Query 025563
Match_columns 251
No_of_seqs 137 out of 1210
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 12:51:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025563.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025563hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vc3_A Beta-cyanoalnine syntha 100.0 7.2E-56 2.5E-60 396.8 23.9 232 15-246 24-255 (344)
2 3tbh_A O-acetyl serine sulfhyd 100.0 1E-54 3.5E-59 388.0 24.4 235 10-245 5-239 (334)
3 4aec_A Cysteine synthase, mito 100.0 5.1E-54 1.7E-58 393.0 23.8 231 16-246 113-343 (430)
4 1z7w_A Cysteine synthase; tran 100.0 4.8E-53 1.6E-57 375.4 25.5 229 16-244 5-233 (322)
5 2q3b_A Cysteine synthase A; py 100.0 6E-52 2E-56 367.0 26.2 229 16-245 6-234 (313)
6 3dwg_A Cysteine synthase B; su 100.0 5.9E-52 2E-56 368.9 24.5 221 16-245 5-232 (325)
7 1ve1_A O-acetylserine sulfhydr 100.0 1.1E-51 3.8E-56 363.9 24.8 225 20-245 3-228 (304)
8 2v03_A Cysteine synthase B; py 100.0 2.5E-51 8.6E-56 361.5 26.6 219 18-245 2-220 (303)
9 2egu_A Cysteine synthase; O-ac 100.0 5.5E-52 1.9E-56 366.4 20.3 227 17-245 5-231 (308)
10 1y7l_A O-acetylserine sulfhydr 100.0 8.7E-52 3E-56 366.4 21.4 226 17-245 4-237 (316)
11 2pqm_A Cysteine synthase; OASS 100.0 1.7E-51 5.8E-56 368.4 23.4 228 16-245 13-245 (343)
12 3l6b_A Serine racemase; pyrido 100.0 4.2E-51 1.4E-55 366.2 19.9 215 4-224 3-217 (346)
13 1o58_A O-acetylserine sulfhydr 100.0 3.8E-50 1.3E-54 354.0 22.0 219 19-245 13-232 (303)
14 1jbq_A B, cystathionine beta-s 100.0 3.6E-49 1.2E-53 362.3 25.6 229 16-245 98-336 (435)
15 3pc3_A CG1753, isoform A; CBS, 100.0 1.9E-49 6.5E-54 373.5 23.5 236 10-246 44-289 (527)
16 2gn0_A Threonine dehydratase c 100.0 5.3E-50 1.8E-54 358.6 16.6 229 3-240 17-254 (342)
17 1v71_A Serine racemase, hypoth 100.0 6.7E-50 2.3E-54 355.3 14.1 232 1-241 1-241 (323)
18 1ve5_A Threonine deaminase; ri 100.0 2.6E-49 8.9E-54 349.7 16.3 208 7-225 1-211 (311)
19 4h27_A L-serine dehydratase/L- 100.0 1.4E-48 4.7E-53 352.1 20.2 218 18-243 38-265 (364)
20 1p5j_A L-serine dehydratase; l 100.0 7.1E-48 2.4E-52 348.3 21.5 229 4-243 27-265 (372)
21 2rkb_A Serine dehydratase-like 100.0 3.9E-47 1.3E-51 336.8 20.9 213 22-243 3-225 (318)
22 3aey_A Threonine synthase; PLP 100.0 2E-47 6.8E-52 343.0 18.2 227 5-241 4-245 (351)
23 2d1f_A Threonine synthase; ami 100.0 2.6E-47 9E-52 343.3 17.1 227 6-241 15-254 (360)
24 2zsj_A Threonine synthase; PLP 100.0 3.9E-47 1.3E-51 341.2 17.3 226 6-241 7-247 (352)
25 3ss7_X D-serine dehydratase; t 100.0 2.3E-46 7.8E-51 345.2 21.1 219 4-225 40-313 (442)
26 1tdj_A Biosynthetic threonine 100.0 7.3E-47 2.5E-51 352.0 16.3 206 9-225 16-221 (514)
27 1j0a_A 1-aminocyclopropane-1-c 100.0 2.6E-45 8.8E-50 326.1 19.4 209 11-225 6-223 (325)
28 3iau_A Threonine deaminase; py 100.0 5.2E-46 1.8E-50 335.6 14.8 198 19-225 53-250 (366)
29 4d9i_A Diaminopropionate ammon 100.0 4.7E-45 1.6E-49 332.7 20.4 230 9-241 25-289 (398)
30 4d9b_A D-cysteine desulfhydras 100.0 5.5E-45 1.9E-49 326.1 19.4 221 13-239 19-258 (342)
31 1f2d_A 1-aminocyclopropane-1-c 100.0 3.1E-45 1.1E-49 327.5 15.7 203 17-225 6-234 (341)
32 1wkv_A Cysteine synthase; homo 100.0 1.6E-43 5.5E-48 320.9 20.3 196 24-225 94-294 (389)
33 1tzj_A ACC deaminase, 1-aminoc 100.0 2.2E-43 7.6E-48 315.0 14.9 200 17-225 6-231 (338)
34 1x1q_A Tryptophan synthase bet 100.0 1.5E-42 5.2E-47 317.9 19.3 217 2-222 38-285 (418)
35 1qop_B Tryptophan synthase bet 100.0 2.5E-42 8.4E-47 314.5 18.6 216 2-222 16-260 (396)
36 1v8z_A Tryptophan synthase bet 100.0 1.1E-41 3.7E-46 309.4 20.5 214 4-222 13-256 (388)
37 2o2e_A Tryptophan synthase bet 100.0 1.2E-40 4E-45 305.5 19.5 215 2-221 42-286 (422)
38 1e5x_A Threonine synthase; thr 100.0 1.6E-40 5.6E-45 309.2 19.1 213 20-240 124-360 (486)
39 1vb3_A Threonine synthase; PLP 100.0 1.4E-33 4.9E-38 258.9 18.7 181 25-221 82-277 (428)
40 1kl7_A Threonine synthase; thr 100.0 3E-31 1E-35 247.5 19.7 191 23-225 93-309 (514)
41 4f4f_A Threonine synthase; str 100.0 9.4E-31 3.2E-35 241.5 19.5 183 26-225 93-292 (468)
42 3v7n_A Threonine synthase; ssg 100.0 1.8E-29 6.3E-34 233.2 21.6 187 27-225 103-306 (487)
43 3fwz_A Inner membrane protein 95.2 0.44 1.5E-05 35.6 12.0 49 81-132 10-58 (140)
44 1vp8_A Hypothetical protein AF 93.4 0.75 2.6E-05 36.9 10.0 77 51-133 22-107 (201)
45 4a2c_A Galactitol-1-phosphate 92.6 1.3 4.4E-05 38.1 11.5 65 68-135 152-216 (346)
46 3s2e_A Zinc-containing alcohol 92.1 1.7 6E-05 37.2 11.7 62 67-132 157-218 (340)
47 3jyn_A Quinone oxidoreductase; 92.1 1.1 3.9E-05 38.2 10.4 59 70-131 134-192 (325)
48 1kol_A Formaldehyde dehydrogen 91.9 1.7 6E-05 38.2 11.7 58 68-128 177-234 (398)
49 3qwb_A Probable quinone oxidor 91.8 1.7 5.9E-05 37.2 11.3 60 70-132 142-201 (334)
50 4dup_A Quinone oxidoreductase; 91.1 1.9 6.5E-05 37.3 10.9 60 70-132 161-220 (353)
51 4b7c_A Probable oxidoreductase 90.9 2.5 8.7E-05 36.1 11.4 59 70-131 143-202 (336)
52 4ej6_A Putative zinc-binding d 90.5 2 6.8E-05 37.6 10.5 61 68-131 174-234 (370)
53 3uog_A Alcohol dehydrogenase; 90.5 2.7 9.2E-05 36.5 11.3 57 70-130 183-239 (363)
54 2c0c_A Zinc binding alcohol de 90.1 2.7 9.4E-05 36.5 11.0 59 70-131 157-215 (362)
55 3fpc_A NADP-dependent alcohol 90.0 1.8 6.2E-05 37.4 9.7 59 68-130 158-217 (352)
56 3tqh_A Quinone oxidoreductase; 89.9 2.2 7.6E-05 36.3 10.1 60 68-131 144-203 (321)
57 3gqv_A Enoyl reductase; medium 89.8 1.3 4.4E-05 38.8 8.7 53 75-131 163-215 (371)
58 4eye_A Probable oxidoreductase 89.7 1.9 6.4E-05 37.2 9.5 59 70-131 153-211 (342)
59 3gaz_A Alcohol dehydrogenase s 89.7 2.9 9.8E-05 36.0 10.7 54 70-127 144-197 (343)
60 3l9w_A Glutathione-regulated p 89.4 3.4 0.00012 37.0 11.2 50 81-133 7-56 (413)
61 3gms_A Putative NADPH:quinone 89.2 2 6.7E-05 37.0 9.3 61 69-132 137-197 (340)
62 1f8f_A Benzyl alcohol dehydrog 88.2 4.1 0.00014 35.3 10.8 59 70-131 184-242 (371)
63 3ip1_A Alcohol dehydrogenase, 87.9 3.2 0.00011 36.6 10.0 57 73-132 210-266 (404)
64 1v3u_A Leukotriene B4 12- hydr 87.8 6.4 0.00022 33.5 11.6 57 70-129 139-195 (333)
65 4gkb_A 3-oxoacyl-[acyl-carrier 87.8 2.5 8.5E-05 35.3 8.7 73 77-150 7-81 (258)
66 2j8z_A Quinone oxidoreductase; 87.8 4.7 0.00016 34.8 10.8 58 70-130 156-213 (354)
67 3c85_A Putative glutathione-re 87.7 7.9 0.00027 29.7 12.7 49 81-132 42-91 (183)
68 3pi7_A NADH oxidoreductase; gr 87.6 2.8 9.4E-05 36.2 9.2 52 78-132 166-217 (349)
69 3iup_A Putative NADPH:quinone 87.5 4 0.00014 35.7 10.3 54 76-132 170-224 (379)
70 3fbg_A Putative arginate lyase 87.4 6.2 0.00021 33.9 11.3 52 76-130 150-201 (346)
71 1t57_A Conserved protein MTH16 87.2 2.7 9.3E-05 33.7 8.0 76 51-133 30-114 (206)
72 1yb5_A Quinone oxidoreductase; 87.2 7.6 0.00026 33.5 11.8 56 71-129 165-220 (351)
73 2eih_A Alcohol dehydrogenase; 87.1 5.3 0.00018 34.2 10.7 58 68-128 157-215 (343)
74 1pqw_A Polyketide synthase; ro 86.9 6.7 0.00023 30.4 10.5 55 71-128 33-87 (198)
75 1zsy_A Mitochondrial 2-enoyl t 86.9 3.6 0.00012 35.6 9.5 60 70-129 161-221 (357)
76 1h2b_A Alcohol dehydrogenase; 86.6 7.5 0.00026 33.6 11.5 56 72-131 182-238 (359)
77 1jvb_A NAD(H)-dependent alcoho 86.6 6.7 0.00023 33.6 11.1 60 68-130 162-222 (347)
78 1wly_A CAAR, 2-haloacrylate re 86.3 5.9 0.0002 33.7 10.5 56 71-129 140-195 (333)
79 1e3j_A NADP(H)-dependent ketos 86.0 5.7 0.00019 34.2 10.4 57 69-129 161-217 (352)
80 1gu7_A Enoyl-[acyl-carrier-pro 86.0 3.6 0.00012 35.6 9.0 58 72-129 162-221 (364)
81 1qor_A Quinone oxidoreductase; 85.9 6.7 0.00023 33.2 10.6 56 71-129 135-190 (327)
82 2hcy_A Alcohol dehydrogenase 1 85.8 7.9 0.00027 33.2 11.1 59 68-129 161-219 (347)
83 3uko_A Alcohol dehydrogenase c 85.5 4 0.00014 35.6 9.1 57 70-129 187-243 (378)
84 2d8a_A PH0655, probable L-thre 85.3 7.6 0.00026 33.3 10.8 57 68-129 160-217 (348)
85 2zb4_A Prostaglandin reductase 85.2 9.6 0.00033 32.7 11.4 57 70-129 152-212 (357)
86 3krt_A Crotonyl COA reductase; 85.2 2.3 8E-05 38.2 7.7 57 72-131 224-280 (456)
87 1vj0_A Alcohol dehydrogenase, 85.0 5.2 0.00018 34.9 9.7 58 68-129 186-245 (380)
88 3goh_A Alcohol dehydrogenase, 84.8 1.7 5.8E-05 36.9 6.2 58 67-129 133-190 (315)
89 2q2v_A Beta-D-hydroxybutyrate 84.7 7 0.00024 31.8 9.8 72 77-149 4-76 (255)
90 2dph_A Formaldehyde dismutase; 84.6 8.1 0.00028 33.9 10.8 57 68-128 177-234 (398)
91 3two_A Mannitol dehydrogenase; 84.3 4.1 0.00014 35.0 8.6 58 68-129 168-225 (348)
92 3l6u_A ABC-type sugar transpor 84.2 15 0.00053 29.8 16.0 91 126-220 137-231 (293)
93 2vn8_A Reticulon-4-interacting 84.1 5.9 0.0002 34.4 9.6 55 74-132 181-235 (375)
94 4fn4_A Short chain dehydrogena 84.1 4.1 0.00014 33.9 8.1 74 77-150 7-82 (254)
95 3h7a_A Short chain dehydrogena 84.0 9.4 0.00032 31.1 10.3 73 77-149 7-81 (252)
96 3u0b_A Oxidoreductase, short c 83.8 24 0.00082 31.7 15.2 73 77-150 213-285 (454)
