HGP+PR ++ + KK+ L+ ALS RA G++ L
Sbjct: 76 QGSTRAPQFTGGGTVHGPQPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVEGQT 135
Query: 232 PS 233
PS
Sbjct: 136 PS 137
>gi|167036802|ref|YP_001664380.1| 50S ribosomal protein L4 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167039521|ref|YP_001662506.1| 50S ribosomal protein L4 [Thermoanaerobacter sp. X514]
gi|256752633|ref|ZP_05493485.1| ribosomal protein L4/L1e [Thermoanaerobacter ethanolicus CCSD1]
gi|300915228|ref|ZP_07132543.1| ribosomal protein L4/L1e [Thermoanaerobacter sp. X561]
gi|307725152|ref|YP_003904903.1| 50S ribosomal protein L4/L1e [Thermoanaerobacter sp. X513]
gi|320115224|ref|YP_004185383.1| 50S ribosomal protein L4/L1e [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|326390660|ref|ZP_08212215.1| ribosomal protein L4/L1e [Thermoanaerobacter ethanolicus JW 200]
gi|345018533|ref|YP_004820886.1| 50S ribosomal protein L4 [Thermoanaerobacter wiegelii Rt8.B1]
gi|392939575|ref|ZP_10305219.1| 50S ribosomal protein L4, bacterial/organelle [Thermoanaerobacter
siderophilus SR4]
gi|226731436|sp|B0KCK1.1|RL4_THEP3 RecName: Full=50S ribosomal protein L4
gi|226731437|sp|B0K5P4.1|RL4_THEPX RecName: Full=50S ribosomal protein L4
gi|166853761|gb|ABY92170.1| ribosomal protein L4/L1e [Thermoanaerobacter sp. X514]
gi|166855636|gb|ABY94044.1| ribosomal protein L4/L1e [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256748453|gb|EEU61505.1| ribosomal protein L4/L1e [Thermoanaerobacter ethanolicus CCSD1]
gi|300888952|gb|EFK84099.1| ribosomal protein L4/L1e [Thermoanaerobacter sp. X561]
gi|307582213|gb|ADN55612.1| ribosomal protein L4/L1e [Thermoanaerobacter sp. X513]
gi|319928315|gb|ADV79000.1| ribosomal protein L4/L1e [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325993338|gb|EGD51775.1| ribosomal protein L4/L1e [Thermoanaerobacter ethanolicus JW 200]
gi|344033876|gb|AEM79602.1| ribosomal protein L4/L1e [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291325|gb|EIV99768.1| 50S ribosomal protein L4, bacterial/organelle [Thermoanaerobacter
siderophilus SR4]
Length = 206
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 79/120 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L VF VP+ ++H V LA ++QGTHSTKT EV G G+K
Sbjct: 4 VAVYNVKGEQVGEIELKDSVFGVPVNVPVMHEAVLNYLANQRQGTHSTKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+ G + GPKPR ++ KL KKV+RL LK ALS++ + ++
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIKGGIVFGPKPRDYSYKLPKKVKRLALKSALSSKVRDNEI 123
>gi|365157325|ref|ZP_09353599.1| 50S ribosomal protein L4 [Bacillus smithii 7_3_47FAA]
gi|363625471|gb|EHL76510.1| 50S ribosomal protein L4 [Bacillus smithii 7_3_47FAA]
Length = 207
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 94/156 (60%), Gaps = 7/156 (4%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + L +F + + ++H V Q A +QGTH K SEVSG
Sbjct: 1 MPKVALYNQSGTKVGDIELNDSIFGITPNEHVLHEAVVMQRASLRQGTHKVKNRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQWRGGGTVFGPTPRSYSYKLPKKVRRLAIKSALSSKVNE 120
Query: 218 GKVSLSVSLSLFL--RPSFSLSLKN--TDTHVHIVS 249
+ + +L+ + F+ LKN DT +V+
Sbjct: 121 NNIVVVDTLNFDVPKTKEFTKVLKNLSVDTKALVVT 156
>gi|227876214|ref|ZP_03994330.1| ribosomal protein L4 [Mobiluncus mulieris ATCC 35243]
gi|269976880|ref|ZP_06183854.1| ribosomal protein L4/L1 family [Mobiluncus mulieris 28-1]
gi|306819490|ref|ZP_07453197.1| ribosomal protein L4/L1 family protein [Mobiluncus mulieris ATCC
35239]
gi|307701215|ref|ZP_07638237.1| 50S ribosomal protein L4 [Mobiluncus mulieris FB024-16]
gi|227843175|gb|EEJ53368.1| ribosomal protein L4 [Mobiluncus mulieris ATCC 35243]
gi|269934711|gb|EEZ91271.1| ribosomal protein L4/L1 family [Mobiluncus mulieris 28-1]
gi|304647782|gb|EFM45100.1| ribosomal protein L4/L1 family protein [Mobiluncus mulieris ATCC
35239]
gi|307613609|gb|EFN92856.1| 50S ribosomal protein L4 [Mobiluncus mulieris FB024-16]
Length = 214
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 85/133 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + + G + L G+VFD+ + ++H+VV QLA +QGTH+TKT +VSG GKK
Sbjct: 7 IDVLDGAGKKTGTVELPGEVFDLELNVPLLHQVVNAQLAAARQGTHATKTRGDVSGGGKK 66
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G++R PQF GG +HGP+PR + K KK++ L+ ALS RA +V
Sbjct: 67 PYRQKGTGRARQGSIRAPQFTGGGIVHGPQPRDYTQKTPKKMKAAALRQALSDRARANRV 126
Query: 221 SLSVSLSLFLRPS 233
+ + PS
Sbjct: 127 HVLSDFGVKDAPS 139
>gi|256390141|ref|YP_003111705.1| 50S ribosomal protein L4 [Catenulispora acidiphila DSM 44928]
gi|256356367|gb|ACU69864.1| ribosomal protein L4/L1e [Catenulispora acidiphila DSM 44928]
Length = 217
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 74/105 (70%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L G++FDV +IH+VV QLA +QGTH TKT EVSG GKKP+RQKGTGRAR G+
Sbjct: 9 LPGEIFDVQTNIPLIHQVVVAQLAAARQGTHKTKTRGEVSGGGKKPYRQKGTGRARQGST 68
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
R PQF GG +HGP PR +A + KK++ L+ ALS RA +G+V
Sbjct: 69 RAPQFAGGGVVHGPVPRDYAQRTPKKMKAAALRGALSDRARDGRV 113
>gi|319405897|emb|CBI79529.1| 50S ribosomal protein L4 [Bartonella sp. AR 15-3]
Length = 206
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 83/117 (70%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLV+ + ++ G + ++ ++F + R+DI+ RV+RWQLA+RQ+GTH ++ S+VS T
Sbjct: 2 DLVVKTLD--GKEAGKLKVSENIFGLTPREDILQRVIRWQLARRQKGTHPSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP R HA L KKVR LGL++ALS +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVMRCHAHSLPKKVRALGLRLALSVK 116
>gi|295109478|emb|CBL23431.1| LSU ribosomal protein L4P [Ruminococcus obeum A2-162]
Length = 206
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 80/128 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G M L VF V I + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VTVYNMEGNEVGTMELNDAVFGVEINEHLVHLAVVRQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G++R PQ+ GG + P PR + +K+NKK RR LK AL+++ + K+
Sbjct: 64 PWRQKGTGHARQGSIRAPQWTGGGVVFAPVPRDYEVKMNKKERRAALKSALTSKVQDNKL 123
Query: 221 SLSVSLSL 228
+ SL+L
Sbjct: 124 VVVDSLAL 131
>gi|118616572|ref|YP_904904.1| 50S ribosomal protein L4 [Mycobacterium ulcerans Agy99]
gi|166234692|sp|A0PM64.1|RL4_MYCUA RecName: Full=50S ribosomal protein L4
gi|118568682|gb|ABL03433.1| 50S ribosomal protein L4, RplD [Mycobacterium ulcerans Agy99]
Length = 224
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 85/138 (61%)
Query: 96 HQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVS 155
+DL I V + G +VL ++FDVP ++H+VV Q A +QGTHSTKT +VS
Sbjct: 9 QKDLEIQVKAPDGKVDGSVVLPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGDVS 68
Query: 156 GTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
G G+KP+RQKGTGRAR G+ R PQF GG +HGPKPR ++ + KK+ L+ ALS RA
Sbjct: 69 GGGRKPYRQKGTGRARQGSTRTPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRA 128
Query: 216 AEGKVSLSVSLSLFLRPS 233
G++ L PS
Sbjct: 129 RNGRIHAVTELVAGQTPS 146
>gi|132978|sp|P28601.1|RL4_BACST RecName: Full=50S ribosomal protein L4; Short=BL4
gi|40103|emb|CAA47403.1| ribosomal protein L4 [Geobacillus stearothermophilus]
Length = 207
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + K ++ V Q A +QGTH TK +EVSG
Sbjct: 1 MPKVALYNQNGQTVGEIELNDAVFGIEPNKHVLFEAVIMQRASMRQGTHKTKNRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLE 120
Query: 218 GKVSLSVSLSL 228
+ + LSL
Sbjct: 121 NDIVVLDQLSL 131
>gi|399525030|ref|ZP_10765509.1| 50S ribosomal protein L4 [Atopobium sp. ICM58]
gi|398373562|gb|EJN51478.1| 50S ribosomal protein L4 [Atopobium sp. ICM58]
Length = 216
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 90/144 (62%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ D + V + + G +VL G +FDVP ++H+VV QLA +QGTH+TKT EV
Sbjct: 3 MADDRNVDVIDLEGKKAGSVVLPGSIFDVPTNIPLMHQVVVAQLAAARQGTHATKTRGEV 62
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+G GKKP+RQKGTG AR G++R P F GG +HGP+PR + + KK+++ L+ ALS R
Sbjct: 63 AGGGKKPFRQKGTGNARQGSIRAPHFTGGGIVHGPQPRDYDQRTPKKMKQGALRSALSDR 122
Query: 215 AAEGKVSLSVSLSLFLRPSFSLSL 238
A ++ + +L +PS +L
Sbjct: 123 ARADRIHVVTALFEGDKPSTKAAL 146
>gi|365827619|ref|ZP_09369470.1| 50S ribosomal protein L4/L1 [Actinomyces sp. oral taxon 849 str.
F0330]
gi|400294445|ref|ZP_10796230.1| 50S ribosomal protein L4 [Actinomyces naeslundii str. Howell 279]
gi|365264888|gb|EHM94674.1| 50S ribosomal protein L4/L1 [Actinomyces sp. oral taxon 849 str.
F0330]
gi|399900448|gb|EJN83418.1| 50S ribosomal protein L4 [Actinomyces naeslundii str. Howell 279]
Length = 214
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 88/144 (61%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ + L + V + + G + L +VFD P+ ++H+VV QLA +QGTH+TKT +V
Sbjct: 1 MTEALTVDVVDSAGKKTGSVELPAEVFDAPLNIPLMHQVVVGQLAAARQGTHATKTRGDV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G G+KP+RQKGTGRAR G+ R PQF GG T+HGP+PR + + KK++ L+ ALS R
Sbjct: 61 RGGGRKPYRQKGTGRARQGSTRAPQFVGGGTVHGPQPRDYTQRTPKKMKAAALRSALSDR 120
Query: 215 AAEGKVSLSVSLSLFLRPSFSLSL 238
A G+V + PS +L
Sbjct: 121 ARNGRVHVITEFVTTAVPSTKNAL 144
>gi|329945685|ref|ZP_08293415.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 170 str.
F0386]
gi|343521953|ref|ZP_08758919.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 175 str.
F0384]
gi|328528493|gb|EGF55467.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 170 str.
F0386]
gi|343401362|gb|EGV13868.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 175 str.
F0384]
Length = 214
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 88/144 (61%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ + L + V + + G + L +VFD P+ ++H+VV QLA +QGTH+TKT +V
Sbjct: 1 MTEALTVDVVDSAGKKTGSVELPAEVFDAPLNIPLMHQVVVGQLAAARQGTHATKTRGDV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G G+KP+RQKGTGRAR G+ R PQF GG T+HGP+PR + + KK++ L+ ALS R
Sbjct: 61 RGGGRKPYRQKGTGRARQGSTRAPQFVGGGTVHGPQPRDYTQRTPKKMKAAALRSALSDR 120
Query: 215 AAEGKVSLSVSLSLFLRPSFSLSL 238
A G+V + PS +L
Sbjct: 121 ARNGRVHVITEFVTTTVPSTKNAL 144
>gi|335047491|ref|ZP_08540512.1| 50S ribosomal protein L4 [Parvimonas sp. oral taxon 110 str. F0139]
gi|333761299|gb|EGL38854.1| 50S ribosomal protein L4 [Parvimonas sp. oral taxon 110 str. F0139]
Length = 207
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 87/131 (66%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N +N E G + L +F V + + +++ VV+ LA R+QGT S KT +EV G
Sbjct: 1 MPKVNVYNQLGEVVGDIELNEAIFGVEVNEHVVYEVVKNHLANRRQGTQSAKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ++GG + PKPRS+ + KKVRRL ++ LS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQWKGGGVVFAPKPRSYRYSVPKKVRRLAMRSVLSSKVLE 120
Query: 218 GKVSLSVSLSL 228
G++ + +L++
Sbjct: 121 GELRILDALTV 131
>gi|257064319|ref|YP_003143991.1| 50S ribosomal protein L4 [Slackia heliotrinireducens DSM 20476]
gi|256791972|gb|ACV22642.1| ribosomal protein L4 [Slackia heliotrinireducens DSM 20476]
Length = 207
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 79/120 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + N E + L VF + ++H VVR Q A +QGTH TKT EV G GKK
Sbjct: 4 IEIKNASGEKASEVELESAVFGIEPNVHVMHTVVRSQQAAMRQGTHDTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR GT+R PQ+ GG T+ GP PRS+A ++N+K +L ++ ALSA+ A+G++
Sbjct: 64 PWRQKGTGRARQGTIRAPQWAGGGTVFGPHPRSYAFRVNRKEVKLAMRSALSAKLADGQL 123
>gi|350567991|ref|ZP_08936397.1| 50S ribosomal protein L4 [Propionibacterium avidum ATCC 25577]
gi|348662243|gb|EGY78912.1| 50S ribosomal protein L4 [Propionibacterium avidum ATCC 25577]
Length = 301
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 87/139 (62%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+++ I V + + G L GDVFD +IH+VV QLA +QGTH+TKT V
Sbjct: 1 MNETKTIDVLDVKGKKAGSAELPGDVFDANTNIPLIHQVVIAQLAAARQGTHATKTRGLV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
SG GKKPWRQKGTGRAR G+ R PQ+ GG T+HGP+PRS+A + KK+ L+ ALS
Sbjct: 61 SGGGKKPWRQKGTGRARQGSTRAPQWVGGGTVHGPQPRSYAQRTPKKMVAAALRGALSDM 120
Query: 215 AAEGKVSLSVSLSLFLRPS 233
A + ++ + SL +PS
Sbjct: 121 ARDNRIFVVTSLVDGDKPS 139
>gi|125975385|ref|YP_001039295.1| 50S ribosomal protein L4 [Clostridium thermocellum ATCC 27405]
gi|256005328|ref|ZP_05430294.1| ribosomal protein L4/L1e [Clostridium thermocellum DSM 2360]
gi|281419347|ref|ZP_06250362.1| ribosomal protein L4/L1e [Clostridium thermocellum JW20]
gi|385777821|ref|YP_005686986.1| 50S ribosomal protein L4 [Clostridium thermocellum DSM 1313]
gi|419723227|ref|ZP_14250360.1| ribosomal protein L4/L1e [Clostridium thermocellum AD2]
gi|419727128|ref|ZP_14254134.1| ribosomal protein L4/L1e [Clostridium thermocellum YS]
gi|166234659|sp|A3DJH3.1|RL4_CLOTH RecName: Full=50S ribosomal protein L4
gi|125715610|gb|ABN54102.1| ribosomal protein L4/L1e [Clostridium thermocellum ATCC 27405]
gi|255990764|gb|EEU00880.1| ribosomal protein L4/L1e [Clostridium thermocellum DSM 2360]
gi|281406967|gb|EFB37230.1| ribosomal protein L4/L1e [Clostridium thermocellum JW20]
gi|316939501|gb|ADU73535.1| ribosomal protein L4/L1e [Clostridium thermocellum DSM 1313]
gi|380769533|gb|EIC03447.1| ribosomal protein L4/L1e [Clostridium thermocellum YS]
gi|380780692|gb|EIC10357.1| ribosomal protein L4/L1e [Clostridium thermocellum AD2]
Length = 208
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 80/117 (68%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+F + + K IH+V+ QLA R+QGT STKT SEV G G+KPWRQKGTGRAR
Sbjct: 15 GEINLRDDIFGIEVNKHAIHQVIVNQLANRRQGTQSTKTKSEVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
HG++R Q+ G GPKPRS+ + KK+RRL LK ALS++ E ++ + SL+
Sbjct: 75 HGSIRSAQWVKGGIALGPKPRSYKYAVPKKLRRLALKSALSSKVNENELLVLDSLNF 131
>gi|56418642|ref|YP_145960.1| 50S ribosomal protein L4 [Geobacillus kaustophilus HTA426]
gi|261417608|ref|YP_003251290.1| 50S ribosomal protein L4 [Geobacillus sp. Y412MC61]
gi|297528483|ref|YP_003669758.1| ribosomal protein L4/L1e [Geobacillus sp. C56-T3]
gi|319765266|ref|YP_004130767.1| 50S ribosomal protein L4 [Geobacillus sp. Y412MC52]
gi|375006921|ref|YP_004980551.1| 50S ribosomal protein L4 [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448236416|ref|YP_007400474.1| 50S ribosomal protein L4 [Geobacillus sp. GHH01]
gi|81558135|sp|Q5L3Z6.1|RL4_GEOKA RecName: Full=50S ribosomal protein L4
gi|56378484|dbj|BAD74392.1| 50S ribosomal protein L4 [Geobacillus kaustophilus HTA426]
gi|261374065|gb|ACX76808.1| ribosomal protein L4/L1e [Geobacillus sp. Y412MC61]
gi|297251735|gb|ADI25181.1| ribosomal protein L4/L1e [Geobacillus sp. C56-T3]
gi|317110132|gb|ADU92624.1| ribosomal protein L4/L1e [Geobacillus sp. Y412MC52]
gi|359285767|gb|AEV17451.1| 50S ribosomal protein L4 [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445205258|gb|AGE20723.1| 50S ribosomal protein L4 [Geobacillus sp. GHH01]
Length = 207
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + K ++ V Q A +QGTH TK +EVSG
Sbjct: 1 MPKVALYNQNGQTVGEIELNDAVFGIEPNKHVLFEAVIMQRASMRQGTHKTKNRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLE 120
Query: 218 GKVSLSVSLSL 228
+ + LSL
Sbjct: 121 NDIVVLDQLSL 131
>gi|340359378|ref|ZP_08681864.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 448 str.
F0400]
gi|339884699|gb|EGQ74467.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 448 str.
F0400]
Length = 214
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 88/140 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + + + E G L ++FDV ++H+VV QLA +QGTH+T+T V G G
Sbjct: 5 LSVAIVDSKGERTGTAELPAEIFDVEPNIPLMHQVVVAQLAAARQGTHATRTRGMVRGGG 64
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KP+RQKGTGRAR G++R PQF GG T+HGP+PR++A + KK++ L+ ALS RA G
Sbjct: 65 RKPYRQKGTGRARQGSIRAPQFAGGGTVHGPQPRNYAQRTPKKMKVAALRSALSDRARNG 124
Query: 219 KVSLSVSLSLFLRPSFSLSL 238
+V + + RPS +L
Sbjct: 125 RVHVITEFLVADRPSTKQAL 144
>gi|183981054|ref|YP_001849345.1| 50S ribosomal protein L4 [Mycobacterium marinum M]
gi|226730696|sp|B2HSN2.1|RL4_MYCMM RecName: Full=50S ribosomal protein L4
gi|183174380|gb|ACC39490.1| 50S ribosomal protein L4, RplD [Mycobacterium marinum M]
Length = 224
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 84/138 (60%)
Query: 96 HQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVS 155
+DL I V + G + L ++FDVP ++H+VV Q A +QGTHSTKT +VS
Sbjct: 9 QKDLEIQVKTPDGKVDGSVALPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGDVS 68
Query: 156 GTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
G G+KP+RQKGTGRAR G+ R PQF GG +HGPKPR ++ + KK+ L+ ALS RA
Sbjct: 69 GGGRKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRA 128
Query: 216 AEGKVSLSVSLSLFLRPS 233
G++ L PS
Sbjct: 129 RNGRIHAVTELVAGQTPS 146
>gi|405376543|ref|ZP_11030497.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. CF142]
gi|397326870|gb|EJJ31181.1| 50S ribosomal protein L4, bacterial/organelle [Rhizobium sp. CF142]
Length = 206
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 78/116 (67%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V +D G + L+ +F + R+DI+ RV+RWQLAK+QQGTH K ++V TG
Sbjct: 1 MELNVKTLEGKDAGKVSLSEAIFGLEPREDILARVIRWQLAKKQQGTHQAKGRADVWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
K ++QKGTGRARH + R PQFRGG HGP RSH L KKVR LGL+ ALSA+
Sbjct: 61 AKMYKQKGTGRARHHSARAPQFRGGGKAHGPVARSHEHDLPKKVRALGLRHALSAK 116
>gi|319899098|ref|YP_004159191.1| 50S ribosomal protein L4 [Bartonella clarridgeiae 73]
gi|319403062|emb|CBI76617.1| 50S ribosomal protein L4 [Bartonella clarridgeiae 73]
Length = 206
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 83/117 (70%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DL+I + ++ G + ++ VF + R+DI+ RVVRWQL +RQ+GTH ++ S+VS T
Sbjct: 2 DLMIKTLD--GKEAGKVKVSESVFGLIPREDILQRVVRWQLTRRQKGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KKVR LGL++ALSA+
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVMRSHAHGLPKKVRALGLRLALSAK 116
>gi|296268551|ref|YP_003651183.1| 50S ribosomal protein L4 [Thermobispora bispora DSM 43833]
gi|296091338|gb|ADG87290.1| ribosomal protein L4/L1e [Thermobispora bispora DSM 43833]
Length = 216
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 89/138 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + G + L ++F + ++H+VV QLA R+QGTH+TKT +VSG GKK
Sbjct: 5 IDVLDANGAKAGTVELPEEIFGAKVNVPLMHQVVVAQLAARRQGTHATKTRGDVSGGGKK 64
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G++R PQF GG T+HGP+PRS+ + KK++ L+ ALS RA+ G+V
Sbjct: 65 PYRQKGTGRARQGSIRAPQFTGGGTVHGPQPRSYDQRTPKKMKAAALRGALSDRASCGRV 124
Query: 221 SLSVSLSLFLRPSFSLSL 238
+ +L P ++L
Sbjct: 125 HVVTNLITGDTPKTKVAL 142
>gi|312109262|ref|YP_003987578.1| 50S ribosomal protein L4/L1e [Geobacillus sp. Y4.1MC1]
gi|336233656|ref|YP_004586272.1| 50S ribosomal protein L4 [Geobacillus thermoglucosidasius C56-YS93]
gi|423718377|ref|ZP_17692559.1| 50S ribosomal protein L4/L1e [Geobacillus thermoglucosidans
TNO-09.020]
gi|311214363|gb|ADP72967.1| ribosomal protein L4/L1e [Geobacillus sp. Y4.1MC1]
gi|335360511|gb|AEH46191.1| ribosomal protein L4/L1e [Geobacillus thermoglucosidasius C56-YS93]
gi|383365187|gb|EID42488.1| 50S ribosomal protein L4/L1e [Geobacillus thermoglucosidans
TNO-09.020]
Length = 207
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 85/131 (64%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + K ++ V Q A +QGTH TK +EVSG
Sbjct: 1 MPKVALYNQNGETIGEIELNDSVFGIEPNKHVLFEAVIMQRASLRQGTHKTKNRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLE 120
Query: 218 GKVSLSVSLSL 228
+ + +L+L
Sbjct: 121 NNIVVLDNLTL 131
>gi|399528200|ref|ZP_10767854.1| 50S ribosomal protein L4 [Actinomyces sp. ICM39]
gi|398361252|gb|EJN45027.1| 50S ribosomal protein L4 [Actinomyces sp. ICM39]
Length = 214
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 90/144 (62%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ D + V + + G +VL G +FDVP ++H+VV QLA +QGTH+TKT EV
Sbjct: 1 MADDRNVDVIDLKGKKAGSVVLPGSIFDVPTNIPLMHQVVVAQLAAARQGTHATKTRGEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+G GKKP+RQKGTG AR G++R P F GG +HGP+PR + + KK+++ L+ ALS R
Sbjct: 61 AGGGKKPFRQKGTGNARQGSIRAPHFTGGGIVHGPQPRDYDQRTPKKMKQGALRSALSDR 120
Query: 215 AAEGKVSLSVSLSLFLRPSFSLSL 238
A ++ + +L +PS +L
Sbjct: 121 ARADRIHVVTALFEGDKPSTKAAL 144
>gi|257790718|ref|YP_003181324.1| 50S ribosomal protein L4 [Eggerthella lenta DSM 2243]
gi|317488571|ref|ZP_07947116.1| ribosomal protein L4/L1 family protein [Eggerthella sp. 1_3_56FAA]
gi|325832045|ref|ZP_08165142.1| 50S ribosomal protein L4 [Eggerthella sp. HGA1]
gi|257474615|gb|ACV54935.1| ribosomal protein L4/L1e [Eggerthella lenta DSM 2243]
gi|316912313|gb|EFV33877.1| ribosomal protein L4/L1 family protein [Eggerthella sp. 1_3_56FAA]
gi|325486366|gb|EGC88818.1| 50S ribosomal protein L4 [Eggerthella sp. HGA1]
Length = 207
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 87/133 (65%), Gaps = 1/133 (0%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G LA VF + ++H+VVR Q A +QGTH TKT +V G GKK
Sbjct: 4 IEIKDASGKKAGTADLAASVFGIEPNVPVMHQVVRAQRASWRQGTHDTKTRGQVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR GT+R PQ+ GG T+ GP PRS+A ++N K +L ++ ALSA+ A+G++
Sbjct: 64 PWRQKGTGRARQGTIRAPQWAGGGTVFGPHPRSYAFRVNNKEVKLAMRSALSAKLADGEL 123
Query: 221 SLSVSLSLFLRPS 233
+ + + F +PS
Sbjct: 124 FVVDAFN-FEKPS 135
>gi|296447531|ref|ZP_06889453.1| ribosomal protein L4/L1e [Methylosinus trichosporium OB3b]
gi|296254919|gb|EFH02024.1| ribosomal protein L4/L1e [Methylosinus trichosporium OB3b]
Length = 206
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 88/130 (67%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I VT++ ++ G + LA ++F + R D+I R++RWQLAKR+ GTH+ K ++++ TG
Sbjct: 1 MQIGVTSYDGQEAGSIELADEIFGLEPRTDLIFRMIRWQLAKRRAGTHAVKNRADIARTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQF GG GP RSH L KKVR L LK ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSRRVPQFIGGGRAFGPVVRSHEHDLPKKVRALALKHALSAKAKDG 120
Query: 219 KVSLSVSLSL 228
+ + + SL
Sbjct: 121 AIIVWENASL 130
>gi|154507863|ref|ZP_02043505.1| hypothetical protein ACTODO_00345 [Actinomyces odontolyticus ATCC
17982]
gi|153797497|gb|EDN79917.1| 50S ribosomal protein L4 [Actinomyces odontolyticus ATCC 17982]
Length = 216
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 90/144 (62%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ D + V + + G +VL G +FDVP ++H+VV QLA +QGTH+TKT EV
Sbjct: 3 MADDRNVDVIDLKGKKAGSVVLPGSIFDVPTNIPLMHQVVVAQLAAARQGTHATKTRGEV 62
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+G GKKP+RQKGTG AR G++R P F GG +HGP+PR + + KK+++ L+ ALS R
Sbjct: 63 AGGGKKPFRQKGTGNARQGSIRAPHFTGGGIVHGPQPRDYDQRTPKKMKQGALRSALSDR 122
Query: 215 AAEGKVSLSVSLSLFLRPSFSLSL 238
A ++ + +L +PS +L
Sbjct: 123 ARADRIHVVTALFEGDKPSTKAAL 146
>gi|293190258|ref|ZP_06608754.1| ribosomal protein L4/L1 family protein [Actinomyces odontolyticus
F0309]
gi|292821074|gb|EFF80027.1| ribosomal protein L4/L1 family protein [Actinomyces odontolyticus
F0309]
Length = 216
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 90/144 (62%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ D + V + + G +VL G +FDVP ++H+VV QLA +QGTH+TKT EV
Sbjct: 3 MADDRNVDVIDIKGKKAGSVVLPGSIFDVPTNIPLMHQVVVAQLAAARQGTHATKTRGEV 62
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+G GKKP+RQKGTG AR G++R P F GG +HGP+PR + + KK+++ L+ ALS R
Sbjct: 63 AGGGKKPFRQKGTGNARQGSIRAPHFTGGGIVHGPQPRDYDQRTPKKMKQGALRSALSDR 122
Query: 215 AAEGKVSLSVSLSLFLRPSFSLSL 238
A ++ + +L +PS +L
Sbjct: 123 ARADRIHVVTALFEGDKPSTKAAL 146
>gi|154483186|ref|ZP_02025634.1| hypothetical protein EUBVEN_00887 [Eubacterium ventriosum ATCC
27560]
gi|149735994|gb|EDM51880.1| 50S ribosomal protein L4 [Eubacterium ventriosum ATCC 27560]
Length = 206
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 78/120 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L+ VF V + + ++H+ V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVLNMEGSEVGTIELSDAVFGVEVNEHLVHQAVLSQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ+ GG + P PR ++ K+NKK +R+ LK AL++R EGK+
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYSFKMNKKEKRIALKSALTSRVNEGKL 123
>gi|196006758|ref|XP_002113245.1| hypothetical protein TRIADDRAFT_27010 [Trichoplax adhaerens]
gi|190583649|gb|EDV23719.1| hypothetical protein TRIADDRAFT_27010, partial [Trichoplax
adhaerens]
Length = 220
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 73/104 (70%)
Query: 125 IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGGT 184
+R DI+HR V WQLAKR+ GT TK EV G G+KPW QKG+GRAR G++R P FRGG
Sbjct: 1 LRIDILHRYVVWQLAKRRAGTAKTKNRGEVRGGGRKPWPQKGSGRARQGSIRAPHFRGGG 60
Query: 185 TMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
T+HGP+PRS+ +KVR + +++ALS + A+G + + S L
Sbjct: 61 TVHGPRPRSYDFTFPRKVRSMAIRVALSVKFAQGDLYIVDSFGL 104
>gi|118444236|ref|YP_877199.1| 50S ribosomal protein L4 [Clostridium novyi NT]
gi|166234658|sp|A0PXU7.1|RL4_CLONN RecName: Full=50S ribosomal protein L4
gi|118134692|gb|ABK61736.1| ribosomal protein L4/L1 family [Clostridium novyi NT]
Length = 206
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +N + G + LA VF V + +D++H+VV QLA ++QG S KT +EVSG
Sbjct: 1 MPTVDLYNIEGQKVGDLQLAETVFAVEVNEDVLHQVVVAQLANKRQGNQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRAR G++R PQ+ G + PKPR + + + K +RR+ +K AL+++ E
Sbjct: 61 GKKPWRQKGTGRARQGSIRAPQWIHGGVVFAPKPRDYKMSIPKSMRRVAMKSALTSKVNE 120
Query: 218 GKVSLSVSLSL 228
++ + SL L
Sbjct: 121 NELVVLESLEL 131
>gi|296131837|ref|YP_003639084.1| 50S ribosomal protein L4 [Thermincola potens JR]
gi|296030415|gb|ADG81183.1| ribosomal protein L4/L1e [Thermincola potens JR]
Length = 206
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 83/128 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + L +VF + + ++H VV QLA R+ GT STKT +EVSG G+K
Sbjct: 4 VALYNIKGEQVGEIELKDEVFGIEPNEGLVHDVVVMQLANRRVGTASTKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRARHG++R P +RGG GPKPRS + KK RRL LK LS++ ++G +
Sbjct: 64 PWRQKGTGRARHGSIRSPIWRGGGITFGPKPRSFNYTMPKKARRLALKSVLSSKVSDGNI 123
Query: 221 SLSVSLSL 228
+ +L +
Sbjct: 124 IVLDTLEM 131
>gi|407474712|ref|YP_006789112.1| 50S ribosomal protein L4 [Clostridium acidurici 9a]
gi|407051220|gb|AFS79265.1| 50S ribosomal protein L4 [Clostridium acidurici 9a]
Length = 213
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 80/120 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + L +F V + + +++ VV+ QLA ++QGT S KT +EV G G+K
Sbjct: 10 VALYNVTGEQVGDIELNDSIFGVEVNQHVLYEVVKNQLANKRQGTQSVKTRAEVRGGGRK 69
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ R PQ+ GG + PKPR ++ K+ KKVRRL +K ALS++ A ++
Sbjct: 70 PWRQKGTGRARQGSTRAPQWVGGGVVFAPKPRDYSYKVPKKVRRLAMKSALSSKVANNEI 129
>gi|293402502|ref|ZP_06646637.1| ribosomal protein L4/L1 family protein [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291304016|gb|EFE45270.1| ribosomal protein L4/L1 family protein [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 209
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 73/109 (66%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
+ LA VF + + I + Q A +QGTH TK +EV G G+KPWRQKGTGRAR G
Sbjct: 17 ITLADTVFGIEPNQQCIFDAIVMQRASMRQGTHDTKNRTEVRGGGRKPWRQKGTGRARQG 76
Query: 174 TLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
++R Q+RGG T+ GP PRS+A KLNKKVRRL LK LS + AE +S+
Sbjct: 77 SIRATQWRGGGTVFGPTPRSYAYKLNKKVRRLALKSVLSEKVAENAMSV 125
>gi|138893786|ref|YP_001124239.1| 50S ribosomal protein L4 [Geobacillus thermodenitrificans NG80-2]
gi|166234670|sp|A4IJJ0.1|RL4_GEOTN RecName: Full=50S ribosomal protein L4
gi|134265299|gb|ABO65494.1| Ribosomal protein L4 [Geobacillus thermodenitrificans NG80-2]
Length = 207
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + K ++ V Q A +QGTH TK +EVSG
Sbjct: 1 MPKVALYNQNGQTIGEIELNDAVFGIEPNKHVLFEAVIMQRASMRQGTHKTKNRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLE 120
Query: 218 GKVSLSVSLSL 228
+ + LSL
Sbjct: 121 NDIVVLDQLSL 131
>gi|239825694|ref|YP_002948318.1| 50S ribosomal protein L4 [Geobacillus sp. WCH70]
gi|259491561|sp|C5D3R8.1|RL4_GEOSW RecName: Full=50S ribosomal protein L4
gi|239805987|gb|ACS23052.1| ribosomal protein L4/L1e [Geobacillus sp. WCH70]
Length = 207
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N E G + L VF + K ++ V Q A +QGTH TK +EVSG
Sbjct: 1 MPKVALYNQSGETIGEIELNDSVFGIEPNKHVLFEAVIMQRASLRQGTHKTKNRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLE 120
Query: 218 GKVSLSVSLSL 228
+ + +L+L
Sbjct: 121 NNIVVLDNLTL 131
>gi|196251023|ref|ZP_03149705.1| ribosomal protein L4/L1e [Geobacillus sp. G11MC16]
gi|196209495|gb|EDY04272.1| ribosomal protein L4/L1e [Geobacillus sp. G11MC16]
Length = 207
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + K ++ V Q A +QGTH TK +EVSG
Sbjct: 1 MPKVALYNQNGQTIGEIELNDAVFGIEPNKHVLFEAVIMQRASMRQGTHKTKNRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLE 120
Query: 218 GKVSLSVSLSL 228
+ + LSL
Sbjct: 121 NDIVVLDQLSL 131
>gi|114771268|ref|ZP_01448688.1| 50S ribosomal protein L4 [Rhodobacterales bacterium HTCC2255]
gi|114548193|gb|EAU51080.1| 50S ribosomal protein L4 [Rhodobacterales bacterium HTCC2255]
Length = 206
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 73/109 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VF + R DI+HRVVR+QLAKRQ GTH KT SE S + KK + QKGTG AR
Sbjct: 14 GSIDLDDSVFGLEPRADILHRVVRYQLAKRQAGTHKVKTRSETSYSTKKIYNQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
HG P FRGG GPK RSHA L KK R+LGLK ALSA+A G++
Sbjct: 74 HGDRNAPIFRGGGVYKGPKVRSHAHDLTKKFRKLGLKHALSAKATAGEL 122
>gi|148256391|ref|YP_001240976.1| 50S ribosomal protein L4 [Bradyrhizobium sp. BTAi1]
gi|166234638|sp|A5ELM6.1|RL4_BRASB RecName: Full=50S ribosomal protein L4
gi|146408564|gb|ABQ37070.1| LSU ribosomal protein L4P [Bradyrhizobium sp. BTAi1]
Length = 206
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 78/120 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT +D G + L+ +F + R DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKDAGSVQLSDAIFGLEPRVDIIQRCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR L LK ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSARVPQFRGGGRAFGPVVRSHATDLPKKVRALALKHALSAKAKDG 120
>gi|110180290|gb|ABG54388.1| 23S ribosomal protein L4 [Brucella pinnipedialis]
Length = 206
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 77/115 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
++QKGTGRA H + R PQFRGG HGP R+H L KKVR LGL+ ALSA+A
Sbjct: 63 MYKQKGTGRASHHSARAPQFRGGGQAHGPVVRNHDHDLPKKVRALGLRHALSAKA 117
>gi|86749416|ref|YP_485912.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris HaA2]
gi|109893629|sp|Q2IXQ9.1|RL4_RHOP2 RecName: Full=50S ribosomal protein L4
gi|86572444|gb|ABD07001.1| LSU ribosomal protein L4P [Rhodopseudomonas palustris HaA2]
Length = 206
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 89/150 (59%), Gaps = 7/150 (4%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R DI+ R V WQLAKRQ GTH K +EV TG
Sbjct: 1 MELKVTTLEGQEAGSVQLSDAIFGLEPRNDIVQRCVIWQLAKRQAGTHKAKGRAEVWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHAI L KKVR L L+ ALSA+A G
Sbjct: 61 KKMYKQKGTGGARHGSQRVPQFRGGGRAFGPVVRSHAIDLPKKVRALALRHALSAKAKGG 120
Query: 219 ------KVSLSVSLSLFLRPSFS-LSLKNT 241
K L + + L +FS L L N
Sbjct: 121 GLIVIDKAELEAAKTKALVGAFSGLGLTNA 150
>gi|343520774|ref|ZP_08757743.1| 50S ribosomal protein L4 [Parvimonas sp. oral taxon 393 str. F0440]
gi|343397732|gb|EGV10266.1| 50S ribosomal protein L4 [Parvimonas sp. oral taxon 393 str. F0440]
Length = 207
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 87/131 (66%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N +N E G + L +F + + + +++ VV+ LA R+QGT S KT +EV G
Sbjct: 1 MPKVNVYNQLGEVVGDIELNEAIFGIEVNEHVVYEVVKNHLANRRQGTQSAKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ++GG + PKPRS+ + KKVRRL +K L+++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQWKGGGVVFAPKPRSYRYSVPKKVRRLAMKSVLTSKVLE 120
Query: 218 GKVSLSVSLSL 228
G++ + +L++
Sbjct: 121 GELRILDALTV 131
>gi|256369656|ref|YP_003107166.1| 50S ribosomal protein L4 [Brucella microti CCM 4915]
gi|255999818|gb|ACU48217.1| 50S ribosomal protein L4 [Brucella microti CCM 4915]
Length = 206
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 77/115 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDADKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
++QKGTGRARH + R PQFRGG HGP R+H L KKVR LGL+ ALSA+A
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGQAHGPVVRNHDHDLPKKVRALGLRHALSAKA 117
>gi|110180274|gb|ABG54380.1| 23S ribosomal protein L4 [Brucella ceti]
gi|110180278|gb|ABG54382.1| 23S ribosomal protein L4 [Brucella ceti]
Length = 206
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 77/115 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
++QKGT RARH + R PQFRGG HGP R+H L KKVR LGL+ ALSA+A
Sbjct: 63 MYKQKGTDRARHHSARAPQFRGGGQAHGPVVRNHDHDLPKKVRALGLRHALSAKA 117
>gi|39936312|ref|NP_948588.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris CGA009]
gi|192292036|ref|YP_001992641.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris TIE-1]
gi|46577158|sp|P61068.1|RL4_RHOPA RecName: Full=50S ribosomal protein L4; AltName: Full=RRP-L4
gi|226730715|sp|B3QBX9.1|RL4_RHOPT RecName: Full=50S ribosomal protein L4
gi|39650167|emb|CAE28690.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris CGA009]
gi|192285785|gb|ACF02166.1| ribosomal protein L4/L1e [Rhodopseudomonas palustris TIE-1]
Length = 206
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 79/120 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ ++F + R DII R V WQLAKRQ GTH K +EV TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDEIFGLEPRSDIIQRCVIWQLAKRQAGTHKAKGRAEVWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHAI L KKVR L L+ ALSA+A G
Sbjct: 61 KKMYKQKGTGGARHGSQRVPQFRGGGRAFGPVVRSHAIDLPKKVRVLALRHALSAKAKGG 120
>gi|433645835|ref|YP_007290837.1| LSU ribosomal protein L4P [Mycobacterium smegmatis JS623]
gi|433295612|gb|AGB21432.1| LSU ribosomal protein L4P [Mycobacterium smegmatis JS623]
Length = 231
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 83/135 (61%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + G + L ++FDV ++H+VV QLA ++QGTHSTKT EV G G
Sbjct: 6 LKIDVNTPAGKKDGSVELPAELFDVEPNIALMHQVVEAQLAAKRQGTHSTKTRGEVRGGG 65
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTGRAR G+ R PQF GG T+HGP+PR ++ + KK+ L+ ALS RA G
Sbjct: 66 KKPYRQKGTGRARQGSTRAPQFTGGGTVHGPQPRDYSQRTPKKMIAAALRGALSDRARNG 125
Query: 219 KVSLSVSLSLFLRPS 233
++ L PS
Sbjct: 126 RIHAVTELVEGQTPS 140
>gi|299470351|emb|CBN78400.1| 50S ribosomal protein L4P [Ectocarpus siliculosus]
Length = 307
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 76/107 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
LA VF VP+R+D++H VVRWQLA+R++G TK I E+SG+G+K QKG G AR G
Sbjct: 116 LAPSVFGVPVRRDVVHEVVRWQLARRRKGNGQTKRIGEISGSGRKVRPQKGGGVARAGHS 175
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
R P +RGG HGP+ R + KLNKK RLGL++ALSAR EG++ +
Sbjct: 176 RPPHWRGGAKAHGPRRRDFSFKLNKKFVRLGLRVALSARLREGQLKV 222
>gi|27353674|dbj|BAC50664.1| 50S ribosomal protein L4 [Bradyrhizobium japonicum USDA 110]
Length = 220
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 92/152 (60%), Gaps = 7/152 (4%)
Query: 97 QDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSG 156
+++ + VT ++ G + L+ +F + R+DII R V+WQL KRQ GTH K +E+
Sbjct: 13 REMELKVTTLEGKEAGSVQLSDAIFGLEPRQDIIARCVQWQLNKRQAGTHKAKGRAEIWR 72
Query: 157 TGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
TGKK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR L LK ALSA+A
Sbjct: 73 TGKKMYKQKGTGGARHGSARVPQFRGGGRAFGPVVRSHATDLPKKVRALALKHALSAKAK 132
Query: 217 EG------KVSLSVSLSLFLRPSFS-LSLKNT 241
+G K +L + + L FS L L N
Sbjct: 133 DGDLLVIDKAALEAAKTKALLGHFSGLGLTNA 164
>gi|441516755|ref|ZP_20998500.1| 50S ribosomal protein L4 [Gordonia hirsuta DSM 44140 = NBRC 16056]
gi|441456376|dbj|GAC56461.1| 50S ribosomal protein L4 [Gordonia hirsuta DSM 44140 = NBRC 16056]
Length = 219
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 81/123 (65%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G + L D+FDV ++H+VV Q A +QGTHSTKT EV G G KP+RQKGTGRA
Sbjct: 21 EGTVQLPADLFDVTANIALMHQVVVAQQAAGRQGTHSTKTRGEVRGGGVKPYRQKGTGRA 80
Query: 171 RHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFL 230
R G++R PQF GG T+HGP+PR ++ K+NKK++ L+ ALS RA ++ + L
Sbjct: 81 RQGSIRSPQFVGGGTVHGPQPRDYSQKVNKKMKAAALRGALSDRARNERIHVVTELVQGQ 140
Query: 231 RPS 233
PS
Sbjct: 141 SPS 143
>gi|404443138|ref|ZP_11008311.1| 50S ribosomal protein L4 [Mycobacterium vaccae ATCC 25954]
gi|403656052|gb|EJZ10876.1| 50S ribosomal protein L4 [Mycobacterium vaccae ATCC 25954]
Length = 222
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 79/122 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA ++QGTHSTKT EVSG GKKP+RQKGTGRAR
Sbjct: 16 GSIELPAELFDVEPNIALMHQVVNAQLAAKRQGTHSTKTRGEVSGGGKKPYRQKGTGRAR 75
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGPKPR ++ + KK+ R L+ ALS RA ++ L
Sbjct: 76 QGSTRAPQFTGGGIVHGPKPRDYSERTPKKMIRAALRSALSDRARNDRIHAVTELIEGQT 135
Query: 232 PS 233
PS
Sbjct: 136 PS 137
>gi|403510152|ref|YP_006641790.1| 50S ribosomal protein L4 [Nocardiopsis alba ATCC BAA-2165]
gi|402799443|gb|AFR06853.1| 50S ribosomal protein L4 [Nocardiopsis alba ATCC BAA-2165]
Length = 223
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 81/122 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N KG + L VF + +IH+VV QLA +QGTH+TKT EV G GKK
Sbjct: 4 IEVKNPEGGSKGSVELPESVFAQQVSIPLIHQVVNGQLAAARQGTHATKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G++R PQ+ GG T+HGP+PR ++ + KK++ L+ ALS RAA G++
Sbjct: 64 PYRQKGTGRARQGSIRAPQYTGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRAAHGRI 123
Query: 221 SL 222
+
Sbjct: 124 HV 125
>gi|168187813|ref|ZP_02622448.1| ribosomal protein L4/L1 family [Clostridium botulinum C str.
Eklund]
gi|169294356|gb|EDS76489.1| ribosomal protein L4/L1 family [Clostridium botulinum C str.
Eklund]
Length = 206
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +N + G + LA VF V + +D++H+VV QLA ++QG S KT +EVSG
Sbjct: 1 MPTVDLYNREGQKVGDLQLADTVFAVEVNEDVLHQVVVAQLANKRQGNQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRAR G++R PQ+ G + PKPR + + + K +RR+ +K AL+++ E
Sbjct: 61 GKKPWRQKGTGRARQGSIRAPQWIHGGVVFAPKPRDYKMSIPKSMRRVAMKSALTSKVNE 120
Query: 218 GKVSLSVSLSL 228
++ + SL L
Sbjct: 121 KELVVLESLEL 131
>gi|154245624|ref|YP_001416582.1| 50S ribosomal protein L4 [Xanthobacter autotrophicus Py2]
gi|226731446|sp|A7IFY2.1|RL4_XANP2 RecName: Full=50S ribosomal protein L4
gi|154159709|gb|ABS66925.1| ribosomal protein L4/L1e [Xanthobacter autotrophicus Py2]
Length = 206
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 82/130 (63%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I V + G + L+ ++F + R DI+HR V WQL++RQ GTH TK SE++ T
Sbjct: 1 MEITVKTLDGIEAGSVTLSDEIFGLEPRADILHRCVTWQLSRRQAGTHRTKGRSEINRTS 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG PQFRGG GP RSHAI L KKVR L LK ALS++A
Sbjct: 61 KKMYKQKGTGNARHGAASAPQFRGGGRAFGPVVRSHAIDLPKKVRALALKHALSSKAKAA 120
Query: 219 KVSLSVSLSL 228
++ + +SL
Sbjct: 121 QIIVLDKVSL 130
>gi|15612698|ref|NP_241001.1| 50S ribosomal protein L4 [Bacillus halodurans C-125]
gi|7674304|sp|Q9Z9L3.1|RL4_BACHD RecName: Full=50S ribosomal protein L4
gi|4512405|dbj|BAA75272.1| rplD [Bacillus halodurans]
gi|10172747|dbj|BAB03854.1| 50S ribosomal protein L4 [Bacillus halodurans C-125]
Length = 207
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + L+ VF + ++++H V Q A +QGTH TKT SEV G
Sbjct: 1 MPKVALYNQAGSQVGDIELSDAVFGIEPNENVLHDAVVMQQASLRQGTHKTKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+ GG T+ GP PRS++ KL KKVRRL +K ALS++
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYSYKLPKKVRRLAIKSALSSKVKA 120
Query: 218 GKVSLSVSLSL 228
++ + SL+L
Sbjct: 121 EEIVVLESLAL 131
>gi|222617092|gb|EEE53224.1| hypothetical protein OsJ_36122 [Oryza sativa Japonica Group]
Length = 227
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/61 (88%), Positives = 58/61 (95%)
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
+P++QKGTGRARHGTLRGPQFRGG TMHGPKPRSHAIKL KKVRRLGLKIALSAR AEGK
Sbjct: 77 QPYKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLQKKVRRLGLKIALSARTAEGK 136
Query: 220 V 220
+
Sbjct: 137 L 137
>gi|375098811|ref|ZP_09745074.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
cyanea NA-134]
gi|374659543|gb|EHR59421.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
cyanea NA-134]
Length = 227
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 81/125 (64%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E +G + L ++FDV ++H+VV Q+A +QGTH TKT EV G G+KP+RQKGTG
Sbjct: 13 EAQGTVELPAEIFDVQANIPLMHQVVVAQMAAARQGTHDTKTRGEVRGGGRKPYRQKGTG 72
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQF GG T+HGP PR + + KK++ L+ ALS RA G+V + L
Sbjct: 73 RARQGSVRAPQFAGGGTVHGPTPRDYTQRTPKKMKAAALRGALSDRARAGQVHVITELVS 132
Query: 229 FLRPS 233
+PS
Sbjct: 133 AEKPS 137
>gi|395767222|ref|ZP_10447757.1| 50S ribosomal protein L4 [Bartonella doshiae NCTC 12862]
gi|395414535|gb|EJF80977.1| 50S ribosomal protein L4 [Bartonella doshiae NCTC 12862]
Length = 206
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 80/117 (68%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DL+I + + G + ++ +F + R+DI+ RVV WQLA+RQQGTH ++ S+VS T
Sbjct: 2 DLIIKTLD--GNEAGKLTVSRGIFGLVPREDILQRVVLWQLARRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KKVR LGL +ALS +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVVRSHAHDLPKKVRALGLCLALSVK 116
>gi|148284213|ref|YP_001248303.1| 50S ribosomal protein L4 [Orientia tsutsugamushi str. Boryong]
gi|189183952|ref|YP_001937737.1| 50S ribosomal protein L4 [Orientia tsutsugamushi str. Ikeda]
gi|166234696|sp|A5CCL1.1|RL4_ORITB RecName: Full=50S ribosomal protein L4
gi|226730701|sp|B3CT06.1|RL4_ORITI RecName: Full=50S ribosomal protein L4
gi|146739652|emb|CAM79441.1| 50S ribosomal protein L4 [Orientia tsutsugamushi str. Boryong]
gi|189180723|dbj|BAG40503.1| 50S ribosomal protein L4 [Orientia tsutsugamushi str. Ikeda]
Length = 210
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 75/120 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E + + L VF + R DII V+ WQLAKR GTH TKTIS VSGT KK
Sbjct: 3 VKVYNLLQEIEKEVELNPSVFCLKYRPDIIKLVIDWQLAKRMSGTHCTKTISGVSGTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P++QKGTG AR G+LR Q RGG HGP RSH + KK+R+ LK ALS + + K+
Sbjct: 63 PFKQKGTGNARQGSLRSVQMRGGGISHGPVVRSHEFDVPKKIRKQALKYALSYKLSVNKL 122
>gi|28212174|ref|NP_783118.1| 50S ribosomal protein L4 [Clostridium tetani E88]
gi|46577246|sp|Q890P0.1|RL4_CLOTE RecName: Full=50S ribosomal protein L4
gi|28204618|gb|AAO37055.1| LSU ribosomal protein L1E(= L4P) [Clostridium tetani E88]
Length = 206
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 87/130 (66%), Gaps = 3/130 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G L+ VF V + K+++H+V+ QLA ++QGT S+KT +EVSG
Sbjct: 1 MPTVGLFNKEGQKVGDFQLSDKVFGVEVNKEVLHQVIVAQLANKRQGTQSSKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+ G + PKPR +++ + K ++R+ +K ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQWIKGGVVFAPKPRDYSMAIPKSMKRVAMKSALSSKVQE 120
Query: 218 GKVSLSVSLS 227
++ + SL
Sbjct: 121 NEIVILESLE 130
>gi|289423702|ref|ZP_06425501.1| ribosomal protein, L4/L1 family [Peptostreptococcus anaerobius
653-L]
gi|429727971|ref|ZP_19262717.1| 50S ribosomal protein L4 [Peptostreptococcus anaerobius VPI 4330]
gi|289155952|gb|EFD04618.1| ribosomal protein, L4/L1 family [Peptostreptococcus anaerobius
653-L]
gi|429150828|gb|EKX93722.1| 50S ribosomal protein L4 [Peptostreptococcus anaerobius VPI 4330]
Length = 207
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 84/128 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N ++ G + L +FD+ + + +++ V+ QLA ++QGT S KT +EV G G+K
Sbjct: 4 INVLNVSGQNVGEIELNDSIFDIEVNEHVLYEAVKCQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R Q+ GG PKPR ++ L KKVRRL +K ALS++ + ++
Sbjct: 64 PWRQKGTGRARQGSIRSVQWVGGGVAFAPKPRDYSYSLPKKVRRLAMKSALSSKVQDKEI 123
Query: 221 SLSVSLSL 228
+ +LSL
Sbjct: 124 IVLDALSL 131
>gi|297569421|ref|YP_003690765.1| ribosomal protein L4/L1e [Desulfurivibrio alkaliphilus AHT2]
gi|296925336|gb|ADH86146.1| ribosomal protein L4/L1e [Desulfurivibrio alkaliphilus AHT2]
Length = 207
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 80/118 (67%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V V N E G + L +F V + ++H +VR Q A R+ GT TKT +VSG+GK
Sbjct: 3 VTEVYNIKKEKVGDVELDDALFGVEVNPHLLHDIVRMQRANRRAGTACTKTRKDVSGSGK 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
KPWRQKGTGRAR G+ + P +RGG T+ GP+PRS+A + +K R+LGL++ALS+R A+
Sbjct: 63 KPWRQKGTGRARAGSRKSPVWRGGGTVFGPRPRSYAFSMPRKARKLGLRMALSSRCAD 120
>gi|293375390|ref|ZP_06621671.1| ribosomal protein L4/L1 family protein [Turicibacter sanguinis
PC909]
gi|325844472|ref|ZP_08168199.1| 50S ribosomal protein L4 [Turicibacter sp. HGF1]
gi|292645943|gb|EFF63972.1| ribosomal protein L4/L1 family protein [Turicibacter sanguinis
PC909]
gi|325489146|gb|EGC91530.1| 50S ribosomal protein L4 [Turicibacter sp. HGF1]
Length = 207
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 79/123 (64%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G +VL +F + K + V Q A +QGTH TKT +EV G
Sbjct: 1 MPQVALYNQQGAQVGEIVLNEAIFGIEPHKQAMFDAVIMQRASMRQGTHKTKTRTEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPW+QKGTGRAR G++R PQ+RGG + GP PRS+A KLNKKVRRL LK AL+ + E
Sbjct: 61 GRKPWKQKGTGRARQGSIRAPQWRGGGIVFGPVPRSYAYKLNKKVRRLALKSALATKVVE 120
Query: 218 GKV 220
++
Sbjct: 121 NEI 123
>gi|220903935|ref|YP_002479247.1| 50S ribosomal protein L4 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254803730|sp|B8IYH3.1|RL4_DESDA RecName: Full=50S ribosomal protein L4
gi|219868234|gb|ACL48569.1| ribosomal protein L4/L1e [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 210
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 79/116 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G + LA DVF++ +R +I++ V R Q+A ++ GTH+ KT + VSG G K
Sbjct: 4 VKVYDQNKQESGEVTLASDVFEIEVRPEILNLVARAQMAAKRAGTHNVKTRAFVSGGGAK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
PW+QKGTGRAR G+ R P +RGG GP PR + K+N KVR L LK+ALS+R A
Sbjct: 64 PWKQKGTGRARAGSNRSPIWRGGAITFGPSPRDYTFKVNSKVRSLALKMALSSRLA 119
>gi|435852976|ref|YP_007314295.1| 50S ribosomal protein L4, bacterial/organelle [Halobacteroides
halobius DSM 5150]
gi|433669387|gb|AGB40202.1| 50S ribosomal protein L4, bacterial/organelle [Halobacteroides
halobius DSM 5150]
Length = 209
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 83/122 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+P+ + + G + L ++FDV I ++++H V QLA ++ GT TKT +V G G+K
Sbjct: 4 LPLYDTEGQTVGNVDLNDEIFDVEINENVVHEAVTAQLAAKRAGTAKTKTRGQVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRARHG++R P + GG T GP+PRS+ + KKV++L +K ALSA+ AE +
Sbjct: 64 PWRQKGTGRARHGSIRSPIWVGGGTTFGPQPRSYEKNVPKKVKKLAVKSALSAKVAENSL 123
Query: 221 SL 222
S+
Sbjct: 124 SV 125
>gi|315222819|ref|ZP_07864705.1| ribosomal protein L4/L1 family protein [Streptococcus anginosus
F0211]
gi|418962820|ref|ZP_13514670.1| 50S ribosomal protein L4 [Streptococcus anginosus subsp. whileyi
CCUG 39159]
gi|418966151|ref|ZP_13517900.1| 50S ribosomal protein L4 [Streptococcus constellatus subsp.
constellatus SK53]
gi|423069701|ref|ZP_17058486.1| 50S ribosomal protein L4 [Streptococcus intermedius F0395]
gi|423071652|ref|ZP_17060425.1| 50S ribosomal protein L4 [Streptococcus intermedius F0413]
gi|424788622|ref|ZP_18215373.1| 50S ribosomal protein L4 [Streptococcus intermedius BA1]
gi|315188122|gb|EFU21851.1| ribosomal protein L4/L1 family protein [Streptococcus anginosus
F0211]
gi|355363426|gb|EHG11163.1| 50S ribosomal protein L4 [Streptococcus intermedius F0413]
gi|355364123|gb|EHG11857.1| 50S ribosomal protein L4 [Streptococcus intermedius F0395]
gi|383340805|gb|EID19093.1| 50S ribosomal protein L4 [Streptococcus constellatus subsp.
constellatus SK53]
gi|383345023|gb|EID23168.1| 50S ribosomal protein L4 [Streptococcus anginosus subsp. whileyi
CCUG 39159]
gi|422112607|gb|EKU16390.1| 50S ribosomal protein L4 [Streptococcus intermedius BA1]
Length = 207
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 78/120 (65%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG T+ GP PRS+A KL +KVRRL LK S + AE K SLS
Sbjct: 72 RARQGSIRSPQWRGGGTVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAENKFVAVDSLSF 131
>gi|163760800|ref|ZP_02167879.1| 50S ribosomal protein L4 [Hoeflea phototrophica DFL-43]
gi|162281844|gb|EDQ32136.1| 50S ribosomal protein L4 [Hoeflea phototrophica DFL-43]
Length = 206
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 81/127 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ VT + G + L+ +F + R+D+I R+VRWQLAK+QQG H T SE+S TG K
Sbjct: 3 LTVTTLEGKSAGKISLSDAIFGLEPRQDLIQRIVRWQLAKKQQGGHKTLGRSEISRTGAK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
++QKGTGRARH PQFRGG HGP RSHA L KKVR L L+ ALSA+A +
Sbjct: 63 MFKQKGTGRARHHAASAPQFRGGGRAHGPVVRSHAHDLPKKVRALALRHALSAKAQASDI 122
Query: 221 SLSVSLS 227
+ SL+
Sbjct: 123 IIVDSLT 129
>gi|316933528|ref|YP_004108510.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris DX-1]
gi|315601242|gb|ADU43777.1| ribosomal protein L4/L1e [Rhodopseudomonas palustris DX-1]
Length = 206
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 78/120 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT + G + L+ ++F + R DII R V WQLAKRQ GTH K +EV TG
Sbjct: 1 MELKVTTLEGNEAGSVQLSDEIFGLEPRTDIIQRCVIWQLAKRQAGTHKAKGRAEVWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHAI L KKVR L L+ ALSA+A G
Sbjct: 61 KKMYKQKGTGGARHGSQRVPQFRGGGRAFGPVVRSHAIDLPKKVRVLALRHALSAKAKGG 120
>gi|398822815|ref|ZP_10581190.1| 50S ribosomal protein L4, bacterial/organelle [Bradyrhizobium sp.
YR681]
gi|398226521|gb|EJN12768.1| 50S ribosomal protein L4, bacterial/organelle [Bradyrhizobium sp.
YR681]
Length = 206
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 90/150 (60%), Gaps = 7/150 (4%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R+DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDTIFGLEPRQDIIARCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR L LK ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSARVPQFRGGGRAFGPVVRSHATDLPKKVRALALKHALSAKAKDG 120
Query: 219 ------KVSLSVSLSLFLRPSFS-LSLKNT 241
K +L + + L FS L L N
Sbjct: 121 DLIVIEKAALEAAKTKALLGHFSGLGLTNA 150
>gi|110180276|gb|ABG54381.1| 23S ribosomal protein L4 [Brucella ceti]
gi|110180280|gb|ABG54383.1| 23S ribosomal protein L4 [Brucella ceti]
Length = 206
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 77/115 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
++QKGTGRA H + R PQFRGG HGP R+H L KKVR LGL+ ALSA+A
Sbjct: 63 MYKQKGTGRACHHSARAPQFRGGGQAHGPVVRNHDHDLPKKVRALGLRHALSAKA 117
>gi|357020694|ref|ZP_09082925.1| 50S ribosomal protein L4 [Mycobacterium thermoresistibile ATCC
19527]
gi|356478442|gb|EHI11579.1| 50S ribosomal protein L4 [Mycobacterium thermoresistibile ATCC
19527]
Length = 220
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 79/123 (64%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G + L ++FDV ++H+VV QLA +QGTHSTKT EV G G+KPWRQKGTGRA
Sbjct: 13 EGSVELPAELFDVEPNIALMHQVVTAQLAAARQGTHSTKTRGEVRGGGRKPWRQKGTGRA 72
Query: 171 RHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFL 230
R G+LR PQF GG +HGPKPR ++ + KK+ L+ ALS RA G++ L
Sbjct: 73 RQGSLRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVEGQ 132
Query: 231 RPS 233
PS
Sbjct: 133 TPS 135
>gi|91977651|ref|YP_570310.1| 50S ribosomal protein L4 [Rhodopseudomonas palustris BisB5]
gi|123762621|sp|Q134T0.1|RL4_RHOPS RecName: Full=50S ribosomal protein L4
gi|91684107|gb|ABE40409.1| LSU ribosomal protein L4P [Rhodopseudomonas palustris BisB5]
Length = 206
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 90/150 (60%), Gaps = 7/150 (4%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R+DI+ R V WQLAKRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDAIFGLEPRQDIVQRCVIWQLAKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHAI L KKVR L L+ ALSA+A G
Sbjct: 61 KKMYKQKGTGGARHGSQRVPQFRGGGRAFGPVVRSHAIDLPKKVRALALRHALSAKAKGG 120
Query: 219 ------KVSLSVSLSLFLRPSFS-LSLKNT 241
K L + + L +FS L L N
Sbjct: 121 GLIVIDKAELEAAKTKALVGAFSGLGLTNA 150
>gi|261222394|ref|ZP_05936675.1| ribosomal protein L4 [Brucella ceti B1/94]
gi|265998359|ref|ZP_06110916.1| ribosomal protein L4 [Brucella ceti M490/95/1]
gi|82798206|gb|ABB91855.1| ribosomal protein L4 [Brucella ceti]
gi|260920978|gb|EEX87631.1| ribosomal protein L4 [Brucella ceti B1/94]
gi|262552827|gb|EEZ08817.1| ribosomal protein L4 [Brucella ceti M490/95/1]
Length = 206
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 77/115 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
++QKGTGRARH + R PQFRGG HGP R+H L KKV LGL+ ALSA+A
Sbjct: 63 MYKQKGTGRARHHSARAPQFRGGGQAHGPVVRNHDHDLPKKVLALGLRHALSAKA 117
>gi|383771136|ref|YP_005450201.1| 50S ribosomal protein L4 [Bradyrhizobium sp. S23321]
gi|381359259|dbj|BAL76089.1| 50S ribosomal protein L4 [Bradyrhizobium sp. S23321]
Length = 206
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 90/150 (60%), Gaps = 7/150 (4%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R+DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDAIFGLEPRQDIIARCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR L LK ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSARVPQFRGGGRAFGPVVRSHATDLPKKVRALALKHALSAKAKDG 120
Query: 219 ------KVSLSVSLSLFLRPSFS-LSLKNT 241
K +L + + L FS L L N
Sbjct: 121 DLLVIDKAALEAAKTKALLGHFSGLGLTNA 150
>gi|319940059|ref|ZP_08014413.1| 50S ribosomal protein L4 [Streptococcus anginosus 1_2_62CV]
gi|319810773|gb|EFW07100.1| 50S ribosomal protein L4 [Streptococcus anginosus 1_2_62CV]
Length = 207
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG T+ GP PRS+A KL +KVRRL LK S + AE K SLS
Sbjct: 72 RARQGSIRSPQWRGGGTVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAEDKFVAVDSLSF 131
Query: 229 -------FLRPSFSLSLKNTDTHVHIV 248
F + +LSL DT V ++
Sbjct: 132 TAPKTAEFAKVLAALSL---DTKVLVI 155
>gi|121602068|ref|YP_988968.1| 50S ribosomal protein L4 [Bartonella bacilliformis KC583]
gi|121602137|ref|YP_988998.1| 50S ribosomal protein L4 [Bartonella bacilliformis KC583]
gi|421760771|ref|ZP_16197585.1| 50S ribosomal protein L4 [Bartonella bacilliformis INS]
gi|421760801|ref|ZP_16197615.1| 50S ribosomal protein L4 [Bartonella bacilliformis INS]
gi|120614245|gb|ABM44846.1| ribosomal protein L4 [Bartonella bacilliformis KC583]
gi|120614314|gb|ABM44915.1| ribosomal protein L4 [Bartonella bacilliformis KC583]
gi|411174539|gb|EKS44571.1| 50S ribosomal protein L4 [Bartonella bacilliformis INS]
gi|411174569|gb|EKS44601.1| 50S ribosomal protein L4 [Bartonella bacilliformis INS]
Length = 206
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DL+I + + G + ++ VF + R+DI+ RVVRWQLA+RQ+GTH + S++S T
Sbjct: 2 DLIIKTLD--GKKTGELSVSEHVFGLVPREDILQRVVRWQLARRQKGTHKVQGRSDISRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSHA L KK R LGL++ALSA+
Sbjct: 60 GAKMYKQKGTGRARHSSARAPQFRGGGKAHGPVIRSHAHGLPKKSRALGLRLALSAK 116
>gi|161511095|ref|NP_772039.2| 50S ribosomal protein L4 [Bradyrhizobium japonicum USDA 110]
gi|384218079|ref|YP_005609245.1| 50S ribosomal protein L4 [Bradyrhizobium japonicum USDA 6]
gi|46577249|sp|Q89J85.2|RL4_BRAJA RecName: Full=50S ribosomal protein L4
gi|354956978|dbj|BAL09657.1| 50S ribosomal protein L4 [Bradyrhizobium japonicum USDA 6]
Length = 206
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 90/150 (60%), Gaps = 7/150 (4%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R+DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDAIFGLEPRQDIIARCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR L LK ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSARVPQFRGGGRAFGPVVRSHATDLPKKVRALALKHALSAKAKDG 120
Query: 219 ------KVSLSVSLSLFLRPSFS-LSLKNT 241
K +L + + L FS L L N
Sbjct: 121 DLLVIDKAALEAAKTKALLGHFSGLGLTNA 150
>gi|384564363|ref|ZP_10011467.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
glauca K62]
gi|384520217|gb|EIE97412.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
glauca K62]
Length = 227
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 81/125 (64%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E +G + L ++FDV ++H+VV Q+A +QGTH TKT EV G G+KP+RQKGTG
Sbjct: 13 EAQGTVELPAEIFDVQANIPLMHQVVVAQMAAARQGTHDTKTRGEVRGGGRKPYRQKGTG 72
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQF GG T+HGP PR + + KK++ L+ ALS RA G+V + L
Sbjct: 73 RARQGSVRAPQFTGGGTVHGPTPRDYTQRTPKKMKAAALRGALSDRARAGQVHVITELVS 132
Query: 229 FLRPS 233
+PS
Sbjct: 133 GEKPS 137
>gi|289548390|ref|YP_003473378.1| 50S ribosomal protein L4/L1e [Thermocrinis albus DSM 14484]
gi|289182007|gb|ADC89251.1| ribosomal protein L4/L1e [Thermocrinis albus DSM 14484]
Length = 197
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 83/129 (64%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L D+F V ++K ++ V+WQLA R+QGTHSTKT +EV+ +G+K QKGTG ARHG
Sbjct: 6 LREDIFGVEVKKHVLWEAVKWQLAARRQGTHSTKTRAEVNYSGRKILPQKGTGNARHGER 65
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS 235
P F GG HGPKPR + L KKVR+L L++ALS++A EGKV L + + P
Sbjct: 66 GAPIFVGGGVAHGPKPRDYYYTLPKKVRKLALRMALSSKAKEGKVLLVDKVEIGEVPKTK 125
Query: 236 LSLKNTDTH 244
+++ TH
Sbjct: 126 KAVEFLKTH 134
>gi|449018858|dbj|BAM82260.1| mitochondrial ribosomal protein L4 precursor [Cyanidioschyzon
merolae strain 10D]
Length = 471
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E F ++ + D P R D+IHRVV +Q A +++GT TKT +EVSG+G+KPW QKGTG
Sbjct: 145 EPSCFASVSRALLDAPFRPDVIHRVVLYQRAAQRRGTAHTKTRAEVSGSGRKPWAQKGTG 204
Query: 169 RARHGTLRGPQFRGGTTMHGPKP-RSHAIKLNKKVRRLGLKIALSARAAEGKV 220
RAR G+LR PQFRGG HGP+ R A +L KKVR LGL AL+ R EG++
Sbjct: 205 RARAGSLRAPQFRGGGVAHGPRADRIWAQRLPKKVRWLGLASALTRRFQEGRL 257
>gi|374576228|ref|ZP_09649324.1| 50S ribosomal protein L4, bacterial/organelle [Bradyrhizobium sp.
WSM471]
gi|386402176|ref|ZP_10086954.1| 50S ribosomal protein L4, bacterial/organelle [Bradyrhizobium sp.
WSM1253]
gi|374424549|gb|EHR04082.1| 50S ribosomal protein L4, bacterial/organelle [Bradyrhizobium sp.
WSM471]
gi|385742802|gb|EIG62998.1| 50S ribosomal protein L4, bacterial/organelle [Bradyrhizobium sp.
WSM1253]
Length = 206
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 90/150 (60%), Gaps = 7/150 (4%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R+DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDTIFGLEPRQDIIARCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR L LK ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSARVPQFRGGGRAFGPVVRSHATDLPKKVRALALKHALSAKAKDG 120
Query: 219 ------KVSLSVSLSLFLRPSFS-LSLKNT 241
K +L + + L FS L L N
Sbjct: 121 DLIVIDKAALEAAKTKALLGHFSGLGLTNA 150
>gi|254470116|ref|ZP_05083520.1| ribosomal protein, L4/L1 family [Pseudovibrio sp. JE062]
gi|374332220|ref|YP_005082404.1| 50S ribosomal protein L4 [Pseudovibrio sp. FO-BEG1]
gi|211960427|gb|EEA95623.1| ribosomal protein, L4/L1 family [Pseudovibrio sp. JE062]
gi|359345008|gb|AEV38382.1| 50S ribosomal protein L4 [Pseudovibrio sp. FO-BEG1]
Length = 205
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 80/124 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V + G + ++ ++F + R D+I RVVRWQLAKRQ GTH + SEV+GT
Sbjct: 1 MELEVKTLGGKAAGSITVSDEIFGLEPRIDLIQRVVRWQLAKRQAGTHKSLGRSEVNGTT 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK RQKG+G ARHG + PQFRGG GP R HA L KKVR LGLK ALSA+AA G
Sbjct: 61 KKFVRQKGSGGARHGNRKAPQFRGGGKAFGPVVREHAHDLPKKVRALGLKHALSAKAASG 120
Query: 219 KVSL 222
+ +
Sbjct: 121 NLYI 124
>gi|415886278|ref|ZP_11548101.1| 50S ribosomal protein L4 [Bacillus methanolicus MGA3]
gi|387588931|gb|EIJ81252.1| 50S ribosomal protein L4 [Bacillus methanolicus MGA3]
Length = 207
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 80/123 (65%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L VF + K ++ V Q A +QGTH TK SEVSG
Sbjct: 1 MPKVALFNQNGSQVGEIELNDAVFGIEPNKHVLFEAVVMQRASLRQGTHKTKIRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLE 120
Query: 218 GKV 220
+
Sbjct: 121 ENI 123
>gi|253580620|ref|ZP_04857884.1| 50S ribosomal protein L4/L1 [Ruminococcus sp. 5_1_39B_FAA]
gi|251847991|gb|EES75957.1| 50S ribosomal protein L4/L1 [Ruminococcus sp. 5_1_39BFAA]
Length = 206
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 80/128 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G M L VF V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VTVYNMEGNEVGTMELNDAVFGVEVNEHLVHLAVVRQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G++R PQ+ GG + P PR + +K+NKK RR LK AL+++ + K+
Sbjct: 64 PWRQKGTGHARQGSIRAPQWTGGGVVFAPVPRDYEVKMNKKERRAALKSALTSKVQDNKL 123
Query: 221 SLSVSLSL 228
+ +L+L
Sbjct: 124 VVVDALTL 131
>gi|121534760|ref|ZP_01666581.1| ribosomal protein L4/L1e [Thermosinus carboxydivorans Nor1]
gi|121306780|gb|EAX47701.1| ribosomal protein L4/L1e [Thermosinus carboxydivorans Nor1]
Length = 208
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 80/120 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + G + L+ VF V + K ++H+ V QLA ++ GTH+TKT V G GKK
Sbjct: 4 VAVYDITGAQTGEIELSDSVFGVEVNKAVLHQAVVMQLANQRLGTHATKTRGMVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R P + GG T+ GP+PRS+AI + +K RRL LK ALSA+ G++
Sbjct: 64 PWRQKGTGRARAGSIRSPLWVGGGTVFGPQPRSYAISMPRKARRLALKSALSAKVQSGEM 123
>gi|239787564|emb|CAX84032.1| 50S ribosomal protein L4 [uncultured bacterium]
Length = 217
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 102 PVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
PV + N+ + L+ F +R D++ RVV +QLAKR+ GT STK EV G G KP
Sbjct: 5 PVVDAANQTSHTVNLSSHAFGCEVRGDLLTRVVHYQLAKRRLGTASTKRRGEVRGGGHKP 64
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSA-RAAEGKV 220
+RQKGTG AR GT+R PQ+R G + GP PR +++K+N+K R LGL+ ALSA R AE +
Sbjct: 65 YRQKGTGNARQGTIRAPQYRTGGVVFGPHPRDYSVKMNRKERALGLRTALSAKREAEELI 124
Query: 221 SLS 223
L+
Sbjct: 125 VLT 127
>gi|387928109|ref|ZP_10130787.1| 50S ribosomal protein L4 [Bacillus methanolicus PB1]
gi|387587695|gb|EIJ80017.1| 50S ribosomal protein L4 [Bacillus methanolicus PB1]
Length = 207
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 80/123 (65%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L VF + K ++ V Q A +QGTH TK SEVSG
Sbjct: 1 MPKVALFNQNGSQVGEIELNDAVFGIEPNKHVLFEAVVMQRASLRQGTHKTKIRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLE 120
Query: 218 GKV 220
+
Sbjct: 121 ENI 123
>gi|92117099|ref|YP_576828.1| 50S ribosomal protein L4 [Nitrobacter hamburgensis X14]
gi|122418094|sp|Q1QN29.1|RL4_NITHX RecName: Full=50S ribosomal protein L4
gi|91799993|gb|ABE62368.1| LSU ribosomal protein L4P [Nitrobacter hamburgensis X14]
Length = 206
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 78/120 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT G + L+ +F + RKD+I R V WQLAKRQ GTH TK +E+ TG
Sbjct: 1 MELNVTTLEGNAAGSVQLSDGIFGLEPRKDLIQRCVNWQLAKRQAGTHKTKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR L L+ ALSA+A +G
Sbjct: 61 KKMFKQKGTGNARHGSARVPQFRGGGRAFGPVVRSHAHDLPKKVRALALRHALSAKAKDG 120
>gi|335031215|ref|ZP_08524667.1| 50S ribosomal protein L4 [Streptococcus anginosus SK52 = DSM 20563]
gi|333770269|gb|EGL47318.1| 50S ribosomal protein L4 [Streptococcus anginosus SK52 = DSM 20563]
Length = 207
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 78/120 (65%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG T+ GP PRS+A KL +KVRRL LK S + AE K SLS
Sbjct: 72 RARQGSIRSPQWRGGGTVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAEDKFVAVDSLSF 131
>gi|289523368|ref|ZP_06440222.1| ribosomal protein L4/L1 family protein [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503060|gb|EFD24224.1| ribosomal protein L4/L1 family protein [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 208
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 80/122 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + G + LA DVF I +H+VV LA ++QGTHSTKT EV G G+K
Sbjct: 4 VDVIGIDGQKVGEVALADDVFAARIHVPAMHQVVVAYLAAQRQGTHSTKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQK TGRARHG++R P + G +HGPKPRS+ K+NKKV++L +K ALS + E K+
Sbjct: 64 PWRQKHTGRARHGSIRSPLWIKGGVVHGPKPRSYDQKVNKKVKQLAIKSALSLKVKENKL 123
Query: 221 SL 222
L
Sbjct: 124 IL 125
>gi|421490226|ref|ZP_15937600.1| 50S ribosomal protein L4 [Streptococcus anginosus SK1138]
gi|400373631|gb|EJP26559.1| 50S ribosomal protein L4 [Streptococcus anginosus SK1138]
Length = 207
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 78/120 (65%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG T+ GP PRS+A KL +KVRRL LK S + AE K SLS
Sbjct: 72 RARQGSIRSPQWRGGGTVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAEDKFVAVDSLSF 131
>gi|392429440|ref|YP_006470454.1| 50S ribosomal protein L4 [Streptococcus intermedius JTH08]
gi|419776742|ref|ZP_14302661.1| 50S ribosomal protein L4 [Streptococcus intermedius SK54]
gi|383845427|gb|EID82830.1| 50S ribosomal protein L4 [Streptococcus intermedius SK54]
gi|391758589|dbj|BAM24206.1| 50S ribosomal protein L4 [Streptococcus intermedius JTH08]
Length = 207
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 78/120 (65%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG T+ GP PRS+A KL +KVRRL LK S + AE K SLS
Sbjct: 72 RARQGSIRSPQWRGGGTVFGPTPRSYAYKLPQKVRRLALKSVYSEKIAENKFVAVDSLSF 131
>gi|340625722|ref|YP_004744174.1| putative 50S ribosomal protein L4 RPLD [Mycobacterium canettii CIPT
140010059]
gi|433625795|ref|YP_007259424.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140060008]
gi|433629786|ref|YP_007263414.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140070010]
gi|433633735|ref|YP_007267362.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140070017]
gi|433640825|ref|YP_007286584.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140070008]
gi|340003912|emb|CCC43046.1| putative 50S ribosomal protein L4 RPLD [Mycobacterium canettii CIPT
140010059]
gi|432153401|emb|CCK50623.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140060008]
gi|432157373|emb|CCK54651.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140070008]
gi|432161379|emb|CCK58721.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140070010]
gi|432165328|emb|CCK62803.1| Putative 50S ribosomal protein L4 RplD [Mycobacterium canettii CIPT
140070017]
Length = 223
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 78/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDVP ++H+VV Q A +QGTHSTKT EVSG G+KP+RQKGTGRAR
Sbjct: 22 GAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGGRKPYRQKGTGRAR 81
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGPKPR ++ + KK+ L+ ALS RA G++ L
Sbjct: 82 QGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVEGQN 141
Query: 232 PS 233
PS
Sbjct: 142 PS 143
>gi|269955436|ref|YP_003325225.1| 50S ribosomal protein L4/L1e [Xylanimonas cellulosilytica DSM
15894]
gi|269304117|gb|ACZ29667.1| ribosomal protein L4/L1e [Xylanimonas cellulosilytica DSM 15894]
Length = 232
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 86/142 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + + G L +VFDV +IH+VV Q A +QGTH+TKT EV G G
Sbjct: 4 LTVDVLDAQGKKAGQAELPAEVFDVVTNVPLIHQVVVAQRAAARQGTHATKTRGEVRGGG 63
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KP++QKGTGRAR G+ R PQF GG T+HGP+PRS+ + KK++ L+ ALS RA G
Sbjct: 64 RKPYKQKGTGRARQGSTRAPQFAGGGTVHGPQPRSYDQRTPKKMKAAALRGALSDRARAG 123
Query: 219 KVSLSVSLSLFLRPSFSLSLKN 240
+V + + PS +L+
Sbjct: 124 RVHVVTGFGIDGTPSTKTALQT 145
>gi|146340058|ref|YP_001205106.1| 50S ribosomal protein L4 [Bradyrhizobium sp. ORS 278]
gi|365885437|ref|ZP_09424438.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. ORS 375]
gi|365889689|ref|ZP_09428356.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. STM 3809]
gi|367474530|ref|ZP_09474031.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. ORS 285]
gi|166234639|sp|A4YSJ3.1|RL4_BRASO RecName: Full=50S ribosomal protein L4
gi|146192864|emb|CAL76869.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. ORS 278]
gi|365273167|emb|CCD86499.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. ORS 285]
gi|365285917|emb|CCD96969.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. ORS 375]
gi|365334554|emb|CCE00887.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. STM 3809]
Length = 206
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 78/120 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDAIFGLEPRADIIQRCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR L LK ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSARVPQFRGGGRAFGPVVRSHATDLPKKVRALALKHALSAKAKDG 120
>gi|256825885|ref|YP_003149845.1| 50S ribosomal protein L4P [Kytococcus sedentarius DSM 20547]
gi|256689278|gb|ACV07080.1| LSU ribosomal protein L4P [Kytococcus sedentarius DSM 20547]
Length = 223
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 76/109 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV +IH+VV QLA +QGTHSTKT +EV G G+KP+RQKGTGRAR
Sbjct: 15 GSVELPAEIFDVAANVPLIHQVVVAQLAAARQGTHSTKTRAEVRGGGRKPYRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
G+ R PQF GG +HGP+PR +A + KK++ L+ ALS RA G++
Sbjct: 75 QGSTRAPQFAGGGIVHGPQPRDYAQRTPKKMKAAALRGALSDRARHGRI 123
>gi|396585500|ref|ZP_10485909.1| 50S ribosomal protein L4 [Actinomyces sp. ICM47]
gi|395546701|gb|EJG14285.1| 50S ribosomal protein L4 [Actinomyces sp. ICM47]
Length = 214
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 89/144 (61%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ D + V + + G +VL G FDVP ++H+VV QLA +QGTH+TKT +V
Sbjct: 1 MADDRNVDVIDLEGKKAGTVVLPGSTFDVPTNIPLMHQVVVAQLAAARQGTHATKTRGDV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+G GKKP+RQKGTG AR G++R P F GG +HGP+PR + + KK+++ L+ ALS R
Sbjct: 61 AGGGKKPFRQKGTGNARQGSIRAPHFTGGGVVHGPQPRDYDQRTPKKMKQGALRSALSDR 120
Query: 215 AAEGKVSLSVSLSLFLRPSFSLSL 238
A ++ + +L +PS +L
Sbjct: 121 ARADRIHVVTALFEGEKPSTKAAL 144
>gi|404492292|ref|YP_006716398.1| 50S ribosomal protein L4 [Pelobacter carbinolicus DSM 2380]
gi|109893615|sp|Q3A6P6.1|RL4_PELCD RecName: Full=50S ribosomal protein L4
gi|77544399|gb|ABA87961.1| ribosomal protein L4 [Pelobacter carbinolicus DSM 2380]
Length = 206
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 76/107 (71%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L+ +VF+ +++ +IH +VR+QLA R+QGT + K S V+G GKKP+RQKGTG AR GT+
Sbjct: 19 LSDEVFNAEVKEYLIHDMVRYQLAARRQGTSAAKNRSAVAGGGKKPYRQKGTGNARQGTI 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
R P F GG GP PR + KLN+KV++ L+ ALSAR E +V++
Sbjct: 79 RAPHFVGGGAAFGPSPRDFSFKLNRKVKKAALRSALSARFKEERVAV 125
>gi|169823853|ref|YP_001691464.1| 50S ribosomal protein L4 [Finegoldia magna ATCC 29328]
gi|302379795|ref|ZP_07268279.1| 50S ribosomal protein L4 [Finegoldia magna ACS-171-V-Col3]
gi|303234753|ref|ZP_07321379.1| 50S ribosomal protein L4 [Finegoldia magna BVS033A4]
gi|417925299|ref|ZP_12568725.1| 50S ribosomal protein L4 [Finegoldia magna SY403409CC001050417]
gi|226730666|sp|B0RZU1.1|RL4_FINM2 RecName: Full=50S ribosomal protein L4
gi|167830658|dbj|BAG07574.1| 50S ribosomal protein L4 [Finegoldia magna ATCC 29328]
gi|302312383|gb|EFK94380.1| 50S ribosomal protein L4 [Finegoldia magna ACS-171-V-Col3]
gi|302494094|gb|EFL53874.1| 50S ribosomal protein L4 [Finegoldia magna BVS033A4]
gi|341592019|gb|EGS34915.1| 50S ribosomal protein L4 [Finegoldia magna SY403409CC001050417]
Length = 207
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 84/128 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E+ G + L +F V + + +++ VV+ QLA ++QGT S KT SEV G G+K
Sbjct: 4 VQILNQQGENVGELELNEAIFGVDVNEHVVYEVVKNQLANKRQGTQSAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+RGG + PKPR ++ + KKVRRL +K L+ + + ++
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFAPKPRDYSYAVPKKVRRLAIKSVLTEKVNDNEM 123
Query: 221 SLSVSLSL 228
+ L+L
Sbjct: 124 IVLDKLNL 131
>gi|331268414|ref|YP_004394906.1| 50S ribosomal protein L4 [Clostridium botulinum BKT015925]
gi|329124964|gb|AEB74909.1| ribosomal protein L4/L1e [Clostridium botulinum BKT015925]
Length = 206
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +N + G + LA VF V + D++H+VV QLA ++QGT S KT +EVSG
Sbjct: 1 MPTVDLYNREGQKVGDLQLAEAVFAVEVNADVLHQVVVAQLANKRQGTQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRAR G++R PQ+ G + PKPR + + + K +RR+ +K AL+++ E
Sbjct: 61 GKKPWRQKGTGRARQGSIRAPQWIHGGIVFAPKPREYRMAIPKSMRRVAMKSALTSKVNE 120
Query: 218 GKVSLSVSLSL 228
++ + +L L
Sbjct: 121 QELVVLENLEL 131
>gi|320094579|ref|ZP_08026345.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319978494|gb|EFW10071.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 216
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 87/138 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + + + L ++FDVP ++H+VV QLA +QGTHSTKT +VSG G+K
Sbjct: 9 VDVLDLEGKKAATVDLPAEIFDVPTNIPLMHQVVVAQLAAARQGTHSTKTRGQVSGGGRK 68
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTG AR G++R PQF GG +HGPKPR + + KK++R L+ ALS RA ++
Sbjct: 69 PFRQKGTGNARQGSIRAPQFTGGGVVHGPKPRDYEQRTPKKMKRGALRSALSDRARADRI 128
Query: 221 SLSVSLSLFLRPSFSLSL 238
+ +L +PS +L
Sbjct: 129 HVVTALFEGDKPSTKAAL 146
>gi|304321441|ref|YP_003855084.1| 50S ribosomal protein L4 [Parvularcula bermudensis HTCC2503]
gi|303300343|gb|ADM09942.1| 50S ribosomal protein L4 [Parvularcula bermudensis HTCC2503]
Length = 220
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I V G + L D+F + R DI+HR V WQ AKRQQGTH K EV+GT
Sbjct: 1 MQIDVLTLDASKAGDLDLRDDIFGLEPRADILHRYVVWQQAKRQQGTHKAKERGEVTGTT 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR--AA 216
KK RQKG+G ARHG + PQF GG HGP+ RSHA L KKVRRL L+ ALSA+ AA
Sbjct: 61 KKFVRQKGSGGARHGNRKAPQFVGGGKAHGPRVRSHAHDLPKKVRRLALRHALSAKQGAA 120
Query: 217 E 217
E
Sbjct: 121 E 121
>gi|220921900|ref|YP_002497201.1| 50S ribosomal protein L4 [Methylobacterium nodulans ORS 2060]
gi|254803744|sp|B8IS86.1|RL4_METNO RecName: Full=50S ribosomal protein L4
gi|219946506|gb|ACL56898.1| ribosomal protein L4/L1e [Methylobacterium nodulans ORS 2060]
Length = 206
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+T D G + L +F + R D++ R VRWQLAKRQ GTH KT SE+S T KK +
Sbjct: 5 ITTLDGADAGSVELDEAIFGLEPRADLLQRCVRWQLAKRQAGTHKVKTRSEISRTTKKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
+QKGTG ARHG PQFRGG GP RSHA L KKVR L L+ ALSA+A + SL
Sbjct: 65 KQKGTGNARHGAASAPQFRGGARAFGPVVRSHAHDLPKKVRALALRHALSAKAKD--ASL 122
Query: 223 SVSLSLFLRPSFSLSLKNT 241
V + L + +LK
Sbjct: 123 IVVDDVRLEDGKTKALKEC 141
>gi|257054471|ref|YP_003132303.1| 50S ribosomal protein L4P [Saccharomonospora viridis DSM 43017]
gi|256584343|gb|ACU95476.1| LSU ribosomal protein L4P [Saccharomonospora viridis DSM 43017]
Length = 228
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 81/125 (64%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E +G + L ++FDV ++H+VV Q+A +QGTH TKT EV G G+KP+RQKGTG
Sbjct: 13 EAQGTVELPSEIFDVQANIPLMHQVVVAQMAAARQGTHDTKTRGEVRGGGRKPYRQKGTG 72
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQF GG T+HGP PR + + KK++ L+ ALS RA G+V + L
Sbjct: 73 RARQGSIRAPQFVGGGTVHGPTPRDYTQRTPKKMKAAALRGALSDRARAGQVHIITELVT 132
Query: 229 FLRPS 233
+PS
Sbjct: 133 GEKPS 137
>gi|212704584|ref|ZP_03312712.1| hypothetical protein DESPIG_02646 [Desulfovibrio piger ATCC 29098]
gi|212671983|gb|EEB32466.1| 50S ribosomal protein L4 [Desulfovibrio piger ATCC 29098]
Length = 207
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G + L+ DVF+V R +I++ VVR Q+A ++ GTH KT + VSG G K
Sbjct: 4 VKVYDQNKQECGELTLSADVFEVEARPEILNLVVRAQMAAKRAGTHMAKTRAFVSGGGVK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
PW+QKGTGRAR G+ R P +RGG + GP+PR ++ K+N KVR L +K+ALS+R A
Sbjct: 64 PWKQKGTGRARSGSNRSPVWRGGAIVFGPQPRDYSFKVNSKVRALAMKMALSSRLA 119
>gi|375310806|ref|ZP_09776071.1| 50S ribosomal protein L4/L1e [Paenibacillus sp. Aloe-11]
gi|390456379|ref|ZP_10241907.1| 50S ribosomal protein L4 [Paenibacillus peoriae KCTC 3763]
gi|375077174|gb|EHS55417.1| 50S ribosomal protein L4/L1e [Paenibacillus sp. Aloe-11]
Length = 207
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 82/128 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N G + L VF + K ++H V QLA +QGTH K SEV G G+K
Sbjct: 4 VALLNISGSQVGEIELNDAVFGIEPNKHVLHDAVVMQLASLRQGTHKVKGRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PW+QKGTGRAR G++R PQ+ GG T+ GP PRS+A KL KKVRRL +K ALS++ E ++
Sbjct: 64 PWKQKGTGRARQGSIRAPQWVGGGTVFGPTPRSYAYKLPKKVRRLAIKSALSSKVIENEI 123
Query: 221 SLSVSLSL 228
+ +L+L
Sbjct: 124 IVLDALTL 131
>gi|238916266|ref|YP_002929783.1| 50S ribosomal protein L4 [Eubacterium eligens ATCC 27750]
gi|259491557|sp|C4Z2T1.1|RL4_EUBE2 RecName: Full=50S ribosomal protein L4
gi|238871626|gb|ACR71336.1| large subunit ribosomal protein L4 [Eubacterium eligens ATCC 27750]
Length = 206
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 78/120 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA +QGT S KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGSIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQSAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ+ GG + PKPR ++ K+NKK +R+ L ALS++ A+ K+
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPKPRDYSFKMNKKEKRIALLSALSSKVADNKI 123
>gi|288818163|ref|YP_003432511.1| ribosomal protein L4 [Hydrogenobacter thermophilus TK-6]
gi|384128927|ref|YP_005511540.1| 50S ribosomal protein L4 [Hydrogenobacter thermophilus TK-6]
gi|288787563|dbj|BAI69310.1| ribosomal protein L4 [Hydrogenobacter thermophilus TK-6]
gi|308751764|gb|ADO45247.1| ribosomal protein L4/L1e [Hydrogenobacter thermophilus TK-6]
Length = 199
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 81/117 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G M L DVF+V +++ I+ V++WQLA R+QGTHSTKT E+S +G+K QKGTG AR
Sbjct: 4 GDMELRDDVFNVEVKRHILWEVIKWQLACRRQGTHSTKTRGELSYSGRKLLPQKGTGNAR 63
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
HG F GG HGP+P + L KKVR+LGLK+ALS++A EGK+ L S+++
Sbjct: 64 HGDRGANIFVGGGVAHGPRPTDYYYSLPKKVRKLGLKMALSSKAQEGKMLLFDSINI 120
>gi|366052601|ref|ZP_09450323.1| 50S ribosomal protein L4 [Lactobacillus suebicus KCTC 3549]
Length = 208
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 86/132 (65%), Gaps = 4/132 (3%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L DVF + ++ I+ V Q A +QGTH+ K S VSG GKKPWRQKGTGRAR
Sbjct: 16 GTVDLNADVFGIEPNQNAIYDAVLRQRASLRQGTHAVKNRSAVSGGGKKPWRQKGTGRAR 75
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G++R PQ+RGG + GP PRS++ KL +KVR+L +K ALS + A+ K+ + S+S F +
Sbjct: 76 QGSIRSPQWRGGGIVFGPTPRSYSFKLPRKVRQLAIKSALSEKVADDKLVVVDSIS-FDK 134
Query: 232 P---SFSLSLKN 240
P F+ L N
Sbjct: 135 PKTKEFTAVLAN 146
>gi|326792606|ref|YP_004310427.1| 50S ribosomal protein L4/L1e [Clostridium lentocellum DSM 5427]
gi|326543370|gb|ADZ85229.1| ribosomal protein L4/L1e [Clostridium lentocellum DSM 5427]
Length = 207
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 81/128 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L +F V +++ ++H+ V LA R+QGT S KT +EV G G+K
Sbjct: 4 VAVLNMTGAQVGEVELNDSIFAVEVKEHLVHQAVVAHLANRRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PW+QKGTGRAR G++R Q+ GG PKPR+++IK+N K RRL LK AL++R E K
Sbjct: 64 PWKQKGTGRARQGSIRAVQWVGGGVAFAPKPRNYSIKVNAKERRLALKSALTSRVNESKF 123
Query: 221 SLSVSLSL 228
+ SL L
Sbjct: 124 IVLDSLEL 131
>gi|302523994|ref|ZP_07276336.1| ribosomal protein L4/L1 [Streptomyces sp. AA4]
gi|302432889|gb|EFL04705.1| ribosomal protein L4/L1 [Streptomyces sp. AA4]
Length = 229
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 79/122 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L G++FDV ++H+VV QLA +QGTH TKT EVSG GKKP+RQKGTGRAR
Sbjct: 15 GTVELPGEIFDVQANVALMHQVVVGQLAAARQGTHDTKTRGEVSGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGP PR + + KK++ L+ ALS RA G++ + L +
Sbjct: 75 QGSTRAPQFAGGGVVHGPTPRDYTQRTPKKMKAAALRGALSDRARAGQLHVVTELVTGEK 134
Query: 232 PS 233
PS
Sbjct: 135 PS 136
>gi|220928208|ref|YP_002505117.1| 50S ribosomal protein L4 [Clostridium cellulolyticum H10]
gi|254803726|sp|B8I7Y0.1|RL4_CLOCE RecName: Full=50S ribosomal protein L4
gi|219998536|gb|ACL75137.1| ribosomal protein L4/L1e [Clostridium cellulolyticum H10]
Length = 207
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 87/131 (66%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +N E G + L+ +VF + KD +H VV QLA R+QGT STKT SEV G
Sbjct: 1 MPKVDLYNMKGEVVGDIQLSDNVFGTDVNKDALHAVVVNQLANRRQGTQSTKTKSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRAR G++R Q+ G + GPKPRS+ L KKV+R+ +K AL+++ +
Sbjct: 61 GKKPWRQKGTGRARQGSIRSAQWVKGGIVLGPKPRSYRYTLPKKVKRIAMKSALTSKVSG 120
Query: 218 GKVSLSVSLSL 228
++ + +L+L
Sbjct: 121 NEIFVLDALAL 131
>gi|15607842|ref|NP_215216.1| 50S ribosomal protein L4 RplD [Mycobacterium tuberculosis H37Rv]
gi|15840109|ref|NP_335146.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis CDC1551]
gi|31791887|ref|NP_854380.1| 50S ribosomal protein L4 [Mycobacterium bovis AF2122/97]
gi|121636624|ref|YP_976847.1| 50S ribosomal protein L4 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660477|ref|YP_001282000.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis H37Ra]
gi|148821907|ref|YP_001286661.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis F11]
gi|167967944|ref|ZP_02550221.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis H37Ra]
gi|224989096|ref|YP_002643783.1| 50S ribosomal protein L4 [Mycobacterium bovis BCG str. Tokyo 172]
gi|253797645|ref|YP_003030646.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis KZN 1435]
gi|254231022|ref|ZP_04924349.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis C]
gi|254363649|ref|ZP_04979695.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis str.