97 4a0s_A Octenoyl-COA reductase/ 83.7 3.9 0.00013 36.6 8.4 55 72-129 216-270 (447)
98 1p0f_A NADP-dependent alcohol 83.6 6.1 0.00021 34.3 9.5 57 70-129 185-241 (373)
99 3gem_A Short chain dehydrogena 83.4 7.4 0.00025 32.0 9.5 70 78-150 28-97 (260)
100 1rjw_A ADH-HT, alcohol dehydro 83.4 11 0.00036 32.2 10.8 53 73-129 161-213 (339)
101 3uf0_A Short-chain dehydrogena 83.3 8 0.00027 32.0 9.7 66 77-142 31-97 (273)
102 2j3h_A NADP-dependent oxidored 83.3 11 0.00036 32.2 10.8 57 70-129 149-206 (345)
103 1e3i_A Alcohol dehydrogenase, 83.0 7.6 0.00026 33.7 9.9 57 70-129 189-245 (376)
104 1c1d_A L-phenylalanine dehydro 82.5 5.5 0.00019 34.9 8.6 66 59-128 155-222 (355)
105 3e03_A Short chain dehydrogena 82.4 12 0.0004 30.9 10.4 73 77-149 6-87 (274)
106 4eez_A Alcohol dehydrogenase 1 82.4 12 0.00042 31.7 10.9 62 68-133 155-217 (348)
107 3ek2_A Enoyl-(acyl-carrier-pro 81.9 7.1 0.00024 31.8 8.8 73 77-150 14-90 (271)
108 4g81_D Putative hexonate dehyd 81.8 5.1 0.00018 33.3 7.8 74 77-150 9-84 (255)
109 1cdo_A Alcohol dehydrogenase; 81.7 9.7 0.00033 33.0 10.0 57 70-129 186-242 (374)
110 3tfo_A Putative 3-oxoacyl-(acy 81.6 21 0.00071 29.3 15.4 72 78-149 5-78 (264)
111 2jhf_A Alcohol dehydrogenase E 81.5 9.5 0.00033 33.0 9.9 57 70-129 185-241 (374)
112 3r1i_A Short-chain type dehydr 81.4 8.9 0.0003 31.8 9.3 73 77-149 32-106 (276)
113 3nrc_A Enoyl-[acyl-carrier-pro 81.4 8.5 0.00029 31.8 9.2 71 78-150 27-101 (280)
114 1pl8_A Human sorbitol dehydrog 81.2 7 0.00024 33.7 8.8 59 68-129 163-221 (356)
115 3ucx_A Short chain dehydrogena 80.8 9.5 0.00033 31.2 9.2 74 77-150 11-86 (264)
116 3edm_A Short chain dehydrogena 80.7 11 0.00036 30.8 9.5 74 77-150 8-84 (259)
117 3kvo_A Hydroxysteroid dehydrog 80.7 13 0.00046 32.0 10.5 73 77-149 45-126 (346)
118 3qiv_A Short-chain dehydrogena 80.5 8.4 0.00029 31.1 8.7 73 77-149 9-83 (253)
119 3lyl_A 3-oxoacyl-(acyl-carrier 80.4 9.2 0.00031 30.7 8.9 74 77-150 5-80 (247)
120 1iz0_A Quinone oxidoreductase; 80.3 5 0.00017 33.7 7.4 55 71-129 121-175 (302)
121 3ijr_A Oxidoreductase, short c 80.3 9.3 0.00032 31.9 9.1 73 77-149 47-122 (291)
122 2b5w_A Glucose dehydrogenase; 80.2 5.6 0.00019 34.3 7.9 50 78-128 174-226 (357)
123 3oig_A Enoyl-[acyl-carrier-pro 79.7 14 0.00049 29.9 10.0 72 77-149 7-84 (266)
124 3tpf_A Otcase, ornithine carba 79.6 10 0.00034 32.6 9.1 62 70-131 139-206 (307)
125 3ezl_A Acetoacetyl-COA reducta 79.6 9.6 0.00033 30.8 8.8 74 77-150 13-89 (256)
126 3grk_A Enoyl-(acyl-carrier-pro 79.5 6.9 0.00024 32.8 8.0 73 77-150 31-107 (293)
127 3zu3_A Putative reductase YPO4 79.5 34 0.0011 30.5 13.5 99 50-150 21-135 (405)
128 2cdc_A Glucose dehydrogenase g 79.3 7.6 0.00026 33.6 8.5 51 77-128 181-231 (366)
129 4fc7_A Peroxisomal 2,4-dienoyl 79.2 17 0.00059 29.8 10.4 32 78-109 28-59 (277)
130 1xa0_A Putative NADPH dependen 79.1 4.5 0.00015 34.4 6.8 57 70-129 142-199 (328)
131 3s55_A Putative short-chain de 79.0 6.6 0.00023 32.4 7.7 73 77-149 10-96 (281)
132 2fzw_A Alcohol dehydrogenase c 78.9 9.8 0.00033 32.9 9.1 57 70-129 184-240 (373)
133 3u5t_A 3-oxoacyl-[acyl-carrier 78.9 14 0.00048 30.3 9.7 73 78-150 28-103 (267)
134 1yb1_A 17-beta-hydroxysteroid 78.7 12 0.0004 30.7 9.2 74 77-150 31-106 (272)
135 2ew8_A (S)-1-phenylethanol deh 78.3 17 0.0006 29.2 10.0 71 77-148 7-78 (249)
136 3is3_A 17BETA-hydroxysteroid d 78.2 12 0.0004 30.8 9.0 73 77-149 18-93 (270)
137 3v2g_A 3-oxoacyl-[acyl-carrier 78.1 14 0.00047 30.5 9.4 74 77-150 31-107 (271)
138 3sc4_A Short chain dehydrogena 77.9 16 0.00055 30.2 9.9 73 77-149 9-90 (285)
139 1sby_A Alcohol dehydrogenase; 77.9 17 0.00057 29.3 9.8 70 77-148 5-80 (254)
140 3awd_A GOX2181, putative polyo 77.6 12 0.0004 30.2 8.8 72 77-148 13-86 (260)
141 2ae2_A Protein (tropinone redu 77.6 15 0.0005 29.8 9.4 73 77-149 9-83 (260)
142 1piw_A Hypothetical zinc-type 77.5 7.6 0.00026 33.5 7.9 58 68-129 171-228 (360)
143 3afn_B Carbonyl reductase; alp 77.5 17 0.00059 29.0 9.7 71 78-148 8-81 (258)
144 2rhc_B Actinorhodin polyketide 77.4 13 0.00045 30.6 9.1 73 78-150 23-97 (277)
145 3llv_A Exopolyphosphatase-rela 77.4 9 0.00031 27.9 7.3 49 81-132 9-57 (141)
146 1tt7_A YHFP; alcohol dehydroge 77.4 4.7 0.00016 34.3 6.4 57 70-129 143-200 (330)
147 1uuf_A YAHK, zinc-type alcohol 77.3 8.8 0.0003 33.3 8.3 58 69-130 187-244 (369)
148 3qlj_A Short chain dehydrogena 77.3 13 0.00043 31.5 9.1 73 77-149 27-111 (322)
149 2c07_A 3-oxoacyl-(acyl-carrier 77.1 8.1 0.00028 32.0 7.7 74 77-150 44-119 (285)
150 3tjr_A Short chain dehydrogena 77.0 12 0.0004 31.4 8.8 73 77-149 31-105 (301)
151 3a28_C L-2.3-butanediol dehydr 77.0 11 0.00038 30.6 8.4 72 78-149 3-78 (258)
152 4iin_A 3-ketoacyl-acyl carrier 76.9 12 0.00042 30.6 8.7 73 77-149 29-104 (271)
153 3jv7_A ADH-A; dehydrogenase, n 76.8 16 0.00056 31.0 9.8 55 73-131 168-223 (345)
154 3oid_A Enoyl-[acyl-carrier-pro 76.7 13 0.00045 30.3 8.8 73 77-149 4-79 (258)
155 1g0o_A Trihydroxynaphthalene r 76.7 12 0.00041 30.8 8.7 71 78-148 30-103 (283)
156 4ekn_B Aspartate carbamoyltran 76.7 8.9 0.0003 32.9 7.9 59 71-131 146-210 (306)
157 4eue_A Putative reductase CA_C 76.5 41 0.0014 29.9 13.0 99 50-150 35-149 (418)
158 4da9_A Short-chain dehydrogena 76.3 7.9 0.00027 32.1 7.4 73 77-149 29-104 (280)
159 4ibo_A Gluconate dehydrogenase 76.3 9.5 0.00032 31.5 7.9 74 77-150 26-101 (271)
160 3tzq_B Short-chain type dehydr 76.2 24 0.00082 28.8 10.4 70 77-149 11-82 (271)
161 4imr_A 3-oxoacyl-(acyl-carrier 76.1 16 0.00053 30.2 9.2 69 78-146 34-104 (275)
162 3rkr_A Short chain oxidoreduct 75.9 13 0.00045 30.2 8.6 72 78-149 30-103 (262)
163 3ksu_A 3-oxoacyl-acyl carrier 75.9 15 0.00051 30.0 9.0 74 77-150 11-89 (262)
164 1geg_A Acetoin reductase; SDR 75.9 15 0.00052 29.7 9.0 73 78-150 3-77 (256)
165 3v2h_A D-beta-hydroxybutyrate 75.8 32 0.0011 28.3 11.8 73 78-150 26-102 (281)
166 2jah_A Clavulanic acid dehydro 75.8 14 0.00049 29.7 8.8 72 77-148 7-80 (247)
167 4e3z_A Putative oxidoreductase 75.8 15 0.00052 30.0 9.0 72 78-149 27-101 (272)
168 3gaf_A 7-alpha-hydroxysteroid 75.8 11 0.00036 30.8 8.0 73 77-149 12-86 (256)
169 4iiu_A 3-oxoacyl-[acyl-carrier 75.7 13 0.00045 30.3 8.6 72 78-149 27-101 (267)
170 4dmm_A 3-oxoacyl-[acyl-carrier 75.6 14 0.00046 30.4 8.7 73 77-149 28-103 (269)
171 3osu_A 3-oxoacyl-[acyl-carrier 75.4 14 0.00047 29.8 8.5 72 78-149 5-79 (246)
172 3imf_A Short chain dehydrogena 75.4 6.4 0.00022 32.1 6.5 73 77-149 6-80 (257)
173 3sju_A Keto reductase; short-c 75.3 13 0.00043 30.8 8.4 72 78-149 25-98 (279)
174 3o26_A Salutaridine reductase; 75.2 33 0.0011 28.1 15.6 71 78-149 13-88 (311)
175 3gxh_A Putative phosphatase (D 75.2 24 0.00082 26.5 9.5 25 168-194 84-108 (157)
176 2hq1_A Glucose/ribitol dehydro 75.2 16 0.00055 29.1 8.9 71 78-148 6-79 (247)
177 3icc_A Putative 3-oxoacyl-(acy 75.0 22 0.00075 28.5 9.7 56 77-132 7-64 (255)
178 2r6j_A Eugenol synthase 1; phe 74.9 17 0.00059 30.2 9.3 54 79-132 13-67 (318)
179 1sny_A Sniffer CG10964-PA; alp 74.8 11 0.00037 30.6 7.8 53 78-130 22-77 (267)
180 2gas_A Isoflavone reductase; N 74.6 12 0.0004 31.0 8.1 55 79-133 4-65 (307)
181 3qk7_A Transcriptional regulat 74.4 34 0.0012 27.9 17.6 45 173-220 178-226 (294)
182 1edo_A Beta-keto acyl carrier 74.3 18 0.00061 28.7 8.9 73 78-150 2-77 (244)
183 3sx2_A Putative 3-ketoacyl-(ac 74.2 10 0.00034 31.2 7.5 73 77-149 13-99 (278)
184 3t7c_A Carveol dehydrogenase; 73.8 13 0.00044 31.1 8.1 73 77-149 28-114 (299)
185 3r3s_A Oxidoreductase; structu 73.7 14 0.00047 30.8 8.3 73 77-149 49-125 (294)
186 3cxt_A Dehydrogenase with diff 73.5 15 0.00052 30.6 8.6 73 77-150 34-109 (291)
187 4ep1_A Otcase, ornithine carba 73.5 13 0.00045 32.3 8.2 60 71-131 174-239 (340)
188 3v8b_A Putative dehydrogenase, 73.3 14 0.00047 30.7 8.2 72 78-149 29-102 (283)
189 3s8m_A Enoyl-ACP reductase; ro 73.3 21 0.00071 32.0 9.7 98 51-150 36-149 (422)
190 3i6i_A Putative leucoanthocyan 73.2 18 0.00062 30.5 9.1 55 79-133 12-70 (346)
191 3pgx_A Carveol dehydrogenase; 73.0 13 0.00044 30.6 7.9 74 77-150 15-103 (280)
192 1uls_A Putative 3-oxoacyl-acyl 72.9 32 0.0011 27.6 10.2 68 78-149 6-74 (245)
193 1vlv_A Otcase, ornithine carba 72.7 16 0.00056 31.5 8.6 60 71-132 162-229 (325)
194 3i1j_A Oxidoreductase, short c 72.7 34 0.0012 27.2 11.9 33 77-109 14-46 (247)
195 1pvv_A Otcase, ornithine carba 72.6 16 0.00055 31.4 8.5 60 71-131 150-215 (315)
196 4dvj_A Putative zinc-dependent 72.6 28 0.00097 29.9 10.3 52 76-130 171-223 (363)
197 1ae1_A Tropinone reductase-I; 72.5 20 0.0007 29.3 9.0 73 77-149 21-95 (273)
198 3l77_A Short-chain alcohol deh 72.4 34 0.0011 27.0 14.1 71 78-148 3-76 (235)
199 3tpc_A Short chain alcohol deh 72.4 22 0.00076 28.7 9.2 70 77-149 7-78 (257)
200 2i6u_A Otcase, ornithine carba 72.2 17 0.00057 31.2 8.5 60 70-131 142-209 (307)
201 4fgs_A Probable dehydrogenase 72.1 18 0.00062 30.2 8.6 71 77-150 29-101 (273)
202 3op4_A 3-oxoacyl-[acyl-carrier 72.1 12 0.00041 30.2 7.4 70 77-150 9-81 (248)
203 1qsg_A Enoyl-[acyl-carrier-pro 72.1 37 0.0013 27.4 10.8 72 78-150 10-85 (265)
204 3kzv_A Uncharacterized oxidore 72.0 37 0.0013 27.3 13.4 69 78-149 3-75 (254)
205 1zem_A Xylitol dehydrogenase; 71.9 18 0.00061 29.4 8.5 73 77-149 7-81 (262)
206 3nx4_A Putative oxidoreductase 71.8 9.9 0.00034 32.1 7.0 49 79-130 149-197 (324)
207 3l6e_A Oxidoreductase, short-c 71.8 17 0.00057 29.2 8.1 68 78-149 4-74 (235)
208 1ml4_A Aspartate transcarbamoy 71.7 19 0.00064 30.8 8.7 61 70-132 149-214 (308)
209 2pd4_A Enoyl-[acyl-carrier-pro 71.7 39 0.0013 27.5 11.1 72 78-150 7-82 (275)
210 2o23_A HADH2 protein; HSD17B10 71.7 31 0.0011 27.7 9.9 69 77-148 12-82 (265)
211 4e6p_A Probable sorbitol dehyd 71.6 19 0.00064 29.2 8.5 71 77-150 8-80 (259)
212 3uve_A Carveol dehydrogenase ( 71.4 15 0.0005 30.3 7.9 73 77-149 11-101 (286)
213 3svt_A Short-chain type dehydr 71.2 21 0.00072 29.3 8.9 73 77-149 11-88 (281)
214 3pxx_A Carveol dehydrogenase; 71.1 15 0.00052 30.0 8.0 73 77-149 10-96 (287)
215 3tsc_A Putative oxidoreductase 71.0 17 0.00057 29.9 8.1 74 77-150 11-99 (277)
216 3l4b_C TRKA K+ channel protien 71.0 36 0.0012 26.7 12.2 50 81-133 3-53 (218)
217 3o38_A Short chain dehydrogena 71.0 39 0.0013 27.2 11.0 32 78-109 23-55 (266)
218 1gee_A Glucose 1-dehydrogenase 70.9 19 0.00064 29.0 8.3 72 78-149 8-82 (261)
219 1ja9_A 4HNR, 1,3,6,8-tetrahydr 70.8 18 0.0006 29.3 8.2 72 78-149 22-96 (274)
220 1fmc_A 7 alpha-hydroxysteroid 70.7 15 0.00052 29.3 7.7 70 78-147 12-83 (255)
221 3csu_A Protein (aspartate carb 70.4 14 0.00047 31.7 7.5 59 71-131 149-213 (310)
222 2zat_A Dehydrogenase/reductase 70.4 19 0.00066 29.1 8.3 72 77-148 14-87 (260)
223 1vl8_A Gluconate 5-dehydrogena 70.2 20 0.00068 29.3 8.4 73 77-149 21-96 (267)
224 2p91_A Enoyl-[acyl-carrier-pro 70.1 33 0.0011 28.2 9.8 72 78-150 22-97 (285)
225 2uvd_A 3-oxoacyl-(acyl-carrier 70.1 18 0.00062 29.0 8.1 72 78-149 5-79 (246)
226 1duv_G Octase-1, ornithine tra 70.1 17 0.00059 31.5 8.1 54 77-131 155-216 (333)
227 3gdg_A Probable NADP-dependent 70.0 18 0.00062 29.3 8.1 73 78-150 21-99 (267)
228 3rot_A ABC sugar transporter, 70.0 43 0.0015 27.2 16.7 147 63-219 52-227 (297)
229 3n74_A 3-ketoacyl-(acyl-carrie 69.3 20 0.00067 28.9 8.2 70 77-149 9-80 (261)
230 3kkj_A Amine oxidase, flavin-c 69.3 5.3 0.00018 31.1 4.5 27 81-107 5-31 (336)
231 3ksm_A ABC-type sugar transpor 69.2 41 0.0014 26.7 18.2 149 63-220 49-224 (276)
232 3rih_A Short chain dehydrogena 69.0 20 0.00067 30.0 8.3 72 77-149 41-116 (293)
233 2qq5_A DHRS1, dehydrogenase/re 68.9 20 0.00069 29.0 8.1 72 77-148 5-78 (260)
234 3e8x_A Putative NAD-dependent 68.8 13 0.00044 29.5 6.8 52 78-132 22-74 (236)
235 3ged_A Short-chain dehydrogena 68.7 29 0.00098 28.5 9.0 70 78-150 3-73 (247)
236 1wma_A Carbonyl reductase [NAD 68.6 19 0.00064 29.0 7.9 72 77-149 4-79 (276)
237 3huu_A Transcription regulator 68.4 47 0.0016 27.1 17.4 36 182-219 201-240 (305)
238 2wyu_A Enoyl-[acyl carrier pro 68.4 38 0.0013 27.3 9.8 72 78-150 9-84 (261)
239 3pk0_A Short-chain dehydrogena 68.3 18 0.00061 29.5 7.7 73 77-149 10-85 (262)
240 1x1t_A D(-)-3-hydroxybutyrate 68.2 23 0.0008 28.6 8.4 72 77-148 4-79 (260)
241 2cf5_A Atccad5, CAD, cinnamyl 68.2 18 0.00063 31.0 8.1 57 69-129 172-230 (357)
242 3ctm_A Carbonyl reductase; alc 68.0 24 0.00081 28.8 8.5 71 78-148 35-107 (279)
243 4a27_A Synaptic vesicle membra 67.9 18 0.00063 30.8 8.0 56 70-130 136-192 (349)
244 2b4q_A Rhamnolipids biosynthes 67.9 21 0.00074 29.3 8.2 72 78-150 30-103 (276)
245 3slk_A Polyketide synthase ext 67.7 20 0.00069 34.7 9.0 74 75-148 528-608 (795)
246 3tox_A Short chain dehydrogena 67.6 14 0.00048 30.6 7.0 73 77-149 8-82 (280)
247 3oec_A Carveol dehydrogenase ( 67.6 17 0.00058 30.7 7.6 73 77-149 46-132 (317)
248 2h6e_A ADH-4, D-arabinose 1-de 67.6 19 0.00066 30.6 8.0 52 73-129 168-221 (344)
249 1w6u_A 2,4-dienoyl-COA reducta 67.5 26 0.00088 28.9 8.7 73 78-150 27-102 (302)
250 3rwb_A TPLDH, pyridoxal 4-dehy 67.5 30 0.001 27.8 8.9 71 77-149 6-77 (247)
251 1xg5_A ARPG836; short chain de 67.4 27 0.00094 28.5 8.7 71 78-148 33-107 (279)
252 1zmt_A Haloalcohol dehalogenas 67.3 11 0.00036 30.6 6.1 63 80-143 4-66 (254)
253 3ioy_A Short-chain dehydrogena 67.2 30 0.001 29.1 9.2 73 77-150 8-85 (319)
254 3ai3_A NADPH-sorbose reductase 66.6 27 0.00093 28.2 8.5 73 77-149 7-82 (263)
255 2w37_A Ornithine carbamoyltran 66.6 19 0.00064 31.6 7.7 59 71-131 171-237 (359)
256 4egf_A L-xylulose reductase; s 66.5 17 0.00057 29.8 7.1 73 77-149 20-95 (266)
257 4eso_A Putative oxidoreductase 66.4 25 0.00085 28.5 8.2 71 77-150 8-80 (255)
258 3h75_A Periplasmic sugar-bindi 66.1 58 0.002 27.2 15.8 92 125-220 146-244 (350)
259 2g1u_A Hypothetical protein TM 66.0 2.5 8.6E-05 31.8 1.8 46 81-129 22-68 (155)
260 3ftp_A 3-oxoacyl-[acyl-carrier 66.0 17 0.00056 29.9 7.1 72 77-149 28-102 (270)
261 3m1a_A Putative dehydrogenase; 65.9 17 0.0006 29.7 7.2 69 78-149 6-76 (281)
262 3m6i_A L-arabinitol 4-dehydrog 65.8 13 0.00043 32.0 6.5 58 68-128 171-228 (363)
263 3c1o_A Eugenol synthase; pheny 65.7 25 0.00087 29.1 8.3 54 79-132 6-65 (321)
264 3gvc_A Oxidoreductase, probabl 65.6 23 0.00078 29.2 7.9 69 78-149 30-100 (277)
265 3qp9_A Type I polyketide synth 65.4 28 0.00096 31.9 9.1 59 74-132 248-322 (525)
266 3gk3_A Acetoacetyl-COA reducta 65.4 21 0.00073 29.0 7.6 71 78-149 26-100 (269)
267 3k31_A Enoyl-(acyl-carrier-pro 65.3 25 0.00086 29.2 8.2 72 78-150 31-106 (296)
268 2d1y_A Hypothetical protein TT 65.3 45 0.0015 26.8 9.6 68 77-148 6-73 (256)
269 1iy8_A Levodione reductase; ox 65.3 28 0.00095 28.2 8.3 73 77-149 13-89 (267)
270 1yqd_A Sinapyl alcohol dehydro 65.2 27 0.00093 30.0 8.6 53 73-129 183-237 (366)
271 3f1l_A Uncharacterized oxidore 65.2 42 0.0014 27.0 9.3 74 77-150 12-90 (252)
272 2pnf_A 3-oxoacyl-[acyl-carrier 65.1 44 0.0015 26.3 9.4 73 77-149 7-82 (248)
273 3gd5_A Otcase, ornithine carba 65.0 25 0.00087 30.3 8.1 60 71-131 152-217 (323)
274 1xq1_A Putative tropinone redu 65.0 25 0.00086 28.3 8.0 70 77-146 14-85 (266)
275 1h5q_A NADP-dependent mannitol 64.7 52 0.0018 26.2 9.8 73 78-150 15-90 (265)
276 1x13_A NAD(P) transhydrogenase 64.5 12 0.0004 33.2 6.1 49 77-129 172-220 (401)
277 1leh_A Leucine dehydrogenase; 64.3 32 0.0011 30.0 8.9 65 59-127 152-220 (364)
278 4dqx_A Probable oxidoreductase 64.1 28 0.00095 28.7 8.2 70 78-149 28-98 (277)
279 2z1n_A Dehydrogenase; reductas 64.1 35 0.0012 27.5 8.7 73 77-150 7-84 (260)
280 3zv4_A CIS-2,3-dihydrobiphenyl 64.1 24 0.00081 29.1 7.7 70 77-149 5-76 (281)
281 2fwm_X 2,3-dihydro-2,3-dihydro 64.0 41 0.0014 26.9 9.1 66 77-150 7-72 (250)
282 1l7d_A Nicotinamide nucleotide 63.9 10 0.00035 33.2 5.6 49 76-128 171-219 (384)
283 1dxh_A Ornithine carbamoyltran 63.9 23 0.00079 30.7 7.7 54 77-131 155-216 (335)
284 2gk4_A Conserved hypothetical 63.6 12 0.0004 30.8 5.5 25 86-110 28-52 (232)
285 3ppi_A 3-hydroxyacyl-COA dehyd 63.6 31 0.0011 28.1 8.4 69 78-150 31-101 (281)
286 4hp8_A 2-deoxy-D-gluconate 3-d 63.6 24 0.00081 29.1 7.5 54 77-131 9-62 (247)
287 3ak4_A NADH-dependent quinucli 63.4 22 0.00076 28.7 7.3 69 77-149 12-83 (263)
288 2fr1_A Erythromycin synthase, 63.2 39 0.0013 30.5 9.5 59 74-132 223-286 (486)
289 4fn4_A Short chain dehydrogena 63.1 59 0.002 26.7 9.9 74 114-193 21-94 (254)
290 2bd0_A Sepiapterin reductase; 63.0 33 0.0011 27.1 8.3 73 78-150 3-84 (244)
291 3ew7_A LMO0794 protein; Q8Y8U8 63.0 49 0.0017 25.4 9.9 49 80-132 3-51 (221)
292 4dyv_A Short-chain dehydrogena 62.9 29 0.001 28.5 8.1 68 78-149 29-99 (272)
293 2z5l_A Tylkr1, tylactone synth 62.5 43 0.0015 30.6 9.7 59 74-132 256-319 (511)
294 3gyb_A Transcriptional regulat 62.5 58 0.002 26.0 10.2 117 100-220 78-215 (280)
295 4fcc_A Glutamate dehydrogenase 62.5 48 0.0017 29.9 9.8 50 58-108 215-265 (450)
296 3rss_A Putative uncharacterize 62.5 31 0.0011 31.5 8.7 51 78-128 53-110 (502)
297 3p19_A BFPVVD8, putative blue 62.4 31 0.001 28.2 8.1 69 78-150 17-85 (266)
298 3d4o_A Dipicolinate synthase s 62.4 51 0.0017 27.4 9.5 64 61-128 138-202 (293)
299 1xu9_A Corticosteroid 11-beta- 62.3 33 0.0011 28.1 8.3 71 78-148 29-102 (286)
300 1jzt_A Hypothetical 27.5 kDa p 62.2 56 0.0019 26.8 9.5 50 79-128 60-117 (246)
301 3hcw_A Maltose operon transcri 62.2 62 0.0021 26.2 16.4 46 172-219 179-230 (295)
302 3u9l_A 3-oxoacyl-[acyl-carrier 62.0 45 0.0015 28.2 9.3 72 78-149 6-84 (324)
303 2dq4_A L-threonine 3-dehydroge 61.8 46 0.0016 28.1 9.3 53 71-129 160-213 (343)
304 1nff_A Putative oxidoreductase 61.6 28 0.00096 28.2 7.6 33 77-109 7-39 (260)
305 1yxm_A Pecra, peroxisomal tran 61.5 41 0.0014 27.7 8.8 72 77-148 18-96 (303)