Haarlem]
gi|254549663|ref|ZP_05140110.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289442103|ref|ZP_06431847.1| LSU ribosomal protein L4/L1 [Mycobacterium tuberculosis T46]
gi|289446262|ref|ZP_06436006.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis CPHL_A]
gi|289568646|ref|ZP_06448873.1| ribosomal protein L4 [Mycobacterium tuberculosis T17]
gi|289573310|ref|ZP_06453537.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis K85]
gi|289744426|ref|ZP_06503804.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis 02_1987]
gi|289749209|ref|ZP_06508587.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis T92]
gi|289752749|ref|ZP_06512127.1| ribosomal protein L4 [Mycobacterium tuberculosis EAS054]
gi|289756790|ref|ZP_06516168.1| ribosomal protein L4 [Mycobacterium tuberculosis T85]
gi|289760829|ref|ZP_06520207.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis GM 1503]
gi|294996197|ref|ZP_06801888.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis 210]
gi|297633201|ref|ZP_06950981.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis KZN 4207]
gi|297730181|ref|ZP_06959299.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis KZN R506]
gi|298524193|ref|ZP_07011602.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis 94_M4241A]
gi|306774813|ref|ZP_07413150.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu001]
gi|306781455|ref|ZP_07419792.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu002]
gi|306783354|ref|ZP_07421676.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu003]
gi|306787723|ref|ZP_07426045.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu004]
gi|306794490|ref|ZP_07432792.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu005]
gi|306796456|ref|ZP_07434758.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu006]
gi|306802316|ref|ZP_07438984.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu008]
gi|306806526|ref|ZP_07443194.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu007]
gi|306966723|ref|ZP_07479384.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu009]
gi|306970915|ref|ZP_07483576.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu010]
gi|307078645|ref|ZP_07487815.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu011]
gi|307083209|ref|ZP_07492322.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu012]
gi|313657508|ref|ZP_07814388.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis KZN V2475]
gi|339630771|ref|YP_004722413.1| 50S ribosomal protein L4 [Mycobacterium africanum GM041182]
gi|375294921|ref|YP_005099188.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis KZN 4207]
gi|378770458|ref|YP_005170191.1| 50S ribosomal protein L4 [Mycobacterium bovis BCG str. Mexico]
gi|383306603|ref|YP_005359414.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis RGTB327]
gi|385990177|ref|YP_005908475.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis CCDC5180]
gi|385993777|ref|YP_005912075.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis CCDC5079]
gi|385997481|ref|YP_005915779.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis CTRI-2]
gi|386003734|ref|YP_005922013.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis RGTB423]
gi|392385422|ref|YP_005307051.1| rplD [Mycobacterium tuberculosis UT205]
gi|392431131|ref|YP_006472175.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis KZN 605]
gi|397672511|ref|YP_006514046.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis H37Rv]
gi|422811642|ref|ZP_16860043.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis CDC1551A]
gi|424805800|ref|ZP_18231231.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis W-148]
gi|424946471|ref|ZP_18362167.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis NCGM2209]
gi|449062724|ref|YP_007429807.1| 50S ribosomal protein L4 [Mycobacterium bovis BCG str. Korea 1168P]
gi|46397667|sp|P60728.1|RL4_MYCBO RecName: Full=50S ribosomal protein L4
gi|46397668|sp|P60729.1|RL4_MYCTU RecName: Full=50S ribosomal protein L4
gi|166234687|sp|A1KGI3.1|RL4_MYCBP RecName: Full=50S ribosomal protein L4
gi|166234691|sp|A5U088.1|RL4_MYCTA RecName: Full=50S ribosomal protein L4
gi|254803746|sp|C1AL36.1|RL4_MYCBT RecName: Full=50S ribosomal protein L4
gi|13880259|gb|AAK44960.1| ribosomal protein L4 [Mycobacterium tuberculosis CDC1551]
gi|31617474|emb|CAD93584.1| PROBABLE 50S RIBOSOMAL PROTEIN L4 RPLD [Mycobacterium bovis
AF2122/97]
gi|121492271|emb|CAL70738.1| Probable 50S ribosomal protein L4 rplD [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124600081|gb|EAY59091.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis C]
gi|134149163|gb|EBA41208.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis str.
Haarlem]
gi|148504629|gb|ABQ72438.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis H37Ra]
gi|148720434|gb|ABR05059.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis F11]
gi|224772209|dbj|BAH25015.1| 50S ribosomal protein L4 [Mycobacterium bovis BCG str. Tokyo 172]
gi|253319148|gb|ACT23751.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis KZN 1435]
gi|289415022|gb|EFD12262.1| LSU ribosomal protein L4/L1 [Mycobacterium tuberculosis T46]
gi|289419220|gb|EFD16421.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis CPHL_A]
gi|289537741|gb|EFD42319.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis K85]
gi|289542400|gb|EFD46048.1| ribosomal protein L4 [Mycobacterium tuberculosis T17]
gi|289684954|gb|EFD52442.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis 02_1987]
gi|289689796|gb|EFD57225.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis T92]
gi|289693336|gb|EFD60765.1| ribosomal protein L4 [Mycobacterium tuberculosis EAS054]
gi|289708335|gb|EFD72351.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis GM 1503]
gi|289712354|gb|EFD76366.1| ribosomal protein L4 [Mycobacterium tuberculosis T85]
gi|298493987|gb|EFI29281.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis 94_M4241A]
gi|308216703|gb|EFO76102.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu001]
gi|308325755|gb|EFP14606.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu002]
gi|308331848|gb|EFP20699.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu003]
gi|308335635|gb|EFP24486.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu004]
gi|308337250|gb|EFP26101.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu005]
gi|308343116|gb|EFP31967.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu006]
gi|308347003|gb|EFP35854.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu007]
gi|308350982|gb|EFP39833.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu008]
gi|308355578|gb|EFP44429.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu009]
gi|308359536|gb|EFP48387.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu010]
gi|308363441|gb|EFP52292.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu011]
gi|308367079|gb|EFP55930.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis SUMu012]
gi|323720926|gb|EGB29992.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis CDC1551A]
gi|326905076|gb|EGE52009.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis W-148]
gi|328457426|gb|AEB02849.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis KZN 4207]
gi|339293731|gb|AEJ45842.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis CCDC5079]
gi|339297370|gb|AEJ49480.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis CCDC5180]
gi|339330127|emb|CCC25783.1| putative 50S ribosomal protein L4 RPLD [Mycobacterium africanum
GM041182]
gi|341600640|emb|CCC63310.1| probable 50S ribosomal protein L4 rplD [Mycobacterium bovis BCG
str. Moreau RDJ]
gi|344218527|gb|AEM99157.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis CTRI-2]
gi|356592779|gb|AET18008.1| 50S ribosomal protein L4 [Mycobacterium bovis BCG str. Mexico]
gi|358230986|dbj|GAA44478.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis NCGM2209]
gi|378543973|emb|CCE36245.1| rplD [Mycobacterium tuberculosis UT205]
gi|379026853|dbj|BAL64586.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis str. Erdman =
ATCC 35801]
gi|380720556|gb|AFE15665.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis RGTB327]
gi|380724222|gb|AFE12017.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis RGTB423]
gi|392052540|gb|AFM48098.1| 50S ribosomal protein L4 rplD [Mycobacterium tuberculosis KZN 605]
gi|395137416|gb|AFN48575.1| 50S ribosomal protein L4 [Mycobacterium tuberculosis H37Rv]
gi|440580166|emb|CCG10569.1| putative 50S RIBOSOMAL protein L4 RPLD [Mycobacterium tuberculosis
7199-99]
gi|444894192|emb|CCP43446.1| 50S ribosomal protein L4 RplD [Mycobacterium tuberculosis H37Rv]
gi|449031232|gb|AGE66659.1| 50S ribosomal protein L4 [Mycobacterium bovis BCG str. Korea 1168P]
Length = 223
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 78/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDVP ++H+VV Q A +QGTHSTKT EVSG G+KP+RQKGTGRAR
Sbjct: 22 GAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGGRKPYRQKGTGRAR 81
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGPKPR ++ + KK+ L+ ALS RA G++ L
Sbjct: 82 QGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAITELVEGQN 141
Query: 232 PS 233
PS
Sbjct: 142 PS 143
>gi|407982446|ref|ZP_11163122.1| 50S ribosomal protein L4 [Mycobacterium hassiacum DSM 44199]
gi|407375958|gb|EKF24898.1| 50S ribosomal protein L4 [Mycobacterium hassiacum DSM 44199]
Length = 211
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 80/123 (65%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G + L ++FDV ++H+VV QLA +QGTHSTKT EVSG G+KP+RQKGTGRA
Sbjct: 9 EGSVELPAELFDVEPNIPLMHQVVTAQLAAARQGTHSTKTRGEVSGGGRKPYRQKGTGRA 68
Query: 171 RHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFL 230
R G+ R PQF GG T+HGPKPR ++ + KK+ L+ ALS RA G++ L
Sbjct: 69 RQGSTRAPQFTGGGTVHGPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVEGQ 128
Query: 231 RPS 233
PS
Sbjct: 129 TPS 131
>gi|452994820|emb|CCQ93484.1| ribosomal protein L4 [Clostridium ultunense Esp]
Length = 207
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 81/128 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L DVF + + + +++ VV+ QLA +QGT S KT +EV G G+K
Sbjct: 4 VNVYNILGEQVGEIELNEDVFGIEVNQHVLYEVVKNQLANSRQGTQSVKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R P + GG PKPR + ++ KKV+RL +K ALS++ ++
Sbjct: 64 PWRQKGTGRARQGSIRAPHWVGGGVAFAPKPRDYGYRVPKKVKRLAMKSALSSKVLNNEI 123
Query: 221 SLSVSLSL 228
+ L+L
Sbjct: 124 IVLEELNL 131
>gi|365896256|ref|ZP_09434338.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. STM 3843]
gi|365422969|emb|CCE06880.1| 50S ribosomal subunit protein L4 [Bradyrhizobium sp. STM 3843]
Length = 206
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 79/120 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R+DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDAIFGLDPRQDIIARCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR L LK ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSARVPQFRGGGRAFGPVVRSHATDLPKKVRALALKHALSAKAKDG 120
>gi|291547983|emb|CBL21091.1| LSU ribosomal protein L4P [Ruminococcus sp. SR1/5]
Length = 206
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 79/128 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G M L VF V I + ++H V QLA +QGT KT SEV G G+K
Sbjct: 4 VTVYNMEGNEVGTMELNDAVFGVEINEHLVHLAVVRQLANNRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G++R PQ+ GG + P PR + +K+NKK RR LK AL+++ + K+
Sbjct: 64 PWRQKGTGHARQGSIRAPQWTGGGVVFAPVPRDYEVKMNKKERRAALKSALTSKVQDNKL 123
Query: 221 SLSVSLSL 228
+ SL+L
Sbjct: 124 VVVDSLAL 131
>gi|2113867|emb|CAA73673.1| rplD [Mycobacterium bovis BCG]
Length = 223
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 78/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDVP ++H+VV Q A +QGTHSTKT EVSG G+KP+RQKGTGRAR
Sbjct: 22 GAIELPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGGRKPYRQKGTGRAR 81
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGPKPR ++ + KK+ L+ ALS RA G++ L
Sbjct: 82 QGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAITELVEGQN 141
Query: 232 PS 233
PS
Sbjct: 142 PS 143
>gi|217976766|ref|YP_002360913.1| 50S ribosomal protein L4 [Methylocella silvestris BL2]
gi|254803745|sp|B8ELG2.1|RL4_METSB RecName: Full=50S ribosomal protein L4
gi|217502142|gb|ACK49551.1| ribosomal protein L4/L1e [Methylocella silvestris BL2]
Length = 206
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 82/122 (67%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I +T+ + G + L +F + R+D+I R+VR+QLAKR+ GTH TK +E++ TG
Sbjct: 1 MKIDITSLNGDSAGSIDLDDSIFGLEPRQDLIARMVRYQLAKRRAGTHKTKGRAEIARTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR L LK ALSA+A G
Sbjct: 61 KKLYKQKGTGSARHGSARVPQFRGGGRAFGPVVRSHAHDLPKKVRALALKHALSAKAQGG 120
Query: 219 KV 220
+
Sbjct: 121 GI 122
>gi|312622046|ref|YP_004023659.1| 50S ribosomal protein L4/L1e [Caldicellulosiruptor kronotskyensis
2002]
gi|312202513|gb|ADQ45840.1| ribosomal protein L4/L1e [Caldicellulosiruptor kronotskyensis 2002]
Length = 208
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 77/118 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N + G + L +F+VPI ++H+ V LA R+QGT + KT +EV G G+K
Sbjct: 4 VPVYNIEGQQIGEIELNDSIFNVPINNHVLHQAVVAHLANRRQGTFAAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
PWRQKGTGRAR G++R P +R G + KPR +I+L KKV+RL LK ALS++ E
Sbjct: 64 PWRQKGTGRARQGSIRAPTWRKGGVVFAKKPRDFSIELPKKVKRLALKCALSSKVKEN 121
>gi|308070974|ref|YP_003872579.1| 50S ribosomal protein L4 [Paenibacillus polymyxa E681]
gi|310644201|ref|YP_003948960.1| 50S ribosomal protein L4 [Paenibacillus polymyxa SC2]
gi|374320646|ref|YP_005073775.1| 50S ribosomal protein L4 [Paenibacillus terrae HPL-003]
gi|305860253|gb|ADM72041.1| 50S ribosomal protein L4 [Paenibacillus polymyxa E681]
gi|309249152|gb|ADO58719.1| 50S ribosomal protein L4 [Paenibacillus polymyxa SC2]
gi|357199655|gb|AET57552.1| 50S ribosomal protein L4 [Paenibacillus terrae HPL-003]
gi|392304897|emb|CCI71260.1| 50S ribosomal protein L4 BL4 [Paenibacillus polymyxa M1]
Length = 207
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN G + L VF + K ++H V QLA +QGTH K SEV G
Sbjct: 1 MPKVALFNISGSQVGEIELNDAVFGIEPNKHVLHDAVVMQLASLRQGTHKVKGRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPW+QKGTGRAR G++R PQ+ GG T+ GP PRS+A KL KKVRRL +K ALS++ E
Sbjct: 61 GRKPWKQKGTGRARQGSIRAPQWVGGGTVFGPTPRSYAYKLPKKVRRLAIKSALSSKVIE 120
Query: 218 GKVSLSVSLSL 228
++ + +L+L
Sbjct: 121 NEIIVLDALTL 131
>gi|210623189|ref|ZP_03293628.1| hypothetical protein CLOHIR_01578 [Clostridium hiranonis DSM 13275]
gi|210153726|gb|EEA84732.1| hypothetical protein CLOHIR_01578 [Clostridium hiranonis DSM 13275]
Length = 207
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 82/128 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N ++ G + L +F+V + + +++ V+ QLA R+QGT S KT +EV G G+K
Sbjct: 4 INVMNINGQNVGEIELCDSIFNVEVNEHVLYEAVKCQLANRRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PW+QKGTGRAR G+ R Q+ GG PKPRS+ L KKVRRL +K ALS++ ++
Sbjct: 64 PWKQKGTGRARQGSTRSVQWVGGGVAFAPKPRSYKYTLPKKVRRLAMKCALSSKVQNNEI 123
Query: 221 SLSVSLSL 228
+ +L++
Sbjct: 124 IVLDALTM 131
>gi|302871499|ref|YP_003840135.1| 50S ribosomal protein L4 [Caldicellulosiruptor obsidiansis OB47]
gi|312135495|ref|YP_004002833.1| 50S ribosomal protein L4/L1e [Caldicellulosiruptor owensensis OL]
gi|302574358|gb|ADL42149.1| ribosomal protein L4/L1e [Caldicellulosiruptor obsidiansis OB47]
gi|311775546|gb|ADQ05033.1| ribosomal protein L4/L1e [Caldicellulosiruptor owensensis OL]
Length = 208
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 76/118 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N + G + L +F+VPI ++H+ V LA R+QGT + KT +EV G G+K
Sbjct: 4 VPVYNIEGQQIGEIELNDSIFNVPINTHVLHQAVVAHLANRRQGTFAAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
PWRQKGTGRAR G++R P +R G + KPR +I L KKVRRL LK ALS++ E
Sbjct: 64 PWRQKGTGRARQGSIRAPTWRKGGVVFAKKPRDFSIDLPKKVRRLALKCALSSKVKEN 121
>gi|212637955|ref|YP_002314475.1| 50S ribosomal protein L4 [Anoxybacillus flavithermus WK1]
gi|226730612|sp|B7GJ68.1|RL4_ANOFW RecName: Full=50S ribosomal protein L4
gi|212559435|gb|ACJ32490.1| Ribosomal protein L4 [Anoxybacillus flavithermus WK1]
Length = 207
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 83/128 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E+ G + L VF + K ++ V Q A +QGTH TK +EVSG G+K
Sbjct: 4 VALYNQNGENIGEIELNDAVFGIEPNKHVLFEAVIMQRASLRQGTHKTKNRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K ALS++ E +
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLENSI 123
Query: 221 SLSVSLSL 228
+ +L+L
Sbjct: 124 VVLDNLTL 131
>gi|407797891|ref|ZP_11144806.1| 50S ribosomal protein L4 [Salimicrobium sp. MJ3]
gi|407017654|gb|EKE30411.1| 50S ribosomal protein L4 [Salimicrobium sp. MJ3]
Length = 207
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN+ G + L VF + ++H V Q A ++QGTH KT EVSG
Sbjct: 1 MPKVALFNQSGSKVGDLDLNDAVFGIEPNTHVLHETVLMQQASKRQGTHKVKTRGEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR GT+R PQ+ GG T+ GP PRS++ KL KKVRRL L+ A S++ E
Sbjct: 61 GRKPWRQKGTGRARQGTIRAPQWVGGGTVFGPTPRSYSYKLPKKVRRLALRSAYSSKVQE 120
Query: 218 GKVSLSVSLSL 228
+ LS+
Sbjct: 121 ENLYAVEELSM 131
>gi|146297284|ref|YP_001181055.1| 50S ribosomal protein L4 [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|166234648|sp|A4XLS9.1|RL4_CALS8 RecName: Full=50S ribosomal protein L4
gi|145410860|gb|ABP67864.1| ribosomal protein L4/L1e [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 208
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 76/118 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N + G + L +F+VPI ++H+ V LA R+QGT + KT +EV G G+K
Sbjct: 4 VPVYNIEGQQIGEIELNDSIFNVPINTHVLHQAVVAHLANRRQGTFAAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
PWRQKGTGRAR G++R P +R G + KPR +I L KKVRRL LK ALS++ E
Sbjct: 64 PWRQKGTGRARQGSIRAPTWRKGGVVFAKKPRDFSIDLPKKVRRLALKCALSSKVKEN 121
>gi|75675557|ref|YP_317978.1| 50S ribosomal protein L4 [Nitrobacter winogradskyi Nb-255]
gi|109893613|sp|Q3SSW5.1|RL4_NITWN RecName: Full=50S ribosomal protein L4
gi|74420427|gb|ABA04626.1| LSU ribosomal protein L4P [Nitrobacter winogradskyi Nb-255]
Length = 206
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT + G + L+ +F + RKD+I R V WQLAK Q GTH TK +E+ TG
Sbjct: 1 MELNVTTLEGKAAGSVHLSDGIFGLEPRKDLIQRCVNWQLAKSQAGTHKTKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR L L+ ALSA+A +G
Sbjct: 61 KKLFKQKGTGNARHGSARAPQFRGGGRAFGPVVRSHAHDLPKKVRALALRHALSAKAKDG 120
Query: 219 KVSLSVSLSL 228
+ + S+ L
Sbjct: 121 GLIVIDSVEL 130
>gi|302388087|ref|YP_003823909.1| 50S ribosomal protein L4 [Clostridium saccharolyticum WM1]
gi|302198715|gb|ADL06286.1| ribosomal protein L4/L1e [Clostridium saccharolyticum WM1]
Length = 206
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 76/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT +EVSG G+K
Sbjct: 4 VSVYNMEGKEVGTLELNDAVFGVDVNEHLVHMAVVSQLANKRQGTQKAKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PW+QKGTG AR G+ R PQ+ GG + P PR + I+LNKK RRL LK AL++R E K
Sbjct: 64 PWKQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYTIRLNKKERRLALKSALTSRVNENK 122
>gi|302853159|ref|XP_002958096.1| mitochondrial ribosomal protein L4 [Volvox carteri f. nagariensis]
gi|300256564|gb|EFJ40827.1| mitochondrial ribosomal protein L4 [Volvox carteri f. nagariensis]
Length = 357
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 78/117 (66%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V + + G + L G F+VP+R DI+HRVVR+ AK QQGTH K EVSG G+KP
Sbjct: 88 VYSMDEQPLGLVRLPGVAFNVPVRLDILHRVVRYLRAKWQQGTHKAKRRGEVSGGGRKPR 147
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
QK TGRAR G++R P ++GG H P PRSHA KL + VR LG++ A++A+ EG+
Sbjct: 148 PQKKTGRARQGSIRSPLWKGGGVSHAPLPRSHAHKLPRSVRLLGMRCAITAKIHEGR 204
>gi|441204845|ref|ZP_20972301.1| 50S ribosomal protein L4 [Mycobacterium smegmatis MKD8]
gi|440629311|gb|ELQ91101.1| 50S ribosomal protein L4 [Mycobacterium smegmatis MKD8]
Length = 209
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 79/122 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA ++QGTHSTKT EVSG GKKP+RQKGTGRAR
Sbjct: 10 GSVELPAELFDVEPNIALMHQVVTAQLAAKRQGTHSTKTRGEVSGGGKKPYRQKGTGRAR 69
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG T+HGPKPR ++ + KK+ L+ ALS RA ++ L
Sbjct: 70 QGSTRAPQFTGGGTVHGPKPRDYSQRTPKKMIAAALRGALSDRARNDRIHAVTELVEGQT 129
Query: 232 PS 233
PS
Sbjct: 130 PS 131
>gi|118470088|ref|YP_885820.1| 50S ribosomal protein L4 [Mycobacterium smegmatis str. MC2 155]
gi|399985821|ref|YP_006566169.1| 50S ribosomal protein L4 [Mycobacterium smegmatis str. MC2 155]
gi|166234688|sp|A0QSD2.1|RL4_MYCS2 RecName: Full=50S ribosomal protein L4
gi|118171375|gb|ABK72271.1| ribosomal protein L4/L1 family protein [Mycobacterium smegmatis
str. MC2 155]
gi|399230381|gb|AFP37874.1| 50S ribosomal protein L4 [Mycobacterium smegmatis str. MC2 155]
Length = 215
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 79/122 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA ++QGTHSTKT EVSG GKKP+RQKGTGRAR
Sbjct: 16 GSVELPAELFDVEPNIALMHQVVTAQLAAKRQGTHSTKTRGEVSGGGKKPYRQKGTGRAR 75
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG T+HGPKPR ++ + KK+ L+ ALS RA ++ L
Sbjct: 76 QGSTRAPQFTGGGTVHGPKPRDYSQRTPKKMIAAALRGALSDRARNDRIHAVTELVEGQT 135
Query: 232 PS 233
PS
Sbjct: 136 PS 137
>gi|456356077|dbj|BAM90522.1| 50S ribosomal protein L4 [Agromonas oligotrophica S58]
Length = 206
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 78/120 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT ++ G + L+ +F + R DII R V+WQL KRQ GTH K +E+ TG
Sbjct: 1 MELKVTTLEGKEAGSVQLSDAIFGLEPRADIIQRCVQWQLNKRQAGTHKAKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR + LK ALSA+A +G
Sbjct: 61 KKMYKQKGTGGARHGSARVPQFRGGGRAFGPVVRSHATDLPKKVRAMALKHALSAKAKDG 120
>gi|375091979|ref|ZP_09738266.1| 50S ribosomal protein L4 [Helcococcus kunzii ATCC 51366]
gi|374562197|gb|EHR33529.1| 50S ribosomal protein L4 [Helcococcus kunzii ATCC 51366]
Length = 207
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 81/117 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F I + +++ VV+ QLA ++QGT S KT +EV G GKKPWRQKGTGRAR
Sbjct: 15 GNIDLPESLFGSEINEHVVYEVVKNQLANKRQGTQSAKTRAEVRGGGKKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
G++R PQ+RGG T+ PKPR+++ + KKVRRL LK L+++ E ++ + L+L
Sbjct: 75 QGSIRSPQWRGGGTVFAPKPRNYSYTVPKKVRRLALKSLLTSKVVEEEIIVLNELNL 131
>gi|395787644|ref|ZP_10467236.1| 50S ribosomal protein L4 [Bartonella birtlesii LL-WM9]
gi|395410266|gb|EJF76821.1| 50S ribosomal protein L4 [Bartonella birtlesii LL-WM9]
Length = 206
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +F + R+DI+ RV+RWQLA+RQQGTH ++ S+VS T
Sbjct: 2 DLVIKTLD--GGEAGKLKVSKAIFGLVPREDILQRVIRWQLARRQQGTHQSQGRSDVSRT 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R QFRGG HGP R HA L KKVR LGL++ALSA+
Sbjct: 60 GAKMFKQKGTGRARHSSARVSQFRGGGKAHGPVARGHAHGLPKKVRALGLRLALSAK 116
>gi|451943234|ref|YP_007463870.1| 50S ribosomal protein L4 [Corynebacterium halotolerans YIM 70093 =
DSM 44683]
gi|451902621|gb|AGF71508.1| 50S ribosomal protein L4 [Corynebacterium halotolerans YIM 70093 =
DSM 44683]
Length = 217
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 79/122 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD + ++H+VV QLA +QGTHSTKT SEVSG GKKP+RQKGTGRAR
Sbjct: 17 GQVDLPAEIFDREVSIALMHQVVNAQLAAARQGTHSTKTRSEVSGGGKKPFRQKGTGRAR 76
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G++R P F GG HGPKPR +A + KK++ L ALS RA G++ + L
Sbjct: 77 QGSIRAPHFAGGGISHGPKPRDYAQRTPKKMKSAALCGALSDRARNGRIHVITELVPGQD 136
Query: 232 PS 233
PS
Sbjct: 137 PS 138
>gi|295694838|ref|YP_003588076.1| 50S ribosomal protein L4 [Kyrpidia tusciae DSM 2912]
gi|295410440|gb|ADG04932.1| ribosomal protein L4/L1e [Kyrpidia tusciae DSM 2912]
Length = 207
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 93/151 (61%), Gaps = 8/151 (5%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L+ VF V ++ ++H+ V QLA +QGT +TK + V G G+K
Sbjct: 4 VAVYNAAGEQVGELELSEKVFGVDVKPAVLHQAVVAQLANARQGTRATKNRALVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+ GG T+ GP+PR +++L KK+RRL ++ ALS++ +EG
Sbjct: 64 PWRQKGTGRARQGSIRAPQWVGGGTVFGPQPRDFSMRLPKKLRRLAIRGALSSKVSEG-- 121
Query: 221 SLSVSLSLFLRPSFSLSLKNTDTHVHIVSSI 251
SL + S + T + I+S++
Sbjct: 122 ------SLIVLDSLQIEAPKTKEMIRILSNL 146
>gi|302869971|ref|YP_003838608.1| 50S ribosomal protein L4/L1e [Micromonospora aurantiaca ATCC 27029]
gi|315501432|ref|YP_004080319.1| 50S ribosomal protein L4/l1e [Micromonospora sp. L5]
gi|302572830|gb|ADL49032.1| ribosomal protein L4/L1e [Micromonospora aurantiaca ATCC 27029]
gi|315408051|gb|ADU06168.1| ribosomal protein L4/L1e [Micromonospora sp. L5]
Length = 221
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L D+FD ++H+VV QLA +QGTH TKT EVSG GKK
Sbjct: 4 VDVINVEGAKSGSVELPADIFDAQANIALMHQVVVAQLAAARQGTHKTKTRGEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P++QKGTGRAR G+ R PQF GG +HGP PR ++ + KK++ L+ ALS RA G+V
Sbjct: 64 PYKQKGTGRARQGSTRAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRGALSDRARAGQV 123
Query: 221 SLSVSLSLFLRPSFSLSL 238
+ + +PS +L
Sbjct: 124 HVVEAFVSGEKPSTKAAL 141
>gi|403382869|ref|ZP_10924926.1| 50S ribosomal protein L4 [Paenibacillus sp. JC66]
Length = 207
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 81/128 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + L+ VF + K ++H V Q A +QGTH K SEV G G+K
Sbjct: 4 VALYNISGEQVGELELSEAVFGIEPNKHVLHDAVVMQQASLRQGTHKVKGRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PW+QKGTGRAR G++R PQ++GG + GP PRS+A KL KKVRRL +K ALS++ E ++
Sbjct: 64 PWKQKGTGRARQGSIRSPQWKGGGIVFGPTPRSYAYKLPKKVRRLAIKSALSSKVIENEI 123
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 124 IVLDQLQL 131
>gi|336436040|ref|ZP_08615753.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 1_4_56FAA]
gi|336008080|gb|EGN38099.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 1_4_56FAA]
Length = 206
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 76/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGTIDLNDAVFGVEVNEHLVHMAVVSQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PR ++ K+NKK +R LK ALS+R AE K
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPVPRDYSFKMNKKEKRAALKSALSSRVAENK 122
>gi|56961933|ref|YP_173655.1| 50S ribosomal protein L4 [Bacillus clausii KSM-K16]
gi|81601105|sp|Q5WLR1.1|RL4_BACSK RecName: Full=50S ribosomal protein L4
gi|56908167|dbj|BAD62694.1| 50S ribosomal protein L4 [Bacillus clausii KSM-K16]
Length = 207
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + FN+ G + LA +VF V + ++H V Q A +QGTH TK SEV G
Sbjct: 1 MPKVSLFNQTGSQVGEIELADNVFGVEPNESVLHDAVVMQQASLRQGTHKTKGRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+ GG + GP PRS++ KL KKVRRL +K ALS++ +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWVGGGVVFGPTPRSYSYKLPKKVRRLAIKSALSSKVKD 120
Query: 218 GKVSLSVSLSL 228
++ + L L
Sbjct: 121 SELVVLDDLKL 131
>gi|30018381|ref|NP_830012.1| 50S ribosomal protein L4 [Bacillus cereus ATCC 14579]
gi|30260302|ref|NP_842679.1| 50S ribosomal protein L4 [Bacillus anthracis str. Ames]
gi|42779192|ref|NP_976439.1| 50S ribosomal protein L4 [Bacillus cereus ATCC 10987]
gi|47525367|ref|YP_016716.1| 50S ribosomal protein L4 [Bacillus anthracis str. 'Ames Ancestor']
gi|49183145|ref|YP_026397.1| 50S ribosomal protein L4 [Bacillus anthracis str. Sterne]
gi|49476718|ref|YP_034463.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52145106|ref|YP_081722.1| 50S ribosomal protein L4 [Bacillus cereus E33L]
gi|118475880|ref|YP_893031.1| 50S ribosomal protein L4 [Bacillus thuringiensis str. Al Hakam]
gi|206972278|ref|ZP_03233225.1| 50S ribosomal protein L4 [Bacillus cereus AH1134]
gi|217957686|ref|YP_002336230.1| 50S ribosomal protein L4 [Bacillus cereus AH187]
gi|218234634|ref|YP_002364960.1| 50S ribosomal protein L4 [Bacillus cereus B4264]
gi|218895246|ref|YP_002443657.1| 50S ribosomal protein L4 [Bacillus cereus G9842]
gi|218901315|ref|YP_002449149.1| 50S ribosomal protein L4 [Bacillus cereus AH820]
gi|222093881|ref|YP_002527931.1| 50S ribosomal protein L4 [Bacillus cereus Q1]
gi|225862163|ref|YP_002747541.1| 50S ribosomal protein L4 [Bacillus cereus 03BB102]
gi|227812784|ref|YP_002812793.1| 50S ribosomal protein L4 [Bacillus anthracis str. CDC 684]
gi|228898864|ref|ZP_04063146.1| 50S ribosomal protein L4 [Bacillus thuringiensis IBL 4222]
gi|228905908|ref|ZP_04069805.1| 50S ribosomal protein L4 [Bacillus thuringiensis IBL 200]
gi|228912850|ref|ZP_04076497.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228919061|ref|ZP_04082440.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228925364|ref|ZP_04088460.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931613|ref|ZP_04094519.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228937414|ref|ZP_04100060.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228943917|ref|ZP_04106302.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228950659|ref|ZP_04112793.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228956552|ref|ZP_04118348.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228963211|ref|ZP_04124380.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228970300|ref|ZP_04130959.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976870|ref|ZP_04137282.1| 50S ribosomal protein L4 [Bacillus thuringiensis Bt407]
gi|228983366|ref|ZP_04143579.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229027959|ref|ZP_04184112.1| 50S ribosomal protein L4 [Bacillus cereus AH1271]
gi|229041016|ref|ZP_04189779.1| 50S ribosomal protein L4 [Bacillus cereus AH676]
gi|229067876|ref|ZP_04201193.1| 50S ribosomal protein L4 [Bacillus cereus F65185]
gi|229074172|ref|ZP_04207218.1| 50S ribosomal protein L4 [Bacillus cereus Rock4-18]
gi|229089242|ref|ZP_04220523.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-42]
gi|229094833|ref|ZP_04225838.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-29]
gi|229100910|ref|ZP_04231714.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-28]
gi|229107797|ref|ZP_04237433.1| 50S ribosomal protein L4 [Bacillus cereus Rock1-15]
gi|229113787|ref|ZP_04243222.1| 50S ribosomal protein L4 [Bacillus cereus Rock1-3]
gi|229119773|ref|ZP_04249034.1| 50S ribosomal protein L4 [Bacillus cereus 95/8201]
gi|229125628|ref|ZP_04254660.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-Cer4]
gi|229136957|ref|ZP_04265584.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-ST26]
gi|229142917|ref|ZP_04271358.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-ST24]
gi|229148520|ref|ZP_04276776.1| 50S ribosomal protein L4 [Bacillus cereus m1550]
gi|229153889|ref|ZP_04282019.1| 50S ribosomal protein L4 [Bacillus cereus ATCC 4342]
gi|229159284|ref|ZP_04287308.1| 50S ribosomal protein L4 [Bacillus cereus R309803]
gi|229170962|ref|ZP_04298563.1| 50S ribosomal protein L4 [Bacillus cereus MM3]
gi|229176711|ref|ZP_04304115.1| 50S ribosomal protein L4 [Bacillus cereus 172560W]
gi|229182505|ref|ZP_04309756.1| 50S ribosomal protein L4 [Bacillus cereus BGSC 6E1]
gi|229188396|ref|ZP_04315444.1| 50S ribosomal protein L4 [Bacillus cereus ATCC 10876]
gi|229194501|ref|ZP_04321304.1| 50S ribosomal protein L4 [Bacillus cereus m1293]
gi|229602888|ref|YP_002864762.1| 50S ribosomal protein L4 [Bacillus anthracis str. A0248]
gi|254684385|ref|ZP_05148245.1| 50S ribosomal protein L4 [Bacillus anthracis str. CNEVA-9066]
gi|254720833|ref|ZP_05182625.1| 50S ribosomal protein L4 [Bacillus anthracis str. A1055]
gi|254733588|ref|ZP_05191308.1| 50S ribosomal protein L4 [Bacillus anthracis str. Western North
America USA6153]
gi|254739508|ref|ZP_05197205.1| 50S ribosomal protein L4 [Bacillus anthracis str. Kruger B]
gi|254751227|ref|ZP_05203265.1| 50S ribosomal protein L4 [Bacillus anthracis str. Vollum]
gi|254756766|ref|ZP_05208795.1| 50S ribosomal protein L4 [Bacillus anthracis str. Australia 94]
gi|296500945|ref|YP_003662645.1| 50S ribosomal protein L4 [Bacillus thuringiensis BMB171]
gi|300119577|ref|ZP_07057121.1| 50S ribosomal protein L4 [Bacillus cereus SJ1]
gi|301051848|ref|YP_003790059.1| 50S ribosomal protein L4 [Bacillus cereus biovar anthracis str. CI]
gi|365164085|ref|ZP_09360171.1| 50S ribosomal protein L4 [Bacillus sp. 7_6_55CFAA_CT2]
gi|375282209|ref|YP_005102644.1| 50S ribosomal protein L4 [Bacillus cereus NC7401]
gi|376264140|ref|YP_005116852.1| 50S ribosomal protein L4 [Bacillus cereus F837/76]
gi|384178018|ref|YP_005563780.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|384184197|ref|YP_005570093.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar chinensis
CT-43]
gi|386733977|ref|YP_006207158.1| 50S ribosomal protein L4 [Bacillus anthracis str. H9401]
gi|402554301|ref|YP_006595572.1| 50S ribosomal protein L4 [Bacillus cereus FRI-35]
gi|402562796|ref|YP_006605520.1| 50S ribosomal protein L4 [Bacillus thuringiensis HD-771]
gi|407708059|ref|YP_006831644.1| glycosyltransferase [Bacillus thuringiensis MC28]
gi|410672482|ref|YP_006924853.1| 50S ribosomal protein L4 [Bacillus thuringiensis Bt407]
gi|421510439|ref|ZP_15957332.1| 50S ribosomal protein L4 [Bacillus anthracis str. UR-1]
gi|421640527|ref|ZP_16081109.1| 50S ribosomal protein L4 [Bacillus anthracis str. BF1]
gi|423357598|ref|ZP_17335193.1| 50S ribosomal protein L4 [Bacillus cereus IS075]
gi|423364465|ref|ZP_17341955.1| 50S ribosomal protein L4 [Bacillus cereus VD022]
gi|423376297|ref|ZP_17353611.1| 50S ribosomal protein L4 [Bacillus cereus AND1407]
gi|423381842|ref|ZP_17359125.1| 50S ribosomal protein L4 [Bacillus cereus BAG1O-2]
gi|423387403|ref|ZP_17364657.1| 50S ribosomal protein L4 [Bacillus cereus BAG1X1-2]
gi|423405165|ref|ZP_17382338.1| 50S ribosomal protein L4 [Bacillus cereus BAG2X1-2]
gi|423415989|ref|ZP_17393109.1| 50S ribosomal protein L4 [Bacillus cereus BAG3O-2]
gi|423422344|ref|ZP_17399375.1| 50S ribosomal protein L4 [Bacillus cereus BAG3X2-2]
gi|423428217|ref|ZP_17405221.1| 50S ribosomal protein L4 [Bacillus cereus BAG4O-1]
gi|423439434|ref|ZP_17416372.1| 50S ribosomal protein L4 [Bacillus cereus BAG4X12-1]
gi|423439711|ref|ZP_17416617.1| 50S ribosomal protein L4 [Bacillus cereus BAG4X2-1]
gi|423450132|ref|ZP_17427010.1| 50S ribosomal protein L4 [Bacillus cereus BAG5O-1]
gi|423462615|ref|ZP_17439409.1| 50S ribosomal protein L4 [Bacillus cereus BAG5X2-1]
gi|423467968|ref|ZP_17444736.1| 50S ribosomal protein L4 [Bacillus cereus BAG6O-1]
gi|423480008|ref|ZP_17456722.1| 50S ribosomal protein L4 [Bacillus cereus BAG6X1-1]
gi|423507863|ref|ZP_17484430.1| 50S ribosomal protein L4 [Bacillus cereus HD73]
gi|423526591|ref|ZP_17503036.1| 50S ribosomal protein L4 [Bacillus cereus HuB1-1]
gi|423537368|ref|ZP_17513786.1| 50S ribosomal protein L4 [Bacillus cereus HuB2-9]
gi|423543096|ref|ZP_17519484.1| 50S ribosomal protein L4 [Bacillus cereus HuB4-10]
gi|423543598|ref|ZP_17519956.1| 50S ribosomal protein L4 [Bacillus cereus HuB5-5]
gi|423553955|ref|ZP_17530282.1| 50S ribosomal protein L4 [Bacillus cereus ISP3191]
gi|423565531|ref|ZP_17541807.1| 50S ribosomal protein L4 [Bacillus cereus MSX-A1]
gi|423572102|ref|ZP_17548316.1| 50S ribosomal protein L4 [Bacillus cereus MSX-A12]
gi|423578037|ref|ZP_17554156.1| 50S ribosomal protein L4 [Bacillus cereus MSX-D12]
gi|423578518|ref|ZP_17554629.1| 50S ribosomal protein L4 [Bacillus cereus VD014]
gi|423590602|ref|ZP_17566664.1| 50S ribosomal protein L4 [Bacillus cereus VD045]
gi|423608064|ref|ZP_17583957.1| 50S ribosomal protein L4 [Bacillus cereus VD102]
gi|423620281|ref|ZP_17596112.1| 50S ribosomal protein L4 [Bacillus cereus VD115]
gi|423626947|ref|ZP_17602722.1| 50S ribosomal protein L4 [Bacillus cereus VD148]
gi|423632020|ref|ZP_17607766.1| 50S ribosomal protein L4 [Bacillus cereus VD154]
gi|423638114|ref|ZP_17613766.1| 50S ribosomal protein L4 [Bacillus cereus VD156]
gi|423645070|ref|ZP_17620686.1| 50S ribosomal protein L4 [Bacillus cereus VD166]
gi|423646246|ref|ZP_17621816.1| 50S ribosomal protein L4 [Bacillus cereus VD169]
gi|423653045|ref|ZP_17628344.1| 50S ribosomal protein L4 [Bacillus cereus VD200]
gi|434378756|ref|YP_006613400.1| 50S ribosomal protein L4 [Bacillus thuringiensis HD-789]
gi|449086778|ref|YP_007419219.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|452196489|ref|YP_007476570.1| LSU ribosomal protein L4p (L1e) [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|46576767|sp|Q81J41.1|RL4_BACCR RecName: Full=50S ribosomal protein L4
gi|46576769|sp|Q81VS9.1|RL4_BACAN RecName: Full=50S ribosomal protein L4
gi|81570005|sp|Q73F95.1|RL4_BACC1 RecName: Full=50S ribosomal protein L4
gi|81614034|sp|Q6HPQ7.1|RL4_BACHK RecName: Full=50S ribosomal protein L4
gi|81689839|sp|Q63H89.1|RL4_BACCZ RecName: Full=50S ribosomal protein L4
gi|166234634|sp|A0R8I1.1|RL4_BACAH RecName: Full=50S ribosomal protein L4
gi|226730615|sp|B7JKC0.1|RL4_BACC0 RecName: Full=50S ribosomal protein L4
gi|226730616|sp|B7IT20.1|RL4_BACC2 RecName: Full=50S ribosomal protein L4
gi|226730617|sp|B7HJ49.1|RL4_BACC4 RecName: Full=50S ribosomal protein L4
gi|226730618|sp|B7HQU5.1|RL4_BACC7 RecName: Full=50S ribosomal protein L4
gi|254803712|sp|C3P9Q6.1|RL4_BACAA RecName: Full=50S ribosomal protein L4
gi|254803713|sp|C3LJ83.1|RL4_BACAC RecName: Full=50S ribosomal protein L4
gi|254803714|sp|C1ET40.1|RL4_BACC3 RecName: Full=50S ribosomal protein L4
gi|254803715|sp|B9IZJ5.1|RL4_BACCQ RecName: Full=50S ribosomal protein L4
gi|29893921|gb|AAP07213.1| LSU ribosomal protein L1E/L4P [Bacillus cereus ATCC 14579]
gi|30253623|gb|AAP24165.1| 50S ribosomal protein L4 [Bacillus anthracis str. Ames]
gi|42735107|gb|AAS39047.1| ribosomal protein L4 [Bacillus cereus ATCC 10987]
gi|47500515|gb|AAT29191.1| ribosomal protein L4 [Bacillus anthracis str. 'Ames Ancestor']
gi|49177072|gb|AAT52448.1| ribosomal protein L4 [Bacillus anthracis str. Sterne]
gi|49328274|gb|AAT58920.1| ribosomal protein L4 (50S ribosomal protein L4) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51978575|gb|AAU20125.1| ribosomal protein L4 (50S ribosomal protein L4) [Bacillus cereus
E33L]
gi|118415105|gb|ABK83524.1| LSU ribosomal protein L4P [Bacillus thuringiensis str. Al Hakam]
gi|206732852|gb|EDZ50027.1| 50S ribosomal protein L4 [Bacillus cereus AH1134]
gi|217062939|gb|ACJ77189.1| ribosomal protein L4 [Bacillus cereus AH187]
gi|218162591|gb|ACK62583.1| ribosomal protein L4 [Bacillus cereus B4264]
gi|218538801|gb|ACK91199.1| ribosomal protein L4 [Bacillus cereus AH820]
gi|218543914|gb|ACK96308.1| ribosomal protein L4 [Bacillus cereus G9842]
gi|221237929|gb|ACM10639.1| ribosomal protein L4 (50S ribosomal protein L4) [Bacillus cereus
Q1]
gi|225787946|gb|ACO28163.1| 50S ribosomal protein L4 [Bacillus cereus 03BB102]
gi|227006772|gb|ACP16515.1| 50S ribosomal protein L4 [Bacillus anthracis str. CDC 684]
gi|228588967|gb|EEK46982.1| 50S ribosomal protein L4 [Bacillus cereus m1293]
gi|228595070|gb|EEK52841.1| 50S ribosomal protein L4 [Bacillus cereus ATCC 10876]
gi|228600960|gb|EEK58529.1| 50S ribosomal protein L4 [Bacillus cereus BGSC 6E1]
gi|228606754|gb|EEK64171.1| 50S ribosomal protein L4 [Bacillus cereus 172560W]
gi|228612502|gb|EEK69723.1| 50S ribosomal protein L4 [Bacillus cereus MM3]
gi|228624176|gb|EEK80978.1| 50S ribosomal protein L4 [Bacillus cereus R309803]
gi|228629570|gb|EEK86267.1| 50S ribosomal protein L4 [Bacillus cereus ATCC 4342]
gi|228634936|gb|EEK91509.1| 50S ribosomal protein L4 [Bacillus cereus m1550]
gi|228640538|gb|EEK96927.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-ST24]
gi|228646495|gb|EEL02702.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-ST26]
gi|228657820|gb|EEL13626.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-Cer4]
gi|228663674|gb|EEL19253.1| 50S ribosomal protein L4 [Bacillus cereus 95/8201]
gi|228669658|gb|EEL25065.1| 50S ribosomal protein L4 [Bacillus cereus Rock1-3]
gi|228675646|gb|EEL30854.1| 50S ribosomal protein L4 [Bacillus cereus Rock1-15]
gi|228682489|gb|EEL36562.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-28]
gi|228688576|gb|EEL42449.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-29]
gi|228694081|gb|EEL47763.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-42]
gi|228708942|gb|EEL61069.1| 50S ribosomal protein L4 [Bacillus cereus Rock4-18]
gi|228715235|gb|EEL67094.1| 50S ribosomal protein L4 [Bacillus cereus F65185]
gi|228727313|gb|EEL78507.1| 50S ribosomal protein L4 [Bacillus cereus AH676]
gi|228733347|gb|EEL84176.1| 50S ribosomal protein L4 [Bacillus cereus AH1271]
gi|228776356|gb|EEM24709.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228782840|gb|EEM31006.1| 50S ribosomal protein L4 [Bacillus thuringiensis Bt407]
gi|228789409|gb|EEM37329.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228796469|gb|EEM43908.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228803117|gb|EEM49939.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228809010|gb|EEM55495.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228815750|gb|EEM61986.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228822247|gb|EEM68229.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228828041|gb|EEM73769.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834286|gb|EEM79827.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228840586|gb|EEM85848.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228846786|gb|EEM91791.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228853723|gb|EEM98483.1| 50S ribosomal protein L4 [Bacillus thuringiensis IBL 200]
gi|228860764|gb|EEN05142.1| 50S ribosomal protein L4 [Bacillus thuringiensis IBL 4222]
gi|229267296|gb|ACQ48933.1| 50S ribosomal protein L4 [Bacillus anthracis str. A0248]
gi|296321997|gb|ADH04925.1| 50S ribosomal protein L4 [Bacillus thuringiensis BMB171]
gi|298723049|gb|EFI63947.1| 50S ribosomal protein L4 [Bacillus cereus SJ1]
gi|300374017|gb|ADK02921.1| 50S ribosomal protein L4 [Bacillus cereus biovar anthracis str. CI]
gi|324324102|gb|ADY19362.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|326937906|gb|AEA13802.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar chinensis
CT-43]
gi|358350732|dbj|BAL15904.1| ribosomal protein L4 [Bacillus cereus NC7401]
gi|363613386|gb|EHL64903.1| 50S ribosomal protein L4 [Bacillus sp. 7_6_55CFAA_CT2]
gi|364509940|gb|AEW53339.1| LSU ribosomal protein L4p (L1e) [Bacillus cereus F837/76]
gi|384383829|gb|AFH81490.1| 50S ribosomal protein L4 [Bacillus anthracis str. H9401]
gi|401072884|gb|EJP81338.1| 50S ribosomal protein L4 [Bacillus cereus VD022]
gi|401074464|gb|EJP82864.1| 50S ribosomal protein L4 [Bacillus cereus IS075]
gi|401088754|gb|EJP96936.1| 50S ribosomal protein L4 [Bacillus cereus AND1407]
gi|401094436|gb|EJQ02517.1| 50S ribosomal protein L4 [Bacillus cereus BAG3O-2]
gi|401112788|gb|EJQ20662.1| 50S ribosomal protein L4 [Bacillus cereus BAG4X12-1]
gi|401120061|gb|EJQ27862.1| 50S ribosomal protein L4 [Bacillus cereus BAG3X2-2]
gi|401126755|gb|EJQ34489.1| 50S ribosomal protein L4 [Bacillus cereus BAG5O-1]
gi|401127139|gb|EJQ34868.1| 50S ribosomal protein L4 [Bacillus cereus BAG4O-1]
gi|401130794|gb|EJQ38450.1| 50S ribosomal protein L4 [Bacillus cereus BAG5X2-1]
gi|401166796|gb|EJQ74096.1| 50S ribosomal protein L4 [Bacillus cereus HuB4-10]
gi|401182162|gb|EJQ89301.1| 50S ribosomal protein L4 [Bacillus cereus ISP3191]
gi|401187763|gb|EJQ94835.1| 50S ribosomal protein L4 [Bacillus cereus HuB5-5]
gi|401193733|gb|EJR00736.1| 50S ribosomal protein L4 [Bacillus cereus MSX-A1]
gi|401198824|gb|EJR05737.1| 50S ribosomal protein L4 [Bacillus cereus MSX-A12]
gi|401203617|gb|EJR10453.1| 50S ribosomal protein L4 [Bacillus cereus MSX-D12]
gi|401220239|gb|EJR26881.1| 50S ribosomal protein L4 [Bacillus cereus VD045]
gi|401221243|gb|EJR27867.1| 50S ribosomal protein L4 [Bacillus cereus VD014]
gi|401238747|gb|EJR45180.1| 50S ribosomal protein L4 [Bacillus cereus VD102]
gi|401248841|gb|EJR55162.1| 50S ribosomal protein L4 [Bacillus cereus VD115]
gi|401250142|gb|EJR56446.1| 50S ribosomal protein L4 [Bacillus cereus VD148]
gi|401262739|gb|EJR68877.1| 50S ribosomal protein L4 [Bacillus cereus VD154]
gi|401267765|gb|EJR73821.1| 50S ribosomal protein L4 [Bacillus cereus VD166]
gi|401271838|gb|EJR77841.1| 50S ribosomal protein L4 [Bacillus cereus VD156]
gi|401287875|gb|EJR93642.1| 50S ribosomal protein L4 [Bacillus cereus VD169]
gi|401303153|gb|EJS08716.1| 50S ribosomal protein L4 [Bacillus cereus VD200]
gi|401628468|gb|EJS46309.1| 50S ribosomal protein L4 [Bacillus cereus BAG1O-2]
gi|401628986|gb|EJS46814.1| 50S ribosomal protein L4 [Bacillus cereus BAG1X1-2]
gi|401645535|gb|EJS63190.1| 50S ribosomal protein L4 [Bacillus cereus BAG2X1-2]
gi|401791448|gb|AFQ17487.1| 50S ribosomal protein L4 [Bacillus thuringiensis HD-771]
gi|401795511|gb|AFQ09370.1| 50S ribosomal protein L4 [Bacillus cereus FRI-35]
gi|401819521|gb|EJT18698.1| 50S ribosomal protein L4 [Bacillus anthracis str. UR-1]
gi|401877313|gb|AFQ29480.1| 50S ribosomal protein L4 [Bacillus thuringiensis HD-789]
gi|402411835|gb|EJV44198.1| 50S ribosomal protein L4 [Bacillus cereus BAG6O-1]
gi|402421892|gb|EJV54136.1| 50S ribosomal protein L4 [Bacillus cereus BAG4X2-1]
gi|402423992|gb|EJV56188.1| 50S ribosomal protein L4 [Bacillus cereus BAG6X1-1]
gi|402442650|gb|EJV74571.1| 50S ribosomal protein L4 [Bacillus cereus HD73]
gi|402455631|gb|EJV87412.1| 50S ribosomal protein L4 [Bacillus cereus HuB1-1]
gi|402459074|gb|EJV90812.1| 50S ribosomal protein L4 [Bacillus cereus HuB2-9]
gi|403392343|gb|EJY89597.1| 50S ribosomal protein L4 [Bacillus anthracis str. BF1]
gi|407385744|gb|AFU16245.1| 50S ribosomal protein L4 [Bacillus thuringiensis MC28]
gi|409171611|gb|AFV15916.1| 50S ribosomal protein L4 [Bacillus thuringiensis Bt407]
gi|449020535|gb|AGE75698.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|452101882|gb|AGF98821.1| LSU ribosomal protein L4p (L1e) [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 207
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 79/128 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + LA +F + + ++ V Q A +QGTH KT SEV G G+K
Sbjct: 4 VTVYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+RGG T+ GP PRS+A KL KKVRRL +K AL+ + E +
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNI 123
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 124 VVLEDLVL 131
>gi|225629697|ref|ZP_03787669.1| ribosomal protein L4 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225591450|gb|EEH12518.1| ribosomal protein L4 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 201
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 83/131 (63%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N N++ G L +F + I+H +VRWQLA R+ GTH TK IS+VSGT KP+
Sbjct: 5 LVNLSNDNVGTAQLNPLIFSAKQKLSILHDIVRWQLANRRAGTHKTKGISDVSGTTAKPY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
QK T RAR G+LR PQFRGG + P RSH LNKKVR+ GLKIALS + +V +
Sbjct: 65 GQKRTARARPGSLRSPQFRGGGIILRPFVRSHTYSLNKKVRKFGLKIALSLKYLNNQVII 124
Query: 223 SVSLSLFLRPS 233
+L++ ++ +
Sbjct: 125 LDNLNIDVKKT 135
>gi|307244773|ref|ZP_07526874.1| ribosomal protein L4/L1 family protein [Peptostreptococcus stomatis
DSM 17678]
gi|306491871|gb|EFM63923.1| ribosomal protein L4/L1 family protein [Peptostreptococcus stomatis
DSM 17678]
Length = 207
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 83/128 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N ++ G + L +F++ + +++ V+ QLA ++QGT S KT +EV G G+K
Sbjct: 4 INVLNVSGQNVGEIELNDSIFNIEVNAHVLYEAVKCQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R Q+ GG PKPR ++ L KKVRRL +K ALS++ + ++
Sbjct: 64 PWRQKGTGRARQGSIRSVQWVGGGVAFAPKPRDYSYSLPKKVRRLAMKSALSSKVQDNEI 123
Query: 221 SLSVSLSL 228
+ +LSL
Sbjct: 124 IVLDALSL 131
>gi|383827527|ref|ZP_09982621.1| 50S ribosomal protein L4 [Mycobacterium xenopi RIVM700367]
gi|383330227|gb|EID08759.1| 50S ribosomal protein L4 [Mycobacterium xenopi RIVM700367]
Length = 218
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 83/133 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + + +G + L ++FDV ++H+VV Q A +QGTHSTKT EV G G+K
Sbjct: 6 IDVKSPAGKTEGSIELPAELFDVEANIPLMHQVVTAQRAAARQGTHSTKTRGEVRGGGRK 65
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G++R PQF GG T+HGPKPR ++ + KK+ L+ ALS RA G++
Sbjct: 66 PYRQKGTGRARQGSVRAPQFTGGGTVHGPKPRDYSQRTPKKMIAAALRCALSDRARNGRI 125
Query: 221 SLSVSLSLFLRPS 233
L PS
Sbjct: 126 HAVTELVSGQTPS 138
>gi|229083431|ref|ZP_04215779.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-44]
gi|228699864|gb|EEL52501.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-44]
Length = 207
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + LA +F + + ++ V Q A +QGTH KT SEV G
Sbjct: 1 MPKVTVYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS+A KL KKVRRL +K AL+ + E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVE 120
Query: 218 GKVSLSVSLSL 228
+ + L L
Sbjct: 121 NNIVVLEDLVL 131
>gi|423480255|ref|ZP_17456945.1| 50S ribosomal protein L4 [Bacillus cereus BAG6X1-2]
gi|401149260|gb|EJQ56735.1| 50S ribosomal protein L4 [Bacillus cereus BAG6X1-2]
Length = 207
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 79/128 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + LA +F + + ++ V Q A +QGTH KT SEV G G+K
Sbjct: 4 VTVYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+RGG T+ GP PRS+A KL KKVRRL +K AL+ + E +
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNI 123
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 124 VVLEDLVL 131
>gi|260438215|ref|ZP_05792031.1| ribosomal protein L4/L1 family protein [Butyrivibrio crossotus DSM
2876]
gi|292809407|gb|EFF68612.1| ribosomal protein L4/L1 family protein [Butyrivibrio crossotus DSM
2876]
Length = 206
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 75/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G M L VF V + ++H+ V QLA ++QGT S KT SEVSG G+K
Sbjct: 4 VSVYNIEGKVVGDMELNDAVFGVEVNTHLVHQAVVLQLANKRQGTQSAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + PKPR ++ K+NKK + L LK L+ + AE K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGIVFAPKPRDYSFKMNKKEKNLALKSVLTTKVAENK 122
>gi|118591183|ref|ZP_01548582.1| 50S ribosomal protein L4 [Stappia aggregata IAM 12614]
gi|118436259|gb|EAV42901.1| 50S ribosomal protein L4 [Stappia aggregata IAM 12614]
Length = 206
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 72/104 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + ++ ++F + R D+IHRVVRWQLAKRQ GTH SEVSGT KK RQKG+G AR
Sbjct: 14 GSITVSDEIFGLEPRTDLIHRVVRWQLAKRQAGTHKALGRSEVSGTTKKFVRQKGSGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
HG + PQFRGG GP R H+ L KKVR LGLK ALSA+A
Sbjct: 74 HGNKKAPQFRGGGKAFGPIVRDHSHDLPKKVRALGLKHALSAKA 117
>gi|423399384|ref|ZP_17376582.1| 50S ribosomal protein L4 [Bacillus cereus BAG2X1-1]
gi|423409840|ref|ZP_17386989.1| 50S ribosomal protein L4 [Bacillus cereus BAG2X1-3]
gi|401644484|gb|EJS62174.1| 50S ribosomal protein L4 [Bacillus cereus BAG2X1-1]
gi|401652380|gb|EJS69937.1| 50S ribosomal protein L4 [Bacillus cereus BAG2X1-3]
Length = 207
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 79/128 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + LA +F + + ++ V Q A +QGTH KT SEV G G+K
Sbjct: 4 VTVYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+RGG T+ GP PRS+A KL KKVRRL +K AL+ + E +
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNI 123
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 124 VVLEDLVL 131
>gi|228989320|ref|ZP_04149311.1| 50S ribosomal protein L4 [Bacillus pseudomycoides DSM 12442]
gi|228995502|ref|ZP_04155170.1| 50S ribosomal protein L4 [Bacillus mycoides Rock3-17]
gi|229003127|ref|ZP_04160973.1| 50S ribosomal protein L4 [Bacillus mycoides Rock1-4]
gi|228758090|gb|EEM07289.1| 50S ribosomal protein L4 [Bacillus mycoides Rock1-4]
gi|228764231|gb|EEM13110.1| 50S ribosomal protein L4 [Bacillus mycoides Rock3-17]
gi|228770398|gb|EEM18971.1| 50S ribosomal protein L4 [Bacillus pseudomycoides DSM 12442]
Length = 207
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + LA +F + + ++ V Q A +QGTH KT SEV G
Sbjct: 1 MPKVTVYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS+A KL KKVRRL +K AL+ + E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVE 120
Query: 218 GKVSLSVSLSL 228
+ + L L
Sbjct: 121 NNIVVLEDLVL 131
>gi|363423639|ref|ZP_09311702.1| 50S ribosomal protein L4 [Rhodococcus pyridinivorans AK37]
gi|359731577|gb|EHK80619.1| 50S ribosomal protein L4 [Rhodococcus pyridinivorans AK37]
Length = 227
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 83/135 (61%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + G + L ++FD P ++H+VV QLA +QGTH+TKT EV G G
Sbjct: 10 LTLDVKAPGGQTSGSVDLPAEIFDAPANIALLHQVVTAQLAAARQGTHATKTRGEVRGGG 69
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTGRAR G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS RA
Sbjct: 70 KKPYRQKGTGRARQGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARNE 129
Query: 219 KVSLSVSLSLFLRPS 233
++ + L PS
Sbjct: 130 RIHVITELVAGQTPS 144
>gi|319408764|emb|CBI82421.1| 50S ribosomal protein L4 [Bartonella schoenbuchensis R1]
Length = 206
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 79/117 (67%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +F + R+DI+ RVVRWQLA+RQQGTH ++ S+V+ T
Sbjct: 2 DLVIKTLD--GNEAGKLKVSEHIFGLAPREDILQRVVRWQLARRQQGTHQSQGRSDVART 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG HGP RSH L KK R LGL +ALS +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHGPVARSHVHILPKKSRALGLCLALSVK 116
>gi|453075557|ref|ZP_21978343.1| 50S ribosomal protein L4 [Rhodococcus triatomae BKS 15-14]
gi|452762983|gb|EME21270.1| 50S ribosomal protein L4 [Rhodococcus triatomae BKS 15-14]
Length = 223
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 82/135 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V N G + L ++FD ++H+VV QLA +QGTHSTKT EV G G
Sbjct: 8 LTLDVRNADGGTNGTVDLPAEIFDAQANIALMHQVVVAQLAAARQGTHSTKTRGEVRGGG 67
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTGRAR G+ R PQF GG T+HGPKPR ++ + KK++ L+ ALS RA
Sbjct: 68 KKPYRQKGTGRARQGSTRAPQFAGGGTVHGPKPRDYSQRTPKKMKAAALRGALSDRARNE 127
Query: 219 KVSLSVSLSLFLRPS 233
++ + L PS
Sbjct: 128 RIHVITELVAGQTPS 142
>gi|152973957|ref|YP_001373474.1| 50S ribosomal protein L4 [Bacillus cytotoxicus NVH 391-98]
gi|189029490|sp|A7GK21.1|RL4_BACCN RecName: Full=50S ribosomal protein L4
gi|152022709|gb|ABS20479.1| ribosomal protein L4/L1e [Bacillus cytotoxicus NVH 391-98]
Length = 207
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + LA +F + + ++ V Q A +QGTH K SEVSG
Sbjct: 1 MPKVTVYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVVMQRASLRQGTHKVKNRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS+A KL KKVRRL +K AL+ + E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVE 120
Query: 218 GKVSLSVSLSL 228
+ + L L
Sbjct: 121 NNIVVLEDLVL 131
>gi|163938119|ref|YP_001643003.1| 50S ribosomal protein L4 [Bacillus weihenstephanensis KBAB4]
gi|229009620|ref|ZP_04166846.1| 50S ribosomal protein L4 [Bacillus mycoides DSM 2048]
gi|229015513|ref|ZP_04172511.1| 50S ribosomal protein L4 [Bacillus cereus AH1273]
gi|229021722|ref|ZP_04178304.1| 50S ribosomal protein L4 [Bacillus cereus AH1272]
gi|229053957|ref|ZP_04195391.1| 50S ribosomal protein L4 [Bacillus cereus AH603]
gi|229131119|ref|ZP_04260031.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-ST196]
gi|229165099|ref|ZP_04292894.1| 50S ribosomal protein L4 [Bacillus cereus AH621]
gi|423370693|ref|ZP_17348098.1| 50S ribosomal protein L4 [Bacillus cereus VD142]
gi|423393436|ref|ZP_17370662.1| 50S ribosomal protein L4 [Bacillus cereus BAG1X1-3]
gi|423421723|ref|ZP_17398812.1| 50S ribosomal protein L4 [Bacillus cereus BAG3X2-1]
gi|423456268|ref|ZP_17433121.1| 50S ribosomal protein L4 [Bacillus cereus BAG5X1-1]
gi|423473136|ref|ZP_17449878.1| 50S ribosomal protein L4 [Bacillus cereus BAG6O-2]
gi|423485410|ref|ZP_17462092.1| 50S ribosomal protein L4 [Bacillus cereus BtB2-4]
gi|423491135|ref|ZP_17467779.1| 50S ribosomal protein L4 [Bacillus cereus CER057]
gi|423502069|ref|ZP_17478686.1| 50S ribosomal protein L4 [Bacillus cereus CER074]
gi|423514625|ref|ZP_17491132.1| 50S ribosomal protein L4 [Bacillus cereus HuA2-1]
gi|423514963|ref|ZP_17491444.1| 50S ribosomal protein L4 [Bacillus cereus HuA2-4]
gi|423526387|ref|ZP_17502836.1| 50S ribosomal protein L4 [Bacillus cereus HuA4-10]
gi|423556893|ref|ZP_17533196.1| 50S ribosomal protein L4 [Bacillus cereus MC67]
gi|423597000|ref|ZP_17573010.1| 50S ribosomal protein L4 [Bacillus cereus VD048]
gi|423602360|ref|ZP_17578360.1| 50S ribosomal protein L4 [Bacillus cereus VD078]
gi|423614599|ref|ZP_17590456.1| 50S ribosomal protein L4 [Bacillus cereus VD107]
gi|423665376|ref|ZP_17640515.1| 50S ribosomal protein L4 [Bacillus cereus VDM022]
gi|423671560|ref|ZP_17646564.1| 50S ribosomal protein L4 [Bacillus cereus VDM034]
gi|423672636|ref|ZP_17647575.1| 50S ribosomal protein L4 [Bacillus cereus VDM062]
gi|226730619|sp|A9VP78.1|RL4_BACWK RecName: Full=50S ribosomal protein L4
gi|163860316|gb|ABY41375.1| ribosomal protein L4/L1e [Bacillus weihenstephanensis KBAB4]
gi|228618362|gb|EEK75392.1| 50S ribosomal protein L4 [Bacillus cereus AH621]
gi|228652332|gb|EEL08257.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-ST196]
gi|228721375|gb|EEL72896.1| 50S ribosomal protein L4 [Bacillus cereus AH603]
gi|228739590|gb|EEL90004.1| 50S ribosomal protein L4 [Bacillus cereus AH1272]
gi|228745800|gb|EEL95804.1| 50S ribosomal protein L4 [Bacillus cereus AH1273]
gi|228751642|gb|EEM01442.1| 50S ribosomal protein L4 [Bacillus mycoides DSM 2048]
gi|401073429|gb|EJP81851.1| 50S ribosomal protein L4 [Bacillus cereus VD142]
gi|401096842|gb|EJQ04879.1| 50S ribosomal protein L4 [Bacillus cereus BAG3X2-1]
gi|401130867|gb|EJQ38522.1| 50S ribosomal protein L4 [Bacillus cereus BAG5X1-1]
gi|401151463|gb|EJQ58914.1| 50S ribosomal protein L4 [Bacillus cereus CER074]
gi|401162060|gb|EJQ69419.1| 50S ribosomal protein L4 [Bacillus cereus CER057]
gi|401163437|gb|EJQ70783.1| 50S ribosomal protein L4 [Bacillus cereus HuA4-10]
gi|401168464|gb|EJQ75727.1| 50S ribosomal protein L4 [Bacillus cereus HuA2-4]
gi|401194208|gb|EJR01200.1| 50S ribosomal protein L4 [Bacillus cereus MC67]
gi|401218177|gb|EJR24861.1| 50S ribosomal protein L4 [Bacillus cereus VD048]
gi|401225899|gb|EJR32443.1| 50S ribosomal protein L4 [Bacillus cereus VD078]
gi|401237443|gb|EJR43895.1| 50S ribosomal protein L4 [Bacillus cereus VD107]
gi|401290283|gb|EJR95978.1| 50S ribosomal protein L4 [Bacillus cereus VDM022]
gi|401291949|gb|EJR97614.1| 50S ribosomal protein L4 [Bacillus cereus VDM034]
gi|401311496|gb|EJS16791.1| 50S ribosomal protein L4 [Bacillus cereus VDM062]
gi|401629543|gb|EJS47356.1| 50S ribosomal protein L4 [Bacillus cereus BAG1X1-3]
gi|402426634|gb|EJV58755.1| 50S ribosomal protein L4 [Bacillus cereus BAG6O-2]
gi|402441601|gb|EJV73551.1| 50S ribosomal protein L4 [Bacillus cereus BtB2-4]
gi|402442025|gb|EJV73969.1| 50S ribosomal protein L4 [Bacillus cereus HuA2-1]
Length = 207
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 79/128 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + LA +F + + ++ V Q A +QGTH KT SEV G G+K
Sbjct: 4 VTVYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+RGG T+ GP PRS+A KL KKVRRL +K AL+ + E +
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNI 123
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 124 VVLEDLVL 131
>gi|296168558|ref|ZP_06850362.1| 50S ribosomal protein L4 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896621|gb|EFG76260.1| 50S ribosomal protein L4 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 217
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 78/123 (63%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G + L ++FD P ++H+VV Q A +QGTHSTKT EVSG G+KP+RQKGTGRA
Sbjct: 15 EGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGEVSGGGRKPYRQKGTGRA 74
Query: 171 RHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFL 230
R G+ R PQF GG +HGPKPR +A + KK+ L+ ALS RA G++ +
Sbjct: 75 RQGSTRAPQFTGGGVVHGPKPRDYAQRTPKKMIAAALRGALSDRARNGRIHAVTEIVAGQ 134
Query: 231 RPS 233
PS
Sbjct: 135 TPS 137
>gi|373106847|ref|ZP_09521147.1| 50S ribosomal protein L4 [Stomatobaculum longum]
gi|371651786|gb|EHO17212.1| 50S ribosomal protein L4 [Stomatobaculum longum]
Length = 206
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 84/142 (59%), Gaps = 2/142 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNTDGKEVGTIELNDAVFGVELNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK- 219
PWRQKGTG AR G+ R PQ++GG + P PR + I LNKK +R L+ ALS+R E K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWKGGGVVFAPTPRDYTITLNKKEKRQALRCALSSRVQEQKF 123
Query: 220 -VSLSVSLSLFLRPSFSLSLKN 240
V S LS + +LKN
Sbjct: 124 IVLESFELSEVKTKKMAETLKN 145
>gi|414153573|ref|ZP_11409896.1| 50S ribosomal protein L4 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454971|emb|CCO07800.1| 50S ribosomal protein L4 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 206
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 83/128 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + L +VF + + ++H V QLA ++QGTH TKT +EVSG G+K
Sbjct: 4 VALYNVNGEQVGEVELKDEVFGIEPHESVLHDAVTMQLANQRQGTHDTKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R P +R G T+ GP PR ++ L KKVRRL LK ALS++ +
Sbjct: 64 PWRQKGTGRARVGSIRSPLWRKGGTIFGPHPRDYSFSLPKKVRRLALKSALSSKVKSNNI 123
Query: 221 SLSVSLSL 228
+ +L++
Sbjct: 124 IVLDALTI 131
>gi|408380611|ref|ZP_11178195.1| 50S ribosomal protein L4 [Agrobacterium albertimagni AOL15]
gi|407745824|gb|EKF57356.1| 50S ribosomal protein L4 [Agrobacterium albertimagni AOL15]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 77/112 (68%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V +D G + L+ ++F + R+D+I R++R+QLAK++ GTH K SEVS TG K +
Sbjct: 5 VKTLEGKDAGKVSLSEEIFGLEPREDLIARMIRYQLAKKRAGTHKIKGRSEVSRTGSKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+QKGTGRARH + R PQFRGG HGP RSHA L KKVR L L+ ALSA+
Sbjct: 65 KQKGTGRARHHSARAPQFRGGGKAHGPVVRSHAHDLPKKVRALALRHALSAK 116
>gi|167748431|ref|ZP_02420558.1| hypothetical protein ANACAC_03175 [Anaerostipes caccae DSM 14662]
gi|317472036|ref|ZP_07931368.1| ribosomal protein L4/L1 family protein [Anaerostipes sp. 3_2_56FAA]
gi|167652423|gb|EDR96552.1| 50S ribosomal protein L4 [Anaerostipes caccae DSM 14662]
gi|316900440|gb|EFV22422.1| ribosomal protein L4/L1 family protein [Anaerostipes sp. 3_2_56FAA]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 75/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + + L +F V I + ++H V QLA +QGT S KT SEV G G+K
Sbjct: 4 VSVLNMEGNEVEKLNLNDGIFGVEINEHLVHLAVVSQLANNRQGTQSAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G++R PQ+ GG + PKPR ++ KLNKK RRL LK AL++R E K
Sbjct: 64 PWRQKGTGHARQGSIRAPQWTGGGVVFAPKPREYSKKLNKKERRLALKSALTSRVNENK 122
>gi|332685664|ref|YP_004455438.1| 50S ribosomal protein L4 [Melissococcus plutonius ATCC 35311]
gi|379726738|ref|YP_005318923.1| 50S ribosomal protein L4p [Melissococcus plutonius DAT561]
gi|332369673|dbj|BAK20629.1| LSU ribosomal protein L4p (L1e) [Melissococcus plutonius ATCC
35311]
gi|376317641|dbj|BAL61428.1| 50S ribosomal protein L4p [Melissococcus plutonius DAT561]
Length = 207
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 91/156 (58%), Gaps = 9/156 (5%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G M L D+F + +++++ + Q A +QGTH+ K S V G
Sbjct: 1 MPKIALFKQDGTKNGEMTLNEDIFGIDPNQNVVYDAIIMQRASLRQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL +KVRRL +K LS + A+
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPRKVRRLAMKSVLSEKVAD 120
Query: 218 GKVSLSVSLSLFLRP---SFSLSLKN--TDTHVHIV 248
+ SL+ F P F L N DT V I+
Sbjct: 121 NNLVAVESLN-FETPKTKEFKQVLANLSIDTKVLII 155
>gi|433447313|ref|ZP_20410910.1| 50S ribosomal protein L4 [Anoxybacillus flavithermus TNO-09.006]
gi|431999977|gb|ELK20884.1| 50S ribosomal protein L4 [Anoxybacillus flavithermus TNO-09.006]
Length = 207
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 82/128 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E+ G + L VF + K ++ V Q A +QGTH TK +EVSG G+K
Sbjct: 4 VALYNQNGENIGEIELNDAVFGIEPNKHVLFEAVIMQRASLRQGTHKTKNRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K ALS++ E +
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGIVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLENNI 123
Query: 221 SLSVSLSL 228
+ +L L
Sbjct: 124 VVLDNLKL 131
>gi|260589278|ref|ZP_05855191.1| ribosomal protein L4/L1 family protein [Blautia hansenii DSM 20583]
gi|331082684|ref|ZP_08331807.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 6_1_63FAA]
gi|260540359|gb|EEX20928.1| ribosomal protein L4/L1 family protein [Blautia hansenii DSM 20583]
gi|330400303|gb|EGG79945.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 6_1_63FAA]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 77/128 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L VF V I ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGTMELNDAVFGVEINDHLVHLAVVRQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ+ GG + P PR +++K+NKK RR LK L++R E K+
Sbjct: 64 PWRQKGTGHARQGSTRSPQWAGGGVVFAPTPRDYSLKMNKKERRAALKSVLTSRVQENKL 123
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 124 IVLDELKL 131
>gi|126736643|ref|ZP_01752383.1| ribosomal protein L4/L1e [Roseobacter sp. CCS2]
gi|126713956|gb|EBA10827.1| ribosomal protein L4/L1e [Roseobacter sp. CCS2]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 75/111 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++F + RKDI+HRVVRWQ K QGTH SEVS + KK +RQKGTG AR
Sbjct: 14 GSVELNDEIFGLEPRKDILHRVVRWQRNKAMQGTHDVLGRSEVSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
HG+ P FRGG T GP PRSHA L KK R+LGLK ALSA+ A G++ +
Sbjct: 74 HGSRGAPIFRGGGTYKGPTPRSHAHDLPKKFRKLGLKHALSAKVAAGELVI 124
>gi|406573628|ref|ZP_11049375.1| 50S ribosomal protein L4P [Janibacter hoylei PVAS-1]
gi|404556946|gb|EKA62401.1| 50S ribosomal protein L4P [Janibacter hoylei PVAS-1]
Length = 217
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 80/115 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV + +IH+VV QLA +QGTH+TKT ++V G G+KP+RQKGTGRAR
Sbjct: 15 GTVELPAEIFDVAVNVPLIHQVVVAQLAAARQGTHATKTRADVRGGGRKPYRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSL 226
G+ R PQF GG T+HGP+PR + + KK++ L+ ALS RA G++ + +L
Sbjct: 75 QGSTRAPQFAGGGTVHGPQPRDYGQRTPKKMKAAALRGALSDRARHGRIHVLSAL 129
>gi|336319936|ref|YP_004599904.1| ribosomal protein L4/L1e [[Cellvibrio] gilvus ATCC 13127]
gi|336103517|gb|AEI11336.1| ribosomal protein L4/L1e [[Cellvibrio] gilvus ATCC 13127]
Length = 230
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + + G L +VFD +IH+VV QLA +QGTH TKT EV G G
Sbjct: 5 LTVDVLDPQGKKAGTADLPAEVFDAQTNIPLIHQVVVAQLAAARQGTHDTKTRGEVRGGG 64
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP++QKGTGRAR G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS RA G
Sbjct: 65 KKPYKQKGTGRARQGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARAG 124
Query: 219 KVSLSVSLSLFLRPSFSLSLKNTDT-----HVHIV 248
+V + + PS +L D HV +V
Sbjct: 125 RVHVVSGFAPGTAPSTKAALAVLDNLSGRRHVLVV 159
>gi|379737641|ref|YP_005331147.1| 50S ribosomal protein L4 [Blastococcus saxobsidens DD2]
gi|378785448|emb|CCG05121.1| 50S ribosomal protein L4 [Blastococcus saxobsidens DD2]
Length = 258
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 81/125 (64%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
D + V E G + L G++FD ++H+VV QLA +QGTH+TKT ++V G
Sbjct: 10 DRQVDVRTPAGETSGSVTLPGELFDANANVSLMHQVVVAQLAAARQGTHATKTRAQVRGG 69
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G KP+RQKGTGRAR G++R PQF GG +HGP+PR + + KK++ L+ ALS RA E
Sbjct: 70 GVKPYRQKGTGRARQGSIRAPQFSGGGIVHGPQPRDYTQRTPKKMKAAALRGALSDRARE 129
Query: 218 GKVSL 222
G+V +
Sbjct: 130 GRVHV 134
>gi|422012932|ref|ZP_16359568.1| 50S ribosomal protein L4 [Actinomyces georgiae F0490]
gi|394751874|gb|EJF35613.1| 50S ribosomal protein L4 [Actinomyces georgiae F0490]
Length = 214
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 87/138 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + + + L ++FDVP ++H+VV QLA +QGTHSTKT +VSG G+K
Sbjct: 7 VDVVDLKGKKAATVDLPAEIFDVPTNIPLMHQVVVAQLAAARQGTHSTKTRGQVSGGGRK 66
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTG AR G++R PQF GG +HGP+PR + + KK++R L+ ALS RA ++
Sbjct: 67 PFRQKGTGNARQGSIRAPQFTGGGVVHGPQPRDYDQRTPKKMKRGALRSALSDRARADRI 126
Query: 221 SLSVSLSLFLRPSFSLSL 238
+ +L +PS +L
Sbjct: 127 HVVTALFEGDKPSTKAAL 144
>gi|78043328|ref|YP_361117.1| 50S ribosomal protein L4 [Carboxydothermus hydrogenoformans Z-2901]
gi|109893583|sp|Q3A9R7.1|RL4_CARHZ RecName: Full=50S ribosomal protein L4
gi|77995443|gb|ABB14342.1| ribosomal protein L4 [Carboxydothermus hydrogenoformans Z-2901]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 80/128 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N G + L ++F P+ K +++ V LA +++GTH TKT EVSG G+K
Sbjct: 4 VPVYNMEGAQVGEIELKDEIFGAPVNKAVLYEVSLMYLANQRRGTHDTKTRGEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRARHG++R P +R G + GP PR ++ + KKVRR LK ALS + E +
Sbjct: 64 PWRQKGTGRARHGSIRSPLWRKGGIVFGPHPRDYSYSVPKKVRRAALKSALSDKVNENNL 123
Query: 221 SLSVSLSL 228
+ SL+
Sbjct: 124 IVVDSLTF 131
>gi|72163044|ref|YP_290701.1| 50S ribosomal protein L4 [Thermobifida fusca YX]
gi|109893650|sp|Q47LJ4.1|RL4_THEFY RecName: Full=50S ribosomal protein L4
gi|71916776|gb|AAZ56678.1| LSU ribosomal protein L4P [Thermobifida fusca YX]
Length = 222
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 80/122 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + KG + L ++F + +IH+VV Q A +QGTHSTKT EV G GKK
Sbjct: 4 IEVKDREGAAKGSVELPDEIFAQKVNIPLIHQVVVAQQAAGRQGTHSTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G++R PQF GG T+HGPKPR +A + KK++ L+ ALS RA G++
Sbjct: 64 PYRQKGTGRARQGSVRAPQFTGGGTVHGPKPRDYAQRTPKKMKAAALRGALSNRAQHGRI 123
Query: 221 SL 222
+
Sbjct: 124 HV 125
>gi|226365596|ref|YP_002783379.1| 50S ribosomal protein L4 [Rhodococcus opacus B4]
gi|226244086|dbj|BAH54434.1| 50S ribosomal protein L4 [Rhodococcus opacus B4]
Length = 229
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 79/122 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTH+TKT EV G GKKP+RQKGTGRAR
Sbjct: 24 GTVELPAEIFDAPANIALLHQVVVAQLAAARQGTHATKTRGEVRGGGKKPYRQKGTGRAR 83
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS RA ++ + L
Sbjct: 84 QGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARNERIHVITELVAGQT 143
Query: 232 PS 233
PS
Sbjct: 144 PS 145
>gi|89053075|ref|YP_508526.1| 50S ribosomal protein L4 [Jannaschia sp. CCS1]
gi|109893599|sp|Q28UW1.1|RL4_JANSC RecName: Full=50S ribosomal protein L4
gi|88862624|gb|ABD53501.1| LSU ribosomal protein L4P [Jannaschia sp. CCS1]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 81/130 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V + G + L +F + R DI+HRVVRWQ Q GTH KT EVS +
Sbjct: 1 MKVDVIKLDGKKAGSVDLDEALFGLEPRADILHRVVRWQRNNAQAGTHKVKTRREVSYST 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK +RQKGTG ARHG P FRGG GP PRSH +L KK R+LGL+ ALSA+AAEG
Sbjct: 61 KKIYRQKGTGGARHGARSAPIFRGGGVYKGPTPRSHGHELTKKFRKLGLRHALSAKAAEG 120
Query: 219 KVSLSVSLSL 228
++ + S+++
Sbjct: 121 RLVVIESIAM 130
>gi|134298094|ref|YP_001111590.1| 50S ribosomal protein L4 [Desulfotomaculum reducens MI-1]
gi|172044220|sp|A4J112.1|RL4_DESRM RecName: Full=50S ribosomal protein L4
gi|134050794|gb|ABO48765.1| LSU ribosomal protein L4P [Desulfotomaculum reducens MI-1]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 82/128 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + L +VF + + ++H V QLA ++QGTH TKT +EV G G+K
Sbjct: 4 VALYNINGEQVGEVELKDEVFGIEPHEHVMHEAVNMQLANQRQGTHDTKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ R P +R G + GP PR +AI L KKVRRL LK ALS++ + +
Sbjct: 64 PWRQKGTGRARAGSSRSPIWRKGGIVFGPHPRDYAISLPKKVRRLALKSALSSKVLDQNI 123
Query: 221 SLSVSLSL 228
+ SL++
Sbjct: 124 IVLDSLTM 131
>gi|323483300|ref|ZP_08088690.1| hypothetical protein HMPREF9474_00439 [Clostridium symbiosum
WAL-14163]
gi|323691202|ref|ZP_08105478.1| ribosomal protein L4/L1 family protein [Clostridium symbiosum
WAL-14673]
gi|355626527|ref|ZP_09048802.1| 50S ribosomal protein L4 [Clostridium sp. 7_3_54FAA]
gi|323403398|gb|EGA95706.1| hypothetical protein HMPREF9474_00439 [Clostridium symbiosum
WAL-14163]
gi|323504721|gb|EGB20507.1| ribosomal protein L4/L1 family protein [Clostridium symbiosum
WAL-14673]
gi|354820847|gb|EHF05252.1| 50S ribosomal protein L4 [Clostridium sp. 7_3_54FAA]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 74/119 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGNEVGTLELNDSVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PR + I+LNKK +R LK AL++R E K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYTIRLNKKEKRAALKSALTSRVNENK 122
>gi|315497974|ref|YP_004086778.1| 50S ribosomal protein L4/l1e [Asticcacaulis excentricus CB 48]
gi|315415986|gb|ADU12627.1| ribosomal protein L4/L1e [Asticcacaulis excentricus CB 48]
Length = 210
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 91/149 (61%), Gaps = 8/149 (5%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
+ V N G + ++ VF + IR DI+ RVV WQLAKR+ GTH +T +E S TGK
Sbjct: 3 LDVITLDNGTAGSVDVSDAVFGLEEIRNDILARVVNWQLAKRRAGTHKVQTRNENSRTGK 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG- 218
K ++QKG+G ARHG+ R PQF GG+ GP RSHA L KKVR LGL+ ALS++A G
Sbjct: 63 KMYKQKGSGGARHGSRRAPQFVGGSRAFGPVVRSHAFDLQKKVRALGLRHALSSKAKAGA 122
Query: 219 -----KVSLSVSLSLFLRPSF-SLSLKNT 241
+ +L + + LR F +L LKN
Sbjct: 123 LIVLDQATLDSAKTAALRAKFETLGLKNA 151
>gi|149915845|ref|ZP_01904369.1| 50S ribosomal protein L4 [Roseobacter sp. AzwK-3b]
gi|149810168|gb|EDM70014.1| 50S ribosomal protein L4 [Roseobacter sp. AzwK-3b]
Length = 205
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 72/109 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+F + R DI+HRVVRWQ K QQGTH KT SE S + KK +RQKGTG AR
Sbjct: 14 GSVDLGEDIFGLDPRADILHRVVRWQRNKAQQGTHKVKTRSETSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
HG P FR G GP PRSHA L KKVR LGLK ALSA+A G++
Sbjct: 74 HGDRNAPIFRKGGIYKGPTPRSHAHDLPKKVRMLGLKHALSAKAKAGEL 122
>gi|328543359|ref|YP_004303468.1| 50S ribosomal protein L4 [Polymorphum gilvum SL003B-26A1]
gi|326413104|gb|ADZ70167.1| 50S ribosomal protein L4 [Polymorphum gilvum SL003B-26A1]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 71/107 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + ++ ++F + R D+IHRVVRWQLAKRQ GTH K SEVSGT KK RQKG+G AR
Sbjct: 14 GSITVSDEIFGLEPRTDLIHRVVRWQLAKRQAGTHKAKGRSEVSGTTKKFVRQKGSGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
HG + PQFRGG GP R H L KKVR LGL ALS +A G
Sbjct: 74 HGNRKAPQFRGGGKAFGPVVRDHGHDLPKKVRALGLAHALSTKAKAG 120
>gi|298291439|ref|YP_003693378.1| 50S ribosomal protein L4 [Starkeya novella DSM 506]
gi|296927950|gb|ADH88759.1| ribosomal protein L4/L1e [Starkeya novella DSM 506]
Length = 206
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 79/122 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V D G + L+ ++F + R+DI+HR+V WQLA+RQ GTH T + SEV+ T
Sbjct: 1 MELAVKKLDGTDAGSVTLSDEIFGLEPRQDILHRMVVWQLARRQAGTHQTLSRSEVNRTK 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+K ++QKGTG ARHG PQFRGG P SHAI L KKVR L LK ALS++A +
Sbjct: 61 RKMYKQKGTGGARHGAASAPQFRGGAKAFAPVQHSHAIDLPKKVRALALKHALSSKAKDQ 120
Query: 219 KV 220
++
Sbjct: 121 QI 122
>gi|395238078|ref|ZP_10416057.1| 50S ribosomal protein L4 [Turicella otitidis ATCC 51513]
gi|423351629|ref|ZP_17329260.1| 50S ribosomal protein L4 [Turicella otitidis ATCC 51513]
gi|237510710|gb|ACQ99342.1| ribosomal protein L4 [Turicella otitidis]
gi|394486514|emb|CCI84145.1| 50S ribosomal protein L4 [Turicella otitidis ATCC 51513]
gi|404386349|gb|EJZ81512.1| 50S ribosomal protein L4 [Turicella otitidis ATCC 51513]
Length = 217
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 80/122 (65%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++F+ ++ H+VV QLA +QGTHSTKT EV G GKKP+RQKGTGRAR
Sbjct: 17 GQVELPSEIFEREASIELTHQVVVAQLAAARQGTHSTKTRGEVRGGGKKPYRQKGTGRAR 76
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G++R PQF GG +HGPKPR ++ + KK++R L ALS RAA ++ + L +
Sbjct: 77 QGSIRAPQFTGGGIVHGPKPRDYSQRTPKKMKRAALHGALSNRAANDRIHVVEELVPGTK 136
Query: 232 PS 233
PS
Sbjct: 137 PS 138
>gi|237786394|ref|YP_002907099.1| 50S ribosomal protein L4 [Corynebacterium kroppenstedtii DSM 44385]
gi|259491550|sp|C4LL51.1|RL4_CORK4 RecName: Full=50S ribosomal protein L4
gi|237759306|gb|ACR18556.1| 50S ribosomal protein L4 [Corynebacterium kroppenstedtii DSM 44385]
Length = 219
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 84/136 (61%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V G + L VFDV + ++H+VV QLA R+QGTH+TKT +V G
Sbjct: 3 NLTLDVHTADGSTNGTVDLPSSVFDVEVSTPLLHQVVTAQLAARRQGTHATKTRGQVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KP+RQKGTGRAR G++R PQF GG T+HGP+PR + + KK++ L+ ALS RA
Sbjct: 63 GRKPYRQKGTGRARQGSIRAPQFTGGGTVHGPQPRDYDQRTPKKMKAAALRGALSDRARH 122
Query: 218 GKVSLSVSLSLFLRPS 233
++ + L PS
Sbjct: 123 DRIHVVEDLVPGQTPS 138
>gi|383761364|ref|YP_005440346.1| 50S ribosomal protein L4 [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381381632|dbj|BAL98448.1| 50S ribosomal protein L4 [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 211
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 76/109 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF PI ++H+ + QLA + GTH TKT SEVSG G+KPWRQKGTGRAR
Sbjct: 7 GEVELSDAVFAAPIHTAVMHQALMRQLANARLGTHDTKTRSEVSGGGRKPWRQKGTGRAR 66
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
G++R PQ+ GG + GP PR + L KK++R+ L+ ALS +AAEG++
Sbjct: 67 QGSIRAPQWVGGGIVFGPTPRKYTKALPKKMQRMALRSALSVKAAEGQI 115
>gi|350565593|ref|ZP_08934344.1| 50S ribosomal protein L4 [Peptoniphilus indolicus ATCC 29427]
gi|348663600|gb|EGY80162.1| 50S ribosomal protein L4 [Peptoniphilus indolicus ATCC 29427]
Length = 207
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 79/120 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E+ + L ++FD+ + + ++ VV+ LA ++QGT S KT SEV G G+K
Sbjct: 4 VQVINMNGENISEVELNEEIFDIEVNEHAVYLVVKNILANKRQGTKSAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQFRGG + PKPR + KKVRRL LK L+++ +G++
Sbjct: 64 PWRQKGTGRARQGSIRSPQFRGGGVVFAPKPRDFSYTTPKKVRRLALKSVLTSKLRDGEI 123
>gi|422871944|ref|ZP_16918437.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1087]
gi|328945216|gb|EGG39370.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1087]
Length = 207
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K SLS
Sbjct: 72 RARQGSIRSPQWRGGGIVFGPTPRSYAYKLPRKVRRLALKSVYSEKVAENKFVAVDSLSF 131
Query: 229 -------FLRPSFSLSLKNTDTHVHIV 248
F++ +LS+ DT V ++
Sbjct: 132 TAPKTAEFVKVLAALSI---DTKVLVI 155
>gi|266620262|ref|ZP_06113197.1| ribosomal protein L4/L1 family protein [Clostridium hathewayi DSM
13479]
gi|288868165|gb|EFD00464.1| ribosomal protein L4/L1 family protein [Clostridium hathewayi DSM
13479]
Length = 206
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 75/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L VF V + + ++H V QLA ++QGT KT +EVSG G+K
Sbjct: 4 VSVYNMEGNEVGTLELNDAVFGVNVNEHLVHLAVVSQLANKRQGTQKAKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PW+QKGTG AR G+ R PQ+ GG + P PR + IKLNKK R+L LK AL++R E K
Sbjct: 64 PWKQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYTIKLNKKERKLALKSALTSRVNENK 122
>gi|111023097|ref|YP_706069.1| 50S ribosomal protein L4 [Rhodococcus jostii RHA1]
gi|397736517|ref|ZP_10503199.1| 50S ribosomal protein L4 [Rhodococcus sp. JVH1]
gi|110822627|gb|ABG97911.1| 50S ribosomal protein L4 [Rhodococcus jostii RHA1]
gi|396927707|gb|EJI94934.1| 50S ribosomal protein L4 [Rhodococcus sp. JVH1]
Length = 229
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 79/122 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTH+TKT EV G GKKP+RQKGTGRAR
Sbjct: 24 GTVDLPAEIFDAPANIALLHQVVVAQLAAARQGTHATKTRGEVRGGGKKPYRQKGTGRAR 83
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS RA ++ + L
Sbjct: 84 QGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARNERIHVITELVAGQT 143
Query: 232 PS 233
PS
Sbjct: 144 PS 145
>gi|424779809|ref|ZP_18206701.1| LSU ribosomal protein L4p [Catellicoccus marimammalium M35/04/3]
gi|422843559|gb|EKU27989.1| LSU ribosomal protein L4p [Catellicoccus marimammalium M35/04/3]
Length = 207
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L +F + ++ ++ + Q A +QGTH+ + S VSG
Sbjct: 1 MPTVALFKQDGTQNGEVTLNDAIFGIEPNENAVYDAIIMQRASLRQGTHAVRNRSAVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS + AE
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSEKVAE 120
Query: 218 GKVSLSVSLSLFLRP---SFSLSLKNTD 242
K+ + +L+ F P F L N D
Sbjct: 121 NKMVIVDALN-FETPKTKEFKQVLANLD 147
>gi|419961176|ref|ZP_14477185.1| 50S ribosomal protein L4 [Rhodococcus opacus M213]
gi|424851585|ref|ZP_18275982.1| 50S ribosomal protein L4 [Rhodococcus opacus PD630]
gi|432336150|ref|ZP_19587680.1| 50S ribosomal protein L4 [Rhodococcus wratislaviensis IFP 2016]
gi|356666250|gb|EHI46321.1| 50S ribosomal protein L4 [Rhodococcus opacus PD630]