306 4fs3_A Enoyl-[acyl-carrier-pro 61.5 63 0.0022 26.1 10.0 73 77-150 6-84 (256)
307 3grp_A 3-oxoacyl-(acyl carrier 61.4 29 0.00098 28.4 7.7 70 77-149 27-98 (266)
308 3ce6_A Adenosylhomocysteinase; 61.2 29 0.001 31.7 8.3 97 72-196 269-365 (494)
309 3k4h_A Putative transcriptiona 60.7 64 0.0022 25.9 18.9 36 182-219 191-230 (292)
310 2ph3_A 3-oxoacyl-[acyl carrier 60.7 30 0.001 27.3 7.5 69 79-148 3-76 (245)
311 1tjy_A Sugar transport protein 60.2 71 0.0024 26.3 16.1 45 172-219 179-224 (316)
312 1xkq_A Short-chain reductase f 60.1 30 0.001 28.3 7.6 72 77-149 6-83 (280)
313 1qyd_A Pinoresinol-lariciresin 60.0 37 0.0013 27.9 8.2 54 79-132 6-64 (313)
314 1xhl_A Short-chain dehydrogena 59.6 32 0.0011 28.6 7.8 71 78-149 27-103 (297)
315 1qyc_A Phenylcoumaran benzylic 59.4 27 0.00091 28.7 7.2 54 79-132 6-65 (308)
316 3i4f_A 3-oxoacyl-[acyl-carrier 59.0 24 0.00083 28.4 6.8 72 78-149 8-82 (264)
317 1zq6_A Otcase, ornithine carba 58.9 27 0.00092 30.6 7.3 44 88-131 207-257 (359)
318 3hut_A Putative branched-chain 58.9 67 0.0023 26.7 9.9 131 81-221 76-231 (358)
319 2ekp_A 2-deoxy-D-gluconate 3-d 58.2 29 0.001 27.6 7.1 51 78-133 3-53 (239)
320 4g81_D Putative hexonate dehyd 58.2 76 0.0026 26.0 10.5 75 114-194 23-97 (255)
321 2wsb_A Galactitol dehydrogenas 58.1 46 0.0016 26.4 8.3 33 77-109 11-43 (254)
322 2ehd_A Oxidoreductase, oxidore 58.1 65 0.0022 25.2 9.5 67 78-148 6-74 (234)
323 2cfc_A 2-(R)-hydroxypropyl-COM 58.0 43 0.0015 26.5 8.1 32 78-109 3-34 (250)
324 3rku_A Oxidoreductase YMR226C; 58.0 39 0.0013 27.9 8.0 31 78-108 34-67 (287)
325 3o26_A Salutaridine reductase; 57.9 64 0.0022 26.3 9.4 75 114-194 26-102 (311)
326 2x9g_A PTR1, pteridine reducta 57.9 33 0.0011 28.1 7.6 54 78-131 24-80 (288)
327 4a8t_A Putrescine carbamoyltra 57.8 38 0.0013 29.3 8.0 55 77-131 175-235 (339)
328 3l49_A ABC sugar (ribose) tran 57.8 72 0.0025 25.6 20.8 150 62-220 51-227 (291)
329 2bgk_A Rhizome secoisolaricire 57.7 46 0.0016 26.8 8.3 33 77-109 16-48 (278)
330 3nyw_A Putative oxidoreductase 57.5 58 0.002 26.1 8.9 73 77-150 7-85 (250)
331 2fn9_A Ribose ABC transporter, 57.5 36 0.0012 27.4 7.7 78 138-219 148-226 (290)
332 4dio_A NAD(P) transhydrogenase 57.4 19 0.00065 32.1 6.1 48 80-130 192-239 (405)
333 3p2y_A Alanine dehydrogenase/p 57.3 17 0.00057 32.2 5.7 50 77-130 184-233 (381)
334 3lf2_A Short chain oxidoreduct 57.1 56 0.0019 26.4 8.8 72 77-149 8-84 (265)
335 2dtx_A Glucose 1-dehydrogenase 56.9 66 0.0023 26.0 9.2 63 78-149 9-71 (264)
336 3dii_A Short-chain dehydrogena 56.9 64 0.0022 25.7 9.0 68 78-149 3-72 (247)
337 1gud_A ALBP, D-allose-binding 56.7 58 0.002 26.3 8.9 92 125-220 134-230 (288)
338 3gg9_A D-3-phosphoglycerate de 56.4 45 0.0016 28.9 8.4 116 77-218 160-277 (352)
339 2wm3_A NMRA-like family domain 56.2 75 0.0026 25.8 9.5 55 78-133 6-61 (299)
340 4e4t_A Phosphoribosylaminoimid 56.0 67 0.0023 28.3 9.6 36 74-110 32-67 (419)
341 2et6_A (3R)-hydroxyacyl-COA de 55.9 73 0.0025 29.7 10.2 70 77-149 322-392 (604)
342 3d3k_A Enhancer of mRNA-decapp 55.9 85 0.0029 25.8 10.0 32 79-110 87-121 (259)
343 4a8p_A Putrescine carbamoyltra 55.8 42 0.0014 29.3 7.9 36 77-112 153-188 (355)
344 2nm0_A Probable 3-oxacyl-(acyl 55.6 49 0.0017 26.7 8.1 64 78-150 22-85 (253)
345 3o74_A Fructose transport syst 55.4 75 0.0026 25.1 17.7 46 172-219 169-217 (272)
346 3get_A Histidinol-phosphate am 55.3 49 0.0017 27.7 8.4 80 81-162 85-165 (365)
347 3mje_A AMPHB; rossmann fold, o 55.1 58 0.002 29.6 9.2 55 78-132 240-299 (496)
348 2pd6_A Estradiol 17-beta-dehyd 55.0 36 0.0012 27.2 7.2 33 77-109 7-39 (264)
349 2rir_A Dipicolinate synthase, 54.8 38 0.0013 28.3 7.4 49 76-128 156-204 (300)
350 1u7z_A Coenzyme A biosynthesis 54.8 18 0.0006 29.5 5.1 24 86-109 33-56 (226)
351 3f9i_A 3-oxoacyl-[acyl-carrier 54.7 31 0.0011 27.5 6.7 34 76-109 13-46 (249)
352 1wwk_A Phosphoglycerate dehydr 54.7 95 0.0033 26.1 11.7 106 77-207 142-249 (307)
353 1yde_A Retinal dehydrogenase/r 54.6 56 0.0019 26.5 8.4 69 77-149 9-79 (270)
354 2rjo_A Twin-arginine transloca 54.6 90 0.0031 25.7 14.7 95 123-220 134-234 (332)
355 3gbv_A Putative LACI-family tr 54.5 82 0.0028 25.3 13.5 45 172-220 190-235 (304)
356 1oth_A Protein (ornithine tran 54.5 26 0.0009 30.1 6.4 60 71-131 150-215 (321)
357 3d3j_A Enhancer of mRNA-decapp 54.4 51 0.0018 28.0 8.2 49 79-127 134-190 (306)
358 1hdc_A 3-alpha, 20 beta-hydrox 54.1 38 0.0013 27.2 7.2 69 77-149 5-76 (254)
359 3grf_A Ornithine carbamoyltran 54.1 52 0.0018 28.3 8.2 45 87-131 172-226 (328)
360 2a4k_A 3-oxoacyl-[acyl carrier 53.8 35 0.0012 27.7 7.0 69 77-149 6-77 (263)
361 3gdg_A Probable NADP-dependent 53.8 66 0.0022 25.8 8.6 77 114-194 36-112 (267)
362 1a3w_A Pyruvate kinase; allost 53.8 1E+02 0.0034 28.2 10.5 125 92-222 282-429 (500)
363 1hxh_A 3BETA/17BETA-hydroxyste 53.7 47 0.0016 26.6 7.7 70 77-149 6-77 (253)
364 2h7i_A Enoyl-[acyl-carrier-pro 53.5 41 0.0014 27.3 7.3 72 77-150 7-82 (269)
365 3m9w_A D-xylose-binding peripl 53.1 91 0.0031 25.4 14.3 46 172-219 177-224 (313)
366 1yo6_A Putative carbonyl reduc 53.1 24 0.00083 27.8 5.7 33 78-110 4-38 (250)
367 4fs3_A Enoyl-[acyl-carrier-pro 53.1 83 0.0028 25.3 9.2 74 114-194 22-97 (256)
368 3guy_A Short-chain dehydrogena 53.0 80 0.0027 24.7 11.9 48 80-130 4-52 (230)
369 3sds_A Ornithine carbamoyltran 53.0 52 0.0018 28.7 8.1 45 77-121 188-234 (353)
370 3orq_A N5-carboxyaminoimidazol 52.9 43 0.0015 28.9 7.7 34 76-110 11-44 (377)
371 2e7j_A SEP-tRNA:Cys-tRNA synth 52.9 41 0.0014 28.1 7.5 50 81-131 72-121 (371)
372 1mxh_A Pteridine reductase 2; 52.9 40 0.0014 27.3 7.2 32 78-109 12-43 (276)
373 4dry_A 3-oxoacyl-[acyl-carrier 52.9 37 0.0013 27.9 7.0 71 78-149 34-108 (281)
374 2dbq_A Glyoxylate reductase; D 52.8 99 0.0034 26.3 9.9 105 77-206 150-256 (334)
375 1zk4_A R-specific alcohol dehy 52.7 47 0.0016 26.3 7.5 33 77-109 6-38 (251)
376 4e12_A Diketoreductase; oxidor 52.7 95 0.0032 25.4 12.6 117 81-220 7-146 (283)
377 3aoe_E Glutamate dehydrogenase 52.6 70 0.0024 28.5 9.0 51 59-110 199-250 (419)
378 3ged_A Short-chain dehydrogena 52.5 90 0.0031 25.4 9.2 71 114-194 16-86 (247)
379 3jy6_A Transcriptional regulat 52.2 88 0.003 24.9 14.9 37 182-220 180-220 (276)
380 4egf_A L-xylulose reductase; s 52.1 65 0.0022 26.0 8.4 74 114-194 34-109 (266)
381 1vlj_A NADH-dependent butanol 52.1 59 0.002 28.6 8.5 110 103-220 21-153 (407)
382 3qiv_A Short-chain dehydrogena 52.0 87 0.003 24.8 9.4 74 114-193 23-96 (253)
383 3ic5_A Putative saccharopine d 52.0 53 0.0018 22.3 8.7 49 81-132 8-57 (118)
384 3lf2_A Short chain oxidoreduct 51.9 87 0.003 25.2 9.1 76 114-194 22-98 (265)
385 3pk0_A Short-chain dehydrogena 51.9 90 0.0031 25.1 9.2 76 114-194 24-99 (262)
386 3h2s_A Putative NADH-flavin re 51.7 43 0.0015 25.9 6.9 50 80-132 3-52 (224)
387 2fvy_A D-galactose-binding per 51.3 95 0.0032 25.0 15.6 45 173-219 192-238 (309)
388 3imf_A Short chain dehydrogena 51.1 89 0.003 25.0 9.0 74 114-193 20-93 (257)
389 4hy3_A Phosphoglycerate oxidor 51.1 97 0.0033 27.0 9.6 117 77-221 176-294 (365)
390 3k92_A NAD-GDH, NAD-specific g 51.0 36 0.0012 30.5 6.8 51 59-110 202-253 (424)
391 1pg5_A Aspartate carbamoyltran 50.6 16 0.00054 31.2 4.3 58 71-132 144-206 (299)
392 4g2n_A D-isomer specific 2-hyd 50.4 70 0.0024 27.6 8.6 115 77-218 173-289 (345)
393 3rkr_A Short chain oxidoreduct 50.3 96 0.0033 24.8 9.3 74 114-193 43-116 (262)
394 2izz_A Pyrroline-5-carboxylate 50.1 1.1E+02 0.0039 25.6 11.8 119 81-221 25-147 (322)
395 3d3w_A L-xylulose reductase; u 50.1 70 0.0024 25.1 8.1 54 77-133 7-62 (244)
396 3oig_A Enoyl-[acyl-carrier-pro 49.8 79 0.0027 25.3 8.5 85 103-195 8-99 (266)
397 3grk_A Enoyl-(acyl-carrier-pro 49.6 1.1E+02 0.0037 25.2 9.6 87 102-195 31-121 (293)
398 2o8n_A APOA-I binding protein; 49.6 26 0.0009 29.2 5.5 49 79-127 81-136 (265)
399 2bma_A Glutamate dehydrogenase 49.5 60 0.0021 29.4 8.2 50 59-109 233-283 (470)
400 1gdh_A D-glycerate dehydrogena 49.5 75 0.0026 26.9 8.5 107 77-206 146-254 (320)
401 3ly1_A Putative histidinol-pho 49.3 40 0.0014 28.1 6.8 52 81-133 71-122 (354)
402 3ucx_A Short chain dehydrogena 49.3 1E+02 0.0035 24.8 10.6 85 103-193 12-98 (264)
403 3q2o_A Phosphoribosylaminoimid 49.2 26 0.00089 30.4 5.7 35 75-110 12-46 (389)
404 3f9t_A TDC, L-tyrosine decarbo 49.2 66 0.0022 26.9 8.2 53 81-133 89-153 (397)
405 3rd5_A Mypaa.01249.C; ssgcid, 49.1 97 0.0033 25.3 9.1 53 77-132 16-69 (291)
406 2gdz_A NAD+-dependent 15-hydro 49.0 68 0.0023 25.8 8.0 33 77-109 7-39 (267)
407 1cyd_A Carbonyl reductase; sho 49.0 75 0.0026 24.9 8.1 54 77-133 7-62 (244)
408 2g76_A 3-PGDH, D-3-phosphoglyc 48.9 90 0.0031 26.7 9.0 105 77-206 165-271 (335)
409 3oz2_A Digeranylgeranylglycero 48.8 18 0.00061 30.6 4.5 27 81-107 7-33 (397)
410 4hb9_A Similarities with proba 48.5 19 0.00066 30.7 4.7 27 81-107 4-30 (412)
411 3n58_A Adenosylhomocysteinase; 48.4 67 0.0023 29.1 8.2 98 71-196 241-338 (464)
412 3sg0_A Extracellular ligand-bi 48.2 1.2E+02 0.0041 25.3 11.6 149 62-221 78-251 (386)
413 3cq5_A Histidinol-phosphate am 48.1 35 0.0012 28.9 6.3 51 81-133 95-146 (369)
414 1id1_A Putative potassium chan 48.1 62 0.0021 23.6 7.0 30 81-110 6-35 (153)
415 4ggo_A Trans-2-enoyl-COA reduc 47.9 55 0.0019 29.0 7.5 74 77-150 50-138 (401)
416 3lop_A Substrate binding perip 47.8 1.1E+02 0.0037 25.5 9.4 131 81-221 77-233 (364)
417 3gvp_A Adenosylhomocysteinase 47.7 71 0.0024 28.7 8.3 97 72-196 215-311 (435)
418 3aog_A Glutamate dehydrogenase 47.5 91 0.0031 28.0 9.0 51 59-110 216-267 (440)
419 1oaa_A Sepiapterin reductase; 47.4 63 0.0022 25.8 7.5 71 78-148 7-84 (259)
420 3ryc_A Tubulin alpha chain; al 47.4 41 0.0014 30.4 6.7 69 151-219 89-174 (451)
421 3ijr_A Oxidoreductase, short c 47.2 1E+02 0.0035 25.3 8.9 87 103-194 48-136 (291)
422 3l77_A Short-chain alcohol deh 47.0 50 0.0017 25.9 6.7 76 114-194 16-91 (235)
423 8abp_A L-arabinose-binding pro 46.8 1.1E+02 0.0038 24.6 15.4 54 165-220 179-235 (306)
424 3tl3_A Short-chain type dehydr 46.8 54 0.0019 26.2 7.0 64 78-146 10-74 (257)
425 2vz8_A Fatty acid synthase; tr 46.6 1.4E+02 0.0047 33.1 11.7 73 74-146 1881-1959(2512)
426 3nrc_A Enoyl-[acyl-carrier-pro 46.4 1.1E+02 0.0036 24.9 8.8 84 103-194 27-114 (280)
427 4dry_A 3-oxoacyl-[acyl-carrier 46.4 89 0.003 25.5 8.4 76 114-194 47-122 (281)
428 4gud_A Imidazole glycerol phos 46.1 1E+02 0.0035 23.9 8.6 55 79-143 5-59 (211)
429 3q98_A Transcarbamylase; rossm 45.9 44 0.0015 29.7 6.6 44 88-131 209-258 (399)
430 2vdc_G Glutamate synthase [NAD 45.9 71 0.0024 28.4 8.2 54 76-130 263-322 (456)
431 1gtm_A Glutamate dehydrogenase 45.8 72 0.0024 28.4 8.0 51 59-110 192-245 (419)
432 3ryc_B Tubulin beta chain; alp 45.8 37 0.0013 30.6 6.1 69 151-219 87-172 (445)
433 1e7w_A Pteridine reductase; di 45.6 59 0.002 26.7 7.2 53 78-130 10-65 (291)
434 2yfk_A Aspartate/ornithine car 45.6 43 0.0015 30.0 6.4 44 88-131 206-255 (418)
435 2ioy_A Periplasmic sugar-bindi 45.5 1.2E+02 0.0039 24.3 17.1 121 95-219 76-218 (283)
436 3d02_A Putative LACI-type tran 45.4 1.2E+02 0.004 24.4 18.5 147 63-218 52-224 (303)
437 3td9_A Branched chain amino ac 45.3 1.3E+02 0.0045 24.9 12.4 150 61-221 69-241 (366)
438 2qhx_A Pteridine reductase 1; 45.3 58 0.002 27.5 7.2 53 78-130 47-102 (328)
439 3ffh_A Histidinol-phosphate am 45.1 31 0.0011 28.9 5.4 52 81-133 87-138 (363)
440 3egc_A Putative ribose operon 45.0 1.2E+02 0.004 24.3 18.5 37 182-220 185-225 (291)
441 2vhw_A Alanine dehydrogenase; 44.9 44 0.0015 29.1 6.5 48 77-128 168-216 (377)
442 2tmg_A Protein (glutamate dehy 44.6 1.4E+02 0.0048 26.5 9.7 51 59-110 190-242 (415)
443 3gaf_A 7-alpha-hydroxysteroid 44.2 1.2E+02 0.0041 24.2 9.5 75 114-194 26-100 (256)
444 3slk_A Polyketide synthase ext 44.1 17 0.0006 35.2 4.0 39 70-108 339-377 (795)
445 4fgs_A Probable dehydrogenase 43.8 46 0.0016 27.7 6.2 88 98-194 25-114 (273)
446 4h15_A Short chain alcohol deh 43.8 69 0.0024 26.2 7.2 65 77-150 11-76 (261)
447 3snr_A Extracellular ligand-bi 43.6 1.3E+02 0.0046 24.6 11.7 145 62-221 58-227 (362)
448 3h9u_A Adenosylhomocysteinase; 43.6 98 0.0033 27.8 8.5 97 72-196 206-302 (436)
449 3brs_A Periplasmic binding pro 43.5 1.2E+02 0.0042 24.1 13.4 91 125-220 132-227 (289)
450 1bgv_A Glutamate dehydrogenase 43.4 64 0.0022 29.1 7.3 50 59-109 211-261 (449)
451 3asu_A Short-chain dehydrogena 43.3 47 0.0016 26.6 6.0 66 80-149 3-71 (248)
452 3un1_A Probable oxidoreductase 43.2 49 0.0017 26.8 6.2 65 78-149 29-93 (260)
453 3f1l_A Uncharacterized oxidore 43.0 89 0.003 24.9 7.7 86 103-193 13-102 (252)
454 3ruf_A WBGU; rossmann fold, UD 42.9 1.2E+02 0.0039 25.3 8.7 45 78-122 26-71 (351)
455 4amu_A Ornithine carbamoyltran 42.9 61 0.0021 28.3 6.9 59 71-131 175-243 (365)
456 3r6d_A NAD-dependent epimerase 42.7 72 0.0025 24.6 6.9 48 80-130 8-57 (221)
457 3enk_A UDP-glucose 4-epimerase 42.6 1.4E+02 0.0047 24.6 9.1 33 78-110 6-38 (341)
458 2hmt_A YUAA protein; RCK, KTN, 42.6 47 0.0016 23.5 5.4 48 81-131 9-56 (144)
459 3ce9_A Glycerol dehydrogenase; 42.6 91 0.0031 26.6 8.1 109 102-221 11-123 (354)
460 2pi1_A D-lactate dehydrogenase 42.2 1.4E+02 0.0048 25.4 9.2 117 77-221 141-259 (334)
461 3v8b_A Putative dehydrogenase, 42.1 1.4E+02 0.0048 24.3 9.7 86 103-194 29-116 (283)
462 4dgs_A Dehydrogenase; structur 41.9 1.5E+02 0.0052 25.4 9.3 114 77-220 171-286 (340)
463 3vtz_A Glucose 1-dehydrogenase 41.8 99 0.0034 25.0 7.9 66 76-149 13-78 (269)
464 3jtm_A Formate dehydrogenase, 41.6 1.7E+02 0.0058 25.2 11.2 118 77-219 164-283 (351)
465 2cul_A Glucose-inhibited divis 41.4 30 0.001 27.5 4.5 30 81-110 6-35 (232)
466 2aef_A Calcium-gated potassium 41.1 1.3E+02 0.0044 23.6 10.4 47 81-132 12-58 (234)
467 1orr_A CDP-tyvelose-2-epimeras 41.0 1.5E+02 0.0051 24.3 9.8 53 80-132 4-59 (347)
468 1spx_A Short-chain reductase f 40.9 86 0.0029 25.3 7.4 32 78-109 7-38 (278)
469 3rih_A Short chain dehydrogena 40.8 1.1E+02 0.0037 25.3 8.1 75 114-194 55-130 (293)
470 1ek6_A UDP-galactose 4-epimera 40.7 1E+02 0.0034 25.6 8.0 32 78-109 3-34 (348)
471 2bkw_A Alanine-glyoxylate amin 40.6 55 0.0019 27.4 6.3 52 80-132 61-117 (385)
472 2dgk_A GAD-beta, GADB, glutama 40.4 62 0.0021 28.3 6.8 52 81-133 106-169 (452)
473 3h5t_A Transcriptional regulat 40.3 1.6E+02 0.0055 24.6 16.4 36 182-219 267-306 (366)
474 4da9_A Short-chain dehydrogena 40.3 1.5E+02 0.005 24.1 9.6 87 103-194 30-118 (280)
475 3tha_A Tryptophan synthase alp 40.2 30 0.001 28.6 4.4 72 81-156 91-170 (252)
476 4ibo_A Gluconate dehydrogenase 40.1 1.5E+02 0.005 24.0 10.7 75 114-194 40-114 (271)
477 1jx6_A LUXP protein; protein-l 40.1 1.5E+02 0.0053 24.3 15.4 37 182-220 233-270 (342)
478 2dwc_A PH0318, 433AA long hypo 40.1 1.7E+02 0.006 25.3 9.8 30 81-110 22-51 (433)
479 3tfo_A Putative 3-oxoacyl-(acy 40.1 1.5E+02 0.005 24.0 9.3 75 114-194 18-92 (264)
480 3t4x_A Oxidoreductase, short c 40.1 92 0.0031 25.1 7.4 55 77-131 10-67 (267)
481 3r3j_A Glutamate dehydrogenase 40.0 44 0.0015 30.2 5.7 51 58-109 219-270 (456)
482 3r1i_A Short-chain type dehydr 40.0 1.4E+02 0.0049 24.1 8.7 86 103-194 33-120 (276)
483 3uve_A Carveol dehydrogenase ( 40.0 1.5E+02 0.005 24.0 9.4 88 103-194 12-115 (286)
484 2ywl_A Thioredoxin reductase r 39.9 38 0.0013 25.3 4.7 30 81-110 4-33 (180)
485 2gqw_A Ferredoxin reductase; f 39.8 1.2E+02 0.004 26.3 8.5 52 77-129 145-206 (408)
486 2x5d_A Probable aminotransfera 39.7 1.1E+02 0.0037 26.1 8.3 81 81-162 102-184 (412)
487 3cs3_A Sugar-binding transcrip 39.6 1.4E+02 0.0048 23.6 11.6 36 182-219 176-215 (277)
488 3vnd_A TSA, tryptophan synthas 39.5 56 0.0019 27.2 5.9 61 92-156 114-177 (267)
489 4hvk_A Probable cysteine desul 39.4 47 0.0016 27.6 5.7 81 81-163 63-151 (382)
490 2dri_A D-ribose-binding protei 39.4 1.4E+02 0.0048 23.6 14.1 90 125-219 124-217 (271)
491 2nac_A NAD-dependent formate d 39.4 2E+02 0.0067 25.2 11.1 108 76-206 190-299 (393)
492 3nra_A Aspartate aminotransfer 39.3 1.6E+02 0.0055 24.7 9.2 51 81-132 105-155 (407)
493 3tnl_A Shikimate dehydrogenase 39.3 1.8E+02 0.006 24.7 9.5 56 53-111 132-187 (315)
494 3ond_A Adenosylhomocysteinase; 39.3 1.2E+02 0.0041 27.6 8.5 52 72-127 260-311 (488)
495 2j6i_A Formate dehydrogenase; 39.2 1.9E+02 0.0064 24.9 10.2 108 76-206 163-273 (364)
496 3zxn_A RSBS, anti-sigma-factor 39.1 13 0.00044 27.0 1.7 63 83-150 57-121 (123)
497 1yvv_A Amine oxidase, flavin-c 39.1 32 0.0011 28.5 4.5 28 81-108 5-32 (336)
498 2oln_A NIKD protein; flavoprot 39.1 31 0.001 29.6 4.5 29 80-108 6-34 (397)
499 3k7y_A Aspartate aminotransfer 39.0 1.9E+02 0.0065 25.0 9.8 78 51-132 70-151 (405)
500 3jx9_A Putative phosphoheptose 38.9 43 0.0015 25.9 4.8 37 73-109 74-112 (170)
No 1
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=100.00 E-value=7.2e-56 Score=396.75 Aligned_cols=232 Identities=56% Similarity=0.950 Sum_probs=215.6
Q ss_pred HHHHHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHH
Q 025563 15 AIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLA 94 (251)
Q Consensus 15 ~~~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA 94 (251)
.+++.|.+.||+|||+++++|++.+|++||+|+|++|||||||+|++.+++.+|.++|.+.+|..+||++|+||||.|+|
T Consensus 24 ~i~~~i~~lIG~TPLv~~~~Ls~~~G~~IylK~E~lnptGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA 103 (344)
T 3vc3_A 24 NIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMA 103 (344)
T ss_dssp SCBSSGGGGSCCCCEEECCSTTTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHHH
T ss_pred hhhccHhhhcCCCceEECcccchhhCCEEEEEecCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHHH
Confidence 35667999999999999999999999999999999999999999999999999999999888877799999999999999