gi|414573497|gb|EKT84181.1| 50S ribosomal protein L4 [Rhodococcus opacus M213]
gi|430776918|gb|ELB92311.1| 50S ribosomal protein L4 [Rhodococcus wratislaviensis IFP 2016]
Length = 229
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 79/122 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTH+TKT EV G GKKP+RQKGTGRAR
Sbjct: 24 GTVDLPAEIFDAPANIALLHQVVVAQLAAARQGTHATKTRGEVRGGGKKPYRQKGTGRAR 83
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS RA ++ + L
Sbjct: 84 QGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARNERIHVITELVAGQT 143
Query: 232 PS 233
PS
Sbjct: 144 PS 145
>gi|226323011|ref|ZP_03798529.1| hypothetical protein COPCOM_00783 [Coprococcus comes ATCC 27758]
gi|225208578|gb|EEG90932.1| 50S ribosomal protein L4 [Coprococcus comes ATCC 27758]
Length = 206
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 75/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGTIDLNDAVFGVEVNEHLVHMAVVSQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PR ++ KLNKK RR LK AL++R E K
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPTPRDYSFKLNKKERRAALKSALTSRVEEKK 122
>gi|222529729|ref|YP_002573611.1| 50S ribosomal protein L4 [Caldicellulosiruptor bescii DSM 6725]
gi|254803711|sp|B9MKI0.1|RL4_ANATD RecName: Full=50S ribosomal protein L4
gi|222456576|gb|ACM60838.1| ribosomal protein L4/L1e [Caldicellulosiruptor bescii DSM 6725]
Length = 208
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 76/118 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N + G + L +F+VPI ++H+ V LA R+QGT + KT +EV G G+K
Sbjct: 4 VPVYNIEGQQIGEIELNDSIFNVPINTHVLHQAVVAHLANRRQGTFAAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
PWRQKGTGRAR G++R P +R G + KPR +I L KKV+RL LK ALS++ E
Sbjct: 64 PWRQKGTGRARQGSIRAPTWRKGGVVFAKKPRDFSIDLPKKVKRLALKCALSSKVKEN 121
>gi|332655144|ref|ZP_08420885.1| ribosomal protein L4/L1 family protein [Ruminococcaceae bacterium
D16]
gi|332516004|gb|EGJ45613.1| ribosomal protein L4/L1 family protein [Ruminococcaceae bacterium
D16]
Length = 206
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
Query: 104 TNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
N FN + G + L+ VF + + ++H VV+ LA +QGT S T +EVSG GKK
Sbjct: 4 ANVFNMAGQQVGEIELSEAVFGIEPNQAVVHEVVKNHLANCRQGTQSALTRAEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ+ G + PKPR ++ LNKKV+RL LK ALSA+AA G +
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTHGGIVFAPKPRDYSYTLNKKVKRLALKSALSAKAASGDI 123
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 124 LVVDELKL 131
>gi|260893371|ref|YP_003239468.1| 50S ribosomal protein L4 [Ammonifex degensii KC4]
gi|260865512|gb|ACX52618.1| ribosomal protein L4/L1e [Ammonifex degensii KC4]
Length = 207
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 77/126 (61%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V N E G M L +VF + ++H VV LA R++GTHSTKT EV G G+KPW
Sbjct: 6 VYNLAGEPVGEMELKEEVFGIEPNPYVVHEVVVMHLANRRRGTHSTKTRGEVRGGGRKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
RQKGTGRARHG++R P +R G + GPKPR + + KKVRRL LK LS + G + +
Sbjct: 66 RQKGTGRARHGSIRSPIWRKGGVVFGPKPRDYDYTVPKKVRRLALKSVLSDKLRAGNLVV 125
Query: 223 SVSLSL 228
L L
Sbjct: 126 LEELRL 131
>gi|355681921|ref|ZP_09062209.1| 50S ribosomal protein L4 [Clostridium citroniae WAL-17108]
gi|354811332|gb|EHE95965.1| 50S ribosomal protein L4 [Clostridium citroniae WAL-17108]
Length = 206
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 76/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGTLELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ++GG + P PR + I+LNKK +R LK AL++R + K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWKGGGVVFAPTPRDYTIRLNKKEKRAALKSALTSRVQDNK 122
>gi|422822250|ref|ZP_16870443.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK353]
gi|422852763|ref|ZP_16899427.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK160]
gi|324990001|gb|EGC21942.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK353]
gi|325697977|gb|EGD39860.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK160]
Length = 207
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDTVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K SLS
Sbjct: 72 RARQGSIRSPQWRGGGIVFGPTPRSYAYKLPRKVRRLALKSVYSEKVAENKFVAVDSLS- 130
Query: 229 FLRPSFS-----LSLKNTDTHVHIV 248
F P + L+ + DT V ++
Sbjct: 131 FTAPKTAEFAKVLAALSIDTKVLVI 155
>gi|85715130|ref|ZP_01046114.1| 50S ribosomal protein L4 [Nitrobacter sp. Nb-311A]
gi|85698045|gb|EAQ35918.1| 50S ribosomal protein L4 [Nitrobacter sp. Nb-311A]
Length = 206
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 83/130 (63%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + +T + G + L+ +F + RKD+I R V WQLAKRQ GT TK +E+ TG
Sbjct: 1 MELNITTLEGKAAGSVQLSDGIFGLEPRKDLIQRCVNWQLAKRQAGTRKTKGRAEIWRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSHA L KKVR L L+ ALSA+A +G
Sbjct: 61 KKLFKQKGTGNARHGSARAPQFRGGGRAFGPVVRSHAHDLPKKVRALALRHALSAKAKDG 120
Query: 219 KVSLSVSLSL 228
+ + S+ L
Sbjct: 121 GLIVIDSVEL 130
>gi|331004122|ref|ZP_08327602.1| 50S ribosomal protein L4 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|402312693|ref|ZP_10831617.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium ICM7]
gi|404483000|ref|ZP_11018225.1| 50S ribosomal protein L4 [Clostridiales bacterium OBRC5-5]
gi|330411532|gb|EGG90942.1| 50S ribosomal protein L4 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|400369151|gb|EJP22154.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium ICM7]
gi|404344090|gb|EJZ70449.1| 50S ribosomal protein L4 [Clostridiales bacterium OBRC5-5]
Length = 206
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 76/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 ISVFNIEGKEVGSIELNDAVFGVNVNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PW+QKGTG AR G+ R PQ++GG + P PR + I LNKK +R+ LK AL++R E K
Sbjct: 64 PWKQKGTGHARQGSTRSPQWKGGGVVFAPTPRDYTINLNKKEKRIALKSALTSRVLENK 122
>gi|422856366|ref|ZP_16903023.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1]
gi|327458432|gb|EGF04788.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1]
Length = 207
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K SLS
Sbjct: 72 RARQGSIRSPQWRGGGIVFGPTPRSYAYKLPRKVRRLALKSVYSEKVAENKFVAVDSLS- 130
Query: 229 FLRPSFS-----LSLKNTDTHVHIV 248
F P + L+ + DT V ++
Sbjct: 131 FTAPKTAEFAKVLAALSIDTKVLVI 155
>gi|125716986|ref|YP_001034119.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK36]
gi|323350941|ref|ZP_08086599.1| 50S ribosomal protein L4 [Streptococcus sanguinis VMC66]
gi|401681287|ref|ZP_10813191.1| 50S ribosomal protein L4 [Streptococcus sp. AS14]
gi|422822937|ref|ZP_16871126.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK405]
gi|422825093|ref|ZP_16873272.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK678]
gi|422847985|ref|ZP_16894668.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK72]
gi|422850348|ref|ZP_16897018.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK150]
gi|422857191|ref|ZP_16903841.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1057]
gi|422861232|ref|ZP_16907874.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK330]
gi|422863734|ref|ZP_16910364.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK408]
gi|422864721|ref|ZP_16911346.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1058]
gi|422877761|ref|ZP_16924231.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1056]
gi|422880429|ref|ZP_16926892.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1059]
gi|422883160|ref|ZP_16929609.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK49]
gi|422929858|ref|ZP_16962798.1| 50S ribosomal protein L4 [Streptococcus sanguinis ATCC 29667]
gi|422930558|ref|ZP_16963489.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK340]
gi|166199916|sp|A3CK64.1|RL4_STRSV RecName: Full=50S ribosomal protein L4
gi|125496903|gb|ABN43569.1| 50S ribosomal protein L4, putative [Streptococcus sanguinis SK36]
gi|322122923|gb|EFX94629.1| 50S ribosomal protein L4 [Streptococcus sanguinis VMC66]
gi|324991816|gb|EGC23741.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK405]
gi|324996294|gb|EGC28202.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK678]
gi|325686406|gb|EGD28436.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK72]
gi|325695809|gb|EGD37706.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK150]
gi|327463722|gb|EGF10038.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1057]
gi|327467336|gb|EGF12836.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK330]
gi|327471741|gb|EGF17182.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK408]
gi|327490462|gb|EGF22244.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1058]
gi|332358878|gb|EGJ36700.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1056]
gi|332363752|gb|EGJ41532.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK49]
gi|332364033|gb|EGJ41811.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK1059]
gi|339613690|gb|EGQ18421.1| 50S ribosomal protein L4 [Streptococcus sanguinis ATCC 29667]
gi|339621343|gb|EGQ25906.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK340]
gi|400187084|gb|EJO21286.1| 50S ribosomal protein L4 [Streptococcus sp. AS14]
Length = 207
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K SLS
Sbjct: 72 RARQGSIRSPQWRGGGIVFGPTPRSYAYKLPRKVRRLALKSVYSEKVAENKFVAVDSLS- 130
Query: 229 FLRPSFS-----LSLKNTDTHVHIV 248
F P + L+ + DT V ++
Sbjct: 131 FTAPKTAEFAKVLAALSIDTKVLVI 155
>gi|443673934|ref|ZP_21138980.1| 50S ribosomal protein L4 [Rhodococcus sp. AW25M09]
gi|443413534|emb|CCQ17318.1| 50S ribosomal protein L4 [Rhodococcus sp. AW25M09]
Length = 225
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 77/117 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + G + L ++FD P ++H+VV QLA +QGTHSTKT EV G G
Sbjct: 12 LTLDVKEAGGKTNGTVDLPAEIFDAPANIALLHQVVIAQLAAARQGTHSTKTRGEVRGGG 71
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
KKP+RQKGTGRAR G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS RA
Sbjct: 72 KKPYRQKGTGRARQGSTRAPQFVGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRA 128
>gi|330795906|ref|XP_003286011.1| hypothetical protein DICPUDRAFT_149944 [Dictyostelium purpureum]
gi|325084009|gb|EGC37447.1| hypothetical protein DICPUDRAFT_149944 [Dictyostelium purpureum]
Length = 258
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
Query: 95 LHQDLVIPVTNFFNEDK-GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISE 153
L +++ P+ +F ++ G + L+ D+F P+R D++HR+VR+Q AK QQGTH +
Sbjct: 42 LKEEIEFPIIDFDSKSNVGTIQLSKDIFSRPLRIDLLHRMVRYQRAKSQQGTHQALNMER 101
Query: 154 VSGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSA 213
+ + KKP++QKGTGRAR GT Q +GG P RSHA L KKVR+L LK+ALS+
Sbjct: 102 KTSSNKKPFKQKGTGRARQGTNHAVQMKGGARAFPPTSRSHAHDLPKKVRQLCLKVALSS 161
Query: 214 RAAEGKV 220
+ A+ K+
Sbjct: 162 KLAQNKL 168
>gi|225387236|ref|ZP_03757000.1| hypothetical protein CLOSTASPAR_00988 [Clostridium asparagiforme
DSM 15981]
gi|225046654|gb|EEG56900.1| hypothetical protein CLOSTASPAR_00988 [Clostridium asparagiforme
DSM 15981]
Length = 206
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 75/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGSMELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ++GG + P PR + I LNKK +R LK AL++R GK
Sbjct: 64 PWRQKGTGHARQGSTRSPQWKGGGVVFAPVPRDYTITLNKKEKRAALKSALTSRVQGGK 122
>gi|397670938|ref|YP_006512473.1| 50S ribosomal protein L4 [Propionibacterium propionicum F0230a]
gi|395141018|gb|AFN45125.1| 50S ribosomal protein L4 [Propionibacterium propionicum F0230a]
Length = 235
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 83/131 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G L G++FDV +IH+VV QLA +QGTHSTKT EV G G KPWRQKGTGRAR
Sbjct: 17 GTAELPGEIFDVQTNIPLIHQVVVAQLAAARQGTHSTKTRGEVRGGGSKPWRQKGTGRAR 76
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
HG+ R P + GG T+HGPKPR ++ + KK+ L+ +LS RA +G+V + L
Sbjct: 77 HGSRRSPIWTGGGTVHGPKPRDYSQRTPKKMIVAALRGSLSDRARDGQVFVVSELVSGEV 136
Query: 232 PSFSLSLKNTD 242
PS +L+ +
Sbjct: 137 PSTRTALETLE 147
>gi|312127227|ref|YP_003992101.1| 50S ribosomal protein L4/L1e [Caldicellulosiruptor hydrothermalis
108]
gi|312793938|ref|YP_004026861.1| 50S ribosomal protein L4/L1e [Caldicellulosiruptor kristjanssonii
177R1B]
gi|344996424|ref|YP_004798767.1| 50S ribosomal protein L4 [Caldicellulosiruptor lactoaceticus 6A]
gi|311777246|gb|ADQ06732.1| ribosomal protein L4/L1e [Caldicellulosiruptor hydrothermalis 108]
gi|312181078|gb|ADQ41248.1| ribosomal protein L4/L1e [Caldicellulosiruptor kristjanssonii
177R1B]
gi|343964643|gb|AEM73790.1| ribosomal protein L4/L1e [Caldicellulosiruptor lactoaceticus 6A]
Length = 208
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 76/118 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N + G + L +F+VPI ++H+ V LA R+QGT + KT +EV G G+K
Sbjct: 4 VPVYNIEGQQIGEIELNDSIFNVPINTHVLHQAVVAHLANRRQGTFAAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
PWRQKGTGRAR G++R P +R G + KPR +I L KKV+RL LK ALS++ E
Sbjct: 64 PWRQKGTGRARQGSIRAPTWRKGGVVFAKKPRDFSIDLPKKVKRLALKCALSSKVKEN 121
>gi|89100348|ref|ZP_01173213.1| 50S ribosomal protein L4 [Bacillus sp. NRRL B-14911]
gi|89084969|gb|EAR64105.1| 50S ribosomal protein L4 [Bacillus sp. NRRL B-14911]
Length = 207
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 79/117 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F + ++ V Q A +QGTH TK SEV+G G+KPWRQKGTGRAR
Sbjct: 15 GEIELNETIFGIEPNNHVLFEAVVMQRASLRQGTHKTKIRSEVAGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS++ AE + + +L+L
Sbjct: 75 QGSIRSPQWRGGGTVFGPTPRSYSYKLPKKVRRLAIKSALSSKVAEENILVLENLAL 131
>gi|225571553|ref|ZP_03780549.1| hypothetical protein CLOHYLEM_07651 [Clostridium hylemonae DSM
15053]
gi|225159630|gb|EEG72249.1| hypothetical protein CLOHYLEM_07651 [Clostridium hylemonae DSM
15053]
Length = 206
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 2/144 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGTIDLNDAVFGVEVNEHLVHMAVVSQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK- 219
PWRQKGTG AR G+ R PQ+ GG + P PR ++ K+NKK +R LK AL+ + E K
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPTPRDYSFKMNKKEKRAALKSALTTKVEEKKF 123
Query: 220 -VSLSVSLSLFLRPSFSLSLKNTD 242
V ++ +F+ LKN D
Sbjct: 124 IVVDEIAFDEIKTKNFANVLKNLD 147
>gi|342733057|ref|YP_004771896.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384456425|ref|YP_005669023.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417959301|ref|ZP_12602136.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-1]
gi|417965178|ref|ZP_12606767.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-4]
gi|417966153|ref|ZP_12607560.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-5]
gi|417968156|ref|ZP_12609199.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-co]
gi|418015536|ref|ZP_12655101.1| ribosomal protein L4/L1 family protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418373310|ref|ZP_12965401.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342330512|dbj|BAK57154.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345505871|gb|EGX28165.1| ribosomal protein L4/L1 family protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984771|dbj|BAK80447.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380333672|gb|EIA24208.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-1]
gi|380338716|gb|EIA27582.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-4]
gi|380340262|gb|EIA28883.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-co]
gi|380341699|gb|EIA30173.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|380343365|gb|EIA31747.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-5]
Length = 208
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 90/150 (60%), Gaps = 8/150 (5%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L ++FDV I+K +H+VV QLA ++QGT S KT SEVSG GKK
Sbjct: 4 VAVYNICGEKVGELELLKEIFDVEIKKYAVHQVVVTQLANKRQGTQSAKTRSEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+ G + PKPR + + ++K +R++ + L+++ +
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIHGGVVFAPKPRDYRMNVSKTLRKVAITSVLTSKVKDE-- 121
Query: 221 SLSVSLSLFLRPSFSLSLKNTDTHVHIVSS 250
+L + S S + T V ++++
Sbjct: 122 ------NLLVLDSISFNFPKTKEMVKVMNN 145
>gi|3122740|sp|O06114.1|RL4_MYCSM RecName: Full=50S ribosomal protein L4
gi|2113890|emb|CAA73669.1| ribosomal protein L4 [Mycobacterium smegmatis]
Length = 215
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 79/122 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA ++QGTHSTKT EVSG GKKP+RQKG+GRAR
Sbjct: 16 GSVELPAELFDVEPNIALMHQVVTAQLAAKRQGTHSTKTRGEVSGGGKKPYRQKGSGRAR 75
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG T+HGPKPR ++ + KK+ L+ ALS RA ++ L
Sbjct: 76 QGSTRAPQFTGGGTVHGPKPRDYSQRTPKKMIAAALRGALSDRARNDRIHAVTELVEGQT 135
Query: 232 PS 233
PS
Sbjct: 136 PS 137
>gi|414157744|ref|ZP_11414040.1| 50S ribosomal protein L4 [Streptococcus sp. F0441]
gi|410871662|gb|EKS19609.1| 50S ribosomal protein L4 [Streptococcus sp. F0441]
Length = 207
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 73/108 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLNDAIFGIEPNQSVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG T+ GP PRS+A KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGTVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAENK 122
>gi|365845085|ref|ZP_09385883.1| 50S ribosomal protein L4 [Flavonifractor plautii ATCC 29863]
gi|364562009|gb|EHM39881.1| 50S ribosomal protein L4 [Flavonifractor plautii ATCC 29863]
Length = 206
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 80/126 (63%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G + L+ VF + + ++H VV+ LA +QGT S T +EVSG G KPW
Sbjct: 6 LVNMAGTQVGEVELSEAVFGIEPNQTVVHEVVKNHLANCRQGTQSALTRAEVSGGGIKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
RQKGTGRAR G+ R PQ+ G + PKPR ++ LNKKV+RL LK ALSA+AA G + +
Sbjct: 66 RQKGTGRARQGSTRAPQWTHGGIVFAPKPRDYSYVLNKKVKRLALKSALSAKAASGDIVV 125
Query: 223 SVSLSL 228
SL+L
Sbjct: 126 VDSLNL 131
>gi|332982708|ref|YP_004464149.1| 50S ribosomal protein L4P [Mahella australiensis 50-1 BON]
gi|332700386|gb|AEE97327.1| LSU ribosomal protein L4P [Mahella australiensis 50-1 BON]
Length = 207
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 85/128 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV N + G + L ++F + + + +H+VV+ QLA ++QGT S KT EV G G+K
Sbjct: 4 VPVYNIEGQQVGEIELKDEIFGIEVNEAALHQVVQMQLANKRQGTQSAKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+ G + PKPR ++ L KK+RRL +K AL+++ + ++
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIKGGVVFAPKPRDYSYTLPKKLRRLAMKSALTSKVRDNEL 123
Query: 221 SLSVSLSL 228
+ ++S+
Sbjct: 124 IVLDNISI 131
>gi|300865403|ref|ZP_07110208.1| 50S ribosomal protein L4 [Oscillatoria sp. PCC 6506]
gi|300336586|emb|CBN55358.1| 50S ribosomal protein L4 [Oscillatoria sp. PCC 6506]
Length = 211
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 74/115 (64%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V N+ E+ G L V I+HR +R Q+ +QGT STKT +EV G G+KPW
Sbjct: 6 VRNWQGEEVGETTLELRVAKEENASHIVHRALRRQMVNARQGTASTKTRAEVRGGGRKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
RQKGTGRAR G++R P +RGG GPKPR IK+NKK RRL L+ AL +RAAE
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVSFGPKPRDFDIKMNKKERRLALRTALQSRAAE 120
>gi|157149830|ref|YP_001451234.1| 50S ribosomal protein L4 [Streptococcus gordonii str. Challis
substr. CH1]
gi|262283582|ref|ZP_06061347.1| ribosomal protein L4/L1 family protein [Streptococcus sp.
2_1_36FAA]
gi|189042889|sp|A8AZM4.1|RL4_STRGC RecName: Full=50S ribosomal protein L4
gi|157074624|gb|ABV09307.1| ribosomal protein L4/L1 family [Streptococcus gordonii str. Challis
substr. CH1]
gi|262260639|gb|EEY79340.1| ribosomal protein L4/L1 family protein [Streptococcus sp.
2_1_36FAA]
Length = 207
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAIFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K SLS
Sbjct: 72 RARQGSIRSPQWRGGGVVFGPTPRSYAYKLPRKVRRLALKSVYSEKVAENKFVAVDSLS- 130
Query: 229 FLRPSFS-----LSLKNTDTHVHIV 248
F P + L+ + DT V ++
Sbjct: 131 FTAPKTAEFAKVLAALSIDTKVLVI 155
>gi|373116805|ref|ZP_09530956.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 7_1_58FAA]
gi|371668881|gb|EHO33985.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 7_1_58FAA]
Length = 206
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 80/126 (63%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N G + L+ VF + + ++H VV+ LA +QGT S T +EVSG G KPW
Sbjct: 6 LVNMAGTQVGEVELSEAVFGIEPNQTVVHEVVKNHLANCRQGTQSALTRAEVSGGGIKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
RQKGTGRAR G+ R PQ+ G + PKPR ++ LNKKV+RL LK ALSA+AA G + +
Sbjct: 66 RQKGTGRARQGSTRAPQWTHGGIVFAPKPRDYSYVLNKKVKRLALKSALSAKAASGDIVV 125
Query: 223 SVSLSL 228
SL+L
Sbjct: 126 VDSLNL 131
>gi|315652353|ref|ZP_07905345.1| 50S ribosomal protein L4 [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485476|gb|EFU75866.1| 50S ribosomal protein L4 [Lachnoanaerobaculum saburreum DSM 3986]
Length = 206
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 76/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 ISVFNIEGKEVGSIELNDAVFGVNVNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PW+QKGTG AR G+ R PQ++GG + P PR + I LNKK +R+ LK AL++R E K
Sbjct: 64 PWKQKGTGHARQGSTRSPQWKGGGVVFAPTPRDYTINLNKKEKRIALKSALTSRVLENK 122
>gi|410867095|ref|YP_006981706.1| 50S ribosomal protein L4 [Propionibacterium acidipropionici ATCC
4875]
gi|410823736|gb|AFV90351.1| 50S ribosomal protein L4 [Propionibacterium acidipropionici ATCC
4875]
Length = 297
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 89/139 (64%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ ++ I V + G + L GDVFDV +IH+VV Q A +QGTHSTKT EV
Sbjct: 1 MSENKTIDVLTAKGKKSGSVELPGDVFDVATNVPLIHQVVVAQQAAARQGTHSTKTRGEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+G GKKPWRQKGTGRAR G+ R PQ+ GG T+ GP+PRS+A + KK+ L+ ALS R
Sbjct: 61 AGGGKKPWRQKGTGRARQGSTRSPQWVGGGTVFGPQPRSYAQRTPKKMVAAALRGALSDR 120
Query: 215 AAEGKVSLSVSLSLFLRPS 233
A +G++ + SL +PS
Sbjct: 121 ARDGQIFVLASLVESDKPS 139
>gi|306825985|ref|ZP_07459321.1| ribosomal protein L4/L1 family protein [Streptococcus sp. oral
taxon 071 str. 73H25AP]
gi|401683834|ref|ZP_10815719.1| 50S ribosomal protein L4 [Streptococcus sp. BS35b]
gi|417794827|ref|ZP_12442063.1| 50S ribosomal protein L4 [Streptococcus oralis SK255]
gi|417940345|ref|ZP_12583633.1| 50S ribosomal protein L4 [Streptococcus oralis SK313]
gi|418975514|ref|ZP_13523418.1| 50S ribosomal protein L4 [Streptococcus oralis SK1074]
gi|304431701|gb|EFM34681.1| ribosomal protein L4/L1 family protein [Streptococcus sp. oral
taxon 071 str. 73H25AP]
gi|334267140|gb|EGL85608.1| 50S ribosomal protein L4 [Streptococcus oralis SK255]
gi|343389226|gb|EGV01811.1| 50S ribosomal protein L4 [Streptococcus oralis SK313]
gi|383347497|gb|EID25475.1| 50S ribosomal protein L4 [Streptococcus oralis SK1074]
gi|400186874|gb|EJO21079.1| 50S ribosomal protein L4 [Streptococcus sp. BS35b]
Length = 207
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 73/108 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLNDAIFGIEPNQSVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG T+ GP PRS+A KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGTVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAENK 122
>gi|225869537|ref|YP_002745484.1| 50S ribosomal protein L4 [Streptococcus equi subsp. equi 4047]
gi|254803754|sp|C0M6G6.1|RL4_STRE4 RecName: Full=50S ribosomal protein L4
gi|225698941|emb|CAW91969.1| 50S ribosomal protein L4 [Streptococcus equi subsp. equi 4047]
Length = 207
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L D+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++
Sbjct: 19 LNDDIFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSI 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS 235
R PQ+RGG + GP PRS+ KL +KVRRL LK SA+ AE K SLS F P +
Sbjct: 79 RSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVESLS-FAAPKTA 137
Query: 236 -----LSLKNTDTHVHIV 248
LS + DT V ++
Sbjct: 138 EFAKVLSALSIDTKVLVL 155
>gi|162446958|ref|YP_001620090.1| 50S ribosomal protein L4 [Acholeplasma laidlawii PG-8A]
gi|189029489|sp|A9NED4.1|RL4_ACHLI RecName: Full=50S ribosomal protein L4
gi|161985065|gb|ABX80714.1| large subunit ribosomal protein L4 [Acholeplasma laidlawii PG-8A]
Length = 207
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 77/115 (66%), Gaps = 3/115 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N FN E + L +F + + +++ VV Q A +QGT TKT +EV G
Sbjct: 1 MPTLNLFNQAGEKISEVALNDAIFGITPNQQVLYDVVNAQRAALRQGTAKTKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALS 212
GKKPWRQKGTGRAR G++R PQ+RGG + GP PRS+A+K+N+KV++L LK ALS
Sbjct: 61 GKKPWRQKGTGRARQGSIRSPQWRGGGIVFGPIPRSYAVKVNQKVKQLALKSALS 115
>gi|197104697|ref|YP_002130074.1| 50S ribosomal protein L4 [Phenylobacterium zucineum HLK1]
gi|226730702|sp|B4R8L8.1|RL4_PHEZH RecName: Full=50S ribosomal protein L4
gi|196478117|gb|ACG77645.1| 50S ribosomal protein L4 [Phenylobacterium zucineum HLK1]
Length = 212
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 83/131 (63%), Gaps = 7/131 (5%)
Query: 112 GFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L D+F + IR DI+ R V WQLAKR+ GTH + +EVS TGKK ++QKGTG A
Sbjct: 14 GSIELPDDIFGIEEIRADILQRCVTWQLAKRRAGTHKIQVRNEVSRTGKKMYKQKGTGGA 73
Query: 171 RHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV------SLSV 224
RHG+ R QF GG HGP RSHA L KKVR L L+ ALS++A +G + +L+
Sbjct: 74 RHGSRRAAQFVGGAKAHGPVVRSHAFDLPKKVRALALRHALSSKAKDGSLIVLDSATLTE 133
Query: 225 SLSLFLRPSFS 235
+ + LR SF
Sbjct: 134 AKTAALRASFE 144
>gi|419719246|ref|ZP_14246532.1| 50S ribosomal protein L4 [Lachnoanaerobaculum saburreum F0468]
gi|383304572|gb|EIC95971.1| 50S ribosomal protein L4 [Lachnoanaerobaculum saburreum F0468]
Length = 206
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 76/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 ISVFNIEGKEVGSIELNDAVFGVNVNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PW+QKGTG AR G+ R PQ++GG + P PR + I LNKK +R+ LK AL++R E K
Sbjct: 64 PWKQKGTGHARQGSTRSPQWKGGGVVFAPTPRDYTINLNKKEKRIALKSALTSRVLENK 122
>gi|110180282|gb|ABG54384.1| 23S ribosomal protein L4 [Brucella ceti]
gi|110180286|gb|ABG54386.1| 23S ribosomal protein L4 [Brucella ceti]
Length = 206
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 76/115 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T +D G + L ++F + R DI+ RVVRWQLA+RQQG+H + +VS TG K
Sbjct: 3 LTITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
++QKGT RARH + R PQFRGG HGP R+H L KKV LGL+ ALSA+A
Sbjct: 63 MYKQKGTDRARHHSARAPQFRGGGQAHGPVVRNHDHDLPKKVLALGLRHALSAKA 117
>gi|422849666|ref|ZP_16896342.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK115]
gi|325689230|gb|EGD31236.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK115]
Length = 207
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAIFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K SLS
Sbjct: 72 RARQGSIRSPQWRGGGIVFGPTPRSYAYKLPRKVRRLALKSVYSEKVAENKFVAVDSLS- 130
Query: 229 FLRPSFS-----LSLKNTDTHVHIV 248
F P + L+ + DT V ++
Sbjct: 131 FTAPKTAEFAKVLAALSIDTKVLVI 155
>gi|407278740|ref|ZP_11107210.1| 50S ribosomal protein L4 [Rhodococcus sp. P14]
gi|452954079|gb|EME59484.1| 50S ribosomal protein L4 [Rhodococcus ruber BKS 20-38]
Length = 227
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 83/135 (61%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + G + L ++FD P ++H+VV QLA +QGTH+TKT EV G G
Sbjct: 10 LTLDVKAPGGQTNGTVDLPAEIFDAPANIALLHQVVVAQLAAARQGTHATKTRGEVRGGG 69
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KP+RQKGTGRAR G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS RA
Sbjct: 70 RKPYRQKGTGRARQGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARNE 129
Query: 219 KVSLSVSLSLFLRPS 233
++ + L PS
Sbjct: 130 RIHVITELVAGQAPS 144
>gi|160914558|ref|ZP_02076773.1| hypothetical protein EUBDOL_00564 [Eubacterium dolichum DSM 3991]
gi|158433716|gb|EDP12005.1| 50S ribosomal protein L4 [Eubacterium dolichum DSM 3991]
Length = 209
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 72/109 (66%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
+ LA VF + + I + Q A +QGTH TK +EVSG G+KPWRQKGTGRAR G
Sbjct: 17 ITLADSVFGIEPNQQCIFDAIVMQRASVRQGTHDTKNRTEVSGGGRKPWRQKGTGRARQG 76
Query: 174 TLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
++R Q+RGG + GP PRS++ KLNKKVRRL LK LS + E +S+
Sbjct: 77 SIRATQWRGGGIVFGPTPRSYSYKLNKKVRRLALKSVLSEKVLENAMSV 125
>gi|339639999|ref|ZP_08661443.1| 50S ribosomal protein L4 [Streptococcus sp. oral taxon 056 str.
F0418]
gi|339453268|gb|EGP65883.1| 50S ribosomal protein L4 [Streptococcus sp. oral taxon 056 str.
F0418]
Length = 207
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAIFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K SLS
Sbjct: 72 RARQGSIRSPQWRGGGVVFGPTPRSYAYKLPRKVRRLALKSVYSKKVAENKFVAVDSLS- 130
Query: 229 FLRPSFS-----LSLKNTDTHVHIV 248
F P + L+ + DT V ++
Sbjct: 131 FTAPKTAEFAKVLAALSIDTKVLVI 155
>gi|332669518|ref|YP_004452526.1| 50S ribosomal protein L4/L1e [Cellulomonas fimi ATCC 484]
gi|332338556|gb|AEE45139.1| ribosomal protein L4/L1e [Cellulomonas fimi ATCC 484]
Length = 229
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 83/145 (57%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + + G L DVFDV +IH+VV QLA +QGTH TKT EV G G
Sbjct: 5 LTVDVLDPQGKKAGQAELPADVFDVQTNVPLIHQVVVAQLAAARQGTHDTKTRGEVRGGG 64
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP++QKGTGRAR G+ R PQF GG +HGP PR + + KK++ L+ ALS RA G
Sbjct: 65 KKPYKQKGTGRARQGSTRAPQFAGGGVVHGPTPRDYTQRTPKKMKAAALRGALSDRARAG 124
Query: 219 KVSLSVSLSLFLRPSFSLSLKNTDT 243
+V + + PS +L D
Sbjct: 125 RVHVVSGFAPGTAPSTKSALAVLDN 149
>gi|320352918|ref|YP_004194257.1| 50S ribosomal protein L4P [Desulfobulbus propionicus DSM 2032]
gi|320121420|gb|ADW16966.1| LSU ribosomal protein L4P [Desulfobulbus propionicus DSM 2032]
Length = 207
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 76/120 (63%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N E G + L +F++ + I+H VV Q A R+ G TKT EVSG G KPW
Sbjct: 6 IYNTRAEKVGEIDLNESLFNLEVNTGILHEVVCMQRANRRSGNACTKTRGEVSGGGAKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
RQKGTGRAR G+ P +RGG T+ GPKPR ++ + KKV+RL LK+A+SAR EG + +
Sbjct: 66 RQKGTGRARSGSRTSPVWRGGGTVFGPKPRDYSYSMPKKVKRLALKMAMSARCQEGNIVI 125
>gi|260886877|ref|ZP_05898140.1| ribosomal protein L4/L1 family protein [Selenomonas sputigena ATCC
35185]
gi|330839325|ref|YP_004413905.1| ribosomal protein L4/L1e [Selenomonas sputigena ATCC 35185]
gi|402832964|ref|ZP_10881587.1| 50S ribosomal protein L4 [Selenomonas sp. CM52]
gi|260863476|gb|EEX77976.1| ribosomal protein L4/L1 family protein [Selenomonas sputigena ATCC
35185]
gi|329747089|gb|AEC00446.1| ribosomal protein L4/L1e [Selenomonas sputigena ATCC 35185]
gi|402281707|gb|EJU30333.1| 50S ribosomal protein L4 [Selenomonas sp. CM52]
Length = 207
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 77/118 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N N+ G + L VF V + ++H+ V QLA R+ GTH+TKT V G G+K
Sbjct: 4 VAVYNSANQQVGDIELNDSVFGVEMNAGLVHQAVVMQLASRRLGTHATKTRGLVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
PWRQKGTGRAR G+ R P + GG T+ GP+PRS+A ++ KK RRL +K ALS + A G
Sbjct: 64 PWRQKGTGRARSGSTRSPLWVGGGTVFGPQPRSYAFRMPKKQRRLAIKCALSDKVASG 121
>gi|322386353|ref|ZP_08059983.1| 50S ribosomal protein L4 [Streptococcus cristatus ATCC 51100]
gi|417921214|ref|ZP_12564708.1| 50S ribosomal protein L4 [Streptococcus cristatus ATCC 51100]
gi|321269577|gb|EFX52507.1| 50S ribosomal protein L4 [Streptococcus cristatus ATCC 51100]
gi|342834798|gb|EGU69061.1| 50S ribosomal protein L4 [Streptococcus cristatus ATCC 51100]
Length = 207
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVVLNDAIFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K SLS
Sbjct: 72 RARQGSIRSPQWRGGGIVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAENKFVAVDSLS- 130
Query: 229 FLRPSFS-----LSLKNTDTHVHIV 248
F P + L+ + DT V ++
Sbjct: 131 FTAPKTAEFAKVLAALSIDTKVLVI 155
>gi|307946287|ref|ZP_07661622.1| ribosomal protein, L4/L1 family [Roseibium sp. TrichSKD4]
gi|307769951|gb|EFO29177.1| ribosomal protein, L4/L1 family [Roseibium sp. TrichSKD4]
Length = 206
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 72/104 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + ++ ++F + R D+IHRVVRWQLAKRQ GTH T SEV+GT KK RQKG+G AR
Sbjct: 14 GSITVSDEIFGLEPRTDLIHRVVRWQLAKRQAGTHKTLQRSEVTGTTKKFVRQKGSGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
HG + PQFRGG GP R H+ L KKVR LGLK LSA+A
Sbjct: 74 HGNRKAPQFRGGGKAFGPIVRDHSHDLPKKVRVLGLKHVLSAKA 117
>gi|172056141|ref|YP_001812601.1| 50S ribosomal protein L4 [Exiguobacterium sibiricum 255-15]
gi|407475994|ref|YP_006789871.1| 50S ribosomal protein L4 [Exiguobacterium antarcticum B7]
gi|226730665|sp|B1YGV1.1|RL4_EXIS2 RecName: Full=50S ribosomal protein L4
gi|171988662|gb|ACB59584.1| ribosomal protein L4/L1e [Exiguobacterium sibiricum 255-15]
gi|407060073|gb|AFS69263.1| 50S ribosomal protein L4 [Exiguobacterium antarcticum B7]
Length = 207
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 75/108 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + LA VF + + +++ + Q A R+QGTH TK SEV G G+KPW+QKGTGRAR
Sbjct: 15 GDIELADAVFGIEPNEAVVYDAIVMQQASRRQGTHDTKGRSEVRGGGRKPWKQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+ GG T+ GP PRS+A KL KKVRRL L+ ALS++ A +
Sbjct: 75 QGSIRSPQWVGGGTVFGPTPRSYAYKLPKKVRRLALRSALSSKVANNE 122
>gi|421239799|ref|ZP_15696352.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2080913]
gi|395610673|gb|EJG70749.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2080913]
Length = 207
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 74/111 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL+ VF + K ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLSDAVFGIEPNKSVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK S + AE K
Sbjct: 72 RARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSEKVAENK 122
>gi|259047554|ref|ZP_05737955.1| 50S ribosomal protein L4 [Granulicatella adiacens ATCC 49175]
gi|259035745|gb|EEW37000.1| 50S ribosomal protein L4 [Granulicatella adiacens ATCC 49175]
Length = 207
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 91/151 (60%), Gaps = 9/151 (5%)
Query: 106 FFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
F +D G + L D+F + ++++ V Q A +QGTH+ K S VSG G+KPW
Sbjct: 6 LFKQDGTTNGEIELNSDIFGIEPNENVVFDAVIMQRASLRQGTHAVKNRSAVSGGGRKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
RQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS + + K+ +
Sbjct: 66 RQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLAIKSVLSQKVLDNKLVV 125
Query: 223 SVSLSLFLRP---SFS--LSLKNTDTHVHIV 248
+L F P F+ LS N DT V +V
Sbjct: 126 VEALQ-FDAPKTKEFAQVLSNLNVDTKVLVV 155
>gi|399889063|ref|ZP_10774940.1| 50S ribosomal protein L4 [Clostridium arbusti SL206]
Length = 206
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L+ ++F + D +H+VV QLA ++QG S KT SEVSG
Sbjct: 1 MPTVGLFNQEGKKVGDIELSTNIFGAEVNTDALHQVVVAQLANKRQGNQSAKTRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G KPWRQKGTGRAR G++R PQ+ G + PKPR + I + K +RR+ +K ALS++ AE
Sbjct: 61 GIKPWRQKGTGRARQGSIRSPQWIHGGIVFAPKPRDYRISVPKSMRRVAMKSALSSKVAE 120
Query: 218 GKVSLSVSLSL 228
++ + L L
Sbjct: 121 NEIIVLEGLEL 131
>gi|333396606|ref|ZP_08478423.1| 50S ribosomal protein L4 [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
gi|336392484|ref|ZP_08573883.1| 50S ribosomal protein L4 [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
gi|420146293|ref|ZP_14653721.1| 50S ribosomal protein L4 [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398402024|gb|EJN55423.1| 50S ribosomal protein L4 [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 207
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 89/150 (59%), Gaps = 7/150 (4%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +D G + L D+F + +++ + Q A +QGTH+ K S V G
Sbjct: 1 MPNVALYKQDGSQNGDVQLNDDIFGIAPNDNVVFDAIIMQRASLRQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS + +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSQKVID 120
Query: 218 GKVSLSVSLSLFLRPS---FSLSLKNTDTH 244
G + + + S F +P F+ SLK+ D
Sbjct: 121 GNIIVVDAFS-FEQPKTKLFAESLKSLDVQ 149
>gi|158424177|ref|YP_001525469.1| 50S ribosomal protein L4 [Azorhizobium caulinodans ORS 571]
gi|158331066|dbj|BAF88551.1| ribosomal protein L4/L1e [Azorhizobium caulinodans ORS 571]
Length = 207
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 75/117 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V + G + L+ +F + R DI+HR+V WQLA+RQ GTH TK SE++ T
Sbjct: 2 MELTVKTLDGAEAGSIQLSDAIFGLEPRADILHRMVTWQLARRQAGTHRTKGRSEINRTS 61
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
KK ++QKGTG ARHG PQFRGG GP RSHA L KKVR L LK ALS++A
Sbjct: 62 KKLYKQKGTGNARHGAASAPQFRGGGRAFGPVVRSHAFDLPKKVRALALKHALSSKA 118
>gi|421489340|ref|ZP_15936722.1| 50S ribosomal protein L4 [Streptococcus oralis SK304]
gi|400365972|gb|EJP19014.1| 50S ribosomal protein L4 [Streptococcus oralis SK304]
Length = 207
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 72/108 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL +F + + ++ V+ Q A +QGTH K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLNDAIFGIEPNQSVVFDVIISQRASLRQGTHEVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG T+ GP PRS+A KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGTVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAENK 122
>gi|450088768|ref|ZP_21854928.1| 50S ribosomal protein L4 [Streptococcus mutans NV1996]
gi|449216262|gb|EMC16396.1| 50S ribosomal protein L4 [Streptococcus mutans NV1996]
Length = 207
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G + L +FD+ + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVTLNDAIFDIEPNESVVFDVIISQRANLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK SA+ A+ K +LS
Sbjct: 72 RARQGSIRAPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEKFVAVDALS- 130
Query: 229 FLRP---SFS--LSLKNTDTHVHIV 248
F P F+ L+ N D+ V ++
Sbjct: 131 FEAPKTKEFATVLAALNVDSKVLVI 155
>gi|403385667|ref|ZP_10927724.1| 50S ribosomal protein L4 [Kurthia sp. JC30]
Length = 207
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 77/117 (65%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F + + ++ + Q A +QGTH TK SEVSG G+KPWRQKGTGRAR
Sbjct: 15 GEIELNDAIFGIEPNESVLFDAIVAQRASLRQGTHKTKGRSEVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
G++R PQ+RGG + GP PRS+A KL KKVRRL LK ALS + AE + +L+L
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRSYAYKLPKKVRRLALKSALSTKVAETNFVVVDALTL 131
>gi|315605900|ref|ZP_07880931.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312182|gb|EFU60268.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 216
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 89/144 (61%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ D + V + + G + L G +FDVP ++H+VV QLA +QGTH+TKT +V
Sbjct: 3 MADDRNVDVIDLTGKKVGSVSLPGSIFDVPTNIPLMHQVVVAQLAAARQGTHATKTRGQV 62
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+G GKKP+RQKGTG AR G++R P F GG +HGP+PR + + KK+++ L+ ALS R
Sbjct: 63 AGGGKKPFRQKGTGNARQGSIRAPHFTGGGIVHGPQPRDYDQRTPKKMKQGALRSALSDR 122
Query: 215 AAEGKVSLSVSLSLFLRPSFSLSL 238
A ++ + +L +PS +L
Sbjct: 123 ARADRIHVVTALFEGEKPSTKAAL 146
>gi|225020387|ref|ZP_03709579.1| hypothetical protein CORMATOL_00394 [Corynebacterium matruchotii
ATCC 33806]
gi|305679737|ref|ZP_07402547.1| 50S ribosomal protein L4 [Corynebacterium matruchotii ATCC 14266]
gi|224946776|gb|EEG27985.1| hypothetical protein CORMATOL_00394 [Corynebacterium matruchotii
ATCC 33806]
gi|305660357|gb|EFM49854.1| 50S ribosomal protein L4 [Corynebacterium matruchotii ATCC 14266]
Length = 216
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 84/140 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V G + L ++FD + ++H+VV QLA R+QGTHSTKT EV G G
Sbjct: 4 LTLDVQTAAGSTAGQVELPAEIFDREVSISLLHQVVNAQLAARRQGTHSTKTRGEVRGGG 63
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTGRAR G++R P F GG HGPKPR+++ + KK+ + L ALS RA
Sbjct: 64 KKPFRQKGTGRARQGSIRAPHFTGGGISHGPKPRNYSQRTPKKMIKAALYGALSDRARHA 123
Query: 219 KVSLSVSLSLFLRPSFSLSL 238
++ + L +PS +L
Sbjct: 124 RIHVVDELVAGQKPSTKSAL 143
>gi|329850208|ref|ZP_08265053.1| 50S ribosomal protein L4 [Asticcacaulis biprosthecum C19]
gi|328840523|gb|EGF90094.1| 50S ribosomal protein L4 [Asticcacaulis biprosthecum C19]
Length = 210
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 76/108 (70%), Gaps = 1/108 (0%)
Query: 112 GFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L+ VF + IR DI+HRVV WQLAKR+ GTH +T +E S TGKK ++QKG+G A
Sbjct: 14 GSVELSDLVFGISDIRADILHRVVNWQLAKRRAGTHKVQTRNENSRTGKKMYKQKGSGGA 73
Query: 171 RHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
RHG+ R PQF GG+ GP RSHA L KKVR LGL+ ALS++ +G
Sbjct: 74 RHGSRRAPQFVGGSRAFGPVVRSHAFDLPKKVRALGLRHALSSKVKDG 121
>gi|398813175|ref|ZP_10571877.1| 50S ribosomal protein L4, bacterial/organelle [Brevibacillus sp.
BC25]
gi|398039336|gb|EJL32474.1| 50S ribosomal protein L4, bacterial/organelle [Brevibacillus sp.
BC25]
Length = 207
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 7/157 (4%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + LA VF + +++ + Q A ++QGTH K SEV G
Sbjct: 1 MPKVALYNQSGSQVGEIDLADSVFGIEPNSAVLYDAIVMQQASQRQGTHDVKNRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ++GG + GP PR + KLN+KVRRL LK ALSA+
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWKGGGVVFGPTPRKYGYKLNRKVRRLALKSALSAKVQS 120
Query: 218 GKVSLSVSLSLFL--RPSFSLSLKN--TDTHVHIVSS 250
++ + +L++ ++ L N D V IV+S
Sbjct: 121 NEILVLEALNIAAPKTKEMTVVLNNLKADRKVLIVTS 157
>gi|358066907|ref|ZP_09153396.1| 50S ribosomal protein L4 [Johnsonella ignava ATCC 51276]
gi|356694946|gb|EHI56598.1| 50S ribosomal protein L4 [Johnsonella ignava ATCC 51276]
Length = 206
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 76/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G M L +F + + + I+H V LA ++QGT KT EV G G+K
Sbjct: 4 VSVYDIEGKEVGDMELNDAIFGIEVNEHIVHMAVVAHLANKRQGTQKAKTRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G++R PQ++GG + P PR ++IKLNKK RRL LK AL++R + K
Sbjct: 64 PWRQKGTGHARQGSIRSPQWKGGGVVFAPTPRDYSIKLNKKERRLALKSALTSRVNDNK 122
>gi|126732273|ref|ZP_01748073.1| 50S ribosomal protein L4 [Sagittula stellata E-37]
gi|126707142|gb|EBA06208.1| 50S ribosomal protein L4 [Sagittula stellata E-37]
Length = 205
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 76/120 (63%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V N G + L +F + R DI+HRVVRWQ K Q GTH KT SEVS +
Sbjct: 1 MKLDVINLDGGSAGEVELDEALFGLEPRADILHRVVRWQRNKAQAGTHKVKTRSEVSYST 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK +RQKGTG ARHG+ + P FR G GP PRSHA +L KKVR LGLK+ALS +A G
Sbjct: 61 KKIYRQKGTGGARHGSRKAPIFRKGGIYKGPTPRSHAHELPKKVRALGLKMALSDKARNG 120
>gi|227487122|ref|ZP_03917438.1| 50S ribosomal protein L4 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227092780|gb|EEI28092.1| 50S ribosomal protein L4 [Corynebacterium glucuronolyticum ATCC
51867]
Length = 226
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 84/136 (61%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+LV+ V + G + L ++FD + ++H+VV QLA +QGTHSTKT EVSG
Sbjct: 3 NLVLDVHTADGKTDGTVELPAELFDRKVSVALLHQVVNAQLAGARQGTHSTKTRGEVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKP+RQKGTGRAR G++R P F GG HGPKPR ++ + KK++ L ALS RA
Sbjct: 63 GKKPFRQKGTGRARQGSIRAPHFTGGGIAHGPKPRDYSQRTPKKMKAAALLGALSNRART 122
Query: 218 GKVSLSVSLSLFLRPS 233
G++ + +PS
Sbjct: 123 GRIHAITEVVAGQKPS 138
>gi|171778376|ref|ZP_02919555.1| hypothetical protein STRINF_00406 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|288904274|ref|YP_003429495.1| 50S ribosomal protein L4 [Streptococcus gallolyticus UCN34]
gi|325977253|ref|YP_004286969.1| 50S ribosomal protein L4 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|374337088|ref|YP_005093786.1| 50S ribosomal protein L4 [Streptococcus macedonicus ACA-DC 198]
gi|379704438|ref|YP_005202897.1| 50S ribosomal protein L4 [Streptococcus infantarius subsp.
infantarius CJ18]
gi|386336740|ref|YP_006032909.1| 50S ribosomal protein L4 [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|171282907|gb|EDT48331.1| 50S ribosomal protein L4 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|288730999|emb|CBI12543.1| ribosomal protein L4 [Streptococcus gallolyticus UCN34]
gi|325177181|emb|CBZ47225.1| 50S ribosomal protein L4 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334279376|dbj|BAK26950.1| 50S ribosomal protein L4 [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|372283186|emb|CCF01342.1| LSU ribosomal protein L4p (L1e) [Streptococcus macedonicus ACA-DC
198]
gi|374681137|gb|AEZ61426.1| ribosomal protein L4 [Streptococcus infantarius subsp. infantarius
CJ18]
Length = 207
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 82/134 (61%), Gaps = 6/134 (4%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS---- 235
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K SLS F P +
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVESLS-FAAPKTAEFAN 141
Query: 236 -LSLKNTDTHVHIV 248
LS N D+ V ++
Sbjct: 142 VLSALNVDSKVLVI 155
>gi|404424713|ref|ZP_11006267.1| 50S ribosomal protein L4 [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
gi|403650611|gb|EJZ05832.1| 50S ribosomal protein L4 [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
Length = 215
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 77/117 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + G + L +FDV ++H+VV QLA ++QGTHSTKT EVSG G
Sbjct: 3 LKIDVKTPAGKKDGSIELPAALFDVEPNIALMHQVVNAQLAAKRQGTHSTKTRGEVSGGG 62
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
KKP+RQKGTGRAR G+ R PQF GG T+HGP+PR ++ + KK+ L+ ALS RA
Sbjct: 63 KKPYRQKGTGRARQGSTRAPQFTGGGTVHGPQPRDYSQRTPKKMIAAALRGALSDRA 119
>gi|384106917|ref|ZP_10007821.1| 50S ribosomal protein L4 [Rhodococcus imtechensis RKJ300]
gi|383833368|gb|EID72831.1| 50S ribosomal protein L4 [Rhodococcus imtechensis RKJ300]
Length = 229
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 79/122 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTH+TKT EV G GKKP+RQKGTGRAR
Sbjct: 24 GTVDLPPEIFDAPANIALLHQVVVAQLAAARQGTHATKTRGEVRGGGKKPYRQKGTGRAR 83
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS RA ++ + L
Sbjct: 84 QGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARNERIHVITELVAGQT 143
Query: 232 PS 233
PS
Sbjct: 144 PS 145
>gi|291562767|emb|CBL41583.1| LSU ribosomal protein L4P [butyrate-producing bacterium SS3/4]
Length = 206
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 74/119 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGTIELNDAVFGVEVNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PR + I LNKK +R LK AL++R E K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGMVFAPTPRDYTITLNKKEKRAALKSALTSRVNENK 122
>gi|306832548|ref|ZP_07465688.1| ribosomal protein L4/L1 family protein [Streptococcus bovis ATCC
700338]
gi|336063414|ref|YP_004558273.1| 50S ribosomal protein L4 [Streptococcus pasteurianus ATCC 43144]
gi|304425306|gb|EFM28432.1| ribosomal protein L4/L1 family protein [Streptococcus bovis ATCC
700338]
gi|334281614|dbj|BAK29187.1| 50S ribosomal protein L4 [Streptococcus pasteurianus ATCC 43144]
Length = 207
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 82/134 (61%), Gaps = 6/134 (4%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS---- 235
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K SLS F P +
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVESLS-FTAPKTAEFAN 141
Query: 236 -LSLKNTDTHVHIV 248
LS N D+ V ++
Sbjct: 142 VLSALNVDSKVLVI 155
>gi|160894755|ref|ZP_02075530.1| hypothetical protein CLOL250_02306 [Clostridium sp. L2-50]
gi|156863689|gb|EDO57120.1| 50S ribosomal protein L4 [Clostridium sp. L2-50]
Length = 206
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 72/105 (68%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L VF V I + ++H V Q A +QGT S KT SEVSG G+KPWRQKGTG AR G+
Sbjct: 19 LNDSVFGVEINEHLMHLAVVGQQANSRQGTQSAKTRSEVSGGGRKPWRQKGTGHARQGST 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
R PQ+ GG + PKPR +++K+NKK ++L +K ALSA+ AE K+
Sbjct: 79 RSPQWTGGGVVFAPKPRDYSVKMNKKEKQLAMKSALSAKLAEDKL 123
>gi|421205633|ref|ZP_15662700.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2090008]
gi|421228894|ref|ZP_15685572.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2061376]
gi|421291022|ref|ZP_15741766.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA56348]
gi|421310919|ref|ZP_15761532.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA58981]
gi|395578054|gb|EJG38582.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2090008]
gi|395598561|gb|EJG58762.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2061376]
gi|395896822|gb|EJH07787.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA56348]
gi|395913879|gb|EJH24728.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA58981]
Length = 207
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 74/111 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK+ S + AE K
Sbjct: 72 RARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKLVYSEKVAENK 122
>gi|333991977|ref|YP_004524591.1| 50S ribosomal protein L4 [Mycobacterium sp. JDM601]
gi|333487945|gb|AEF37337.1| 50S ribosomal protein L4 RplD [Mycobacterium sp. JDM601]
Length = 225
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 82/135 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + + G + L ++FD P ++H+VV QLA +QGTHSTKT EV G G
Sbjct: 9 LKIDVKSPDGKKSGSVELPAELFDAPANIALMHQVVIAQLAAARQGTHSTKTRGEVRGGG 68
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KP+RQKGTGRAR G+ R PQF GG +HGPKPR ++ + KK+ L+ ALS RA G
Sbjct: 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
Query: 219 KVSLSVSLSLFLRPS 233
++ L PS
Sbjct: 129 RIHAVTELVSGQTPS 143
>gi|218135280|ref|ZP_03464084.1| hypothetical protein BACPEC_03185 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990665|gb|EEC56676.1| 50S ribosomal protein L4 [[Bacteroides] pectinophilus ATCC 43243]
Length = 206
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 84/142 (59%), Gaps = 2/142 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L +F V I + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGSLELNDAIFGVEINEHLVHMAVVQQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ+ GG + P PR ++ K+NKK +R LK AL++R + K+
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPTPRDYSFKMNKKEKRAALKSALTSRVVDSKI 123
Query: 221 SL--SVSLSLFLRPSFSLSLKN 240
+ + + +F+ +KN
Sbjct: 124 VVLDEIKFNEIKTKNFANVMKN 145
>gi|227497182|ref|ZP_03927430.1| ribosomal protein L4 [Actinomyces urogenitalis DSM 15434]
gi|226833313|gb|EEH65696.1| ribosomal protein L4 [Actinomyces urogenitalis DSM 15434]
Length = 214
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 85/140 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + + + + G L ++FDV ++H+VV QLA +QGTH+TKT V G G
Sbjct: 5 LTVDIVDSKGKKTGSAELPAEIFDVETNIPLMHQVVVAQLAAARQGTHATKTRGAVRGGG 64
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KP+RQKGTGRAR G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS RA G
Sbjct: 65 RKPYRQKGTGRARQGSTRAPQFVGGGTVHGPQPRDYSQRTPKKMKAAALRSALSDRARNG 124
Query: 219 KVSLSVSLSLFLRPSFSLSL 238
++ + +PS +L
Sbjct: 125 RIHVITEFVTSEKPSTKSAL 144
>gi|320548054|ref|ZP_08042334.1| 50S ribosomal protein L4 [Streptococcus equinus ATCC 9812]
gi|320447296|gb|EFW88059.1| 50S ribosomal protein L4 [Streptococcus equinus ATCC 9812]
Length = 207
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 82/134 (61%), Gaps = 6/134 (4%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS---- 235
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K SLS F P +
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEEKFVAVESLS-FAAPKTAEFAN 141
Query: 236 -LSLKNTDTHVHIV 248
LS N D+ V ++
Sbjct: 142 VLSALNVDSKVLVI 155
>gi|254502843|ref|ZP_05114994.1| ribosomal protein L4/L1 family [Labrenzia alexandrii DFL-11]
gi|222438914|gb|EEE45593.1| ribosomal protein L4/L1 family [Labrenzia alexandrii DFL-11]
Length = 206
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 72/104 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + ++ ++F + R D+IHRVVRWQLAKRQ GTH T SEV+G+ KK RQKG+G AR
Sbjct: 14 GSITVSDEIFGLDPRTDLIHRVVRWQLAKRQAGTHKTLGRSEVTGSTKKFVRQKGSGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
HG + PQFRGG GP R H L KKVR LGLK ALSA+A
Sbjct: 74 HGNKKAPQFRGGGRAFGPVVRDHGHDLPKKVRVLGLKHALSAKA 117
>gi|334336187|ref|YP_004541339.1| 50S ribosomal protein L4 [Isoptericola variabilis 225]
gi|334106555|gb|AEG43445.1| ribosomal protein L4/L1e [Isoptericola variabilis 225]
Length = 235
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 91/155 (58%), Gaps = 5/155 (3%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + + G L +VFDV +IH+VV Q A +QGTH+TKT +V G GKK
Sbjct: 6 VDVLDATGKKAGTAELPAEVFDVVTNVPLIHQVVVAQRAAARQGTHATKTRGDVRGGGKK 65
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P++QKGTGRAR G+ R PQF GG T+HGP+PR + + KK++ L+ ALS RA G+V
Sbjct: 66 PYKQKGTGRARQGSTRAPQFAGGGTVHGPQPRKYDQRTPKKMKAAALRGALSDRARAGRV 125
Query: 221 SLSVSLSLFLRPSFSLSLKN----TD-THVHIVSS 250
+ L PS ++ TD THV +V+
Sbjct: 126 HVVEGFGLDGAPSTKTAVATLEALTDRTHVLVVTE 160
>gi|83949794|ref|ZP_00958527.1| 50S ribosomal protein L4 [Roseovarius nubinhibens ISM]
gi|83837693|gb|EAP76989.1| 50S ribosomal protein L4 [Roseovarius nubinhibens ISM]
Length = 205
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 72/111 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+F + R DI+HRVVRWQ K QQGTH KT SE S + KK +RQKGTG AR
Sbjct: 14 GSVDLGEDIFGLEPRADILHRVVRWQRNKAQQGTHKVKTRSETSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
HG P FR G GP PRSHA L KKVR LGLK ALSA+ G++ +
Sbjct: 74 HGDRNAPIFRKGGIYKGPTPRSHAHDLPKKVRMLGLKHALSAKVKAGELVI 124
>gi|302388713|ref|YP_003824534.1| 50S ribosomal protein L4P [Thermosediminibacter oceani DSM 16646]
gi|302199341|gb|ADL06911.1| LSU ribosomal protein L4P [Thermosediminibacter oceani DSM 16646]
Length = 208
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 82/120 (68%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N + G + L+ VF V ++ +++H+VV LA ++ GT STKT +EV G G+K
Sbjct: 4 VALYNMQGQQVGEVELSDSVFGVEVKPEVMHQVVLNYLANQRVGTASTKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRARHG++R P +R G + GPKPRS+ L KK++RL LK ALSA+ + ++
Sbjct: 64 PWRQKGTGRARHGSIRSPLWRKGGIVFGPKPRSYKYTLPKKLKRLALKSALSAKVRDNEI 123
>gi|258651364|ref|YP_003200520.1| 50S ribosomal protein L4 [Nakamurella multipartita DSM 44233]
gi|258554589|gb|ACV77531.1| ribosomal protein L4/L1e [Nakamurella multipartita DSM 44233]
Length = 248
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 79/123 (64%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++F+VP ++H+VV QLA +QGTH KT EVSG GKKP+RQKGTGRAR G+
Sbjct: 19 LPDEIFNVPANVPLMHQVVVAQLAAARQGTHKAKTRGEVSGGGKKPYRQKGTGRARQGST 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS 235
R PQF GG +HGP PR + + KK++ L+ ALS RA G V + SLS+ PS
Sbjct: 79 RAPQFAGGGVVHGPLPRDYTQRTPKKMKAAALRGALSDRARGGNVHVLESLSVDGTPSTK 138
Query: 236 LSL 238
+L
Sbjct: 139 KAL 141
>gi|346312824|ref|ZP_08854359.1| 50S ribosomal protein L4 [Erysipelotrichaceae bacterium 2_2_44A]
gi|345905975|gb|EGX75709.1| 50S ribosomal protein L4 [Erysipelotrichaceae bacterium 2_2_44A]
Length = 209
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 78/138 (56%), Gaps = 8/138 (5%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
+ LA VF + + I V Q A +QGTH TK +EV G G+KPWRQKGTGRAR G
Sbjct: 17 ITLADTVFGIEPNQQCIFDAVIMQRASMRQGTHDTKNRTEVRGGGRKPWRQKGTGRARQG 76
Query: 174 TLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPS 233
++R Q+RGG + GP PR++ KLNKKVRRL LK ALS + E +S+
Sbjct: 77 SIRATQWRGGGIVFGPTPRNYGYKLNKKVRRLALKSALSEKVLENAMSVV--------DK 128
Query: 234 FSLSLKNTDTHVHIVSSI 251
F L T IV+ I
Sbjct: 129 FELEAPKTKAFNQIVADI 146
>gi|239623348|ref|ZP_04666379.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522314|gb|EEQ62180.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 206
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 75/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGTLELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ++GG + P PR + I+LNKK +R LK AL++R K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWKGGGVVFAPTPRDYTIRLNKKEKRAALKSALTSRVQANK 122
>gi|399055808|ref|ZP_10743458.1| 50S ribosomal protein L4, bacterial/organelle [Brevibacillus sp.
CF112]
gi|433543291|ref|ZP_20499701.1| 50S ribosomal protein L4 [Brevibacillus agri BAB-2500]
gi|398046671|gb|EJL39265.1| 50S ribosomal protein L4, bacterial/organelle [Brevibacillus sp.
CF112]
gi|432185420|gb|ELK42911.1| 50S ribosomal protein L4 [Brevibacillus agri BAB-2500]
Length = 207
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 9/158 (5%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + LA VF + +++ + Q A ++QGTH K SEV G
Sbjct: 1 MPKVALYNQTGSQVGEIELADSVFGIEPNNAVLYDAIVMQQASQRQGTHDVKNRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ++GG + GP PR + KLN+KVRRL LK ALSA+
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWKGGGVVFGPTPRKYGYKLNRKVRRLALKSALSAKVQN 120
Query: 218 GKVSLSVSLSLFLRP---SFSLSLKN--TDTHVHIVSS 250
++ + +L+ F P + L N D V IV+S
Sbjct: 121 NELLVLDALN-FAAPKTKEMTAVLNNLKVDRKVLIVTS 157
>gi|229489366|ref|ZP_04383229.1| ribosomal protein L4/L1 family protein [Rhodococcus erythropolis
SK121]
gi|453068364|ref|ZP_21971643.1| 50S ribosomal protein L4 [Rhodococcus qingshengii BKS 20-40]
gi|226184457|dbj|BAH32561.1| 50S ribosomal protein L4 [Rhodococcus erythropolis PR4]
gi|229323463|gb|EEN89221.1| ribosomal protein L4/L1 family protein [Rhodococcus erythropolis
SK121]
gi|452766014|gb|EME24265.1| 50S ribosomal protein L4 [Rhodococcus qingshengii BKS 20-40]
Length = 224
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 79/122 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT +V G GKKP+RQKGTGRAR
Sbjct: 21 GTVDLPAEIFDAPANIALLHQVVVAQLAAARQGTHSTKTRGDVRGGGKKPYRQKGTGRAR 80
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS RA ++ + L
Sbjct: 81 QGSTRAPQFVGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARNERIHVITELVAGQT 140
Query: 232 PS 233
PS
Sbjct: 141 PS 142
>gi|405761597|ref|YP_006702193.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPNA45]
gi|404278486|emb|CCM09106.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPNA45]
Length = 207
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 74/111 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL+ VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLSDAVFGIESNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK S + AE K
Sbjct: 72 RARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSEKVAENK 122
>gi|153854971|ref|ZP_01996184.1| hypothetical protein DORLON_02190 [Dorea longicatena DSM 13814]
gi|149752468|gb|EDM62399.1| 50S ribosomal protein L4 [Dorea longicatena DSM 13814]
Length = 206
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 85/144 (59%), Gaps = 2/144 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L+ VF V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGKIDLSDAVFGVEVNEHLVHMAVVSQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK- 219
PWRQKGTG AR G+ R PQ+ GG + P PR ++ K+NK+ +R LK AL++R E K
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPVPRDYSFKMNKREKRAALKSALTSRVEENKF 123
Query: 220 -VSLSVSLSLFLRPSFSLSLKNTD 242
V ++ +F+ LKN D
Sbjct: 124 IVIDEINFEEAKTKNFANILKNLD 147
>gi|295398289|ref|ZP_06808331.1| ribosomal protein L4/L1 family protein [Aerococcus viridans ATCC
11563]
gi|294973428|gb|EFG49213.1| ribosomal protein L4/L1 family protein [Aerococcus viridans ATCC
11563]
Length = 207
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 72/107 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +VF + ++ I+ VV Q A +QGTH K SEVSG G+KPWRQKGTGRAR
Sbjct: 15 GEITLNDEVFAIEPNENAIYDVVIMQQASLRQGTHKVKGRSEVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
G++R PQ+ GG GP PRS+A KL +KVRRL L+ ALS + AE
Sbjct: 75 QGSIRSPQWVGGGRAFGPTPRSYAYKLPRKVRRLALRSALSTKVAEN 121
>gi|154498884|ref|ZP_02037262.1| hypothetical protein BACCAP_02876 [Bacteroides capillosus ATCC
29799]
gi|150271724|gb|EDM98950.1| 50S ribosomal protein L4 [Pseudoflavonifractor capillosus ATCC
29799]
Length = 206
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 79/126 (62%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V + + G + L+ +F + ++H V+ LA +QGT S T +EVSG G KPW
Sbjct: 6 VVDMTGKKVGEVDLSDAIFGIEPNVSVVHEAVKNHLANCRQGTQSALTRAEVSGGGIKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
RQKGTGRAR G+ R PQ+ G + PKPR ++ LNKKV+RL LK ALSA+AAEG V +
Sbjct: 66 RQKGTGRARQGSTRAPQWTHGGVVFAPKPRDYSYTLNKKVKRLALKSALSAKAAEGNVIV 125
Query: 223 SVSLSL 228
L+L
Sbjct: 126 VDGLNL 131
>gi|269796254|ref|YP_003315709.1| 50S ribosomal protein L4P [Sanguibacter keddieii DSM 10542]
gi|269098439|gb|ACZ22875.1| LSU ribosomal protein L4P [Sanguibacter keddieii DSM 10542]
Length = 234
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 84/144 (58%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ + L + V + + G L +VFDV +IH+VV QLA +QGTH TK EV
Sbjct: 1 MSETLTVDVIDAKGKKAGTADLPAEVFDVQTNIPLIHQVVVAQLAAARQGTHDTKNRGEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G G+KP++QKGTGRAR G+ R PQF GG +HGP PR ++ + KK++ L+ ALS R
Sbjct: 61 RGGGRKPYKQKGTGRARQGSTRAPQFAGGGVVHGPTPRDYSQRTPKKMKAAALRGALSDR 120
Query: 215 AAEGKVSLSVSLSLFLRPSFSLSL 238
A G++ + + PS +L
Sbjct: 121 ARAGRIHVVTGFGIDGSPSTKQAL 144
>gi|352518454|ref|YP_004887771.1| 50S ribosomal protein L4 [Tetragenococcus halophilus NBRC 12172]
gi|348602561|dbj|BAK95607.1| 50S ribosomal protein L4 [Tetragenococcus halophilus NBRC 12172]
Length = 207
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 75/119 (63%), Gaps = 3/119 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L ++F + + ++ + Q A +QGTH+ K S VSG
Sbjct: 1 MPNVALFKQDGSQNGEVTLNEEIFGIEPNESVVFDAITMQRASLRQGTHAVKNRSAVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
GKKPWRQKGTGRAR GT+R PQ+RGG + GP PRS++ KL KKVRRL +K LS + A
Sbjct: 61 GKKPWRQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYSYKLPKKVRRLAIKSVLSEKVA 119
>gi|417938758|ref|ZP_12582052.1| 50S ribosomal protein L4 [Streptococcus infantis SK970]
gi|343390773|gb|EGV03352.1| 50S ribosomal protein L4 [Streptococcus infantis SK970]
Length = 207
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 73/108 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL+ +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLSDAIFGIEPNQSVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAENK 122
>gi|160941068|ref|ZP_02088406.1| hypothetical protein CLOBOL_05961 [Clostridium bolteae ATCC
BAA-613]
gi|158436017|gb|EDP13784.1| hypothetical protein CLOBOL_05961 [Clostridium bolteae ATCC
BAA-613]
Length = 206
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 76/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGALELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ++GG + P PR + I+LNKK +R L+ AL++R + K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWKGGGVVFAPTPRDYTIRLNKKEKRAALRSALTSRVQDNK 122
>gi|403669805|ref|ZP_10934981.1| 50S ribosomal protein L4 [Kurthia sp. JC8E]
Length = 207
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 72/106 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F + + ++ + Q A +QGTH TK SEVSG G+KPWRQKGTGRAR
Sbjct: 15 GEIELNDAIFGIEPNEAVLFDAIVAQRASLRQGTHKTKGRSEVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G++R PQ+RGG + GP PRS+A KL KKVRRL LK ALS + AE
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRSYAYKLPKKVRRLALKSALSTKVAE 120
>gi|158337811|ref|YP_001518987.1| 50S ribosomal protein L4 [Acaryochloris marina MBIC11017]
gi|359457979|ref|ZP_09246542.1| 50S ribosomal protein L4 [Acaryochloris sp. CCMEE 5410]
gi|189029488|sp|B0C1D4.1|RL4_ACAM1 RecName: Full=50S ribosomal protein L4
gi|158308052|gb|ABW29669.1| 50S ribosomal protein L4 [Acaryochloris marina MBIC11017]
Length = 210
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 76/115 (66%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V N+ ED G L V + I+HR +R Q+ +QGT S+KT SEV G G+KPW
Sbjct: 6 VRNWQGEDAGQAELDLKVANEENAAHIVHRALRRQMNNARQGTASSKTRSEVRGGGRKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
RQKGTGRAR G+ R P +RGG + GPKPRS++ K+N+K RRL L+ A ++RA +
Sbjct: 66 RQKGTGRARAGSSRSPLWRGGGVIFGPKPRSYSTKMNRKERRLALRTAFASRAED 120
>gi|406578167|ref|ZP_11053708.1| 50S ribosomal protein L4 [Streptococcus sp. GMD6S]
gi|404458044|gb|EKA04510.1| 50S ribosomal protein L4 [Streptococcus sp. GMD6S]
Length = 207
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 87/145 (60%), Gaps = 6/145 (4%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLNDAVFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK S + AE K +LS
Sbjct: 72 RARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSIYSEKVAENKFVAVDALS- 130
Query: 229 FLRPSFS-----LSLKNTDTHVHIV 248
F P + L+ N D+ V ++
Sbjct: 131 FTAPKTAEFAKVLAALNIDSKVLVI 155
>gi|224370690|ref|YP_002604854.1| 50S ribosomal protein L4 [Desulfobacterium autotrophicum HRM2]
gi|259491553|sp|C0Q9X2.1|RL4_DESAH RecName: Full=50S ribosomal protein L4
gi|223693407|gb|ACN16690.1| RplD [Desulfobacterium autotrophicum HRM2]
Length = 207
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 82/122 (67%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E LA +VF +P++K ++H VVR QLA+R+ GT +K SEVSG+ +K
Sbjct: 4 VDVLNRSGEKVSEAFLADEVFSIPVKKSVLHDVVRMQLARRRSGTAKSKGRSEVSGSTRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
+RQKGTG AR G+++ P RGG + GP PRS+A + KKVR L LK+ALS++ A ++
Sbjct: 64 LYRQKGTGNARSGSVKSPLRRGGGVIFGPAPRSYAYAIPKKVRALALKMALSSKLAANEL 123
Query: 221 SL 222
S+
Sbjct: 124 SV 125
>gi|227509932|ref|ZP_03939981.1| 50S ribosomal protein L4 [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227190538|gb|EEI70605.1| 50S ribosomal protein L4 [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 207
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L DVF + +++ V Q A R+QGTHS K S V G GKKPWRQKGTGRAR
Sbjct: 15 GTVSLNDDVFGIEPNNNVVFDAVVMQRASRRQGTHSVKNRSAVRGGGKKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G++R PQ+RGG + GP PRS+A L KKV RL LK LS + A+ K+ + SL +F
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRSYAYHLPKKVSRLALKSVLSEKVADEKLVVVDSL-VFET 133
Query: 232 P 232
P
Sbjct: 134 P 134
>gi|81642546|sp|Q6AP70.1|RL4_DESPS RecName: Full=50S ribosomal protein L4
gi|50876014|emb|CAG35854.1| probable 50S ribosomal protein L4 [Desulfotalea psychrophila LSv54]
Length = 211
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 77/120 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N NE + L +F+ +++ I+H VVR Q A ++ GT STKT EV G G K
Sbjct: 8 VSVVNTNNEKVDEIELNDAIFNREVKEYILHDVVRMQRAAKRAGTASTKTRVEVRGGGAK 67
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ P +RGG GPKPR ++ KLN+KVR+ + +ALSAR EG +
Sbjct: 68 PWRQKGTGRARAGSRTSPLWRGGGVTFGPKPRDYSFKLNRKVRQQAVSMALSARFQEGNL 127
>gi|403238407|ref|ZP_10916993.1| 50S ribosomal protein L4 [Bacillus sp. 10403023]
Length = 207
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 79/123 (64%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +N+ G + L VF + + ++ V Q A +QGTH TK SEV+G
Sbjct: 1 MPKVSLYNQTGSSVGEIELNDSVFGIEPNQQVLFDAVIMQRASLRQGTHKTKIRSEVAGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS + E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYSYKLPKKVRRLAIKSALSTKVLE 120
Query: 218 GKV 220
+
Sbjct: 121 ENI 123
>gi|161485627|ref|YP_064861.2| 50S ribosomal protein L4 [Desulfotalea psychrophila LSv54]
Length = 207
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 77/120 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N NE + L +F+ +++ I+H VVR Q A ++ GT STKT EV G G K
Sbjct: 4 VSVVNTNNEKVDEIELNDAIFNREVKEYILHDVVRMQRAAKRAGTASTKTRVEVRGGGAK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ P +RGG GPKPR ++ KLN+KVR+ + +ALSAR EG +
Sbjct: 64 PWRQKGTGRARAGSRTSPLWRGGGVTFGPKPRDYSFKLNRKVRQQAVSMALSARFQEGNL 123
>gi|414075115|ref|YP_007000332.1| 50S ribosomal protein L4 [Lactococcus lactis subsp. cremoris
UC509.9]
gi|413975035|gb|AFW92499.1| 50S ribosomal protein L4 [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 208
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 77/119 (64%), Gaps = 3/119 (2%)
Query: 105 NFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ F +D G + L VF + + ++ VV Q A +QGTH+ K S VSG GKKP
Sbjct: 5 SLFKQDGSQAGEVTLNDSVFGIEPNESVVFDVVISQRASLRQGTHAHKNRSAVSGGGKKP 64
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
WRQKGTGRAR G+ R PQ+RGG T+ GP PRS+A KL +KVR+L LK S + A+GK+
Sbjct: 65 WRQKGTGRARQGSTRSPQWRGGGTVFGPNPRSYAYKLPQKVRQLALKSVYSTKVADGKL 123
>gi|253681900|ref|ZP_04862697.1| ribosomal protein, L4 [Clostridium botulinum D str. 1873]
gi|416350125|ref|ZP_11680767.1| 50S ribosomal protein L4 [Clostridium botulinum C str. Stockholm]
gi|253561612|gb|EES91064.1| ribosomal protein, L4 [Clostridium botulinum D str. 1873]
gi|338196362|gb|EGO88559.1| 50S ribosomal protein L4 [Clostridium botulinum C str. Stockholm]
Length = 206
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +N + G + LA VF V + D++H+VV QLA ++QGT S KT +EVSG
Sbjct: 1 MPTVDLYNREGQKVGDLQLAEAVFAVEVNADVLHQVVVAQLANKRQGTQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRAR G++R PQ+ G + PKPR + + + K ++R+ +K AL+++ +
Sbjct: 61 GKKPWRQKGTGRARQGSIRAPQWIHGGIVFAPKPRDYRMAIPKSMKRVAMKSALTSKVND 120
Query: 218 GKVSLSVSLSL 228
++ + +L L
Sbjct: 121 QELVVLENLEL 131
>gi|15674080|ref|NP_268255.1| 50S ribosomal protein L4 [Lactococcus lactis subsp. lactis Il1403]
gi|281492758|ref|YP_003354738.1| 50S ribosomal protein L1E (= L4P) [Lactococcus lactis subsp. lactis
KF147]
gi|385831623|ref|YP_005869436.1| 50S ribosomal protein L4 [Lactococcus lactis subsp. lactis CV56]
gi|418037375|ref|ZP_12675757.1| hypothetical protein LLCRE1631_00564 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|46577289|sp|Q9CDW3.1|RL4_LACLA RecName: Full=50S ribosomal protein L4
gi|12725152|gb|AAK06196.1|AE006438_10 50S ribosomal protein L4 [Lactococcus lactis subsp. lactis Il1403]
gi|281376410|gb|ADA65896.1| LSU ribosomal protein L1E (= L4P) [Lactococcus lactis subsp. lactis
KF147]
gi|326407631|gb|ADZ64702.1| 50S ribosomal protein L4 [Lactococcus lactis subsp. lactis CV56]
gi|354694647|gb|EHE94295.1| hypothetical protein LLCRE1631_00564 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|374674185|dbj|BAL52076.1| 50S ribosomal protein L4 [Lactococcus lactis subsp. lactis IO-1]
Length = 208
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 77/119 (64%), Gaps = 3/119 (2%)
Query: 105 NFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ F +D G + L VF + + ++ VV Q A +QGTH+ K S VSG GKKP
Sbjct: 5 SLFKQDGSQAGEVTLNDSVFGIEPNESVVFDVVISQRASLRQGTHAHKNRSAVSGGGKKP 64
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
WRQKGTGRAR G+ R PQ+RGG T+ GP PRS+A KL +KVR+L LK S + A+GK+
Sbjct: 65 WRQKGTGRARQGSTRSPQWRGGGTVFGPNPRSYAYKLPQKVRQLALKSVYSTKVADGKL 123
>gi|397680313|ref|YP_006521848.1| 50S ribosomal protein L4 [Mycobacterium massiliense str. GO 06]
gi|420933053|ref|ZP_15396328.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-151-0930]
gi|420937892|ref|ZP_15401161.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-152-0914]
gi|420943315|ref|ZP_15406571.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-153-0915]
gi|420947102|ref|ZP_15410352.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-154-0310]
gi|420953464|ref|ZP_15416706.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0626]
gi|420957637|ref|ZP_15420871.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0107]
gi|420963166|ref|ZP_15426390.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-1231]
gi|420993582|ref|ZP_15456728.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0307]
gi|420999357|ref|ZP_15462492.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0912-R]
gi|421003880|ref|ZP_15467002.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0912-S]
gi|392137812|gb|EIU63549.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-151-0930]
gi|392143407|gb|EIU69132.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-152-0914]
gi|392148412|gb|EIU74130.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-153-0915]
gi|392152377|gb|EIU78084.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0626]
gi|392154132|gb|EIU79838.1| 50S ribosomal protein L4 [Mycobacterium massiliense 1S-154-0310]
gi|392178139|gb|EIV03792.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0912-R]
gi|392179684|gb|EIV05336.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0307]
gi|392192583|gb|EIV18207.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0912-S]
gi|392246079|gb|EIV71556.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-1231]
gi|392247363|gb|EIV72839.1| 50S ribosomal protein L4 [Mycobacterium massiliense 2B-0107]
gi|395458578|gb|AFN64241.1| 50S ribosomal protein L4 [Mycobacterium massiliense str. GO 06]
Length = 213
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 77/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 14 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGP+PR ++ + KK+ L+ ALS RA G++ L
Sbjct: 74 QGSTRAPQFTGGGIVHGPQPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVAGQE 133
Query: 232 PS 233
PS
Sbjct: 134 PS 135
>gi|116513053|ref|YP_811960.1| 50S ribosomal protein L4 [Lactococcus lactis subsp. cremoris SK11]
gi|385839408|ref|YP_005877038.1| 50S ribosomal protein L4 [Lactococcus lactis subsp. cremoris A76]
gi|123125252|sp|Q02W25.1|RL4_LACLS RecName: Full=50S ribosomal protein L4
gi|116108707|gb|ABJ73847.1| LSU ribosomal protein L4P [Lactococcus lactis subsp. cremoris SK11]
gi|358750636|gb|AEU41615.1| LSU ribosomal protein L4p (L1e) [Lactococcus lactis subsp. cremoris
A76]
Length = 208
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 77/119 (64%), Gaps = 3/119 (2%)
Query: 105 NFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ F +D G + L VF + + ++ VV Q A +QGTH+ K S VSG GKKP
Sbjct: 5 SLFKQDGSQAGEVTLNDSVFGIEPNESVVFDVVISQRASLRQGTHAHKNRSAVSGGGKKP 64
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
WRQKGTGRAR G+ R PQ+RGG T+ GP PRS+A KL +KVR+L LK S + A+GK+
Sbjct: 65 WRQKGTGRARQGSTRSPQWRGGGTVFGPNPRSYAYKLPQKVRQLALKSVYSTKVADGKL 123
>gi|365871757|ref|ZP_09411296.1| 50S ribosomal protein L4 [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|414582551|ref|ZP_11439691.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-1215]
gi|420879257|ref|ZP_15342624.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0304]
gi|420884795|ref|ZP_15348155.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0421]
gi|420891410|ref|ZP_15354757.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0422]
gi|420896257|ref|ZP_15359596.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0708]
gi|420900188|ref|ZP_15363519.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0817]
gi|420905028|ref|ZP_15368346.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-1212]
gi|420973381|ref|ZP_15436572.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0921]
gi|421050850|ref|ZP_15513844.1| 50S ribosomal protein L4 [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|363994097|gb|EHM15318.1| 50S ribosomal protein L4 [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|392078670|gb|EIU04497.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0422]
gi|392080558|gb|EIU06384.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0421]
gi|392084166|gb|EIU09991.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0304]
gi|392095569|gb|EIU21364.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0708]
gi|392097549|gb|EIU23343.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0817]
gi|392102932|gb|EIU28718.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-1212]
gi|392117703|gb|EIU43471.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-1215]
gi|392161264|gb|EIU86954.1| 50S ribosomal protein L4 [Mycobacterium abscessus 5S-0921]
gi|392239453|gb|EIV64946.1| 50S ribosomal protein L4 [Mycobacterium massiliense CCUG 48898]
Length = 213
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 77/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 14 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGP+PR ++ + KK+ L+ ALS RA G++ L
Sbjct: 74 QGSTRAPQFTGGGIVHGPQPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVAGQE 133
Query: 232 PS 233
PS
Sbjct: 134 PS 135
>gi|255086631|ref|XP_002509282.1| predicted protein [Micromonas sp. RCC299]
gi|226524560|gb|ACO70540.1| predicted protein [Micromonas sp. RCC299]
Length = 190
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
+ L G FDVP+R DI HRVV WQ +KR+ T T SEVSGT +K QKG GRAR G
Sbjct: 3 VTLPGRHFDVPLRVDIAHRVVVWQRSKRRGNYAKTLTRSEVSGTTRKARAQKGAGRARVG 62
Query: 174 TLRGPQFRGGTTMHGPKP-RSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRP 232
TLR PQ RGG HGP R+ KL ++VRR GL++ALSA+AAEG++ + SL + P
Sbjct: 63 TLRAPQMRGGGVAHGPSGMRNWNTKLQRRVRRAGLQVALSAKAAEGRIVVLDSLHRGVEP 122
>gi|418247031|ref|ZP_12873417.1| 50S ribosomal protein L4 [Mycobacterium abscessus 47J26]
gi|353451524|gb|EHB99917.1| 50S ribosomal protein L4 [Mycobacterium abscessus 47J26]
Length = 218
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 77/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 19 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 78
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGP+PR ++ + KK+ L+ ALS RA G++ L
Sbjct: 79 QGSTRAPQFTGGGIVHGPQPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVAGQE 138
Query: 232 PS 233
PS
Sbjct: 139 PS 140
>gi|312866536|ref|ZP_07726753.1| 50S ribosomal protein L4 [Streptococcus downei F0415]
gi|311097967|gb|EFQ56194.1| 50S ribosomal protein L4 [Streptococcus downei F0415]
Length = 207
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 85/134 (63%), Gaps = 6/134 (4%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 VFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRP---SFSL 236
+RGG + GP PRS+A K +KVRRL LK LSA+ AE K+ +LS F P F+
Sbjct: 83 WRGGGVVFGPTPRSYAYKFPQKVRRLALKSVLSAKVAEEKLVAVDALS-FAAPKTAEFAK 141
Query: 237 SLK--NTDTHVHIV 248
LK + D+ V +V
Sbjct: 142 VLKALSIDSKVLVV 155
>gi|309812335|ref|ZP_07706090.1| 50S ribosomal protein L4 [Dermacoccus sp. Ellin185]
gi|308433640|gb|EFP57517.1| 50S ribosomal protein L4 [Dermacoccus sp. Ellin185]
Length = 214
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 72/104 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+FDV +IH+VV QLA +QGTH TKT EV G G+KP+RQKGTGRAR
Sbjct: 15 GSVELPADIFDVATNVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGRKPYRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS RA
Sbjct: 75 QGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRA 118
>gi|357054995|ref|ZP_09116073.1| 50S ribosomal protein L4 [Clostridium clostridioforme 2_1_49FAA]
gi|355383695|gb|EHG30772.1| 50S ribosomal protein L4 [Clostridium clostridioforme 2_1_49FAA]
Length = 206
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 76/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGTLELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ++GG + P PR + I+LNKK +R L+ AL++R + K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWKGGGIVFAPTPRDYTIRLNKKEKRAALRSALTSRVQDNK 122
>gi|419708878|ref|ZP_14236346.1| 50S ribosomal protein L4 [Mycobacterium abscessus M93]
gi|419715806|ref|ZP_14243206.1| 50S ribosomal protein L4 [Mycobacterium abscessus M94]
gi|382942306|gb|EIC66622.1| 50S ribosomal protein L4 [Mycobacterium abscessus M94]
gi|382942759|gb|EIC67073.1| 50S ribosomal protein L4 [Mycobacterium abscessus M93]
Length = 218
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 77/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 19 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 78
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGP+PR ++ + KK+ L+ ALS RA G++ L
Sbjct: 79 QGSTRAPQFTGGGIVHGPQPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVAGQE 138
Query: 232 PS 233
PS
Sbjct: 139 PS 140
>gi|403713406|ref|ZP_10939523.1| ribosomal protein L4 [Kineosphaera limosa NBRC 100340]
gi|403212492|dbj|GAB94206.1| ribosomal protein L4 [Kineosphaera limosa NBRC 100340]
Length = 215
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 75/110 (68%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
G + L ++FDV +IH+VV QLA +QGTHSTKT E G G+KP+RQKGTGRA
Sbjct: 14 NGTIELPAEIFDVQTNVPLIHQVVVAQLAAARQGTHSTKTRGETRGGGRKPYRQKGTGRA 73
Query: 171 RHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
R G++R PQF GG +HGP+PR ++ + KK++ L+ ALS RA G++
Sbjct: 74 RQGSVRAPQFAGGGVVHGPQPRDYSQRTPKKMKAAALRGALSDRARHGRI 123
>gi|452972597|gb|EME72426.1| 50S ribosomal protein L4 [Bacillus sonorensis L12]
Length = 207
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + + ++ + Q A +QGTH K SEVSG
Sbjct: 1 MPKVALYNQNGSTAGEIELNDSVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS+A KL KKVRRL +K ALS++ +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYAYKLPKKVRRLAIKSALSSKVND 120
Query: 218 GKVSLSVSLSL 228
+ + L+L
Sbjct: 121 NNLIVLEDLTL 131
>gi|209165347|gb|ACI41235.1| ribosomal protein L4, partial [Mycobacterium abscessus subsp.