Q ss_pred HHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHH
Q 025563 95 FIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGP 174 (251)
Q Consensus 95 ~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~ 174 (251)
++|+++|++|+||||++++..|+++++.+||+|+.++...++.++...+.++..+.++.+|++||+||.++.+||.|++.
T Consensus 104 ~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~~~a~~~t~g~ 183 (344)
T 3vc3_A 104 FMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGP 183 (344)
T ss_dssp HHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEECCCTTTCHHHHHHHHHTHHH
T ss_pred HHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCCCcchHHHHHHHHHHhhccCceeccccccchhHHHHHHHHHH
Confidence 99999999999999999999999999999999999987545556666666666666799999999999999889999999
Q ss_pred HHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCCceeecccCCccccccc
Q 025563 175 EIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLNGGQPGRLLFFLFFLFFFCFFF 246 (251)
Q Consensus 175 EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~~~~~~~~~i~g~g~~~~~~~~ 246 (251)
||++|+++.+|+||+|+|+||+++|++.++++.+|++||++|||.+|+++.++.++++.++|+|.++.|.+.
T Consensus 184 EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigVep~~s~~l~~~~~~~~~i~g~g~~~~~~~~ 255 (344)
T 3vc3_A 184 EIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGKPGPHHITGNGVGFKPDIL 255 (344)
T ss_dssp HHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTC
T ss_pred HHHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEEEEcCCCChhhcCCCCCCeeEecccccccCccc
Confidence 999999889999999999999999999999999999999999999999999999999999999999887653
No 2
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=100.00 E-value=1e-54 Score=387.96 Aligned_cols=235 Identities=41% Similarity=0.696 Sum_probs=220.1
Q ss_pred hhhHHHHHHHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChH
Q 025563 10 NHHKRAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNT 89 (251)
Q Consensus 10 ~~~~~~~~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~ 89 (251)
+.++..+++++...+++|||++++++ +.+|.+||+|+|++||+||||+|++.+++.++.++|.+++|.+.||++|+|||
T Consensus 5 ~~~i~~~~~~i~~~ig~TPL~~l~~l-~~~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~ 83 (334)
T 3tbh_A 5 FDKSKNVAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNT 83 (334)
T ss_dssp CCTTTSCCSSGGGGSSCCCEEECCTT-CCSSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHH
T ss_pred hhhHHHHHHHHHHhcCCCCeEECCcc-cCCCCEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCHH
Confidence 67778888999999999999999999 77889999999999999999999999999999999988888764599999999
Q ss_pred HHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHH
Q 025563 90 GIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHY 169 (251)
Q Consensus 90 g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~ 169 (251)
|+|+|++|+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.++++|++||+|+.|+..||
T Consensus 84 g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~np~n~~~g~ 163 (334)
T 3tbh_A 84 GVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHE 163 (334)
T ss_dssp HHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCchHHHHHHHHHHHhCCCEEECCccCChhHHHHHH
Confidence 99999999999999999999999999999999999999999875568899999999988877899999999999888899
Q ss_pred hhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCCceeecccCCcccccc
Q 025563 170 ETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLNGGQPGRLLFFLFFLFFFCFF 245 (251)
Q Consensus 170 ~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~~~~~~~~~i~g~g~~~~~~~ 245 (251)
.+++.||++|+++.+|+||+|+|+||+++|++.++++.+|++||+||||++|+++..+.+.++.++||+.+++|..
T Consensus 164 ~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~gi~~~~~~~~ 239 (334)
T 3tbh_A 164 ETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTESPVLSGGKPGPHKIQGIGPGFVPDV 239 (334)
T ss_dssp HTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETTSCTTTTCCCCCCSCTTSCCSSCCTT
T ss_pred HHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCCchHhhCCCcCCeecCCCCCCcCCHH
Confidence 9999999999977899999999999999999999999999999999999999999888888999999999887754
No 3
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=100.00 E-value=5.1e-54 Score=393.00 Aligned_cols=231 Identities=65% Similarity=1.066 Sum_probs=217.4
Q ss_pred HHHHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHH
Q 025563 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAF 95 (251)
Q Consensus 16 ~~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~ 95 (251)
+++++.+.+++|||++++++++.+|.+||+|+|++||+||||+|++.+++.++.++|.+.+|..+||++|+||||+|+|+
T Consensus 113 ~~~~i~~~ig~TPLv~l~~Ls~~~g~~I~lK~E~lnptGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~AlA~ 192 (430)
T 4aec_A 113 IADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAF 192 (430)
T ss_dssp CBSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHH
T ss_pred hhhhhhccCCCCCeEEChhhhhhcCCeEEEEECCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEECCCHHHHHHHH
Confidence 45788999999999999999998899999999999999999999999999999999998888667999999999999999
Q ss_pred HHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHH
Q 025563 96 IAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPE 175 (251)
Q Consensus 96 ~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 175 (251)
+|+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.++.+|++||+|+.++.+||.+++.|
T Consensus 193 aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~~~~~~~a~~~a~el~~~~~~~~~i~~~~np~~~~aG~~T~a~E 272 (430)
T 4aec_A 193 IAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPE 272 (430)
T ss_dssp HHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEEECCTTTCTHHHHHHHHTHHHH
T ss_pred HHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECCCCChHHHHHHHHHHHHhcCCcEEecCCCCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999865568899999999998877899999999999976799999999
Q ss_pred HhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCCceeecccCCccccccc
Q 025563 176 IWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLNGGQPGRLLFFLFFLFFFCFFF 246 (251)
Q Consensus 176 I~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~~~~~~~~~i~g~g~~~~~~~~ 246 (251)
|++|+.+.+|+||+|+|+||+++|++.++++.+|++||+||||++++++.++.++++.++|||.+++|..+
T Consensus 273 I~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~s~~l~~g~~~~~~i~Gl~~~~~p~~l 343 (430)
T 4aec_A 273 IWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNL 343 (430)
T ss_dssp HHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTC
T ss_pred HHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCCCcHhhCCCccceeehhccCCCCcHHH
Confidence 99999778999999999999999999999999999999999999999999889999999999999887643
No 4
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=100.00 E-value=4.8e-53 Score=375.40 Aligned_cols=229 Identities=66% Similarity=1.077 Sum_probs=213.2
Q ss_pred HHHHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHH
Q 025563 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAF 95 (251)
Q Consensus 16 ~~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~ 95 (251)
+++++...+++|||+++++|++.+|.+||+|+|++||+||||+|++.+++.++.++|.++++..+||++|+||||+|+|+
T Consensus 5 ~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~assGN~g~alA~ 84 (322)
T 1z7w_A 5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAF 84 (322)
T ss_dssp CCSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHH
T ss_pred hhhHHHHhcCCCCeEECccccccCCceEEEEecccCCCCchHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHHH
Confidence 35678899999999999999988889999999999999999999999999999999988877656999999999999999
Q ss_pred HHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHH
Q 025563 96 IAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPE 175 (251)
Q Consensus 96 ~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 175 (251)
+|+++|++|+||||.+++..|+++++.+||+|+.+++..+++++.+.+++++++.++.+|++||+|+.++..||.|++.|
T Consensus 85 aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~n~~~~~~g~~t~~~E 164 (322)
T 1z7w_A 85 TAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPE 164 (322)
T ss_dssp HHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHHH
T ss_pred HHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCeEeCCCCCChhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999875457889999999998877899999999999987799999999
Q ss_pred HhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCCceeecccCCccccc
Q 025563 176 IWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLNGGQPGRLLFFLFFLFFFCF 244 (251)
Q Consensus 176 I~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~~~~~~~~~i~g~g~~~~~~ 244 (251)
|++|+++++|+||+|+|+||+++|++.+|++.+|++||++|||++|+++.++.++++.++||+.+.+|.
T Consensus 165 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~~~~~~~~~~gl~~~~~~~ 233 (322)
T 1z7w_A 165 IWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPS 233 (322)
T ss_dssp HHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCT
T ss_pred HHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCCCccccCCCCCCcccCcCcCCCCCh
Confidence 999997789999999999999999999999999999999999999999988888888899999887664
No 5
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=100.00 E-value=6e-52 Score=366.96 Aligned_cols=229 Identities=48% Similarity=0.772 Sum_probs=211.2
Q ss_pred HHHHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHH
Q 025563 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAF 95 (251)
Q Consensus 16 ~~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~ 95 (251)
+++++...+++|||+++++|++..|.+||+|+|++||+||||+|++.+++..+.++|.+++|.+ ||++|+||||+|+|+
T Consensus 6 ~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g~~-vv~assGN~g~alA~ 84 (313)
T 2q3b_A 6 IAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPDTI-ILEPTSGNTGIALAM 84 (313)
T ss_dssp CCSSGGGGSCCCCEEECSSSCTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTCE-EEEECSSHHHHHHHH
T ss_pred hhhhHHHhcCCCceEECcccccccCcEEEEEehhcCCCCcHHHHHHHHHHHHHHHcCCCCCCCE-EEEeCCCHHHHHHHH
Confidence 3577889999999999999988888999999999999999999999999999999998777665 999999999999999
Q ss_pred HHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHH
Q 025563 96 IAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPE 175 (251)
Q Consensus 96 ~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 175 (251)
+|+++|++|+||||..++..|+++++.+||+|+.++...+++++.+.+++++++.+..+++++|+|+.+++.||.|++.|
T Consensus 85 ~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~~~~~~~~t~~~E 164 (313)
T 2q3b_A 85 VCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEE 164 (313)
T ss_dssp HHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHHHHHHHTHHHH
T ss_pred HHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHHHHhCCCEEeCCCCCChhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999975468899999999998875558899999999998779999999
Q ss_pred HhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCCceeecccCCcccccc
Q 025563 176 IWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLNGGQPGRLLFFLFFLFFFCFF 245 (251)
Q Consensus 176 I~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~~~~~~~~~i~g~g~~~~~~~ 245 (251)
|++|+.+++|+||+|+|+||+++|++.++++.+|++||++|||++++++..+.++++.++|++.+++|..
T Consensus 165 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~~~~g~~~~~g~~~~~~~~~ 234 (313)
T 2q3b_A 165 VWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPHPIQGIGAGFVPPV 234 (313)
T ss_dssp HHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTSCTTTTCCCCCCCCTTSCCSSCCTT
T ss_pred HHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCCCccccCCCCCCcccCCcCCCCCChh
Confidence 9999976799999999999999999999999999999999999999988766777889999998877764
No 6
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=100.00 E-value=5.9e-52 Score=368.88 Aligned_cols=221 Identities=39% Similarity=0.588 Sum_probs=205.0
Q ss_pred HHHHhhcccCCCcceeccccccc-------CCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccCh
Q 025563 16 IKKDATQLIGNTPMVYLNNVVDG-------CVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGN 88 (251)
Q Consensus 16 ~~~~v~~~~~~TPl~~~~~l~~~-------~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN 88 (251)
+++++.+.+++|||+++++|++. .|.+||+|+|++||+||||+|++.+++.++.++|.++++.+ ||++|+||
T Consensus 5 ~~~~i~~~ig~TPL~~~~~l~~~~~~~~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~l~~~~~-vv~aSsGN 83 (325)
T 3dwg_A 5 RYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGAT-ILEPTSGN 83 (325)
T ss_dssp EESSTGGGCSCCCEEECTTTSSBSSCBTTBCCEEEEEEETTSSTTSBTTHHHHHHHHHHHHHTTCCCTTCE-EEEECSSH
T ss_pred cccCHHHhcCCCCcEEccccchhhcccccCCCcEEEEEECCCCCCCChHHHHHHHHHHHHHHcCCCCCCCE-EEEeCCcH
Confidence 45778899999999999999887 78899999999999999999999999999999998887766 99999999
Q ss_pred HHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHH
Q 025563 89 TGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIH 168 (251)
Q Consensus 89 ~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g 168 (251)
||+|+|++|+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.++++|++||+||.++++|
T Consensus 84 ~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~np~~~~~g 163 (325)
T 3dwg_A 84 TGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSH 163 (325)
T ss_dssp HHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECSTTTHHHHHHHHHHHHHHCTTSBCCCTTTCHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEeCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999997667899999999999888669999999999999779
Q ss_pred HhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCCceeecccCCcccccc
Q 025563 169 YETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLNGGQPGRLLFFLFFLFFFCFF 245 (251)
Q Consensus 169 ~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~~~~~~~~~i~g~g~~~~~~~ 245 (251)
|.+++.||++|++. +|+||+|+|+||+++|++.++++.+|++||+||||++++++ +.+++|+.+++|..
T Consensus 164 ~~t~~~Ei~~q~~~-~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~-------~~~~~i~~~~~~~~ 232 (325)
T 3dwg_A 164 YCGTGPELLADLPE-ITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYGEGV-------YALRNMDEGFVPEL 232 (325)
T ss_dssp HHTHHHHHHHHCTT-CCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEECCGGG-------GCCSSGGGCCCCTT
T ss_pred HHHHHHHHHHhcCC-CCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCCCcch-------hccCcccCCcCccc
Confidence 99999999999964 99999999999999999999999999999999999999876 45778888887754
No 7
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=100.00 E-value=1.1e-51 Score=363.87 Aligned_cols=225 Identities=47% Similarity=0.700 Sum_probs=206.8
Q ss_pred hhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCC-eEEEEeccChHHHHHHHHHH
Q 025563 20 ATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGK-SVLIETTGGNTGIGLAFIAA 98 (251)
Q Consensus 20 v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~-~~vv~~ssGN~g~alA~~a~ 98 (251)
+...+++|||+++++|++.+|.+||+|+|++||+||||+|++.+++.++.++|.++++. .+||++|+||||+|+|++|+
T Consensus 3 i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~g~~~~vv~assGN~g~a~A~~a~ 82 (304)
T 1ve1_A 3 VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIAA 82 (304)
T ss_dssp GGGGCCCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTSCCEEEESCCSHHHHHHHHHHH
T ss_pred hHHhcCCCCcEECcccccccCCEEEEEecccCCCCcHHHHHHHHHHHHHHHcCCCCCCCccEEEEeCCcHHHHHHHHHHH
Confidence 56789999999999999888999999999999999999999999999999999877665 14999999999999999999
Q ss_pred HCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhh
Q 025563 99 LRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWK 178 (251)
Q Consensus 99 ~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~ 178 (251)
++|++|+||||.+++..|+++++.+||+|+.++...+++++.+.+++++++ ++++|++||+|+.+++.+|.+++.||++
T Consensus 83 ~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~~~~~~~~~~a~~l~~~-~~~~~~~~~~n~~~~~g~~~t~~~Ei~~ 161 (304)
T 1ve1_A 83 SRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEE-LGAFMPDQFKNPANVRAHYETTGPELYE 161 (304)
T ss_dssp HHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH-HTCBCCCTTTCHHHHHHHHHTHHHHHHH
T ss_pred HcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHhc-CCCEeCCCCCChhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999864588999999999887 4889999999999997458999999999
Q ss_pred hhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCCceeecccCCcccccc
Q 025563 179 DSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLNGGQPGRLLFFLFFLFFFCFF 245 (251)
Q Consensus 179 q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~~~~~~~~~i~g~g~~~~~~~ 245 (251)
|+...+|+||+|+|+||+++|++.++++.+|++||++|||++++.+.++.++++.++||+.+.+|..
T Consensus 162 q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~g~~~~~~~~gl~~~~~~~~ 228 (304)
T 1ve1_A 162 ALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGGKMGQHGFQGMGPGFIPEN 228 (304)
T ss_dssp HTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGGCTTTTCCCCCCSCTTSCCSSCCTT
T ss_pred HcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCCccccCCCCCCcccCCCCCCCCChh
Confidence 9976799999999999999999999999999999999999999988877788889999999877753
No 8
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=100.00 E-value=2.5e-51 Score=361.52 Aligned_cols=219 Identities=42% Similarity=0.681 Sum_probs=202.1
Q ss_pred HHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHHHH
Q 025563 18 KDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAFIA 97 (251)
Q Consensus 18 ~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a 97 (251)
+++...+++|||+++++|++.+|.+||+|+|++||+||||+|++.+++.++.++|.++++.+ ||++|+||||+|+|++|
T Consensus 2 ~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~g~~-vv~~ssGN~g~a~A~~a 80 (303)
T 2v03_A 2 STLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGDV-LIEATSGNTGIALAMIA 80 (303)
T ss_dssp CSGGGGSSCCCEEECSSSSCSSSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTCE-EEEECSSHHHHHHHHHH
T ss_pred cchHhhcCCCCcEECcccccccCCEEEEEeccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCE-EEEECCcHHHHHHHHHH
Confidence 46788899999999999998889999999999999999999999999999999998777655 99999999999999999
Q ss_pred HHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHh
Q 025563 98 ALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIW 177 (251)
Q Consensus 98 ~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~ 177 (251)
+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.+++ |++||+|+.++++||.+++.||+
T Consensus 81 ~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~n~~~~~~g~~t~~~Ei~ 159 (303)
T 2v03_A 81 ALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGK-LLDQFNNPDNPYAHYTTTGPEIW 159 (303)
T ss_dssp HHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHTTSCE-ECCTTTCTHHHHHHHHTHHHHHH
T ss_pred HHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCc-ccCCcCChhhHHHhcCCcHHHHH
Confidence 99999999999999999999999999999999997657899999999998885577 99999999998779999999999
Q ss_pred hhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCCceeecccCCcccccc
Q 025563 178 KDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLNGGQPGRLLFFLFFLFFFCFF 245 (251)
Q Consensus 178 ~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~~~~~~~~~i~g~g~~~~~~~ 245 (251)
+|+...+|+||+|+|+||+++|++.++++.+|++||++|||++++++.+ ++|++.+.+|..
T Consensus 160 ~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~-------~~gl~~~~~~~~ 220 (303)
T 2v03_A 160 QQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPG-------IRRWPTEYLPGI 220 (303)
T ss_dssp HHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTTCCCTT-------CCCCCGGGCCTT
T ss_pred HHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCCccccc-------CCcCCCCCCCcc
Confidence 9997679999999999999999999999999999999999999988763 788888877754
No 9
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=100.00 E-value=5.5e-52 Score=366.42 Aligned_cols=227 Identities=49% Similarity=0.767 Sum_probs=177.0
Q ss_pred HHHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHHH
Q 025563 17 KKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAFI 96 (251)
Q Consensus 17 ~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~ 96 (251)
++++...+++|||+++++|++.+|.+||+|+|++||+||||+|++.+++.++.++|.+++|.+ ||++|+||||+|+|++
T Consensus 5 ~~~i~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g~~-vv~assGN~g~a~A~~ 83 (308)
T 2egu_A 5 VNSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPGDT-IVEPTSGNTGIGLAMV 83 (308)
T ss_dssp CSCGGGGSSCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTCE-EEEECCHHHHHHHHHH
T ss_pred HHHHHHhcCCCCeEECCcccccCCCEEEEEecccCCCCChHHHHHHHHHHHHHHcCCCCCCCE-EEEeCCCHHHHHHHHH
Confidence 567889999999999999998889999999999999999999999999999999998777655 9999999999999999
Q ss_pred HHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHH
Q 025563 97 AALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEI 176 (251)
Q Consensus 97 a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI 176 (251)
|+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++. +++++++|+|+.++.+||.+++.||
T Consensus 84 a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~~~g~~t~~~Ei 162 (308)
T 2egu_A 84 AAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQGMRGAIAKAEELVREH-GYFMPQQFKNEANPEIHRLTTGKEI 162 (308)
T ss_dssp HHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCC--------------CHHHHH
T ss_pred HHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHHC-cCCcCCcCCChhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987545789999999998887 4588899999998867999999999
Q ss_pred hhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCCceeecccCCcccccc
Q 025563 177 WKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLNGGQPGRLLFFLFFLFFFCFF 245 (251)
Q Consensus 177 ~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~~~~~~~~~i~g~g~~~~~~~ 245 (251)
++|+.+.+|+||+|+|+||+++|++.++++.+|++||++|||++++++..+.++++.++|++.+++|..