bolletii]
Length = 199
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 77/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 5 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 64
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGP+PR ++ + KK+ L+ ALS RA G++ L
Sbjct: 65 QGSTRAPQFTGGGIVHGPQPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVAGQE 124
Query: 232 PS 233
PS
Sbjct: 125 PS 126
>gi|169630899|ref|YP_001704548.1| 50S ribosomal protein L4 [Mycobacterium abscessus ATCC 19977]
gi|418421923|ref|ZP_12995096.1| 50S ribosomal protein L4 [Mycobacterium abscessus subsp. bolletii
BD]
gi|420865311|ref|ZP_15328700.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0303]
gi|420870101|ref|ZP_15333483.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0726-RA]
gi|420874547|ref|ZP_15337923.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0726-RB]
gi|420911456|ref|ZP_15374768.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0125-R]
gi|420917911|ref|ZP_15381214.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0125-S]
gi|420923077|ref|ZP_15386373.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0728-S]
gi|420928737|ref|ZP_15392017.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-1108]
gi|420968347|ref|ZP_15431551.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0810-R]
gi|420979078|ref|ZP_15442255.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0212]
gi|420984462|ref|ZP_15447629.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0728-R]
gi|420989629|ref|ZP_15452785.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0206]
gi|421008605|ref|ZP_15471715.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0119-R]
gi|421014514|ref|ZP_15477590.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0122-R]
gi|421019377|ref|ZP_15482434.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0122-S]
gi|421024384|ref|ZP_15487428.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0731]
gi|421030166|ref|ZP_15493197.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0930-R]
gi|421035420|ref|ZP_15498438.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0930-S]
gi|421041871|ref|ZP_15504879.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0116-R]
gi|421044899|ref|ZP_15507899.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0116-S]
gi|169242866|emb|CAM63894.1| 50S ribosomal protein L4 [Mycobacterium abscessus]
gi|363995839|gb|EHM17056.1| 50S ribosomal protein L4 [Mycobacterium abscessus subsp. bolletii
BD]
gi|392064027|gb|EIT89876.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0303]
gi|392066022|gb|EIT91870.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0726-RB]
gi|392069571|gb|EIT95418.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0726-RA]
gi|392110802|gb|EIU36572.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0125-S]
gi|392113450|gb|EIU39219.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0125-R]
gi|392127730|gb|EIU53480.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0728-S]
gi|392129855|gb|EIU55602.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-1108]
gi|392163356|gb|EIU89045.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0212]
gi|392169458|gb|EIU95136.1| 50S ribosomal protein L4 [Mycobacterium abscessus 6G-0728-R]
gi|392183908|gb|EIV09559.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0206]
gi|392196753|gb|EIV22369.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0119-R]
gi|392198791|gb|EIV24402.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0122-R]
gi|392208007|gb|EIV33584.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0122-S]
gi|392211181|gb|EIV36747.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0731]
gi|392222799|gb|EIV48322.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0116-R]
gi|392223386|gb|EIV48908.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0930-R]
gi|392223915|gb|EIV49436.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0930-S]
gi|392234352|gb|EIV59850.1| 50S ribosomal protein L4 [Mycobacterium abscessus 4S-0116-S]
gi|392250854|gb|EIV76328.1| 50S ribosomal protein L4 [Mycobacterium abscessus 3A-0810-R]
Length = 213
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 77/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 14 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGP+PR ++ + KK+ L+ ALS RA G++ L
Sbjct: 74 QGSTRAPQFTGGGIVHGPQPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVAGQE 133
Query: 232 PS 233
PS
Sbjct: 134 PS 135
>gi|227541711|ref|ZP_03971760.1| 50S ribosomal protein L4 [Corynebacterium glucuronolyticum ATCC
51866]
gi|227182526|gb|EEI63498.1| 50S ribosomal protein L4 [Corynebacterium glucuronolyticum ATCC
51866]
Length = 226
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 80/123 (65%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+LV+ V + G + L ++FD + ++H+VV QLA +QGTHSTKT EVSG
Sbjct: 3 NLVLDVHTADGKTDGTVELPAELFDRKVSVALLHQVVNAQLAGARQGTHSTKTRGEVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKP+RQKGTGRAR G++R P F GG HGPKPR ++ + KK++ L ALS RA
Sbjct: 63 GKKPFRQKGTGRARQGSIRAPHFTGGGIAHGPKPRDYSQRTPKKMKAAALLGALSNRART 122
Query: 218 GKV 220
G++
Sbjct: 123 GRI 125
>gi|433609659|ref|YP_007042028.1| 50S ribosomal protein L4 [Saccharothrix espanaensis DSM 44229]
gi|407887512|emb|CCH35155.1| 50S ribosomal protein L4 [Saccharothrix espanaensis DSM 44229]
Length = 228
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 75/111 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VFD ++H+VV QLA +QGTHSTKT EVSG GKKP+RQKGTGRAR
Sbjct: 15 GNVELPPSVFDAQANVALLHQVVVAQLAAARQGTHSTKTRGEVSGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
G+ R PQF GG +HGP+PR ++ + KK++ L+ ALS RA G+V +
Sbjct: 75 QGSTRAPQFAGGGVVHGPQPRDYSQRTPKKMKAAALRGALSDRARAGQVHV 125
>gi|365825952|ref|ZP_09367900.1| 50S ribosomal protein L4 [Actinomyces graevenitzii C83]
gi|365257433|gb|EHM87477.1| 50S ribosomal protein L4 [Actinomyces graevenitzii C83]
Length = 214
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 83/138 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + + E G L ++FDV ++H+VV QLA +QGTH+TKT V G G+K
Sbjct: 7 VDIVDSKGEKTGTAALPAEIFDVETNIALMHQVVTAQLAAARQGTHATKTRGMVRGGGRK 66
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS R G++
Sbjct: 67 PYRQKGTGRARQGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRVRNGRL 126
Query: 221 SLSVSLSLFLRPSFSLSL 238
+ +PS +L
Sbjct: 127 HVITEFVTESKPSTKAAL 144
>gi|313897239|ref|ZP_07830783.1| 50S ribosomal protein L4 [Clostridium sp. HGF2]
gi|373122835|ref|ZP_09536695.1| 50S ribosomal protein L4 [Erysipelotrichaceae bacterium 21_3]
gi|422328954|ref|ZP_16409980.1| 50S ribosomal protein L4 [Erysipelotrichaceae bacterium 6_1_45]
gi|312957960|gb|EFR39584.1| 50S ribosomal protein L4 [Clostridium sp. HGF2]
gi|371658365|gb|EHO23646.1| 50S ribosomal protein L4 [Erysipelotrichaceae bacterium 6_1_45]
gi|371662787|gb|EHO27985.1| 50S ribosomal protein L4 [Erysipelotrichaceae bacterium 21_3]
Length = 209
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 78/138 (56%), Gaps = 8/138 (5%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
+ LA VF + + I V Q A +QGTH TK +EV G G+KPWRQKGTGRAR G
Sbjct: 17 ITLADTVFGIEPNQQCIFDAVIMQRASMRQGTHDTKNRTEVRGGGRKPWRQKGTGRARQG 76
Query: 174 TLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPS 233
++R Q+RGG + GP PR++ KLNKKVRRL LK ALS + E +S+
Sbjct: 77 SIRATQWRGGGIVFGPTPRNYGYKLNKKVRRLALKSALSEKVLENAMSVV--------DK 128
Query: 234 FSLSLKNTDTHVHIVSSI 251
F L T I++ I
Sbjct: 129 FELEAPKTKAFNQIIADI 146
>gi|168334351|ref|ZP_02692538.1| ribosomal protein L4/L1e [Epulopiscium sp. 'N.t. morphotype B']
Length = 207
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 81/128 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L +F V I++ ++H+ V LA ++QGT TKT +EV G G+K
Sbjct: 4 VSVLNMEGKQVGEVSLDDGIFGVEIKEHLVHQAVVSYLANQRQGTQCTKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKG GRAR G++R PQ+ GG + PKPR ++ K+N+K R+ LK AL++R E K+
Sbjct: 64 PWRQKGGGRARQGSIRSPQWTGGGVVFAPKPRDYSFKVNRKERQQALKCALTSRVQEKKI 123
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 124 VVLDELKL 131
>gi|421208093|ref|ZP_15665118.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070005]
gi|421224088|ref|ZP_15680834.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070768]
gi|395576563|gb|EJG37117.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070005]
gi|395591424|gb|EJG51719.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070768]
Length = 207
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 74/111 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL+ VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLSDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK S + AE K
Sbjct: 72 RARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSEKVAENK 122
>gi|342163021|ref|YP_004767660.1| 50S ribosomal protein L4 [Streptococcus pseudopneumoniae IS7493]
gi|341932903|gb|AEL09800.1| 50S ribosomal protein L4 [Streptococcus pseudopneumoniae IS7493]
Length = 207
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 72/108 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLNDAVFGIEPNQSVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAENK 122
>gi|15900146|ref|NP_344750.1| 50S ribosomal protein L4 [Streptococcus pneumoniae TIGR4]
gi|15902233|ref|NP_357783.1| 50S ribosomal protein L4 [Streptococcus pneumoniae R6]
gi|111658800|ref|ZP_01409431.1| hypothetical protein SpneT_02000097 [Streptococcus pneumoniae
TIGR4]
gi|116515366|ref|YP_815713.1| 50S ribosomal protein L4 [Streptococcus pneumoniae D39]
gi|148987946|ref|ZP_01819409.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP6-BS73]
gi|148992786|ref|ZP_01822429.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP9-BS68]
gi|148996631|ref|ZP_01824349.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP11-BS70]
gi|149001685|ref|ZP_01826658.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP14-BS69]
gi|149005959|ref|ZP_01829688.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP18-BS74]
gi|149011078|ref|ZP_01832383.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP19-BS75]
gi|149017898|ref|ZP_01834357.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP23-BS72]
gi|168483846|ref|ZP_02708798.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
CDC1873-00]
gi|168489687|ref|ZP_02713886.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae SP195]
gi|168492163|ref|ZP_02716306.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
CDC0288-04]
gi|168493903|ref|ZP_02718046.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
CDC3059-06]
gi|168576363|ref|ZP_02722246.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae MLV-016]
gi|169833141|ref|YP_001693742.1| 50S ribosomal protein L4 [Streptococcus pneumoniae Hungary19A-6]
gi|182683189|ref|YP_001834936.1| 50S ribosomal protein L4 [Streptococcus pneumoniae CGSP14]
gi|225853816|ref|YP_002735328.1| 50S ribosomal protein L4 [Streptococcus pneumoniae JJA]
gi|225855975|ref|YP_002737486.1| 50S ribosomal protein L4 [Streptococcus pneumoniae P1031]
gi|225858064|ref|YP_002739574.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 70585]
gi|225860252|ref|YP_002741761.1| 50S ribosomal protein L4 [Streptococcus pneumoniae Taiwan19F-14]
gi|237649722|ref|ZP_04523974.1| 50S ribosomal protein L4 [Streptococcus pneumoniae CCRI 1974]
gi|298230367|ref|ZP_06964048.1| 50S ribosomal protein L4 [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255988|ref|ZP_06979574.1| 50S ribosomal protein L4 [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298502024|ref|YP_003723964.1| 50S ribosomal protein L4 [Streptococcus pneumoniae TCH8431/19A]
gi|303255094|ref|ZP_07341170.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS455]
gi|303259262|ref|ZP_07345240.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP-BS293]
gi|303261017|ref|ZP_07346966.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP14-BS292]
gi|303263345|ref|ZP_07349268.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS397]
gi|303265510|ref|ZP_07351410.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS457]
gi|303267932|ref|ZP_07353734.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS458]
gi|307066887|ref|YP_003875853.1| hypothetical protein SPAP_0258 [Streptococcus pneumoniae AP200]
gi|307126430|ref|YP_003878461.1| 50S ribosomal protein L4/L1 family [Streptococcus pneumoniae
670-6B]
gi|387625701|ref|YP_006061873.1| 50S ribosomal protein L4 [Streptococcus pneumoniae INV104]
gi|387758565|ref|YP_006065543.1| 50S ribosomal protein L4 [Streptococcus pneumoniae INV200]
gi|387787421|ref|YP_006252489.1| 50S ribosomal protein L4 [Streptococcus pneumoniae ST556]
gi|410475710|ref|YP_006742469.1| 50S ribosomal protein L4 [Streptococcus pneumoniae gamPNI0373]
gi|417311811|ref|ZP_12098528.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04375]
gi|417675991|ref|ZP_12325404.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17545]
gi|417678181|ref|ZP_12327582.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17570]
gi|417685693|ref|ZP_12334973.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41301]
gi|417695378|ref|ZP_12344558.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47368]
gi|417697684|ref|ZP_12346857.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41317]
gi|418075347|ref|ZP_12712589.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47502]
gi|418077754|ref|ZP_12714978.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 4027-06]
gi|418079913|ref|ZP_12717129.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 6735-05]
gi|418082129|ref|ZP_12719331.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44288]
gi|418084320|ref|ZP_12721508.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47281]
gi|418088016|ref|ZP_12725181.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47033]
gi|418088618|ref|ZP_12725779.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43265]
gi|418090842|ref|ZP_12727987.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44452]
gi|418093078|ref|ZP_12730209.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49138]
gi|418095314|ref|ZP_12732430.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16531]
gi|418097627|ref|ZP_12734729.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 6901-05]
gi|418099808|ref|ZP_12736897.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 7286-06]
gi|418101933|ref|ZP_12739010.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP070]
gi|418108455|ref|ZP_12745490.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41410]
gi|418109185|ref|ZP_12746214.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49447]
gi|418111569|ref|ZP_12748574.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41538]
gi|418113806|ref|ZP_12750799.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 5787-06]
gi|418115973|ref|ZP_12752950.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 6963-05]
gi|418118169|ref|ZP_12755130.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA18523]
gi|418124838|ref|ZP_12761761.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44511]
gi|418129391|ref|ZP_12766275.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA07643]
gi|418131624|ref|ZP_12768500.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11304]
gi|418133938|ref|ZP_12770798.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11426]
gi|418138559|ref|ZP_12775391.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13338]
gi|418140840|ref|ZP_12777655.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13455]
gi|418142997|ref|ZP_12779800.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13494]
gi|418145452|ref|ZP_12782238.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13637]
gi|418147693|ref|ZP_12784460.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13856]
gi|418149802|ref|ZP_12786558.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA14798]
gi|418151980|ref|ZP_12788720.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16121]
gi|418154265|ref|ZP_12790996.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16242]
gi|418156455|ref|ZP_12793174.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16833]
gi|418158854|ref|ZP_12795560.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17227]
gi|418161261|ref|ZP_12797952.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17328]
gi|418163572|ref|ZP_12800248.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17371]
gi|418168312|ref|ZP_12804958.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19077]
gi|418170452|ref|ZP_12807082.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19451]
gi|418175025|ref|ZP_12811623.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41437]
gi|418179596|ref|ZP_12816171.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41688]
gi|418181845|ref|ZP_12818406.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43380]
gi|418186231|ref|ZP_12822762.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47360]
gi|418188457|ref|ZP_12824972.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47373]
gi|418190684|ref|ZP_12827189.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47388]
gi|418192907|ref|ZP_12829403.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47439]
gi|418195026|ref|ZP_12831507.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47688]
gi|418197143|ref|ZP_12833609.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47778]
gi|418199166|ref|ZP_12835615.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47976]
gi|418201528|ref|ZP_12837960.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA52306]
gi|418213420|ref|ZP_12840155.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA54644]
gi|418217960|ref|ZP_12844629.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP127]
gi|418220159|ref|ZP_12846816.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47751]
gi|418222530|ref|ZP_12849176.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 5185-06]
gi|418224665|ref|ZP_12851295.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP112]
gi|418226833|ref|ZP_12853454.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 3063-00]
gi|418228955|ref|ZP_12855566.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP01]
gi|418233439|ref|ZP_12860020.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA08780]
gi|418237800|ref|ZP_12864357.1| 50S ribosomal protein L4 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422541|ref|ZP_13962760.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43264]
gi|419424290|ref|ZP_13964493.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 7533-05]
gi|419426423|ref|ZP_13966607.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 5652-06]
gi|419428498|ref|ZP_13968669.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11856]
gi|419435136|ref|ZP_13975232.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 8190-05]
gi|419437874|ref|ZP_13977944.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13499]
gi|419439455|ref|ZP_13979512.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40410]
gi|419443874|ref|ZP_13983889.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19923]
gi|419445984|ref|ZP_13985990.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 7879-04]
gi|419448143|ref|ZP_13988141.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 4075-00]
gi|419450236|ref|ZP_13990225.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP02]
gi|419452482|ref|ZP_13992457.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP03]
gi|419454636|ref|ZP_13994599.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP04]
gi|419456805|ref|ZP_13996754.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02254]
gi|419459085|ref|ZP_13999021.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02270]
gi|419461345|ref|ZP_14001263.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02714]
gi|419465868|ref|ZP_14005754.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA05248]
gi|419470246|ref|ZP_14010106.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA07914]
gi|419474612|ref|ZP_14014454.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA14688]
gi|419476878|ref|ZP_14016704.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA18068]
gi|419481255|ref|ZP_14021051.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40563]
gi|419483484|ref|ZP_14023260.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43257]
gi|419485719|ref|ZP_14025486.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44128]
gi|419488091|ref|ZP_14027844.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44386]
gi|419494556|ref|ZP_14034276.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47461]
gi|419500988|ref|ZP_14040675.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47628]
gi|419503092|ref|ZP_14042768.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47760]
gi|419505207|ref|ZP_14044868.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49194]
gi|419507314|ref|ZP_14046970.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49542]
gi|419511673|ref|ZP_14051307.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA05578]
gi|419513825|ref|ZP_14053453.1| 50S ribosomal protein L4 [Streptococcus pneumoniae England14-9]
gi|419515942|ref|ZP_14055560.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02506]
gi|419518051|ref|ZP_14057661.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA08825]
gi|419520192|ref|ZP_14059791.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA05245]
gi|419522428|ref|ZP_14062011.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13723]
gi|419524980|ref|ZP_14064546.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA14373]
gi|419527245|ref|ZP_14066792.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17719]
gi|419531503|ref|ZP_14071023.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47794]
gi|421210226|ref|ZP_15667218.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070035]
gi|421219455|ref|ZP_15676317.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070425]
gi|421221772|ref|ZP_15678573.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070531]
gi|421226383|ref|ZP_15683097.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2072047]
gi|421231043|ref|ZP_15687693.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2080076]
gi|421233271|ref|ZP_15689896.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2061617]
gi|421235409|ref|ZP_15692010.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2071004]
gi|421237668|ref|ZP_15694241.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2071247]
gi|421242041|ref|ZP_15698570.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2081074]
gi|421244114|ref|ZP_15700619.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2081685]
gi|421246382|ref|ZP_15702873.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2082170]
gi|421248578|ref|ZP_15705041.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2082239]
gi|421265291|ref|ZP_15716175.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR27]
gi|421267442|ref|ZP_15718317.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR95]
gi|421269650|ref|ZP_15720507.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR48]
gi|421271869|ref|ZP_15722716.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR55]
gi|421274193|ref|ZP_15725025.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA52612]
gi|421278013|ref|ZP_15728825.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17301]
gi|421282461|ref|ZP_15733251.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04216]
gi|421284422|ref|ZP_15735200.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA60190]
gi|421286750|ref|ZP_15737517.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA58771]
gi|421293187|ref|ZP_15743914.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA56113]
gi|421295491|ref|ZP_15746206.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA58581]
gi|421299939|ref|ZP_15750611.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19998]
gi|421302075|ref|ZP_15752740.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17484]
gi|421306416|ref|ZP_15757063.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA60132]
gi|421313196|ref|ZP_15763790.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47562]
gi|444383372|ref|ZP_21181562.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS8106]
gi|444386050|ref|ZP_21184115.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS8203]
gi|444386742|ref|ZP_21184769.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS125219]
gi|444390629|ref|ZP_21188544.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS70012]
gi|444392263|ref|ZP_21190000.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS81218]
gi|444394978|ref|ZP_21192526.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0002]
gi|444396682|ref|ZP_21194169.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0006]
gi|444398748|ref|ZP_21196224.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0007]
gi|444401706|ref|ZP_21198889.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0008]
gi|444404667|ref|ZP_21201613.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0009]
gi|444407051|ref|ZP_21203718.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0010]
gi|444409082|ref|ZP_21205682.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0076]
gi|444413643|ref|ZP_21209958.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0153]
gi|444414074|ref|ZP_21210380.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0199]
gi|444417571|ref|ZP_21213601.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0360]
gi|444420669|ref|ZP_21216439.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0427]
gi|444421764|ref|ZP_21217434.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0446]
gi|46396654|sp|Q97SV4.1|RL4_STRPN RecName: Full=50S ribosomal protein L4
gi|46577255|sp|Q8CWV7.1|RL4_STRR6 RecName: Full=50S ribosomal protein L4
gi|122279401|sp|Q04MN5.1|RL4_STRP2 RecName: Full=50S ribosomal protein L4
gi|226730731|sp|B1I8J9.1|RL4_STRPI RecName: Full=50S ribosomal protein L4
gi|226730739|sp|B2IS41.1|RL4_STRPS RecName: Full=50S ribosomal protein L4
gi|254803755|sp|C1CAL3.1|RL4_STRP7 RecName: Full=50S ribosomal protein L4
gi|254803758|sp|C1CC07.1|RL4_STRZJ RecName: Full=50S ribosomal protein L4
gi|254803759|sp|C1CI98.1|RL4_STRZP RecName: Full=50S ribosomal protein L4
gi|254803760|sp|C1CP89.1|RL4_STRZT RecName: Full=50S ribosomal protein L4
gi|14971678|gb|AAK74390.1| ribosomal protein L4 [Streptococcus pneumoniae TIGR4]
gi|15457733|gb|AAK98993.1| 50S Ribosomal protein L4 [Streptococcus pneumoniae R6]
gi|116075942|gb|ABJ53662.1| ribosomal protein L4 [Streptococcus pneumoniae D39]
gi|147757206|gb|EDK64245.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP11-BS70]
gi|147760143|gb|EDK67132.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP14-BS69]
gi|147762315|gb|EDK69276.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP18-BS74]
gi|147764714|gb|EDK71644.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP19-BS75]
gi|147926410|gb|EDK77483.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP6-BS73]
gi|147928512|gb|EDK79527.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP9-BS68]
gi|147931462|gb|EDK82440.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP23-BS72]
gi|168995643|gb|ACA36255.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
Hungary19A-6]
gi|172042817|gb|EDT50863.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
CDC1873-00]
gi|182628523|gb|ACB89471.1| 50S ribosomal protein L4 [Streptococcus pneumoniae CGSP14]
gi|183571793|gb|EDT92321.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae SP195]
gi|183573611|gb|EDT94139.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
CDC0288-04]
gi|183576018|gb|EDT96546.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
CDC3059-06]
gi|183577871|gb|EDT98399.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae MLV-016]
gi|225720617|gb|ACO16471.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae 70585]
gi|225723287|gb|ACO19140.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae JJA]
gi|225725631|gb|ACO21483.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae P1031]
gi|225728067|gb|ACO23918.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae
Taiwan19F-14]
gi|298237619|gb|ADI68750.1| 50S ribosomal protein L4 [Streptococcus pneumoniae TCH8431/19A]
gi|301793483|emb|CBW35856.1| 50S ribosomal protein L4 [Streptococcus pneumoniae INV104]
gi|301801154|emb|CBW33827.1| 50S ribosomal protein L4 [Streptococcus pneumoniae INV200]
gi|302597924|gb|EFL64994.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS455]
gi|302637854|gb|EFL68340.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP14-BS292]
gi|302639680|gb|EFL70137.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP-BS293]
gi|302642628|gb|EFL72973.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS458]
gi|302644950|gb|EFL75197.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS457]
gi|302647118|gb|EFL77342.1| 50S ribosomal protein L4 [Streptococcus pneumoniae BS397]
gi|306408424|gb|ADM83851.1| hypothetical protein SPAP_0258 [Streptococcus pneumoniae AP200]
gi|306483492|gb|ADM90361.1| ribosomal protein L4/L1 family [Streptococcus pneumoniae 670-6B]
gi|327390629|gb|EGE88969.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04375]
gi|332075875|gb|EGI86342.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17570]
gi|332076656|gb|EGI87118.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17545]
gi|332077511|gb|EGI87972.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41301]
gi|332202125|gb|EGJ16194.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41317]
gi|332203375|gb|EGJ17442.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47368]
gi|353748776|gb|EHD29427.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 4027-06]
gi|353751361|gb|EHD31993.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47502]
gi|353754232|gb|EHD34845.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 6735-05]
gi|353755693|gb|EHD36296.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47033]
gi|353757566|gb|EHD38159.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44288]
gi|353760623|gb|EHD41199.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47281]
gi|353764359|gb|EHD44908.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43265]
gi|353766215|gb|EHD46755.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44452]
gi|353767431|gb|EHD47965.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49138]
gi|353771783|gb|EHD52290.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 6901-05]
gi|353772094|gb|EHD52600.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16531]
gi|353773807|gb|EHD54302.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 7286-06]
gi|353776982|gb|EHD57456.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41410]
gi|353777645|gb|EHD58117.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP070]
gi|353784478|gb|EHD64898.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49447]
gi|353786626|gb|EHD67037.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41538]
gi|353788470|gb|EHD68867.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 5787-06]
gi|353791611|gb|EHD71985.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 6963-05]
gi|353793018|gb|EHD73388.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA18523]
gi|353801694|gb|EHD81996.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44511]
gi|353802683|gb|EHD82975.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA07643]
gi|353808359|gb|EHD88626.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13455]
gi|353808416|gb|EHD88682.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11304]
gi|353810740|gb|EHD90990.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13494]
gi|353813891|gb|EHD94118.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13856]
gi|353816326|gb|EHD96535.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13637]
gi|353817944|gb|EHD98144.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA14798]
gi|353818625|gb|EHD98823.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16121]
gi|353822557|gb|EHE02732.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16242]
gi|353825732|gb|EHE05896.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA16833]
gi|353826509|gb|EHE06667.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17227]
gi|353830851|gb|EHE10980.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17328]
gi|353832998|gb|EHE13110.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17371]
gi|353836231|gb|EHE16319.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19077]
gi|353838746|gb|EHE18823.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19451]
gi|353843585|gb|EHE23629.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41437]
gi|353847018|gb|EHE27045.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41688]
gi|353850082|gb|EHE30086.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43380]
gi|353854053|gb|EHE34033.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47360]
gi|353855599|gb|EHE35568.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47373]
gi|353858283|gb|EHE38243.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47388]
gi|353861054|gb|EHE40993.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47439]
gi|353863145|gb|EHE43074.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47688]
gi|353865680|gb|EHE45587.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47778]
gi|353866754|gb|EHE46650.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47976]
gi|353869004|gb|EHE48887.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA52306]
gi|353870703|gb|EHE50574.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA54644]
gi|353877101|gb|EHE56945.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP127]
gi|353877956|gb|EHE57795.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47751]
gi|353881618|gb|EHE61431.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 5185-06]
gi|353883309|gb|EHE63117.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP112]
gi|353884038|gb|EHE63840.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 3063-00]
gi|353890023|gb|EHE69790.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA08780]
gi|353891393|gb|EHE71149.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP01]
gi|353894933|gb|EHE74673.1| 50S ribosomal protein L4 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353903925|gb|EHE79439.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11426]
gi|353906266|gb|EHE81670.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13338]
gi|379137163|gb|AFC93954.1| 50S ribosomal protein L4 [Streptococcus pneumoniae ST556]
gi|379533491|gb|EHY98704.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02254]
gi|379533957|gb|EHY99169.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02270]
gi|379535381|gb|EHZ00585.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02714]
gi|379537879|gb|EHZ03060.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13499]
gi|379541816|gb|EHZ06981.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA05245]
gi|379547440|gb|EHZ12577.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA05248]
gi|379547879|gb|EHZ13014.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA07914]
gi|379553749|gb|EHZ18832.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11856]
gi|379560049|gb|EHZ25075.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13723]
gi|379560684|gb|EHZ25706.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA14373]
gi|379562119|gb|EHZ27133.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA14688]
gi|379567677|gb|EHZ32660.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA18068]
gi|379568408|gb|EHZ33388.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17719]
gi|379571567|gb|EHZ36524.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19923]
gi|379581940|gb|EHZ46823.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40410]
gi|379582662|gb|EHZ47540.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40563]
gi|379582995|gb|EHZ47872.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43257]
gi|379588628|gb|EHZ53468.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44128]
gi|379589872|gb|EHZ54711.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA43264]
gi|379590206|gb|EHZ55044.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44386]
gi|379596920|gb|EHZ61723.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47461]
gi|379603233|gb|EHZ68002.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47628]
gi|379607121|gb|EHZ71867.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49194]
gi|379609829|gb|EHZ74566.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47794]
gi|379610466|gb|EHZ75197.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47760]
gi|379613449|gb|EHZ78161.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA49542]
gi|379615442|gb|EHZ80148.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 7879-04]
gi|379616805|gb|EHZ81498.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 8190-05]
gi|379619383|gb|EHZ84055.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 5652-06]
gi|379621094|gb|EHZ85743.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 7533-05]
gi|379624955|gb|EHZ89583.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 4075-00]
gi|379625381|gb|EHZ90008.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP02]
gi|379628445|gb|EHZ93049.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP03]
gi|379631077|gb|EHZ95657.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP04]
gi|379636143|gb|EIA00701.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA05578]
gi|379638315|gb|EIA02860.1| 50S ribosomal protein L4 [Streptococcus pneumoniae England14-9]
gi|379639945|gb|EIA04484.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA02506]
gi|379642264|gb|EIA06796.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA08825]
gi|395575925|gb|EJG36485.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070035]
gi|395590863|gb|EJG51163.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070531]
gi|395591255|gb|EJG51551.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070425]
gi|395597240|gb|EJG57447.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2080076]
gi|395597453|gb|EJG57659.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2072047]
gi|395603983|gb|EJG64116.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2061617]
gi|395604328|gb|EJG64460.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2071004]
gi|395605194|gb|EJG65325.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2071247]
gi|395611080|gb|EJG71154.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2081685]
gi|395611904|gb|EJG71958.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2081074]
gi|395615207|gb|EJG75223.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2082239]
gi|395616501|gb|EJG76512.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2082170]
gi|395869313|gb|EJG80428.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR27]
gi|395870302|gb|EJG81415.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR48]
gi|395872531|gb|EJG83629.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR95]
gi|395874921|gb|EJG86002.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA52612]
gi|395877428|gb|EJG88497.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPAR55]
gi|395883132|gb|EJG94175.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17301]
gi|395884431|gb|EJG95469.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04216]
gi|395888342|gb|EJG99353.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA60190]
gi|395891009|gb|EJH02012.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA58771]
gi|395896241|gb|EJH07208.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA56113]
gi|395897560|gb|EJH08519.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA58581]
gi|395901036|gb|EJH11973.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19998]
gi|395902889|gb|EJH13821.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17484]
gi|395910126|gb|EJH21000.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA60132]
gi|395915167|gb|EJH26007.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47562]
gi|406368655|gb|AFS42345.1| 50S ribosomal protein L4 [Streptococcus pneumoniae gamPNI0373]
gi|444248489|gb|ELU54995.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS8203]
gi|444249525|gb|ELU56014.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS8106]
gi|444254493|gb|ELU60926.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS125219]
gi|444257092|gb|ELU63430.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS70012]
gi|444258947|gb|ELU65264.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0002]
gi|444261913|gb|ELU68211.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0006]
gi|444263666|gb|ELU69817.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PCS81218]
gi|444267807|gb|ELU73696.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0008]
gi|444269865|gb|ELU75662.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0007]
gi|444270647|gb|ELU76398.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0010]
gi|444272814|gb|ELU78501.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0153]
gi|444276368|gb|ELU81930.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0009]
gi|444280295|gb|ELU85666.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0076]
gi|444283376|gb|ELU88574.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0199]
gi|444283487|gb|ELU88684.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0360]
gi|444284159|gb|ELU89321.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0427]
gi|444288973|gb|ELU93861.1| 50S ribosomal protein L4 [Streptococcus pneumoniae PNI0446]
Length = 207
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 74/111 (66%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL+ VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLSDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK S + AE K
Sbjct: 72 RARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSEKVAENK 122
>gi|269215704|ref|ZP_06159558.1| ribosomal protein L4/L1 family protein [Slackia exigua ATCC 700122]
gi|269131191|gb|EEZ62266.1| ribosomal protein L4/L1 family protein [Slackia exigua ATCC 700122]
Length = 207
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 80/118 (67%), Gaps = 1/118 (0%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L VF + ++H+VVR Q A +QGTHSTKT +VSG G+KPWRQKGTGRAR GT+
Sbjct: 19 LNAAVFGIEPNVPVMHQVVRSQQAALRQGTHSTKTRGQVSGGGRKPWRQKGTGRARQGTI 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPS 233
R P + GG T+ GP PRS+A ++N+K +L + ALSA+ A+G++++ F PS
Sbjct: 79 RAPHWVGGGTVFGPHPRSYAFRVNRKEVKLAERSALSAKLADGQLTVVEGFD-FEEPS 135
>gi|209165351|gb|ACI41237.1| ribosomal protein L4, partial [Mycobacterium chelonae]
Length = 199
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 77/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 5 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 64
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGP+PR ++ + KK+ L+ ALS RA G++ L
Sbjct: 65 QGSTRAPQFTGGGIVHGPQPRDYSQRTPKKMIAAALRGALSDRARNGRIHAITELVAGQE 124
Query: 232 PS 233
PS
Sbjct: 125 PS 126
>gi|117927516|ref|YP_872067.1| 50S ribosomal protein L4P [Acidothermus cellulolyticus 11B]
gi|117647979|gb|ABK52081.1| LSU ribosomal protein L4P [Acidothermus cellulolyticus 11B]
Length = 220
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 74/107 (69%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L DVFDV + +IH+VV QLA +QGTH T+T EVSG GKKP+RQKGTGRAR G++
Sbjct: 15 LPADVFDVQVNVPLIHQVVVAQLAAARQGTHKTRTRGEVSGGGKKPYRQKGTGRARQGSI 74
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
R PQF GG +HGP PR + + KK++ L+ AL+ RA G++ +
Sbjct: 75 RAPQFTGGGVVHGPMPRHYDQRTPKKMKAAALRGALTDRARAGRIHV 121
>gi|383938939|ref|ZP_09992136.1| 50S ribosomal protein L4 [Streptococcus pseudopneumoniae SK674]
gi|418973596|ref|ZP_13521575.1| 50S ribosomal protein L4 [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383347665|gb|EID25640.1| 50S ribosomal protein L4 [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383714280|gb|EID70289.1| 50S ribosomal protein L4 [Streptococcus pseudopneumoniae SK674]
Length = 207
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 72/108 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAENK 122
>gi|209165345|gb|ACI41234.1| ribosomal protein L4, partial [Mycobacterium abscessus subsp.
bolletii]
gi|209165349|gb|ACI41236.1| ribosomal protein L4, partial [Mycobacterium abscessus]
Length = 199
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 77/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV QLA +QGTHSTKT VSG GKKP+RQKGTGRAR
Sbjct: 5 GSIELPAELFDAPANIALLHQVVTAQLAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRAR 64
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGP+PR ++ + KK+ L+ ALS RA G++ L
Sbjct: 65 QGSTRAPQFTGGGIVHGPQPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVAGQE 124
Query: 232 PS 233
PS
Sbjct: 125 PS 126
>gi|414159413|ref|ZP_11415699.1| 50S ribosomal protein L4 [Staphylococcus simulans ACS-120-V-Sch1]
gi|410884415|gb|EKS32241.1| 50S ribosomal protein L4 [Staphylococcus simulans ACS-120-V-Sch1]
Length = 207
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + KD++ + Q A +QGTHS K S V G G+KPWRQKGTGRAR
Sbjct: 15 GSVELSDAVFAIEPNKDVLFEAINLQRASLRQGTHSVKNRSAVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
GT+R PQ+RGG + GP PRS+A K+ KK+RRL L+ ALS + E + +
Sbjct: 75 QGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENEFKI 125
>gi|227512865|ref|ZP_03942914.1| 50S ribosomal protein L4 [Lactobacillus buchneri ATCC 11577]
gi|227522993|ref|ZP_03953042.1| 50S ribosomal protein L4 [Lactobacillus hilgardii ATCC 8290]
gi|227083865|gb|EEI19177.1| 50S ribosomal protein L4 [Lactobacillus buchneri ATCC 11577]
gi|227089811|gb|EEI25123.1| 50S ribosomal protein L4 [Lactobacillus hilgardii ATCC 8290]
Length = 207
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+F + +++ V Q A R+QGTHS K S V G GKKPWRQKGTGRAR
Sbjct: 15 GTVSLNDDIFGIEPNNNVVFDAVVMQRASRRQGTHSVKNRSAVRGGGKKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G++R PQ+RGG + GP PRS+A L KKV RL LK LS + A+ K+ + SL +F
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRSYAYHLPKKVSRLALKSVLSEKVADEKLVVVDSL-VFET 133
Query: 232 P 232
P
Sbjct: 134 P 134
>gi|225027479|ref|ZP_03716671.1| hypothetical protein EUBHAL_01735 [Eubacterium hallii DSM 3353]
gi|224955214|gb|EEG36423.1| 50S ribosomal protein L4 [Eubacterium hallii DSM 3353]
Length = 198
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 74/108 (68%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ +F VP+ + ++H+ V QLA ++QGT KT SEV G G+KPWRQKGTG AR
Sbjct: 7 GTIELSDSIFAVPVNEHLVHQAVVAQLANKRQGTQKAKTRSEVRGGGRKPWRQKGTGHAR 66
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+ GG + P PR +++K+NKK ++L +K L+++ E K
Sbjct: 67 QGSIRAPQWTGGGVVFAPTPRDYSVKMNKKEKQLAMKSVLTSKVNESK 114
>gi|229821622|ref|YP_002883148.1| 50S ribosomal protein L4 [Beutenbergia cavernae DSM 12333]
gi|229567535|gb|ACQ81386.1| ribosomal protein L4/L1e [Beutenbergia cavernae DSM 12333]
Length = 221
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 77/124 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + + G L DVFDV +IH+VV QLA +QGTH TKT EV G G
Sbjct: 7 LTVDVIDAKGKKSGTADLPADVFDVQTNVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGG 66
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTGRAR G+ R PQF GG +HGP PR ++ + KK++ L+ ALS RA
Sbjct: 67 KKPYRQKGTGRARQGSTRAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRGALSDRARAD 126
Query: 219 KVSL 222
+V +
Sbjct: 127 RVHV 130
>gi|304315941|ref|YP_003851086.1| 50S ribosomal protein L4/L1e [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777443|gb|ADL68002.1| ribosomal protein L4/L1e [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 206
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 77/119 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G M L+ +VF V + ++H VV LA ++QGTHSTK EV G G K
Sbjct: 4 VAVYNINGEQIGEMELSDNVFGVEVNVPVMHEVVLNYLASQRQGTHSTKRRGEVRGGGIK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTGRAR G++R PQ+ G + GPKPR ++ + KKV+RL LK ALS++ + +
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIKGGVVFGPKPRDYSYNIPKKVKRLALKSALSSKVRDNE 122
>gi|359427460|ref|ZP_09218526.1| 50S ribosomal protein L4 [Gordonia amarae NBRC 15530]
gi|358237278|dbj|GAB08108.1| 50S ribosomal protein L4 [Gordonia amarae NBRC 15530]
Length = 226
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 79/122 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV Q A ++QGTH+TKT +VSG G KP+RQKGTGRAR
Sbjct: 25 GTVDLPAELFDAPANISLMHQVVVAQQAAKRQGTHATKTRGQVSGGGAKPYRQKGTGRAR 84
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS RA ++ + L
Sbjct: 85 QGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARNERIHVITELVAGQV 144
Query: 232 PS 233
PS
Sbjct: 145 PS 146
>gi|85703988|ref|ZP_01035091.1| 50S ribosomal protein L4 [Roseovarius sp. 217]
gi|85671308|gb|EAQ26166.1| 50S ribosomal protein L4 [Roseovarius sp. 217]
Length = 205
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 72/111 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+F + R DI+HRVVRWQ K Q GTH KT SE S + KK +RQKGTG AR
Sbjct: 14 GSVDLGEDIFGLEPRADILHRVVRWQRNKAQAGTHKVKTRSETSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
HG P FR G GP PRSHA L KKVR LGLK ALSA+A G++ +
Sbjct: 74 HGDKNAPIFRHGGIYKGPTPRSHAHDLPKKVRALGLKHALSAKAKAGELVI 124
>gi|238061120|ref|ZP_04605829.1| 50S ribosomal protein L4 rplD [Micromonospora sp. ATCC 39149]
gi|57547708|gb|AAW52547.1| RplD [Micromonospora sp. ATCC 39149]
gi|237882931|gb|EEP71759.1| 50S ribosomal protein L4 rplD [Micromonospora sp. ATCC 39149]
Length = 216
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L +FDV ++H+VV QLA +QGTH KT EV+G GKK
Sbjct: 4 VDVLNVEGAKSGSVELPAGIFDVQANIALMHQVVVAQLAAARQGTHKAKTRGEVAGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P++QKGTGRAR G++R PQF GG +HGP PR ++ + KK++ L+ ALS RA G+V
Sbjct: 64 PYKQKGTGRARQGSIRAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRGALSDRARAGQV 123
Query: 221 SLSVSLSLFLRPSFSLSL 238
+ + +PS +L
Sbjct: 124 HVVEAFVSGEKPSTKAAL 141
>gi|227519993|ref|ZP_03950042.1| 50S ribosomal protein L4 [Enterococcus faecalis TX0104]
gi|227555854|ref|ZP_03985901.1| 50S ribosomal protein L4 [Enterococcus faecalis HH22]
gi|229546963|ref|ZP_04435688.1| 50S ribosomal protein L4 [Enterococcus faecalis TX1322]
gi|229550552|ref|ZP_04439277.1| 50S ribosomal protein L4 [Enterococcus faecalis ATCC 29200]
gi|255971710|ref|ZP_05422296.1| 50S ribosomal protein L4 [Enterococcus faecalis T1]
gi|255974710|ref|ZP_05425296.1| 50S ribosomal protein L4 [Enterococcus faecalis T2]
gi|256855164|ref|ZP_05560525.1| ribosomal protein L4 [Enterococcus faecalis T8]
gi|256956861|ref|ZP_05561032.1| 50S ribosomal protein L4 [Enterococcus faecalis DS5]
gi|256960668|ref|ZP_05564839.1| 50S ribosomal protein L4 [Enterococcus faecalis Merz96]
gi|256964133|ref|ZP_05568304.1| 50S ribosomal protein L4 [Enterococcus faecalis HIP11704]
gi|257078531|ref|ZP_05572892.1| 50S ribosomal protein L4 [Enterococcus faecalis JH1]
gi|257081498|ref|ZP_05575859.1| 50S ribosomal protein L4 [Enterococcus faecalis E1Sol]
gi|257084146|ref|ZP_05578507.1| 50S ribosomal protein L4 [Enterococcus faecalis Fly1]
gi|257087973|ref|ZP_05582334.1| 50S ribosomal protein L4 [Enterococcus faecalis D6]
gi|257088650|ref|ZP_05583011.1| 50S ribosomal protein L4 [Enterococcus faecalis CH188]
gi|257417577|ref|ZP_05594571.1| 50S ribosomal protein L4 [Enterococcus faecalis ARO1/DG]
gi|257418698|ref|ZP_05595692.1| 50S ribosomal protein L4 [Enterococcus faecalis T11]
gi|257421501|ref|ZP_05598491.1| 50S ribosomal protein L4 [Enterococcus faecalis X98]
gi|293382757|ref|ZP_06628682.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis R712]
gi|293388060|ref|ZP_06632588.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis S613]
gi|294781052|ref|ZP_06746403.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
PC1.1]
gi|300861819|ref|ZP_07107899.1| 50S ribosomal protein L4 [Enterococcus faecalis TUSoD Ef11]
gi|307269088|ref|ZP_07550449.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX4248]
gi|307274172|ref|ZP_07555380.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0855]
gi|307276397|ref|ZP_07557520.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX2134]
gi|307278607|ref|ZP_07559677.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0860]
gi|307287013|ref|ZP_07567088.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0109]
gi|307291646|ref|ZP_07571521.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0411]
gi|312901121|ref|ZP_07760409.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0470]
gi|312904683|ref|ZP_07763838.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0635]
gi|312908652|ref|ZP_07767594.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis DAPTO
512]
gi|312909200|ref|ZP_07768057.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis DAPTO
516]
gi|312952608|ref|ZP_07771472.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0102]
gi|384512116|ref|YP_005707209.1| 50S ribosomal protein L4/L1 family protein [Enterococcus faecalis
OG1RF]
gi|384517290|ref|YP_005704595.1| 50S ribosomal protein L4 [Enterococcus faecalis 62]
gi|421512626|ref|ZP_15959429.1| LSU ribosomal protein L4p (L1e) [Enterococcus faecalis ATCC 29212]
gi|422686482|ref|ZP_16744679.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX4000]
gi|422687575|ref|ZP_16745751.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0630]
gi|422691717|ref|ZP_16749746.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0031]
gi|422695444|ref|ZP_16753430.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX4244]
gi|422698851|ref|ZP_16756736.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1346]
gi|422700109|ref|ZP_16757965.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1342]
gi|422702664|ref|ZP_16760493.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1302]
gi|422706317|ref|ZP_16764018.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0043]
gi|422709569|ref|ZP_16766950.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0027]
gi|422712990|ref|ZP_16769750.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0309A]
gi|422718192|ref|ZP_16774863.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0309B]
gi|422721610|ref|ZP_16778197.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0017]
gi|422723176|ref|ZP_16779714.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX2137]
gi|422726464|ref|ZP_16782911.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0312]
gi|422728378|ref|ZP_16784796.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0012]
gi|422733231|ref|ZP_16789552.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0645]
gi|422735065|ref|ZP_16791345.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1341]
gi|422738759|ref|ZP_16793946.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX2141]
gi|424671746|ref|ZP_18108737.1| 50S ribosomal protein L4 [Enterococcus faecalis 599]
gi|424678854|ref|ZP_18115692.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV103]
gi|424679767|ref|ZP_18116581.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV116]
gi|424684174|ref|ZP_18120900.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV129]
gi|424688385|ref|ZP_18124991.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV25]
gi|424691501|ref|ZP_18128024.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV31]
gi|424695071|ref|ZP_18131455.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV37]
gi|424696538|ref|ZP_18132883.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV41]
gi|424701829|ref|ZP_18137995.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV62]
gi|424704985|ref|ZP_18141071.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV63]
gi|424706311|ref|ZP_18142318.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV65]
gi|424719001|ref|ZP_18148229.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV68]
gi|424719922|ref|ZP_18149048.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV72]
gi|424722793|ref|ZP_18151818.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV73]
gi|424733404|ref|ZP_18161964.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV81]
gi|424735275|ref|ZP_18163745.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV85]
gi|424754618|ref|ZP_18182527.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV93]
gi|424757508|ref|ZP_18185244.1| 50S ribosomal protein L4 [Enterococcus faecalis R508]
gi|428765831|ref|YP_007151942.1| 50S ribosomal protein L4 [Enterococcus faecalis str. Symbioflor 1]
gi|430362544|ref|ZP_19427088.1| 50S ribosomal protein L4 [Enterococcus faecalis OG1X]
gi|430368710|ref|ZP_19428391.1| 50S ribosomal protein L4 [Enterococcus faecalis M7]
gi|227072541|gb|EEI10504.1| 50S ribosomal protein L4 [Enterococcus faecalis TX0104]
gi|227175021|gb|EEI55993.1| 50S ribosomal protein L4 [Enterococcus faecalis HH22]
gi|229304271|gb|EEN70267.1| 50S ribosomal protein L4 [Enterococcus faecalis ATCC 29200]
gi|229307891|gb|EEN73878.1| 50S ribosomal protein L4 [Enterococcus faecalis TX1322]
gi|255962728|gb|EET95204.1| 50S ribosomal protein L4 [Enterococcus faecalis T1]
gi|255967582|gb|EET98204.1| 50S ribosomal protein L4 [Enterococcus faecalis T2]
gi|256709677|gb|EEU24724.1| ribosomal protein L4 [Enterococcus faecalis T8]
gi|256947357|gb|EEU63989.1| 50S ribosomal protein L4 [Enterococcus faecalis DS5]
gi|256951164|gb|EEU67796.1| 50S ribosomal protein L4 [Enterococcus faecalis Merz96]
gi|256954629|gb|EEU71261.1| 50S ribosomal protein L4 [Enterococcus faecalis HIP11704]
gi|256986561|gb|EEU73863.1| 50S ribosomal protein L4 [Enterococcus faecalis JH1]
gi|256989528|gb|EEU76830.1| 50S ribosomal protein L4 [Enterococcus faecalis E1Sol]
gi|256992176|gb|EEU79478.1| 50S ribosomal protein L4 [Enterococcus faecalis Fly1]
gi|256996003|gb|EEU83305.1| 50S ribosomal protein L4 [Enterococcus faecalis D6]
gi|256997462|gb|EEU83982.1| 50S ribosomal protein L4 [Enterococcus faecalis CH188]
gi|257159405|gb|EEU89365.1| 50S ribosomal protein L4 [Enterococcus faecalis ARO1/DG]
gi|257160526|gb|EEU90486.1| 50S ribosomal protein L4 [Enterococcus faecalis T11]
gi|257163325|gb|EEU93285.1| 50S ribosomal protein L4 [Enterococcus faecalis X98]
gi|291079917|gb|EFE17281.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis R712]
gi|291082511|gb|EFE19474.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis S613]
gi|294451855|gb|EFG20306.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
PC1.1]
gi|295112507|emb|CBL31144.1| Ribosomal protein L4 [Enterococcus sp. 7L76]
gi|300848344|gb|EFK76101.1| 50S ribosomal protein L4 [Enterococcus faecalis TUSoD Ef11]
gi|306497265|gb|EFM66807.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0411]
gi|306501959|gb|EFM71248.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0109]
gi|306504667|gb|EFM73867.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0860]
gi|306506877|gb|EFM76024.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX2134]
gi|306509134|gb|EFM78196.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0855]
gi|306514568|gb|EFM83122.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX4248]
gi|310625439|gb|EFQ08722.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis DAPTO
512]
gi|310629396|gb|EFQ12679.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0102]
gi|310632035|gb|EFQ15318.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0635]
gi|311290442|gb|EFQ68998.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis DAPTO
516]
gi|311291793|gb|EFQ70349.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0470]
gi|315026834|gb|EFT38766.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX2137]
gi|315028874|gb|EFT40806.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX4000]
gi|315031140|gb|EFT43072.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0017]
gi|315036014|gb|EFT47946.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0027]
gi|315145337|gb|EFT89353.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX2141]
gi|315147170|gb|EFT91186.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX4244]
gi|315151072|gb|EFT95088.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0012]
gi|315153608|gb|EFT97624.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0031]
gi|315156212|gb|EFU00229.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0043]
gi|315158643|gb|EFU02660.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0312]
gi|315160729|gb|EFU04746.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0645]
gi|315165900|gb|EFU09917.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1302]
gi|315168101|gb|EFU12118.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1341]
gi|315171459|gb|EFU15476.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1342]
gi|315172693|gb|EFU16710.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1346]
gi|315573515|gb|EFU85706.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0309B]
gi|315579327|gb|EFU91518.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0630]
gi|315582137|gb|EFU94328.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0309A]
gi|323479423|gb|ADX78862.1| 50S ribosomal protein L4 [Enterococcus faecalis 62]
gi|327534005|gb|AEA92839.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
OG1RF]
gi|401674314|gb|EJS80669.1| LSU ribosomal protein L4p (L1e) [Enterococcus faecalis ATCC 29212]
gi|402350557|gb|EJU85459.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV103]
gi|402355722|gb|EJU90484.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV116]
gi|402358014|gb|EJU92702.1| 50S ribosomal protein L4 [Enterococcus faecalis 599]
gi|402360829|gb|EJU95423.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV25]
gi|402362056|gb|EJU96596.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV31]
gi|402362731|gb|EJU97249.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV129]
gi|402368918|gb|EJV03217.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV37]
gi|402370793|gb|EJV04982.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV62]
gi|402377580|gb|EJV11478.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV41]
gi|402380077|gb|EJV13846.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV68]
gi|402380595|gb|EJV14345.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV63]
gi|402388119|gb|EJV21568.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV65]
gi|402392112|gb|EJV25388.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV81]
gi|402394885|gb|EJV28032.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV72]
gi|402400855|gb|EJV33662.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV73]
gi|402403067|gb|EJV35759.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV93]
gi|402404165|gb|EJV36796.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV85]
gi|402406835|gb|EJV39380.1| 50S ribosomal protein L4 [Enterococcus faecalis R508]
gi|427184004|emb|CCO71228.1| 50S ribosomal protein L4 [Enterococcus faecalis str. Symbioflor 1]
gi|429512058|gb|ELA01677.1| 50S ribosomal protein L4 [Enterococcus faecalis OG1X]
gi|429516154|gb|ELA05649.1| 50S ribosomal protein L4 [Enterococcus faecalis M7]
Length = 207
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 89/156 (57%), Gaps = 9/156 (5%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L ++F + + +++ + Q A +QGTH+ K S V G
Sbjct: 1 MPNVALFKQDGTQNGEITLNEEIFGIEPNESVVYDAIIMQRASLRQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS + AE
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSDKVAE 120
Query: 218 GKVSLSVSLSLFLRP---SFSLSLKN--TDTHVHIV 248
+ LS F P F L N DT V +V
Sbjct: 121 NNLVAVEGLS-FDAPKTKEFKQVLANLSIDTKVLVV 155
>gi|392988176|ref|YP_006486769.1| 50S ribosomal protein L4 [Enterococcus hirae ATCC 9790]
gi|392335596|gb|AFM69878.1| 50S ribosomal protein L4 [Enterococcus hirae ATCC 9790]
Length = 207
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L ++F + + +++ + Q A +QGTH+ K S V G
Sbjct: 1 MPNVALFKQDGSQNGEITLNEEIFGIEPNESVVYDAIVMQRASLRQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS + AE
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSEKVAE 120
Query: 218 GKV 220
+
Sbjct: 121 NNL 123
>gi|387877768|ref|YP_006308072.1| 50S ribosomal protein L4 [Mycobacterium sp. MOTT36Y]
gi|443307552|ref|ZP_21037339.1| 50S ribosomal protein L4 [Mycobacterium sp. H4Y]
gi|386791226|gb|AFJ37345.1| 50S ribosomal protein L4 [Mycobacterium sp. MOTT36Y]
gi|442764920|gb|ELR82918.1| 50S ribosomal protein L4 [Mycobacterium sp. H4Y]
Length = 223
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 82/135 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + +G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G
Sbjct: 9 LKIDVKTPAGKVEGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGG 68
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KP+RQKGTGRAR G+ R PQF GG +HGPKPR ++ + KK+ L+ ALS RA G
Sbjct: 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
Query: 219 KVSLSVSLSLFLRPS 233
++ + PS
Sbjct: 129 RIHAVTEIVAGQTPS 143
>gi|331091666|ref|ZP_08340500.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 2_1_46FAA]
gi|330403423|gb|EGG82982.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 2_1_46FAA]
Length = 206
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 74/119 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGNEVGTIDLNDAVFGVEVNEHLLHMAVVNQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PR ++ KLNKK +R LK AL++R E K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYSFKLNKKEKRAALKSALTSRVLENK 122
>gi|197294630|ref|YP_001799171.1| 50S ribosomal protein L4 [Candidatus Phytoplasma australiense]
gi|226730703|sp|B1VAE7.1|RL4_PHYAS RecName: Full=50S ribosomal protein L4
gi|171853957|emb|CAM11920.1| 50S ribosomal protein L4 [Candidatus Phytoplasma australiense]
Length = 207
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 78/113 (69%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L +VFD+ + ++ V+ Q A +QGTH+TKT + VSG GKKPWRQKGTGRARHG++
Sbjct: 19 LKSNVFDIQPHQQALYDVINAQRAAMRQGTHATKTRAFVSGGGKKPWRQKGTGRARHGSI 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
R P +RGG + GP PR++++K+N+KV L LK ALS+ + ++ L +L
Sbjct: 79 RSPLWRGGGVVFGPSPRNYSVKVNQKVSHLALKSALSSHFRQNQLILVDDFNL 131
>gi|443294174|ref|ZP_21033268.1| 50S ribosomal protein L4 [Micromonospora lupini str. Lupac 08]
gi|385882688|emb|CCH21419.1| 50S ribosomal protein L4 [Micromonospora lupini str. Lupac 08]
Length = 216
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 79/123 (64%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L D+FDV ++H+VV QLA +QGTH KT EV+G GKKP++QKGTGRAR G++
Sbjct: 19 LPADIFDVQANVALMHQVVVAQLAAARQGTHKAKTRGEVAGGGKKPYKQKGTGRARQGSI 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS 235
R PQF GG +HGP PR ++ + KK++ L+ ALS RA G+V + + +PS
Sbjct: 79 RAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRGALSDRARAGQVHVVEAFVSGEKPSTK 138
Query: 236 LSL 238
+L
Sbjct: 139 AAL 141
>gi|145596433|ref|YP_001160730.1| 50S ribosomal protein L4 [Salinispora tropica CNB-440]
gi|145305770|gb|ABP56352.1| LSU ribosomal protein L4P [Salinispora tropica CNB-440]
Length = 216
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 80/127 (62%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+FD ++H+VV QLA +QGTH TKT EV+G GKKP++QKGTGRAR
Sbjct: 15 GSVELPADIFDAQANIALMHQVVVAQLAAARQGTHKTKTRGEVAGGGKKPYKQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G++R PQF GG +HGP PR ++ + KK++ L+ ALS RA KV + + +
Sbjct: 75 QGSIRAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRGALSDRARADKVHVVEAFVAGEK 134
Query: 232 PSFSLSL 238
PS +L
Sbjct: 135 PSTKAAL 141
>gi|312115688|ref|YP_004013284.1| 50S ribosomal protein L4 [Rhodomicrobium vannielii ATCC 17100]
gi|311220817|gb|ADP72185.1| ribosomal protein L4/L1e [Rhodomicrobium vannielii ATCC 17100]
Length = 206
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 72/106 (67%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G + L VF + R DI+ R+VR+QL+KRQ GTH K SEV+G KK ++QKGTG+
Sbjct: 12 NAGSVELDDAVFALEPRTDILQRMVRYQLSKRQAGTHKAKARSEVNGPNKKIYKQKGTGQ 71
Query: 170 ARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
ARHG + PQFRGG GP PRSHA L KKVR L LK ALS +A
Sbjct: 72 ARHGNDKPPQFRGGGRTAGPVPRSHAHDLPKKVRALALKHALSVKA 117
>gi|224477219|ref|YP_002634825.1| 50S ribosomal protein L4 [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254803753|sp|B9DM18.1|RL4_STACT RecName: Full=50S ribosomal protein L4
gi|222421826|emb|CAL28640.1| 50S ribosomal protein L4 [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 207
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + KD+I + Q A +QGTHS K S V G G+KPWRQKGTGRAR
Sbjct: 15 GSVELSDSVFAIEPNKDVIFEAINLQRASLRQGTHSVKNRSAVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GT+R PQ+RGG + GP PRS++ K+ KK+RRL L+ ALS + E
Sbjct: 75 QGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSFKVQE 120
>gi|379763907|ref|YP_005350304.1| 50S ribosomal protein L4 [Mycobacterium intracellulare MOTT-64]
gi|378811849|gb|AFC55983.1| 50S ribosomal protein L4 [Mycobacterium intracellulare MOTT-64]
Length = 224
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 82/135 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + +G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G
Sbjct: 10 LKIDVKTPAGKVEGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGG 69
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KP+RQKGTGRAR G+ R PQF GG +HGPKPR ++ + KK+ L+ ALS RA G
Sbjct: 70 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 129
Query: 219 KVSLSVSLSLFLRPS 233
++ + PS
Sbjct: 130 RIHAVTEIVAGQTPS 144
>gi|322391200|ref|ZP_08064672.1| 50S ribosomal protein L4 [Streptococcus peroris ATCC 700780]
gi|321145953|gb|EFX41342.1| 50S ribosomal protein L4 [Streptococcus peroris ATCC 700780]
Length = 207
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 72/108 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLNDAIFGIEPNESVVFDVIVSQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAENK 122
>gi|227550721|ref|ZP_03980770.1| 50S ribosomal protein L4 [Enterococcus faecium TX1330]
gi|257878726|ref|ZP_05658379.1| ribosomal protein L4 [Enterococcus faecium 1,230,933]
gi|257881367|ref|ZP_05661020.1| ribosomal protein L4 [Enterococcus faecium 1,231,502]
gi|257885635|ref|ZP_05665288.1| ribosomal protein L4 [Enterococcus faecium 1,231,501]
gi|257888020|ref|ZP_05667673.1| ribosomal protein L4 [Enterococcus faecium 1,141,733]
gi|257890585|ref|ZP_05670238.1| ribosomal protein L4 [Enterococcus faecium 1,231,410]
gi|257893175|ref|ZP_05672828.1| ribosomal protein L4 [Enterococcus faecium 1,231,408]
gi|257896361|ref|ZP_05676014.1| ribosomal protein L4 [Enterococcus faecium Com12]
gi|257899335|ref|ZP_05678988.1| ribosomal protein L4 [Enterococcus faecium Com15]
gi|261206994|ref|ZP_05921683.1| ribosomal protein L4 [Enterococcus faecium TC 6]
gi|289565371|ref|ZP_06445821.1| 50S ribosomal protein L4/L1 [Enterococcus faecium D344SRF]
gi|293379447|ref|ZP_06625591.1| ribosomal protein L4/L1 family protein [Enterococcus faecium PC4.1]
gi|293553880|ref|ZP_06674486.1| ribosomal protein L4/L1 family [Enterococcus faecium E1039]
gi|293562947|ref|ZP_06677414.1| ribosomal protein L4/L1 family [Enterococcus faecium E1162]
gi|293567930|ref|ZP_06679271.1| ribosomal protein L4/L1 family [Enterococcus faecium E1071]
gi|293570685|ref|ZP_06681735.1| ribosomal protein L4/L1 family [Enterococcus faecium E980]
gi|294615392|ref|ZP_06695265.1| ribosomal protein L4/L1 family [Enterococcus faecium E1636]
gi|294618319|ref|ZP_06697900.1| ribosomal protein L4/L1 family [Enterococcus faecium E1679]
gi|294621079|ref|ZP_06700270.1| ribosomal protein L4/L1 [Enterococcus faecium U0317]
gi|314937609|ref|ZP_07844935.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133a04]
gi|314942892|ref|ZP_07849705.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133C]
gi|314947972|ref|ZP_07851376.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0082]
gi|314950889|ref|ZP_07853958.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133A]
gi|314991463|ref|ZP_07856940.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133B]
gi|314995016|ref|ZP_07860136.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133a01]
gi|383327416|ref|YP_005353300.1| 50S ribosomal protein L4 [Enterococcus faecium Aus0004]
gi|389867241|ref|YP_006374664.1| 50S ribosomal protein L4 [Enterococcus faecium DO]
gi|406580823|ref|ZP_11056011.1| 50S ribosomal protein L4 [Enterococcus sp. GMD4E]
gi|406582819|ref|ZP_11057916.1| 50S ribosomal protein L4 [Enterococcus sp. GMD3E]
gi|406585073|ref|ZP_11060068.1| 50S ribosomal protein L4 [Enterococcus sp. GMD2E]
gi|406590652|ref|ZP_11065011.1| 50S ribosomal protein L4 [Enterococcus sp. GMD1E]
gi|410936018|ref|ZP_11367890.1| 50S ribosomal protein L4 [Enterococcus sp. GMD5E]
gi|415896774|ref|ZP_11550879.1| ribosomal protein L4/L1 family [Enterococcus faecium E4453]
gi|416132153|ref|ZP_11597843.1| ribosomal protein L4/L1 family [Enterococcus faecium E4452]
gi|424763838|ref|ZP_18191303.1| 50S ribosomal protein L4 [Enterococcus faecium TX1337RF]
gi|424791154|ref|ZP_18217635.1| 50S ribosomal protein L4 [Enterococcus faecium V689]
gi|424797492|ref|ZP_18223076.1| 50S ribosomal protein L4 [Enterococcus faecium S447]
gi|424828282|ref|ZP_18253018.1| 50S ribosomal protein L4 [Enterococcus faecium R501]
gi|424854885|ref|ZP_18279228.1| 50S ribosomal protein L4 [Enterococcus faecium R499]
gi|424869461|ref|ZP_18293165.1| 50S ribosomal protein L4 [Enterococcus faecium R497]
gi|424950249|ref|ZP_18365420.1| 50S ribosomal protein L4 [Enterococcus faecium R496]
gi|424954387|ref|ZP_18369289.1| 50S ribosomal protein L4 [Enterococcus faecium R494]
gi|424958476|ref|ZP_18373122.1| 50S ribosomal protein L4 [Enterococcus faecium R446]
gi|424959909|ref|ZP_18374466.1| 50S ribosomal protein L4 [Enterococcus faecium P1986]
gi|424965738|ref|ZP_18379655.1| 50S ribosomal protein L4 [Enterococcus faecium P1190]
gi|424969470|ref|ZP_18383040.1| 50S ribosomal protein L4 [Enterococcus faecium P1140]
gi|424970187|ref|ZP_18383716.1| 50S ribosomal protein L4 [Enterococcus faecium P1139]
gi|424974064|ref|ZP_18387316.1| 50S ribosomal protein L4 [Enterococcus faecium P1137]
gi|424976187|ref|ZP_18389293.1| 50S ribosomal protein L4 [Enterococcus faecium P1123]
gi|424981036|ref|ZP_18393789.1| 50S ribosomal protein L4 [Enterococcus faecium ERV99]
gi|424984549|ref|ZP_18397077.1| 50S ribosomal protein L4 [Enterococcus faecium ERV69]
gi|424987409|ref|ZP_18399784.1| 50S ribosomal protein L4 [Enterococcus faecium ERV38]
gi|424990860|ref|ZP_18403050.1| 50S ribosomal protein L4 [Enterococcus faecium ERV26]
gi|424994518|ref|ZP_18406453.1| 50S ribosomal protein L4 [Enterococcus faecium ERV168]
gi|424997347|ref|ZP_18409110.1| 50S ribosomal protein L4 [Enterococcus faecium ERV165]
gi|425001367|ref|ZP_18412886.1| 50S ribosomal protein L4 [Enterococcus faecium ERV161]
gi|425004033|ref|ZP_18415363.1| 50S ribosomal protein L4 [Enterococcus faecium ERV102]
gi|425006864|ref|ZP_18418019.1| 50S ribosomal protein L4 [Enterococcus faecium ERV1]
gi|425011010|ref|ZP_18421934.1| 50S ribosomal protein L4 [Enterococcus faecium E422]
gi|425014113|ref|ZP_18424808.1| 50S ribosomal protein L4 [Enterococcus faecium E417]
gi|425017911|ref|ZP_18428392.1| 50S ribosomal protein L4 [Enterococcus faecium C621]
gi|425020920|ref|ZP_18431207.1| 50S ribosomal protein L4 [Enterococcus faecium C497]
gi|425030537|ref|ZP_18435710.1| 50S ribosomal protein L4 [Enterococcus faecium C1904]
gi|425032675|ref|ZP_18437701.1| 50S ribosomal protein L4 [Enterococcus faecium 515]
gi|425035538|ref|ZP_18440373.1| 50S ribosomal protein L4 [Enterococcus faecium 514]
gi|425038344|ref|ZP_18442963.1| 50S ribosomal protein L4 [Enterococcus faecium 513]
gi|425041714|ref|ZP_18446097.1| 50S ribosomal protein L4 [Enterococcus faecium 511]
gi|425045422|ref|ZP_18449528.1| 50S ribosomal protein L4 [Enterococcus faecium 510]
gi|425048507|ref|ZP_18452407.1| 50S ribosomal protein L4 [Enterococcus faecium 509]
gi|425051599|ref|ZP_18455256.1| 50S ribosomal protein L4 [Enterococcus faecium 506]
gi|425054907|ref|ZP_18458408.1| 50S ribosomal protein L4 [Enterococcus faecium 505]
gi|425058266|ref|ZP_18461652.1| 50S ribosomal protein L4 [Enterococcus faecium 504]
gi|425060498|ref|ZP_18463792.1| 50S ribosomal protein L4 [Enterococcus faecium 503]
gi|427396938|ref|ZP_18889564.1| 50S ribosomal protein L4 [Enterococcus durans FB129-CNAB-4]
gi|430823272|ref|ZP_19441844.1| 50S ribosomal protein L4 [Enterococcus faecium E0120]
gi|430828772|ref|ZP_19446887.1| 50S ribosomal protein L4 [Enterococcus faecium E0269]
gi|430831821|ref|ZP_19449869.1| 50S ribosomal protein L4 [Enterococcus faecium E0333]
gi|430834875|ref|ZP_19452877.1| 50S ribosomal protein L4 [Enterococcus faecium E0679]
gi|430836367|ref|ZP_19454348.1| 50S ribosomal protein L4 [Enterococcus faecium E0680]
gi|430839295|ref|ZP_19457236.1| 50S ribosomal protein L4 [Enterococcus faecium E0688]
gi|430842491|ref|ZP_19460406.1| 50S ribosomal protein L4 [Enterococcus faecium E1007]
gi|430843054|ref|ZP_19460956.1| 50S ribosomal protein L4 [Enterococcus faecium E1050]
gi|430848220|ref|ZP_19466046.1| 50S ribosomal protein L4 [Enterococcus faecium E1133]
gi|430850698|ref|ZP_19468455.1| 50S ribosomal protein L4 [Enterococcus faecium E1185]
gi|430853289|ref|ZP_19471019.1| 50S ribosomal protein L4 [Enterococcus faecium E1258]
gi|430855749|ref|ZP_19473455.1| 50S ribosomal protein L4 [Enterococcus faecium E1392]
gi|430859010|ref|ZP_19476628.1| 50S ribosomal protein L4 [Enterococcus faecium E1552]
gi|430861232|ref|ZP_19478821.1| 50S ribosomal protein L4 [Enterococcus faecium E1573]
gi|430866305|ref|ZP_19481582.1| 50S ribosomal protein L4 [Enterococcus faecium E1574]
gi|430952275|ref|ZP_19486318.1| 50S ribosomal protein L4 [Enterococcus faecium E1576]
gi|430999158|ref|ZP_19488126.1| 50S ribosomal protein L4 [Enterococcus faecium E1578]
gi|431036415|ref|ZP_19492185.1| 50S ribosomal protein L4 [Enterococcus faecium E1590]
gi|431081707|ref|ZP_19495797.1| 50S ribosomal protein L4 [Enterococcus faecium E1604]
gi|431118100|ref|ZP_19498054.1| 50S ribosomal protein L4 [Enterococcus faecium E1613]
gi|431210723|ref|ZP_19501009.1| 50S ribosomal protein L4 [Enterococcus faecium E1620]
gi|431235004|ref|ZP_19503027.1| 50S ribosomal protein L4 [Enterococcus faecium E1622]
gi|431255612|ref|ZP_19504735.1| 50S ribosomal protein L4 [Enterococcus faecium E1623]
gi|431303542|ref|ZP_19508389.1| 50S ribosomal protein L4 [Enterococcus faecium E1626]
gi|431380514|ref|ZP_19510895.1| 50S ribosomal protein L4 [Enterococcus faecium E1627]
gi|431438045|ref|ZP_19513208.1| 50S ribosomal protein L4 [Enterococcus faecium E1630]
gi|431506897|ref|ZP_19515723.1| 50S ribosomal protein L4 [Enterococcus faecium E1634]
gi|431545075|ref|ZP_19518716.1| 50S ribosomal protein L4 [Enterococcus faecium E1731]
gi|431592335|ref|ZP_19521571.1| 50S ribosomal protein L4 [Enterococcus faecium E1861]
gi|431695862|ref|ZP_19524756.1| 50S ribosomal protein L4 [Enterococcus faecium E1904]
gi|431739069|ref|ZP_19528009.1| 50S ribosomal protein L4 [Enterococcus faecium E1972]
gi|431740650|ref|ZP_19529561.1| 50S ribosomal protein L4 [Enterococcus faecium E2039]
gi|431743966|ref|ZP_19532839.1| 50S ribosomal protein L4 [Enterococcus faecium E2071]
gi|431747237|ref|ZP_19536036.1| 50S ribosomal protein L4 [Enterococcus faecium E2134]
gi|431749425|ref|ZP_19538166.1| 50S ribosomal protein L4 [Enterococcus faecium E2297]
gi|431753116|ref|ZP_19541793.1| 50S ribosomal protein L4 [Enterococcus faecium E2620]
gi|431755938|ref|ZP_19544580.1| 50S ribosomal protein L4 [Enterococcus faecium E2883]
gi|431757942|ref|ZP_19546571.1| 50S ribosomal protein L4 [Enterococcus faecium E3083]
gi|431760074|ref|ZP_19548678.1| 50S ribosomal protein L4 [Enterococcus faecium E3346]
gi|431763208|ref|ZP_19551761.1| 50S ribosomal protein L4 [Enterococcus faecium E3548]
gi|431764905|ref|ZP_19553431.1| 50S ribosomal protein L4 [Enterococcus faecium E4215]
gi|431768073|ref|ZP_19556514.1| 50S ribosomal protein L4 [Enterococcus faecium E1321]
gi|431769422|ref|ZP_19557832.1| 50S ribosomal protein L4 [Enterococcus faecium E1644]
gi|431774573|ref|ZP_19562880.1| 50S ribosomal protein L4 [Enterococcus faecium E2369]
gi|431776377|ref|ZP_19564639.1| 50S ribosomal protein L4 [Enterococcus faecium E2560]
gi|431779701|ref|ZP_19567893.1| 50S ribosomal protein L4 [Enterococcus faecium E4389]
gi|431782496|ref|ZP_19570629.1| 50S ribosomal protein L4 [Enterococcus faecium E6012]
gi|431784317|ref|ZP_19572359.1| 50S ribosomal protein L4 [Enterococcus faecium E6045]
gi|447911578|ref|YP_007392990.1| LSU ribosomal protein L4p (L1e) [Enterococcus faecium NRRL B-2354]
gi|227180182|gb|EEI61154.1| 50S ribosomal protein L4 [Enterococcus faecium TX1330]
gi|257812954|gb|EEV41712.1| ribosomal protein L4 [Enterococcus faecium 1,230,933]
gi|257817025|gb|EEV44353.1| ribosomal protein L4 [Enterococcus faecium 1,231,502]
gi|257821491|gb|EEV48621.1| ribosomal protein L4 [Enterococcus faecium 1,231,501]
gi|257824074|gb|EEV51006.1| ribosomal protein L4 [Enterococcus faecium 1,141,733]
gi|257826945|gb|EEV53571.1| ribosomal protein L4 [Enterococcus faecium 1,231,410]
gi|257829554|gb|EEV56161.1| ribosomal protein L4 [Enterococcus faecium 1,231,408]
gi|257832926|gb|EEV59347.1| ribosomal protein L4 [Enterococcus faecium Com12]
gi|257837247|gb|EEV62321.1| ribosomal protein L4 [Enterococcus faecium Com15]
gi|260078622|gb|EEW66324.1| ribosomal protein L4 [Enterococcus faecium TC 6]
gi|289162861|gb|EFD10711.1| 50S ribosomal protein L4/L1 [Enterococcus faecium D344SRF]
gi|291291686|gb|ADD91677.1| 50S ribosomal protein L4 [Enterococcus faecium]
gi|291589515|gb|EFF21322.1| ribosomal protein L4/L1 family [Enterococcus faecium E1071]
gi|291591766|gb|EFF23402.1| ribosomal protein L4/L1 family [Enterococcus faecium E1636]
gi|291595413|gb|EFF26725.1| ribosomal protein L4/L1 family [Enterococcus faecium E1679]
gi|291599315|gb|EFF30341.1| ribosomal protein L4/L1 [Enterococcus faecium U0317]
gi|291601932|gb|EFF32178.1| ribosomal protein L4/L1 family [Enterococcus faecium E1039]
gi|291605073|gb|EFF34540.1| ribosomal protein L4/L1 family [Enterococcus faecium E1162]
gi|291609157|gb|EFF38429.1| ribosomal protein L4/L1 family [Enterococcus faecium E980]
gi|292641970|gb|EFF60136.1| ribosomal protein L4/L1 family protein [Enterococcus faecium PC4.1]
gi|313590742|gb|EFR69587.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133a01]
gi|313593943|gb|EFR72788.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133B]
gi|313596898|gb|EFR75743.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133A]
gi|313598364|gb|EFR77209.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133C]
gi|313642986|gb|EFS07566.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133a04]
gi|313645570|gb|EFS10150.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0082]
gi|364090882|gb|EHM33410.1| ribosomal protein L4/L1 family [Enterococcus faecium E4453]
gi|364093419|gb|EHM35693.1| ribosomal protein L4/L1 family [Enterococcus faecium E4452]
gi|378937110|gb|AFC62182.1| 50S ribosomal protein L4 [Enterococcus faecium Aus0004]
gi|388532490|gb|AFK57682.1| ribosomal protein L4 [Enterococcus faecium DO]
gi|402422014|gb|EJV54257.1| 50S ribosomal protein L4 [Enterococcus faecium TX1337RF]
gi|402919912|gb|EJX40471.1| 50S ribosomal protein L4 [Enterococcus faecium V689]
gi|402921048|gb|EJX41518.1| 50S ribosomal protein L4 [Enterococcus faecium S447]
gi|402922816|gb|EJX43163.1| 50S ribosomal protein L4 [Enterococcus faecium R501]
gi|402932214|gb|EJX51746.1| 50S ribosomal protein L4 [Enterococcus faecium R499]
gi|402933538|gb|EJX52964.1| 50S ribosomal protein L4 [Enterococcus faecium R496]
gi|402935564|gb|EJX54807.1| 50S ribosomal protein L4 [Enterococcus faecium R497]
gi|402937021|gb|EJX56165.1| 50S ribosomal protein L4 [Enterococcus faecium R494]
gi|402940102|gb|EJX58959.1| 50S ribosomal protein L4 [Enterococcus faecium R446]
gi|402942959|gb|EJX61500.1| 50S ribosomal protein L4 [Enterococcus faecium P1190]
gi|402948440|gb|EJX66577.1| 50S ribosomal protein L4 [Enterococcus faecium P1140]
gi|402949393|gb|EJX67459.1| 50S ribosomal protein L4 [Enterococcus faecium P1986]
gi|402957411|gb|EJX74802.1| 50S ribosomal protein L4 [Enterococcus faecium P1137]
gi|402962390|gb|EJX79332.1| 50S ribosomal protein L4 [Enterococcus faecium P1139]
gi|402964650|gb|EJX81418.1| 50S ribosomal protein L4 [Enterococcus faecium ERV99]
gi|402968496|gb|EJX84975.1| 50S ribosomal protein L4 [Enterococcus faecium ERV69]
gi|402970313|gb|EJX86668.1| 50S ribosomal protein L4 [Enterococcus faecium P1123]
gi|402974401|gb|EJX90453.1| 50S ribosomal protein L4 [Enterococcus faecium ERV38]
gi|402978442|gb|EJX94181.1| 50S ribosomal protein L4 [Enterococcus faecium ERV26]
gi|402979945|gb|EJX95584.1| 50S ribosomal protein L4 [Enterococcus faecium ERV168]
gi|402986461|gb|EJY01584.1| 50S ribosomal protein L4 [Enterococcus faecium ERV165]
gi|402986924|gb|EJY02023.1| 50S ribosomal protein L4 [Enterococcus faecium ERV161]
gi|402990686|gb|EJY05551.1| 50S ribosomal protein L4 [Enterococcus faecium ERV102]
gi|402996196|gb|EJY10596.1| 50S ribosomal protein L4 [Enterococcus faecium ERV1]
gi|402998217|gb|EJY12482.1| 50S ribosomal protein L4 [Enterococcus faecium E422]
gi|402999463|gb|EJY13650.1| 50S ribosomal protein L4 [Enterococcus faecium E417]
gi|403002770|gb|EJY16716.1| 50S ribosomal protein L4 [Enterococcus faecium C1904]
gi|403003429|gb|EJY17329.1| 50S ribosomal protein L4 [Enterococcus faecium C621]
gi|403008098|gb|EJY21627.1| 50S ribosomal protein L4 [Enterococcus faecium C497]
gi|403012432|gb|EJY25659.1| 50S ribosomal protein L4 [Enterococcus faecium 515]
gi|403017792|gb|EJY30516.1| 50S ribosomal protein L4 [Enterococcus faecium 514]
gi|403019710|gb|EJY32293.1| 50S ribosomal protein L4 [Enterococcus faecium 513]
gi|403025495|gb|EJY37573.1| 50S ribosomal protein L4 [Enterococcus faecium 511]
gi|403027115|gb|EJY39027.1| 50S ribosomal protein L4 [Enterococcus faecium 510]
gi|403030438|gb|EJY42121.1| 50S ribosomal protein L4 [Enterococcus faecium 509]
gi|403035041|gb|EJY46449.1| 50S ribosomal protein L4 [Enterococcus faecium 505]
gi|403037219|gb|EJY48519.1| 50S ribosomal protein L4 [Enterococcus faecium 506]
gi|403038796|gb|EJY49993.1| 50S ribosomal protein L4 [Enterococcus faecium 504]
gi|403042542|gb|EJY53489.1| 50S ribosomal protein L4 [Enterococcus faecium 503]
gi|404453454|gb|EKA00510.1| 50S ribosomal protein L4 [Enterococcus sp. GMD4E]
gi|404457556|gb|EKA04093.1| 50S ribosomal protein L4 [Enterococcus sp. GMD3E]
gi|404463055|gb|EKA08753.1| 50S ribosomal protein L4 [Enterococcus sp. GMD2E]
gi|404469026|gb|EKA13865.1| 50S ribosomal protein L4 [Enterococcus sp. GMD1E]
gi|410735609|gb|EKQ77518.1| 50S ribosomal protein L4 [Enterococcus sp. GMD5E]
gi|425722685|gb|EKU85579.1| 50S ribosomal protein L4 [Enterococcus durans FB129-CNAB-4]
gi|430442370|gb|ELA52415.1| 50S ribosomal protein L4 [Enterococcus faecium E0120]
gi|430480462|gb|ELA57636.1| 50S ribosomal protein L4 [Enterococcus faecium E0333]
gi|430482756|gb|ELA59857.1| 50S ribosomal protein L4 [Enterococcus faecium E0269]
gi|430484944|gb|ELA61891.1| 50S ribosomal protein L4 [Enterococcus faecium E0679]
gi|430488494|gb|ELA65165.1| 50S ribosomal protein L4 [Enterococcus faecium E0680]
gi|430490753|gb|ELA67249.1| 50S ribosomal protein L4 [Enterococcus faecium E0688]
gi|430493572|gb|ELA69875.1| 50S ribosomal protein L4 [Enterococcus faecium E1007]
gi|430498108|gb|ELA74116.1| 50S ribosomal protein L4 [Enterococcus faecium E1050]
gi|430535057|gb|ELA75480.1| 50S ribosomal protein L4 [Enterococcus faecium E1185]
gi|430535563|gb|ELA75963.1| 50S ribosomal protein L4 [Enterococcus faecium E1133]
gi|430541111|gb|ELA81288.1| 50S ribosomal protein L4 [Enterococcus faecium E1258]
gi|430544529|gb|ELA84558.1| 50S ribosomal protein L4 [Enterococcus faecium E1552]
gi|430546291|gb|ELA86253.1| 50S ribosomal protein L4 [Enterococcus faecium E1392]
gi|430550265|gb|ELA90062.1| 50S ribosomal protein L4 [Enterococcus faecium E1573]
gi|430551533|gb|ELA91284.1| 50S ribosomal protein L4 [Enterococcus faecium E1574]
gi|430557410|gb|ELA96869.1| 50S ribosomal protein L4 [Enterococcus faecium E1576]
gi|430562955|gb|ELB02186.1| 50S ribosomal protein L4 [Enterococcus faecium E1590]
gi|430563265|gb|ELB02494.1| 50S ribosomal protein L4 [Enterococcus faecium E1578]
gi|430565639|gb|ELB04785.1| 50S ribosomal protein L4 [Enterococcus faecium E1604]
gi|430568057|gb|ELB07114.1| 50S ribosomal protein L4 [Enterococcus faecium E1613]
gi|430570582|gb|ELB09531.1| 50S ribosomal protein L4 [Enterococcus faecium E1620]
gi|430572864|gb|ELB11700.1| 50S ribosomal protein L4 [Enterococcus faecium E1622]
gi|430577810|gb|ELB16390.1| 50S ribosomal protein L4 [Enterococcus faecium E1623]
gi|430580183|gb|ELB18663.1| 50S ribosomal protein L4 [Enterococcus faecium E1626]
gi|430582382|gb|ELB20809.1| 50S ribosomal protein L4 [Enterococcus faecium E1627]
gi|430586880|gb|ELB25122.1| 50S ribosomal protein L4 [Enterococcus faecium E1630]
gi|430587284|gb|ELB25517.1| 50S ribosomal protein L4 [Enterococcus faecium E1634]
gi|430591960|gb|ELB29987.1| 50S ribosomal protein L4 [Enterococcus faecium E1861]
gi|430592123|gb|ELB30145.1| 50S ribosomal protein L4 [Enterococcus faecium E1731]
gi|430596612|gb|ELB34436.1| 50S ribosomal protein L4 [Enterococcus faecium E1972]
gi|430597815|gb|ELB35597.1| 50S ribosomal protein L4 [Enterococcus faecium E1904]
gi|430602733|gb|ELB40283.1| 50S ribosomal protein L4 [Enterococcus faecium E2039]
gi|430606029|gb|ELB43401.1| 50S ribosomal protein L4 [Enterococcus faecium E2071]
gi|430606766|gb|ELB44104.1| 50S ribosomal protein L4 [Enterococcus faecium E2134]
gi|430611554|gb|ELB48635.1| 50S ribosomal protein L4 [Enterococcus faecium E2297]
gi|430612621|gb|ELB49656.1| 50S ribosomal protein L4 [Enterococcus faecium E2620]
gi|430616053|gb|ELB52978.1| 50S ribosomal protein L4 [Enterococcus faecium E2883]
gi|430618447|gb|ELB55294.1| 50S ribosomal protein L4 [Enterococcus faecium E3083]
gi|430622902|gb|ELB59612.1| 50S ribosomal protein L4 [Enterococcus faecium E3548]
gi|430625343|gb|ELB61983.1| 50S ribosomal protein L4 [Enterococcus faecium E3346]
gi|430629676|gb|ELB66065.1| 50S ribosomal protein L4 [Enterococcus faecium E4215]
gi|430629802|gb|ELB66190.1| 50S ribosomal protein L4 [Enterococcus faecium E1321]
gi|430633978|gb|ELB70123.1| 50S ribosomal protein L4 [Enterococcus faecium E2369]
gi|430636997|gb|ELB73041.1| 50S ribosomal protein L4 [Enterococcus faecium E1644]
gi|430640928|gb|ELB76749.1| 50S ribosomal protein L4 [Enterococcus faecium E2560]
gi|430641463|gb|ELB77265.1| 50S ribosomal protein L4 [Enterococcus faecium E4389]
gi|430647133|gb|ELB82581.1| 50S ribosomal protein L4 [Enterococcus faecium E6012]
gi|430649891|gb|ELB85258.1| 50S ribosomal protein L4 [Enterococcus faecium E6045]
gi|445187287|gb|AGE28929.1| LSU ribosomal protein L4p (L1e) [Enterococcus faecium NRRL B-2354]
Length = 207
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L ++F + + +++ + Q A +QGTH+ K S V G
Sbjct: 1 MPNVALFKQDGSQNGEITLNEEIFGIEPNESVVYDAIVMQRASLRQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS + AE
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSEKVAE 120
Query: 218 GKV 220
+
Sbjct: 121 NNL 123
>gi|159042833|ref|YP_001531627.1| 50S ribosomal protein L4 [Dinoroseobacter shibae DFL 12]
gi|189029501|sp|A8LM49.1|RL4_DINSH RecName: Full=50S ribosomal protein L4
gi|157910593|gb|ABV92026.1| 50S ribosomal protein L4/L1e [Dinoroseobacter shibae DFL 12]
Length = 205
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 84/143 (58%), Gaps = 1/143 (0%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V E G + L +F + R DI+HRVVRWQ K Q GTH KT SEVS +
Sbjct: 1 MKLDVIKLDGEAAGSVELDEALFGLEPRADILHRVVRWQRNKAQAGTHKVKTRSEVSYST 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK +RQKGTG ARHG P FR G GP PRSHA L KK R+LGLK ALSA+A G
Sbjct: 61 KKIYRQKGTGGARHGARSAPIFRKGGIYKGPTPRSHAHDLPKKFRKLGLKHALSAKAKAG 120
Query: 219 K-VSLSVSLSLFLRPSFSLSLKN 240
+ V + ++ S + + +KN
Sbjct: 121 ELVVIDMATSEGKTATLAKQIKN 143
>gi|254822786|ref|ZP_05227787.1| 50S ribosomal protein L4 [Mycobacterium intracellulare ATCC 13950]
gi|379756372|ref|YP_005345044.1| 50S ribosomal protein L4 [Mycobacterium intracellulare MOTT-02]
gi|406032656|ref|YP_006731548.1| 50S ribosomal protein L4 [Mycobacterium indicus pranii MTCC 9506]
gi|378806588|gb|AFC50723.1| 50S ribosomal protein L4 [Mycobacterium intracellulare MOTT-02]
gi|405131203|gb|AFS16458.1| 50S ribosomal protein L4 [Mycobacterium indicus pranii MTCC 9506]
Length = 223
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 82/135 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + +G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G
Sbjct: 9 LKIDVKTPAGKVEGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGG 68
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KP+RQKGTGRAR G+ R PQF GG +HGPKPR ++ + KK+ L+ ALS RA G
Sbjct: 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
Query: 219 KVSLSVSLSLFLRPS 233
++ + PS
Sbjct: 129 RIHAVTEIVAGQTPS 143
>gi|94266252|ref|ZP_01289959.1| Ribosomal protein L4/L1e [delta proteobacterium MLMS-1]
gi|93453178|gb|EAT03642.1| Ribosomal protein L4/L1e [delta proteobacterium MLMS-1]
Length = 207
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+ VT +N E G + L + + + ++H +VR Q A R+ GT +TKT EVSG+
Sbjct: 1 MAVTEIYNTSKEKVGEIDLNDQLVKLEVNPHLLHDIVRMQRANRRAGTAATKTRKEVSGS 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
KKPWRQKGTGRAR GT + P +RGG T+ GP+PR ++ ++ +K RRLGL++A+SAR E
Sbjct: 61 SKKPWRQKGTGRARAGTRKSPVWRGGGTVFGPQPRDYSFRMPRKARRLGLRMAISARYQE 120
>gi|260558288|ref|ZP_05830484.1| ribosomal protein L4 [Enterococcus faecium C68]
gi|430820843|ref|ZP_19439464.1| 50S ribosomal protein L4 [Enterococcus faecium E0045]
gi|430826442|ref|ZP_19444625.1| 50S ribosomal protein L4 [Enterococcus faecium E0164]
gi|430890749|ref|ZP_19484439.1| 50S ribosomal protein L4 [Enterococcus faecium E1575]
gi|260075462|gb|EEW63768.1| ribosomal protein L4 [Enterococcus faecium C68]
gi|430439103|gb|ELA49481.1| 50S ribosomal protein L4 [Enterococcus faecium E0045]
gi|430445069|gb|ELA54856.1| 50S ribosomal protein L4 [Enterococcus faecium E0164]
gi|430555797|gb|ELA95326.1| 50S ribosomal protein L4 [Enterococcus faecium E1575]
Length = 207
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L ++F + + +++ + Q A +QGTH+ K S V G
Sbjct: 1 MPNVALFKQDGSQNGEITLNEEIFGIEPNESVVYDAIVMQRASLRQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS + AE
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSEKVAE 120
Query: 218 GKV 220
+
Sbjct: 121 NNL 123
>gi|302390959|ref|YP_003826779.1| 50S ribosomal protein L4P [Acetohalobium arabaticum DSM 5501]
gi|302203036|gb|ADL11714.1| LSU ribosomal protein L4P [Acetohalobium arabaticum DSM 5501]
Length = 209
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 78/111 (70%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +FDV I + ++H V QLA ++ GT STKT +EV G G+KPWRQKGTGRAR
Sbjct: 15 GEVELNQSIFDVEINEHVVHEAVTAQLAAKRAGTASTKTRAEVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
HG++R P + GG T GP+PR ++ + KKV+RL +K AL+A+ + ++++
Sbjct: 75 HGSIRSPIWVGGGTTFGPQPRDYSKDIPKKVKRLAVKSALTAKVQDEELTV 125
>gi|291518044|emb|CBK73265.1| LSU ribosomal protein L4P [Butyrivibrio fibrisolvens 16/4]
Length = 206
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 73/119 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L +F V I + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVFNMEGKEVGSMDLNDSIFAVEINEHLVHMAVVQQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PR ++ KLNKK +R LK AL++ E K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYSFKLNKKEKRAALKSALTSVVNENK 122
>gi|376259803|ref|YP_005146523.1| 50S ribosomal protein L4 [Clostridium sp. BNL1100]
gi|373943797|gb|AEY64718.1| 50S ribosomal protein L4, bacterial/organelle [Clostridium sp.
BNL1100]
Length = 207
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +N E G + L +VF + +++H VV QLA ++QGT STKT SEV G
Sbjct: 1 MPKVDLYNMKGEVVGDIQLCDNVFGAEVNNEVLHAVVVNQLANKRQGTQSTKTKSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRAR G++R Q+ G + GPKPRS+ + KKV+R+ +K AL+++ +
Sbjct: 61 GKKPWRQKGTGRARQGSIRSAQWIKGGIVLGPKPRSYRYTMPKKVKRIAMKSALTSKVSG 120
Query: 218 GKVSLSVSLSL 228
++ + +L+L
Sbjct: 121 NEIFVLDALTL 131
>gi|223983922|ref|ZP_03634082.1| hypothetical protein HOLDEFILI_01363 [Holdemania filiformis DSM
12042]
gi|223964114|gb|EEF68466.1| hypothetical protein HOLDEFILI_01363 [Holdemania filiformis DSM
12042]
Length = 209
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFN-EDKGF--MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N +N E K + LA VF + + ++ + Q A +QGTH TK+ EVSG
Sbjct: 1 MPKLNVYNLEAKEIREIELAEAVFGIEPNQQVMFDALIMQRANMRQGTHDTKSRHEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRAR G++R PQ+RGG GP PRS+A +LN+KVRRL L+ LS + E
Sbjct: 61 GKKPWRQKGTGRARQGSIRAPQWRGGGIAFGPTPRSYAYRLNRKVRRLALRSLLSEKVIE 120
Query: 218 GKVSLSVSLSL 228
+ + +L
Sbjct: 121 NNLVVVDALKF 131
>gi|374611456|ref|ZP_09684242.1| ribosomal protein L4/L1e [Mycobacterium tusciae JS617]
gi|373549166|gb|EHP75839.1| ribosomal protein L4/L1e [Mycobacterium tusciae JS617]
Length = 225
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 80/135 (59%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + G + L +FD ++H+VV QLA ++QGTHSTKT EV G G
Sbjct: 6 LKIDVHTPAGKKDGSVELPAALFDAEANIALMHQVVEAQLAAKRQGTHSTKTRGEVRGGG 65
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTGRAR G+ R PQF GG +HGP+PR ++ + KK+ L+ ALS RA G
Sbjct: 66 KKPYRQKGTGRARQGSTRAPQFTGGGVVHGPQPRDYSQRTPKKMIAAALRGALSDRARNG 125
Query: 219 KVSLSVSLSLFLRPS 233
++ L PS
Sbjct: 126 RIHAVTELVEGQAPS 140
>gi|319654869|ref|ZP_08008944.1| 50S ribosomal protein L4 [Bacillus sp. 2_A_57_CT2]
gi|317393432|gb|EFV74195.1| 50S ribosomal protein L4 [Bacillus sp. 2_A_57_CT2]
Length = 207
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 79/123 (64%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN+ G + L +F + + ++ + Q A +QGTH TK SEV+G
Sbjct: 1 MPKVALFNQSGSKVGDIELNDAIFGIEPNQHVLFEAIVMQRASLRQGTHKTKIRSEVAGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLE 120
Query: 218 GKV 220
+
Sbjct: 121 ENI 123
>gi|452955096|gb|EME60496.1| 50S ribosomal protein L4 [Amycolatopsis decaplanina DSM 44594]
Length = 228
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 77/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA +QGTH TKT EV G GKKP+RQKGTGRAR
Sbjct: 15 GTVELPSEIFDVQANVPLMHQVVVAQLAAARQGTHDTKTRGEVRGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGP PR + + KK++ L+ ALS RA G++ + L +
Sbjct: 75 QGSTRAPQFTGGGVVHGPTPRDYTQRTPKKMKAAALRGALSDRARAGQLHVVTELVTGEK 134
Query: 232 PS 233
PS
Sbjct: 135 PS 136
>gi|307709911|ref|ZP_07646358.1| 50S ribosomal protein L4 (BL4) [Streptococcus mitis SK564]
gi|307711053|ref|ZP_07647475.1| 50S ribosomal protein L4 (BL4) [Streptococcus mitis SK321]
gi|322388400|ref|ZP_08062003.1| 50S ribosomal protein L4 [Streptococcus infantis ATCC 700779]
gi|335030309|ref|ZP_08523802.1| 50S ribosomal protein L4 [Streptococcus infantis SK1076]
gi|385260456|ref|ZP_10038602.1| 50S ribosomal protein L4 [Streptococcus sp. SK140]
gi|417847675|ref|ZP_12493637.1| 50S ribosomal protein L4 [Streptococcus mitis SK1073]
gi|417923530|ref|ZP_12566994.1| 50S ribosomal protein L4 [Streptococcus mitis SK569]
gi|417937378|ref|ZP_12580681.1| 50S ribosomal protein L4 [Streptococcus infantis X]
gi|418966666|ref|ZP_13518389.1| 50S ribosomal protein L4 [Streptococcus mitis SK616]
gi|419842833|ref|ZP_14366165.1| 50S ribosomal protein L4 [Streptococcus infantis ATCC 700779]
gi|421276538|ref|ZP_15727360.1| 50S ribosomal protein L4 [Streptococcus mitis SPAR10]
gi|422881238|ref|ZP_16927694.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK355]
gi|307617015|gb|EFN96193.1| 50S ribosomal protein L4 (BL4) [Streptococcus mitis SK321]
gi|307619282|gb|EFN98411.1| 50S ribosomal protein L4 (BL4) [Streptococcus mitis SK564]
gi|321140713|gb|EFX36215.1| 50S ribosomal protein L4 [Streptococcus infantis ATCC 700779]
gi|332364964|gb|EGJ42732.1| 50S ribosomal protein L4 [Streptococcus sanguinis SK355]
gi|334266557|gb|EGL85034.1| 50S ribosomal protein L4 [Streptococcus infantis SK1076]
gi|339456509|gb|EGP69100.1| 50S ribosomal protein L4 [Streptococcus mitis SK1073]
gi|342836915|gb|EGU71119.1| 50S ribosomal protein L4 [Streptococcus mitis SK569]
gi|343398829|gb|EGV11357.1| 50S ribosomal protein L4 [Streptococcus infantis X]
gi|383346735|gb|EID24756.1| 50S ribosomal protein L4 [Streptococcus mitis SK616]
gi|385191300|gb|EIF38716.1| 50S ribosomal protein L4 [Streptococcus sp. SK140]
gi|385703410|gb|EIG40528.1| 50S ribosomal protein L4 [Streptococcus infantis ATCC 700779]
gi|395877014|gb|EJG88085.1| 50S ribosomal protein L4 [Streptococcus mitis SPAR10]
Length = 207
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 72/108 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLNDAIFGIEPNQSVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAENK 122
>gi|451340312|ref|ZP_21910809.1| LSU ribosomal protein L4p (L1e) [Amycolatopsis azurea DSM 43854]
gi|449416868|gb|EMD22570.1| LSU ribosomal protein L4p (L1e) [Amycolatopsis azurea DSM 43854]
Length = 228
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 77/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA +QGTH TKT EV G GKKP+RQKGTGRAR
Sbjct: 15 GTVELPSEIFDVQANVPLMHQVVVGQLAAARQGTHDTKTRGEVRGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGP PR + + KK++ L+ ALS RA G++ + L +
Sbjct: 75 QGSTRAPQFTGGGVVHGPTPRDYTQRTPKKMKAAALRGALSDRARAGQLHVVTELVTGEK 134
Query: 232 PS 233
PS
Sbjct: 135 PS 136
>gi|227494546|ref|ZP_03924862.1| ribosomal protein L4 [Actinomyces coleocanis DSM 15436]
gi|226832280|gb|EEH64663.1| ribosomal protein L4 [Actinomyces coleocanis DSM 15436]
Length = 212
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 83/133 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T + G + L +FD +IH+VV QLA +QGTH+TKT +V+G GKK
Sbjct: 5 VEITGVNGKSAGTIELPAAIFDAETNVPLIHQVVVAQLAAARQGTHATKTRGQVAGGGKK 64
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G++R P F GG +HGP+PR ++ + KK++ L ALS RA G++
Sbjct: 65 PYRQKGTGRARQGSIRAPHFTGGGVVHGPQPRDYSQRTPKKMKAGALYGALSDRARNGRI 124
Query: 221 SLSVSLSLFLRPS 233
+ ++ +PS
Sbjct: 125 HVVTAVVEGEKPS 137
>gi|373469454|ref|ZP_09560640.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371764414|gb|EHO52825.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 129
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 76/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 ISVFNIEGKEVGSIELNDAVFGVNVNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PW+QKGTG AR G+ R PQ++GG + P PR + I LNKK +R+ LK AL++R E K
Sbjct: 64 PWKQKGTGHARQGSTRSPQWKGGGVVFAPTPRDYTINLNKKEKRIALKSALTSRVLENK 122
>gi|417928248|ref|ZP_12571636.1| 50S ribosomal protein L4 [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340766122|gb|EGR88648.1| 50S ribosomal protein L4 [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
Length = 207
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 81/134 (60%), Gaps = 6/134 (4%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS---- 235
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K LS F P +
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVEGLS-FAAPKTAEFAK 141
Query: 236 -LSLKNTDTHVHIV 248
LS N DT V ++
Sbjct: 142 VLSALNIDTKVLVL 155
>gi|307708061|ref|ZP_07644529.1| ribosomal protein L4/L1 family [Streptococcus mitis NCTC 12261]
gi|418977454|ref|ZP_13525272.1| 50S ribosomal protein L4 [Streptococcus mitis SK575]
gi|307615846|gb|EFN95051.1| ribosomal protein L4/L1 family [Streptococcus mitis NCTC 12261]
gi|383349895|gb|EID27812.1| 50S ribosomal protein L4 [Streptococcus mitis SK575]
Length = 207
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 72/108 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLNDAIFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAENK 122
>gi|397698733|ref|YP_006536521.1| 50S ribosomal protein L4 [Enterococcus faecalis D32]
gi|397335372|gb|AFO43044.1| 50S ribosomal protein L4 [Enterococcus faecalis D32]
Length = 207
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 89/156 (57%), Gaps = 9/156 (5%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L ++F + + +++ + Q A +QGTH+ K S V G
Sbjct: 1 MPNVALFKQDGTQNGEITLNEEIFGIEPNESVVYDAIIMQRASLRQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS + AE
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSDKVAE 120
Query: 218 GKVSLSVSLSLFLRP---SFSLSLKN--TDTHVHIV 248
+ LS F P F L N DT V +V
Sbjct: 121 NNLVAVEGLS-FDAPKTKEFKQVLANLSIDTKVLVV 155
>gi|379749055|ref|YP_005339876.1| 50S ribosomal protein L4 [Mycobacterium intracellulare ATCC 13950]
gi|378801419|gb|AFC45555.1| 50S ribosomal protein L4 [Mycobacterium intracellulare ATCC 13950]
Length = 223
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 82/135 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + +G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G
Sbjct: 9 LKIDVKTPAGKVEGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGG 68
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KP+RQKGTGRAR G+ R PQF GG +HGPKPR ++ + KK+ L+ ALS RA G
Sbjct: 69 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 128
Query: 219 KVSLSVSLSLFLRPS 233
++ + PS
Sbjct: 129 RIHAVTEIVAGQTPS 143
>gi|452943479|ref|YP_007499644.1| ribosomal protein L4/L1e [Hydrogenobaculum sp. HO]
gi|452881897|gb|AGG14601.1| ribosomal protein L4/L1e [Hydrogenobaculum sp. HO]
Length = 200
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 74/111 (66%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L DVF+V +K I+ VVRWQLAKR+QGTHSTKT +EV+ + KK QKGTG ARHG
Sbjct: 8 LRDDVFNVEPKKHILWDVVRWQLAKRRQGTHSTKTRAEVNCSKKKILPQKGTGNARHGAR 67
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSL 226
F GG +HGPKPR + KL+KK R++ L +ALS +A V + SL
Sbjct: 68 SANIFVGGGVVHGPKPRDYEYKLSKKYRKIALAMALSTKAKNNSVYVLESL 118
>gi|405980231|ref|ZP_11038571.1| 50S ribosomal protein L4 [Actinomyces turicensis ACS-279-V-Col4]
gi|404390683|gb|EJZ85750.1| 50S ribosomal protein L4 [Actinomyces turicensis ACS-279-V-Col4]
Length = 214
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 81/123 (65%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDVP ++H+VV QLA +QGTH+TKT VSG GKKP+RQKGTG AR G++
Sbjct: 22 LPAEIFDVPTNIPLMHQVVVAQLAAARQGTHATKTRGMVSGGGKKPFRQKGTGNARQGSI 81
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS 235
R P F GG +HGP+PR + + KK+++ L+ ALS RA G++ + +L +PS
Sbjct: 82 RAPHFTGGGIVHGPQPRDYDQRTPKKMKQGALRSALSDRARAGRIHIVTALIEGEKPSTK 141
Query: 236 LSL 238
+L
Sbjct: 142 SAL 144
>gi|210611126|ref|ZP_03288740.1| hypothetical protein CLONEX_00930 [Clostridium nexile DSM 1787]
gi|210152113|gb|EEA83120.1| hypothetical protein CLONEX_00930 [Clostridium nexile DSM 1787]
Length = 206
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 74/119 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVGTIDLNDAVFGVEVNEHLLHMAVVNQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PR ++ KLNKK +R LK AL+ R E K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYSFKLNKKEKRAALKSALTTRVLENK 122
>gi|428162639|gb|EKX31763.1| hypothetical protein GUITHDRAFT_166830 [Guillardia theta CCMP2712]
Length = 340
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 74/117 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G LA VF P+R DI++RVV WQ A + K + VSG GKKPW QK TGRAR
Sbjct: 93 GTCQLASAVFQEPLRVDILNRVVLWQRAGWRTIARIAKNRNMVSGGGKKPWAQKKTGRAR 152
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
G++R P FR G HGP RS AI + KKVRRLG+++A+S+R EGKV + S L
Sbjct: 153 QGSIRAPHFRHGGKAHGPVQRSFAIDMPKKVRRLGVRVAMSSRMREGKVWIVESEKL 209
>gi|319948722|ref|ZP_08022843.1| 50S ribosomal protein L4 [Dietzia cinnamea P4]
gi|319437624|gb|EFV92623.1| 50S ribosomal protein L4 [Dietzia cinnamea P4]
Length = 229
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 88/148 (59%), Gaps = 4/148 (2%)
Query: 88 TPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHS 147
T + T+ L D+ P G + L ++F V ++H+VV QLA +QGTHS
Sbjct: 3 TTENTVNLKLDVRTPA----GSTDGSVELPAEIFGVEPNLPLMHQVVVAQLAAARQGTHS 58
Query: 148 TKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGL 207
TKT EVSG G+KP+RQKGTGRAR G+ R P + GG T+HGPKPR ++ + KK++ L
Sbjct: 59 TKTRGEVSGGGRKPFRQKGTGRARQGSTRAPAYTGGGTVHGPKPRDYSQRTPKKMKAAAL 118
Query: 208 KIALSARAAEGKVSLSVSLSLFLRPSFS 235
+ ALS RAA ++ + +PS S
Sbjct: 119 RGALSDRAASERIHVVTEFVEGQKPSTS 146
>gi|227499194|ref|ZP_03929329.1| 50S ribosomal protein L4/L1e [Acidaminococcus sp. D21]
gi|352685684|ref|YP_004897669.1| 50S ribosomal protein L4 [Acidaminococcus intestini RyC-MR95]
gi|226904641|gb|EEH90559.1| 50S ribosomal protein L4/L1e [Acidaminococcus sp. D21]
gi|350280339|gb|AEQ23529.1| 50S ribosomal protein L4/L1e [Acidaminococcus intestini RyC-MR95]
Length = 209
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 74/109 (67%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VF V + ++H+ V Q A +QGTH+TKT V G G+KPW+QKGTGRAR G++R P
Sbjct: 24 VFGVEFNEAVVHQAVVMQQANERQGTHATKTRGMVRGGGRKPWKQKGTGRARAGSVRSPL 83
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
+ GG T+ GP PRSHAI + +K RRL ++ ALS++ A+G + + LS
Sbjct: 84 WVGGGTIFGPSPRSHAIDMPRKARRLAIRCALSSKVADGSLVIVDGLSF 132
>gi|7674307|sp|Q9ZI49.1|RL4_AQUPY RecName: Full=50S ribosomal protein L4
gi|4165866|gb|AAD08786.1| ribosomal protein L4 [Aquifex pyrophilus]
Length = 199
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 79/122 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + + DVF+V ++K ++ VV+WQLAKR+QGTHSTKT EV+ +G+K QKGTG AR
Sbjct: 4 GDVEVRDDVFNVKVKKHVLWEVVKWQLAKRRQGTHSTKTRGEVAYSGRKILPQKGTGNAR 63
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
HG F GG HGPKPR + L KKVR+LGLK+ALS +A + ++ L +
Sbjct: 64 HGERGVNIFVGGGVAHGPKPRDYEYPLPKKVRKLGLKMALSDKAQNDAIMFVDNIDLGEQ 123
Query: 232 PS 233
P
Sbjct: 124 PK 125
>gi|256827415|ref|YP_003151374.1| 50S ribosomal protein L4P [Cryptobacterium curtum DSM 15641]
gi|256583558|gb|ACU94692.1| LSU ribosomal protein L4P [Cryptobacterium curtum DSM 15641]
Length = 207
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L VF + ++H+VVR Q A +QGTH T T +V G GKKPWRQKGTGRAR G++
Sbjct: 19 LNAGVFGIEPNVHVMHQVVRAQRASWRQGTHDTLTRGQVRGGGKKPWRQKGTGRARQGSI 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS 235
R PQ+RGG T+ GP PRS+A ++N K +L ++ ALSA+ A+G+ LF+ SF
Sbjct: 79 RSPQWRGGGTVFGPHPRSYAFRVNNKEVKLAMRSALSAKLADGE--------LFVVDSFG 130
Query: 236 LS 237
Sbjct: 131 FE 132
>gi|160881784|ref|YP_001560752.1| 50S ribosomal protein L4 [Clostridium phytofermentans ISDg]
gi|189029497|sp|A9KJJ3.1|RL4_CLOPH RecName: Full=50S ribosomal protein L4
gi|160430450|gb|ABX44013.1| ribosomal protein L4/L1e [Clostridium phytofermentans ISDg]
Length = 206
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 83/128 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L +F V + + ++H V QLA ++QGT S KT +EVSG G+K
Sbjct: 4 VKVYNIEGKEVGSLELNDAIFGVEVNEHLMHMAVVSQLANKRQGTQSAKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ++GG + PKPR ++ K+N+K + L +K AL++R K+
Sbjct: 64 PWRQKGTGHARQGSTRSPQWKGGGVVFAPKPRDYSFKMNRKEKSLAIKSALTSRVEAQKL 123
Query: 221 SLSVSLSL 228
+ S+++
Sbjct: 124 IVLDSMNM 131
>gi|342215804|ref|ZP_08708451.1| 50S ribosomal protein L4 [Peptoniphilus sp. oral taxon 375 str.
F0436]
gi|341586694|gb|EGS30094.1| 50S ribosomal protein L4 [Peptoniphilus sp. oral taxon 375 str.
F0436]
Length = 206
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 77/113 (68%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L D+FDV + + ++ VV+ LA R+QGT S KT +EV G G+KPWRQKGTGRAR G++
Sbjct: 19 LKKDIFDVEVNEHAVYLVVKNILANRRQGTQSAKTRAEVRGGGRKPWRQKGTGRARQGSI 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
R PQ++GG + PKPR ++ KKV+RL L+ L+++ E ++ L +L L
Sbjct: 79 RSPQWKGGGVVFAPKPRDYSYTTPKKVKRLALRSVLTSKVQENELILVDALKL 131
>gi|157690901|ref|YP_001485363.1| 50S ribosomal protein L4 [Bacillus pumilus SAFR-032]
gi|194017590|ref|ZP_03056201.1| ribosomal protein L4/L1 family [Bacillus pumilus ATCC 7061]
gi|166990946|sp|A8F986.1|RL4_BACP2 RecName: Full=50S ribosomal protein L4
gi|157679659|gb|ABV60803.1| ribosomal protein L4 [Bacillus pumilus SAFR-032]
gi|194010862|gb|EDW20433.1| ribosomal protein L4/L1 family [Bacillus pumilus ATCC 7061]
Length = 207
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L VF + + ++ + Q A +QGTH KT SEV G
Sbjct: 1 MPKVALFNQNGSTNGEIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS++ +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVID 120
Query: 218 GKVSLSVSLSL 228
+ + L+L
Sbjct: 121 NNIIVLEDLTL 131
>gi|149203512|ref|ZP_01880482.1| 50S ribosomal protein L4 [Roseovarius sp. TM1035]
gi|149143345|gb|EDM31384.1| 50S ribosomal protein L4 [Roseovarius sp. TM1035]
Length = 205
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 69/107 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+F + R DI+HRVVRWQ K Q GTH KT SE S + KK +RQKGTG AR
Sbjct: 14 GSVDLGEDIFGLEPRADILHRVVRWQRNKAQAGTHKVKTRSETSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
HG P FR G GP PRSHA L KKVR LGLK ALSA+A G
Sbjct: 74 HGDKNAPIFRHGGIYKGPTPRSHAHDLPKKVRALGLKHALSAKAKAG 120
>gi|385261729|ref|ZP_10039846.1| 50S ribosomal protein L4 [Streptococcus sp. SK643]
gi|385192451|gb|EIF39856.1| 50S ribosomal protein L4 [Streptococcus sp. SK643]
Length = 207
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK S + AE K
Sbjct: 72 RARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSEKVAENK 122
>gi|375093423|ref|ZP_09739688.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
marina XMU15]
gi|374654156|gb|EHR48989.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
marina XMU15]
Length = 223
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 79/123 (64%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G + L ++FDV ++H+VV QLA +QGTH TKT EV G G+KP+RQKGTGRA
Sbjct: 15 EGTVELPAEIFDVQANIPLMHQVVVAQLAAARQGTHDTKTRGEVRGGGRKPYRQKGTGRA 74
Query: 171 RHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFL 230
R G++R PQF GG T+HGP PR + + KK++ L+ ALS RA ++ + L
Sbjct: 75 RQGSVRAPQFTGGGTVHGPTPRDYTQRTPKKMKAAALRGALSDRARSEQLHVVTELVSSE 134
Query: 231 RPS 233
+PS
Sbjct: 135 KPS 137
>gi|282857361|ref|ZP_06266598.1| ribosomal protein, L4/L1 family [Pyramidobacter piscolens W5455]
gi|282584861|gb|EFB90192.1| ribosomal protein, L4/L1 family [Pyramidobacter piscolens W5455]
Length = 207
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 75/118 (63%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
VI + N E G L+ +VF + +H+VV QLA +QGT STK EV G GK
Sbjct: 3 VIKIMNISGEVVGEKTLSDEVFGASVHVSAMHQVVVAQLAHARQGTASTKMRGEVRGGGK 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
KPW+QK TGRAR G+ R P + GG +HGPKPRS+ +K+NKKVR L ++ ALS R E
Sbjct: 63 KPWKQKHTGRARAGSSRSPLWVGGGVVHGPKPRSYDLKVNKKVRALAMRSALSMRVIE 120
>gi|297564038|ref|YP_003683011.1| 50S ribosomal protein L4 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848487|gb|ADH70505.1| ribosomal protein L4/L1e [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 223
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 80/122 (65%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N KG + L VF + +IH+VV QLA +QGTH+TKT +V G GKK
Sbjct: 4 IEVKNPEGGTKGSVELPDTVFAQQVSIPLIHQVVNAQLAAGRQGTHATKTRGDVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G++R PQ+ GG T+HGP+PR ++ + KK++ L+ ALS RA G++
Sbjct: 64 PYRQKGTGRARQGSIRAPQYTGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARHGRI 123
Query: 221 SL 222
+
Sbjct: 124 HV 125
>gi|41410260|ref|NP_963096.1| 50S ribosomal protein L4 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|417747841|ref|ZP_12396299.1| 50S ribosomal protein L4, bacterial/organelle [Mycobacterium avium
subsp. paratuberculosis S397]
gi|440779638|ref|ZP_20958350.1| 50S ribosomal protein L4 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|46577156|sp|P61066.1|RL4_MYCPA RecName: Full=50S ribosomal protein L4
gi|41399094|gb|AAS06712.1| RplD [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336460667|gb|EGO39558.1| 50S ribosomal protein L4, bacterial/organelle [Mycobacterium avium
subsp. paratuberculosis S397]
gi|436719835|gb|ELP44175.1| 50S ribosomal protein L4 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 217
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 78/123 (63%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G+KP+RQKGTGRA
Sbjct: 15 EGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGGRKPYRQKGTGRA 74
Query: 171 RHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFL 230
R G+ R PQF GG +HGPKPR ++ + KK+ L+ ALS RA G++ L
Sbjct: 75 RQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAITELVSGQ 134
Query: 231 RPS 233
PS
Sbjct: 135 TPS 137
>gi|118466008|ref|YP_883605.1| 50S ribosomal protein L4 [Mycobacterium avium 104]
gi|254776906|ref|ZP_05218422.1| 50S ribosomal protein L4 [Mycobacterium avium subsp. avium ATCC
25291]
gi|166234686|sp|A0QL17.1|RL4_MYCA1 RecName: Full=50S ribosomal protein L4
gi|118167295|gb|ABK68192.1| ribosomal protein L4/L1 family protein [Mycobacterium avium 104]
Length = 217
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 78/123 (63%)
Query: 111 KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRA 170
+G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G+KP+RQKGTGRA
Sbjct: 15 EGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGGRKPYRQKGTGRA 74
Query: 171 RHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFL 230
R G+ R PQF GG +HGPKPR ++ + KK+ L+ ALS RA G++ L
Sbjct: 75 RQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAITELVSGQ 134
Query: 231 RPS 233
PS
Sbjct: 135 TPS 137
>gi|148983608|ref|ZP_01816927.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP3-BS71]
gi|194397434|ref|YP_002036911.1| 50S ribosomal protein L4 [Streptococcus pneumoniae G54]
gi|221231114|ref|YP_002510266.1| 50S ribosomal protein L4 [Streptococcus pneumoniae ATCC 700669]
gi|270292001|ref|ZP_06198216.1| ribosomal protein L4 [Streptococcus sp. M143]
gi|306828784|ref|ZP_07461976.1| ribosomal protein L4/L1 family protein [Streptococcus mitis ATCC
6249]
gi|315612333|ref|ZP_07887246.1| ribosomal protein L4/L1 family protein [Streptococcus sanguinis
ATCC 49296]
gi|322375038|ref|ZP_08049552.1| ribosomal protein L4/L1 family protein [Streptococcus sp. C300]
gi|322377229|ref|ZP_08051721.1| ribosomal protein L4/L1 family protein [Streptococcus sp. M334]
gi|331267135|ref|YP_004326765.1| 50S ribosomal protein L4 [Streptococcus oralis Uo5]
gi|358465339|ref|ZP_09175289.1| 50S ribosomal protein L4 [Streptococcus sp. oral taxon 058 str.
F0407]
gi|387756770|ref|YP_006063749.1| 50S ribosomal protein L4 [Streptococcus pneumoniae OXC141]
gi|406587691|ref|ZP_11062539.1| 50S ribosomal protein L4 [Streptococcus sp. GMD1S]
gi|415696752|ref|ZP_11456394.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 459-5]
gi|415748587|ref|ZP_11476639.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SV35]
gi|415751313|ref|ZP_11478548.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SV36]
gi|417693135|ref|ZP_12342324.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47901]
gi|417916536|ref|ZP_12560113.1| 50S ribosomal protein L4 [Streptococcus mitis bv. 2 str. SK95]
gi|417933632|ref|ZP_12576952.1| 50S ribosomal protein L4 [Streptococcus mitis bv. 2 str. F0392]
gi|418073089|ref|ZP_12710352.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11184]
gi|418104287|ref|ZP_12741347.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44500]
gi|418120328|ref|ZP_12757276.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44194]
gi|418122534|ref|ZP_12759469.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44378]
gi|418127116|ref|ZP_12764014.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP170]
gi|418136280|ref|ZP_12773124.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11663]
gi|418165835|ref|ZP_12802493.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17971]
gi|418172615|ref|ZP_12809229.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41277]
gi|418177263|ref|ZP_12813848.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41565]
gi|418184001|ref|ZP_12820550.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47283]
gi|418215689|ref|ZP_12842415.1| 50S ribosomal protein L4 [Streptococcus pneumoniae
Netherlands15B-37]
gi|418231353|ref|ZP_12857942.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA07228]
gi|418235647|ref|ZP_12862216.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19690]
gi|419430658|ref|ZP_13970804.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP05]
gi|419432862|ref|ZP_13972984.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40183]
gi|419441647|ref|ZP_13981682.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13224]
gi|419463473|ref|ZP_14003369.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04175]
gi|419468134|ref|ZP_14008007.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA06083]
gi|419472322|ref|ZP_14012175.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13430]
gi|419479109|ref|ZP_14018921.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19101]
gi|419490196|ref|ZP_14029938.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47179]
gi|419492384|ref|ZP_14032112.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47210]
gi|419496647|ref|ZP_14036359.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47522]
gi|419498805|ref|ZP_14038505.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47597]
gi|419509550|ref|ZP_14049195.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP141]
gi|419529340|ref|ZP_14068875.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40028]
gi|419533661|ref|ZP_14073169.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17457]
gi|419767568|ref|ZP_14293718.1| 50S ribosomal protein L4 [Streptococcus mitis SK579]
gi|419778283|ref|ZP_14304176.1| 50S ribosomal protein L4 [Streptococcus oralis SK10]
gi|419781567|ref|ZP_14307385.1| 50S ribosomal protein L4 [Streptococcus oralis SK100]
gi|421212250|ref|ZP_15669216.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070108]
gi|421214474|ref|ZP_15671409.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070109]
gi|421280252|ref|ZP_15731051.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04672]
gi|421288889|ref|ZP_15739641.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA54354]
gi|421297671|ref|ZP_15748366.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA60080]
gi|421304205|ref|ZP_15754863.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA62331]
gi|421308681|ref|ZP_15759312.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA62681]
gi|226730730|sp|B5E6F6.1|RL4_STRP4 RecName: Full=50S ribosomal protein L4
gi|254803756|sp|B8ZKF8.1|RL4_STRPJ RecName: Full=50S ribosomal protein L4
gi|74267363|dbj|BAE44179.1| ribosomal protein L4 [Streptococcus pneumoniae]
gi|147923755|gb|EDK74867.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SP3-BS71]
gi|194357101|gb|ACF55549.1| 50S ribosomal protein L4 [Streptococcus pneumoniae G54]
gi|220673574|emb|CAR68060.1| 50S ribosomal protein L4 [Streptococcus pneumoniae ATCC 700669]
gi|270279529|gb|EFA25371.1| ribosomal protein L4 [Streptococcus sp. M143]
gi|301799359|emb|CBW31894.1| 50S ribosomal protein L4 [Streptococcus pneumoniae OXC141]
gi|304428962|gb|EFM32050.1| ribosomal protein L4/L1 family protein [Streptococcus mitis ATCC
6249]
gi|315315314|gb|EFU63353.1| ribosomal protein L4/L1 family protein [Streptococcus sanguinis
ATCC 49296]
gi|321280538|gb|EFX57577.1| ribosomal protein L4/L1 family protein [Streptococcus sp. C300]
gi|321281942|gb|EFX58950.1| ribosomal protein L4/L1 family protein [Streptococcus sp. M334]
gi|326683807|emb|CBZ01425.1| 50S ribosomal protein L4 [Streptococcus oralis Uo5]
gi|332204218|gb|EGJ18283.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47901]
gi|340770202|gb|EGR92717.1| 50S ribosomal protein L4 [Streptococcus mitis bv. 2 str. F0392]
gi|342829427|gb|EGU63781.1| 50S ribosomal protein L4 [Streptococcus mitis bv. 2 str. SK95]
gi|353752627|gb|EHD33252.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11184]
gi|353778721|gb|EHD59187.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44500]
gi|353794883|gb|EHD75235.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44194]
gi|353798007|gb|EHD78337.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA44378]
gi|353800921|gb|EHD81229.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP170]
gi|353831930|gb|EHE12053.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17971]
gi|353839314|gb|EHE19388.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41277]
gi|353845705|gb|EHE25745.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA41565]
gi|353852470|gb|EHE32458.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47283]
gi|353874595|gb|EHE54450.1| 50S ribosomal protein L4 [Streptococcus pneumoniae
Netherlands15B-37]
gi|353889019|gb|EHE68791.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA07228]
gi|353893576|gb|EHE73321.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19690]
gi|353903338|gb|EHE78862.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA11663]
gi|357065834|gb|EHI76009.1| 50S ribosomal protein L4 [Streptococcus sp. oral taxon 058 str.
F0407]
gi|379540752|gb|EHZ05923.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04175]
gi|379548404|gb|EHZ13536.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA06083]
gi|379553224|gb|EHZ18308.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13430]
gi|379555143|gb|EHZ20212.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA13224]
gi|379568623|gb|EHZ33602.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA17457]
gi|379573932|gb|EHZ38878.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA19101]
gi|379576244|gb|EHZ41172.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40028]
gi|379578984|gb|EHZ43892.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA40183]
gi|379596081|gb|EHZ60886.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47210]
gi|379596476|gb|EHZ61280.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47179]
gi|379602772|gb|EHZ67542.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47522]
gi|379603693|gb|EHZ68461.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA47597]
gi|379631902|gb|EHZ96478.1| 50S ribosomal protein L4 [Streptococcus pneumoniae EU-NP05]
gi|379634736|gb|EHZ99300.1| 50S ribosomal protein L4 [Streptococcus pneumoniae NP141]
gi|381310918|gb|EIC51743.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SV36]
gi|381318844|gb|EIC59561.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SV35]
gi|381319845|gb|EIC60527.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 459-5]
gi|383184055|gb|EIC76583.1| 50S ribosomal protein L4 [Streptococcus oralis SK100]
gi|383187298|gb|EIC79751.1| 50S ribosomal protein L4 [Streptococcus oralis SK10]
gi|383352932|gb|EID30562.1| 50S ribosomal protein L4 [Streptococcus mitis SK579]
gi|395582095|gb|EJG42558.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070108]
gi|395582827|gb|EJG43277.1| 50S ribosomal protein L4 [Streptococcus pneumoniae 2070109]
gi|395883609|gb|EJG94651.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA04672]
gi|395890149|gb|EJH01155.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA54354]
gi|395904814|gb|EJH15726.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA60080]
gi|395906596|gb|EJH17494.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA62331]
gi|395912826|gb|EJH23683.1| 50S ribosomal protein L4 [Streptococcus pneumoniae GA62681]
gi|404472830|gb|EKA17233.1| 50S ribosomal protein L4 [Streptococcus sp. GMD1S]
gi|429317205|emb|CCP36958.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPN034156]
gi|429318746|emb|CCP31949.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPN034183]
gi|429320559|emb|CCP33922.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPN994039]
gi|429322379|emb|CCP29963.1| 50S ribosomal protein L4 [Streptococcus pneumoniae SPN994038]
Length = 207
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK S + AE K
Sbjct: 72 RARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSEKVAENK 122
>gi|392414830|ref|YP_006451435.1| LSU ribosomal protein L4P [Mycobacterium chubuense NBB4]
gi|390614606|gb|AFM15756.1| LSU ribosomal protein L4P [Mycobacterium chubuense NBB4]
Length = 232
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 78/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA ++QGTH+TKT EVSG GKKP+RQKGTGRAR
Sbjct: 16 GSIELPAELFDVEPNIALMHQVVTAQLAAKRQGTHATKTRGEVSGGGKKPYRQKGTGRAR 75
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG +HGP+PR ++ + KK+ L+ ALS RA ++ L
Sbjct: 76 QGSTRAPQFTGGGVVHGPQPRDYSQRTPKKMIAAALRGALSDRARNDRIHAVTELVEGQT 135
Query: 232 PS 233
PS
Sbjct: 136 PS 137
>gi|256852037|ref|ZP_05557424.1| ribosomal protein L4/L1 [Lactobacillus jensenii 27-2-CHN]
gi|260661394|ref|ZP_05862307.1| ribosomal protein L4/L1 [Lactobacillus jensenii 115-3-CHN]
gi|256615449|gb|EEU20639.1| ribosomal protein L4/L1 [Lactobacillus jensenii 27-2-CHN]
gi|260547849|gb|EEX23826.1| ribosomal protein L4/L1 [Lactobacillus jensenii 115-3-CHN]
Length = 205
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 78/120 (65%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
+D G + L +VF + ++++ V Q A +QGTH+TK S V G GKKPWRQKGTG
Sbjct: 12 KDAGEVTLNDNVFGIEPNENVVFDAVIRQRAGMRQGTHATKNRSAVRGGGKKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG T+ GP PRS+A L +KVRRL +K LS + + + + LSL
Sbjct: 72 RARQGSIRAPQWRGGGTVFGPTPRSYAYSLPRKVRRLAIKSVLSQKLQDNNLIILDQLSL 131
>gi|355575077|ref|ZP_09044644.1| 50S ribosomal protein L4/L1 [Olsenella sp. oral taxon 809 str.
F0356]
gi|354817721|gb|EHF02216.1| 50S ribosomal protein L4/L1 [Olsenella sp. oral taxon 809 str.
F0356]
Length = 207
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 81/128 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + G + L+ +VF + ++H+VV A +QGTHSTK S VSG G K
Sbjct: 4 IEVKNVEGKAAGTVELSDNVFGIEPNIPVMHQVVVAYEASLRQGTHSTKNRSAVSGGGVK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR GT+R PQF GG + GP P SHA++ N K ++L ++ ALS + A+ ++
Sbjct: 64 PFRQKGTGRARQGTIRAPQFTGGGVVFGPTPHSHALRANNKEKKLAMRSALSGKLADSQL 123
Query: 221 SLSVSLSL 228
L LSL
Sbjct: 124 FLIDELSL 131
>gi|312867055|ref|ZP_07727266.1| 50S ribosomal protein L4 [Streptococcus parasanguinis F0405]
gi|322390661|ref|ZP_08064175.1| 50S ribosomal protein L4 [Streptococcus parasanguinis ATCC 903]
gi|337283076|ref|YP_004622547.1| 50S ribosomal protein L4 [Streptococcus parasanguinis ATCC 15912]
gi|387878656|ref|YP_006308959.1| 50S ribosomal protein L4 [Streptococcus parasanguinis FW213]
gi|414156632|ref|ZP_11412933.1| 50S ribosomal protein L4 [Streptococcus sp. F0442]
gi|419800160|ref|ZP_14325459.1| 50S ribosomal protein L4 [Streptococcus parasanguinis F0449]
gi|311097537|gb|EFQ55770.1| 50S ribosomal protein L4 [Streptococcus parasanguinis F0405]
gi|321142634|gb|EFX38098.1| 50S ribosomal protein L4 [Streptococcus parasanguinis ATCC 903]
gi|335370669|gb|AEH56619.1| 50S ribosomal protein L4 [Streptococcus parasanguinis ATCC 15912]
gi|385696013|gb|EIG26536.1| 50S ribosomal protein L4 [Streptococcus parasanguinis F0449]
gi|386792113|gb|AFJ25148.1| Ribosomal protein L4 [Streptococcus parasanguinis FW213]
gi|410869625|gb|EKS17585.1| 50S ribosomal protein L4 [Streptococcus sp. F0442]
Length = 207
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 72/108 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLNDAIFGIEPNQAVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAENK 122
>gi|329768274|ref|ZP_08259775.1| 50S ribosomal protein L4 [Gemella haemolysans M341]
gi|328837473|gb|EGF87102.1| 50S ribosomal protein L4 [Gemella haemolysans M341]
Length = 207
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + F +D G + + VF + + ++ + V Q A +QGTH TK SEVSG
Sbjct: 1 MPQLDLFKQDGTKVGAVEASEAVFGIEPNQHVLFQAVTLQRASLRQGTHKTKGRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ K+ +K+RRL L+ ALS++ A
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSFKMPRKMRRLALRSALSSKVAA 120
Query: 218 GKVSLSVSLSL 228
+V SLS
Sbjct: 121 NEVFALESLSF 131
>gi|319945834|ref|ZP_08020084.1| 50S ribosomal protein L4 [Streptococcus australis ATCC 700641]
gi|417919410|ref|ZP_12562941.1| 50S ribosomal protein L4 [Streptococcus australis ATCC 700641]
gi|319747899|gb|EFW00143.1| 50S ribosomal protein L4 [Streptococcus australis ATCC 700641]
gi|342832791|gb|EGU67080.1| 50S ribosomal protein L4 [Streptococcus australis ATCC 700641]
Length = 207
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 72/108 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLNDAIFGIEPNQAVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAENK 122
>gi|293364346|ref|ZP_06611072.1| 50S ribosomal protein L4 [Streptococcus oralis ATCC 35037]
gi|307702687|ref|ZP_07639639.1| 50S ribosomal protein L4 (BL4) [Streptococcus oralis ATCC 35037]
gi|307704066|ref|ZP_07640995.1| 50S ribosomal protein L4 (BL4) [Streptococcus mitis SK597]
gi|419781973|ref|ZP_14307784.1| 50S ribosomal protein L4 [Streptococcus oralis SK610]
gi|291317192|gb|EFE57619.1| 50S ribosomal protein L4 [Streptococcus oralis ATCC 35037]
gi|307622356|gb|EFO01364.1| 50S ribosomal protein L4 (BL4) [Streptococcus mitis SK597]
gi|307623803|gb|EFO02788.1| 50S ribosomal protein L4 (BL4) [Streptococcus oralis ATCC 35037]
gi|383183614|gb|EIC76149.1| 50S ribosomal protein L4 [Streptococcus oralis SK610]
Length = 207
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK S + AE K
Sbjct: 72 RARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSEKVAENK 122
>gi|407978616|ref|ZP_11159445.1| 50S ribosomal protein L4 [Bacillus sp. HYC-10]
gi|407414812|gb|EKF36438.1| 50S ribosomal protein L4 [Bacillus sp. HYC-10]
Length = 207
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L VF + + ++ + Q A +QGTH KT SEV G
Sbjct: 1 MPKVALFNQNGSTNGEIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS++ +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVID 120
Query: 218 GKVSLSVSLSL 228
+ + L+L
Sbjct: 121 NNIIVLEDLTL 131
>gi|395784124|ref|ZP_10463963.1| 50S ribosomal protein L4 [Bartonella melophagi K-2C]
gi|395423879|gb|EJF90067.1| 50S ribosomal protein L4 [Bartonella melophagi K-2C]
Length = 206
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DLVI + + G + ++ +F + R+DI+ RVVRWQLA+RQQG H ++ S+V+ T
Sbjct: 2 DLVIKTLD--GNEAGKLKVSKHIFGLAPREDILQRVVRWQLARRQQGAHQSQGRSDVART 59
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G K ++QKGTGRARH + R PQFRGG H P RSH L KK R LGL +ALS +
Sbjct: 60 GAKMFKQKGTGRARHSSARAPQFRGGGKAHSPMARSHVHILPKKSRALGLCLALSVK 116
>gi|357237123|ref|ZP_09124466.1| 50S ribosomal protein L4 [Streptococcus criceti HS-6]
gi|356885105|gb|EHI75305.1| 50S ribosomal protein L4 [Streptococcus criceti HS-6]
Length = 207
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 82/134 (61%), Gaps = 6/134 (4%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKG GRAR G++R PQ
Sbjct: 23 VFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGNGRARQGSIRAPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS---- 235
+RGG + GP PRS+A K +KVRRL LK LSA+ AE K+ +LS F P +
Sbjct: 83 WRGGGVVFGPTPRSYAYKFPQKVRRLALKSVLSAKVAEEKLVAVDALS-FAAPKTAEFAK 141
Query: 236 -LSLKNTDTHVHIV 248
LS D+ V +V
Sbjct: 142 VLSALGIDSKVLVV 155
>gi|389573511|ref|ZP_10163585.1| ribosomal protein L4/L1 family [Bacillus sp. M 2-6]
gi|388426826|gb|EIL84637.1| ribosomal protein L4/L1 family [Bacillus sp. M 2-6]
Length = 207
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L VF + + ++ + Q A +QGTH KT SEV G
Sbjct: 1 MPKVALFNQNGSTNGEIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKTRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS++ +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVID 120
Query: 218 GKVSLSVSLSL 228
+ + L+L
Sbjct: 121 NNIIVLEDLTL 131
>gi|146317732|ref|YP_001197444.1| 50S ribosomal protein L4 [Streptococcus suis 05ZYH33]
gi|146319922|ref|YP_001199633.1| 50S ribosomal protein L4 [Streptococcus suis 98HAH33]
gi|253750988|ref|YP_003024129.1| 50S ribosomal protein L4 [Streptococcus suis SC84]
gi|253752888|ref|YP_003026028.1| 50S ribosomal protein L4 [Streptococcus suis P1/7]
gi|253754713|ref|YP_003027853.1| 50S ribosomal protein L4 [Streptococcus suis BM407]
gi|330831921|ref|YP_004400746.1| 50S ribosomal protein L4 [Streptococcus suis ST3]
gi|386577070|ref|YP_006073475.1| 50S ribosomal protein L4 [Streptococcus suis GZ1]
gi|386581117|ref|YP_006077521.1| 50S ribosomal protein L4 [Streptococcus suis SS12]
gi|386583202|ref|YP_006079605.1| 50S ribosomal protein L4 [Streptococcus suis D9]
gi|386585269|ref|YP_006081671.1| 50S ribosomal protein L4 [Streptococcus suis D12]
gi|386587349|ref|YP_006083750.1| 50S ribosomal protein L4 [Streptococcus suis A7]
gi|389855789|ref|YP_006358032.1| 50S ribosomal protein L4 [Streptococcus suis ST1]
gi|403060770|ref|YP_006648986.1| 50S ribosomal protein L4 [Streptococcus suis S735]
gi|417091720|ref|ZP_11956526.1| 50S ribosomal protein L4 [Streptococcus suis R61]
gi|166199915|sp|A4VYP4.1|RL4_STRS2 RecName: Full=50S ribosomal protein L4
gi|166199917|sp|A4VSF5.1|RL4_STRSY RecName: Full=50S ribosomal protein L4
gi|145688538|gb|ABP89044.1| Ribosomal protein L4 [Streptococcus suis 05ZYH33]
gi|145690728|gb|ABP91233.1| Ribosomal protein L4 [Streptococcus suis 98HAH33]
gi|251815277|emb|CAZ50843.1| 50S ribosomal protein L4 [Streptococcus suis SC84]
gi|251817177|emb|CAZ54899.1| 50S ribosomal protein L4 [Streptococcus suis BM407]
gi|251819133|emb|CAR44224.1| 50S ribosomal protein L4 [Streptococcus suis P1/7]
gi|292557532|gb|ADE30533.1| ribosomal protein L4 [Streptococcus suis GZ1]
gi|329306144|gb|AEB80560.1| 50S ribosomal protein L4 [Streptococcus suis ST3]
gi|353533026|gb|EHC02694.1| 50S ribosomal protein L4 [Streptococcus suis R61]
gi|353733263|gb|AER14273.1| 50S ribosomal protein L4 [Streptococcus suis SS12]
gi|353735348|gb|AER16357.1| 50S ribosomal protein L4 [Streptococcus suis D9]
gi|353737415|gb|AER18423.1| 50S ribosomal protein L4 [Streptococcus suis D12]
gi|353739507|gb|AER20514.1| 50S ribosomal protein L4 [Streptococcus suis ST1]
gi|354984510|gb|AER43408.1| 50S ribosomal protein L4 [Streptococcus suis A7]
gi|402808096|gb|AFQ99587.1| 50S ribosomal protein L4 [Streptococcus suis S735]
Length = 207
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 72/108 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLNDAIFGIEPNQAVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG + GP PRS+A KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGVVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAENK 122
>gi|312140917|ref|YP_004008253.1| 50S ribosomal protein l4 rpld [Rhodococcus equi 103S]
gi|325675445|ref|ZP_08155129.1| 50S ribosomal protein L4 [Rhodococcus equi ATCC 33707]
gi|311890256|emb|CBH49574.1| 50S ribosomal protein L4 RplD [Rhodococcus equi 103S]
gi|325553416|gb|EGD23094.1| 50S ribosomal protein L4 [Rhodococcus equi ATCC 33707]
Length = 221
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 82/135 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + G + L ++FD ++H+VV QLA +QGTHSTKT EV G G
Sbjct: 8 LTLDVKAAGGKTNGTVDLPSEIFDATANIALMHQVVVAQLAAARQGTHSTKTRGEVRGGG 67
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTGRAR G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS RA
Sbjct: 68 KKPYRQKGTGRARQGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARNE 127
Query: 219 KVSLSVSLSLFLRPS 233
++ + L PS
Sbjct: 128 RIHVITELVAGQVPS 142
>gi|289435897|ref|YP_003465769.1| hypothetical protein lse_2536 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|422423360|ref|ZP_16500313.1| ribosomal protein L4/L1 family [Listeria seeligeri FSL S4-171]
gi|289172141|emb|CBH28687.1| rplD [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313636112|gb|EFS01986.1| ribosomal protein L4/L1 family [Listeria seeligeri FSL S4-171]
Length = 207
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G + L VF + + ++ V+ Q A +QGTH K SEV G G+KPWRQKGTGR
Sbjct: 13 NAGEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGR 72
Query: 170 ARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLF 229
AR G++R PQ+RGG + GP PRS+A KL KKVRRL +K LS++ E K+ + L+ F
Sbjct: 73 ARQGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKLVVLEGLT-F 131
Query: 230 LRP---SFSLSLKN--TDTHVHIV 248
P F+ LKN DT IV
Sbjct: 132 DAPKTKEFAAFLKNISVDTKALIV 155
>gi|170738702|ref|YP_001767357.1| 50S ribosomal protein L4 [Methylobacterium sp. 4-46]
gi|226730694|sp|B0UHW8.1|RL4_METS4 RecName: Full=50S ribosomal protein L4
gi|168192976|gb|ACA14923.1| ribosomal protein L4/L1e [Methylobacterium sp. 4-46]
Length = 206
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 72/113 (63%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+T + G + + +F + R D++ R VRWQLAKRQ GTH KT SE+S T KK +
Sbjct: 5 ITTLDGGEAGSVEVNEAIFGLEPRADLLQRCVRWQLAKRQAGTHKVKTRSEISRTTKKMY 64
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
+QKGTG ARHG PQFRGG GP RSHA L KKVR L L+ ALSA+A
Sbjct: 65 KQKGTGNARHGAASAPQFRGGARAFGPVVRSHAHDLPKKVRALALRHALSAKA 117
>gi|326203895|ref|ZP_08193757.1| ribosomal protein L4/L1e [Clostridium papyrosolvens DSM 2782]
gi|325985993|gb|EGD46827.1| ribosomal protein L4/L1e [Clostridium papyrosolvens DSM 2782]
Length = 207
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 94/154 (61%), Gaps = 11/154 (7%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +N E G + L +VF + +++H VV QLA ++QGT STKT SEV G
Sbjct: 1 MPKVDLYNMKGEVVGDIQLCDNVFGAEVNNEVLHAVVVNQLANKRQGTQSTKTKSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R Q+ G + GPKPRS+ + KKV+R+ +K AL+++ +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSAQWIKGGIVLGPKPRSYRYTMPKKVKRIAMKSALTSKVSG 120
Query: 218 GKVSLSVSLSLFLRPSFSLSLKNTDTHVHIVSSI 251
++ F+ + +L T + V ++S++
Sbjct: 121 NEI--------FVLDALTLEAIKTKSMVGVLSNL 146
>gi|66810850|ref|XP_639132.1| hypothetical protein DDB_G0283275 [Dictyostelium discoideum AX4]
gi|60467762|gb|EAL65778.1| hypothetical protein DDB_G0283275 [Dictyostelium discoideum AX4]
Length = 258
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 77/124 (62%), Gaps = 6/124 (4%)
Query: 101 IPVTNFFNEDK----GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSG 156
+PV NF DK + L+ DVF VP+R D++HR+VR+Q AK QQGTH + +
Sbjct: 51 VPVLNF--NDKLSPIENIQLSKDVFSVPLRVDLLHRMVRYQRAKSQQGTHQALNMGRMER 108
Query: 157 TGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
T KKP RQKG+G AR GT FRGG P RSHA L +KVR+L LK+ALS + A
Sbjct: 109 TNKKPTRQKGSGNARKGTNHSVHFRGGARTFAPTMRSHAHDLPRKVRKLCLKVALSTKLA 168
Query: 217 EGKV 220
+ K+
Sbjct: 169 QNKL 172
>gi|222099968|ref|YP_002534536.1| 50S ribosomal protein L4 [Thermotoga neapolitana DSM 4359]
gi|254803761|sp|B9K887.1|RL4_THENN RecName: Full=50S ribosomal protein L4
gi|221572358|gb|ACM23170.1| 50S ribosomal protein L4 [Thermotoga neapolitana DSM 4359]
Length = 235
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 88/145 (60%), Gaps = 4/145 (2%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + ++ VF++ D++ R V QL+ R+ GT STKT EVSG G+K
Sbjct: 4 VDLLNVKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLSNRRAGTASTKTRGEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PW QK TGRARHG++R P +R G HGPKPR + KLNKK++RL L+ ALS + E K+
Sbjct: 64 PWPQKHTGRARHGSIRSPIWRHGGVAHGPKPRDWSKKLNKKMKRLALRSALSVKYRENKL 123
Query: 221 SLSVSLSLFLRP---SFSLSLKNTD 242
+ L L RP S L+N D
Sbjct: 124 LVLEDLKLE-RPKTKSLKEILQNLD 147
>gi|407800499|ref|ZP_11147359.1| 50S ribosomal protein L4 [Oceaniovalibus guishaninsula JLT2003]
gi|407057418|gb|EKE43394.1| 50S ribosomal protein L4 [Oceaniovalibus guishaninsula JLT2003]
Length = 206
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 78/130 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V + G + L ++F + R DI+HRVVRWQ QQGTH KT SE S +
Sbjct: 1 MKLDVITLDGGNAGSVDLGDEIFGLEPRADILHRVVRWQRNNAQQGTHKVKTRSETSYST 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK +RQKGTG ARHG P FR G GP PRSH L KK R+LGL+ ALS++AA G
Sbjct: 61 KKIYRQKGTGGARHGDRNAPIFRKGGVYKGPTPRSHGHDLTKKFRKLGLRHALSSKAATG 120
Query: 219 KVSLSVSLSL 228
+ + S+ +
Sbjct: 121 NLVVLDSIDM 130
>gi|400536062|ref|ZP_10799598.1| 50S ribosomal protein L4 [Mycobacterium colombiense CECT 3035]
gi|400331105|gb|EJO88602.1| 50S ribosomal protein L4 [Mycobacterium colombiense CECT 3035]
Length = 226
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 79/122 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + +G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G
Sbjct: 8 LKIDVKTPGGKVEGSIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGG 67
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KP+RQKGTGRAR G+ R PQF GG +HGPKPR ++ + KK+ L+ ALS RA G
Sbjct: 68 RKPYRQKGTGRARQGSTRAPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNG 127
Query: 219 KV 220
++
Sbjct: 128 RI 129
>gi|159039833|ref|YP_001539086.1| 50S ribosomal protein L4 [Salinispora arenicola CNS-205]
gi|157918668|gb|ABW00096.1| ribosomal protein L4/L1e [Salinispora arenicola CNS-205]
Length = 216
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 80/127 (62%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+FD ++H+VV QLA +QGTH TKT EV+G GKKP++QKGTGRAR
Sbjct: 15 GSVELPADIFDAQANIALMHQVVVAQLAAARQGTHKTKTRGEVAGGGKKPYKQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G++R PQF GG +HGP PR ++ + KK++ L+ ALS R GK+ + + +
Sbjct: 75 QGSIRAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRGALSDRTRAGKLHVVEAFVAGEK 134
Query: 232 PSFSLSL 238
PS +L
Sbjct: 135 PSTKAAL 141
>gi|350269369|ref|YP_004880677.1| 50S ribosomal protein L4 [Oscillibacter valericigenes Sjm18-20]
gi|348594211|dbj|BAK98171.1| 50S ribosomal protein L4 [Oscillibacter valericigenes Sjm18-20]
Length = 207
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 75/120 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L+ VF + + ++H V+ LA +QGT S T +EVSG GKK
Sbjct: 4 VEVLNMSGTKVGEVTLSDAVFGIEPNEAVVHEAVKNHLANCRQGTQSALTRAEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ+ G + PKPR ++ LNKK RRL LK LSA+AA+G++
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTHGGIVFAPKPRDYSYVLNKKTRRLALKSVLSAKAADGEI 123
>gi|383775774|ref|YP_005460340.1| 50S ribosomal protein L4 [Actinoplanes missouriensis 431]
gi|381369006|dbj|BAL85824.1| putative ribosomal protein L4 [Actinoplanes missouriensis 431]
Length = 216
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 82/133 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L +VFDV ++H+VV QLA +QGT KT EV+G GKK
Sbjct: 4 VDVINAEGNKAGSVELPSNVFDVQANIPLMHQVVVAQLAAARQGTAKAKTRGEVAGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P++QKGTGRAR G++R PQF GG +HGP PR ++ + KK++ L+ ALS RA +G+V
Sbjct: 64 PYKQKGTGRARQGSIRAPQFTGGGVVHGPVPRDYSQRTPKKMKAAALRSALSDRARDGRV 123
Query: 221 SLSVSLSLFLRPS 233
+ S +PS
Sbjct: 124 FVVESFVTGEKPS 136
>gi|260664854|ref|ZP_05865705.1| ribosomal protein L4/L1 [Lactobacillus jensenii SJ-7A-US]
gi|297205088|ref|ZP_06922484.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
JV-V16]
gi|260561337|gb|EEX27310.1| ribosomal protein L4/L1 [Lactobacillus jensenii SJ-7A-US]
gi|297149666|gb|EFH29963.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
JV-V16]
Length = 205
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 78/120 (65%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
+D G + L +VF + ++++ V Q A +QGTH+TK S V G GKKPWRQKGTG
Sbjct: 12 KDAGEVTLNDNVFGIEPNENVVFDAVIRQRAGMRQGTHATKNRSAVRGGGKKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG T+ GP PRS+A L +KVRRL +K LS + + + + LSL
Sbjct: 72 RARQGSIRAPQWRGGGTVFGPTPRSYAYSLPRKVRRLAIKSVLSQKLQDNNLIVLDQLSL 131
>gi|119961638|ref|YP_948656.1| ribosomal protein L4 [Arthrobacter aurescens TC1]
gi|403528132|ref|YP_006663019.1| 50S ribosomal protein L4 [Arthrobacter sp. Rue61a]
gi|119948497|gb|ABM07408.1| ribosomal protein L4 [Arthrobacter aurescens TC1]
gi|403230559|gb|AFR29981.1| 50S ribosomal protein L4 [Arthrobacter sp. Rue61a]
Length = 205
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 79/123 (64%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGTH TKT +EVSG G+KP++QKGTGRAR G++
Sbjct: 9 LPAEIFDVQTNVPLLHQVVVAQLAAARQGTHKTKTRAEVSGAGRKPFKQKGTGRARQGSI 68
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS 235
R P GG +HGP PR ++ + KK++ L+ ALS RA G++ + L +PS
Sbjct: 69 RAPHMTGGGVVHGPTPRDYSQRTPKKMKAAALRGALSDRARNGRIHVIAELVAGTKPSAK 128
Query: 236 LSL 238
+L
Sbjct: 129 EAL 131
>gi|256618379|ref|ZP_05475225.1| 50S ribosomal protein L4 [Enterococcus faecalis ATCC 4200]
gi|256597906|gb|EEU17082.1| 50S ribosomal protein L4 [Enterococcus faecalis ATCC 4200]
Length = 207
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 88/156 (56%), Gaps = 9/156 (5%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L ++F + + +++ + Q A QGTH+ K S V G
Sbjct: 1 MPNVALFKQDGTQNGEITLNEEIFGIEPNESVVYDAIIMQRASLGQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS + AE
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSDKVAE 120
Query: 218 GKVSLSVSLSLFLRP---SFSLSLKN--TDTHVHIV 248
+ LS F P F L N DT V +V
Sbjct: 121 NNLVAVEGLS-FDAPKTKEFKQVLANLSIDTKVLVV 155
>gi|16801841|ref|NP_472109.1| 50S ribosomal protein L4 [Listeria innocua Clip11262]
gi|16804669|ref|NP_466154.1| 50S ribosomal protein L4 [Listeria monocytogenes EGD-e]
gi|46908803|ref|YP_015192.1| 50S ribosomal protein L4 [Listeria monocytogenes serotype 4b str.
F2365]
gi|217966170|ref|YP_002351848.1| 50S ribosomal protein L4 [Listeria monocytogenes HCC23]
gi|226225176|ref|YP_002759283.1| ribosomal protein L4 [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254825008|ref|ZP_05230009.1| ribosomal protein L4 [Listeria monocytogenes FSL J1-194]
gi|254829080|ref|ZP_05233767.1| ribosomal protein L4 [Listeria monocytogenes FSL N3-165]
gi|254854163|ref|ZP_05243511.1| ribosomal protein L4 [Listeria monocytogenes FSL R2-503]
gi|254912876|ref|ZP_05262888.1| 50S ribosomal protein L4 [Listeria monocytogenes J2818]
gi|254931099|ref|ZP_05264458.1| ribosomal protein L4 [Listeria monocytogenes HPB2262]
gi|254937256|ref|ZP_05268953.1| ribosomal protein L4 [Listeria monocytogenes F6900]
gi|254991853|ref|ZP_05274043.1| 50S ribosomal protein L4 [Listeria monocytogenes FSL J2-064]
gi|255017640|ref|ZP_05289766.1| 50S ribosomal protein L4 [Listeria monocytogenes FSL F2-515]
gi|255022701|ref|ZP_05294687.1| 50S ribosomal protein L4 [Listeria monocytogenes FSL J1-208]
gi|255027145|ref|ZP_05299131.1| 50S ribosomal protein L4 [Listeria monocytogenes FSL J2-003]
gi|255029694|ref|ZP_05301645.1| 50S ribosomal protein L4 [Listeria monocytogenes LO28]
gi|255519641|ref|ZP_05386878.1| 50S ribosomal protein L4 [Listeria monocytogenes FSL J1-175]
gi|284800483|ref|YP_003412348.1| 50S ribosomal protein L4 [Listeria monocytogenes 08-5578]
gi|284993669|ref|YP_003415437.1| 50S ribosomal protein L4 [Listeria monocytogenes 08-5923]
gi|290891816|ref|ZP_06554813.1| ribosomal protein L4 [Listeria monocytogenes FSL J2-071]
gi|300763618|ref|ZP_07073616.1| hypothetical protein LMHG_10847 [Listeria monocytogenes FSL N1-017]
gi|347549932|ref|YP_004856260.1| putative 50S ribosomal protein L4 [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|386009410|ref|YP_005927688.1| rplD [Listeria monocytogenes L99]
gi|386028030|ref|YP_005948806.1| 50S ribosomal protein L4 [Listeria monocytogenes M7]
gi|386044939|ref|YP_005963744.1| 50S ribosomal protein L4/L1 [Listeria monocytogenes 10403S]
gi|386048362|ref|YP_005966694.1| 50S ribosomal protein L4/L1 [Listeria monocytogenes J0161]
gi|386051603|ref|YP_005969594.1| 50S ribosomal protein L4/L1 family [Listeria monocytogenes FSL
R2-561]
gi|386054820|ref|YP_005972378.1| 50S ribosomal protein L4/L1 [Listeria monocytogenes Finland 1998]
gi|386733316|ref|YP_006206812.1| 50S ribosomal protein L4 [Listeria monocytogenes 07PF0776]
gi|404282197|ref|YP_006683095.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC2755]
gi|404285127|ref|YP_006686024.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC2372]
gi|404288011|ref|YP_006694597.1| 50S ribosomal protein L4 [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404409011|ref|YP_006691726.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC2376]
gi|404411881|ref|YP_006697469.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC5850]
gi|404414707|ref|YP_006700294.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC7179]
gi|405750976|ref|YP_006674442.1| 50S ribosomal protein L4 [Listeria monocytogenes ATCC 19117]
gi|405753838|ref|YP_006677303.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC2378]
gi|405756751|ref|YP_006680215.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC2540]
gi|405759684|ref|YP_006688960.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC2479]
gi|406705366|ref|YP_006755720.1| ribosomal protein L4 [Listeria monocytogenes L312]
gi|417318611|ref|ZP_12105186.1| 50S ribosomal protein L4 [Listeria monocytogenes J1-220]
gi|422810667|ref|ZP_16859078.1| 50S ribosomal protein L4 [Listeria monocytogenes FSL J1-208]
gi|423101346|ref|ZP_17089050.1| 50S ribosomal protein L4 [Listeria innocua ATCC 33091]
gi|424715441|ref|YP_007016156.1| 50S ribosomal protein L4 [Listeria monocytogenes serotype 4b str.
LL195]
gi|424824381|ref|ZP_18249394.1| 50S ribosomal protein L4 [Listeria monocytogenes str. Scott A]
gi|46577145|sp|P61054.1|RL4_LISIN RecName: Full=50S ribosomal protein L4
gi|46577146|sp|P61055.1|RL4_LISMO RecName: Full=50S ribosomal protein L4
gi|67461151|sp|Q71WE7.1|RL4_LISMF RecName: Full=50S ribosomal protein L4
gi|254803741|sp|B8DB09.1|RL4_LISMH RecName: Full=50S ribosomal protein L4
gi|259491564|sp|C1KZH9.1|RL4_LISMC RecName: Full=50S ribosomal protein L4
gi|16412119|emb|CAD00709.1| ribosomal protein L4 [Listeria monocytogenes EGD-e]
gi|16415316|emb|CAC98006.1| ribosomal protein L4 [Listeria innocua Clip11262]
gi|46882076|gb|AAT05369.1| ribosomal protein L4 [Listeria monocytogenes serotype 4b str.
F2365]
gi|217335440|gb|ACK41234.1| ribosomal protein L4/L1 family [Listeria monocytogenes HCC23]
gi|225877638|emb|CAS06352.1| ribosomal protein L4 [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|258601490|gb|EEW14815.1| ribosomal protein L4 [Listeria monocytogenes FSL N3-165]
gi|258607555|gb|EEW20163.1| ribosomal protein L4 [Listeria monocytogenes FSL R2-503]
gi|258609862|gb|EEW22470.1| ribosomal protein L4 [Listeria monocytogenes F6900]
gi|284056045|gb|ADB66986.1| 50S ribosomal protein L4 [Listeria monocytogenes 08-5578]
gi|284059136|gb|ADB70075.1| 50S ribosomal protein L4 [Listeria monocytogenes 08-5923]
gi|290558410|gb|EFD91927.1| ribosomal protein L4 [Listeria monocytogenes FSL J2-071]
gi|293582646|gb|EFF94678.1| ribosomal protein L4 [Listeria monocytogenes HPB2262]
gi|293590875|gb|EFF99209.1| 50S ribosomal protein L4 [Listeria monocytogenes J2818]
gi|293594249|gb|EFG02010.1| ribosomal protein L4 [Listeria monocytogenes FSL J1-194]
gi|300515895|gb|EFK42944.1| hypothetical protein LMHG_10847 [Listeria monocytogenes FSL N1-017]
gi|307572220|emb|CAR85399.1| rplD [Listeria monocytogenes L99]
gi|328469804|gb|EGF40721.1| 50S ribosomal protein L4 [Listeria monocytogenes J1-220]
gi|332313061|gb|EGJ26156.1| 50S ribosomal protein L4 [Listeria monocytogenes str. Scott A]
gi|336024611|gb|AEH93748.1| ribosomal protein L4 [Listeria monocytogenes M7]
gi|345535353|gb|AEO04794.1| 50S ribosomal protein L4/L1 [Listeria monocytogenes J0161]
gi|345538173|gb|AEO07613.1| 50S ribosomal protein L4/L1 [Listeria monocytogenes 10403S]
gi|346425449|gb|AEO26974.1| ribosomal protein L4/L1 family [Listeria monocytogenes FSL R2-561]
gi|346647471|gb|AEO40096.1| 50S ribosomal protein L4/L1 [Listeria monocytogenes Finland 1998]
gi|346983003|emb|CBW87040.1| Putative ribosomal protein L4 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|370792132|gb|EHN60023.1| 50S ribosomal protein L4 [Listeria innocua ATCC 33091]
gi|378750872|gb|EHY61463.1| 50S ribosomal protein L4 [Listeria monocytogenes FSL J1-208]
gi|384392074|gb|AFH81144.1| 50S ribosomal protein L4 [Listeria monocytogenes 07PF0776]
gi|404220176|emb|CBY71540.1| ribosomal protein L4 [Listeria monocytogenes ATCC 19117]
gi|404223038|emb|CBY74401.1| ribosomal protein L4 [Listeria monocytogenes SLCC2378]
gi|404225951|emb|CBY77313.1| ribosomal protein L4 [Listeria monocytogenes SLCC2540]
gi|404228832|emb|CBY50237.1| ribosomal protein L4 [Listeria monocytogenes SLCC2755]
gi|404231707|emb|CBY53111.1| ribosomal protein L4 [Listeria monocytogenes SLCC5850]
gi|404234629|emb|CBY56032.1| ribosomal protein L4 [Listeria monocytogenes SLCC2372]
gi|404237566|emb|CBY58968.1| ribosomal protein L4 [Listeria monocytogenes SLCC2479]
gi|404240406|emb|CBY61807.1| ribosomal protein L4 [Listeria monocytogenes SLCC7179]
gi|404243160|emb|CBY64560.1| ribosomal protein L4 [Listeria monocytogenes SLCC2376]
gi|404246940|emb|CBY05165.1| ribosomal protein L4 [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406362396|emb|CBY68669.1| ribosomal protein L4 [Listeria monocytogenes L312]
gi|424014625|emb|CCO65165.1| 50S ribosomal protein L4 [Listeria monocytogenes serotype 4b str.
LL195]
gi|441472424|emb|CCQ22179.1| 50S ribosomal protein L4 [Listeria monocytogenes]
gi|441475567|emb|CCQ25321.1| 50S ribosomal protein L4 [Listeria monocytogenes N53-1]
Length = 207
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G + L VF + + ++ V+ Q A +QGTH K SEV G G+KPWRQKGTGR
Sbjct: 13 NAGEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGR 72
Query: 170 ARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLF 229
AR G++R PQ+RGG + GP PRS+A KL KKVRRL +K LS++ E K+ + L+ F
Sbjct: 73 ARQGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKLVVLEGLT-F 131
Query: 230 LRP---SFSLSLKN--TDTHVHIV 248
P F+ LKN DT IV
Sbjct: 132 DAPKTKEFAAFLKNISVDTKALIV 155
>gi|373859631|ref|ZP_09602357.1| ribosomal protein L4/L1e [Bacillus sp. 1NLA3E]
gi|372450626|gb|EHP24111.1| ribosomal protein L4/L1e [Bacillus sp. 1NLA3E]
Length = 207
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + L VF + ++ V Q A +QGTH TK SEV+G
Sbjct: 1 MPKVALYNQSGSQVGEIELNDSVFGIAPNNHVLFEAVIMQRASLRQGTHKTKVRSEVAGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPW+QKGTGRAR G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS++ E
Sbjct: 61 GRKPWKQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYSYKLPKKVRRLAIKSALSSKLIE 120
Query: 218 GKV 220
+
Sbjct: 121 ENI 123
>gi|218282170|ref|ZP_03488469.1| hypothetical protein EUBIFOR_01051 [Eubacterium biforme DSM 3989]
gi|218216849|gb|EEC90387.1| hypothetical protein EUBIFOR_01051 [Eubacterium biforme DSM 3989]
Length = 209
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 87/151 (57%), Gaps = 8/151 (5%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N G + L VF + + ++ + Q+A R+QGT TK SEVSG G+K
Sbjct: 4 IDVINQTGAVVGSIELNDAVFGIEPHQQAMYDALVMQMASRRQGTADTKGRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G++R QFRGG T+ G PR++A ++NKKVRRL +K ALS + E
Sbjct: 64 PYRQKGTGRARQGSIRATQFRGGGTVFGATPRNYAYRINKKVRRLAVKSALSEKVQETAF 123
Query: 221 SLSVSLSLFLRPSFSLSLKNTDTHVHIVSSI 251
S + F ++ T T V I+ +I
Sbjct: 124 S--------VLDKFEIAEPKTKTFVSIIEAI 146
>gi|410454388|ref|ZP_11308327.1| 50S ribosomal protein L4 [Bacillus bataviensis LMG 21833]
gi|409932203|gb|EKN69170.1| 50S ribosomal protein L4 [Bacillus bataviensis LMG 21833]
Length = 207
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N++ G + L VF + + ++ + Q A +QGTH TK SEV G
Sbjct: 1 MPKVALLNQNGSQVGEIELNEAVFGIEPNQHVLFEAIVMQRASLRQGTHKTKIRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYSYKLPKKVRRLAIKSALSSKVLE 120
Query: 218 GKVSLSVSLSL 228
+ + SL+
Sbjct: 121 ENILVLESLAF 131
>gi|317496189|ref|ZP_07954549.1| ribosomal protein L4/L1 family protein [Gemella morbillorum M424]
gi|316913764|gb|EFV35250.1| ribosomal protein L4/L1 family protein [Gemella morbillorum M424]
Length = 207
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 82/123 (66%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNED--KGFMVLAGD-VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + F +D K V A D VF + + ++ + V Q A +QGTH TK SEVSG
Sbjct: 1 MPQLDLFKQDGTKVGAVEANDAVFGIEPNQHVLFQAVTLQRASLRQGTHKTKGRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ K+ +K+RRL L+ ALS++ A
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSFKMPRKMRRLALRSALSSKVAA 120
Query: 218 GKV 220
+V
Sbjct: 121 NEV 123
>gi|300814627|ref|ZP_07094878.1| 50S ribosomal protein L4 [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511246|gb|EFK38495.1| 50S ribosomal protein L4 [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 207
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 75/110 (68%)
Query: 119 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
++F+ + + +++ VV+ LA R+QGTHS KT SEV G G+KPWRQKGTGRAR G++R P
Sbjct: 22 NIFNCDVNEHVVYLVVKNILANRRQGTHSAKTRSEVRGGGRKPWRQKGTGRARQGSIRSP 81
Query: 179 QFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
QFRGG + KPR ++ KKVRRL LK L+++ + ++ + L L
Sbjct: 82 QFRGGGVVFAKKPRDYSYTTPKKVRRLALKSVLTSKLQDSEIIVLDKLEL 131
>gi|116873997|ref|YP_850778.1| 50S ribosomal protein L4 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123461454|sp|A0ALW7.1|RL4_LISW6 RecName: Full=50S ribosomal protein L4
gi|116742875|emb|CAK21999.1| ribosomal protein L4 [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 207
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G + L VF + + ++ V+ Q A +QGTH K SEV G G+KPWRQKGTGR
Sbjct: 13 NAGEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGR 72
Query: 170 ARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLF 229
AR G++R PQ+RGG + GP PRS+A KL KKVRRL +K LS++ E K+ + L+ F
Sbjct: 73 ARQGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKLVVLEGLT-F 131
Query: 230 LRP---SFSLSLKN--TDTHVHIV 248
P F+ LKN DT IV
Sbjct: 132 DAPKTKEFATFLKNISVDTKALIV 155
>gi|380750078|gb|AFE48780.1| 50S ribosomal protein L4 [Staphylococcus pettenkoferi]
Length = 207
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 70/106 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VF + D++ + Q A +QGTHS K SEV G G+KPWRQKGTGRAR
Sbjct: 15 GSVELNDAVFAIEPNNDVLFEAINLQRASLRQGTHSVKNRSEVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GT+R PQ+RGG + GP PRS++ K+ KK+RRL L+ ALS + E
Sbjct: 75 QGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSYKVQE 120
>gi|410459931|ref|ZP_11313620.1| 50S ribosomal protein L4 [Bacillus azotoformans LMG 9581]
gi|409928042|gb|EKN65166.1| 50S ribosomal protein L4 [Bacillus azotoformans LMG 9581]
Length = 207
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + L+ VF + +++ + Q A R+QGTH K SEVSG
Sbjct: 1 MPKVALYNQAGSQVGEIELSDAVFGIEPNNNVLFDAIIMQRATRRQGTHKVKNRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K ALS +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSFKLPKKVRRLAIKSALSTKVLG 120
Query: 218 GKVSLSVSLSL 228
V + +L++
Sbjct: 121 NDVVVLENLTI 131
>gi|410582520|ref|ZP_11319626.1| 50S ribosomal protein L4, bacterial/organelle [Thermaerobacter
subterraneus DSM 13965]
gi|410505340|gb|EKP94849.1| 50S ribosomal protein L4, bacterial/organelle [Thermaerobacter
subterraneus DSM 13965]
Length = 212
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 80/120 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L+ VF P+R+ ++H+ V LA +++GT +TKT VSG G+K
Sbjct: 4 VAVYNTQGERVGEIELSDAVFGAPVREALMHQAVVRYLANQRRGTAATKTRGMVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+R G + GP+PR + L KK RR L+ ALSA+ A+G++
Sbjct: 64 PWRQKGTGRARQGSIRAPQWRKGGIVFGPQPRDYTQDLPKKARRAALRSALSAKVADGEL 123
>gi|309777134|ref|ZP_07672097.1| ribosomal protein L4/L1 family protein [Erysipelotrichaceae
bacterium 3_1_53]
gi|308915004|gb|EFP60781.1| ribosomal protein L4/L1 family protein [Erysipelotrichaceae
bacterium 3_1_53]
Length = 209
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 78/138 (56%), Gaps = 8/138 (5%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
+ LA VF + + I V Q A +QGTH TK +EV G G+KPWRQKGTGRAR G
Sbjct: 17 ITLADTVFGIEPNQQCIFDAVIMQRASMRQGTHDTKNRTEVRGGGRKPWRQKGTGRARQG 76
Query: 174 TLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPS 233
++R Q+RGG + GP PR++ KLNKKVRRL LK ALS + E ++ +
Sbjct: 77 SIRATQWRGGGIVFGPTPRNYGYKLNKKVRRLALKSALSEKVLEN--------AMGVVDK 128
Query: 234 FSLSLKNTDTHVHIVSSI 251
F L T IV+ I
Sbjct: 129 FELEAPKTKAFNQIVADI 146
>gi|389577501|ref|ZP_10167529.1| 50S ribosomal protein L4, bacterial/organelle [Eubacterium
cellulosolvens 6]
gi|389312986|gb|EIM57919.1| 50S ribosomal protein L4, bacterial/organelle [Eubacterium
cellulosolvens 6]
Length = 206
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 75/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G M L+ VF V I+++++H+ V QLA +QGT KT SEV G G+K
Sbjct: 4 VSVYNMEGAEVGKMELSDAVFGVEIKENLVHQAVVLQLANNRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PR ++ K+N+K ++ LK L+++ E K
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPTPRDYSFKMNRKEKQAALKSVLTSKVQENK 122
>gi|226309809|ref|YP_002769703.1| 50S ribosomal protein L4 [Brevibacillus brevis NBRC 100599]
gi|254803719|sp|C0ZII1.1|RL4_BREBN RecName: Full=50S ribosomal protein L4
gi|226092757|dbj|BAH41199.1| 50S ribosomal protein L4 [Brevibacillus brevis NBRC 100599]
Length = 207
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 91/158 (57%), Gaps = 9/158 (5%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + LA VF + +++ + Q A ++QGTH K SEV G
Sbjct: 1 MPKVALYNQTGSQVGEIDLADSVFGIEPNSAVLYDAIVMQQASQRQGTHDVKNRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ++GG + GP PR + KLN+KVRRL LK ALS +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWKGGGVVFGPTPRKYGYKLNRKVRRLALKSALSTKVQN 120
Query: 218 GKVSLSVSLSLFLRP-----SFSLSLKNTDTHVHIVSS 250
++ + +L+ F P + LS D V IV+S
Sbjct: 121 NELLVLEALN-FAAPKTKEMTAVLSSLKVDRKVLIVTS 157
>gi|146278567|ref|YP_001168726.1| 50S ribosomal protein L4 [Rhodobacter sphaeroides ATCC 17025]
gi|166199854|sp|A4WVK7.1|RL4_RHOS5 RecName: Full=50S ribosomal protein L4
gi|145556808|gb|ABP71421.1| LSU ribosomal protein L4P [Rhodobacter sphaeroides ATCC 17025]
Length = 206
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 72/109 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F + R DI+HRVVRWQ AK Q GTHS S+VS + KK +RQKGTG AR
Sbjct: 14 GSIELDDAIFGLEPRADILHRVVRWQRAKAQAGTHSVLGKSDVSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
HG+ + P FR G GP PRSHA LNKK R LGLK ALS++A G +
Sbjct: 74 HGSKKAPIFRHGGVYKGPTPRSHAHDLNKKFRALGLKHALSSKATTGNL 122
>gi|418323019|ref|ZP_12934320.1| 50S ribosomal protein L4 [Staphylococcus pettenkoferi VCU012]
gi|365230673|gb|EHM71759.1| 50S ribosomal protein L4 [Staphylococcus pettenkoferi VCU012]
Length = 207
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 70/106 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VF + D++ + Q A +QGTHS K SEV G G+KPWRQKGTGRAR
Sbjct: 15 GSVELNDAVFAIEPNNDVLFEAINLQRASLRQGTHSVKNRSEVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GT+R PQ+RGG + GP PRS++ K+ KK+RRL L+ ALS + E
Sbjct: 75 QGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSYKVQE 120
>gi|164686528|ref|ZP_02210556.1| hypothetical protein CLOBAR_00095 [Clostridium bartlettii DSM
16795]
gi|164604397|gb|EDQ97862.1| 50S ribosomal protein L4 [Clostridium bartlettii DSM 16795]
Length = 207
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 83/126 (65%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V N ++ G + L+ VF V + + +++ VV+ QLA ++QGT S KT +EV G G+KPW
Sbjct: 6 VLNIQGQNVGEIELSDAVFGVEVNEHVLYEVVKNQLANKRQGTQSAKTRAEVRGGGRKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
RQKGTGRAR G++R Q+ GG PKPRS+ L KKVRRL +K AL+++ ++ +
Sbjct: 66 RQKGTGRARQGSIRAVQWIGGGVAFAPKPRSYRYTLPKKVRRLAMKSALTSKVQANEMIV 125
Query: 223 SVSLSL 228
+L++
Sbjct: 126 LDALTM 131
>gi|77462260|ref|YP_351764.1| 50S ribosomal protein L4 [Rhodobacter sphaeroides 2.4.1]
gi|126461136|ref|YP_001042250.1| 50S ribosomal protein L4 [Rhodobacter sphaeroides ATCC 17029]
gi|221638114|ref|YP_002524376.1| 50S ribosomal protein L4 [Rhodobacter sphaeroides KD131]
gi|332560141|ref|ZP_08414463.1| 50S ribosomal protein L4 [Rhodobacter sphaeroides WS8N]
gi|429207693|ref|ZP_19198949.1| LSU ribosomal protein L4p (L1e) [Rhodobacter sp. AKP1]
gi|109893632|sp|Q3J5S1.1|RL4_RHOS4 RecName: Full=50S ribosomal protein L4
gi|166199853|sp|A3PGL2.1|RL4_RHOS1 RecName: Full=50S ribosomal protein L4
gi|254803750|sp|B9KL92.1|RL4_RHOSK RecName: Full=50S ribosomal protein L4
gi|77386678|gb|ABA77863.1| LSU ribosomal protein L4P [Rhodobacter sphaeroides 2.4.1]
gi|126102800|gb|ABN75478.1| LSU ribosomal protein L4P [Rhodobacter sphaeroides ATCC 17029]
gi|221158895|gb|ACL99874.1| 50S ribosomal protein L4 [Rhodobacter sphaeroides KD131]
gi|332277853|gb|EGJ23168.1| 50S ribosomal protein L4 [Rhodobacter sphaeroides WS8N]
gi|428189086|gb|EKX57642.1| LSU ribosomal protein L4p (L1e) [Rhodobacter sp. AKP1]
Length = 206
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 76/117 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F + R DI+HRVVRWQ AK Q GTHS S+VS + KK +RQKGTG AR
Sbjct: 14 GSIELDDAIFGLEPRADILHRVVRWQRAKAQAGTHSVLGKSDVSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
HG+ + P FR G GP PRSHA LNKK R LGLK ALS++A G + + ++L
Sbjct: 74 HGSKKAPIFRHGGVYKGPTPRSHAHDLNKKFRALGLKHALSSKATTGNLIVLEDIAL 130
>gi|282882504|ref|ZP_06291125.1| ribosomal protein, L4/L1 family [Peptoniphilus lacrimalis 315-B]
gi|281297646|gb|EFA90121.1| ribosomal protein, L4/L1 family [Peptoniphilus lacrimalis 315-B]
Length = 207
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 75/110 (68%)
Query: 119 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
++F+ + + +++ VV+ LA R+QGTHS KT SEV G G+KPWRQKGTGRAR G++R P
Sbjct: 22 NIFNCDVNEHVVYLVVKNILANRRQGTHSAKTRSEVRGGGRKPWRQKGTGRARQGSIRSP 81
Query: 179 QFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
QFRGG + KPR ++ KKVRRL LK L+++ + ++ + L L
Sbjct: 82 QFRGGGVVFAKKPRDYSYTTPKKVRRLALKSVLTSKLQDSEIIVLDKLEL 131
>gi|225867666|ref|YP_002743614.1| 50S ribosomal protein L4 [Streptococcus equi subsp. zooepidemicus]
gi|259491569|sp|C0MCB1.1|RL4_STRS7 RecName: Full=50S ribosomal protein L4
gi|225700942|emb|CAW97646.1| 50S ribosomal protein L4 [Streptococcus equi subsp. zooepidemicus]
Length = 207
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 82/134 (61%), Gaps = 6/134 (4%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS---- 235
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K SLS F P +
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVESLS-FAAPKTAEFAK 141
Query: 236 -LSLKNTDTHVHIV 248
LS + DT V ++
Sbjct: 142 VLSALSIDTKVLVL 155
>gi|329770039|ref|ZP_08261434.1| 50S ribosomal protein L4 [Gemella sanguinis M325]
gi|328837350|gb|EGF86980.1| 50S ribosomal protein L4 [Gemella sanguinis M325]
Length = 207
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 82/123 (66%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNED--KGFMVLAGD-VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + F +D K V A D VF + + ++ + V Q A +QGTH TK SEVSG
Sbjct: 1 MPQLDLFKQDGTKVGAVEANDAVFGIEPNQHVLFQAVTLQRASLRQGTHKTKGRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ K+ +K+RRL L+ ALS++ A
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSFKMPRKMRRLALRSALSSKVAA 120
Query: 218 GKV 220
+V
Sbjct: 121 NEV 123
>gi|195977209|ref|YP_002122453.1| 50S ribosomal protein L4 [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|414563007|ref|YP_006041968.1| 50S ribosomal protein L4 [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
gi|226730727|sp|B4U501.1|RL4_STREM RecName: Full=50S ribosomal protein L4
gi|195973914|gb|ACG61440.1| 50S ribosomal protein L4 [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|338846072|gb|AEJ24284.1| 50S ribosomal protein L4 [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
Length = 207
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 82/134 (61%), Gaps = 6/134 (4%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS---- 235
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K SLS F P +
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVESLS-FAAPKTAEFAK 141
Query: 236 -LSLKNTDTHVHIV 248
LS + DT V ++
Sbjct: 142 VLSALSIDTKVLVL 155
>gi|372278262|ref|ZP_09514298.1| 50S ribosomal protein L4 [Oceanicola sp. S124]
Length = 205
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 71/107 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++F + R DI+HRVVRWQ K Q GTH T SEVS + KK +RQKGTG AR
Sbjct: 14 GSVDLGDEIFGLEPRADILHRVVRWQRNKAQAGTHKVLTKSEVSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
HG+ + P FR G GP PRSHA +L KK R+LGLK ALSA+ G
Sbjct: 74 HGSRKAPIFRKGGIYKGPTPRSHAHELTKKFRKLGLKHALSAKVKSG 120
>gi|289168731|ref|YP_003447000.1| 50S ribosomal protein L4 [Streptococcus mitis B6]
gi|288908298|emb|CBJ23140.1| 50S ribosomal protein L4 [Streptococcus mitis B6]
Length = 207
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLNDAIFGIEPNESVVFDVIVSQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG + GP PR++A KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRNYAYKLPQKVRRLALKSVYSEKVAENK 122
>gi|84685436|ref|ZP_01013334.1| 50S ribosomal protein L4 [Maritimibacter alkaliphilus HTCC2654]
gi|84666593|gb|EAQ13065.1| 50S ribosomal protein L4 [Rhodobacterales bacterium HTCC2654]
Length = 205
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 70/109 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F + R DI+HRVVRWQ QQGTH KT SE S + KK +RQKGTG AR
Sbjct: 14 GSVELDEALFGLEPRADILHRVVRWQRNNAQQGTHKVKTRSETSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
HG P FR G GP PRSH +L KK R+LGLK ALSA+A EG +
Sbjct: 74 HGDRNAPIFRKGGIYKGPTPRSHGHELTKKFRKLGLKHALSAKAQEGAI 122
>gi|375137896|ref|YP_004998545.1| 50S ribosomal protein L4 [Mycobacterium rhodesiae NBB3]
gi|359818517|gb|AEV71330.1| 50S ribosomal protein L4, bacterial/organelle [Mycobacterium
rhodesiae NBB3]
Length = 220
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 81/135 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + G + L +FDV ++H+VV QLA ++QGTHSTKT +V G G
Sbjct: 6 LKIDVHTPAGKKDGSVELPAALFDVEPNIALMHQVVEAQLAAKRQGTHSTKTRGDVRGGG 65
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP+RQKGTGRAR G+ R PQF GG +HGP+PR ++ + KK+ L+ ALS RA G
Sbjct: 66 KKPYRQKGTGRARQGSTRAPQFTGGGVVHGPQPRDYSQRTPKKMIAAALRGALSDRARNG 125
Query: 219 KVSLSVSLSLFLRPS 233
++ L PS
Sbjct: 126 RIHAVTELVEGQAPS 140
>gi|430755581|ref|YP_007211142.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|430020101|gb|AGA20707.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 209
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 82/133 (61%), Gaps = 3/133 (2%)
Query: 99 LVIPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVS 155
+++P +N++ G + L VF + + ++ + Q A +QGTH K SEV
Sbjct: 1 MIMPKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVR 60
Query: 156 GTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
G G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS++
Sbjct: 61 GGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSSKV 120
Query: 216 AEGKVSLSVSLSL 228
+ + + L+L
Sbjct: 121 NDNNIIVLEDLTL 133
>gi|348533363|ref|XP_003454175.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like
[Oreochromis niloticus]
Length = 302
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 106/196 (54%), Gaps = 29/196 (14%)
Query: 58 ASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPD------------ITIGLHQDLVIP--- 102
+++F++++ S+E A P +LLL ++ PD + + D +P
Sbjct: 13 VAKRFASSL----SNESALPPNLLLPTNLVDPDRLKRPPPPADSSLPLLRKCDAAVPAHL 68
Query: 103 ------VTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISE 153
V + +D G L DVF VP R DI+H V WQ ++ TK SE
Sbjct: 69 TPVQTWVESLERQDSEPLGVAQLHPDVFAVPPRLDILHSVETWQRNYKRISHAHTKVRSE 128
Query: 154 VSGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPK-PRSHAIKLNKKVRRLGLKIALS 212
VSG G+KPW+QKG+GRARHG++R P +RGG HGP+ P S+ L KVR GLK+ALS
Sbjct: 129 VSGGGRKPWKQKGSGRARHGSIRSPIWRGGGVSHGPRGPTSYYYMLPMKVRVQGLKVALS 188
Query: 213 ARAAEGKVSLSVSLSL 228
++ A+ + + SL++
Sbjct: 189 SKKAQDDLHIVDSLNI 204
>gi|358065650|ref|ZP_09152186.1| 50S ribosomal protein L4 [Clostridium hathewayi WAL-18680]
gi|356696136|gb|EHI57759.1| 50S ribosomal protein L4 [Clostridium hathewayi WAL-18680]
Length = 206
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 75/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V I + ++H V QLA ++QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGTLELNDAVFGVEINEHLVHLSVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PW+QKGTG AR G+ R PQ+ GG + P PR + I+LNKK +R LK AL++R + K
Sbjct: 64 PWKQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYTIRLNKKEKRAALKSALTSRVNDNK 122
>gi|222150446|ref|YP_002559599.1| 50S ribosomal protein L4 [Macrococcus caseolyticus JCSC5402]
gi|254803742|sp|B9E9J2.1|RL4_MACCJ RecName: Full=50S ribosomal protein L4
gi|222119568|dbj|BAH16903.1| 50S ribosomal protein L4 [Macrococcus caseolyticus JCSC5402]
Length = 207
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 77/117 (65%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +VF + + ++ + Q A +QGTH+ K S VSG G+KPW+QKGTGRAR
Sbjct: 15 GSIELNDNVFGIEPNQHVLFEAINLQRASMRQGTHAVKNRSAVSGGGRKPWKQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
GT+R PQ+RGG + GP PRS++ K+ KK+RRL L+ ALSA+ E ++ SL+
Sbjct: 75 QGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSAKVQENAFTVLESLTF 131
>gi|150392159|ref|YP_001322208.1| 50S ribosomal protein L4 [Alkaliphilus metalliredigens QYMF]
gi|166990944|sp|A6TWI1.1|RL4_ALKMQ RecName: Full=50S ribosomal protein L4
gi|149952021|gb|ABR50549.1| ribosomal protein L4/L1e [Alkaliphilus metalliredigens QYMF]
Length = 207
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 83/128 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + M L+ ++F V + + +++ V+ QLA ++QGT S KT +EV G G+K
Sbjct: 4 VAVYNVSGQKVSEMELSENIFGVEVNEHVLYEAVKNQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PW+QKGTGRAR GT+R P + GG T+ PKPR H+ L +KV+RL LK AL+++ ++
Sbjct: 64 PWKQKGTGRARAGTIRSPLWIGGGTVFAPKPRDHSYTLPRKVKRLALKSALTSKVNNEEL 123
Query: 221 SLSVSLSL 228
+ LSL
Sbjct: 124 LVLDELSL 131
>gi|325663061|ref|ZP_08151511.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 4_1_37FAA]
gi|331086668|ref|ZP_08335745.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470515|gb|EGC73745.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 4_1_37FAA]
gi|330409834|gb|EGG89269.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 206
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 75/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L+ VF V + + ++H V QLA ++QGT KT SEV G G+K
Sbjct: 4 VSVYNIEGKEVGTIDLSDAVFGVEVNEHLLHMAVVSQLANKRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PR ++ KLNKK +R LK AL++R E K
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPTPRDYSFKLNKKEKRAALKSALTSRVEEKK 122
>gi|417848973|ref|ZP_12494905.1| 50S ribosomal protein L4 [Streptococcus mitis SK1080]
gi|339457721|gb|EGP70288.1| 50S ribosomal protein L4 [Streptococcus mitis SK1080]
Length = 207
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 71/108 (65%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLNDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG + GP PRS+ KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSEKVAENK 122
>gi|125625142|ref|YP_001033625.1| 50S ribosomal protein L4 [Lactococcus lactis subsp. cremoris
MG1363]
gi|389855528|ref|YP_006357772.1| 50S ribosomal protein L4 [Lactococcus lactis subsp. cremoris
NZ9000]
gi|166234678|sp|A2RNQ4.1|RL4_LACLM RecName: Full=50S ribosomal protein L4
gi|124493950|emb|CAL98945.1| 50S ribosomal protein L4 (BL4) [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071950|gb|ADJ61350.1| 50S ribosomal protein L4 [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 208
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 76/119 (63%), Gaps = 3/119 (2%)
Query: 105 NFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
+ F +D G + L VF + + ++ VV Q A +QGTH+ K S VSG GKKP
Sbjct: 5 SLFKQDGSQAGEVTLNDSVFGIEPNESVVFDVVISQRASLRQGTHAHKNRSAVSGGGKKP 64
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
WRQKGTGRAR G+ R PQ+RGG T+ GP PRS+A KL +KVR+L LK S + +GK+
Sbjct: 65 WRQKGTGRARQGSTRSPQWRGGGTVFGPNPRSYAYKLPQKVRQLALKSVYSTKVTDGKL 123
>gi|365851818|ref|ZP_09392233.1| 50S ribosomal protein L4 [Lactobacillus parafarraginis F0439]
gi|363715759|gb|EHL99182.1| 50S ribosomal protein L4 [Lactobacillus parafarraginis F0439]
Length = 207
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 73/117 (62%), Gaps = 3/117 (2%)
Query: 106 FFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
F +D G + L +F + +++ V Q A R+QGTHS K S V G GKKPW
Sbjct: 6 LFKQDGSQNGTVSLNDSIFGIEPNNNVVFDAVVMQRASRRQGTHSVKNRSAVRGGGKKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
RQKGTGRAR G++R PQ+RGG + GP PRS+A L KKV RL LK LS + ++GK
Sbjct: 66 RQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYAYHLPKKVSRLALKSVLSEKVSDGK 122
>gi|363893533|ref|ZP_09320631.1| 50S ribosomal protein L4/L1 [Eubacteriaceae bacterium ACC19a]
gi|361963837|gb|EHL16903.1| 50S ribosomal protein L4/L1 [Eubacteriaceae bacterium ACC19a]
Length = 208
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 83/129 (64%), Gaps = 2/129 (1%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
M ++ ++F V I + ++ V+ LA R+QGT S KT +EV G GKKPWRQKGTGRAR G
Sbjct: 17 MEISEEIFAVEINEHCVYETVKNHLANRRQGTQSAKTRAEVRGGGKKPWRQKGTGRARQG 76
Query: 174 TLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPS 233
+ R PQ+ GG + PKPR ++ K+NKKV+R+ LK L+ + K+ + L++ +
Sbjct: 77 STRSPQWIGGGVVFAPKPRDYSYKINKKVKRIALKSVLTDKVNNQKLIVLNELTMNEPKT 136
Query: 234 --FSLSLKN 240
F+ ++KN
Sbjct: 137 KVFAQTMKN 145
>gi|345021330|ref|ZP_08784943.1| 50S ribosomal protein L4 [Ornithinibacillus scapharcae TW25]
Length = 207
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 74/120 (61%), Gaps = 3/120 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G L VF + ++H V Q A +QGTH+ K SEV G
Sbjct: 1 MPKVALFKQDGSQAGEFELNESVFGIEPNTHVLHEAVVMQRASMRQGTHAVKNRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+ GG + GP PRS++ KL KKVRRL LK ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWVGGGVVFGPTPRSYSYKLPKKVRRLALKSALSSKVNE 120
>gi|269925832|ref|YP_003322455.1| 50S ribosomal protein L4 [Thermobaculum terrenum ATCC BAA-798]
gi|269789492|gb|ACZ41633.1| ribosomal protein L4/L1e [Thermobaculum terrenum ATCC BAA-798]
Length = 223
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 84/129 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ +PV N + + ++ VF + ++H+ + QLA + GTH T+T +EVSG G
Sbjct: 1 MQLPVYNLNGDIVSQLEVSDLVFGIQPNLAVMHQALVRQLANARTGTHDTRTRAEVSGGG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KPWRQKGTGRAR G++R PQ+RGG + GP PRS+ ++ +K+RRL L+ ALS + AE
Sbjct: 61 RKPWRQKGTGRARQGSIRAPQWRGGGVVFGPHPRSYEQRMPRKMRRLALRSALSQKVAEE 120
Query: 219 KVSLSVSLS 227
++ + LS
Sbjct: 121 RLLVVTGLS 129
>gi|317125871|ref|YP_004099983.1| 50S ribosomal protein L4P [Intrasporangium calvum DSM 43043]
gi|315589959|gb|ADU49256.1| LSU ribosomal protein L4P [Intrasporangium calvum DSM 43043]
Length = 212
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 70/100 (70%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L D+FDV +IH+VV QLA +QGTHSTKT EV G G+KP+RQKGTGRAR G+
Sbjct: 11 LPADIFDVQTNIPLIHQVVVAQLAAARQGTHSTKTRGEVRGGGRKPYRQKGTGRARQGST 70
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
R PQF GG +HGP+PR ++ + KK++ L+ ALS RA
Sbjct: 71 RAPQFAGGGVVHGPQPRDYSQRTPKKMKVAALRGALSDRA 110
>gi|363891264|ref|ZP_09318443.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium CM2]
gi|402837871|ref|ZP_10886386.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium OBRC8]
gi|361965321|gb|EHL18303.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium CM2]
gi|402274302|gb|EJU23486.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium OBRC8]
Length = 208
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 83/130 (63%), Gaps = 4/130 (3%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
M ++ D+F V + + ++ V+ LA R+QGT S KT +EV G G+KPWRQKGTGRAR G
Sbjct: 17 MEISEDIFAVEVNEHCVYEAVKNHLANRRQGTQSAKTRAEVRGGGRKPWRQKGTGRARQG 76
Query: 174 TLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPS 233
+ R PQ+ GG + PKPR ++ K+NKKV+R+ LK L+ + K+ + L++ P
Sbjct: 77 STRSPQWIGGGVVFAPKPRDYSYKINKKVKRIALKSVLTDKVNNQKLIVLNELTMN-EPK 135
Query: 234 ---FSLSLKN 240
F+ ++KN
Sbjct: 136 TKVFAQTMKN 145
>gi|296392586|ref|YP_003657470.1| 50S ribosomal protein L4 [Segniliparus rotundus DSM 44985]
gi|296179733|gb|ADG96639.1| ribosomal protein L4/L1e [Segniliparus rotundus DSM 44985]
Length = 218
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 80/135 (59%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + + + G L ++FD P ++H+VV QLA +QGTH KT EVSG G
Sbjct: 3 LTVTIHAADGKSAGTFDLPAEIFDAPANISLLHQVVTAQLAAARQGTHKVKTRGEVSGGG 62
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KP++QKGTGRAR G+ R P F GG T+HGP PR ++ + KK++ L+ ALS RA G
Sbjct: 63 RKPYKQKGTGRARQGSTRAPHFTGGGTVHGPVPRDYSQRTPKKMKAAALRGALSDRARGG 122
Query: 219 KVSLSVSLSLFLRPS 233
+V + L PS
Sbjct: 123 RVHIVDELVAGQSPS 137
>gi|402299395|ref|ZP_10819006.1| 50S ribosomal protein L4 [Bacillus alcalophilus ATCC 27647]
gi|401725433|gb|EJS98718.1| 50S ribosomal protein L4 [Bacillus alcalophilus ATCC 27647]
Length = 207
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 78/122 (63%), Gaps = 5/122 (4%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN+ G + L +F + K ++H + Q A +QGTH TK SEV G
Sbjct: 1 MPKVALFNQSGSQVGDIELVESIFGLEPNKAVLHDAIVMQQASLRQGTHKTKGRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSA--RA 215
G+KPWRQKGTGRAR GT+R PQ+ GG + GP PRS++ KL KKVRRL +K ALS+ +A
Sbjct: 61 GRKPWRQKGTGRARQGTIRAPQWVGGGVVFGPTPRSYSYKLPKKVRRLAIKSALSSKVKA 120
Query: 216 AE 217
AE
Sbjct: 121 AE 122
>gi|241889133|ref|ZP_04776437.1| ribosomal protein, L4/L1 family [Gemella haemolysans ATCC 10379]
gi|241864382|gb|EER68760.1| ribosomal protein, L4/L1 family [Gemella haemolysans ATCC 10379]
Length = 207
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + F +D G + VF + + ++ + V Q A +QGTH TK SEVSG
Sbjct: 1 MPQLDLFKQDGTKVGAVEANEAVFGIEPNQHVLFQAVTLQRASLRQGTHKTKGRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ K+ +K+RRL L+ ALS++ A
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSFKMPRKMRRLALRSALSSKVAA 120
Query: 218 GKVSLSVSLSL 228
+V SLS
Sbjct: 121 NEVFALESLSF 131
>gi|238922831|ref|YP_002936344.1| ribosomal protein L4/L1e [Eubacterium rectale ATCC 33656]
gi|259491558|sp|C4ZBD5.1|RL4_EUBR3 RecName: Full=50S ribosomal protein L4
gi|238874503|gb|ACR74210.1| ribosomal protein L4/L1e [Eubacterium rectale ATCC 33656]
gi|291523733|emb|CBK89320.1| LSU ribosomal protein L4P [Eubacterium rectale DSM 17629]
gi|291528801|emb|CBK94387.1| LSU ribosomal protein L4P [Eubacterium rectale M104/1]
Length = 206
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 83/150 (55%), Gaps = 2/150 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L +F V I + ++H V QLA ++QGT KT SEV G G+K
Sbjct: 4 VAVYNMEGKEVDKIELNDSIFGVEINEHLVHMAVLQQLANKRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ+ GG + P PR ++ KLNKK +R LK AL++R E K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYSFKLNKKEKRAALKSALTSRVVENKF 123
Query: 221 SLSVSLSL--FLRPSFSLSLKNTDTHVHIV 248
+ L L F LKN + +V
Sbjct: 124 VVVDELKLDEIKTKKFVEVLKNLNVEKALV 153
>gi|406668997|ref|ZP_11076285.1| 50S ribosomal protein L4 [Facklamia ignava CCUG 37419]
gi|405584680|gb|EKB58563.1| 50S ribosomal protein L4 [Facklamia ignava CCUG 37419]
Length = 206
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +D G + L +F + + ++ V Q A +QGTH+ K S+V G
Sbjct: 1 MPKVTLYKQDGTENGQIELNDAIFGIEPNESVVFDAVIMQRASMRQGTHAVKNRSQVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+ GG + GP PRS+A KL KKVRRL ++ ALS +AAE
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWVGGGVVFGPTPRSYAYKLPKKVRRLAIRSALSMKAAE 120
Query: 218 GKVSLSVSLSL 228
++ + L+
Sbjct: 121 DQIKVIEGLAF 131
>gi|160902255|ref|YP_001567836.1| 50S ribosomal protein L4 [Petrotoga mobilis SJ95]
gi|189029512|sp|A9BHA4.1|RL4_PETMO RecName: Full=50S ribosomal protein L4
gi|160359899|gb|ABX31513.1| ribosomal protein L4/L1e [Petrotoga mobilis SJ95]
Length = 221
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 75/120 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + N NE G + + ++F++ D+++R V QL ++ GT STKT SEVSG G+K
Sbjct: 4 IDIYNIQNEKVGTLDIKDEIFNIDPNMDVLYRYVDMQLTNKRAGTASTKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PW QK TGRAR G++R P FR G GPKPR LNKK++RL LK ALS R E +
Sbjct: 64 PWPQKHTGRARAGSIRSPLFRHGGVTFGPKPREFHKDLNKKMKRLALKSALSVRYRENNL 123
>gi|312862390|ref|ZP_07722633.1| 50S ribosomal protein L4 [Streptococcus vestibularis F0396]
gi|311102033|gb|EFQ60233.1| 50S ribosomal protein L4 [Streptococcus vestibularis F0396]
Length = 207
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 83/134 (61%), Gaps = 6/134 (4%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS---- 235
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K +LS F+ P +
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVEALS-FVAPKTAEFAN 141
Query: 236 -LSLKNTDTHVHIV 248
LS + D+ V ++
Sbjct: 142 VLSALSIDSKVLVI 155
>gi|323454046|gb|EGB09917.1| hypothetical protein AURANDRAFT_14958, partial [Aureococcus
anophagefferens]
Length = 178
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 74/109 (67%)
Query: 119 DVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGP 178
DVF P+R D++H VRWQ KR+Q ++K EVSG+ +K +RQKGTG AR G+LR P
Sbjct: 1 DVFAAPLRVDVLHDCVRWQRNKRRQVHRASKRRGEVSGSTRKLYRQKGTGNARAGSLRSP 60
Query: 179 QFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLS 227
+GG HGP R +LNKK RRL L++ALSA+ EG+++++ SL
Sbjct: 61 LRKGGAKAHGPAARDFKTELNKKQRRLALRVALSAKLREGRLTVAASLD 109
>gi|260577180|ref|ZP_05845157.1| ribosomal protein L4/L1e [Rhodobacter sp. SW2]
gi|259020654|gb|EEW23973.1| ribosomal protein L4/L1e [Rhodobacter sp. SW2]
Length = 206
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 75/109 (68%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F + R DI+HRVVRWQ AK Q GTHST T +EVS + KK ++QKGTG AR
Sbjct: 14 GSITLDEALFGLEPRADILHRVVRWQRAKAQAGTHSTLTRAEVSYSTKKIYKQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
HG+ + P FR G + GP PRSHA L KK R LGL+ ALSA+A G++
Sbjct: 74 HGSKKAPIFRHGGVVKGPTPRSHAHDLPKKFRALGLRHALSAKAQAGEL 122
>gi|406657872|ref|ZP_11066012.1| ribosomal protein L4/L1 family protein [Streptococcus iniae 9117]
gi|405578087|gb|EKB52201.1| ribosomal protein L4/L1 family protein [Streptococcus iniae 9117]
Length = 207
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 71/109 (65%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K SLS
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVESLSF 131
>gi|328875550|gb|EGG23914.1| hypothetical protein DFA_06052 [Dictyostelium fasciculatum]
Length = 333
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 69/109 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VF VP+R D++HR++RWQ AK +QGTH + + +V T KKP QKG GRAR
Sbjct: 121 GEINLLNSVFKVPLRIDLLHRMIRWQRAKARQGTHYAQNMGDVERTNKKPMAQKGNGRAR 180
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
GT Q GG PKPR H+ L KKVR+ L +ALS + A+GK+
Sbjct: 181 QGTNHAIQMVGGARAFPPKPRDHSHSLQKKVRKQALCVALSTKLAQGKL 229
>gi|296119210|ref|ZP_06837780.1| ribosomal protein L4/L1 family protein [Corynebacterium
ammoniagenes DSM 20306]
gi|295967836|gb|EFG81091.1| ribosomal protein L4/L1 family protein [Corynebacterium
ammoniagenes DSM 20306]
Length = 221
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 83/136 (61%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L ++FD + ++H+VV QLA +QGTHSTKT EV G
Sbjct: 3 NLKLDVQTAEGKTNGSVELPAEIFDAEVSIALMHQVVNAQLAAARQGTHSTKTRGEVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KP+RQKGTGRAR G++R P + GG T+HGPKPR +A + KK+ + L ALS RA
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPHYTGGGTVHGPKPRDYAQRTPKKMIKAALFGALSDRARN 122
Query: 218 GKVSLSVSLSLFLRPS 233
++ + L PS
Sbjct: 123 ERIHVIEELVAGQTPS 138
>gi|139438581|ref|ZP_01772097.1| Hypothetical protein COLAER_01095 [Collinsella aerofaciens ATCC
25986]
gi|133776120|gb|EBA39940.1| 50S ribosomal protein L4 [Collinsella aerofaciens ATCC 25986]
Length = 208
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 80/118 (67%), Gaps = 1/118 (0%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
LA +V+ + ++H +V+ Q+A +QGT S K SEVSG GKKPWRQKGTGRAR G++
Sbjct: 19 LAAEVYGIEPNIHVMHHIVKCQMASWRQGTQSAKGRSEVSGGGKKPWRQKGTGRARQGSI 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPS 233
R Q+R G + PKPRS+A ++N K +L ++ ALSA+ A+G++ L V F +PS
Sbjct: 79 RAAQWRHGGVVFAPKPRSYAKRMNNKEVKLAMRSALSAKLADGELVL-VDDYGFEKPS 135
>gi|118579120|ref|YP_900370.1| 50S ribosomal protein L4 [Pelobacter propionicus DSM 2379]
gi|166199839|sp|A1ALU2.1|RL4_PELPD RecName: Full=50S ribosomal protein L4
gi|118501830|gb|ABK98312.1| LSU ribosomal protein L4P [Pelobacter propionicus DSM 2379]
Length = 207
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 79/122 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + G + LA DVF+ +++ ++H +R QLA R+ GT TKT SEV+G+GKK
Sbjct: 4 IAVYNMNRQQVGELQLADDVFNADVKEHLMHLALRIQLANRRAGTVKTKTRSEVAGSGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P++QKGTG AR G +R PQ+ GG GP+P+ + + +NKK R+ + ALS + ++
Sbjct: 64 PFKQKGTGNARQGCVRAPQYPGGGVAFGPQPKEYHLSMNKKARKSAICSALSLQCKNNRI 123
Query: 221 SL 222
++
Sbjct: 124 TV 125
>gi|284049256|ref|YP_003399595.1| 50S ribosomal protein L4 [Acidaminococcus fermentans DSM 20731]
gi|283953477|gb|ADB48280.1| ribosomal protein L4/L1e [Acidaminococcus fermentans DSM 20731]
Length = 209
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 74/109 (67%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VF V + ++H+ V Q A +QGTH+TKT V G G+KPW+QKGTGRAR G++R P
Sbjct: 24 VFGVEFNEAVVHQAVVMQQANERQGTHATKTRGMVRGGGRKPWKQKGTGRARAGSVRSPL 83
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
+ GG T+ GP PRSHA + +K RRL ++ ALSA+ AEG + + +L+
Sbjct: 84 WVGGGTVFGPAPRSHAKDMPRKARRLAIRCALSAKVAEGALVVVDNLTF 132
>gi|433654100|ref|YP_007297808.1| 50S ribosomal protein L4, bacterial/organelle
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433292289|gb|AGB18111.1| 50S ribosomal protein L4, bacterial/organelle
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 206
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 76/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G M L+ +VF V + ++H V LA ++QGTHSTK EV G G K
Sbjct: 4 VAVYNINGEQIGEMELSDNVFGVEVNVPVMHEAVLNYLASQRQGTHSTKRRGEVRGGGIK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTGRAR G++R PQ+ G + GPKPR ++ + KKV+RL LK ALS++ + +
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIKGGVVFGPKPRDYSYNIPKKVKRLALKSALSSKVRDNE 122
>gi|326803034|ref|YP_004320852.1| 50S ribosomal protein L4 [Aerococcus urinae ACS-120-V-Col10a]
gi|326650179|gb|AEA00362.1| 50S ribosomal protein L4 [Aerococcus urinae ACS-120-V-Col10a]
Length = 207
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 81/127 (63%), Gaps = 3/127 (2%)
Query: 105 NFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP 161
N + +D G + + D+F + + I V+ Q A R+QGTH+ K S VSG G+KP
Sbjct: 5 NLYKQDGSQNGEIEVKDDIFAIEPNETAIFDVILMQRASRRQGTHAVKNRSAVSGGGRKP 64
Query: 162 WRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVS 221
WRQKGTGRAR G++R PQ+ GG GP PRS++ KL +KVRRL L+ ALS + ++ +
Sbjct: 65 WRQKGTGRARQGSIRAPQWVGGGRAFGPTPRSYSYKLPRKVRRLALRSALSRKVSQDNLV 124
Query: 222 LSVSLSL 228
+ +LSL
Sbjct: 125 VVDALSL 131
>gi|404416724|ref|ZP_10998539.1| 50S ribosomal protein L4 [Staphylococcus arlettae CVD059]
gi|403490928|gb|EJY96458.1| 50S ribosomal protein L4 [Staphylococcus arlettae CVD059]
Length = 207
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 73/111 (65%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VF + KD++ + Q A +QGTH+ K S V G G+KPWRQKGTGRAR
Sbjct: 15 GSVELNDAVFAIEPNKDVLFEAITLQRASLRQGTHAVKNRSAVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
GT+R PQ+RGG + GP PRS+A K+ KK+RRL L+ ALS + E +++
Sbjct: 75 QGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSYKVQENALTV 125
>gi|166031658|ref|ZP_02234487.1| hypothetical protein DORFOR_01358 [Dorea formicigenerans ATCC
27755]
gi|346307825|ref|ZP_08849955.1| 50S ribosomal protein L4 [Dorea formicigenerans 4_6_53AFAA]
gi|166028635|gb|EDR47392.1| 50S ribosomal protein L4 [Dorea formicigenerans ATCC 27755]
gi|345904783|gb|EGX74527.1| 50S ribosomal protein L4 [Dorea formicigenerans 4_6_53AFAA]
Length = 206
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 78/128 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L+ VF V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVETIELSDAVFGVEVNEHLVHMAVVNQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ+ GG + P PR ++ K+NKK +R LK AL++R E K
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPVPRDYSFKMNKKEKRAALKSALTSRVEENKF 123
Query: 221 SLSVSLSL 228
+ SL+
Sbjct: 124 IVVDSLTF 131
>gi|441520675|ref|ZP_21002341.1| 50S ribosomal protein L4 [Gordonia sihwensis NBRC 108236]
gi|441459835|dbj|GAC60302.1| 50S ribosomal protein L4 [Gordonia sihwensis NBRC 108236]
Length = 219
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 83/135 (61%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V N G + L ++FD ++H+VV Q A +QGTHSTKT EVSG G
Sbjct: 9 LTLDVRNADGTTNGTVDLPAELFDQTANIALMHQVVVAQQAAARQGTHSTKTRGEVSGGG 68
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KP+RQKGTGRAR G++R PQF GG T+HGP+PR + K+NKKV+ L+ ALS RA
Sbjct: 69 AKPYRQKGTGRARQGSIRAPQFTGGGTVHGPQPRDYTQKVNKKVKAAALRGALSDRARNE 128
Query: 219 KVSLSVSLSLFLRPS 233
++ + L PS
Sbjct: 129 RIHVVTELVAGQTPS 143
>gi|420143556|ref|ZP_14651053.1| 50S ribosomal protein L4 [Lactococcus garvieae IPLA 31405]
gi|391856427|gb|EIT66967.1| 50S ribosomal protein L4 [Lactococcus garvieae IPLA 31405]
Length = 208
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Query: 106 FFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
F +D G + L VF + + ++ VV Q A +QGTH+ K S VSG GKKPW
Sbjct: 6 LFKQDGTQAGEVTLNDAVFGIEPNETVVFDVVLSQRASLRQGTHAHKNRSLVSGGGKKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
RQKGTGRAR G++R PQFRGG T+ GP PRS+A KL +KVR+L LK A S +
Sbjct: 66 RQKGTGRARQGSIRSPQFRGGGTVFGPNPRSYAYKLPQKVRQLALKSAYSQK 117
>gi|363890335|ref|ZP_09317673.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium CM5]
gi|361965779|gb|EHL18750.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium CM5]
Length = 160
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 83/129 (64%), Gaps = 2/129 (1%)
Query: 114 MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 173
M ++ D+F V I + ++ V+ LA R+QGT S KT +EV G G+KPWRQKGTGRAR G
Sbjct: 17 MEISEDIFAVEINEHCVYETVKNHLANRRQGTQSAKTRAEVRGGGRKPWRQKGTGRARQG 76
Query: 174 TLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPS 233
+ R PQ+ GG + PKPR ++ K+NKKV+R+ LK L+ + K+ + L++ +
Sbjct: 77 STRSPQWIGGGVVFAPKPRDYSYKINKKVKRIALKSVLTDKVNNQKLIVLNELTMNEPKT 136
Query: 234 --FSLSLKN 240
F+ ++KN
Sbjct: 137 KVFAQTMKN 145
>gi|335046489|ref|ZP_08539512.1| 50S ribosomal protein L4 [Oribacterium sp. oral taxon 108 str.
F0425]
gi|333760275|gb|EGL37832.1| 50S ribosomal protein L4 [Oribacterium sp. oral taxon 108 str.
F0425]
Length = 206
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 74/120 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L +F P+ + ++H V QLA ++QGT T SEVSG G+K
Sbjct: 4 VSVFNMQGKEVGKMDLNDAIFAAPVHEHLLHLAVVAQLANKRQGTQKALTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G++R PQ++GG + P PR + +NKK +R LK ALS AE K+
Sbjct: 64 PWRQKGTGHARQGSIRAPQWKGGGVVFAPTPRDYTTTMNKKEKRAALKAALSNAVAENKL 123
>gi|187934984|ref|YP_001884474.1| 50S ribosomal protein L4 [Clostridium botulinum B str. Eklund 17B]
gi|188589298|ref|YP_001919673.1| 50S ribosomal protein L4 [Clostridium botulinum E3 str. Alaska E43]
gi|251779469|ref|ZP_04822389.1| 50S ribosomal protein L4 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|226730642|sp|B2UYB1.1|RL4_CLOBA RecName: Full=50S ribosomal protein L4
gi|226730643|sp|B2TIH6.1|RL4_CLOBB RecName: Full=50S ribosomal protein L4
gi|187723137|gb|ACD24358.1| 50S ribosomal protein L4 [Clostridium botulinum B str. Eklund 17B]
gi|188499579|gb|ACD52715.1| 50S ribosomal protein L4 [Clostridium botulinum E3 str. Alaska E43]
gi|243083784|gb|EES49674.1| 50S ribosomal protein L4 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 206
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L +VF+V + K +H+VV LA ++QGT S KT +EV G
Sbjct: 1 MPTVGLFNQEGKQVGDIQLNANVFEVEVNKHALHQVVVALLANKRQGTQSAKTRTEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G KPWRQKGTGRAR G++R PQ+ G + PKPR + + + K +RR+ +K AL+++ +
Sbjct: 61 GIKPWRQKGTGRARQGSIRAPQWIKGGIVFAPKPRDYRVSIPKSMRRVAMKSALTSKVND 120
Query: 218 GKVSLSVSLSL 228
G++ + SLS
Sbjct: 121 GQMVVLESLSF 131
>gi|29374852|ref|NP_814005.1| 50S ribosomal protein L4 [Enterococcus faecalis V583]
gi|46577230|sp|Q839G3.1|RL4_ENTFA RecName: Full=50S ribosomal protein L4
gi|29342310|gb|AAO80076.1| ribosomal protein L4 [Enterococcus faecalis V583]
Length = 207
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 88/156 (56%), Gaps = 9/156 (5%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L ++F + + +++ + Q A +QGTH+ K S V G
Sbjct: 1 MPNVALFKQDGTQNGEITLNEEIFGIEPNESVVYDAIIMQRASLRQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ K KKVRRL +K LS + AE
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKFPKKVRRLAMKSVLSDKVAE 120
Query: 218 GKVSLSVSLSLFLRP---SFSLSLKN--TDTHVHIV 248
+ LS F P F L N DT V +V
Sbjct: 121 NNLVAVEGLS-FDAPKTKEFKQVLANLSIDTKVLVV 155
>gi|229829428|ref|ZP_04455497.1| hypothetical protein GCWU000342_01518 [Shuttleworthia satelles DSM
14600]
gi|229791859|gb|EEP27973.1| hypothetical protein GCWU000342_01518 [Shuttleworthia satelles DSM
14600]
Length = 206
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 81/142 (57%), Gaps = 2/142 (1%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ M LA VF V + ++H V QLA ++QGT KT SEV G G+K
Sbjct: 4 VSVFNMEGKEVEQMELADSVFGVEVNDHLVHMAVLQQLANKRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ+ GG + P PR ++ KLN+K +R L ALS+R E K+
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGVVVFAPTPRDYSFKLNRKEKRAALLSALSSRVQENKL 123
Query: 221 SLSVSLSL--FLRPSFSLSLKN 240
+ L+ F+ LKN
Sbjct: 124 IVVDQLAFDEIKTKKFAEVLKN 145
>gi|366163748|ref|ZP_09463503.1| 50S ribosomal protein L4 [Acetivibrio cellulolyticus CD2]
Length = 207
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 76/109 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + + K+++H+ V QLA ++QGT STKT SEV G G KPW+QKGTGRAR
Sbjct: 15 GDIDLSEAVFGIDVNKEVVHQAVVNQLANKRQGTQSTKTKSEVRGGGIKPWKQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
G++R Q+ G + GPKPRS+ L KKV+RL LK LS++ +E ++
Sbjct: 75 QGSIRSAQWIKGGIVLGPKPRSYRYTLPKKVKRLALKSVLSSKVSENEI 123
>gi|357637970|ref|ZP_09135843.1| 50S ribosomal protein L4 [Streptococcus urinalis 2285-97]
gi|418417667|ref|ZP_12990861.1| 50S ribosomal protein L4 [Streptococcus urinalis FB127-CNA-2]
gi|357586424|gb|EHJ55832.1| 50S ribosomal protein L4 [Streptococcus urinalis 2285-97]
gi|410871258|gb|EKS19213.1| 50S ribosomal protein L4 [Streptococcus urinalis FB127-CNA-2]
Length = 207
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 82/134 (61%), Gaps = 6/134 (4%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS---- 235
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K SLS F P +
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEEKFVAVESLS-FAAPKTAEFAK 141
Query: 236 -LSLKNTDTHVHIV 248
LS + D+ V ++
Sbjct: 142 VLSALSIDSKVLVI 155
>gi|417917014|ref|ZP_12560577.1| 50S ribosomal protein L4 [Streptococcus parasanguinis SK236]
gi|342831178|gb|EGU65500.1| 50S ribosomal protein L4 [Streptococcus parasanguinis SK236]
Length = 207
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLNDAIFGIEPNQAVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG + GP PR++A KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRNYAYKLPQKVRRLALKSVYSEKVAENK 122
>gi|325000491|ref|ZP_08121603.1| 50S ribosomal protein L4 [Pseudonocardia sp. P1]
Length = 228
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 80/128 (62%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VFDV ++H+VV QL +QG+H TKT EV G GKKP+RQKGTGRAR
Sbjct: 15 GSVELPDHVFDVTANIALMHQVVTAQLNAARQGSHDTKTRGEVRGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G++R PQF GG T+HGP PR ++ + KK++ L+ ALS RA G+V + +L
Sbjct: 75 QGSVRAPQFAGGGTVHGPTPRDYSQRTPKKMKAAALRGALSDRARAGRVHVVSALVEGDT 134
Query: 232 PSFSLSLK 239
PS + K
Sbjct: 135 PSTKAARK 142
>gi|295838405|ref|ZP_06825338.1| ribosomal protein L4/L1 family protein [Streptomyces sp. SPB74]
gi|302519660|ref|ZP_07272002.1| ribosomal protein L4/L1 [Streptomyces sp. SPB78]
gi|333026514|ref|ZP_08454578.1| putative 50S ribosomal protein L4 [Streptomyces sp. Tu6071]
gi|197695798|gb|EDY42731.1| ribosomal protein L4/L1 family protein [Streptomyces sp. SPB74]
gi|302428555|gb|EFL00371.1| ribosomal protein L4/L1 [Streptomyces sp. SPB78]
gi|332746366|gb|EGJ76807.1| putative 50S ribosomal protein L4 [Streptomyces sp. Tu6071]
Length = 216
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 79/129 (61%), Gaps = 11/129 (8%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD + +IH+VV QLA +QGTH TKT EV G GKKP+RQKGTGRAR
Sbjct: 15 GTVELPAEIFDAKVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA-----------AEGKV 220
G+ R PQF GG +HGP PR ++ + KK++ L+ ALS RA EG+V
Sbjct: 75 QGSTRAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRGALSDRARNARIHVVSGVIEGEV 134
Query: 221 SLSVSLSLF 229
S + +LF
Sbjct: 135 STKAAKTLF 143
>gi|56751875|ref|YP_172576.1| 50S ribosomal protein L4 [Synechococcus elongatus PCC 6301]
gi|81301040|ref|YP_401248.1| 50S ribosomal protein L4 [Synechococcus elongatus PCC 7942]
gi|3122743|sp|O24690.1|RL4_SYNP6 RecName: Full=50S ribosomal protein L4
gi|109893647|sp|Q31L08.1|RL4_SYNE7 RecName: Full=50S ribosomal protein L4
gi|2446891|dbj|BAA22450.1| 50S ribosomal protein L4 [Synechococcus elongatus PCC 6301]
gi|56686834|dbj|BAD80056.1| 50S ribosomal protein L4 [Synechococcus elongatus PCC 6301]
gi|81169921|gb|ABB58261.1| LSU ribosomal protein L4P [Synechococcus elongatus PCC 7942]
Length = 210
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 70/89 (78%)
Query: 129 IIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHG 188
I+HR + QLA +QGTH++KT SEV G G+KPW+QKGTGRAR G++R P +RGG + G
Sbjct: 32 IVHRALIRQLANARQGTHASKTRSEVRGGGRKPWKQKGTGRARAGSIRSPLWRGGGVIFG 91
Query: 189 PKPRSHAIKLNKKVRRLGLKIALSARAAE 217
PKPR +++K+N+K RRL L+ AL +R+A+
Sbjct: 92 PKPRDYSVKMNRKERRLALRTALISRSAD 120
>gi|306830303|ref|ZP_07463474.1| ribosomal protein L4/L1 family protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|304427550|gb|EFM30651.1| ribosomal protein L4/L1 family protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
Length = 207
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 81/134 (60%), Gaps = 6/134 (4%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS---- 235
+RGG + GP RS+ KL +KVRRL LK SA+ AE K SLS F P +
Sbjct: 83 WRGGGVVFGPTSRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVESLS-FAAPKTAEFAN 141
Query: 236 -LSLKNTDTHVHIV 248
LS N D+ V ++
Sbjct: 142 VLSALNVDSKVLVI 155
>gi|288554726|ref|YP_003426661.1| 50S ribosomal protein L4 [Bacillus pseudofirmus OF4]
gi|288545886|gb|ADC49769.1| 50S ribosomal protein L4 [Bacillus pseudofirmus OF4]
Length = 207
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN+ G + L+ +F + + ++H V Q A +QGTH TK SEV G
Sbjct: 1 MPKVAVFNQAGSQVGDIELSDSIFGIEPNQSVLHDAVVMQQASLRQGTHKTKGRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+ GG + GP PRS++ KL KKVRRL +K ALS++
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWVGGGVVFGPTPRSYSYKLPKKVRRLAIKSALSSKLKA 120
Query: 218 GKVSLSVSLSL 228
++ + +L L
Sbjct: 121 AEIVVLDNLQL 131
>gi|169350796|ref|ZP_02867734.1| hypothetical protein CLOSPI_01570 [Clostridium spiroforme DSM 1552]
gi|169292382|gb|EDS74515.1| 50S ribosomal protein L4 [Clostridium spiroforme DSM 1552]
Length = 207
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 66/95 (69%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VF + K + +V Q A +QGTH K +EVSG GKKPWRQKGTGRAR G++R PQ
Sbjct: 23 VFGIEPNKQALFDMVLLQRASLRQGTHKVKNRTEVSGGGKKPWRQKGTGRARQGSIRAPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+RGG + GP PRS+ KLN+KVRRL LK ALS +
Sbjct: 83 WRGGGVVFGPTPRSYKFKLNRKVRRLALKSALSTK 117
>gi|297571934|ref|YP_003697708.1| 50S ribosomal protein L4 [Arcanobacterium haemolyticum DSM 20595]
gi|296932281|gb|ADH93089.1| ribosomal protein L4/L1e [Arcanobacterium haemolyticum DSM 20595]
Length = 215
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 83/142 (58%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
DL + + + G L + FD+ I +IH+VV QLA +QGTH TKT EV G
Sbjct: 3 DLKVDILDTTGAKAGSATLPAESFDLEINIPLIHQVVVAQLAAARQGTHKTKTRGEVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G KP++QKGTGRAR G++R P F GG T+HGP+PR ++ + KK+ L+ ALS RA
Sbjct: 63 GVKPFKQKGTGRARQGSIRAPHFTGGGTVHGPRPRDYSQRTPKKMIAAALRQALSDRARN 122
Query: 218 GKVSLSVSLSLFLRPSFSLSLK 239
G++ + + PS +L
Sbjct: 123 GRIHVVTGIVDSATPSTKAALN 144
>gi|86135763|ref|ZP_01054342.1| 50S ribosomal protein L4 [Roseobacter sp. MED193]
gi|85826637|gb|EAQ46833.1| 50S ribosomal protein L4 [Roseobacter sp. MED193]
Length = 205
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 74/122 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + V N G + L D+F + R DI+HRVVRWQ Q GTH KT SEV +
Sbjct: 1 MKLDVMNLDGSKAGDIELNADLFGLEPRADILHRVVRWQRNNAQAGTHKVKTRSEVKYST 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK +RQKGTG ARHG P FRGG GP RSH +L KK R+LGL+ ALSA+A G
Sbjct: 61 KKIYRQKGTGGARHGARSAPIFRGGGIYKGPVVRSHGHELTKKFRKLGLRHALSAKAKAG 120
Query: 219 KV 220
++
Sbjct: 121 EL 122
>gi|357384712|ref|YP_004899436.1| 50S ribosomal protein L4 [Pelagibacterium halotolerans B2]
gi|351593349|gb|AEQ51686.1| LSU ribosomal protein L4p (L1e) [Pelagibacterium halotolerans B2]
Length = 206
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 77/124 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT + G + L VF + R D+I R+VR+QL KR GTH K +EV+ TG
Sbjct: 1 MELQVTTLEGKSAGKVTLDDAVFGLEPRADLIQRMVRYQLLKRMSGTHDVKNRAEVAQTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK RQKG G ARHG+ R FRGG GP PRSHAI+L KKVR L LK ALSA+A G
Sbjct: 61 KKFGRQKGGGGARHGSRRSNIFRGGGRAFGPTPRSHAIELPKKVRALALKHALSAKAKAG 120
Query: 219 KVSL 222
+ +
Sbjct: 121 DLVI 124
>gi|311070764|ref|YP_003975687.1| 50S ribosomal protein L4 [Bacillus atrophaeus 1942]
gi|419823171|ref|ZP_14346731.1| 50S ribosomal protein L4 [Bacillus atrophaeus C89]
gi|310871281|gb|ADP34756.1| 50S ribosomal protein L4 [Bacillus atrophaeus 1942]
gi|388472702|gb|EIM09465.1| 50S ribosomal protein L4 [Bacillus atrophaeus C89]
Length = 207
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + + ++ + Q A +QG+H K SEV G
Sbjct: 1 MPKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGSHKVKNRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K ALS++ +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSALSSKVVD 120
Query: 218 GKVSLSVSLSL 228
+ + L+L
Sbjct: 121 NNIVVLEDLTL 131
>gi|318058127|ref|ZP_07976850.1| 50S ribosomal protein L4 [Streptomyces sp. SA3_actG]
gi|318076020|ref|ZP_07983352.1| 50S ribosomal protein L4 [Streptomyces sp. SA3_actF]
Length = 216
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 79/129 (61%), Gaps = 11/129 (8%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD + +IH+VV QLA +QGTH TKT EV G GKKP+RQKGTGRAR
Sbjct: 15 GTVELPAEIFDAKVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA-----------AEGKV 220
G+ R PQF GG +HGP PR ++ + KK++ L+ ALS RA EG+V
Sbjct: 75 QGSTRAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRGALSDRARNARIHVVSGVIEGEV 134
Query: 221 SLSVSLSLF 229
S + +LF
Sbjct: 135 STKAAKTLF 143
>gi|421765781|ref|ZP_16202562.1| LSU ribosomal protein L4p (L1e) [Lactococcus garvieae DCC43]
gi|407625866|gb|EKF52554.1| LSU ribosomal protein L4p (L1e) [Lactococcus garvieae DCC43]
Length = 208
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Query: 106 FFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
F +D G + L VF + + ++ VV Q A +QGTH+ K S VSG GKKPW
Sbjct: 6 LFKQDGTQAGEVTLNDAVFGIEPNETVVFDVVLSQRASLRQGTHAHKNRSLVSGGGKKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
RQKGTGRAR G++R PQFRGG T+ GP PRS+A KL +KVR+L LK A S +
Sbjct: 66 RQKGTGRARQGSIRSPQFRGGGTVFGPNPRSYAYKLPQKVRQLALKSAYSQK 117
>gi|313889542|ref|ZP_07823187.1| 50S ribosomal protein L4 [Streptococcus pseudoporcinus SPIN 20026]
gi|416853002|ref|ZP_11910147.1| 50S ribosomal protein L4 [Streptococcus pseudoporcinus LQ 940-04]
gi|313122051|gb|EFR45145.1| 50S ribosomal protein L4 [Streptococcus pseudoporcinus SPIN 20026]
gi|356740491|gb|EHI65723.1| 50S ribosomal protein L4 [Streptococcus pseudoporcinus LQ 940-04]
Length = 207
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 81/134 (60%), Gaps = 6/134 (4%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS---- 235
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K LS F P +
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVEGLS-FAAPKTAEFAK 141
Query: 236 -LSLKNTDTHVHIV 248
LS + DT V ++
Sbjct: 142 VLSALSIDTKVLVI 155
>gi|420151467|ref|ZP_14658574.1| 50S ribosomal protein L4 [Actinomyces massiliensis F0489]
gi|394766786|gb|EJF47777.1| 50S ribosomal protein L4 [Actinomyces massiliensis F0489]
Length = 218
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 84/140 (60%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + + + G + L ++FDV ++H+VV QLA +QGTH+TKT V G G
Sbjct: 9 LSVAIVDSKGSKTGTVELPAEIFDVEPNIPLMHQVVVAQLAAIRQGTHATKTRGMVRGGG 68
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KP+RQKGTGRAR G+ R PQF GG +HGP+PR + + KK++ L+ ALS RA G
Sbjct: 69 RKPYRQKGTGRARQGSTRAPQFAGGGVVHGPQPRDYTQRTPKKMKAAALRSALSDRARNG 128
Query: 219 KVSLSVSLSLFLRPSFSLSL 238
+V + + +PS +L
Sbjct: 129 RVHVITEFLVADKPSTKQAL 148
>gi|290581288|ref|YP_003485680.1| 50S ribosomal protein L4 [Streptococcus mutans NN2025]
gi|347750440|ref|NP_722321.2| 50S ribosomal protein L4 [Streptococcus mutans UA159]
gi|387786953|ref|YP_006252049.1| 50S ribosomal protein L4 [Streptococcus mutans LJ23]
gi|397650562|ref|YP_006491089.1| 50S ribosomal protein L4 [Streptococcus mutans GS-5]
gi|449864625|ref|ZP_21778483.1| 50S ribosomal protein L4 [Streptococcus mutans U2B]
gi|449872626|ref|ZP_21781545.1| 50S ribosomal protein L4 [Streptococcus mutans 8ID3]
gi|449877819|ref|ZP_21783383.1| 50S ribosomal protein L4 [Streptococcus mutans S1B]
gi|449883418|ref|ZP_21785172.1| 50S ribosomal protein L4 [Streptococcus mutans SA38]
gi|449886460|ref|ZP_21786209.1| 50S ribosomal protein L4 [Streptococcus mutans SA41]
gi|449893135|ref|ZP_21788562.1| 50S ribosomal protein L4 [Streptococcus mutans SF12]
gi|449896327|ref|ZP_21789620.1| 50S ribosomal protein L4 [Streptococcus mutans R221]
gi|449904351|ref|ZP_21792652.1| 50S ribosomal protein L4 [Streptococcus mutans M230]
gi|449912604|ref|ZP_21795277.1| 50S ribosomal protein L4 [Streptococcus mutans OMZ175]
gi|449914296|ref|ZP_21795536.1| 50S ribosomal protein L4 [Streptococcus mutans 15JP3]
gi|449920477|ref|ZP_21798494.1| 50S ribosomal protein L4 [Streptococcus mutans 1SM1]
gi|449925022|ref|ZP_21800008.1| 50S ribosomal protein L4 [Streptococcus mutans 4SM1]
gi|449929422|ref|ZP_21801561.1| 50S ribosomal protein L4 [Streptococcus mutans 3SN1]
gi|449936056|ref|ZP_21803781.1| 50S ribosomal protein L4 [Streptococcus mutans 2ST1]
gi|449941683|ref|ZP_21805580.1| 50S ribosomal protein L4 [Streptococcus mutans 11A1]
gi|449946816|ref|ZP_21807059.1| 50S ribosomal protein L4 [Streptococcus mutans 11SSST2]
gi|449956069|ref|ZP_21809386.1| 50S ribosomal protein L4 [Streptococcus mutans 4VF1]
gi|449976601|ref|ZP_21816292.1| 50S ribosomal protein L4 [Streptococcus mutans 11VS1]
gi|449983790|ref|ZP_21818661.1| 50S ribosomal protein L4 [Streptococcus mutans NFSM2]
gi|449989110|ref|ZP_21820921.1| 50S ribosomal protein L4 [Streptococcus mutans NVAB]
gi|449994833|ref|ZP_21822760.1| 50S ribosomal protein L4 [Streptococcus mutans A9]
gi|450006220|ref|ZP_21827098.1| 50S ribosomal protein L4 [Streptococcus mutans NMT4863]
gi|450010932|ref|ZP_21828894.1| 50S ribosomal protein L4 [Streptococcus mutans A19]
gi|450023617|ref|ZP_21830732.1| 50S ribosomal protein L4 [Streptococcus mutans U138]
gi|450030856|ref|ZP_21833456.1| 50S ribosomal protein L4 [Streptococcus mutans G123]
gi|450034353|ref|ZP_21834308.1| 50S ribosomal protein L4 [Streptococcus mutans M21]
gi|450040900|ref|ZP_21837098.1| 50S ribosomal protein L4 [Streptococcus mutans T4]
gi|450047513|ref|ZP_21839476.1| 50S ribosomal protein L4 [Streptococcus mutans N34]
gi|450052821|ref|ZP_21841438.1| 50S ribosomal protein L4 [Streptococcus mutans NFSM1]
gi|450055343|ref|ZP_21841752.1| 50S ribosomal protein L4 [Streptococcus mutans NLML4]
gi|450062486|ref|ZP_21844371.1| 50S ribosomal protein L4 [Streptococcus mutans NLML5]
gi|450067389|ref|ZP_21846597.1| 50S ribosomal protein L4 [Streptococcus mutans NLML9]
gi|450072743|ref|ZP_21848746.1| 50S ribosomal protein L4 [Streptococcus mutans M2A]
gi|450077122|ref|ZP_21850222.1| 50S ribosomal protein L4 [Streptococcus mutans N3209]
gi|450081077|ref|ZP_21851482.1| 50S ribosomal protein L4 [Streptococcus mutans N66]
gi|450092610|ref|ZP_21856115.1| 50S ribosomal protein L4 [Streptococcus mutans W6]
gi|450097247|ref|ZP_21857384.1| 50S ribosomal protein L4 [Streptococcus mutans SF1]
gi|450105628|ref|ZP_21859995.1| 50S ribosomal protein L4 [Streptococcus mutans SF14]
gi|450110707|ref|ZP_21862281.1| 50S ribosomal protein L4 [Streptococcus mutans SM6]
gi|450116188|ref|ZP_21864344.1| 50S ribosomal protein L4 [Streptococcus mutans ST1]
gi|450120944|ref|ZP_21866025.1| 50S ribosomal protein L4 [Streptococcus mutans ST6]
gi|450125125|ref|ZP_21867477.1| 50S ribosomal protein L4 [Streptococcus mutans U2A]
gi|450132177|ref|ZP_21869884.1| 50S ribosomal protein L4 [Streptococcus mutans NLML8]
gi|450140059|ref|ZP_21872769.1| 50S ribosomal protein L4 [Streptococcus mutans NLML1]
gi|450149132|ref|ZP_21875970.1| 50S ribosomal protein L4 [Streptococcus mutans 14D]
gi|450155216|ref|ZP_21878137.1| 50S ribosomal protein L4 [Streptococcus mutans 21]
gi|450159637|ref|ZP_21879568.1| 50S ribosomal protein L4 [Streptococcus mutans 66-2A]
gi|450163943|ref|ZP_21881014.1| 50S ribosomal protein L4 [Streptococcus mutans B]
gi|450170052|ref|ZP_21883328.1| 50S ribosomal protein L4 [Streptococcus mutans SM4]
gi|450180180|ref|ZP_21887072.1| 50S ribosomal protein L4 [Streptococcus mutans 24]
gi|345287736|gb|AAN59627.2|AE015024_19 50S ribosomal protein L4 [Streptococcus mutans UA159]
gi|254998187|dbj|BAH88788.1| 50S ribosomal protein L4 [Streptococcus mutans NN2025]
gi|379133354|dbj|BAL70106.1| 50S ribosomal protein L4 [Streptococcus mutans LJ23]
gi|392604131|gb|AFM82295.1| 50S ribosomal protein L4 [Streptococcus mutans GS-5]
gi|449151873|gb|EMB55594.1| 50S ribosomal protein L4 [Streptococcus mutans 11A1]
gi|449153329|gb|EMB57011.1| 50S ribosomal protein L4 [Streptococcus mutans NLML8]
gi|449154428|gb|EMB58017.1| 50S ribosomal protein L4 [Streptococcus mutans 8ID3]
gi|449158289|gb|EMB61709.1| 50S ribosomal protein L4 [Streptococcus mutans 15JP3]
gi|449158761|gb|EMB62169.1| 50S ribosomal protein L4 [Streptococcus mutans 1SM1]
gi|449162098|gb|EMB65257.1| 50S ribosomal protein L4 [Streptococcus mutans 4SM1]
gi|449164550|gb|EMB67602.1| 50S ribosomal protein L4 [Streptococcus mutans 3SN1]
gi|449165912|gb|EMB68878.1| 50S ribosomal protein L4 [Streptococcus mutans 2ST1]
gi|449169366|gb|EMB72143.1| 50S ribosomal protein L4 [Streptococcus mutans 11SSST2]
gi|449170796|gb|EMB73489.1| 50S ribosomal protein L4 [Streptococcus mutans 4VF1]
gi|449175403|gb|EMB77817.1| 50S ribosomal protein L4 [Streptococcus mutans 11VS1]
gi|449181046|gb|EMB83178.1| 50S ribosomal protein L4 [Streptococcus mutans NFSM2]
gi|449182959|gb|EMB84960.1| 50S ribosomal protein L4 [Streptococcus mutans NVAB]
gi|449184993|gb|EMB86902.1| 50S ribosomal protein L4 [Streptococcus mutans A9]
gi|449187783|gb|EMB89539.1| 50S ribosomal protein L4 [Streptococcus mutans NMT4863]
gi|449189919|gb|EMB91539.1| 50S ribosomal protein L4 [Streptococcus mutans A19]
gi|449192297|gb|EMB93725.1| 50S ribosomal protein L4 [Streptococcus mutans G123]
gi|449193224|gb|EMB94615.1| 50S ribosomal protein L4 [Streptococcus mutans U138]
gi|449196456|gb|EMB97721.1| 50S ribosomal protein L4 [Streptococcus mutans M21]
gi|449197573|gb|EMB98737.1| 50S ribosomal protein L4 [Streptococcus mutans N34]
gi|449198351|gb|EMB99468.1| 50S ribosomal protein L4 [Streptococcus mutans T4]
gi|449199915|gb|EMC00966.1| 50S ribosomal protein L4 [Streptococcus mutans NFSM1]
gi|449205826|gb|EMC06556.1| 50S ribosomal protein L4 [Streptococcus mutans NLML5]
gi|449207646|gb|EMC08315.1| 50S ribosomal protein L4 [Streptococcus mutans NLML4]
gi|449208058|gb|EMC08689.1| 50S ribosomal protein L4 [Streptococcus mutans NLML9]
gi|449210815|gb|EMC11246.1| 50S ribosomal protein L4 [Streptococcus mutans M2A]
gi|449211533|gb|EMC11934.1| 50S ribosomal protein L4 [Streptococcus mutans N3209]
gi|449215554|gb|EMC15736.1| 50S ribosomal protein L4 [Streptococcus mutans N66]
gi|449218163|gb|EMC18185.1| 50S ribosomal protein L4 [Streptococcus mutans W6]
gi|449222930|gb|EMC22642.1| 50S ribosomal protein L4 [Streptococcus mutans SF1]
gi|449224260|gb|EMC23906.1| 50S ribosomal protein L4 [Streptococcus mutans SF14]
gi|449224707|gb|EMC24333.1| 50S ribosomal protein L4 [Streptococcus mutans SM6]
gi|449227211|gb|EMC26649.1| 50S ribosomal protein L4 [Streptococcus mutans ST1]
gi|449229716|gb|EMC29015.1| 50S ribosomal protein L4 [Streptococcus mutans ST6]
gi|449232247|gb|EMC31372.1| 50S ribosomal protein L4 [Streptococcus mutans NLML1]
gi|449232918|gb|EMC32009.1| 50S ribosomal protein L4 [Streptococcus mutans U2A]
gi|449234855|gb|EMC33841.1| 50S ribosomal protein L4 [Streptococcus mutans 14D]
gi|449237323|gb|EMC36180.1| 50S ribosomal protein L4 [Streptococcus mutans 21]
gi|449241045|gb|EMC39692.1| 50S ribosomal protein L4 [Streptococcus mutans 66-2A]
gi|449242400|gb|EMC40986.1| 50S ribosomal protein L4 [Streptococcus mutans B]
gi|449246344|gb|EMC44652.1| 50S ribosomal protein L4 [Streptococcus mutans SM4]
gi|449248460|gb|EMC46703.1| 50S ribosomal protein L4 [Streptococcus mutans 24]
gi|449249867|gb|EMC47961.1| 50S ribosomal protein L4 [Streptococcus mutans SA38]
gi|449250357|gb|EMC48422.1| 50S ribosomal protein L4 [Streptococcus mutans S1B]
gi|449254224|gb|EMC52144.1| 50S ribosomal protein L4 [Streptococcus mutans SA41]
gi|449256054|gb|EMC53889.1| 50S ribosomal protein L4 [Streptococcus mutans SF12]
gi|449257551|gb|EMC55197.1| 50S ribosomal protein L4 [Streptococcus mutans OMZ175]
gi|449259494|gb|EMC57020.1| 50S ribosomal protein L4 [Streptococcus mutans M230]
gi|449262510|gb|EMC59959.1| 50S ribosomal protein L4 [Streptococcus mutans R221]
gi|449264696|gb|EMC62031.1| 50S ribosomal protein L4 [Streptococcus mutans U2B]
Length = 207
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G + L +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVTLNDAIFGIEPNESVVFDVIISQRANLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK SA+ A+ K +LS
Sbjct: 72 RARQGSIRAPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEKFVAVDALS- 130
Query: 229 FLRP---SFS--LSLKNTDTHVHIV 248
F P F+ L+ N D+ V ++
Sbjct: 131 FEAPKTKEFATVLAALNVDSKVLVI 155
>gi|449982793|ref|ZP_21818430.1| 50S ribosomal protein L4 [Streptococcus mutans 5SM3]
gi|450002132|ref|ZP_21825917.1| 50S ribosomal protein L4 [Streptococcus mutans N29]
gi|449174550|gb|EMB77031.1| 50S ribosomal protein L4 [Streptococcus mutans 5SM3]
gi|449183669|gb|EMB85646.1| 50S ribosomal protein L4 [Streptococcus mutans N29]
Length = 207
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G + L +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVTLNDAIFGIEPNESVVFDVIISQRANLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK SA+ A+ K +LS
Sbjct: 72 RARQGSIRAPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEKFVAVDALS- 130
Query: 229 FLRP---SFS--LSLKNTDTHVHIV 248
F P F+ L+ N D+ V ++
Sbjct: 131 FEAPKTKEFATVLAALNVDSKVLVI 155
>gi|310659501|ref|YP_003937222.1| 50S ribosomal subunit protein L4 [[Clostridium] sticklandii]
gi|308826279|emb|CBH22317.1| 50S ribosomal subunit protein L4 [[Clostridium] sticklandii]
Length = 207
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 79/128 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + + L+ +F I + ++ V++ LA R+QGT S KT +EV G G+K
Sbjct: 4 VDVLNINGQKVEELELSESIFAAEISEYAVYEVIKNHLANRRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ R PQ+ GG + PKPR ++ +NKKVRRL LK L+ + EG +
Sbjct: 64 PWRQKGTGRARQGSTRSPQWIGGGVVFAPKPRDYSYSVNKKVRRLALKSVLTTKVNEGNL 123
Query: 221 SLSVSLSL 228
+ +L +
Sbjct: 124 IVLDALEM 131
>gi|392392082|ref|YP_006428684.1| 50S ribosomal protein L4 [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523160|gb|AFL98890.1| 50S ribosomal protein L4, bacterial/organelle [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 207
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 79/128 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L VF + ++H+ V QLA +++GTHST EV G G+K
Sbjct: 4 VQVVNMQGSSVGELELNEYVFGIEPNIHVMHQAVVGQLASQRRGTHSTLLRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R P +RGG + GPKPR + L KKVRRL L+ ALS++ E K+
Sbjct: 64 PWRQKGTGRARAGSIRSPLWRGGAVLFGPKPRKYGFSLPKKVRRLALRSALSSKVNEQKL 123
Query: 221 SLSVSLSL 228
+ LSL
Sbjct: 124 IVLEDLSL 131
>gi|95931441|ref|ZP_01314147.1| ribosomal protein L4/L1e [Desulfuromonas acetoxidans DSM 684]
gi|95132509|gb|EAT14202.1| ribosomal protein L4/L1e [Desulfuromonas acetoxidans DSM 684]
Length = 206
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 74/109 (67%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VFD +R ++H +VR+QLA R+QGT + K + V+G GKKP++QKGTG AR GT+ P
Sbjct: 23 VFDAEVRPYLVHDMVRYQLAARRQGTSACKNRAAVAGGGKKPFKQKGTGNARQGTVTAPN 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
GG GP PR++A KLN+KV++L L ALS+R E K+++ L L
Sbjct: 83 HVGGGVAFGPTPRNYAFKLNRKVKKLALCSALSSRFQEQKLTVLSELKL 131
>gi|52078610|ref|YP_077401.1| 50S ribosomal protein L4 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319649115|ref|ZP_08003323.1| 50S ribosomal protein L4 [Bacillus sp. BT1B_CT2]
gi|404487480|ref|YP_006711586.1| 50S ribosomal protein L4 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423680509|ref|ZP_17655348.1| 50S ribosomal protein L4 [Bacillus licheniformis WX-02]
gi|81667231|sp|Q65PA6.1|RL4_BACLD RecName: Full=50S ribosomal protein L4
gi|52001821|gb|AAU21763.1| ribosomal protein L4 [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52346474|gb|AAU39108.1| 50S ribosomal protein L4 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317388815|gb|EFV69634.1| 50S ribosomal protein L4 [Bacillus sp. BT1B_CT2]
gi|383441615|gb|EID49324.1| 50S ribosomal protein L4 [Bacillus licheniformis WX-02]
Length = 207
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + + ++ + Q A +QGTH K SEV G
Sbjct: 1 MPKVALYNQNGSTAGDIELNDSVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS+A KL KKVRRL +K ALS++ +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYAYKLPKKVRRLAIKSALSSKVND 120
Query: 218 GKVSLSVSLSL 228
+ + L+L
Sbjct: 121 NNLIVLEDLNL 131
>gi|374988946|ref|YP_004964441.1| 50S ribosomal protein L4 [Streptomyces bingchenggensis BCW-1]
gi|297159598|gb|ADI09310.1| 50S ribosomal protein L4 [Streptomyces bingchenggensis BCW-1]
Length = 217
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 83/140 (59%), Gaps = 11/140 (7%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD + +IH+VV QLA +QGTH TKT EV G GKK
Sbjct: 4 IDILSPAGDKAGTVELPAEIFDAQVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA----- 215
P+RQKGTGRAR G+ R PQF GG +HGP PR ++ + KK++ L+ ALS RA
Sbjct: 64 PYRQKGTGRARQGSTRAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRGALSDRARHSRI 123
Query: 216 ------AEGKVSLSVSLSLF 229
EG+VS + +LF
Sbjct: 124 HVVTGVIEGEVSTKAAKTLF 143
>gi|449971934|ref|ZP_21814596.1| 50S ribosomal protein L4 [Streptococcus mutans 2VS1]
gi|449171417|gb|EMB74080.1| 50S ribosomal protein L4 [Streptococcus mutans 2VS1]
Length = 207
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G + L +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVTLNDAIFGIEPNESVVFDVIISQRANLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK SA+ A+ K +LS
Sbjct: 72 RARQGSIRAPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEKFVAVDALS- 130
Query: 229 FLRP---SFS--LSLKNTDTHVHIV 248
F P F+ L+ N D+ V ++
Sbjct: 131 FEAPKTKEFATILAALNVDSKVLVI 155
>gi|15605617|ref|NP_212990.1| 50S ribosomal protein L4 [Aquifex aeolicus VF5]
gi|6647723|sp|O66432.1|RL4_AQUAE RecName: Full=50S ribosomal protein L4
gi|2982768|gb|AAC06394.1| ribosomal protein L04 [Aquifex aeolicus VF5]
Length = 199
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 79/122 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + + DVF+V ++K ++ VV+WQLAKR+QGTHSTKT EV+ +G+K QKGTG AR
Sbjct: 4 GDVEVRDDVFNVKVKKHVLWEVVKWQLAKRRQGTHSTKTRGEVAYSGRKILPQKGTGNAR 63
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
HG F GG HGPKPR + L K+VR+LGLK+ALS +A + ++ L +
Sbjct: 64 HGERGVNIFVGGGVAHGPKPRDYEYPLPKRVRKLGLKMALSDKARNNAIIFVDNIDLGKK 123
Query: 232 PS 233
P
Sbjct: 124 PK 125
>gi|339006542|ref|ZP_08639117.1| 50S ribosomal protein L4 [Brevibacillus laterosporus LMG 15441]
gi|338775751|gb|EGP35279.1| 50S ribosomal protein L4 [Brevibacillus laterosporus LMG 15441]
Length = 207
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 86/154 (55%), Gaps = 11/154 (7%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + LA VF + ++ + Q A ++QGTH K SEV G
Sbjct: 1 MPKVALYNQTGAQVGDIELAEAVFGIEPNNAVLFDAIVMQQASQRQGTHDVKNRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ++GG + GP PR + KLN+KVRRL LK ALS +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWKGGGVVFGPTPRKYGYKLNRKVRRLALKSALSTKVQN 120
Query: 218 GKVSLSVSLSLFLRPSFSLSLKNTDTHVHIVSSI 251
+ L + + +LS T I+SS+
Sbjct: 121 NE--------LLVLDALTLSAPKTKEFAGILSSL 146
>gi|299820956|ref|ZP_07052845.1| ribosomal protein L4/L1 family protein [Listeria grayi DSM 20601]
gi|299817977|gb|EFI85212.1| ribosomal protein L4/L1 family protein [Listeria grayi DSM 20601]
Length = 207
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 92/156 (58%), Gaps = 9/156 (5%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +D G + L VF + + ++ V+ Q A +QGTH K SEV G
Sbjct: 1 MPKLSLLKQDGTSAGEITLNDAVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS+A KL +KVRRL +K ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLPRKVRRLAIKSALSSKVKE 120
Query: 218 GKVSLSVSLSLFLRP---SFSLSLKN--TDTHVHIV 248
+ + +L+ F P F+ LKN DT +V
Sbjct: 121 ENLLVLENLA-FDAPKTKDFAAFLKNISVDTKALVV 155
>gi|450143943|ref|ZP_21873723.1| 50S ribosomal protein L4 [Streptococcus mutans 1ID3]
gi|450174745|ref|ZP_21884776.1| 50S ribosomal protein L4 [Streptococcus mutans SM1]
gi|449151422|gb|EMB55160.1| 50S ribosomal protein L4 [Streptococcus mutans 1ID3]
gi|449248201|gb|EMC46462.1| 50S ribosomal protein L4 [Streptococcus mutans SM1]
Length = 207
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G + L +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVTLNDAIFGIEPNESVVFDVIISQRANLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK SA+ A+ K +LS
Sbjct: 72 RARQGSIRAPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEKFVAVDALS- 130
Query: 229 FLRP---SFS--LSLKNTDTHVHIV 248
F P F+ L+ N D+ V ++
Sbjct: 131 FEAPKTKEFATVLAALNVDSKVLVI 155
>gi|449965904|ref|ZP_21812091.1| 50S ribosomal protein L4 [Streptococcus mutans 15VF2]
gi|449170725|gb|EMB73420.1| 50S ribosomal protein L4 [Streptococcus mutans 15VF2]
Length = 207
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G + L +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGEVTLDDAIFGIEPNESVVFDVIISQRANLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK SA+ A+ K +LS
Sbjct: 72 RARQGSIRAPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEKFVAVDALS- 130
Query: 229 FLRP---SFS--LSLKNTDTHVHIV 248
F P F+ L+ N D+ V ++
Sbjct: 131 FEAPKTKEFATVLAALNVDSKVLVI 155
>gi|429730004|ref|ZP_19264657.1| 50S ribosomal protein L4 [Corynebacterium durum F0235]
gi|429148599|gb|EKX91603.1| 50S ribosomal protein L4 [Corynebacterium durum F0235]
Length = 219
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 78/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+FD ++H+VV QLA ++QGTHSTKT EVSG G+KP+RQKGTGRAR
Sbjct: 17 GQVELPADIFDREASIALMHQVVNAQLAAKRQGTHSTKTRGEVSGGGRKPFRQKGTGRAR 76
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G++R P F GG HGPKPR ++ + KK++ L+ AL+ RA ++ + L
Sbjct: 77 QGSIRAPHFTGGGISHGPKPRDYSQRTPKKMKAAALRGALTDRARHSRIHVVEELVPGQN 136
Query: 232 PS 233
PS
Sbjct: 137 PS 138
>gi|399069900|ref|ZP_10749570.1| 50S ribosomal protein L4, bacterial/organelle [Caulobacter sp.
AP07]
gi|398044816|gb|EJL37612.1| 50S ribosomal protein L4, bacterial/organelle [Caulobacter sp.
AP07]
Length = 212
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 78/124 (62%), Gaps = 7/124 (5%)
Query: 125 IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGGT 184
IR DI+ RVV WQLAKR+ G H + +EVS TGKK ++QKGTG ARHG+ R QF GG
Sbjct: 28 IRGDILQRVVTWQLAKRRSGNHKIQVRNEVSRTGKKMYKQKGTGSARHGSRRAAQFVGGA 87
Query: 185 TMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG------KVSLSVSLSLFLRPSFS-LS 237
HGP RSHA L KK+R + L+ ALS++A G V+L+ + LR +F +
Sbjct: 88 KAHGPVVRSHAFDLPKKIRAMALRHALSSKAKAGSLIVLDNVALTDPKTAALRATFDKMG 147
Query: 238 LKNT 241
LKN
Sbjct: 148 LKNA 151
>gi|363898729|ref|ZP_09325251.1| 50S ribosomal protein L4 [Oribacterium sp. ACB1]
gi|395209095|ref|ZP_10398260.1| 50S ribosomal protein L4 [Oribacterium sp. ACB8]
gi|361960634|gb|EHL13870.1| 50S ribosomal protein L4 [Oribacterium sp. ACB1]
gi|394705696|gb|EJF13222.1| 50S ribosomal protein L4 [Oribacterium sp. ACB8]
Length = 206
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 74/120 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L +F P+ + ++H V QLA ++QGT T SEVSG G+K
Sbjct: 4 VSVFNMQGKEVGKMDLNDAIFAAPVHEHLLHLAVVAQLANKRQGTQKALTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G++R PQ++GG + P PR + +NKK +R LK ALS AE K+
Sbjct: 64 PWRQKGTGHARQGSIRAPQWKGGGVVFAPTPRDYTTTMNKKEKRAALKSALSNAVAENKL 123
>gi|304391454|ref|ZP_07373396.1| ribosomal protein, L4/L1 family [Ahrensia sp. R2A130]
gi|303295683|gb|EFL90041.1| ribosomal protein, L4/L1 family [Ahrensia sp. R2A130]
Length = 206
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 76/120 (63%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ + VT G + L+ VF + R+DII R+VR+QLAK +QGTH + S+V TG
Sbjct: 1 MELDVTKMDGSKSGKVSLSDTVFGLEPRQDIIQRMVRYQLAKARQGTHQVQGRSDVDRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
K+ +RQKGTG ARH + PQFRGG HGP+ R H+ L KK R L L+ ALSA+A G
Sbjct: 61 KRMYRQKGTGGARHHSQAAPQFRGGGKAHGPQSRDHSHDLTKKFRALALRHALSAKAQAG 120
>gi|209558628|ref|YP_002285100.1| 50S ribosomal protein L4 [Streptococcus pyogenes NZ131]
gi|226731433|sp|B5XJ37.1|RL4_STRPZ RecName: Full=50S ribosomal protein L4
gi|209539829|gb|ACI60405.1| LSU ribosomal protein L4p (L1e) [Streptococcus pyogenes NZ131]
Length = 207
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 68/100 (68%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 VFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDK 122
>gi|256831828|ref|YP_003160555.1| 50S ribosomal protein L4 [Jonesia denitrificans DSM 20603]
gi|256685359|gb|ACV08252.1| ribosomal protein L4/L1e [Jonesia denitrificans DSM 20603]
Length = 228
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 89/139 (64%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ ++L + + + G VL ++FDV + +IH+VV Q A +QGTH+TKT ++V
Sbjct: 1 MAENLTVDILDATGNKTGDAVLPAEIFDVALNVPLIHQVVVAQQAAARQGTHATKTRAQV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
SG G+KP++QKGTGRAR G+ R PQF GG +HGP+PR ++ + KK++ L+ ALS R
Sbjct: 61 SGGGRKPYKQKGTGRARQGSTRAPQFAGGGVVHGPQPRDYSQRTPKKMKAAALRSALSDR 120
Query: 215 AAEGKVSLSVSLSLFLRPS 233
A G++ + S + PS
Sbjct: 121 ARAGRIHVIDSFGVTEAPS 139
>gi|22478084|gb|AAH37064.1| Mrpl4 protein, partial [Mus musculus]
Length = 306
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 91/164 (55%), Gaps = 3/164 (1%)
Query: 66 ILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPI 125
I P S G D +L+K L + Q V + F E G L DVF
Sbjct: 46 ISEPRDSAGLL--DPVLRKCELRIPVHRRPVQAWVESLRGFEQERIGLAELHPDVFATAP 103
Query: 126 RKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGGTT 185
R DI+H+V WQ R+ +TKT +EVSG G+KPW+QKG+GRARHG++R P +RGG
Sbjct: 104 RLDIVHQVAIWQRNFRRISYANTKTRAEVSGGGRKPWQQKGSGRARHGSIRSPLWRGGGV 163
Query: 186 MHGPK-PRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
HGP+ P S+ L KVR LGLK+AL+ + + + + SL L
Sbjct: 164 AHGPRGPTSYYYMLPMKVRALGLKVALTVKLMQDDLHIVDSLEL 207
>gi|117924156|ref|YP_864773.1| 50S ribosomal protein L4P [Magnetococcus marinus MC-1]
gi|166234681|sp|A0L5X4.1|RL4_MAGSM RecName: Full=50S ribosomal protein L4
gi|117607912|gb|ABK43367.1| LSU ribosomal protein L4P [Magnetococcus marinus MC-1]
Length = 207
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 81/128 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+PV + N++ L VF IR D++ V +QLAKR+ GT + S+V G GKK
Sbjct: 4 VPVKDANNQEVRSTELNESVFGREIRADLLGMAVNYQLAKRRLGTATVLGRSDVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTG AR GT+R PQFR G + GP+ R ++ KLNKKVR+L L+ ALS +A+ ++
Sbjct: 64 PYRQKGTGNARQGTIRAPQFRTGGIVFGPQQRDYSHKLNKKVRKLALQTALSVKASSEEM 123
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 124 VVVDKLEL 131
>gi|323342790|ref|ZP_08083022.1| 50S ribosomal protein L4 [Erysipelothrix rhusiopathiae ATCC 19414]
gi|336066409|ref|YP_004561267.1| 50S ribosomal protein L4 [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|322463902|gb|EFY09096.1| 50S ribosomal protein L4 [Erysipelothrix rhusiopathiae ATCC 19414]
gi|334296355|dbj|BAK32226.1| 50S ribosomal protein L4 [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 209
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 72/109 (66%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VF + I V Q A +QGTH TK +EV G G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 VFGIEPNNQTIFEAVVMQQASLRQGTHKTKNRTEVRGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
+RGG + GP PRS+ LN+KVRRL L+ ALS + + ++S+ +L++
Sbjct: 83 WRGGGVVFGPTPRSYKYSLNRKVRRLALRSALSQKVMDSEMSVVENLTV 131
>gi|254449666|ref|ZP_05063103.1| ribosomal protein L4/L1 family [Octadecabacter arcticus 238]
gi|198264072|gb|EDY88342.1| ribosomal protein L4/L1 family [Octadecabacter arcticus 238]
Length = 205
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 74/117 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F + R DI+HRVVRWQ Q GTH KT SEV + KK +RQKGTG AR
Sbjct: 14 GSVELDEAIFGLEPRIDILHRVVRWQRNNAQAGTHKVKTRSEVKYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
HG P FRGG GP PRSH +L KK R+LGL+ ALSA+ A G++ + S+ +
Sbjct: 74 HGARSAPIFRGGGIYKGPTPRSHGHELTKKFRKLGLRHALSAKVAAGELVIVDSIDM 130
>gi|339442853|ref|YP_004708858.1| 50S ribosomal protein L4 [Clostridium sp. SY8519]
gi|338902254|dbj|BAK47756.1| ribosomal protein L4 [Clostridium sp. SY8519]
Length = 206
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 74/119 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E+ G + L VF V + ++H V QLA ++QGT KT SEV G G+K
Sbjct: 4 VSVYNMAGEEVGTLDLNDAVFGVEPNEHLVHAAVTAQLANKRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PRS+ +K+NKK +R LK LS++ A+ K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPVPRSYDLKVNKKEKRAALKSVLSSKVADSK 122
>gi|260584417|ref|ZP_05852164.1| 50S ribosomal protein L4/L1 [Granulicatella elegans ATCC 700633]
gi|260157935|gb|EEW93004.1| 50S ribosomal protein L4/L1 [Granulicatella elegans ATCC 700633]
Length = 207
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 87/142 (61%), Gaps = 6/142 (4%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L D+F + ++++ V Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEIELNSDIFGIEPNENVVFDAVIMQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G++R PQ+RGG + GP PRS++ KL +KVRRL +K LS + + K+ + +L F
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRSYSYKLPRKVRRLAIKSVLSQKVLDQKLVVVEALQ-FDA 133
Query: 232 P---SFSLSLKN--TDTHVHIV 248
P F+ L N DT V +V
Sbjct: 134 PKTKEFAQVLANLKVDTKVLVV 155
>gi|153816251|ref|ZP_01968919.1| hypothetical protein RUMTOR_02500 [Ruminococcus torques ATCC 27756]
gi|145846434|gb|EDK23352.1| 50S ribosomal protein L4 [Ruminococcus torques ATCC 27756]
Length = 206
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 73/119 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L VF V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVDTIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PR ++ K+NKK +R LK ALS+R E K
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPVPRDYSFKMNKKEKRAALKSALSSRVEENK 122
>gi|89893218|ref|YP_516705.1| 50S ribosomal protein L4 [Desulfitobacterium hafniense Y51]
gi|423073127|ref|ZP_17061870.1| 50S ribosomal protein L4 [Desulfitobacterium hafniense DP7]
gi|122483925|sp|Q250N1.1|RL4_DESHY RecName: Full=50S ribosomal protein L4
gi|89332666|dbj|BAE82261.1| 50S ribosomal protein L4 [Desulfitobacterium hafniense Y51]
gi|361855957|gb|EHL07891.1| 50S ribosomal protein L4 [Desulfitobacterium hafniense DP7]
Length = 207
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 79/128 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L VF + ++H+ V QLA +++GTHST EV G G+K
Sbjct: 4 VQVVNMQGSPVGELELDEYVFGIEPNTHVMHQAVVGQLASQRRGTHSTLLRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R P +RGG + GPKPR + L KKVRRL L+ ALS++ E K+
Sbjct: 64 PWRQKGTGRARAGSIRSPLWRGGAVLFGPKPRKYGFSLPKKVRRLALRSALSSKVNEQKL 123
Query: 221 SLSVSLSL 228
+ LSL
Sbjct: 124 IVLEDLSL 131
>gi|400289615|ref|ZP_10791643.1| 50S ribosomal protein L4 [Streptococcus ratti FA-1 = DSM 20564]
gi|399922000|gb|EJN94816.1| 50S ribosomal protein L4 [Streptococcus ratti FA-1 = DSM 20564]
Length = 207
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G + L VF + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTG
Sbjct: 12 KEAGQVTLNDAVFGIEPNESVVFDVVISQRANLRQGTHAVKNRSAVSGGGRKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK SA+ A+ K
Sbjct: 72 RARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEK 122
>gi|374308550|ref|YP_005054981.1| 50S ribosomal protein L4/L1 [Filifactor alocis ATCC 35896]
gi|291166878|gb|EFE28924.1| 50S ribosomal protein L4/L1 [Filifactor alocis ATCC 35896]
Length = 207
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 81/128 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E M L+ ++F I + ++++VV+ LA ++ GT S KT +EV G G K
Sbjct: 4 VDVLNINGEKVSEMELSENLFGAEINEHVVYQVVKNHLANKRVGTQSAKTRAEVRGGGAK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ++GG + PKPR ++ + KK+RRL LK L+ + EG +
Sbjct: 64 PWRQKGTGRARQGSIRSPQWKGGGVVFAPKPRDYSYTVPKKIRRLALKSVLTDKVNEGNL 123
Query: 221 SLSVSLSL 228
+ ++L
Sbjct: 124 VVVDDINL 131
>gi|408355487|ref|YP_006844018.1| 50S ribosomal protein L4 [Amphibacillus xylanus NBRC 15112]
gi|407726258|dbj|BAM46256.1| 50S ribosomal protein L4 [Amphibacillus xylanus NBRC 15112]
Length = 207
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + L VF + ++H V Q A ++QGTH+ K S VSG
Sbjct: 1 MPKLALYNQSGSQVGDIELNDAVFGIEPNTHVLHDAVVMQQASKRQGTHAVKNRSAVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+ GG + GP PRS+A KL KKVRRL L+ ALS + E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWVGGGVVFGPTPRSYAYKLPKKVRRLALRSALSTKVKE 120
Query: 218 GKVSLSVSLSL 228
+++ L++
Sbjct: 121 ESLTVLEGLTI 131
>gi|219666491|ref|YP_002456926.1| 50S ribosomal protein L4 [Desulfitobacterium hafniense DCB-2]
gi|254803731|sp|B8G1W7.1|RL4_DESHD RecName: Full=50S ribosomal protein L4
gi|219536751|gb|ACL18490.1| ribosomal protein L4/L1e [Desulfitobacterium hafniense DCB-2]
Length = 207
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 79/128 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L VF + ++H+ V QLA +++GTHST EV G G+K
Sbjct: 4 VQVVNMQGSPVGELELDEYVFGIEPNTHVMHQAVVGQLASQRRGTHSTLLRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R P +RGG + GPKPR + L KKVRRL L+ ALS++ E K+
Sbjct: 64 PWRQKGTGRARAGSIRSPLWRGGAVLFGPKPRKYGFSLPKKVRRLALRSALSSKVNEQKL 123
Query: 221 SLSVSLSL 228
+ LSL
Sbjct: 124 IVLEDLSL 131
>gi|15828001|ref|NP_302264.1| 50S ribosomal protein L4 [Mycobacterium leprae TN]
gi|221230478|ref|YP_002503894.1| 50S ribosomal protein L4 [Mycobacterium leprae Br4923]
gi|3122749|sp|O32982.1|RL4_MYCLE RecName: Full=50S ribosomal protein L4
gi|254803747|sp|B8ZSB8.1|RL4_MYCLB RecName: Full=50S ribosomal protein L4
gi|2344834|emb|CAB11436.1| ribosomal protein L4 [Mycobacterium leprae]
gi|13093554|emb|CAC30816.1| 50S ribosomal protein L4 [Mycobacterium leprae]
gi|219933585|emb|CAR71958.1| 50S ribosomal protein L4 [Mycobacterium leprae Br4923]
Length = 230
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 78/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV Q A +QGTHSTKT +VSG G+KP+RQKGTGRAR
Sbjct: 25 GTIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGGRKPYRQKGTGRAR 84
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G++R PQF GG +HGPK R ++ + KK+ L+ ALS RA G++ L +
Sbjct: 85 QGSMRAPQFTGGGIVHGPKLRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVVGKT 144
Query: 232 PS 233
PS
Sbjct: 145 PS 146
>gi|332523755|ref|ZP_08400007.1| 50S ribosomal protein L4 [Streptococcus porcinus str. Jelinkova
176]
gi|332315019|gb|EGJ28004.1| 50S ribosomal protein L4 [Streptococcus porcinus str. Jelinkova
176]
Length = 207
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 81/134 (60%), Gaps = 6/134 (4%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS---- 235
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K LS F P +
Sbjct: 83 WRGGGIVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVEGLS-FAAPKTAEFAK 141
Query: 236 -LSLKNTDTHVHIV 248
LS + DT V ++
Sbjct: 142 VLSALSIDTKVLVI 155
>gi|317501775|ref|ZP_07959961.1| ribosomal protein L4/L1 family protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088704|ref|ZP_08337614.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336439587|ref|ZP_08619198.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 1_1_57FAA]
gi|316896808|gb|EFV18893.1| ribosomal protein L4/L1 family protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|330407227|gb|EGG86730.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336015816|gb|EGN45618.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 1_1_57FAA]
Length = 206
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 73/119 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L VF V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVDTIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PR ++ K+NKK +R LK ALS+R E K
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPVPRDYSFKMNKKEKRAALKSALSSRVEENK 122
>gi|354612833|ref|ZP_09030773.1| ribosomal protein L4/L1e [Saccharomonospora paurometabolica YIM
90007]
gi|353222797|gb|EHB87094.1| ribosomal protein L4/L1e [Saccharomonospora paurometabolica YIM
90007]
Length = 226
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 81/133 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V E G + L ++FDV ++H+VV QLA +QGTH TKT +V G G+K
Sbjct: 5 VEVKTPAGEAGGTVELPAEIFDVQANIPLMHQVVVAQLAAARQGTHETKTRGDVRGGGRK 64
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G++R PQF GG T+HGP R + + KK++ L+ ALS RA G++
Sbjct: 65 PYRQKGTGRARQGSVRAPQFVGGGTVHGPTTRDYTQRTPKKMKAAALRGALSDRARSGQL 124
Query: 221 SLSVSLSLFLRPS 233
+ L +PS
Sbjct: 125 HVVTELVSGAKPS 137
>gi|336112798|ref|YP_004567565.1| 50S ribosomal protein L4 [Bacillus coagulans 2-6]
gi|335366228|gb|AEH52179.1| ribosomal protein L4/L1e [Bacillus coagulans 2-6]
Length = 207
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + + ++ + Q A +QGTH K SEV G
Sbjct: 1 MPKVALYNQNGSQVGEVELNDAVFGIEPNEHVLFEAIIMQRASLRQGTHKVKGRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVKE 120
Query: 218 GKVSLSVSLSL 228
+ + +LS
Sbjct: 121 NNILVLDALSF 131
>gi|22536244|ref|NP_687095.1| 50S ribosomal protein L4 [Streptococcus agalactiae 2603V/R]
gi|25010134|ref|NP_734529.1| 50S ribosomal protein L4 [Streptococcus agalactiae NEM316]
gi|76787912|ref|YP_328785.1| 50S ribosomal protein L4 [Streptococcus agalactiae A909]
gi|76798215|ref|ZP_00780465.1| ribosomal protein L4/L1 family [Streptococcus agalactiae 18RS21]
gi|77406989|ref|ZP_00784004.1| ribosomal protein L4/L1 family [Streptococcus agalactiae H36B]
gi|77412287|ref|ZP_00788603.1| ribosomal protein L4/L1 family [Streptococcus agalactiae CJB111]
gi|77414565|ref|ZP_00790708.1| ribosomal protein L4/L1 family [Streptococcus agalactiae 515]
gi|339302558|ref|ZP_08651604.1| 50S ribosomal protein L4 [Streptococcus agalactiae ATCC 13813]
gi|406708581|ref|YP_006763307.1| 50S ribosomal protein L4 [Streptococcus agalactiae GD201008-001]
gi|417004079|ref|ZP_11942855.1| 50S ribosomal protein L4 [Streptococcus agalactiae FSL S3-026]
gi|421147865|ref|ZP_15607538.1| 50S ribosomal protein L4 [Streptococcus agalactiae GB00112]
gi|421532428|ref|ZP_15978790.1| 50S ribosomal protein L4 [Streptococcus agalactiae STIR-CD-17]
gi|424050357|ref|ZP_17787903.1| 50S ribosomal protein L4 [Streptococcus agalactiae ZQ0910]
gi|46577261|sp|Q8E2D0.1|RL4_STRA5 RecName: Full=50S ribosomal protein L4
gi|46577263|sp|Q8E7T7.1|RL4_STRA3 RecName: Full=50S ribosomal protein L4
gi|109893642|sp|Q3K3W8.1|RL4_STRA1 RecName: Full=50S ribosomal protein L4
gi|22533064|gb|AAM98967.1|AE014194_12 ribosomal protein L4 [Streptococcus agalactiae 2603V/R]
gi|23094485|emb|CAD45704.1| ribosomal protein L4 [Streptococcus agalactiae NEM316]
gi|76562969|gb|ABA45553.1| ribosomal protein L4 [Streptococcus agalactiae A909]
gi|76586424|gb|EAO62932.1| ribosomal protein L4/L1 family [Streptococcus agalactiae 18RS21]
gi|77159363|gb|EAO70531.1| ribosomal protein L4/L1 family [Streptococcus agalactiae 515]
gi|77161677|gb|EAO72672.1| ribosomal protein L4/L1 family [Streptococcus agalactiae CJB111]
gi|77174394|gb|EAO77248.1| ribosomal protein L4/L1 family [Streptococcus agalactiae H36B]
gi|319743994|gb|EFV96374.1| 50S ribosomal protein L4 [Streptococcus agalactiae ATCC 13813]
gi|341578365|gb|EGS28761.1| 50S ribosomal protein L4 [Streptococcus agalactiae FSL S3-026]
gi|389648131|gb|EIM69643.1| 50S ribosomal protein L4 [Streptococcus agalactiae ZQ0910]
gi|401685486|gb|EJS81493.1| 50S ribosomal protein L4 [Streptococcus agalactiae GB00112]
gi|403642343|gb|EJZ03196.1| 50S ribosomal protein L4 [Streptococcus agalactiae STIR-CD-17]
gi|406649466|gb|AFS44867.1| 50S ribosomal protein L4 [Streptococcus agalactiae GD201008-001]
Length = 207
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDK 122
>gi|407788310|ref|ZP_11135442.1| 50S ribosomal protein L4 [Celeribacter baekdonensis B30]
gi|407197591|gb|EKE67645.1| 50S ribosomal protein L4 [Celeribacter baekdonensis B30]
Length = 206
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 72/111 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F + R DI+HRVVRWQ Q GTH KT SEVS + KK +RQKGTG AR
Sbjct: 14 GTLDLDEALFGLEPRADILHRVVRWQRNNAQAGTHKVKTRSEVSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
HG+ + P FR G GP PRSH +L KK R+LGLK ALSA+A G + +
Sbjct: 74 HGSRKAPIFRKGGIYKGPTPRSHGHELTKKFRKLGLKHALSAKAGSGNLVI 124
>gi|257866530|ref|ZP_05646183.1| ribosomal protein L4 [Enterococcus casseliflavus EC30]
gi|257872955|ref|ZP_05652608.1| ribosomal protein L4 [Enterococcus casseliflavus EC10]
gi|257876134|ref|ZP_05655787.1| ribosomal protein L4 [Enterococcus casseliflavus EC20]
gi|325567375|ref|ZP_08144042.1| 50S ribosomal protein L4 [Enterococcus casseliflavus ATCC 12755]
gi|420261549|ref|ZP_14764193.1| ribosomal protein L4 [Enterococcus sp. C1]
gi|257800488|gb|EEV29516.1| ribosomal protein L4 [Enterococcus casseliflavus EC30]
gi|257807119|gb|EEV35941.1| ribosomal protein L4 [Enterococcus casseliflavus EC10]
gi|257810300|gb|EEV39120.1| ribosomal protein L4 [Enterococcus casseliflavus EC20]
gi|325158808|gb|EGC70954.1| 50S ribosomal protein L4 [Enterococcus casseliflavus ATCC 12755]
gi|394771483|gb|EJF51244.1| ribosomal protein L4 [Enterococcus sp. C1]
Length = 207
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 3/119 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L ++F + + +++ + Q A +QGTH+ K S V G
Sbjct: 1 MPNVALFKQDGSQNGEITLNEEIFGIEPNESVVYDAIIMQRASLRQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS + A
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSEKVA 119
>gi|291542036|emb|CBL15146.1| LSU ribosomal protein L4P [Ruminococcus bromii L2-63]
Length = 207
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 81/128 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V + ++ G + LA VF + ++H++V LA ++QGT S T SEVSG GKK
Sbjct: 4 LAVVDMEGKNVGTIELAESVFGIEPNAAVMHQMVVNYLAAQRQGTQSALTRSEVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ R PQ+ G + PKPR + +NKKVRRL +K A S++ E ++
Sbjct: 64 PWRQKGTGRARQGSTRAPQWTHGGVVFAPKPRDYRFSVNKKVRRLAMKSAFSSKVMENEL 123
Query: 221 SLSVSLSL 228
+ S+S+
Sbjct: 124 IVVDSISM 131
>gi|225376410|ref|ZP_03753631.1| hypothetical protein ROSEINA2194_02052 [Roseburia inulinivorans DSM
16841]
gi|225211786|gb|EEG94140.1| hypothetical protein ROSEINA2194_02052 [Roseburia inulinivorans DSM
16841]
Length = 206
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 76/128 (59%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L +F V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VAVYNMEGKEVGSLELNDAIFGVEVNEHLVHMAVLQQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ+ G + P PR ++ KLNKK +R LK AL++R E K
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTHGGVVFAPVPRDYSFKLNKKEKRAALKSALTSRVNESKF 123
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 124 VVVDELKL 131
>gi|251799641|ref|YP_003014372.1| 50S ribosomal protein L4 [Paenibacillus sp. JDR-2]
gi|247547267|gb|ACT04286.1| ribosomal protein L4/L1e [Paenibacillus sp. JDR-2]
Length = 207
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 75/120 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + LA VF + ++H V Q A + GTH TK SEV G G+K
Sbjct: 4 VTVFNVSGSEVGEIELADSVFGIEPNSHVLHSAVLLQQAAERAGTHKTKGRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PW+QKGTGRAR G++R PQ+ GG T+ GP PRS+ KL KKVRRL +K ALS++ ++
Sbjct: 64 PWKQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYGFKLPKKVRRLAIKSALSSKVIANEI 123
>gi|387785033|ref|YP_006071116.1| 50S ribosomal protein L4 [Streptococcus salivarius JIM8777]
gi|338745915|emb|CCB96281.1| 50S ribosomal protein L4 [Streptococcus salivarius JIM8777]
Length = 207
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 71/109 (65%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K +LS
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVEALSF 131
>gi|325261495|ref|ZP_08128233.1| ribosomal protein L4/L1 family protein [Clostridium sp. D5]
gi|324032949|gb|EGB94226.1| ribosomal protein L4/L1 family protein [Clostridium sp. D5]
Length = 206
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 74/119 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA +QGT KT +EVSG G+K
Sbjct: 4 VSVYNIEGKEVGTIDLNDAVFGVDVNEHLVHMAVVSQLANNRQGTQKAKTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PR ++ K+NKK +R LK AL++R E K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPVPRDYSFKMNKKEKRAALKSALTSRVEENK 122
>gi|114570344|ref|YP_757024.1| 50S ribosomal protein L4 [Maricaulis maris MCS10]
gi|122315785|sp|Q0ANQ1.1|RL4_MARMM RecName: Full=50S ribosomal protein L4
gi|114340806|gb|ABI66086.1| LSU ribosomal protein L4P [Maricaulis maris MCS10]
Length = 211
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
I V +D G + L VF + +R D++ RVV+WQLA RQQGTH T SE++ T K
Sbjct: 3 IEVKTLAAKDAGAIDLDDAVFGIEEVRSDLLQRVVKWQLAARQQGTHKTLGRSEINRTKK 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
+ RQKG G ARHG PQF GG HGP+ RSHA +L KKVR LGL+ ALSA+
Sbjct: 63 RFGRQKGGGTARHGARSAPQFVGGGKAHGPRVRSHAHELPKKVRALGLRHALSAK 117
>gi|167767802|ref|ZP_02439855.1| hypothetical protein CLOSS21_02337 [Clostridium sp. SS2/1]
gi|317497094|ref|ZP_07955421.1| ribosomal protein L4/L1 family protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|429762505|ref|ZP_19294894.1| 50S ribosomal protein L4 [Anaerostipes hadrus DSM 3319]
gi|167710541|gb|EDS21120.1| 50S ribosomal protein L4 [Clostridium sp. SS2/1]
gi|291558861|emb|CBL37661.1| LSU ribosomal protein L4P [butyrate-producing bacterium SSC/2]
gi|316895639|gb|EFV17794.1| ribosomal protein L4/L1 family protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|429181495|gb|EKY22654.1| 50S ribosomal protein L4 [Anaerostipes hadrus DSM 3319]
Length = 206
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 74/119 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L ++F V I + ++H V QLA +QGT KT SEV G G+K
Sbjct: 4 VSVLNMEGKEVEKLELNDNIFGVEINEHLVHLAVVSQLANNRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G++R PQ++GG + P PR + KLNKK RR+ LK AL++R K
Sbjct: 64 PWRQKGTGHARQGSIRAPQWKGGGVVFAPTPREYTKKLNKKERRIALKSALTSRVQADK 122
>gi|295702351|ref|YP_003595426.1| 50S ribosomal protein L4 [Bacillus megaterium DSM 319]
gi|384049268|ref|YP_005497285.1| 50S ribosomal protein L4 [Bacillus megaterium WSH-002]
gi|294800010|gb|ADF37076.1| 50S ribosomal protein L4 [Bacillus megaterium DSM 319]
gi|345446959|gb|AEN91976.1| 50S ribosomal protein L4 [Bacillus megaterium WSH-002]
Length = 207
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN E+ G + L VF + ++ + Q A ++QGT K SEV G
Sbjct: 1 MPKVALFNQNGENVGEIELQDAVFGIEPNNKVLFDAIVMQRASQRQGTSKVKNRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K ALS +A +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPVPRSYSYKLPKKVRRLAIKSALSTKAQD 120
Query: 218 GKVSLSVSLSL 228
+ + +LS
Sbjct: 121 NSIVVLEALSF 131
>gi|322374046|ref|ZP_08048580.1| ribosomal protein L4/L1 family protein [Streptococcus sp. C150]
gi|419706374|ref|ZP_14233898.1| 50S ribosomal protein L4 [Streptococcus salivarius PS4]
gi|321277012|gb|EFX54083.1| ribosomal protein L4/L1 family protein [Streptococcus sp. C150]
gi|383283886|gb|EIC81826.1| 50S ribosomal protein L4 [Streptococcus salivarius PS4]
Length = 207
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 82/134 (61%), Gaps = 6/134 (4%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS---- 235
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K +LS F P +
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVEALS-FAAPKTAEFAK 141
Query: 236 -LSLKNTDTHVHIV 248
LS + D+ V ++
Sbjct: 142 VLSALSIDSKVLVI 155
>gi|55821904|ref|YP_140346.1| 50S ribosomal protein L4 [Streptococcus thermophilus LMG 18311]
gi|55823820|ref|YP_142261.1| 50S ribosomal protein L4 [Streptococcus thermophilus CNRZ1066]
gi|116628597|ref|YP_821216.1| 50S ribosomal protein L4 [Streptococcus thermophilus LMD-9]
gi|228478067|ref|ZP_04062678.1| ribosomal protein L4/L1 family protein [Streptococcus salivarius
SK126]
gi|322515868|ref|ZP_08068810.1| 50S ribosomal protein L4 [Streptococcus vestibularis ATCC 49124]
gi|340399804|ref|YP_004728829.1| 50S ribosomal protein L4 [Streptococcus salivarius CCHSS3]
gi|386087545|ref|YP_006003419.1| 50S ribosomal protein L4 [Streptococcus thermophilus ND03]
gi|386345660|ref|YP_006041824.1| 50S ribosomal protein L4 [Streptococcus thermophilus JIM 8232]
gi|387760396|ref|YP_006067373.1| 50S ribosomal protein L4 [Streptococcus salivarius 57.I]
gi|387910636|ref|YP_006340942.1| 50S ribosomal protein L4 [Streptococcus thermophilus MN-ZLW-002]
gi|418018805|ref|ZP_12658360.1| 50S ribosomal protein L4 [Streptococcus salivarius M18]
gi|421453362|ref|ZP_15902718.1| LSU ribosomal protein L1E (L4P) [Streptococcus salivarius K12]
gi|445383355|ref|ZP_21427465.1| 50S ribosomal protein L4 [Streptococcus thermophilus MTCC 5460]
gi|445396102|ref|ZP_21429198.1| 50S ribosomal protein L4 [Streptococcus thermophilus MTCC 5461]
gi|81558868|sp|Q5LXR2.1|RL4_STRT1 RecName: Full=50S ribosomal protein L4
gi|81560055|sp|Q5M2B4.1|RL4_STRT2 RecName: Full=50S ribosomal protein L4
gi|122266809|sp|Q03IF2.1|RL4_STRTD RecName: Full=50S ribosomal protein L4
gi|55737889|gb|AAV61531.1| 50S ribosomal protein L4 [Streptococcus thermophilus LMG 18311]
gi|55739805|gb|AAV63446.1| 50S ribosomal protein L4 [Streptococcus thermophilus CNRZ1066]
gi|116101874|gb|ABJ67020.1| LSU ribosomal protein L4P [Streptococcus thermophilus LMD-9]
gi|228250247|gb|EEK09500.1| ribosomal protein L4/L1 family protein [Streptococcus salivarius
SK126]
gi|312279258|gb|ADQ63915.1| 50S ribosomal protein L4 [Streptococcus thermophilus ND03]
gi|322125655|gb|EFX96982.1| 50S ribosomal protein L4 [Streptococcus vestibularis ATCC 49124]
gi|338743797|emb|CCB94307.1| 50S ribosomal protein L4 [Streptococcus salivarius CCHSS3]
gi|339279121|emb|CCC20869.1| 50S ribosomal protein L4 [Streptococcus thermophilus JIM 8232]
gi|339291163|gb|AEJ52510.1| 50S ribosomal protein L4 [Streptococcus salivarius 57.I]
gi|345526247|gb|EGX29559.1| 50S ribosomal protein L4 [Streptococcus salivarius M18]
gi|387575571|gb|AFJ84277.1| 50S ribosomal protein L4 [Streptococcus thermophilus MN-ZLW-002]
gi|400181671|gb|EJO15938.1| LSU ribosomal protein L1E (L4P) [Streptococcus salivarius K12]
gi|444748223|gb|ELW73201.1| 50S ribosomal protein L4 [Streptococcus thermophilus MTCC 5461]
gi|444748260|gb|ELW73237.1| 50S ribosomal protein L4 [Streptococcus thermophilus MTCC 5460]
Length = 207
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 71/109 (65%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K +LS
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVEALSF 131
>gi|119508437|ref|NP_075656.2| 39S ribosomal protein L4, mitochondrial [Mus musculus]
gi|81881827|sp|Q9DCU6.1|RM04_MOUSE RecName: Full=39S ribosomal protein L4, mitochondrial; Short=L4mt;
Short=MRP-L4
gi|12832465|dbj|BAB22118.1| unnamed protein product [Mus musculus]
gi|13559359|dbj|BAB40839.1| mitochondrial ribosomal protein L4 (L4mt) [Mus musculus]
gi|37572295|gb|AAH39983.2| Mitochondrial ribosomal protein L4 [Mus musculus]
gi|38511681|gb|AAH61095.1| Mitochondrial ribosomal protein L4 [Mus musculus]
gi|148693202|gb|EDL25149.1| mitochondrial ribosomal protein L4, isoform CRA_c [Mus musculus]
Length = 294
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 91/164 (55%), Gaps = 3/164 (1%)
Query: 66 ILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPI 125
I P S G D +L+K L + Q V + F E G L DVF
Sbjct: 34 ISEPRDSAGLL--DPVLRKCELRIPVHRRPVQAWVESLRGFEQERIGLAELHPDVFATAP 91
Query: 126 RKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGGTT 185
R DI+H+V WQ R+ +TKT +EVSG G+KPW+QKG+GRARHG++R P +RGG
Sbjct: 92 RLDIVHQVAIWQRNFRRISYANTKTRAEVSGGGRKPWQQKGSGRARHGSIRSPLWRGGGV 151
Query: 186 MHGPK-PRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
HGP+ P S+ L KVR LGLK+AL+ + + + + SL L
Sbjct: 152 AHGPRGPTSYYYMLPMKVRALGLKVALTVKLMQDDLHIVDSLEL 195
>gi|406837803|ref|ZP_11097397.1| 50S ribosomal protein L4 [Lactobacillus vini DSM 20605]
Length = 207
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 77/120 (64%), Gaps = 3/120 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +D G + L+ ++F + + ++ V Q A +QGTH+ K S VSG
Sbjct: 1 MPTVALYKQDGSKNGEVSLSKEIFGIKPNESVVFDAVLMQRASLRQGTHAVKNRSAVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRAR G++R PQ+ GG T+ GP PRS++ KL +KVRRL +K LS + A+
Sbjct: 61 GKKPWRQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYSYKLPRKVRRLAIKSVLSQKVAD 120
>gi|257870518|ref|ZP_05650171.1| ribosomal protein L4 [Enterococcus gallinarum EG2]
gi|357049034|ref|ZP_09110263.1| 50S ribosomal protein L4 [Enterococcus saccharolyticus 30_1]
gi|257804682|gb|EEV33504.1| ribosomal protein L4 [Enterococcus gallinarum EG2]
gi|355384334|gb|EHG31402.1| 50S ribosomal protein L4 [Enterococcus saccharolyticus 30_1]
Length = 207
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 3/119 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L ++F + + +++ + Q A +QGTH+ K S V G
Sbjct: 1 MPNVALFKQDGSQNGEITLNEEIFGIEPNETVVYDAIIMQRASLRQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAA 216
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS + A
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSEKVA 119
>gi|21909577|ref|NP_663845.1| 50S ribosomal protein L4 [Streptococcus pyogenes MGAS315]
gi|342179199|sp|P0DE54.1|RL4_STRP3 RecName: Full=50S ribosomal protein L4
gi|21903758|gb|AAM78648.1| 50S ribosomal protein L4 [Streptococcus pyogenes MGAS315]
Length = 207
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDK 122
>gi|170017942|ref|YP_001728861.1| 50S ribosomal protein L4 [Leuconostoc citreum KM20]
gi|414597678|ref|ZP_11447239.1| 50S ribosomal protein L4 [Leuconostoc citreum LBAE E16]
gi|421876144|ref|ZP_16307704.1| 50S ribosomal protein L4 [Leuconostoc citreum LBAE C10]
gi|421878523|ref|ZP_16310003.1| 50S ribosomal protein L4 [Leuconostoc citreum LBAE C11]
gi|226730683|sp|B1MW13.1|RL4_LEUCK RecName: Full=50S ribosomal protein L4
gi|169804799|gb|ACA83417.1| 50S ribosomal protein L4 [Leuconostoc citreum KM20]
gi|372558179|emb|CCF23824.1| 50S ribosomal protein L4 [Leuconostoc citreum LBAE C10]
gi|390447650|emb|CCF26123.1| 50S ribosomal protein L4 [Leuconostoc citreum LBAE C11]
gi|390481589|emb|CCF29300.1| 50S ribosomal protein L4 [Leuconostoc citreum LBAE E16]
Length = 207
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 72/109 (66%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VF + +I V Q A +QGTH+ K S VSG G+KPW+QKGTGRAR G++R PQ
Sbjct: 23 VFAIEPNNAVITDAVLMQRASMRQGTHAVKNRSAVSGGGRKPWKQKGTGRARAGSIREPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
FRGG + GP PRS+A ++N+K +L LK LS + AEGK+ + +LS
Sbjct: 83 FRGGGIVFGPTPRSYAYRINRKAYQLALKSVLSQKVAEGKLVVVDALSF 131
>gi|262038243|ref|ZP_06011633.1| ribosomal protein, L4/L1 family [Leptotrichia goodfellowii F0264]
gi|261747710|gb|EEY35159.1| ribosomal protein, L4/L1 family [Leptotrichia goodfellowii F0264]
Length = 214
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 88/154 (57%), Gaps = 11/154 (7%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+PV N + D G + + ++F + K ++H V+ +LA ++G STKT +EV G
Sbjct: 1 MPVLNTYKLDGSKAGTVEVKEEIFGIEPNKTVMHEVLVAELAGAREGNASTKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KP+RQKGTGRAR G+ R P GG +HGPKPR + K+NKKVRRL L+ AL+ +
Sbjct: 61 GRKPFRQKGTGRARQGSTRAPHMVGGGVVHGPKPRDYTKKVNKKVRRLALRSALATKINN 120
Query: 218 GKVSLSVSLSLFLRPSFSLSLKNTDTHVHIVSSI 251
G L + F+L + T T V ++
Sbjct: 121 G--------DLIVLDDFTLDVPKTKTFVQFAKAL 146
>gi|425737517|ref|ZP_18855789.1| 50S ribosomal protein L4 [Staphylococcus massiliensis S46]
gi|425481771|gb|EKU48929.1| 50S ribosomal protein L4 [Staphylococcus massiliensis S46]
Length = 207
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VF + + ++ + Q A +QGTHS K S V G GKKPWRQKGTGRAR
Sbjct: 15 GSVELNDAVFAIEPNESVLFEAINLQRASLRQGTHSVKNRSAVRGGGKKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG--KVSLSVSLSLF 229
GT+R PQ+RGG + GP PRS+A K+ KK+RRL L+ ALS + E K+ +L
Sbjct: 75 QGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENEFKIVDGFNLEAP 134
Query: 230 LRPSFSLSLKNTDTHVHIV 248
F +L N D + ++
Sbjct: 135 KTKEFKTTLTNLDLNKKVL 153
>gi|386845735|ref|YP_006263748.1| 50S ribosomal protein L4 [Actinoplanes sp. SE50/110]
gi|359833239|gb|AEV81680.1| 50S ribosomal protein L4 [Actinoplanes sp. SE50/110]
Length = 215
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 76/120 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N G + L VFD ++H+VV QLA +QGTH KT EV+G GKK
Sbjct: 4 VDIINAEGAKAGSVDLPASVFDAQANIPLMHQVVVAQLAAARQGTHKAKTRGEVAGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P++QKGTGRAR G++R PQF GG +HGP PR ++ + KK++ L+ ALS RA +G+V
Sbjct: 64 PYKQKGTGRARQGSIRAPQFTGGGVVHGPVPRDYSQRTPKKMKAAALRGALSDRARDGRV 123
>gi|335040796|ref|ZP_08533918.1| ribosomal protein L4/L1e [Caldalkalibacillus thermarum TA2.A1]
gi|334179371|gb|EGL82014.1| ribosomal protein L4/L1e [Caldalkalibacillus thermarum TA2.A1]
Length = 207
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + LA VF + + ++H V Q A + GTH+TK + V G
Sbjct: 1 MPKVTLYNQNGSIVGEIELADSVFGIEPNQYVLHDAVVMQRASMRAGTHATKNRAAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRARHG++R PQ+ GG + GP PR + KL KKVRRL +K ALS++
Sbjct: 61 GRKPWRQKGTGRARHGSIRAPQWVGGGVVFGPTPRKYGYKLPKKVRRLAIKSALSSKVKN 120
Query: 218 GKVSLSVSLSL 228
++ + L+L
Sbjct: 121 DEIKVLDQLTL 131
>gi|116671520|ref|YP_832453.1| 50S ribosomal protein L4P [Arthrobacter sp. FB24]
gi|116611629|gb|ABK04353.1| LSU ribosomal protein L4P [Arthrobacter sp. FB24]
Length = 205
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 78/123 (63%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGTH TKT +EVSG G+KP++QKGTGRAR G++
Sbjct: 9 LPAEIFDVQTNVPLLHQVVVAQLAAARQGTHKTKTRAEVSGAGRKPFKQKGTGRARQGSI 68
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS 235
R P GG +HGP PR ++ + KK+ L+ ALS RA G++ + L +PS
Sbjct: 69 RAPHMTGGGVVHGPTPRDYSQRTPKKMIAAALRGALSDRARNGRIHVVAELVAGTKPSAK 128
Query: 236 LSL 238
+L
Sbjct: 129 EAL 131
>gi|238855069|ref|ZP_04645397.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
269-3]
gi|238832313|gb|EEQ24622.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
269-3]
Length = 205
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 77/120 (64%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
+D G + L +VF + ++++ V Q A +QGTH+TK S V G GKKPWRQKGTG
Sbjct: 12 KDAGEVTLNDNVFGIEPNENVVFDAVIRQRAGMRQGTHATKNRSAVRGGGKKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG T+ GP PRS+A L +K RRL +K LS + + + + LSL
Sbjct: 72 RARQGSIRAPQWRGGGTVFGPTPRSYAYSLPRKARRLAIKSVLSQKLQDNNLIVLDQLSL 131
>gi|383479251|ref|YP_005388145.1| 50S ribosomal protein L4 [Streptococcus pyogenes MGAS15252]
gi|383493175|ref|YP_005410851.1| 50S ribosomal protein L4 [Streptococcus pyogenes MGAS1882]
gi|378927241|gb|AFC65447.1| LSU ribosomal protein (L4p) RplD [Streptococcus pyogenes MGAS15252]
gi|378928903|gb|AFC67320.1| LSU ribosomal protein (L4p) RplD [Streptococcus pyogenes MGAS1882]
Length = 207
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDK 122
>gi|418315622|ref|ZP_12927079.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21340]
gi|365243062|gb|EHM83753.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21340]
Length = 207
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 74/111 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + ++ + Q A +QGTH+ K S VSG G+KPW+QKGTGRAR
Sbjct: 15 GSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPWKQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
GT+R PQ+RGG + GP PRS+A K+ KK+RRL L+ ALS +A E +++
Sbjct: 75 QGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKAQENGLTV 125
>gi|417895551|ref|ZP_12539537.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21235]
gi|341841679|gb|EGS83132.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21235]
Length = 207
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 74/111 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + ++ + Q A +QGTH+ K S VSG G+KPW+QKGTGRAR
Sbjct: 15 GSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPWKQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
GT+R PQ+RGG + GP PRS+A K+ KK+RRL L+ ALS +A E +++
Sbjct: 75 QGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKAQENGLTV 125
>gi|15674288|ref|NP_268461.1| 50S ribosomal protein L4 [Streptococcus pyogenes SF370]
gi|19745242|ref|NP_606378.1| 50S ribosomal protein L4 [Streptococcus pyogenes MGAS8232]
gi|28894955|ref|NP_801305.1| 50S ribosomal protein L4 [Streptococcus pyogenes SSI-1]
gi|50913440|ref|YP_059412.1| 50S ribosomal protein L4 [Streptococcus pyogenes MGAS10394]
gi|71902710|ref|YP_279513.1| 50S ribosomal protein L4 [Streptococcus pyogenes MGAS6180]
gi|71909859|ref|YP_281409.1| 50S ribosomal protein L4 [Streptococcus pyogenes MGAS5005]
gi|94987676|ref|YP_595777.1| 50S ribosomal protein L4 [Streptococcus pyogenes MGAS9429]
gi|139472928|ref|YP_001127643.1| 50S ribosomal protein L4 [Streptococcus pyogenes str. Manfredo]
gi|251781516|ref|YP_002995817.1| 50S ribosomal protein L4 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|306828259|ref|ZP_07461519.1| ribosomal protein L4/L1 family protein [Streptococcus pyogenes ATCC
10782]
gi|386316025|ref|YP_006012189.1| 50S ribosomal protein L4 [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|386361924|ref|YP_006071255.1| 50S ribosomal protein L4 [Streptococcus pyogenes Alab49]
gi|392330392|ref|ZP_10275007.1| 50S ribosomal protein L4 [Streptococcus canis FSL Z3-227]
gi|408400792|ref|YP_006858755.1| 50S ribosomal protein L4 [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|410493814|ref|YP_006903660.1| 50S ribosomal protein L4 [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|410679737|ref|YP_006932139.1| 50S ribosomal protein L4 [Streptococcus pyogenes A20]
gi|417751859|ref|ZP_12400116.1| 50S ribosomal protein L4 [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|417855913|ref|ZP_12500972.1| 50S ribosomal protein L4 [Streptococcus pyogenes HKU QMH11M0907901]
gi|421893089|ref|ZP_16323658.1| LSU ribosomal protein L4p (L1e) [Streptococcus pyogenes NS88.2]
gi|46396575|sp|P60831.1|RL4_STRP8 RecName: Full=50S ribosomal protein L4
gi|73917536|sp|Q5XED4.1|RL4_STRP6 RecName: Full=50S ribosomal protein L4
gi|76363882|sp|P0C0D5.1|RL4_STRPY RecName: Full=50S ribosomal protein L4
gi|81171140|sp|P0C0D6.1|RL4_STRP1 RecName: Full=50S ribosomal protein L4
gi|109893643|sp|Q48VU8.1|RL4_STRPM RecName: Full=50S ribosomal protein L4
gi|166199912|sp|Q1JP16.1|RL4_STRPC RecName: Full=50S ribosomal protein L4
gi|166199913|sp|Q1JJ61.1|RL4_STRPD RecName: Full=50S ribosomal protein L4
gi|166199914|sp|A2RC15.1|RL4_STRPG RecName: Full=50S ribosomal protein L4
gi|342179200|sp|P0DE55.1|RL4_STRPQ RecName: Full=50S ribosomal protein L4
gi|13621368|gb|AAK33183.1| 50S ribosomal protein L4 [Streptococcus pyogenes M1 GAS]
gi|19747336|gb|AAL96877.1| 50S ribosomal protein L4 [Streptococcus pyogenes MGAS8232]
gi|28475247|emb|CAD67589.1| ribosomal protein L4 [Streptococcus pyogenes]
gi|28810200|dbj|BAC63138.1| 50S ribosomal protein L4 [Streptococcus pyogenes SSI-1]
gi|50902514|gb|AAT86229.1| LSU ribosomal protein L1E [Streptococcus pyogenes MGAS10394]
gi|71801805|gb|AAX71158.1| LSU ribosomal protein L1E [Streptococcus pyogenes MGAS6180]
gi|71852641|gb|AAZ50664.1| LSU ribosomal protein L1E [Streptococcus pyogenes MGAS5005]
gi|94541184|gb|ABF31233.1| LSU ribosomal protein L1E (L4P) [Streptococcus pyogenes MGAS9429]
gi|94543064|gb|ABF33112.1| LSU ribosomal protein L1E (L4P) [Streptococcus pyogenes MGAS10270]
gi|134271174|emb|CAM29387.1| 50S ribosomal protein L4 [Streptococcus pyogenes str. Manfredo]
gi|242390144|dbj|BAH80603.1| 50S ribosomal protein L4 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|304429570|gb|EFM32619.1| ribosomal protein L4/L1 family protein [Streptococcus pyogenes ATCC
10782]
gi|323126312|gb|ADX23609.1| 50S ribosomal protein L4 [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333772358|gb|EGL49214.1| 50S ribosomal protein L4 [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|350276333|gb|AEQ23701.1| 50S ribosomal protein L4 [Streptococcus pyogenes Alab49]
gi|379981143|emb|CCG27380.1| LSU ribosomal protein L4p (L1e) [Streptococcus pyogenes NS88.2]
gi|387932868|gb|EIK40981.1| 50S ribosomal protein L4 [Streptococcus pyogenes HKU QMH11M0907901]
gi|391418071|gb|EIQ80883.1| 50S ribosomal protein L4 [Streptococcus canis FSL Z3-227]
gi|395453087|dbj|BAM29426.1| 50S ribosomal protein L4 [Streptococcus pyogenes M1 476]
gi|407967020|dbj|BAM60258.1| 50S ribosomal protein L4 [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|409692326|gb|AFV37186.1| 50S ribosomal protein L4 [Streptococcus pyogenes A20]
gi|410438974|emb|CCI61602.1| 50S ribosomal protein L4 [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 207
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDK 122
>gi|418904613|ref|ZP_13458642.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377766153|gb|EHT89986.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC345D]
Length = 207
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 74/111 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + ++ + Q A +QGTH+ K S VSG G+KPW+QKGTGRAR
Sbjct: 15 GSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPWKQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
GT+R PQ+RGG + GP PRS+A K+ KK+RRL L+ ALS +A E +++
Sbjct: 75 QGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKAQENGLTV 125
>gi|222152266|ref|YP_002561441.1| 50S ribosomal protein L4 [Streptococcus uberis 0140J]
gi|254803757|sp|B9DSV1.1|RL4_STRU0 RecName: Full=50S ribosomal protein L4
gi|222113077|emb|CAR40441.1| 50S ribosomal protein L4 [Streptococcus uberis 0140J]
Length = 207
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDK 122
>gi|339624378|ref|ZP_08660167.1| 50S ribosomal protein L4 [Fructobacillus fructosus KCTC 3544]
Length = 207
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 73/113 (64%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L +VF V +I V Q A +QGTH+ K S VSG G+KPW+QKGTGRAR G++
Sbjct: 19 LNEEVFAVEANNAVITEAVLMQRASMRQGTHAVKNRSAVSGGGRKPWKQKGTGRARQGSI 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
R PQ+RGG + GP PRS+A ++NKK L LK ALS + A+ K+ + +L+
Sbjct: 79 RSPQWRGGGIVFGPTPRSYAYRINKKAYNLALKSALSQKVADNKLVVVDALAF 131
>gi|302669962|ref|YP_003829922.1| 50S ribosomal protein L4 [Butyrivibrio proteoclasticus B316]
gi|302394435|gb|ADL33340.1| ribosomal protein L4 RplD [Butyrivibrio proteoclasticus B316]
Length = 207
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 75/120 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L+ +F V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNMEGKEVGKIDLSDAIFGVEVNEHLVHMAVLQQLADNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G++R PQ++GG + P PR ++ K+NKK +R LK AL+ + +
Sbjct: 64 PWRQKGTGHARQGSIRAPQWKGGGVVFAPVPRDYSFKMNKKEKRAALKSALTDKVQNNNI 123
>gi|421875276|ref|ZP_16306870.1| 50S ribosomal protein L4 [Brevibacillus laterosporus GI-9]
gi|372455744|emb|CCF16419.1| 50S ribosomal protein L4 [Brevibacillus laterosporus GI-9]
Length = 207
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 86/154 (55%), Gaps = 11/154 (7%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N+ G + LA VF + ++ + Q A ++QGTH K SEV G
Sbjct: 1 MPKVALYNQTGAQVGDIELAEAVFGIEPNNAVLFDAIVMQQASQRQGTHDVKNRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ++GG + GP PR + KLN+KVRRL LK ALS +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWKGGGVVFGPTPRKYGYKLNRKVRRLALKSALSTKVQN 120
Query: 218 GKVSLSVSLSLFLRPSFSLSLKNTDTHVHIVSSI 251
+ L + + ++S T I+SS+
Sbjct: 121 NE--------LLVLDALTMSAPKTKEFAGILSSL 146
>gi|15925239|ref|NP_372773.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus Mu50]
gi|15927829|ref|NP_375362.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus N315]
gi|21283897|ref|NP_646985.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus MW2]
gi|49487031|ref|YP_044252.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650833|ref|YP_187048.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus COL]
gi|82751838|ref|YP_417579.1| 50S ribosomal protein L4 [Staphylococcus aureus RF122]
gi|87160155|ref|YP_494838.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88196161|ref|YP_500978.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|148268689|ref|YP_001247632.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus JH9]
gi|150394754|ref|YP_001317429.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus JH1]
gi|151222363|ref|YP_001333185.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156980564|ref|YP_001442823.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus Mu3]
gi|221140149|ref|ZP_03564642.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253317009|ref|ZP_04840222.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253729915|ref|ZP_04864080.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253734342|ref|ZP_04868507.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
TCH130]
gi|255007029|ref|ZP_05145630.2| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257794595|ref|ZP_05643574.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A9781]
gi|258408803|ref|ZP_05681087.1| 50S ribosomal protein L4 [Staphylococcus aureus A9763]
gi|258422402|ref|ZP_05685314.1| LSU ribosomal protein L4/L1 [Staphylococcus aureus A9719]
gi|258422696|ref|ZP_05685601.1| LSU ribosomal protein L4/L1 [Staphylococcus aureus A9635]
gi|258439791|ref|ZP_05690537.1| ribosomal protein L4 [Staphylococcus aureus A9299]
gi|258442653|ref|ZP_05691213.1| ribosomal protein L4/L1e [Staphylococcus aureus A8115]
gi|258446648|ref|ZP_05694803.1| 50S ribosomal protein L4 [Staphylococcus aureus A6300]
gi|258450234|ref|ZP_05698326.1| 50S ribosomal protein L4 [Staphylococcus aureus A6224]
gi|258450756|ref|ZP_05698815.1| ribosomal protein L4/L1e [Staphylococcus aureus A5948]
gi|258455394|ref|ZP_05703354.1| ribosomal protein L4/L1e [Staphylococcus aureus A5937]
gi|262048513|ref|ZP_06021397.1| 50S ribosomal protein L4 [Staphylococcus aureus D30]
gi|262052038|ref|ZP_06024249.1| 50S ribosomal protein L4 [Staphylococcus aureus 930918-3]
gi|269203882|ref|YP_003283151.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus ED98]
gi|282893687|ref|ZP_06301919.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A8117]
gi|282917594|ref|ZP_06325346.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
D139]
gi|282922118|ref|ZP_06329814.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A9765]
gi|283767341|ref|ZP_06340256.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus H19]
gi|284025275|ref|ZP_06379673.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus 132]
gi|294848782|ref|ZP_06789527.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A9754]
gi|295404925|ref|ZP_06814738.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A8819]
gi|296275960|ref|ZP_06858467.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus MR1]
gi|297209938|ref|ZP_06926334.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|297243983|ref|ZP_06927873.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A8796]
gi|300910950|ref|ZP_07128400.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus TCH70]
gi|304379433|ref|ZP_07362168.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|379015373|ref|YP_005291609.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VC40]
gi|379021913|ref|YP_005298575.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus M013]
gi|384548456|ref|YP_005737709.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ED133]
gi|384551035|ref|YP_005740287.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|384862893|ref|YP_005745613.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|384865431|ref|YP_005750790.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|384870797|ref|YP_005753511.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
T0131]
gi|385782484|ref|YP_005758655.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
11819-97]
gi|386729955|ref|YP_006196338.1| 50S ribosomal protein L4P [Staphylococcus aureus subsp. aureus
71193]
gi|386831821|ref|YP_006238475.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus HO
5096 0412]
gi|387143954|ref|YP_005732348.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus TW20]
gi|387151372|ref|YP_005742936.1| 50S ribosomal protein L4 [Staphylococcus aureus 04-02981]
gi|387603533|ref|YP_005735054.1| ribosomal protein L4/L1 family [Staphylococcus aureus subsp. aureus
ST398]
gi|387781212|ref|YP_005756010.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
LGA251]
gi|404479543|ref|YP_006710973.1| 50S ribosomal protein L4 [Staphylococcus aureus 08BA02176]
gi|415686906|ref|ZP_11450910.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CGS01]
gi|415692898|ref|ZP_11454789.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CGS03]
gi|416840553|ref|ZP_11903800.1| 50S ribosomal protein L4 [Staphylococcus aureus O11]
gi|416846677|ref|ZP_11906666.1| 50S ribosomal protein L4 [Staphylococcus aureus O46]
gi|417647844|ref|ZP_12297675.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21189]
gi|417652982|ref|ZP_12302720.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21172]
gi|417654631|ref|ZP_12304347.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21193]
gi|417795965|ref|ZP_12443182.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21305]
gi|417800514|ref|ZP_12447633.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21310]
gi|417801798|ref|ZP_12448880.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21318]
gi|417890906|ref|ZP_12534974.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21200]
gi|417893283|ref|ZP_12537318.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21201]
gi|417898922|ref|ZP_12542834.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21259]
gi|417900871|ref|ZP_12544749.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21266]
gi|417903514|ref|ZP_12547358.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21269]
gi|418279676|ref|ZP_12892887.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21178]
gi|418283860|ref|ZP_12896597.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21202]
gi|418287064|ref|ZP_12899696.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21209]
gi|418306863|ref|ZP_12918622.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21194]
gi|418310944|ref|ZP_12922475.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21331]
gi|418314361|ref|ZP_12925839.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21334]
gi|418319179|ref|ZP_12930565.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21232]
gi|418320234|ref|ZP_12931597.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VCU006]
gi|418425413|ref|ZP_12998505.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS1]
gi|418428304|ref|ZP_13001291.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS2]
gi|418431189|ref|ZP_13004088.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|418435096|ref|ZP_13006945.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS4]
gi|418437863|ref|ZP_13009638.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS5]
gi|418440795|ref|ZP_13012479.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS6]
gi|418443765|ref|ZP_13015350.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS7]
gi|418446764|ref|ZP_13018224.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS8]
gi|418449853|ref|ZP_13021222.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS9]
gi|418452687|ref|ZP_13024008.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS10]
gi|418455647|ref|ZP_13026895.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418458523|ref|ZP_13029711.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418560150|ref|ZP_13124672.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21252]
gi|418563535|ref|ZP_13127971.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21262]
gi|418568432|ref|ZP_13132778.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21272]
gi|418572018|ref|ZP_13136233.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21283]
gi|418573202|ref|ZP_13137402.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21333]
gi|418577450|ref|ZP_13141548.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418599499|ref|ZP_13162982.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21343]
gi|418639956|ref|ZP_13202194.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus IS-3]
gi|418642224|ref|ZP_13204419.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-24]
gi|418645222|ref|ZP_13207349.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-55]
gi|418648043|ref|ZP_13210093.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-88]
gi|418650862|ref|ZP_13212879.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-91]
gi|418653538|ref|ZP_13215476.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-99]
gi|418657465|ref|ZP_13219232.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-105]
gi|418660091|ref|ZP_13221735.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-111]
gi|418663005|ref|ZP_13224533.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-122]
gi|418872397|ref|ZP_13426737.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-125]
gi|418876104|ref|ZP_13430352.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC93]
gi|418876456|ref|ZP_13430698.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418881937|ref|ZP_13436147.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418882211|ref|ZP_13436415.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418884860|ref|ZP_13439016.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1150]
gi|418887485|ref|ZP_13441624.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1524]
gi|418893028|ref|ZP_13447133.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418901816|ref|ZP_13455860.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418910079|ref|ZP_13464067.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG547]
gi|418912831|ref|ZP_13466805.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418918315|ref|ZP_13472264.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC348]
gi|418923975|ref|ZP_13477881.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418926816|ref|ZP_13480706.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1612]
gi|418929692|ref|ZP_13483544.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1750]
gi|418932553|ref|ZP_13486379.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418946774|ref|ZP_13499183.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-157]
gi|418951668|ref|ZP_13503747.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-160]
gi|418955167|ref|ZP_13507115.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-189]
gi|418980700|ref|ZP_13528474.1| LSU ribosomal protein L1E (L4P) [Staphylococcus aureus subsp.
aureus DR10]
gi|418989280|ref|ZP_13536947.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1835]
gi|418989455|ref|ZP_13537119.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1096]
gi|418992240|ref|ZP_13539885.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG290]
gi|419774883|ref|ZP_14300836.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CO-23]
gi|419786249|ref|ZP_14311986.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus IS-M]
gi|421149847|ref|ZP_15609504.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|422743263|ref|ZP_16797255.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus MRSA177]
gi|422746515|ref|ZP_16800447.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus MRSA131]
gi|424774969|ref|ZP_18201970.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus CM05]
gi|424786232|ref|ZP_18213023.1| LSU ribosomal protein L4p (L1e) [Staphylococcus aureus CN79]
gi|440706709|ref|ZP_20887433.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21282]
gi|440735607|ref|ZP_20915210.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus DSM
20231]
gi|443635894|ref|ZP_21120013.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21236]
gi|443640544|ref|ZP_21124532.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21196]
gi|448742581|ref|ZP_21724521.1| 50S ribosomal protein L4 [Staphylococcus aureus KT/314250]
gi|448745007|ref|ZP_21726882.1| 50S ribosomal protein L4 [Staphylococcus aureus KT/Y21]
gi|46577149|sp|P61058.1|RL4_STAAM RecName: Full=50S ribosomal protein L4
gi|46577150|sp|P61059.1|RL4_STAAN RecName: Full=50S ribosomal protein L4
gi|46577151|sp|P61060.1|RL4_STAAW RecName: Full=50S ribosomal protein L4
gi|56749373|sp|Q6G772.1|RL4_STAAS RecName: Full=50S ribosomal protein L4
gi|81693960|sp|Q5HDV9.1|RL4_STAAC RecName: Full=50S ribosomal protein L4
gi|109893640|sp|Q2FEP0.1|RL4_STAA3 RecName: Full=50S ribosomal protein L4
gi|109893641|sp|Q2YYP7.1|RL4_STAAB RecName: Full=50S ribosomal protein L4
gi|122538859|sp|Q2FW07.1|RL4_STAA8 RecName: Full=50S ribosomal protein L4
gi|166199911|sp|A7X5G2.1|RL4_STAA1 RecName: Full=50S ribosomal protein L4
gi|172049047|sp|A6QJ91.1|RL4_STAAE RecName: Full=50S ribosomal protein L4
gi|189042887|sp|A6U3X4.1|RL4_STAA2 RecName: Full=50S ribosomal protein L4
gi|189042888|sp|A5IV33.1|RL4_STAA9 RecName: Full=50S ribosomal protein L4
gi|13702049|dbj|BAB43341.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus N315]
gi|14248022|dbj|BAB58411.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus Mu50]
gi|21205339|dbj|BAB96033.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus MW2]
gi|49245474|emb|CAG43951.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285019|gb|AAW37113.1| ribosomal protein L4 [Staphylococcus aureus subsp. aureus COL]
gi|82657369|emb|CAI81810.1| 50S ribosomal protein L4 [Staphylococcus aureus RF122]
gi|87126129|gb|ABD20643.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203719|gb|ABD31529.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741758|gb|ABQ50056.1| LSU ribosomal protein L4P [Staphylococcus aureus subsp. aureus JH9]
gi|149947206|gb|ABR53142.1| ribosomal protein L4/L1e [Staphylococcus aureus subsp. aureus JH1]
gi|150375163|dbj|BAF68423.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156722699|dbj|BAF79116.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus Mu3]
gi|253726362|gb|EES95091.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253727659|gb|EES96388.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
TCH130]
gi|257788567|gb|EEV26907.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A9781]
gi|257840486|gb|EEV64946.1| 50S ribosomal protein L4 [Staphylococcus aureus A9763]
gi|257841833|gb|EEV66270.1| LSU ribosomal protein L4/L1 [Staphylococcus aureus A9719]
gi|257847107|gb|EEV71116.1| LSU ribosomal protein L4/L1 [Staphylococcus aureus A9635]
gi|257847567|gb|EEV71569.1| ribosomal protein L4 [Staphylococcus aureus A9299]
gi|257851774|gb|EEV75708.1| ribosomal protein L4/L1e [Staphylococcus aureus A8115]
gi|257854716|gb|EEV77664.1| 50S ribosomal protein L4 [Staphylococcus aureus A6300]
gi|257856326|gb|EEV79235.1| 50S ribosomal protein L4 [Staphylococcus aureus A6224]
gi|257861539|gb|EEV84341.1| ribosomal protein L4/L1e [Staphylococcus aureus A5948]
gi|257862605|gb|EEV85373.1| ribosomal protein L4/L1e [Staphylococcus aureus A5937]
gi|259160093|gb|EEW45126.1| 50S ribosomal protein L4 [Staphylococcus aureus 930918-3]
gi|259163371|gb|EEW47929.1| 50S ribosomal protein L4 [Staphylococcus aureus D30]
gi|262076172|gb|ACY12145.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus ED98]
gi|269941838|emb|CBI50248.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus TW20]
gi|282318556|gb|EFB48914.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
D139]
gi|282593586|gb|EFB98579.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A9765]
gi|282763745|gb|EFC03873.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A8117]
gi|283461220|gb|EFC08304.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus H19]
gi|283471471|emb|CAQ50682.1| ribosomal protein L4/L1 family [Staphylococcus aureus subsp. aureus
ST398]
gi|285817911|gb|ADC38398.1| 50S ribosomal protein L4 [Staphylococcus aureus 04-02981]
gi|294824161|gb|EFG40585.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A9754]
gi|294969870|gb|EFG45888.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A8819]
gi|296885611|gb|EFH24548.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|297178761|gb|EFH38006.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A8796]
gi|298695505|gb|ADI98727.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ED133]
gi|300887930|gb|EFK83125.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus TCH70]
gi|302333885|gb|ADL24078.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302752122|gb|ADL66299.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304341965|gb|EFM07869.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|312830598|emb|CBX35440.1| 50S ribosomal protein L4 (BL4) [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315129671|gb|EFT85662.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CGS03]
gi|315198221|gb|EFU28552.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140213|gb|EFW32072.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus MRSA131]
gi|320143483|gb|EFW35264.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus MRSA177]
gi|323440071|gb|EGA97786.1| 50S ribosomal protein L4 [Staphylococcus aureus O11]
gi|323442745|gb|EGB00371.1| 50S ribosomal protein L4 [Staphylococcus aureus O46]
gi|329314932|gb|AEB89345.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
T0131]
gi|329723693|gb|EGG60222.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21172]
gi|329730071|gb|EGG66461.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21193]
gi|329732021|gb|EGG68376.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21189]
gi|334270378|gb|EGL88783.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21305]
gi|334271060|gb|EGL89455.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21310]
gi|334276059|gb|EGL94327.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21318]
gi|341846640|gb|EGS87831.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21266]
gi|341846851|gb|EGS88039.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21259]
gi|341849928|gb|EGS91064.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21269]
gi|341853784|gb|EGS94664.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21200]
gi|341855479|gb|EGS96324.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21201]
gi|344178314|emb|CCC88800.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
LGA251]
gi|359831222|gb|AEV79200.1| LSU ribosomal protein L4p (L1e) [Staphylococcus aureus subsp.
aureus M013]
gi|364523473|gb|AEW66223.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
11819-97]
gi|365164488|gb|EHM56402.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21209]
gi|365165771|gb|EHM57520.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21202]
gi|365170329|gb|EHM61354.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21178]
gi|365227938|gb|EHM69125.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VCU006]
gi|365233987|gb|EHM74929.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21334]
gi|365235734|gb|EHM76645.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21331]
gi|365241432|gb|EHM82178.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21232]
gi|365246254|gb|EHM86824.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21194]
gi|371970773|gb|EHO88189.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21262]
gi|371972861|gb|EHO90230.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21252]
gi|371977717|gb|EHO94977.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21283]
gi|371979661|gb|EHO96887.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21272]
gi|371983289|gb|EHP00436.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21333]
gi|374364070|gb|AEZ38175.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VC40]
gi|374396815|gb|EHQ68040.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21343]
gi|375015574|gb|EHS09221.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus IS-3]
gi|375017272|gb|EHS10893.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-24]
gi|375018726|gb|EHS12296.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-99]
gi|375023576|gb|EHS17026.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-55]
gi|375027308|gb|EHS20672.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-88]
gi|375027518|gb|EHS20881.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-91]
gi|375030629|gb|EHS23939.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-105]
gi|375033194|gb|EHS26399.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-111]
gi|375034998|gb|EHS28137.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-122]
gi|375367239|gb|EHS71206.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-125]
gi|375371620|gb|EHS75390.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-189]
gi|375371956|gb|EHS75713.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-160]
gi|375377424|gb|EHS80892.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-157]
gi|377698773|gb|EHT23120.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377699332|gb|EHT23678.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377700875|gb|EHT25208.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377715567|gb|EHT39756.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377718120|gb|EHT42292.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377718692|gb|EHT42863.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377725906|gb|EHT50018.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377727893|gb|EHT51995.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG547]
gi|377728802|gb|EHT52898.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377729561|gb|EHT53653.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1213]
gi|377740526|gb|EHT64522.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377745169|gb|EHT69145.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377748242|gb|EHT72203.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377749557|gb|EHT73505.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG290]
gi|377756098|gb|EHT79995.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1524]
gi|377758874|gb|EHT82755.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377767832|gb|EHT91618.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC93]
gi|377768601|gb|EHT92379.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC348]
gi|377772727|gb|EHT96473.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC128]
gi|379991559|gb|EIA13030.1| LSU ribosomal protein L1E (L4P) [Staphylococcus aureus subsp.
aureus DR10]
gi|383360895|gb|EID38281.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus IS-M]
gi|383971282|gb|EID87361.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CO-23]
gi|384231248|gb|AFH70495.1| LSU ribosomal protein L1E (L4P) [Staphylococcus aureus subsp.
aureus 71193]
gi|385197213|emb|CCG16859.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus HO
5096 0412]
gi|387715937|gb|EIK04003.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS2]
gi|387716429|gb|EIK04487.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387716976|gb|EIK05013.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS1]
gi|387723639|gb|EIK11372.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS4]
gi|387725035|gb|EIK12665.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS5]
gi|387728127|gb|EIK15626.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS6]
gi|387733076|gb|EIK20273.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS8]
gi|387734069|gb|EIK21225.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS7]
gi|387734396|gb|EIK21549.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS9]
gi|387741967|gb|EIK28791.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS10]
gi|387742542|gb|EIK29355.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387743749|gb|EIK30534.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|394330022|gb|EJE56119.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|402347071|gb|EJU82138.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus CM05]
gi|404441032|gb|AFR74225.1| 50S ribosomal protein L4 [Staphylococcus aureus 08BA02176]
gi|408424161|emb|CCJ11572.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|408426150|emb|CCJ13537.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|408428138|emb|CCJ15501.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|408430127|emb|CCJ27292.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|408432114|emb|CCJ19429.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|408434108|emb|CCJ21393.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|408436101|emb|CCJ23361.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|408438084|emb|CCJ25327.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|421955501|gb|EKU07839.1| LSU ribosomal protein L4p (L1e) [Staphylococcus aureus CN79]
gi|436430487|gb|ELP27849.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436506860|gb|ELP42619.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21282]
gi|443405065|gb|ELS63677.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21196]
gi|443408710|gb|ELS67227.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21236]
gi|445546740|gb|ELY15026.1| 50S ribosomal protein L4 [Staphylococcus aureus KT/314250]
gi|445561623|gb|ELY17815.1| 50S ribosomal protein L4 [Staphylococcus aureus KT/Y21]
Length = 207
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 74/111 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + ++ + Q A +QGTH+ K S VSG G+KPW+QKGTGRAR
Sbjct: 15 GSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPWKQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
GT+R PQ+RGG + GP PRS+A K+ KK+RRL L+ ALS +A E +++
Sbjct: 75 QGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKAQENGLTV 125
>gi|336326438|ref|YP_004606404.1| 50S ribosomal protein L4 [Corynebacterium resistens DSM 45100]
gi|336102420|gb|AEI10240.1| 50S ribosomal protein L4 [Corynebacterium resistens DSM 45100]
Length = 217
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 83/136 (61%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L +FD + ++H+VV QLA ++QGTH+TK +V G
Sbjct: 3 NLKLDVHTADGKTNGSVELPASIFDAEVSVALMHQVVTAQLAAKRQGTHATKARGDVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R P F GG T+HGP+PR ++ + KK++ L+ AL+ RA
Sbjct: 63 GRKPWRQKGTGRARQGSIRAPHFTGGGTVHGPQPRDYSQRTPKKMKAAALRGALTDRARH 122
Query: 218 GKVSLSVSLSLFLRPS 233
++ + L PS
Sbjct: 123 ARIHVVEDLVPGQTPS 138
>gi|429758166|ref|ZP_19290685.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 181 str.
F0379]
gi|429173825|gb|EKY15334.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 181 str.
F0379]
Length = 216
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 84/133 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V + + G + L +VFDV ++H+VV QLA +QGTH+TKT VSG GKK
Sbjct: 9 IDVLDLKGKKAGTVDLPAEVFDVETNIPLMHQVVVAQLAAGRQGTHATKTRGMVSGGGKK 68
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTG AR G++R P F GG +HGP+PR ++ + KK++ L+ ALS RA G++
Sbjct: 69 PFRQKGTGNARQGSIRAPHFTGGGIVHGPQPRDYSQRTPKKMKVGALRSALSDRARNGRI 128
Query: 221 SLSVSLSLFLRPS 233
+ +L +PS
Sbjct: 129 HVVTALFEGEKPS 141
>gi|320160415|ref|YP_004173639.1| 50S ribosomal protein L4 [Anaerolinea thermophila UNI-1]
gi|319994268|dbj|BAJ63039.1| 50S ribosomal protein L4 [Anaerolinea thermophila UNI-1]
Length = 208
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 80/130 (61%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+++ V N + + L +F+ PI D++H+ Q+A + GTH TKT +EVSG G
Sbjct: 1 MLVDVVNMQGQKVSSVELPESIFEAPIYIDLMHQAYVRQMANARLGTHDTKTRNEVSGGG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KPWRQKGTGRAR G+ R P + G +H P PRS+ + +K+RR L+ ALS +AAE
Sbjct: 61 RKPWRQKGTGRARQGSTRSPVWAKGAKVHTPHPRSYVQLMPRKMRRAALRSALSVKAAEN 120
Query: 219 KVSLSVSLSL 228
+ + L+L
Sbjct: 121 AIVVVDQLTL 130
>gi|220913431|ref|YP_002488740.1| 50S ribosomal protein L4 [Arthrobacter chlorophenolicus A6]
gi|219860309|gb|ACL40651.1| ribosomal protein L4/L1e [Arthrobacter chlorophenolicus A6]
Length = 206
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 78/123 (63%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGTH TKT +EVSG G+KP++QKGTGRAR G++
Sbjct: 9 LPAEIFDVQTNVPLLHQVVVAQLAAARQGTHKTKTRAEVSGAGRKPFKQKGTGRARQGSI 68
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS 235
R P GG +HGP PR ++ + KK+ L+ ALS RA G++ + L +PS
Sbjct: 69 RAPHMTGGGVVHGPTPRDYSQRTPKKMIAAALRGALSDRARNGRIHVVADLVEGTKPSAK 128
Query: 236 LSL 238
+L
Sbjct: 129 TAL 131
>gi|422758024|ref|ZP_16811786.1| 50S ribosomal protein L4 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322410859|gb|EFY01767.1| 50S ribosomal protein L4 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 207
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDK 122
>gi|256830537|ref|YP_003159265.1| 50S ribosomal protein L4 [Desulfomicrobium baculatum DSM 4028]
gi|256579713|gb|ACU90849.1| ribosomal protein L4/L1e [Desulfomicrobium baculatum DSM 4028]
Length = 206
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 72/103 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + LA D+F V +R +++H V+ LAK + GT KT V G GKKPWRQKGTGRAR
Sbjct: 15 GEISLADDIFQVEVRPEVLHLAVKSHLAKLRSGTVGVKTRGLVRGGGKKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G+ R P +R G +HGP+ R ++ K+NK++R+L LK+A+S+R
Sbjct: 75 AGSSRSPLWRSGAVIHGPQARDYSFKINKQIRKLALKMAISSR 117
>gi|260681847|ref|YP_003213132.1| 50S ribosomal protein L4 [Clostridium difficile CD196]
gi|260685445|ref|YP_003216578.1| 50S ribosomal protein L4 [Clostridium difficile R20291]
gi|423081657|ref|ZP_17070259.1| 50S ribosomal protein L4 [Clostridium difficile 002-P50-2011]
gi|423085189|ref|ZP_17073644.1| 50S ribosomal protein L4 [Clostridium difficile 050-P50-2011]
gi|423089504|ref|ZP_17077862.1| 50S ribosomal protein L4 [Clostridium difficile 70-100-2010]
gi|260208010|emb|CBA60188.1| 50S ribosomal protein L4 [Clostridium difficile CD196]
gi|260211461|emb|CBE01581.1| 50S ribosomal protein L4 [Clostridium difficile R20291]
gi|357550235|gb|EHJ32060.1| 50S ribosomal protein L4 [Clostridium difficile 002-P50-2011]
gi|357550521|gb|EHJ32335.1| 50S ribosomal protein L4 [Clostridium difficile 050-P50-2011]
gi|357558114|gb|EHJ39621.1| 50S ribosomal protein L4 [Clostridium difficile 70-100-2010]
Length = 217
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 84/133 (63%), Gaps = 3/133 (2%)
Query: 99 LVIPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVS 155
+ +P N N ++ G + L+ +F V + +++ VV+ QLA ++QGT S KT +EV
Sbjct: 9 ITMPKLNVLNVSGQNVGEIELSDSIFGVEVNGHVLYEVVKNQLANKRQGTQSAKTRAEVR 68
Query: 156 GTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
G G+KPW+QKGTGRAR G+ R Q+ GG PKPRS+ L KKVRRL +K ALS++
Sbjct: 69 GGGRKPWKQKGTGRARQGSTRSVQWVGGGVAFAPKPRSYKYTLPKKVRRLAMKSALSSKV 128
Query: 216 AEGKVSLSVSLSL 228
+V + +L++
Sbjct: 129 QNSEVIVLDALNM 141
>gi|195952644|ref|YP_002120934.1| 50S ribosomal protein L4 [Hydrogenobaculum sp. Y04AAS1]
gi|226730675|sp|B4U745.1|RL4_HYDS0 RecName: Full=50S ribosomal protein L4
gi|195932256|gb|ACG56956.1| ribosomal protein L4/L1e [Hydrogenobaculum sp. Y04AAS1]
Length = 200
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 73/111 (65%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L DVF+V +K I+ VVRWQLAKR+QGTHSTKT +EV+ + KK QKGTG ARHG
Sbjct: 8 LRDDVFNVEPKKHILWDVVRWQLAKRRQGTHSTKTRAEVNCSKKKIMPQKGTGNARHGAR 67
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSL 226
F GG +HGP PR + KL+KK R++ L +ALS +A V + SL
Sbjct: 68 SANIFVGGGVVHGPTPRDYEYKLSKKYRKIALAMALSTKAKNNSVYVLESL 118
>gi|84503641|ref|ZP_01001679.1| 50S ribosomal protein L4 [Oceanicola batsensis HTCC2597]
gi|84387938|gb|EAQ00990.1| 50S ribosomal protein L4 [Oceanicola batsensis HTCC2597]
Length = 205
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 68/107 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++F + R DI+HRVVRWQ QQGTH KT SE S + KK +RQKGTG AR
Sbjct: 14 GSVDLGDEIFGLEPRADILHRVVRWQRNNAQQGTHKVKTRSETSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
HG P FR G GP PRSH L KK R+LGLK ALSA+ EG
Sbjct: 74 HGDRNAPIFRKGGIYKGPVPRSHGHDLPKKFRKLGLKHALSAKVKEG 120
>gi|403071308|ref|ZP_10912640.1| 50S ribosomal protein L4 [Oceanobacillus sp. Ndiop]
Length = 207
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 89/156 (57%), Gaps = 9/156 (5%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +D G + L VF + ++H V Q A +QGTH+ K S+V G
Sbjct: 1 MPKVALLKQDGSNAGDIELNDSVFGIEPNTHVLHEAVVMQRASMRQGTHAVKNRSDVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+ GG + GP PRS++ KL KKVRRL LK ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWVGGGVVFGPTPRSYSYKLPKKVRRLALKSALSSKVKE 120
Query: 218 GKVSLSVSLSLFLRPSFSLSLK-----NTDTHVHIV 248
+ + S+++ P +K N DT V IV
Sbjct: 121 DSLLVLDSIAMDA-PKTKEVIKMLDALNVDTKVLIV 155
>gi|296449798|ref|ZP_06891567.1| ribosomal protein L4/L1 family protein [Clostridium difficile
NAP08]
gi|296877862|ref|ZP_06901884.1| ribosomal protein L4/L1 family protein [Clostridium difficile
NAP07]
gi|296261396|gb|EFH08222.1| ribosomal protein L4/L1 family protein [Clostridium difficile
NAP08]
gi|296431162|gb|EFH16987.1| ribosomal protein L4/L1 family protein [Clostridium difficile
NAP07]
Length = 217
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 84/133 (63%), Gaps = 3/133 (2%)
Query: 99 LVIPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVS 155
+ +P N N ++ G + L+ +F V + +++ VV+ QLA ++QGT S KT +EV
Sbjct: 9 ITMPKLNVLNVSGQNVGEIELSDSIFGVEVNGHVLYEVVKNQLANKRQGTQSAKTRAEVR 68
Query: 156 GTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
G G+KPW+QKGTGRAR G+ R Q+ GG PKPRS+ L KKVRRL +K ALS++
Sbjct: 69 GGGRKPWKQKGTGRARQGSTRSVQWVGGGVAFAPKPRSYKYTLPKKVRRLAMKSALSSKV 128
Query: 216 AEGKVSLSVSLSL 228
+V + +L++
Sbjct: 129 QNSEVIVLDALNM 141
>gi|410593768|ref|YP_006950495.1| 50S ribosomal protein L4 [Streptococcus agalactiae SA20-06]
gi|410517407|gb|AFV71551.1| 50S ribosomal protein L4 [Streptococcus agalactiae SA20-06]
Length = 207
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 67/100 (67%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLHQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
+RGG + GP PRS+ KL +KVRRL LK SA+ AE K
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDK 122
>gi|386773319|ref|ZP_10095697.1| 50S ribosomal protein L4 [Brachybacterium paraconglomeratum LC44]
Length = 315
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 83/132 (62%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ +L + V + + G + L +FDV +IH+VV Q A +QGTH KT +EV
Sbjct: 1 MAANLTVDVLDPAGKKSGTVELPASIFDVQTNVALIHQVVVAQQAAARQGTHKAKTRAEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G GKKPW+QKGTGRAR G+LR PQF GG T+HGP PR ++ + KK++ L+ ALS R
Sbjct: 61 RGGGKKPWKQKGTGRARQGSLRAPQFTGGGTVHGPVPRDYSQRTPKKMKAAALRGALSDR 120
Query: 215 AAEGKVSLSVSL 226
A G+V + SL
Sbjct: 121 ARNGRVHVVSSL 132
>gi|229917357|ref|YP_002886003.1| 50S ribosomal protein L4 [Exiguobacterium sp. AT1b]
gi|259491559|sp|C4KZP5.1|RL4_EXISA RecName: Full=50S ribosomal protein L4
gi|229468786|gb|ACQ70558.1| ribosomal protein L4/L1e [Exiguobacterium sp. AT1b]
Length = 207
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 74/109 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + LA +F + + +++ + Q A R+QGTH TK SEV G G+KPW+QKGTGRAR
Sbjct: 15 GEIELAEAIFGIEPNESVLYDAIVMQQASRRQGTHDTKGRSEVRGGGRKPWKQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
G++R PQ+ GG T+ GP PRS++ KL KKVRRL L ALS++ ++
Sbjct: 75 QGSIRSPQWVGGGTVFGPTPRSYSYKLPKKVRRLALLSALSSKVQNNEI 123
>gi|313472594|ref|ZP_07813083.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
1153]
gi|313448951|gb|EFR61269.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
1153]
Length = 178
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 77/120 (64%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
+D G + L +VF + ++++ V Q A +QGTH+TK S V G GKKPWRQKGTG
Sbjct: 12 KDAGEVTLNDNVFGIEPNENVVFDAVIRQRAGMRQGTHATKNRSAVRGGGKKPWRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
RAR G++R PQ+RGG T+ GP PRS+A L +K RRL +K LS + + + + LSL
Sbjct: 72 RARQGSIRAPQWRGGGTVFGPTPRSYAYSLPRKARRLAIKSVLSQKLQDNNLIVLDQLSL 131
>gi|421526107|ref|ZP_15972716.1| 50S ribosomal protein L4 [Fusobacterium nucleatum ChDC F128]
gi|402257866|gb|EJU08339.1| 50S ribosomal protein L4 [Fusobacterium nucleatum ChDC F128]
Length = 209
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 76/121 (62%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ + N E G + + VF + K ++H V+ +LA +QGT STKT + V G G+
Sbjct: 3 VLNIYNLAGEQTGTVEVKDTVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGR 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
KP++QKGTGRAR G++R P GG GP PRS+ K+NKKVR L LK ALSA+ A G
Sbjct: 63 KPFKQKGTGRARQGSIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALKSALSAKVAAGN 122
Query: 220 V 220
V
Sbjct: 123 V 123
>gi|365926342|ref|ZP_09449105.1| 50S ribosomal protein L4 [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420265979|ref|ZP_14768491.1| 50S ribosomal protein L4 [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394426842|gb|EJE99634.1| 50S ribosomal protein L4 [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 207
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 75/117 (64%), Gaps = 3/117 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L ++F + +++ V Q A +QGTH+ K S+VSG
Sbjct: 1 MPKVTLFKQDGSKNGEVELNENIFGIEPNDNVVFDAVIMQRASLRQGTHAVKNRSDVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
GKKPWRQKGTGRAR G++R PQ+ GG T+ GP PRS++ KL KKVRRL +K LS +
Sbjct: 61 GKKPWRQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYSYKLPKKVRRLAIKSVLSQK 117
>gi|270291132|ref|ZP_06197355.1| 50S ribosomal protein L4/L1 [Pediococcus acidilactici 7_4]
gi|304385413|ref|ZP_07367758.1| ribosomal protein L4/L1 family protein [Pediococcus acidilactici
DSM 20284]
gi|418069690|ref|ZP_12706967.1| 50S ribosomal protein L4P [Pediococcus acidilactici MA18/5M]
gi|427442937|ref|ZP_18925765.1| 50S ribosomal protein L4/L1 [Pediococcus lolii NGRI 0510Q]
gi|270280528|gb|EFA26363.1| 50S ribosomal protein L4/L1 [Pediococcus acidilactici 7_4]
gi|304328620|gb|EFL95841.1| ribosomal protein L4/L1 family protein [Pediococcus acidilactici
DSM 20284]
gi|357536221|gb|EHJ20252.1| 50S ribosomal protein L4P [Pediococcus acidilactici MA18/5M]
gi|425786585|dbj|GAC46553.1| 50S ribosomal protein L4/L1 [Pediococcus lolii NGRI 0510Q]
Length = 207
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 106 FFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
F +D G + L D+F + D++ V Q A +QGTH+ K S V G GKKPW
Sbjct: 6 LFKQDGTQNGTVELNADIFGIEPNNDVVFEAVVMQRASMRQGTHAVKNRSAVRGGGKKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
RQKGTGRAR G++R PQ+RGG + GP PRS+A + KK+RRL LK LS +
Sbjct: 66 RQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYAYSIPKKMRRLALKSVLSQK 117
>gi|403723479|ref|ZP_10945634.1| 50S ribosomal protein L4 [Gordonia rhizosphera NBRC 16068]
gi|403205995|dbj|GAB89965.1| 50S ribosomal protein L4 [Gordonia rhizosphera NBRC 16068]
Length = 224
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD P ++H+VV Q A +QGTH+TKT VSG G KP+RQKGTGRAR
Sbjct: 27 GTVDLPAELFDAPANIALMHQVVVAQQAAGRQGTHATKTRGAVSGGGAKPYRQKGTGRAR 86
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQF GG T+HGP+PR ++ + KK++ L+ ALS RA ++ + L
Sbjct: 87 QGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARNERIHVITELVAGQT 146
Query: 232 PS 233
PS
Sbjct: 147 PS 148
>gi|256762004|ref|ZP_05502584.1| predicted protein, partial [Enterococcus faecalis T3]
gi|256683255|gb|EEU22950.1| predicted protein [Enterococcus faecalis T3]
Length = 140
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L ++F + + +++ + Q A +QGTH+ K S V G
Sbjct: 1 MPNVALFKQDGTQNGEITLNEEIFGIEPNESVVYDAIIMQRASLRQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS + AE
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSDKVAE 120
Query: 218 GKVSLSVSLSL 228
+ LS
Sbjct: 121 NNLVAVEGLSF 131
>gi|255654163|ref|ZP_05399572.1| 50S ribosomal protein L4 [Clostridium difficile QCD-23m63]
Length = 207
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 82/128 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L+ +F V + +++ VV+ QLA ++QGT S KT +EV G G+K
Sbjct: 4 LNVLNVSGQNVGEIELSDSIFGVEVNGHVLYEVVKNQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PW+QKGTGRAR G+ R Q+ GG PKPRS+ L KKVRRL +K ALS++ +V
Sbjct: 64 PWKQKGTGRARQGSTRSVQWVGGGVAFAPKPRSYKYTLPKKVRRLAMKSALSSKVQNSEV 123
Query: 221 SLSVSLSL 228
+ +L++
Sbjct: 124 IVLDALNM 131
>gi|193211852|ref|YP_001997805.1| 50S ribosomal protein L4 [Chlorobaculum parvum NCIB 8327]
gi|226730637|sp|B3QR77.1|RL4_CHLP8 RecName: Full=50S ribosomal protein L4
gi|193085329|gb|ACF10605.1| ribosomal protein L4/L1e [Chlorobaculum parvum NCIB 8327]
Length = 208
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 85/131 (64%), Gaps = 1/131 (0%)
Query: 99 LVIPVTNFFNEDKGFMV-LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+ + V N + G +V L D+F V + + ++ V+ LA R+QGTH TKT +EV G
Sbjct: 1 MELKVLNIQGAETGEVVTLNDDIFAVEVSEHAMYLDVKAILANRRQGTHKTKTRAEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKP+RQKGTG AR G+ R P GG T+ GP+PRS+ K+N+KV++L + ALS++AA
Sbjct: 61 GKKPYRQKGTGNARQGSSRSPIMVGGGTIFGPQPRSYEQKVNRKVKQLARRSALSSKAAA 120
Query: 218 GKVSLSVSLSL 228
G++ + SL
Sbjct: 121 GQIVVVEDFSL 131
>gi|254973732|ref|ZP_05270204.1| 50S ribosomal protein L4 [Clostridium difficile QCD-66c26]
gi|255091121|ref|ZP_05320599.1| 50S ribosomal protein L4 [Clostridium difficile CIP 107932]
gi|255099233|ref|ZP_05328210.1| 50S ribosomal protein L4 [Clostridium difficile QCD-63q42]
gi|255305016|ref|ZP_05349188.1| 50S ribosomal protein L4 [Clostridium difficile ATCC 43255]
gi|255312776|ref|ZP_05354359.1| 50S ribosomal protein L4 [Clostridium difficile QCD-76w55]
gi|255515535|ref|ZP_05383211.1| 50S ribosomal protein L4 [Clostridium difficile QCD-97b34]
gi|255648630|ref|ZP_05395532.1| 50S ribosomal protein L4 [Clostridium difficile QCD-37x79]
gi|306518753|ref|ZP_07405100.1| 50S ribosomal protein L4 [Clostridium difficile QCD-32g58]
gi|384359400|ref|YP_006197252.1| 50S ribosomal protein L4 [Clostridium difficile BI1]
gi|400927241|ref|YP_001086538.2| 50S ribosomal protein L4 [Clostridium difficile 630]
gi|328887509|emb|CAJ66889.2| 50S ribosomal protein L4 [Clostridium difficile 630]
Length = 207
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 82/128 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L+ +F V + +++ VV+ QLA ++QGT S KT +EV G G+K
Sbjct: 4 LNVLNVSGQNVGEIELSDSIFGVEVNGHVLYEVVKNQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PW+QKGTGRAR G+ R Q+ GG PKPRS+ L KKVRRL +K ALS++ +V
Sbjct: 64 PWKQKGTGRARQGSTRSVQWVGGGVAFAPKPRSYKYTLPKKVRRLAMKSALSSKVQNSEV 123
Query: 221 SLSVSLSL 228
+ +L++
Sbjct: 124 IVLDALNM 131
>gi|310817007|ref|YP_003964971.1| 50S ribosomal protein L4 [Ketogulonicigenium vulgare Y25]
gi|385234595|ref|YP_005795937.1| 50S ribosomal protein L4 [Ketogulonicigenium vulgare WSH-001]
gi|308755742|gb|ADO43671.1| 50S ribosomal protein L4 [Ketogulonicigenium vulgare Y25]
gi|343463506|gb|AEM41941.1| 50S ribosomal protein L4 [Ketogulonicigenium vulgare WSH-001]
Length = 206
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 73/120 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I N G + L +F + R DI+HR+VRWQ A+ QQGTH SEVS + KK
Sbjct: 3 IDAINLDGGAAGSVELNDAIFALEPRADILHRLVRWQRARAQQGTHKVLGKSEVSYSTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
+RQKGTG ARHG+ + P FR G GP PRSH L KK R LGLK ALSA+A G++
Sbjct: 63 IYRQKGTGGARHGSKKAPIFRHGGVYKGPTPRSHEHDLTKKFRALGLKHALSAKAKAGEL 122
>gi|440785462|ref|ZP_20962219.1| 50S ribosomal protein L4 [Clostridium pasteurianum DSM 525]
gi|440218358|gb|ELP57580.1| 50S ribosomal protein L4 [Clostridium pasteurianum DSM 525]
Length = 206
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 79/123 (64%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN++ G + L+ +VF + D +H+VV LA ++QG S KT SEVSG
Sbjct: 1 MPTVGLFNKEGKKVGDIELSSEVFGTEVNSDALHQVVVALLANKRQGNQSAKTRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G KPWRQKGTGRAR G++R PQ+ G + PKPR + + + K +RR+ +K ALS++ AE
Sbjct: 61 GIKPWRQKGTGRARQGSIRSPQWIHGGIVFAPKPRDYRMSVPKSMRRVAMKSALSSKVAE 120
Query: 218 GKV 220
++
Sbjct: 121 NEI 123
>gi|347520760|ref|YP_004778331.1| 50S ribosomal protein L4 [Lactococcus garvieae ATCC 49156]
gi|385832123|ref|YP_005869898.1| 50S ribosomal protein L4 [Lactococcus garvieae Lg2]
gi|343179328|dbj|BAK57667.1| 50S ribosomal protein L4 [Lactococcus garvieae ATCC 49156]
gi|343181276|dbj|BAK59614.1| 50S ribosomal protein L4 [Lactococcus garvieae Lg2]
Length = 208
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Query: 106 FFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
F +D G + L VF + + ++ VV Q A +QGTH+ K S VSG GKKPW
Sbjct: 6 LFKQDGTQAGEVTLNDAVFGIEPNETVVFDVVLSQRASLRQGTHAHKNRSLVSGGGKKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
RQKGTGRAR G++R PQFRGG T+ GP PR++A KL +KVR+L LK A S +
Sbjct: 66 RQKGTGRARQGSIRSPQFRGGGTVFGPNPRNYAYKLPQKVRQLALKSAYSQK 117
>gi|257069507|ref|YP_003155762.1| 50S ribosomal protein L4 [Brachybacterium faecium DSM 4810]
gi|256560325|gb|ACU86172.1| LSU ribosomal protein L4P [Brachybacterium faecium DSM 4810]
Length = 312
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 83/132 (62%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ +L + V + + G + L +FDV +IH+VV Q A +QGTH KT +EV
Sbjct: 1 MAANLTVDVLDPAGKKSGSVELPASIFDVQTNVPLIHQVVVAQQAAARQGTHKAKTRAEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G GKKPW+QKGTGRAR G+LR PQF GG T+HGP PR ++ + KK++ L+ ALS R
Sbjct: 61 RGGGKKPWKQKGTGRARQGSLRAPQFTGGGTVHGPVPRDYSQRTPKKMKAAALRGALSDR 120
Query: 215 AAEGKVSLSVSL 226
A G+V + SL
Sbjct: 121 ARNGRVHVVSSL 132
>gi|256847764|ref|ZP_05553209.1| ribosomal protein L4/L1 [Lactobacillus coleohominis 101-4-CHN]
gi|256715453|gb|EEU30429.1| ribosomal protein L4/L1 [Lactobacillus coleohominis 101-4-CHN]
Length = 207
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 75/117 (64%), Gaps = 3/117 (2%)
Query: 106 FFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
FN+D G + L +F V + ++ + + Q A +QGTH+ K S V G GKKPW
Sbjct: 6 LFNQDGSQNGNIDLNDAIFGVEVNENAEYESIIRQRASLRQGTHAVKNRSAVRGGGKKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
RQKGTGRAR G++R PQFRGG + GP PRS+ +L +KVR+L +K ALS + A+ K
Sbjct: 66 RQKGTGRARQGSIRSPQFRGGGIVFGPTPRSYNYRLPRKVRQLAIKSALSQKVADDK 122
>gi|336322753|ref|YP_004602720.1| 50S ribosomal protein L4 [Flexistipes sinusarabici DSM 4947]
gi|336106334|gb|AEI14152.1| ribosomal protein L4/L1e [Flexistipes sinusarabici DSM 4947]
Length = 208
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 73/107 (68%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
++ + D P + ++H VV+ QLA R+ GTH+TK + +SG GKKPWRQKGTGRAR G+
Sbjct: 19 ISEQLMDYPEKPWLVHEVVKMQLAGRRAGTHATKNRANISGGGKKPWRQKGTGRARAGSS 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
R P + GG TM GP+PRS+A K+ KK R LK A S++ +G V +
Sbjct: 79 RSPLWVGGATMFGPQPRSYAYKMPKKKVRSALKSAFSSKLKDGSVKI 125
>gi|357237919|ref|ZP_09125258.1| 50S ribosomal protein L4 [Streptococcus ictaluri 707-05]
gi|356753423|gb|EHI70538.1| 50S ribosomal protein L4 [Streptococcus ictaluri 707-05]
Length = 207
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 72/113 (63%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L +F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++
Sbjct: 19 LNDSIFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSI 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
R PQ+RGG + GP PRS+ KL +KVRRL LK SA+ A+ K SLS
Sbjct: 79 RSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEKFVAVESLSF 131
>gi|317123096|ref|YP_004103099.1| 50S ribosomal protein L4P [Thermaerobacter marianensis DSM 12885]
gi|315593076|gb|ADU52372.1| LSU ribosomal protein L4P [Thermaerobacter marianensis DSM 12885]
Length = 212
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 80/120 (66%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L+ VF P+R+ ++H+ V LA +++GT +TKT VSG G+K
Sbjct: 4 VAVYNTRGERVGEIELSETVFGAPVREALMHQAVVRYLANQRRGTAATKTRGMVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R P +R G + GP+PR ++ L KK RR L+ ALSA+ A+G++
Sbjct: 64 PWRQKGTGRARQGSIRAPHWRKGGIVFGPQPRDYSQALPKKARRAALRSALSAKVADGEL 123
>gi|19704965|ref|NP_602460.1| 50S ribosomal protein L4 [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296329219|ref|ZP_06871720.1| ribosomal protein L4/L1 family protein [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
gi|46577280|sp|Q8RIF6.1|RL4_FUSNN RecName: Full=50S ribosomal protein L4
gi|19712867|gb|AAL93759.1| LSU ribosomal protein L1E [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296153575|gb|EFG94392.1| ribosomal protein L4/L1 family protein [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
Length = 209
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 76/121 (62%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ + N E G + + VF + K ++H V+ +LA +QGT STKT + V G G+
Sbjct: 3 VLNIYNLAGEQTGTVEVNDAVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGR 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
KP++QKGTGRAR GT+R P GG GP PRS+ K+NKKVR L L+ ALSA+ A G
Sbjct: 63 KPFKQKGTGRARQGTIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSALSAKVAAGN 122
Query: 220 V 220
V
Sbjct: 123 V 123
>gi|319893199|ref|YP_004150074.1| 50S ribosomal protein L4p (L1e) [Staphylococcus pseudintermedius
HKU10-03]
gi|386318582|ref|YP_006014745.1| 50S ribosomal protein L4 [Staphylococcus pseudintermedius ED99]
gi|317162895|gb|ADV06438.1| LSU ribosomal protein L4p (L1e) [Staphylococcus pseudintermedius
HKU10-03]
gi|323463753|gb|ADX75906.1| ribosomal protein L4 [Staphylococcus pseudintermedius ED99]
Length = 207
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 79/133 (59%), Gaps = 2/133 (1%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + D++ + Q A +QGTH+ K S V G G+KPWRQKGTGRAR
Sbjct: 15 GTVELSDSVFGIEPNNDVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG--KVSLSVSLSLF 229
GT+R PQ+RGG + GP PRS+ K+ KK+RRL L+ ALS + E K+ S +L
Sbjct: 75 QGTIRAPQWRGGGIVFGPTPRSYGYKMPKKMRRLALRSALSYKVQENGFKIVDSFNLEAP 134
Query: 230 LRPSFSLSLKNTD 242
F +L N +
Sbjct: 135 KTKEFKTTLTNLE 147
>gi|167645579|ref|YP_001683242.1| 50S ribosomal protein L4 [Caulobacter sp. K31]
gi|189029494|sp|B0T2C3.1|RL4_CAUSK RecName: Full=50S ribosomal protein L4
gi|167348009|gb|ABZ70744.1| ribosomal protein L4/L1e [Caulobacter sp. K31]
Length = 212
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
+ V N G + L +F + IR DI+ RVV WQLAKR+ G H + +EVS TGK
Sbjct: 3 LDVINLDGGKAGSVDLDDAIFGIADIRGDILQRVVTWQLAKRRSGNHKIQVRNEVSRTGK 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
K ++QKGTG ARHG+ R QF GG HGP RSHA L KK+R + L+ ALS++A G
Sbjct: 63 KMYKQKGTGSARHGSRRAAQFVGGAKAHGPVVRSHAFDLPKKIRAMALRHALSSKAKSGS 122
Query: 220 V 220
+
Sbjct: 123 I 123
>gi|347751592|ref|YP_004859157.1| 50S ribosomal protein L4 [Bacillus coagulans 36D1]
gi|347584110|gb|AEP00377.1| ribosomal protein L4/L1e [Bacillus coagulans 36D1]
Length = 207
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + + ++ + Q A +QGTH K SEV G
Sbjct: 1 MPKVALYNQNGSQVGEVELNDAVFGIEPNEHVLFEAIIMQRASLRQGTHKVKGRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG T+ GP PRS++ KL KKVRRL +K ALS++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRAPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVRE 120
Query: 218 GKV 220
+
Sbjct: 121 NNI 123
>gi|134103263|ref|YP_001108924.1| 50S ribosomal protein L4 [Saccharopolyspora erythraea NRRL 2338]
gi|291007944|ref|ZP_06565917.1| 50S ribosomal protein L4 [Saccharopolyspora erythraea NRRL 2338]
gi|166990952|sp|A4FPM4.1|RL4_SACEN RecName: Full=50S ribosomal protein L4
gi|133915886|emb|CAM05999.1| 50S ribosomal protein L4 [Saccharopolyspora erythraea NRRL 2338]
Length = 228
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 77/111 (69%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FDV ++H+VV QLA +QGTH+TKT +VSG GKKP+RQKGTG AR
Sbjct: 16 GTVELPAEIFDVQANIALMHQVVVAQLAAGRQGTHATKTRGQVSGGGKKPYRQKGTGNAR 75
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
G++R PQF GG T+HGP+PR ++ + KK++ L+ ALS R G++ +
Sbjct: 76 QGSIRAPQFTGGGTVHGPQPRDYSQRTPKKMKVAALRGALSDRVRAGQLHV 126
>gi|16125498|ref|NP_420062.1| 50S ribosomal protein L4 [Caulobacter crescentus CB15]
gi|221234244|ref|YP_002516680.1| 50S ribosomal protein L4 [Caulobacter crescentus NA1000]
gi|46577288|sp|Q9A8V2.1|RL4_CAUCR RecName: Full=50S ribosomal protein L4
gi|254803724|sp|B8H4D5.1|RL4_CAUCN RecName: Full=50S ribosomal protein L4
gi|13422580|gb|AAK23230.1| ribosomal protein L4 [Caulobacter crescentus CB15]
gi|220963416|gb|ACL94772.1| LSU ribosomal protein L1E-L4P [Caulobacter crescentus NA1000]
Length = 212
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 78/125 (62%), Gaps = 7/125 (5%)
Query: 124 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGG 183
IR DI+ RVV WQLAKR+ G H + +EVS T KK ++QKGTG ARHG+ R QF GG
Sbjct: 27 EIRGDILQRVVTWQLAKRRSGNHKIQVRNEVSRTSKKMYKQKGTGGARHGSRRAAQFVGG 86
Query: 184 TTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG------KVSLSVSLSLFLRPSFS-L 236
HGP RSHA L KK+R L L+ ALS++A G V+L+ + + LR +F +
Sbjct: 87 AKAHGPVVRSHAFDLPKKIRALALRHALSSKAKAGSLVVVDSVALTEAKTAALRATFDKI 146
Query: 237 SLKNT 241
LKN
Sbjct: 147 GLKNA 151
>gi|390934122|ref|YP_006391627.1| 50S ribosomal protein L4 [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569623|gb|AFK86028.1| ribosomal protein L4/L1e [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 206
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 76/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L+ +VF V + ++H V LA ++QGTHSTK EV G G K
Sbjct: 4 VAVYNINAEQIGEIELSDNVFGVEVNVPVMHEAVLNYLANQRQGTHSTKRRGEVRGGGIK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTGRAR G++R PQ+ G + GPKPR ++ + KKV+RL LK ALS++ + +
Sbjct: 64 PWRQKGTGRARQGSIRAPQWVKGGVVFGPKPRDYSYNIPKKVKRLALKSALSSKVRDNE 122
>gi|333896189|ref|YP_004470063.1| 50S ribosomal protein L4 [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333111454|gb|AEF16391.1| ribosomal protein L4/L1e [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 206
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 76/119 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L+ +VF V + ++H V LA ++QGTHSTK EV G G K
Sbjct: 4 VAVYNINAEQIGEIELSDNVFGVEVNVPVMHEAVLNYLANQRQGTHSTKRRGEVRGGGIK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTGRAR G++R PQ+ G + GPKPR ++ + KKV+RL LK ALS++ + +
Sbjct: 64 PWRQKGTGRARQGSIRAPQWVKGGVVFGPKPRDYSYNIPKKVKRLALKSALSSKVRDNE 122
>gi|237821420|ref|ZP_04597265.1| 50S ribosomal protein L4 [Streptococcus pneumoniae CCRI 1974M2]
Length = 207
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 73/111 (65%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
++ G +VL+ VF + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGT
Sbjct: 12 KEAGQVVLSDAVFGIEPNESVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTR 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
RAR G++R PQ+RGG + GP PRS+ KL +KVRRL LK S + AE K
Sbjct: 72 RARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSEKVAENK 122
>gi|16077185|ref|NP_387998.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
168]
gi|221307929|ref|ZP_03589776.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
168]
gi|221312250|ref|ZP_03594055.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317184|ref|ZP_03598478.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321447|ref|ZP_03602741.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
SMY]
gi|321313788|ref|YP_004206075.1| 50S ribosomal protein L4 [Bacillus subtilis BSn5]
gi|384173777|ref|YP_005555162.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|402774359|ref|YP_006628303.1| 50S ribosomal protein L4 [Bacillus subtilis QB928]
gi|428277533|ref|YP_005559268.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. natto BEST195]
gi|452916571|ref|ZP_21965193.1| 50S ribosomal protein L4 [Bacillus subtilis MB73/2]
gi|1173050|sp|P42921.1|RL4_BACSU RecName: Full=50S ribosomal protein L4
gi|786154|dbj|BAA08832.1| ribosomal protein L4 [Bacillus subtilis]
gi|1165304|gb|AAC45957.1| L4 [Bacillus subtilis]
gi|2632384|emb|CAB11893.1| ribosomal protein L4 [Bacillus subtilis subsp. subtilis str. 168]
gi|291482490|dbj|BAI83565.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. natto BEST195]
gi|320020062|gb|ADV95048.1| 50S ribosomal protein L4 [Bacillus subtilis BSn5]
gi|349593001|gb|AEP89188.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|402479545|gb|AFQ56054.1| Ribosomal protein L4 [Bacillus subtilis QB928]
gi|407955807|dbj|BAM49047.1| 50S ribosomal protein L4 [Bacillus subtilis BEST7613]
gi|407963078|dbj|BAM56317.1| 50S ribosomal protein L4 [Bacillus subtilis BEST7003]
gi|452114480|gb|EME04880.1| 50S ribosomal protein L4 [Bacillus subtilis MB73/2]
Length = 207
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + + ++ + Q A +QGTH K SEV G
Sbjct: 1 MPKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS++ +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVID 120
Query: 218 GKVSLSVSLSL 228
+ + L+L
Sbjct: 121 NNIIVLEDLTL 131
>gi|257431697|ref|ZP_05608060.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
E1410]
gi|257282576|gb|EEV12708.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
E1410]
Length = 207
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 73/111 (65%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + ++ + Q A +QGTH+ K S VSG G+KPW+QKGTGRAR
Sbjct: 15 GSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPWKQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
GT+R PQ+RGG + GP PRS+A K+ KK+RRL L+ ALS + E ++L
Sbjct: 75 QGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENGLTL 125
>gi|337290016|ref|YP_004629037.1| 50S ribosomal protein L4 [Corynebacterium ulcerans BR-AD22]
gi|384514938|ref|YP_005710030.1| 50S ribosomal protein L4 [Corynebacterium ulcerans 809]
gi|397653195|ref|YP_006493878.1| 50S ribosomal protein L4 [Corynebacterium ulcerans 0102]
gi|334696139|gb|AEG80936.1| 50S ribosomal protein L4 [Corynebacterium ulcerans 809]
gi|334698322|gb|AEG83118.1| 50S ribosomal protein L4 [Corynebacterium ulcerans BR-AD22]
gi|393402151|dbj|BAM26643.1| 50S ribosomal protein L4 [Corynebacterium ulcerans 0102]
Length = 217
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 83/136 (61%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L ++FD ++H+VV QLA ++QGTHSTKT +EVSG
Sbjct: 3 NLKLDVLTAEGKTDGQVELPAEIFDREASVALMHQVVNAQLAAKRQGTHSTKTRAEVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KP+RQKGTGRAR G++R P F GG HGPKPR ++ + KK+ + L ALS RA
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPHFTGGGISHGPKPRDYSQRTPKKMIKAALYGALSDRARH 122
Query: 218 GKVSLSVSLSLFLRPS 233
++ + L PS
Sbjct: 123 ERIHVITELVAGQTPS 138
>gi|182412050|ref|YP_001817116.1| 50S ribosomal protein L4 [Opitutus terrae PB90-1]
gi|177839264|gb|ACB73516.1| ribosomal protein L4/L1e [Opitutus terrae PB90-1]
Length = 210
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 83/141 (58%), Gaps = 17/141 (12%)
Query: 82 LKKTVLTPDITIGLHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKR 141
+K TV +PD T QD +P F DKG + K++I + A
Sbjct: 1 MKLTVFSPDATKSTEQDFTLPT---FEGDKGLQAV----------KEVIVAIN----ANN 43
Query: 142 QQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKK 201
+QGTHSTKT EV G GKKPWRQKGTGRAR G++R P + GG + GPKPR ++ K+N K
Sbjct: 44 RQGTHSTKTRGEVRGGGKKPWRQKGTGRARAGSIRSPLWGGGGVVFGPKPRDYSKKINAK 103
Query: 202 VRRLGLKIALSARAAEGKVSL 222
V++L AL RA+ G++++
Sbjct: 104 VKQLAFSRALFDRASAGEIAV 124
>gi|296333114|ref|ZP_06875568.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672816|ref|YP_003864487.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. spizizenii str.
W23]
gi|350264216|ref|YP_004875523.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|386756697|ref|YP_006229913.1| 50S ribosomal protein L4 [Bacillus sp. JS]
gi|296149730|gb|EFG90625.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411059|gb|ADM36177.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. spizizenii str.
W23]
gi|349597103|gb|AEP84891.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|384929979|gb|AFI26657.1| 50S ribosomal protein L4 [Bacillus sp. JS]
Length = 207
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L VF + + ++ + Q A +QGTH K SEV G
Sbjct: 1 MPKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS++ +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVND 120
Query: 218 GKVSLSVSLSL 228
+ + L+L
Sbjct: 121 NNIIVLEDLTL 131
>gi|433456017|ref|ZP_20414079.1| 50S ribosomal protein L4 [Arthrobacter crystallopoietes BAB-32]
gi|432196799|gb|ELK53224.1| 50S ribosomal protein L4 [Arthrobacter crystallopoietes BAB-32]
Length = 205
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 78/118 (66%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGTH TKT +EVSG G+KP++QKGTGRAR G++
Sbjct: 9 LPAEIFDVQTNVPLLHQVVVAQLAAARQGTHKTKTRAEVSGAGRKPFKQKGTGRARQGSI 68
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPS 233
R P GG +HGP PR ++ + KK++ L+ ALS RA G++ + +L +PS
Sbjct: 69 RAPHMTGGGVVHGPTPRDYSQRTPKKMKAAALRGALSDRARNGRIHVLDALVSGEKPS 126
>gi|23097575|ref|NP_691041.1| 50S ribosomal protein L4 [Oceanobacillus iheyensis HTE831]
gi|46577267|sp|Q8ETY1.1|RL4_OCEIH RecName: Full=50S ribosomal protein L4
gi|22775798|dbj|BAC12076.1| 50S ribosomal protein L4 [Oceanobacillus iheyensis HTE831]
Length = 207
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 82/140 (58%), Gaps = 8/140 (5%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VF + ++H V Q A +QGTH+ K SEV G G+KPWRQKGTGRAR
Sbjct: 15 GDIELNDSVFGIEPNTHVLHEAVVMQRASLRQGTHAVKNRSEVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLR 231
G+ R PQ+ GG T+ GP PRS++ KL KKVRRL L+ ALS++ E SL +
Sbjct: 75 QGSTRSPQWVGGGTVFGPTPRSYSYKLPKKVRRLALRSALSSKVNEE--------SLLVL 126
Query: 232 PSFSLSLKNTDTHVHIVSSI 251
+ S+ T V+I+ +
Sbjct: 127 ENISIDAPKTKEIVNILKGL 146
>gi|259500893|ref|ZP_05743795.1| 50S ribosomal protein L4 [Lactobacillus iners DSM 13335]
gi|302190654|ref|ZP_07266908.1| 50S ribosomal protein L4 [Lactobacillus iners AB-1]
gi|309803686|ref|ZP_07697776.1| 50S ribosomal protein L4 [Lactobacillus iners LactinV 11V1-d]
gi|309804951|ref|ZP_07699009.1| 50S ribosomal protein L4 [Lactobacillus iners LactinV 09V1-c]
gi|309806704|ref|ZP_07700699.1| 50S ribosomal protein L4 [Lactobacillus iners LactinV 03V1-b]
gi|309808465|ref|ZP_07702364.1| 50S ribosomal protein L4 [Lactobacillus iners LactinV 01V1-a]
gi|309809135|ref|ZP_07703008.1| 50S ribosomal protein L4 [Lactobacillus iners SPIN 2503V10-D]
gi|312871314|ref|ZP_07731412.1| 50S ribosomal protein L4 [Lactobacillus iners LEAF 3008A-a]
gi|312872623|ref|ZP_07732688.1| 50S ribosomal protein L4 [Lactobacillus iners LEAF 2062A-h1]
gi|312874014|ref|ZP_07734049.1| 50S ribosomal protein L4 [Lactobacillus iners LEAF 2052A-d]
gi|312874786|ref|ZP_07734805.1| 50S ribosomal protein L4 [Lactobacillus iners LEAF 2053A-b]
gi|315654025|ref|ZP_07906941.1| 50S ribosomal protein L4 [Lactobacillus iners ATCC 55195]
gi|325912358|ref|ZP_08174754.1| 50S ribosomal protein L4 [Lactobacillus iners UPII 143-D]
gi|325913218|ref|ZP_08175587.1| 50S ribosomal protein L4 [Lactobacillus iners UPII 60-B]
gi|329920653|ref|ZP_08277340.1| 50S ribosomal protein L4 [Lactobacillus iners SPIN 1401G]
gi|349611927|ref|ZP_08891157.1| 50S ribosomal protein L4 [Lactobacillus sp. 7_1_47FAA]
gi|259167587|gb|EEW52082.1| 50S ribosomal protein L4 [Lactobacillus iners DSM 13335]
gi|308164284|gb|EFO66541.1| 50S ribosomal protein L4 [Lactobacillus iners LactinV 11V1-d]
gi|308165711|gb|EFO67936.1| 50S ribosomal protein L4 [Lactobacillus iners LactinV 09V1-c]
gi|308166884|gb|EFO69068.1| 50S ribosomal protein L4 [Lactobacillus iners LactinV 03V1-b]
gi|308168293|gb|EFO70412.1| 50S ribosomal protein L4 [Lactobacillus iners LactinV 01V1-a]
gi|308170580|gb|EFO72600.1| 50S ribosomal protein L4 [Lactobacillus iners SPIN 2503V10-D]
gi|311089531|gb|EFQ47956.1| 50S ribosomal protein L4 [Lactobacillus iners LEAF 2053A-b]
gi|311090354|gb|EFQ48763.1| 50S ribosomal protein L4 [Lactobacillus iners LEAF 2052A-d]
gi|311091665|gb|EFQ50044.1| 50S ribosomal protein L4 [Lactobacillus iners LEAF 2062A-h1]
gi|311093328|gb|EFQ51674.1| 50S ribosomal protein L4 [Lactobacillus iners LEAF 3008A-a]
gi|315488721|gb|EFU78367.1| 50S ribosomal protein L4 [Lactobacillus iners ATCC 55195]
gi|325475829|gb|EGC78999.1| 50S ribosomal protein L4 [Lactobacillus iners UPII 143-D]
gi|325477482|gb|EGC80625.1| 50S ribosomal protein L4 [Lactobacillus iners UPII 60-B]
gi|328935911|gb|EGG32371.1| 50S ribosomal protein L4 [Lactobacillus iners SPIN 1401G]
gi|348608392|gb|EGY58377.1| 50S ribosomal protein L4 [Lactobacillus sp. 7_1_47FAA]
Length = 204
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 82/130 (63%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I V + + G + L +F+V ++ + Q A ++QGTH+TK S VSG G
Sbjct: 1 MAIKVIDQKGKSVGEVDLNKCIFEVEPNDSVVFEAIIRQRAGKRQGTHATKNRSAVSGGG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKPW+QKGTGRAR G++R PQ+RGG T+ GP PRS+ + + +K RRL +K LS + A+G
Sbjct: 61 KKPWKQKGTGRARQGSIRAPQWRGGGTVFGPTPRSYKVDMPRKARRLAIKSVLSQKVADG 120
Query: 219 KVSLSVSLSL 228
+ + L+L
Sbjct: 121 NLIVLDQLTL 130
>gi|209528358|ref|ZP_03276809.1| ribosomal protein L4/L1e [Arthrospira maxima CS-328]
gi|376007826|ref|ZP_09785011.1| 50S ribosomal subunit protein L4 [Arthrospira sp. PCC 8005]
gi|423062933|ref|ZP_17051723.1| ribosomal protein L4/L1e [Arthrospira platensis C1]
gi|209491211|gb|EDZ91615.1| ribosomal protein L4/L1e [Arthrospira maxima CS-328]
gi|375323802|emb|CCE20764.1| 50S ribosomal subunit protein L4 [Arthrospira sp. PCC 8005]
gi|406715512|gb|EKD10666.1| ribosomal protein L4/L1e [Arthrospira platensis C1]
Length = 210
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 74/115 (64%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
+ N+ E+ G L V I+HR + Q A +QGT STKT SEV G G+KPW
Sbjct: 6 IRNWEGEEVGQTTLELKVAKEENASHIVHRALVRQQAAARQGTASTKTRSEVRGGGRKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
RQKGTGRAR G++R P +RGG + GPKPR +++K+N+K RRL L+ A +RA +
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYSVKMNRKERRLALRTAFQSRAED 120
>gi|284034001|ref|YP_003383932.1| 50S ribosomal protein L4/L1e [Kribbella flavida DSM 17836]
gi|283813294|gb|ADB35133.1| ribosomal protein L4/L1e [Kribbella flavida DSM 17836]
Length = 237
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 73/109 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G L ++FDV + +IH+VV QLA +QGTH K+ EVSG G KP+RQKGTGRAR
Sbjct: 18 GSAELPAELFDVQVNIPLIHQVVVAQLAAARQGTHKVKSRGEVSGGGAKPYRQKGTGRAR 77
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
G+ R PQF GG +HGP PR+++ + KK+ L+ ALS RA +G+V
Sbjct: 78 QGSTRAPQFTGGGVVHGPTPRNYSQRTPKKMIAAALRGALSDRARDGRV 126
>gi|358459776|ref|ZP_09169970.1| ribosomal protein L4/L1e [Frankia sp. CN3]
gi|357076965|gb|EHI86430.1| ribosomal protein L4/L1e [Frankia sp. CN3]
Length = 230
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 89/146 (60%), Gaps = 5/146 (3%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G L G++FDV + +IH+VV Q A +QGTH TKT EV G GKKP+RQKGTGR
Sbjct: 25 EAGTAELPGEIFDVQVNVPLIHQVVVAQQAAARQGTHDTKTRGEVRGGGKKPYRQKGTGR 84
Query: 170 ARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLF 229
AR G+ R PQF GG T+HGP PR++ + KK++ L+ ALS RA +V + SL+
Sbjct: 85 ARQGSTRAPQFAGGGTVHGPTPRNYEQRTPKKMKAAALRGALSDRARANRVHVVSSLAEG 144
Query: 230 LRPS-----FSLSLKNTDTHVHIVSS 250
PS +LS + HV +V+
Sbjct: 145 ETPSTKAAITALSTLASSRHVLVVAE 170
>gi|315640160|ref|ZP_07895282.1| 50S ribosomal protein L4 [Enterococcus italicus DSM 15952]
gi|315484137|gb|EFU74611.1| 50S ribosomal protein L4 [Enterococcus italicus DSM 15952]
Length = 207
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L ++F + + ++ + Q A +QGTH+ K S V G
Sbjct: 1 MPNVALFKQDGSQNGEITLNEEIFGIEPNESVVFDAIIMQRASLRQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS + A
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSEKVAS 120
Query: 218 GKVSLSVSLSL 228
+ +LS
Sbjct: 121 NNLVAVEALSF 131
>gi|302336381|ref|YP_003801588.1| 50S ribosomal protein L4 [Olsenella uli DSM 7084]
gi|301320221|gb|ADK68708.1| LSU ribosomal protein L4P [Olsenella uli DSM 7084]
Length = 208
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + G + L+ VF + ++H+VV A +QGTHSTK S VSG G K
Sbjct: 4 IEVKNVEGKAAGEVELSDSVFGITPNIPVMHQVVVAYEASMRQGTHSTKNRSSVSGGGAK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR GT+R PQ+ GG + GP PRSHA ++N K ++L ++ ALS + A+ ++
Sbjct: 64 PYRQKGTGRARQGTIRAPQWVGGGVVFGPTPRSHAKRVNNKEKKLAMRSALSGKLADSEL 123
Query: 221 SLSVSLSLFLRPSFSLSL 238
L L F P L++
Sbjct: 124 ILVDEL-YFKEPKTKLAV 140
>gi|254438218|ref|ZP_05051712.1| ribosomal protein L4/L1 family [Octadecabacter antarcticus 307]
gi|198253664|gb|EDY77978.1| ribosomal protein L4/L1 family [Octadecabacter antarcticus 307]
Length = 205
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 74/117 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F + R DI+HRVVRWQ Q GTH KT SEV + KK +RQKGTG AR
Sbjct: 14 GSVELDEAIFGLEPRIDILHRVVRWQRNNAQAGTHKVKTRSEVKYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
HG P FRGG GP PRSH +L KK R+LGL+ ALSA+ A G++ + ++ +
Sbjct: 74 HGARSAPIFRGGGIYKGPTPRSHGHELTKKFRKLGLRHALSAKVAAGELVIVDNIDI 130
>gi|291549415|emb|CBL25677.1| LSU ribosomal protein L4P [Ruminococcus torques L2-14]
Length = 206
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 73/119 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L VF V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVDTIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PR ++ K+NKK +R LK AL++R E K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPVPRDYSFKMNKKEKRAALKSALTSRVEENK 122
>gi|296111430|ref|YP_003621812.1| 50S ribosomal protein L4 [Leuconostoc kimchii IMSNU 11154]
gi|339491299|ref|YP_004705804.1| 50S ribosomal protein L4 [Leuconostoc sp. C2]
gi|295832962|gb|ADG40843.1| 50S ribosomal protein L4 [Leuconostoc kimchii IMSNU 11154]
gi|338852971|gb|AEJ31181.1| 50S ribosomal protein L4 [Leuconostoc sp. C2]
Length = 207
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 72/109 (66%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VF + +I V Q A +QGTH+ K S VSG G+KPW+QKGTGRAR G++R PQ
Sbjct: 23 VFAIEPNNTVITDAVLMQRASMRQGTHAVKNRSAVSGGGRKPWKQKGTGRARAGSIREPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
FRGG + GP PRS+A ++N+K +L LK LS + AEGK+ + +L+
Sbjct: 83 FRGGGIVFGPSPRSYAYRINRKAYQLALKSVLSQKVAEGKLVVVDALTF 131
>gi|225574701|ref|ZP_03783311.1| hypothetical protein RUMHYD_02778 [Blautia hydrogenotrophica DSM
10507]
gi|225038091|gb|EEG48337.1| 50S ribosomal protein L4 [Blautia hydrogenotrophica DSM 10507]
Length = 206
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 75/120 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N + G + L VF V I + ++H V QLA ++QGT KT SEV G G+K
Sbjct: 4 VSVLNMEGNEVGTIELNDAVFGVEINEHLVHLAVVRQLANKRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G++R PQ+ GG + P PR +++K+N+K R LK AL+A+ + K+
Sbjct: 64 PWRQKGTGHARQGSIRAPQWTGGGVVFAPVPRDYSVKMNRKERLAALKSALTAKVQDNKL 123
>gi|359777764|ref|ZP_09281040.1| 50S ribosomal protein L4 [Arthrobacter globiformis NBRC 12137]
gi|359304910|dbj|GAB14869.1| 50S ribosomal protein L4 [Arthrobacter globiformis NBRC 12137]
Length = 206
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 78/123 (63%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGTH TKT +EVSG G+KP++QKGTGRAR G++
Sbjct: 9 LPAEIFDVQTNVPLLHQVVVAQLAAARQGTHKTKTRAEVSGAGRKPFKQKGTGRARQGSI 68
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS 235
R P GG +HGP PR ++ + KK+ L+ ALS RA G+V + L +PS
Sbjct: 69 RAPHMTGGGVVHGPTPRDYSQRTPKKMIAAALRGALSDRARNGRVHVVSELVAGDKPSSK 128
Query: 236 LSL 238
+L
Sbjct: 129 AAL 131
>gi|329117498|ref|ZP_08246215.1| 50S ribosomal protein L4 [Streptococcus parauberis NCFD 2020]
gi|333904298|ref|YP_004478169.1| 50S ribosomal protein L4 [Streptococcus parauberis KCTC 11537]
gi|326907903|gb|EGE54817.1| 50S ribosomal protein L4 [Streptococcus parauberis NCFD 2020]
gi|333119563|gb|AEF24497.1| 50S ribosomal protein L4 [Streptococcus parauberis KCTC 11537]
gi|456369968|gb|EMF48867.1| LSU ribosomal protein L4p (L1e) [Streptococcus parauberis
KRS-02109]
gi|457093884|gb|EMG24445.1| LSU ribosomal protein L4p (L1e) [Streptococcus parauberis
KRS-02083]
Length = 207
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 71/109 (65%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + + ++ VV Q A +QGTH+ K S VSG G+KPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
+RGG + GP PRS+ KL +KVRRL LK SA+ A+ K SLS
Sbjct: 83 WRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEKFVAVESLSF 131
>gi|297703540|ref|XP_002828694.1| PREDICTED: 39S ribosomal protein L4, mitochondrial [Pongo abelii]
Length = 311
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 93/178 (52%), Gaps = 2/178 (1%)
Query: 52 SGLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDK 111
GLS LA T + P +L K + P + Q V + F E
Sbjct: 19 QGLSSLAEEAARPTENPEQVANEGLPEPVLRKVELPVPAHRRPV-QAWVESLRGFEQERV 77
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G L DVF + R DI+H+V WQ ++ TKT +EV G G+KPW QKGTGRAR
Sbjct: 78 GLADLHPDVFAIAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRAR 137
Query: 172 HGTLRGPQFRGGTTMHGPK-PRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
HG++R P +RGG HGP+ P S+ L KVR LGLK+AL+ + A+ + + SL L
Sbjct: 138 HGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKMALTVKLAQDDLHIMDSLEL 195
>gi|418049931|ref|ZP_12688018.1| ribosomal protein L4/L1e [Mycobacterium rhodesiae JS60]
gi|353190836|gb|EHB56346.1| ribosomal protein L4/L1e [Mycobacterium rhodesiae JS60]
Length = 219
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 77/117 (65%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L I V + G + L +FDV ++H+VV QLA ++QGTH+TKT ++VSG G
Sbjct: 3 LKIDVLTPGGKKDGTVELPAALFDVEPNIALMHQVVTAQLAAKRQGTHATKTRAQVSGGG 62
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA 215
KKP+RQKGTGRAR G+ R PQF GG +HGP+PR ++ + KK+ L+ ALS RA
Sbjct: 63 KKPYRQKGTGRARQGSTRAPQFTGGGVVHGPQPRDYSQRTPKKMIAAALRSALSDRA 119
>gi|227871801|ref|ZP_03990205.1| ribosomal protein L4 [Oribacterium sinus F0268]
gi|227842364|gb|EEJ52590.1| ribosomal protein L4 [Oribacterium sinus F0268]
Length = 206
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 74/120 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G M L +F P+ + ++H V QLA ++QGT T +EVSG G+K
Sbjct: 4 VSVFNMQGKEVGKMDLNDAIFAAPVHEHLLHLAVVAQLANKRQGTQKALTRAEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G++R PQ++GG + P PR + +NKK +R LK ALS AE K+
Sbjct: 64 PWRQKGTGHARQGSIRAPQWKGGGVVFAPTPRDYTTGMNKKEKRAALKSALSNAVAENKL 123
>gi|408828968|ref|ZP_11213858.1| 50S ribosomal protein L4 [Streptomyces somaliensis DSM 40738]
Length = 220
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 78/129 (60%), Gaps = 11/129 (8%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L ++FD +IH+VV QLA +QGTH TKT EV G GKKP+RQKGTGRAR
Sbjct: 15 GTVELPAEIFDAKTSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKKPYRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA-----------AEGKV 220
G+ R PQF GG +HGP PR ++ + KK++ L+ ALS RA EG++
Sbjct: 75 QGSTRAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRGALSDRARHSRVHVVTGVVEGEI 134
Query: 221 SLSVSLSLF 229
S + +LF
Sbjct: 135 STKAAKTLF 143
>gi|389694571|ref|ZP_10182665.1| 50S ribosomal protein L4, bacterial/organelle [Microvirga sp.
WSM3557]
gi|388587957|gb|EIM28250.1| 50S ribosomal protein L4, bacterial/organelle [Microvirga sp.
WSM3557]
Length = 206
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 74/117 (63%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ +T + G + L +F + R D++ R VRWQLAKRQ GTH+ K S++ T KK
Sbjct: 3 LDITTLEGGNAGSVDLNETIFGLEPRADLLARCVRWQLAKRQAGTHAVKNRSDIDRTTKK 62
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
++QKGTG ARHG PQFRGG GP+ RSHA L KKVR L LK ALS++A +
Sbjct: 63 VYKQKGTGSARHGAASAPQFRGGGRAFGPQVRSHAHDLPKKVRALALKHALSSKAKD 119
>gi|410929341|ref|XP_003978058.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Takifugu
rubripes]
Length = 302
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 102/194 (52%), Gaps = 29/194 (14%)
Query: 60 RKFSTTILTPDSSEGAFPSDLLLKKTVLTP--------------------DITIGLH--- 96
++F++T+ + E A P++LLL ++ P D I H
Sbjct: 15 QRFASTL----AGESALPTNLLLPTNLVDPARLKRPSPPADCPLPVLRKCDAAIPAHLSH 70
Query: 97 -QDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVS 155
Q V + +E G L DVF VP R DI+H V WQ ++ TK SEV
Sbjct: 71 IQTWVETLEKEDSEPLGLAHLHPDVFAVPPRLDILHMVEIWQRNFKRISHAHTKVRSEVR 130
Query: 156 GTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPK-PRSHAIKLNKKVRRLGLKIALSAR 214
G GKKPWRQKG+GRARHG++R P +RGG HGP+ P S+ L KVR GLK+ALS++
Sbjct: 131 GGGKKPWRQKGSGRARHGSIRSPLWRGGGVSHGPRGPTSYYYMLPMKVRVQGLKVALSSK 190
Query: 215 AAEGKVSLSVSLSL 228
++ + + SL++
Sbjct: 191 MSQSYLHVVDSLAI 204
>gi|359773384|ref|ZP_09276781.1| 50S ribosomal protein L4 [Gordonia effusa NBRC 100432]
gi|359309509|dbj|GAB19559.1| 50S ribosomal protein L4 [Gordonia effusa NBRC 100432]
Length = 220
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 77/123 (62%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L ++FD ++H+VV Q A +QGTHSTKT EVSG
Sbjct: 8 NLTLDVKTVDGKTNGTVELPAEIFDATANIALMHQVVIAQQAAARQGTHSTKTRGEVSGG 67
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G KP+RQKGTGRAR G+ R PQF GG +HGP+PR ++ + KK++ L+ ALS RA
Sbjct: 68 GAKPYRQKGTGRARQGSTRAPQFAGGGVVHGPQPRDYSQRTPKKMKAAALRGALSDRARN 127
Query: 218 GKV 220
++
Sbjct: 128 DRI 130
>gi|386712467|ref|YP_006178789.1| 50S ribosomal protein L4 [Halobacillus halophilus DSM 2266]
gi|384072022|emb|CCG43512.1| 50S ribosomal protein L4 [Halobacillus halophilus DSM 2266]
Length = 207
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 78/128 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N + G + L VF + ++H V Q A +QGTH K SEVSG G+K
Sbjct: 4 VALLNQSGSNVGDVELNDAVFGIEPNTHVLHETVLMQRANLRQGTHKVKGRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R PQ+ GG + GP PRS++ + KKVRRL L+ A S++ E +
Sbjct: 64 PWRQKGTGRARQGSIRAPQWVGGGAVFGPSPRSYSYTMPKKVRRLALQSAYSSKVKEENI 123
Query: 221 SLSVSLSL 228
+ SLSL
Sbjct: 124 IVLESLSL 131
>gi|422933529|ref|ZP_16966449.1| 50S ribosomal protein L4 [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
gi|339891570|gb|EGQ80531.1| 50S ribosomal protein L4 [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
Length = 209
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 76/121 (62%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ + N E G + + VF + K ++H V+ +LA +QGT STKT + V G G+
Sbjct: 3 VLNIYNLAGEQTGTVEVNDAVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGR 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
KP++QKGTGRAR GT+R P GG GP PRS+ K+NKKVR L L+ ALSA+ A G
Sbjct: 63 KPFKQKGTGRARQGTIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSALSAKVAAGN 122
Query: 220 V 220
+
Sbjct: 123 I 123
>gi|237743900|ref|ZP_04574381.1| LSU ribosomal protein L1E [Fusobacterium sp. 7_1]
gi|260495202|ref|ZP_05815330.1| ribosomal protein L4/L1 [Fusobacterium sp. 3_1_33]
gi|289765451|ref|ZP_06524829.1| LSU ribosomal protein L1E [Fusobacterium sp. D11]
gi|336400121|ref|ZP_08580909.1| 50S ribosomal protein L4 [Fusobacterium sp. 21_1A]
gi|423138098|ref|ZP_17125741.1| 50S ribosomal protein L4 [Fusobacterium nucleatum subsp. animalis
F0419]
gi|229432931|gb|EEO43143.1| LSU ribosomal protein L1E [Fusobacterium sp. 7_1]
gi|260197259|gb|EEW94778.1| ribosomal protein L4/L1 [Fusobacterium sp. 3_1_33]
gi|289717006|gb|EFD81018.1| LSU ribosomal protein L1E [Fusobacterium sp. D11]
gi|336163318|gb|EGN66250.1| 50S ribosomal protein L4 [Fusobacterium sp. 21_1A]
gi|371958660|gb|EHO76369.1| 50S ribosomal protein L4 [Fusobacterium nucleatum subsp. animalis
F0419]
Length = 209
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 76/121 (62%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ + N E G + + VF + K ++H V+ +LA +QGT STKT + V G G+
Sbjct: 3 VLNIYNLAGEQTGTVEVNDAVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGR 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
KP++QKGTGRAR GT+R P GG GP PRS+ K+NKKVR L L+ ALSA+ A G
Sbjct: 63 KPFKQKGTGRARQGTIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSALSAKVAAGN 122
Query: 220 V 220
+
Sbjct: 123 I 123
>gi|358446884|ref|ZP_09157423.1| 50S ribosomal protein L4 [Corynebacterium casei UCMA 3821]
gi|356607208|emb|CCE55775.1| 50S ribosomal protein L4 [Corynebacterium casei UCMA 3821]
Length = 221
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L ++FD + ++H+VV QLA +QGTHSTKT EV G
Sbjct: 3 NLKLDVKTAEGKTNGSVELPAEIFDAEVSIALMHQVVNAQLAAARQGTHSTKTRGEVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KP+RQKGTGRAR G++R P + GG +HGPKPR +A + KK+ + L ALS RA
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPHYTGGGVVHGPKPRDYAQRTPKKMIKAALFGALSDRARN 122
Query: 218 GKVSLSVSLSLFLRPS 233
++ + L PS
Sbjct: 123 ERIHVIEELVAGQTPS 138
>gi|333398803|ref|ZP_08480616.1| 50S ribosomal protein L4 [Leuconostoc gelidum KCTC 3527]
gi|406600631|ref|YP_006745977.1| 50S ribosomal protein L4 [Leuconostoc gelidum JB7]
gi|406372166|gb|AFS41091.1| 50S ribosomal protein L4 [Leuconostoc gelidum JB7]
Length = 207
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 71/109 (65%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VF V +I V Q A +QGTH+ K S VSG G+KPW+QKGTGRAR G++R PQ
Sbjct: 23 VFAVEPNNAVITDAVLMQRASMRQGTHAVKNRSAVSGGGRKPWKQKGTGRARAGSIREPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
FRGG + GP PRS+A ++N+K +L LK LS + EGK+ + +LS
Sbjct: 83 FRGGGIVFGPSPRSYAYRINRKAYQLALKSVLSQKVTEGKLVVVDALSF 131
>gi|197303813|ref|ZP_03168849.1| hypothetical protein RUMLAC_02552 [Ruminococcus lactaris ATCC
29176]
gi|197297106|gb|EDY31670.1| 50S ribosomal protein L4 [Ruminococcus lactaris ATCC 29176]
Length = 206
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 73/119 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L VF V + + ++H V QLA +QGT KT SEVSG G+K
Sbjct: 4 VSVYNIEGKEVDTIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
PWRQKGTG AR G+ R PQ+ GG + P PR ++ K+NKK +R LK AL++R E K
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPVPRDYSFKMNKKEKRAALKSALTSRVEENK 122
>gi|300174030|ref|YP_003773196.1| 50S ribosomal protein L4 [Leuconostoc gasicomitatum LMG 18811]
gi|333448294|ref|ZP_08483236.1| 50S ribosomal protein L4 [Leuconostoc inhae KCTC 3774]
gi|299888409|emb|CBL92377.1| 50S ribosomal protein L4 [Leuconostoc gasicomitatum LMG 18811]
Length = 207
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 71/109 (65%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
VF V +I V Q A +QGTH+ K S VSG G+KPW+QKGTGRAR G++R PQ
Sbjct: 23 VFAVEPNNAVITDAVLMQRASMRQGTHAVKNRSAVSGGGRKPWKQKGTGRARAGSIREPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
FRGG + GP PRS+A ++N+K +L LK LS + EGK+ + +LS
Sbjct: 83 FRGGGIVFGPSPRSYAYRINRKAYQLALKSVLSQKVTEGKLVVVDALSF 131
>gi|282926795|ref|ZP_06334422.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A10102]
gi|282591246|gb|EFB96319.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A10102]
Length = 207
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 73/111 (65%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + ++ + Q A QGTH+ K S VSG G+KPW+QKGTGRAR
Sbjct: 15 GSIELSDAVFGIEPNNSVLFEAINLQRASLCQGTHAVKNRSAVSGGGRKPWKQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
GT+R PQ+RGG + GP PRS+A K+ KK+RRL L+ ALS +A E +++
Sbjct: 75 QGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKAQENGLTV 125
>gi|167755913|ref|ZP_02428040.1| hypothetical protein CLORAM_01433 [Clostridium ramosum DSM 1402]
gi|237733229|ref|ZP_04563710.1| 50S ribosomal protein L4 [Mollicutes bacterium D7]
gi|365832662|ref|ZP_09374190.1| 50S ribosomal protein L4 [Coprobacillus sp. 3_3_56FAA]
gi|374627898|ref|ZP_09700299.1| 50S ribosomal protein L4 [Coprobacillus sp. 8_2_54BFAA]
gi|167703905|gb|EDS18484.1| 50S ribosomal protein L4 [Clostridium ramosum DSM 1402]
gi|229383610|gb|EEO33701.1| 50S ribosomal protein L4 [Coprobacillus sp. D7]
gi|365260078|gb|EHM90049.1| 50S ribosomal protein L4 [Coprobacillus sp. 3_3_56FAA]
gi|373912949|gb|EHQ44793.1| 50S ribosomal protein L4 [Coprobacillus sp. 8_2_54BFAA]
Length = 207
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 72/116 (62%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V N + + L VF + K + +V Q A +QGTH K +EV G G
Sbjct: 2 LTVKVYNQEGSEVKDLELNEAVFGIEPNKQALFDMVLLQRASLRQGTHKVKNRTEVRGGG 61
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
KKPWRQKGTGRAR G++R PQ+RGG + GP PRS+ KLN+KVRRL LK ALS +
Sbjct: 62 KKPWRQKGTGRARQGSIRAPQWRGGGVVFGPTPRSYKFKLNRKVRRLALKSALSTK 117
>gi|295111421|emb|CBL28171.1| LSU ribosomal protein L4P [Synergistetes bacterium SGP1]
Length = 207
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 75/120 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V +F + G M L+ VF PI +H+VV LA +QGTH+ KT +VSG GKK
Sbjct: 4 IKVVDFSGQSAGEMELSEVVFGAPIHVAAMHQVVVAHLANCRQGTHAVKTRGDVSGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQK TGRAR G+ R P + G HGPK R ++ K+NKKVRRL L ALS + + ++
Sbjct: 64 PWRQKHTGRARQGSTRSPLWVHGGVAHGPKMRDYSQKVNKKVRRLALLSALSVKVRDAQM 123
>gi|153952862|ref|YP_001393627.1| 50S ribosomal protein L4 [Clostridium kluyveri DSM 555]
gi|219853527|ref|YP_002470649.1| hypothetical protein CKR_0184 [Clostridium kluyveri NBRC 12016]
gi|189029496|sp|A5N4P8.1|RL4_CLOK5 RecName: Full=50S ribosomal protein L4
gi|254803727|sp|B9DYB0.1|RL4_CLOK1 RecName: Full=50S ribosomal protein L4
gi|146345743|gb|EDK32279.1| RplD [Clostridium kluyveri DSM 555]
gi|219567251|dbj|BAH05235.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 206
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDKGFMV---LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P+ FN++ + L+ VF V + + ++H+VV LA ++QGT S KT +EVSG
Sbjct: 1 MPIVGLFNKEGQKITDFELSDKVFGVEVNQYVMHQVVVALLANKRQGTQSAKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G KPWRQKGTGRAR G++R PQ+ G + KPRS+ I + K RRL +K ALS++ E
Sbjct: 61 GIKPWRQKGTGRARQGSIRSPQWIHGGVVFAVKPRSYRISVPKSARRLAMKSALSSKVEE 120
Query: 218 GKVSLSVSLSL 228
++ + SL +
Sbjct: 121 NQIVVLESLEM 131
>gi|365128104|ref|ZP_09340420.1| 50S ribosomal protein L4 [Subdoligranulum sp. 4_3_54A2FAA]
gi|363623451|gb|EHL74570.1| 50S ribosomal protein L4 [Subdoligranulum sp. 4_3_54A2FAA]
Length = 207
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 72/105 (68%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L+ VF + + ++H V LA ++QGT STKT SEVSG G+KPWRQKGTGRAR G+
Sbjct: 19 LSDAVFGITPNEKVMHAAVVNFLANQRQGTQSTKTRSEVSGGGRKPWRQKGTGRARQGST 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
R PQ+ G GPKPR ++ +LNKKV+RL L ALS++A G +
Sbjct: 79 RSPQWTHGGVALGPKPRDYSYRLNKKVKRLALLSALSSKAQSGDI 123
>gi|365905476|ref|ZP_09443235.1| 50S ribosomal protein L4 [Lactobacillus versmoldensis KCTC 3814]
Length = 207
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 1/114 (0%)
Query: 120 VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
+F + +++ V Q A +QGTH K SEV G GKKPWRQKGTGRAR G++R PQ
Sbjct: 23 IFGIEPNNNVVTDAVIMQRATLRQGTHDVKNRSEVRGGGKKPWRQKGTGRARQGSIRSPQ 82
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPS 233
+ GG T+ GP PRS+A L +KV RL LK LS +AA+G + + S+S F +PS
Sbjct: 83 WVGGGTVFGPTPRSYAYHLPRKVSRLALKSVLSQKAADGNMIVIDSIS-FDKPS 135
>gi|433461753|ref|ZP_20419356.1| 50S ribosomal protein L4 [Halobacillus sp. BAB-2008]
gi|432189768|gb|ELK46845.1| 50S ribosomal protein L4 [Halobacillus sp. BAB-2008]
Length = 207
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNE---DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P N+ + G + L VF + ++H V Q A +QGTH K SEVSG
Sbjct: 1 MPKVALLNQGGSNVGEIELNDAVFGIEPNTHVLHETVLMQRANLRQGTHKVKGRSEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+ GG T+ GP PRS++ + +KVRRL L+ A S++ E
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYSYTMPRKVRRLALQSAYSSKVKE 120
Query: 218 GKVSLSVSLSL 228
+ + SLSL
Sbjct: 121 ENIIVLESLSL 131
>gi|302536252|ref|ZP_07288594.1| 50S ribosomal protein L4 [Streptomyces sp. C]
gi|302445147|gb|EFL16963.1| 50S ribosomal protein L4 [Streptomyces sp. C]
Length = 216
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 81/140 (57%), Gaps = 11/140 (7%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I + + + G + L ++FD +IH+VV QLA +QGTH TKT EV G GKK
Sbjct: 4 IDILSPAGDKAGTVELPAEIFDAKTSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA----- 215
P+RQKGTGRAR G+ R PQF GG +HGP+PR ++ + KK++ L+ ALS RA
Sbjct: 64 PYRQKGTGRARQGSTRAPQFAGGGVVHGPQPRDYSQRTPKKMKAAALRGALSDRARHSRI 123
Query: 216 ------AEGKVSLSVSLSLF 229
EG S + +LF
Sbjct: 124 HVVTGVVEGAASTKAAKTLF 143
>gi|296141114|ref|YP_003648357.1| 50S ribosomal protein L4 [Tsukamurella paurometabola DSM 20162]
gi|296029248|gb|ADG80018.1| ribosomal protein L4/L1e [Tsukamurella paurometabola DSM 20162]
Length = 217
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 79/128 (61%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + V + G + L +FDV ++H+VV QLA + GTHSTKT EV G G
Sbjct: 4 LTLDVKTADGKTDGTVELPAAIFDVEPNISLMHQVVIAQLAAARAGTHSTKTRGEVRGGG 63
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
+KP+RQKGTGRAR G+ R PQF GG T+HGP+PR ++ + KK++ L+ AL+ R E
Sbjct: 64 RKPYRQKGTGRARQGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALTERVRED 123
Query: 219 KVSLSVSL 226
++ + L
Sbjct: 124 RIHVVTEL 131
>gi|386841880|ref|YP_006246938.1| 50S ribosomal protein L4 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374102181|gb|AEY91065.1| 50S ribosomal protein L4 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451795174|gb|AGF65223.1| 50S ribosomal protein L4 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 217
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 74/114 (64%)
Query: 109 EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTG 168
E G + L ++FD + +IH+VV QLA +QGTH TKT EV G GKKP+RQKGTG
Sbjct: 12 EKAGSVELPAEIFDAKVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGKKPYRQKGTG 71
Query: 169 RARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
RAR G+ R PQF GG +HGP PR ++ + KK++ L+ AL+ RA ++ +
Sbjct: 72 RARQGSTRAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRGALTDRARHNRIHV 125
>gi|420198155|ref|ZP_14703872.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM020]
gi|394264889|gb|EJE09558.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM020]
Length = 207
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 71/111 (63%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L VF + + ++ + Q A +QGTH+ K S V G G+KPWRQKGTGRAR
Sbjct: 15 GSVELNDAVFAIELNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
GT+R PQ+RGG + GP PRS+A K+ KK+RRL L+ ALS + E ++
Sbjct: 75 QGTIRAPQWRGGGVVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENSFTI 125
>gi|291460719|ref|ZP_06600109.1| ribosomal protein L4/L1 family protein [Oribacterium sp. oral taxon
078 str. F0262]
gi|291416678|gb|EFE90397.1| ribosomal protein L4/L1 family protein [Oribacterium sp. oral taxon
078 str. F0262]
Length = 206
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 78/127 (61%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
++ V + ++ G M L VF PI + ++H V QLA R+QGT T +EVSG G+
Sbjct: 3 IVSVFDMQGKEVGKMELNDAVFAAPINEHLLHLAVVAQLANRRQGTKKALTRAEVSGGGR 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
KPWRQKGTG AR G++R PQ++GG + P PR + LNKK +R LK ALS A+ K
Sbjct: 63 KPWRQKGTGHARQGSIRAPQWKGGGVVFAPTPRDYRKDLNKKEKRAALKAALSNAVADQK 122
Query: 220 VSLSVSL 226
+ + S+
Sbjct: 123 LVVVDSI 129
>gi|182678338|ref|YP_001832484.1| 50S ribosomal protein L4 [Beijerinckia indica subsp. indica ATCC
9039]
gi|226730620|sp|B2IK63.1|RL4_BEII9 RecName: Full=50S ribosomal protein L4
gi|182634221|gb|ACB94995.1| ribosomal protein L4/L1e [Beijerinckia indica subsp. indica ATCC
9039]
Length = 206
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 79/122 (64%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
+ I +T+ E G + L +F + R D+I R++R+QLAKR+ GTH + +++ TG
Sbjct: 1 MKIDITSVNGETAGSIDLDDAIFGLEPRVDLIARMIRYQLAKRRAGTHQSLGRADIHRTG 60
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KK ++QKGTG ARHG+ R PQFRGG GP RSH L KK+R L LK ALSA+A +G
Sbjct: 61 KKMYKQKGTGSARHGSARAPQFRGGGKAFGPVARSHEHDLPKKIRALALKHALSAKAKDG 120
Query: 219 KV 220
+
Sbjct: 121 GI 122
>gi|430748615|ref|YP_007211523.1| 50S ribosomal protein L4 [Thermobacillus composti KWC4]
gi|430732580|gb|AGA56525.1| 50S ribosomal protein L4, bacterial/organelle [Thermobacillus
composti KWC4]
Length = 208
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 74/114 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L+ VF + +H + Q A ++GTH TK SEVSG G+K
Sbjct: 4 VAVYNVSGAQVGEIELSDAVFGIEPHVHALHSAIVLQEAAERRGTHKTKGRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
PWRQKGTGRAR G++R PQ++GG T+ GP PR++ KL KKVRRL ++ ALSA+
Sbjct: 64 PWRQKGTGRARQGSIRAPQWKGGGTVFGPLPRTYGFKLPKKVRRLAIRSALSAK 117
>gi|22547136|ref|NP_057040.2| 39S ribosomal protein L4, mitochondrial isoform a [Homo sapiens]
gi|22547138|ref|NP_666499.1| 39S ribosomal protein L4, mitochondrial isoform a [Homo sapiens]
gi|74733471|sp|Q9BYD3.1|RM04_HUMAN RecName: Full=39S ribosomal protein L4, mitochondrial; Short=L4mt;
Short=MRP-L4
gi|13559361|dbj|BAB40840.1| mitochondrial ribosomal protein L4 (L4mt) [Homo sapiens]
gi|14602670|gb|AAH09858.1| Mitochondrial ribosomal protein L4 [Homo sapiens]
gi|119604489|gb|EAW84083.1| mitochondrial ribosomal protein L4, isoform CRA_a [Homo sapiens]
gi|119604490|gb|EAW84084.1| mitochondrial ribosomal protein L4, isoform CRA_a [Homo sapiens]
Length = 311
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
Query: 52 SGLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDK 111
GLS LA T + P +L K + P + Q V + F E
Sbjct: 19 QGLSSLAEEAARATENPEQVASEGLPEPVLRKVELPVPTHRRPV-QAWVESLRGFEQERV 77
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G L DVF R DI+H+V WQ ++ TKT +EV G G+KPW QKGTGRAR
Sbjct: 78 GLADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRAR 137
Query: 172 HGTLRGPQFRGGTTMHGPK-PRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
HG++R P +RGG HGP+ P S+ L KVR LGLK+AL+ + A+ + + SL L
Sbjct: 138 HGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLAQDDLHIMDSLEL 195
>gi|442806055|ref|YP_007374204.1| 50S ribosomal protein L4 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741905|gb|AGC69594.1| 50S ribosomal protein L4 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 208
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 74/120 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N E G + L+ D+F V + D +H V LA +QGT S KT SEV G G+K
Sbjct: 4 VDVYNIKGEVVGDIYLSDDIFGVEVNTDAMHTAVVNHLANTRQGTQSAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R Q++GG PKPRS+ + KK++RL LK AL+ + + +
Sbjct: 64 PWRQKGTGRARQGSIRAVQWKGGGVAFAPKPRSYRYTIPKKLKRLALKSALTTKVLDNNI 123
>gi|332852922|ref|XP_001164062.2| PREDICTED: 39S ribosomal protein L4, mitochondrial isoform 5 [Pan
troglodytes]
gi|410206720|gb|JAA00579.1| mitochondrial ribosomal protein L4 [Pan troglodytes]
gi|410253658|gb|JAA14796.1| mitochondrial ribosomal protein L4 [Pan troglodytes]
gi|410305182|gb|JAA31191.1| mitochondrial ribosomal protein L4 [Pan troglodytes]
gi|410332115|gb|JAA35004.1| mitochondrial ribosomal protein L4 [Pan troglodytes]
Length = 311
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
Query: 52 SGLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDK 111
GLS LA T + P +L K + P + Q V + F E
Sbjct: 19 QGLSSLAEEAARATENPEQVASEGLPEPVLRKVELPVPTHRRPV-QAWVESLRGFEQERV 77
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G L DVF R DI+H+V WQ ++ TKT +EV G G+KPW QKGTGRAR
Sbjct: 78 GLADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRAR 137
Query: 172 HGTLRGPQFRGGTTMHGPK-PRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
HG++R P +RGG HGP+ P S+ L KVR LGLK+AL+ + A+ + + SL L
Sbjct: 138 HGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLAQDDLHIMDSLEL 195
>gi|392530552|ref|ZP_10277689.1| 50S ribosomal protein L4 [Carnobacterium maltaromaticum ATCC 35586]
gi|414085645|ref|YP_006994359.1| 50S ribosomal protein L4 [Carnobacterium maltaromaticum LMA28]
gi|412999235|emb|CCO13044.1| 50S ribosomal protein L4 [Carnobacterium maltaromaticum LMA28]
Length = 207
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 88/151 (58%), Gaps = 9/151 (5%)
Query: 106 FFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
F +D G + L +F + ++++ + Q A +QG HS K S V G G+KPW
Sbjct: 6 LFKQDGTQNGEVTLNDAIFGIEPNENVVFDAIIMQRASLRQGNHSVKNRSAVRGGGRKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
RQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K LS + AE + +
Sbjct: 66 RQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSTKVAENNLIV 125
Query: 223 SVSLSLFLRP---SFSLSLK--NTDTHVHIV 248
+L+ F P F+ LK N D V +V
Sbjct: 126 VDALN-FDAPKTKEFAQVLKNLNVDQKVLVV 155
>gi|317507410|ref|ZP_07965144.1| ribosomal protein L4/L1 family protein [Segniliparus rugosus ATCC
BAA-974]
gi|316254295|gb|EFV13631.1| ribosomal protein L4/L1 family protein [Segniliparus rugosus ATCC
BAA-974]
Length = 218
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 79/135 (58%)
Query: 99 LVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG 158
L + + + G L ++FD P ++H+VV QLA +QGTH KT EVSG G
Sbjct: 3 LTVTIHAADGKSAGTFDLPAEIFDAPANISLLHQVVTAQLAAARQGTHKAKTRGEVSGGG 62
Query: 159 KKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
KKP++QKGTGRAR G+ R P F GG T+HGP PR ++ + KK++ L+ ALS RA
Sbjct: 63 KKPYKQKGTGRARQGSTRAPHFTGGGTVHGPVPRDYSQRTPKKMKAAALRGALSDRARGE 122
Query: 219 KVSLSVSLSLFLRPS 233
++ + L PS
Sbjct: 123 RIHIVDELVAGQTPS 137
>gi|167629468|ref|YP_001679967.1| 50S ribosomal protein L4 [Heliobacterium modesticaldum Ice1]
gi|226730671|sp|B0TC57.1|RL4_HELMI RecName: Full=50S ribosomal protein L4
gi|167592208|gb|ABZ83956.1| 50S ribosomal protein l4 [Heliobacterium modesticaldum Ice1]
Length = 207
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N + G + L +F + + ++H+ V QLA ++GTH K+ EVSG
Sbjct: 1 MPKVALYNTEGAQVGEIELNDAIFGIEPNEAVMHQAVVTQLAAWRRGTHKVKSRGEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRAR GT R P +RGG + GP+PRS+ I + KKVRRL LK ALS +
Sbjct: 61 GKKPWRQKGTGRARAGTSRSPLWRGGAIIFGPQPRSYKIAMPKKVRRLALKSALSDKVRS 120
Query: 218 GKVSLSVSLSL 228
G + + +L +
Sbjct: 121 GNLIVVDALEM 131
>gi|269792793|ref|YP_003317697.1| 50S ribosomal protein L4 [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100428|gb|ACZ19415.1| ribosomal protein L4/L1e [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 208
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 72/114 (63%)
Query: 104 TNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWR 163
NF E G + L+ VF P+ +H+VV LA + GTH TK EVSG G+KPWR
Sbjct: 7 VNFNGEVIGEVELSEAVFGAPVHVPAMHQVVVAHLANCRVGTHDTKDRGEVSGGGRKPWR 66
Query: 164 QKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
QK TGRAR G++R P + GG HGP PR + K+NKKVRRL L+ AL+ +A E
Sbjct: 67 QKHTGRARQGSIRSPLWVGGGVAHGPHPRDYHQKVNKKVRRLALRSALTLKAKE 120
>gi|146181037|ref|XP_001022027.2| ribosomal protein L4/L1 family protein [Tetrahymena thermophila]
gi|146144303|gb|EAS01782.2| ribosomal protein L4/L1 family protein [Tetrahymena thermophila
SB210]
Length = 358
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
Query: 97 QDLVIPVTNFFNED----KGFMV-LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTI 151
Q L +PV F E+ G V L D+F+VP+R+DI+H V W+ + + TH TKT
Sbjct: 69 QPLRVPVLKFLAENGQAYTGKTVDLDHDIFNVPLRRDIVHSYVLWRQNRDEIKTHITKTK 128
Query: 152 SEVSGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIAL 211
VSG+GKKP+ QKGTG+AR G R P + G HG KPR LNKK+R LK+ L
Sbjct: 129 GTVSGSGKKPYAQKGTGKARMGNKRAPGRKKGGKAHGAKPRILRYPLNKKIRLQALKVVL 188
Query: 212 SARAAEGKVSL 222
SA+ AEGK+ +
Sbjct: 189 SAKLAEGKLRI 199
>gi|25027079|ref|NP_737133.1| 50S ribosomal protein L4 [Corynebacterium efficiens YS-314]
gi|259506792|ref|ZP_05749692.1| 50S ribosomal protein L4 [Corynebacterium efficiens YS-314]
gi|46577270|sp|Q8FS79.1|RL4_COREF RecName: Full=50S ribosomal protein L4
gi|23492359|dbj|BAC17333.1| putative 50S ribosomal protein L4 [Corynebacterium efficiens
YS-314]
gi|259165663|gb|EEW50217.1| 50S ribosomal protein L4 [Corynebacterium efficiens YS-314]
Length = 218
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 78/125 (62%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V G + L ++FD + ++H+VV QLA +QGTHSTKT +EV G
Sbjct: 3 NLTLDVQTAEGTTNGSVDLPAEIFDREVSVALLHQVVNAQLAAARQGTHSTKTRAEVRGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KP+RQKGTGRAR G++R P F GG HGPKPR +A + KK+ + L ALS RA
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPHFTGGGISHGPKPRDYAQRTPKKMIKAALYGALSDRARN 122
Query: 218 GKVSL 222
++ +
Sbjct: 123 ERIHV 127
>gi|299541933|ref|ZP_07052256.1| 50S ribosomal protein L4 [Lysinibacillus fusiformis ZC1]
gi|424739372|ref|ZP_18167791.1| 50S ribosomal protein L4 [Lysinibacillus fusiformis ZB2]
gi|298725671|gb|EFI66312.1| 50S ribosomal protein L4 [Lysinibacillus fusiformis ZC1]
gi|422946769|gb|EKU41175.1| 50S ribosomal protein L4 [Lysinibacillus fusiformis ZB2]
Length = 207
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 70/106 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F + + ++ V Q A +QG H K SEV+G G+KPWRQKGTGRAR
Sbjct: 15 GEIELNDAIFGIEPNEAVLFDAVVAQRASLRQGNHKVKNRSEVAGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G++R PQ+RGG + GP PRS++ KL KKVRRL LK ALSA+ E
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLALKSALSAKVVE 120
>gi|99080088|ref|YP_612242.1| 50S ribosomal protein L4 [Ruegeria sp. TM1040]
gi|122398432|sp|Q1GK36.1|RL4_SILST RecName: Full=50S ribosomal protein L4
gi|99036368|gb|ABF62980.1| LSU ribosomal protein L4P [Ruegeria sp. TM1040]
Length = 205
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 70/109 (64%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ D+F + R DI+HRVVRWQ Q GTH KT SE S + KK +RQKGTG AR
Sbjct: 14 GDIELSEDLFGLEPRADILHRVVRWQRNNAQAGTHKVKTRSETSYSTKKIYRQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
HG P FR G GP PRSH L KK R+LGL+ ALSA+A G++
Sbjct: 74 HGDRNAPIFRKGGIYKGPTPRSHGHDLTKKFRKLGLRHALSAKAKAGEL 122
>gi|431792470|ref|YP_007219375.1| 50S ribosomal protein L4 [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782696|gb|AGA67979.1| 50S ribosomal protein L4, bacterial/organelle [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 207
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 79/128 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L VF + ++H+ V QLA +++GTHST EV G G+K
Sbjct: 4 VQVVNMQGSPVGELELNEYVFGIEPNVHVLHQAVVGQLASQRRGTHSTLLRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R P +RGG + GPKPR + L KKVRRL L+ ALS++ E ++
Sbjct: 64 PWRQKGTGRARAGSIRSPLWRGGAILFGPKPRKYGFSLPKKVRRLALRSALSSKVNEQQL 123
Query: 221 SLSVSLSL 228
+ LSL
Sbjct: 124 IVLEDLSL 131
>gi|169830029|ref|YP_001700187.1| 50S ribosomal protein L4 [Lysinibacillus sphaericus C3-41]
gi|226730684|sp|B1HMX9.1|RL4_LYSSC RecName: Full=50S ribosomal protein L4
gi|168994517|gb|ACA42057.1| 50S ribosomal protein L4 [Lysinibacillus sphaericus C3-41]
Length = 207
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 70/106 (66%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F + + ++ V Q A +QG H K SEV+G G+KPWRQKGTGRAR
Sbjct: 15 GEIELNDAIFGIEPNEAVLFDAVVAQRASLRQGNHKVKNRSEVAGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G++R PQ+RGG + GP PRS++ KL KKVRRL LK ALSA+ E
Sbjct: 75 QGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLALKSALSAKVVE 120
>gi|336419086|ref|ZP_08599353.1| ribosomal protein L4/L1 family protein [Fusobacterium sp. 11_3_2]
gi|336164091|gb|EGN67003.1| ribosomal protein L4/L1 family protein [Fusobacterium sp. 11_3_2]
Length = 209
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 76/121 (62%)
Query: 100 VIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGK 159
V+ + N E G + + VF + K ++H V+ +LA +QGT STKT + V G G+
Sbjct: 3 VLNIYNLAGEQTGTVEVNDAVFGIKPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGR 62
Query: 160 KPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
KP++QKGTGRAR GT+R P GG GP PRS+ K+NKKVR L L+ ALSA+ A G
Sbjct: 63 KPFKQKGTGRARQGTIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSALSAKVAAGN 122
Query: 220 V 220
+
Sbjct: 123 I 123
>gi|325964165|ref|YP_004242071.1| 50S ribosomal protein L4P [Arthrobacter phenanthrenivorans Sphe3]
gi|323470252|gb|ADX73937.1| LSU ribosomal protein L4P [Arthrobacter phenanthrenivorans Sphe3]
Length = 207
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 78/123 (63%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++FDV ++H+VV QLA +QGTH TKT +EVSG G+KP++QKGTGRAR G++
Sbjct: 9 LPAEIFDVQTNVPLLHQVVVAQLAAARQGTHKTKTRAEVSGAGRKPFKQKGTGRARQGSI 68
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSLFLRPSFS 235
R P GG +HGP PR ++ + KK+ L+ ALS RA G++ + L +PS
Sbjct: 69 RAPHMTGGGIVHGPTPRDYSQRTPKKMIAAALRGALSDRARNGRIHVVAELVEGSKPSSK 128
Query: 236 LSL 238
+L
Sbjct: 129 AAL 131
>gi|47212296|emb|CAF90559.1| unnamed protein product [Tetraodon nigroviridis]
Length = 302
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
+E G L DVF VP R DI+H V WQ ++ TK +EV G G+KPWRQKG+
Sbjct: 83 SEPVGVAHLHPDVFAVPPRLDILHMVETWQRNFKRISHAHTKVRAEVRGGGRKPWRQKGS 142
Query: 168 GRARHGTLRGPQFRGGTTMHGPK-PRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSL 226
GRARHG++R P +RGG HGP+ P S+ L KVR LGLK+ALS++ A+ + + SL
Sbjct: 143 GRARHGSIRSPLWRGGGVSHGPRGPTSYYYMLPMKVRVLGLKVALSSKLAQSHLHVVESL 202
Query: 227 SL 228
+L
Sbjct: 203 NL 204
>gi|295099236|emb|CBK88325.1| LSU ribosomal protein L4P [Eubacterium cylindroides T2-87]
Length = 209
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 85/151 (56%), Gaps = 8/151 (5%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N G M L VF + + + + Q A R+QGT TK SEVSG G+K
Sbjct: 4 IDVINQTGAVVGSMELNDAVFGIEPNQQSLFDALVMQQASRRQGTADTKGRSEVSGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR G++R QFRGG T+ G PRS+ +NKKVRRL +K ALS + A
Sbjct: 64 PYRQKGTGRARQGSIRATQFRGGGTVFGATPRSYKYTINKKVRRLAVKSALSEKLA---- 119
Query: 221 SLSVSLSLFLRPSFSLSLKNTDTHVHIVSSI 251
+ +L + F +S T T V I+ +I
Sbjct: 120 ----AQALSVLDKFEISEPKTKTFVSIMEAI 146
>gi|386579050|ref|YP_006075455.1| 50S ribosomal protein L4 [Streptococcus suis JS14]
gi|319757242|gb|ADV69184.1| 50S ribosomal protein L4 [Streptococcus suis JS14]
Length = 207
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 71/108 (65%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G +VL +F + + ++ V+ Q A +QGTH+ K S VSG G+KPWRQKGTGRAR
Sbjct: 15 GEVVLNDAIFGIEPNQAVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGK 219
G++R PQ+RGG + G PRS+A KL +KVRRL LK S + AE K
Sbjct: 75 QGSIRSPQWRGGGVVFGTTPRSYAYKLPQKVRRLALKSVYSEKVAENK 122
>gi|429220609|ref|YP_007182253.1| 50S ribosomal protein L4 [Deinococcus peraridilitoris DSM 19664]
gi|429131472|gb|AFZ68487.1| 50S ribosomal protein L4, bacterial/organelle [Deinococcus
peraridilitoris DSM 19664]
Length = 201
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 121 FDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 179
D+P + ++H VV WQLAKR+QG+ STKT +EVS TGKK + QKGTG ARHG P
Sbjct: 17 LDLPDVNPGLLHEVVTWQLAKRRQGSASTKTRAEVSRTGKKMYSQKGTGNARHGNRAAPI 76
Query: 180 FRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
F GG GPKPR++ L KKVR+LGL +ALS RA GK+
Sbjct: 77 FVGGGVAFGPKPRNYGFTLPKKVRQLGLAMALSDRAQSGKL 117
>gi|254421500|ref|ZP_05035218.1| ribosomal protein L4/L1 family [Synechococcus sp. PCC 7335]
gi|196188989|gb|EDX83953.1| ribosomal protein L4/L1 family [Synechococcus sp. PCC 7335]
Length = 210
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 73/115 (63%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V N+ E+ G + L V I+HR + Q+ +QGT STKT +EV G G+KPW
Sbjct: 6 VKNWQGEEAGSVSLELKVASEENASHIVHRALVRQINNGRQGTASTKTRAEVRGGGRKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
RQKGTGRAR G++R P +RGG + GPKPR + K+N+K RRL L+ A +RA E
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYTTKMNRKERRLALRTAFQSRANE 120
>gi|240145877|ref|ZP_04744478.1| ribosomal protein L4/L1 family protein [Roseburia intestinalis
L1-82]
gi|257202026|gb|EEV00311.1| ribosomal protein L4/L1 family protein [Roseburia intestinalis
L1-82]
gi|291535431|emb|CBL08543.1| LSU ribosomal protein L4P [Roseburia intestinalis M50/1]
Length = 206
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 75/128 (58%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ G + L VF V + + ++H V QLA +QGT KT SEV G G+K
Sbjct: 4 VAVYNMEGKEVGSLELNDAVFGVEVNEHLVHMAVLQQLANNRQGTQKAKTRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ+ G + P PR ++ KLNKK +R LK AL++R E K
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTHGGVVFAPVPRDYSFKLNKKEKRAALKSALTSRVNESKF 123
Query: 221 SLSVSLSL 228
+ L L
Sbjct: 124 IVVDELKL 131
>gi|300857763|ref|YP_003782746.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis FRC41]
gi|375287929|ref|YP_005122470.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
3/99-5]
gi|379714632|ref|YP_005302969.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 316]
gi|383313531|ref|YP_005374386.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
P54B96]
gi|384503951|ref|YP_005680621.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 1002]
gi|384506040|ref|YP_005682709.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis C231]
gi|384508130|ref|YP_005684798.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis I19]
gi|385806797|ref|YP_005843194.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 267]
gi|386739695|ref|YP_006212875.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 31]
gi|387135897|ref|YP_005691877.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
42/02-A]
gi|387137952|ref|YP_005693931.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis CIP
52.97]
gi|387139986|ref|YP_005695964.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
1/06-A]
gi|389849699|ref|YP_006351934.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 258]
gi|392399906|ref|YP_006436506.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis Cp162]
gi|300685217|gb|ADK28139.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis FRC41]
gi|302205501|gb|ADL09843.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis C231]
gi|302330056|gb|ADL20250.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 1002]
gi|308275737|gb|ADO25636.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis I19]
gi|348606342|gb|AEP69615.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
42/02-A]
gi|349734430|gb|AEQ05908.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis CIP
52.97]
gi|355391777|gb|AER68442.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
1/06-A]
gi|371575218|gb|AEX38821.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
3/99-5]
gi|377653338|gb|AFB71687.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 316]
gi|380869032|gb|AFF21506.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis
P54B96]
gi|383804190|gb|AFH51269.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 267]
gi|384476389|gb|AFH90185.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 31]
gi|388247005|gb|AFK15996.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis 258]
gi|390530984|gb|AFM06713.1| 50S ribosomal protein L4 [Corynebacterium pseudotuberculosis Cp162]
Length = 217
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%)
Query: 98 DLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+L + V + G + L ++FD ++H+VV QLA ++QGTHSTKT +EVSG
Sbjct: 3 NLKLDVLTAEGKTDGQVELPAEIFDREASVALMHQVVNAQLAAKRQGTHSTKTRAEVSGG 62
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KP+RQKGTGRAR G++R P F GG HGPKPR ++ + KK+ + L ALS RA
Sbjct: 63 GRKPFRQKGTGRARQGSIRAPHFTGGGISHGPKPRDYSQRTPKKMIKAALYGALSDRARH 122
Query: 218 GKVSLSVSL 226
++ + L
Sbjct: 123 ERIHVITEL 131
>gi|381181875|ref|ZP_09890703.1| 50S ribosomal protein L4 [Listeriaceae bacterium TTU M1-001]
gi|380318250|gb|EIA21541.1| 50S ribosomal protein L4 [Listeriaceae bacterium TTU M1-001]
Length = 207
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 91/156 (58%), Gaps = 9/156 (5%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P + +D G + L VF + + ++ V+ Q A +QGTH K SEV G
Sbjct: 1 MPKLSLLKQDGSKAGEITLNDAVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS+A KL KKVRRL +K LS++ +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVQD 120
Query: 218 GKVSLSVSLSLFLRP---SFSLSLKN--TDTHVHIV 248
+ + +L+ F P F+ LKN D+ IV
Sbjct: 121 ENIVVLENLA-FDAPKTKDFAAFLKNISVDSKALIV 155
>gi|291532094|emb|CBK97679.1| LSU ribosomal protein L4P [Eubacterium siraeum 70/3]
gi|291558165|emb|CBL35282.1| LSU ribosomal protein L4P [Eubacterium siraeum V10Sc8a]
Length = 206
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 68/103 (66%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++F + ++H V LA ++QGT ST T +EVSG GKKPWRQKGTG AR G+
Sbjct: 19 LNDNIFGIEPNTVVMHAAVVNYLANQRQGTQSTLTRTEVSGGGKKPWRQKGTGHARQGST 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
R PQ+ G GPKPRS+ LNKKV+RL LK ALSA+ +G
Sbjct: 79 RAPQWTHGGVALGPKPRSYTYSLNKKVKRLALKSALSAKVQDG 121
>gi|357411732|ref|YP_004923468.1| 50S ribosomal protein L4 [Streptomyces flavogriseus ATCC 33331]
gi|320009101|gb|ADW03951.1| ribosomal protein L4/L1e [Streptomyces flavogriseus ATCC 33331]
Length = 216
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 79/133 (59%), Gaps = 11/133 (8%)
Query: 108 NEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGT 167
+ G + L ++FD +IH+VV QLA +QGTH TKT EV G G+KP+RQKGT
Sbjct: 11 GDKAGTVELPAEIFDAKTSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGGRKPYRQKGT 70
Query: 168 GRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARA-----------A 216
GRAR G+ R PQF GG +HGP+PR ++ + KK++ L+ ALS RA
Sbjct: 71 GRARQGSTRAPQFAGGGVVHGPQPRDYSQRTPKKMKAAALRGALSDRARHSRIHVVTGVV 130
Query: 217 EGKVSLSVSLSLF 229
EG +S + +LF
Sbjct: 131 EGGISTKAAKTLF 143
>gi|354558441|ref|ZP_08977696.1| ribosomal protein L4/L1e [Desulfitobacterium metallireducens DSM
15288]
gi|353546919|gb|EHC16366.1| ribosomal protein L4/L1e [Desulfitobacterium metallireducens DSM
15288]
Length = 207
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 77/128 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N G + L VF + ++H V QLA +++GT ST EV G G+K
Sbjct: 4 VQVVNMQGSPVGEIELNEYVFGIEPNAHVLHSAVVAQLASQRRGTSSTLLRGEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G++R P FRGG + GPKPR + L KKVRRL L+ ALS++ E K+
Sbjct: 64 PWRQKGTGRARAGSIRSPLFRGGAVLFGPKPRDYGFSLPKKVRRLALRSALSSKVNEQKL 123
Query: 221 SLSVSLSL 228
+ LSL
Sbjct: 124 IVLEDLSL 131
>gi|167749438|ref|ZP_02421565.1| hypothetical protein EUBSIR_00392 [Eubacterium siraeum DSM 15702]
gi|167657610|gb|EDS01740.1| 50S ribosomal protein L4 [Eubacterium siraeum DSM 15702]
Length = 206
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 68/103 (66%)
Query: 116 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTL 175
L ++F + ++H V LA ++QGT ST T +EVSG GKKPWRQKGTG AR G+
Sbjct: 19 LNDNIFGIEPNTVVMHAAVVNYLANQRQGTQSTLTRTEVSGGGKKPWRQKGTGHARQGST 78
Query: 176 RGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEG 218
R PQ+ G GPKPRS+ LNKKV+RL LK ALSA+ +G
Sbjct: 79 RAPQWTHGGVALGPKPRSYTYSLNKKVKRLALKSALSAKVQDG 121
>gi|225016284|ref|ZP_03705476.1| hypothetical protein CLOSTMETH_00187 [Clostridium methylpentosum
DSM 5476]
gi|224950959|gb|EEG32168.1| hypothetical protein CLOSTMETH_00187 [Clostridium methylpentosum
DSM 5476]
Length = 207
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 80/128 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ V N ++ + L+ +F + K ++H V LA ++QGT ST T +EV G GKK
Sbjct: 4 VAVMNMAGKEVSKIDLSDAIFGIEPNKAVLHMAVVNYLANQRQGTQSTLTRTEVRGGGKK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTG AR G+ R PQ+ G GPKPR ++ LNKKV+RL +K ALSA+A + +
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTHGGVALGPKPRDYSYSLNKKVKRLAMKSALSAKAVDNDL 123
Query: 221 SLSVSLSL 228
+ S++L
Sbjct: 124 IVVDSIAL 131
>gi|51894209|ref|YP_076900.1| 50S ribosomal protein L4 [Symbiobacterium thermophilum IAM 14863]
gi|81610342|sp|Q67JU4.1|RL4_SYMTH RecName: Full=50S ribosomal protein L4
gi|51857898|dbj|BAD42056.1| 50S ribosomal protein L4 [Symbiobacterium thermophilum IAM 14863]
Length = 207
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 101 IPVTNFFNEDK---GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P +N++ G + L+ VF + ++H VV+ LA ++QGT TKT +EVSG
Sbjct: 1 MPKVAVYNKEGATVGEITLSDAVFGAEVNPGLLHEVVQMYLANKRQGTADTKTRAEVSGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRARHG++R P +R G + GP PR + + KK RR L+ ALSA+
Sbjct: 61 GRKPWRQKGTGRARHGSIRSPLWRKGGIVFGPHPREYGWSMPKKARRAALRQALSAKVKS 120
Query: 218 GKV 220
G++
Sbjct: 121 GEL 123
>gi|304405615|ref|ZP_07387274.1| ribosomal protein L4/L1e [Paenibacillus curdlanolyticus YK9]
gi|304345654|gb|EFM11489.1| ribosomal protein L4/L1e [Paenibacillus curdlanolyticus YK9]
Length = 207
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 78/128 (60%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N G + LA VF + ++H V Q A ++GTH TK SEV G G+K
Sbjct: 4 VALYNVSGSQVGEVELADSVFGIQPNTHVLHSAVLLQQAAERRGTHKTKGRSEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PW+QKGTGRAR G++R PQ+ GG T+ GP PRS+ KL +KVRRL +K ALS + ++
Sbjct: 64 PWKQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYGFKLPRKVRRLAIKSALSTKVISNEI 123
Query: 221 SLSVSLSL 228
+ L+L
Sbjct: 124 VVLDQLAL 131
>gi|294496986|ref|YP_003560686.1| 50S ribosomal protein L4 [Bacillus megaterium QM B1551]
gi|294346923|gb|ADE67252.1| 50S ribosomal protein L4 [Bacillus megaterium QM B1551]
Length = 207
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
Query: 101 IPVTNFFN---EDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN E+ G + L VF + ++ + Q A ++QGT K SEV G
Sbjct: 1 MPKVALFNQNGENVGEIELQDAVFGIEPNNKVLFDAIVMQRASQRQGTSKVKNRSEVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+RGG + GP PRS++ KL KKVRRL +K ALS + +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPVPRSYSYKLPKKVRRLAIKSALSTKVQD 120
Query: 218 GKVSLSVSLSL 228
+ + +LS
Sbjct: 121 NSIVVLEALSF 131
>gi|406925479|gb|EKD61943.1| hypothetical protein ACD_54C00012G0002 [uncultured bacterium]
Length = 206
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 79/117 (67%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L +F + R D++HRVVRWQ A+ Q GTHST T +EVS + KK ++QKGTG AR
Sbjct: 14 GTIDLDEALFGLDPRADVLHRVVRWQRARSQAGTHSTLTRAEVSYSTKKIYKQKGTGGAR 73
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
HG+ + P FR G + GP PRSHA L KK R LGL+ ALSA+A G++ + + S+
Sbjct: 74 HGSKKAPIFRHGGVVKGPTPRSHAHDLPKKFRALGLRHALSAKAKAGELVILDTASM 130
>gi|303233121|ref|ZP_07319794.1| 50S ribosomal protein L4 [Atopobium vaginae PB189-T1-4]
gi|302480706|gb|EFL43793.1| 50S ribosomal protein L4 [Atopobium vaginae PB189-T1-4]
Length = 208
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 83/133 (62%), Gaps = 1/133 (0%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + + L+ +VF + ++H+VV A +QGTHSTK S VSG G K
Sbjct: 4 IDVLNVEGKKADAVELSSNVFGIEPNIAVVHQVVVAYEACLRQGTHSTKNRSAVSGGGVK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
P+RQKGTGRAR GT+R PQ+ GG + GP P SHA++ NKK ++L ++ LS + A+G++
Sbjct: 64 PFRQKGTGRARQGTIRAPQWAGGGVVFGPTPHSHALRSNKKEKKLAMRSVLSGKVADGEL 123
Query: 221 SLSVSLSLFLRPS 233
L L+ F PS
Sbjct: 124 VLLDKLA-FEEPS 135
>gi|434391778|ref|YP_007126725.1| LSU ribosomal protein L4P [Gloeocapsa sp. PCC 7428]
gi|428263619|gb|AFZ29565.1| LSU ribosomal protein L4P [Gloeocapsa sp. PCC 7428]
Length = 210
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 74/115 (64%)
Query: 103 VTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPW 162
V N+ E+ G L V + I+HR + Q +QGT S+KT +EV G G+KPW
Sbjct: 6 VKNWQGEEVGQAALDLQVANEKSAAHIVHRALVRQTTNARQGTASSKTRAEVRGGGRKPW 65
Query: 163 RQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
RQKGTGRAR G++R P +RGG + GPKPR + IK+N+K RRL L+ AL +RA +
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYEIKMNRKERRLALRTALVSRAED 120
>gi|334338902|ref|YP_004543882.1| 50S ribosomal protein L4 [Desulfotomaculum ruminis DSM 2154]
gi|334090256|gb|AEG58596.1| ribosomal protein L4/L1e [Desulfotomaculum ruminis DSM 2154]
Length = 206
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 79/128 (61%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + L +F + + ++H V QLA ++QGTH TKT +EV G G+K
Sbjct: 4 VALYNISGEQVGEVELNDAIFGIEPNEPVLHDAVVMQLANQRQGTHDTKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ R P +R G + GP PR ++ L KKVRRL LK ALS++ + +
Sbjct: 64 PWRQKGTGRARAGSTRSPIWRSGGVVFGPHPRDYSYSLPKKVRRLALKSALSSKVLDNDI 123
Query: 221 SLSVSLSL 228
+ L++
Sbjct: 124 IVLDGLTM 131
>gi|397476516|ref|XP_003809645.1| PREDICTED: 39S ribosomal protein L4, mitochondrial [Pan paniscus]
Length = 311
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
Query: 52 SGLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDK 111
GLS LA T + P +L K + P + Q V + F E
Sbjct: 19 QGLSSLAEEAARATENPEQVASEGLPEPVLRKVELPVPTHRRPV-QAWVESLRGFEQERV 77
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G L DVF R DI+H+V WQ ++ TKT +EV G G+KPW QKGTGRAR
Sbjct: 78 GLADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRAR 137
Query: 172 HGTLRGPQFRGGTTMHGPK-PRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
HG++R P +RGG HGP+ P S+ L KVR LGLK+AL+ + A+ + + SL L
Sbjct: 138 HGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRVLGLKVALTVKLAQDDLHIMDSLEL 195
>gi|229552709|ref|ZP_04441434.1| ribosomal protein L4 [Lactobacillus rhamnosus LMS2-1]
gi|385836316|ref|YP_005874091.1| 50S ribosomal protein L4 [Lactobacillus rhamnosus ATCC 8530]
gi|229313915|gb|EEN79888.1| ribosomal protein L4 [Lactobacillus rhamnosus LMS2-1]
gi|355395808|gb|AER65238.1| 50S ribosomal protein L4 [Lactobacillus rhamnosus ATCC 8530]
Length = 207
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 76/119 (63%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G + L ++ V ++++ V Q A +QGTH+ K S VSG G+KPWRQKGTGR
Sbjct: 13 ENGTVELNDAIWAVEPNENVVFDAVVMQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGR 72
Query: 170 ARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
AR G++R PQ+RGG + GP PRS+A KL KKVRRL +K LS + +G + + LS
Sbjct: 73 ARQGSIRSPQWRGGGIVFGPTPRSYAYKLPKKVRRLAIKSVLSQKVLDGDLVVVDGLSF 131
>gi|323340375|ref|ZP_08080632.1| 50S ribosomal protein L4 [Lactobacillus ruminis ATCC 25644]
gi|347524785|ref|YP_004831533.1| 50S ribosomal protein L4 [Lactobacillus ruminis ATCC 27782]
gi|417974567|ref|ZP_12615376.1| 50S ribosomal protein L4 [Lactobacillus ruminis ATCC 25644]
gi|323092151|gb|EFZ34766.1| 50S ribosomal protein L4 [Lactobacillus ruminis ATCC 25644]
gi|345283744|gb|AEN77597.1| 50S ribosomal protein L4 [Lactobacillus ruminis ATCC 27782]
gi|346329013|gb|EGX97323.1| 50S ribosomal protein L4 [Lactobacillus ruminis ATCC 25644]
Length = 207
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 88/154 (57%), Gaps = 7/154 (4%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P F +D G + L VF + +++ V Q A +QGTH+ K S V G
Sbjct: 1 MPTVALFKQDGTQNGDVQLNDAVFGIEPNNNVVFDAVIMQRASLRQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
GKKPWRQKGTGRAR G++R PQ+ GG T+ GP PRS+A KL +KVRRL +K LS + +
Sbjct: 61 GKKPWRQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYAYKLPRKVRRLAIKSVLSQKVLD 120
Query: 218 GKVSLSVSLSLFLRP---SFSLSLKNTDTHVHIV 248
+ + +L+ F P +F+ L N D ++
Sbjct: 121 NSLVVVDALT-FEAPKTKAFAEVLNNLDVKSKVL 153
>gi|323703547|ref|ZP_08115193.1| ribosomal protein L4/L1e [Desulfotomaculum nigrificans DSM 574]
gi|333922449|ref|YP_004496029.1| 50S ribosomal protein L4 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323531538|gb|EGB21431.1| ribosomal protein L4/L1e [Desulfotomaculum nigrificans DSM 574]
gi|333748010|gb|AEF93117.1| ribosomal protein L4/L1e [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 206
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 80/128 (62%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
+ + N E G + L +VF + + ++H VV LA ++QGTH TKT +EV G G+K
Sbjct: 4 VALYNISGEQIGEVELKDEVFGIEPNEAVMHDVVVMHLANQRQGTHDTKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PWRQKGTGRAR G+ R P +R G + GP PR ++ L KKVRRL LK ALS++ + +
Sbjct: 64 PWRQKGTGRARAGSSRSPIWRKGGIVFGPHPRDYSYSLPKKVRRLALKSALSSKVLDDNI 123
Query: 221 SLSVSLSL 228
+ L++
Sbjct: 124 IVLDKLTM 131
>gi|258509481|ref|YP_003172232.1| 50S ribosomal protein L4 [Lactobacillus rhamnosus GG]
gi|385829115|ref|YP_005866887.1| 50S ribosomal protein L4 [Lactobacillus rhamnosus GG]
gi|257149408|emb|CAR88381.1| LSU/50S ribosomal protein L4P [Lactobacillus rhamnosus GG]
gi|259650760|dbj|BAI42922.1| 50S ribosomal protein L4 [Lactobacillus rhamnosus GG]
Length = 207
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 76/119 (63%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G + L ++ V ++++ V Q A +QGTH+ K S VSG G+KPWRQKGTGR
Sbjct: 13 ENGTVELNDAIWAVEPNENVVFDAVVMQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGR 72
Query: 170 ARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
AR G++R PQ+RGG + GP PRS+A KL KKVRRL +K LS + +G + + LS
Sbjct: 73 ARQGSIRSPQWRGGGIVFGPTPRSYAYKLPKKVRRLAIKSVLSQKVLDGDLVVVDGLSF 131
>gi|299143193|ref|ZP_07036273.1| ribosomal protein L4/L1 family protein [Peptoniphilus sp. oral
taxon 386 str. F0131]
gi|298517678|gb|EFI41417.1| ribosomal protein L4/L1 family protein [Peptoniphilus sp. oral
taxon 386 str. F0131]
Length = 207
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 77/120 (64%)
Query: 101 IPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKK 160
I V N + L ++FD+ I + ++ VV+ LA R+QGT S KT +EV G G+K
Sbjct: 4 IQVVNMEGAAVSEIELNENIFDIDINEHAVYLVVKNILANRRQGTKSAKTRAEVRGGGRK 63
Query: 161 PWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKV 220
PW+QKGTGRAR G++R PQ+RGG + PKPR + KKVRRL L+ AL+++ E ++
Sbjct: 64 PWKQKGTGRARQGSIRSPQWRGGGIVFAPKPRDFSYTTPKKVRRLALRSALTSKVRENEM 123
>gi|199598833|ref|ZP_03212244.1| 50S ribosomal protein L4 [Lactobacillus rhamnosus HN001]
gi|258540678|ref|YP_003175177.1| 50S ribosomal protein L4 [Lactobacillus rhamnosus Lc 705]
gi|418072341|ref|ZP_12709613.1| 50S ribosomal protein L4 [Lactobacillus rhamnosus R0011]
gi|421770009|ref|ZP_16206712.1| LSU ribosomal protein L4p (L1e) [Lactobacillus rhamnosus LRHMDP2]
gi|421773264|ref|ZP_16209911.1| LSU ribosomal protein L4p (L1e) [Lactobacillus rhamnosus LRHMDP3]
gi|423078543|ref|ZP_17067223.1| 50S ribosomal protein L4 [Lactobacillus rhamnosus ATCC 21052]
gi|199590245|gb|EDY98340.1| 50S ribosomal protein L4 [Lactobacillus rhamnosus HN001]
gi|257152354|emb|CAR91326.1| LSU/50S ribosomal protein L4P [Lactobacillus rhamnosus Lc 705]
gi|357537592|gb|EHJ21616.1| 50S ribosomal protein L4 [Lactobacillus rhamnosus R0011]
gi|357550574|gb|EHJ32387.1| 50S ribosomal protein L4 [Lactobacillus rhamnosus ATCC 21052]
gi|411182170|gb|EKS49323.1| LSU ribosomal protein L4p (L1e) [Lactobacillus rhamnosus LRHMDP3]
gi|411183056|gb|EKS50197.1| LSU ribosomal protein L4p (L1e) [Lactobacillus rhamnosus LRHMDP2]
Length = 207
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 76/119 (63%)
Query: 110 DKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGR 169
+ G + L ++ V ++++ V Q A +QGTH+ K S VSG G+KPWRQKGTGR
Sbjct: 13 ENGTVELNDAIWAVEPNENVVFDAVVMQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGR 72
Query: 170 ARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
AR G++R PQ+RGG + GP PRS+A KL KKVRRL +K LS + +G + + LS
Sbjct: 73 ARQGSIRSPQWRGGGIVFGPTPRSYAYKLPKKVRRLAIKSVLSQKVLDGDLVVVDGLSF 131
>gi|380300463|ref|ZP_09850156.1| 50S ribosomal protein L4 [Brachybacterium squillarum M-6-3]
Length = 237
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 83/132 (62%)
Query: 95 LHQDLVIPVTNFFNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEV 154
+ ++L + V + + G + L +FDV +IH+VV Q A +QGTH KT EV
Sbjct: 1 MAENLTVDVLDPAGKKSGTVELPASIFDVQTNIPLIHQVVVAQQAAARQGTHKAKTRGEV 60
Query: 155 SGTGKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSAR 214
G GKKP++QKGTGRAR G+LR PQF GG T+HGP PR +A + KK++ L+ ALS R
Sbjct: 61 RGGGKKPYKQKGTGRARQGSLRAPQFAGGGTVHGPVPRDYAQRTPKKMKAAALRGALSDR 120
Query: 215 AAEGKVSLSVSL 226
A G+V + +L
Sbjct: 121 ARNGRVHVVSAL 132
>gi|335356557|ref|ZP_08548427.1| 50S ribosomal protein L4 [Lactobacillus animalis KCTC 3501]
Length = 207
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 89/154 (57%), Gaps = 7/154 (4%)
Query: 101 IPVTNFFNED---KGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGT 157
+P FN+D G + L VF + + ++ V Q A +QGTH+ K S V G
Sbjct: 1 MPTVALFNQDGTQNGDVQLNDAVFGIEPNESVVFDAVIMQRASLRQGTHAVKNRSAVRGG 60
Query: 158 GKKPWRQKGTGRARHGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAE 217
G+KPWRQKGTGRAR G++R PQ+ GG T+ GP PRS+A KL +KVRRL ++ LS + +
Sbjct: 61 GRKPWRQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYAYKLPRKVRRLAIRSVLSQKVLD 120
Query: 218 GKVSLSVSLSLFLRP---SFSLSLKNTDTHVHIV 248
+ + +L+ F P +F+ L N D ++
Sbjct: 121 NSLVVVETLN-FDAPKTKAFAEVLNNLDVKSKVL 153
>gi|22547140|ref|NP_666500.1| 39S ribosomal protein L4, mitochondrial isoform b [Homo sapiens]
gi|12653925|gb|AAH00756.1| Mitochondrial ribosomal protein L4 [Homo sapiens]
gi|119604491|gb|EAW84085.1| mitochondrial ribosomal protein L4, isoform CRA_b [Homo sapiens]
Length = 263
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
Query: 52 SGLSFLASRKFSTTILTPDSSEGAFPSDLLLKKTVLTPDITIGLHQDLVIPVTNFFNEDK 111
GLS LA T + P +L K + P + Q V + F E
Sbjct: 19 QGLSSLAEEAARATENPEQVASEGLPEPVLRKVELPVPTHRRPV-QAWVESLRGFEQERV 77
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G L DVF R DI+H+V WQ ++ TKT +EV G G+KPW QKGTGRAR
Sbjct: 78 GLADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRAR 137
Query: 172 HGTLRGPQFRGGTTMHGPK-PRSHAIKLNKKVRRLGLKIALSARAAEGKVSLSVSLSL 228
HG++R P +RGG HGP+ P S+ L KVR LGLK+AL+ + A+ + + SL L
Sbjct: 138 HGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLAQDDLHIMDSLEL 195
>gi|49484465|ref|YP_041689.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257423734|ref|ZP_05600163.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257426412|ref|ZP_05602814.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429051|ref|ZP_05605438.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
68-397]
gi|257434658|ref|ZP_05610709.1| LSU ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
M876]
gi|282902152|ref|ZP_06310045.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus C160]
gi|282906592|ref|ZP_06314440.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282909562|ref|ZP_06317373.1| ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911809|ref|ZP_06319605.1| ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282915098|ref|ZP_06322875.1| ribosomal protein L4 [Staphylococcus aureus subsp. aureus M899]
gi|282920824|ref|ZP_06328542.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
C427]
gi|282925729|ref|ZP_06333377.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
C101]
gi|283959027|ref|ZP_06376468.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus A017934/97]
gi|293497502|ref|ZP_06665356.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
58-424]
gi|293511077|ref|ZP_06669774.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
M809]
gi|293549683|ref|ZP_06672355.1| ribosomal protein L4 [Staphylococcus aureus subsp. aureus M1015]
gi|295428832|ref|ZP_06821456.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297589682|ref|ZP_06948323.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus MN8]
gi|384866835|ref|YP_005747031.1| 50S ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus TCH60]
gi|415684499|ref|ZP_11449608.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CGS00]
gi|417888305|ref|ZP_12532419.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21195]
gi|418564038|ref|ZP_13128463.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21264]
gi|418580210|ref|ZP_13144296.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418595662|ref|ZP_13159260.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21342]
gi|418601385|ref|ZP_13164821.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21345]
gi|418890049|ref|ZP_13444175.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1176]
gi|418895900|ref|ZP_13449978.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418898837|ref|ZP_13452901.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418907220|ref|ZP_13461238.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG149]
gi|418915376|ref|ZP_13469341.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1267]
gi|418921117|ref|ZP_13475041.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418983198|ref|ZP_13530900.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418984026|ref|ZP_13531721.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1500]
gi|56749402|sp|Q6GEI4.1|RL4_STAAR RecName: Full=50S ribosomal protein L4
gi|49242594|emb|CAG41315.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257272752|gb|EEV04854.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276043|gb|EEV07494.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279532|gb|EEV10119.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
68-397]
gi|257285254|gb|EEV15370.1| LSU ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
M876]
gi|282312558|gb|EFB42962.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
C101]
gi|282315239|gb|EFB45623.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
C427]
gi|282320819|gb|EFB51153.1| ribosomal protein L4 [Staphylococcus aureus subsp. aureus M899]
gi|282323505|gb|EFB53821.1| ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326541|gb|EFB56843.1| ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329491|gb|EFB59012.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596611|gb|EFC01570.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus C160]
gi|283788619|gb|EFC27446.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus A017934/97]
gi|290918730|gb|EFD95806.1| ribosomal protein L4 [Staphylococcus aureus subsp. aureus M1015]
gi|291096433|gb|EFE26691.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
58-424]
gi|291466064|gb|EFF08593.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
M809]
gi|295127181|gb|EFG56823.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297578193|gb|EFH96906.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus MN8]
gi|312437340|gb|ADQ76411.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus TCH60]
gi|315193501|gb|EFU23897.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CGS00]
gi|341856138|gb|EGS96981.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21195]
gi|371977138|gb|EHO94416.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21264]
gi|374398851|gb|EHQ70005.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21345]
gi|374400763|gb|EHQ71869.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21342]
gi|377702076|gb|EHT26401.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377707622|gb|EHT31914.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377709625|gb|EHT33877.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377713402|gb|EHT37610.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377737220|gb|EHT61230.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377739240|gb|EHT63246.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377753203|gb|EHT77120.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1267]
gi|377760050|gb|EHT83929.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG149]
gi|377763769|gb|EHT87623.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC341D]
Length = 207
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 73/111 (65%)
Query: 112 GFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 171
G + L+ VF + ++ + Q A +QGTH+ K S VSG G+KPW+QKGTGRAR
Sbjct: 15 GSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPWKQKGTGRAR 74
Query: 172 HGTLRGPQFRGGTTMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKVSL 222
GT+R PQ+RGG + GP PRS+A K+ KK+RRL L+ ALS + E +++
Sbjct: 75 QGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENGLTV 125
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,884,152,288
Number of Sequences: 23463169
Number of extensions: 161297098
Number of successful extensions: 314275
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3303
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 310338
Number of HSP's gapped (non-prelim): 3401
length of query: 251
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 112
effective length of database: 9,097,814,876
effective search space: 1018955266112
effective search space used: 1018955266112
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)