T Consensus 163 ~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 231 (308)
T 2egu_A 163 VEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADSPVLSGGKPGPHKIQGIGAGFVPDI 231 (308)
T ss_dssp HHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-----------------------CC
T ss_pred HHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCCccccCCCCCCcccCccCCCCCCHh
Confidence 999976799999999999999999999999999999999999999888877777889999998877653
No 10
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=100.00 E-value=8.7e-52 Score=366.37 Aligned_cols=226 Identities=43% Similarity=0.697 Sum_probs=205.0
Q ss_pred HHHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHHH
Q 025563 17 KKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAFI 96 (251)
Q Consensus 17 ~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~ 96 (251)
++++...+++|||+++++| + .|.+||+|+|++||+||||+|++.+++.++.++|.++++.+ ||++|+||||+|+|++
T Consensus 4 ~~~i~~~~~~TPL~~l~~l-~-~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~~~~-vv~~ssGN~g~a~A~~ 80 (316)
T 1y7l_A 4 YADNSYSIGNTPLVRLKHF-G-HNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKGKE-IVDATSGNTGIALAYV 80 (316)
T ss_dssp CSSGGGGCCCCCEEECSSS-S-STTCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSCTTCE-EEESCCSHHHHHHHHH
T ss_pred hhhhHHhcCCCCcEECccC-C-CCCEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCCCE-EEEeCCcHHHHHHHHH
Confidence 5678899999999999999 6 88899999999999999999999999999999998776655 9999999999999999
Q ss_pred HHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCe-EecCCCCCCchHHHHHhhHHHH
Q 025563 97 AALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNG-FMFRQFENPANPKIHYETTGPE 175 (251)
Q Consensus 97 a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~n~~~~~~g~~t~~~E 175 (251)
|+++|++|+||||++++..|+++++.+||+|+.+++..+++++.+.+++++++.++. +|++||+|+.++++||.+++.|
T Consensus 81 a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 160 (316)
T 1y7l_A 81 AAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPE 160 (316)
T ss_dssp HHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHHHH
T ss_pred HHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEECCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987545889999999998887666 8899999999988789999999
Q ss_pred HhhhhCCCCCEEEEecCchhHHHHHHHHHHhhC-CCcEEEEEeCCCCccccCC------CCCceeecccCCcccccc
Q 025563 176 IWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKN-PNIKVYGVEPTESAMLNGG------QPGRLLFFLFFLFFFCFF 245 (251)
Q Consensus 176 I~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~-~~~~vigVep~~s~~~~~~------~~~~~~i~g~g~~~~~~~ 245 (251)
|++|+...+|+||+|+|+||+++|++.++++.+ |++||++|||++++++... ...++.++||+.+++|..
T Consensus 161 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~~~~~g~~~~~~~~~~~gi~~~~~~~~ 237 (316)
T 1y7l_A 161 IWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVKPGPHKIQGIGAGFIPKN 237 (316)
T ss_dssp HHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTSCHHHHHHHTCCCCCCCCSCTTSCCSSCCTT
T ss_pred HHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCCccccccccCCccCCCCcccCcCCCCCCCch
Confidence 999997669999999999999999999999998 9999999999999876531 145778999999877753
No 11
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=100.00 E-value=1.7e-51 Score=368.41 Aligned_cols=228 Identities=39% Similarity=0.622 Sum_probs=210.1
Q ss_pred HHHHhhcccCCCcceecccccc----cCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHH
Q 025563 16 IKKDATQLIGNTPMVYLNNVVD----GCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGI 91 (251)
Q Consensus 16 ~~~~v~~~~~~TPl~~~~~l~~----~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~ 91 (251)
+++++...+++|||+++++|++ ..|.+||+|+|++||+||||+|++.+++..+.++|.+++|.+ ||++|+||||+
T Consensus 13 ~~~~i~~~~g~TPL~~~~~l~~~~~~~~g~~v~~K~E~~~ptGSfKdR~a~~~l~~a~~~g~~~~g~~-vv~aSsGN~g~ 91 (343)
T 2pqm_A 13 IYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPGME-IIESTSGNTGI 91 (343)
T ss_dssp EESSGGGGSSCCCEEECCGGGCSTTSCTTCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTSSCTTCE-EEEECSSHHHH
T ss_pred HHHHHHhhcCCCCeEECCccccccccccCcEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCCCE-EEEECCcHHHH
Confidence 4678899999999999999988 778999999999999999999999999999999998777655 99999999999
Q ss_pred HHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCe-EecCCCCCCchHHHHHh
Q 025563 92 GLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNG-FMFRQFENPANPKIHYE 170 (251)
Q Consensus 92 alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~n~~~~~~g~~ 170 (251)
|+|++|+++|++|+||||++++..|+++++.+||+|+.+++..+++++.+.+++++++.++. ++++||+|+.++.+||.
T Consensus 92 alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~n~~n~~~g~~ 171 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHY 171 (343)
T ss_dssp HHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTTEEECCTTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCcEEECCCCCChhHHHHHHH
Confidence 99999999999999999999999999999999999999987545889999999998887555 77899999999877999
Q ss_pred hHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCCCceeecccCCcccccc
Q 025563 171 TTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLNGGQPGRLLFFLFFLFFFCFF 245 (251)
Q Consensus 171 t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~~~~~~~~~i~g~g~~~~~~~ 245 (251)
+++ ||++|+.+.+|+||+|+|+||+++|++.++++.+|++||+||||++++.+.++..+++.++||+.+++|..
T Consensus 172 t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 245 (343)
T 2pqm_A 172 TAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAKGPHGIQGIGAGFIPDI 245 (343)
T ss_dssp HHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCTTTTCCCCCCCCTTCCCSSCCTT
T ss_pred HHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCCcccccCCCCCeecCccCCCCCCHH
Confidence 999 99999976799999999999999999999999999999999999999988877788889999998877643
No 12
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=100.00 E-value=4.2e-51 Score=366.21 Aligned_cols=215 Identities=23% Similarity=0.284 Sum_probs=196.4
Q ss_pred cccccchhhHHHHHHHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEE
Q 025563 4 EASMEDNHHKRAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIE 83 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~ 83 (251)
+..|.++++|..+++++...+++|||+++++|++.+|.+||+|+|++||+||||+|++.+++.++.+.|....... ||+
T Consensus 3 ~~~~~~~~~i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~~~~-vv~ 81 (346)
T 3l6b_A 3 AQYDISFADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERKPKA-VVT 81 (346)
T ss_dssp CCCSSCHHHHHHHHHHHGGGSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHTTC-----CCCSC-EEE
T ss_pred cccCCCHHHHHHHHHHHhcccCCCCeEEchhhHHHhCCeEEEEeCCCCCCCCcHHHHHHHHHHHHHHhccccCCCE-EEE
Confidence 4567789999999999999999999999999998889999999999999999999999999999988764433344 999
Q ss_pred eccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCc
Q 025563 84 TTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPA 163 (251)
Q Consensus 84 ~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~ 163 (251)
+|+||||+|+|++|+++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++. +.+|+++++|+.
T Consensus 82 ~SsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~l~~~~-~~~~i~~~~np~ 158 (346)
T 3l6b_A 82 HSSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEP--SDESRENVAKRVTEET-EGIMVHPNQEPA 158 (346)
T ss_dssp ECSSHHHHHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECS--SHHHHHHHHHHHHHHH-TCEECCSSSCHH
T ss_pred eCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEECCCCChH
Confidence 9999999999999999999999999999999999999999999999987 5889999999998887 789999999999
Q ss_pred hHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCccc
Q 025563 164 NPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAML 224 (251)
Q Consensus 164 ~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~ 224 (251)
+++ ||.|++.||++|+ +.+|+||+|+|+||+++|++.++++.+|++||+||||++++++
T Consensus 159 ~~~-g~~t~~~Ei~~q~-~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~ 217 (346)
T 3l6b_A 159 VIA-GQGTIALEVLNQV-PLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNADDC 217 (346)
T ss_dssp HHH-HHHHHHHHHHHHS-TTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHH
T ss_pred HHH-HHHHHHHHHHHhC-CCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCCHHH
Confidence 884 9999999999999 5799999999999999999999999999999999999999764
No 13
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=100.00 E-value=3.8e-50 Score=354.01 Aligned_cols=219 Identities=46% Similarity=0.657 Sum_probs=201.0
Q ss_pred HhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHHHHH
Q 025563 19 DATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAFIAA 98 (251)
Q Consensus 19 ~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~ 98 (251)
-+...+++|||+++++++ .+||+|+|++||+||||+|++.+++.++.++|.++++ ||++|+||||+|+|++|+
T Consensus 13 ~~~~~~~~TPL~~l~~l~----~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~~---vv~aSsGN~g~a~A~aa~ 85 (303)
T 1o58_A 13 MMERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG---IVEPTSGNMGIAIAMIGA 85 (303)
T ss_dssp HHHHHSCCCCEEECTTTC----TTEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCTTC---EEEECSSHHHHHHHHHHH
T ss_pred hhhhccCCCCeEECccCC----ceEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCCCC---EEEECchHHHHHHHHHHH
Confidence 366789999999999876 5899999999999999999999999999998875544 999999999999999999
Q ss_pred HCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhh
Q 025563 99 LRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWK 178 (251)
Q Consensus 99 ~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~ 178 (251)
++|++|+||||++++..|+++++.+||+|+.+++..+|+++.+.+++++++. +++|++||+|+.++++||.+++.||++
T Consensus 86 ~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~~g~~t~~~Ei~~ 164 (303)
T 1o58_A 86 KRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEILK 164 (303)
T ss_dssp HHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCCCTTTCHHHHHHHHHTHHHHHHH
T ss_pred HcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhc-CeEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987545889999999998887 788899999999987799999999999
Q ss_pred hhCCCCCEEEEecCchhHHHHHHHHHHhhCCC-cEEEEEeCCCCccccCCCCCceeecccCCcccccc
Q 025563 179 DSGGDVDILVAGIGTGGTVTGSGRFLKEKNPN-IKVYGVEPTESAMLNGGQPGRLLFFLFFLFFFCFF 245 (251)
Q Consensus 179 q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~-~~vigVep~~s~~~~~~~~~~~~i~g~g~~~~~~~ 245 (251)
|+.+.+|+||+|+|+||+++|++.++++.+|+ +||++|||++++++..+.++++.++||+.+.+|..
T Consensus 165 q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~~~~~~g~~~~~~~~gi~~~~~~~~ 232 (303)
T 1o58_A 165 QMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPGKHAIQGIGAGFVPKI 232 (303)
T ss_dssp HTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTSCTTTTCCCCCCCCTTSCCSSCCTT
T ss_pred HcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCCccccCCCCCCeecCcCCCCCcCHH
Confidence 99766999999999999999999999999999 99999999999999888888889999998877643
No 14
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=100.00 E-value=3.6e-49 Score=362.31 Aligned_cols=229 Identities=41% Similarity=0.608 Sum_probs=202.4
Q ss_pred HHHHhhcccCCCcceecccccccCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHH
Q 025563 16 IKKDATQLIGNTPMVYLNNVVDGCV--ARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGL 93 (251)
Q Consensus 16 ~~~~v~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~al 93 (251)
+++++...+++|||+++++|++.+| ++||+|+|++||+||||+|++.+++.++.++|.++++.+ ||++|+||||+|+
T Consensus 98 ~~~~i~~~ig~TPLv~l~~Ls~~~G~~~~v~lK~E~~nptGSfKdR~a~~~i~~a~~~G~l~~g~t-VV~aSsGN~G~Al 176 (435)
T 1jbq_A 98 ILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDT-IIEPTSGNTGIGL 176 (435)
T ss_dssp EESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSCTTCE-EEEECSSHHHHHH
T ss_pred HHHHHHhhCCCCCeEECcchhhHhCCCceEEEEECCCCCcCCHHHHHHHHHHHHHHHcCCCCCCCE-EEEeCCCHHHHHH
Confidence 4567888999999999999988877 699999999999999999999999999999998887766 9999999999999
Q ss_pred HHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHH---HHHHHHHHhhcCCCeEecCCCCCCchHHHHHh
Q 025563 94 AFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEG---ILRKGEEILSNTPNGFMFRQFENPANPKIHYE 170 (251)
Q Consensus 94 A~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~ 170 (251)
|++|+++|++|+||||+.++..|+++++.+||+|+.++...++++ +.+.+++++++.++.||++||+|+.|+.+||.
T Consensus 177 A~aaa~~Gi~~~IvmP~~~s~~k~~~l~~~GAeVv~v~~~~~~d~~~~~~~~a~~la~~~~~~~~i~q~~n~~n~~ag~~ 256 (435)
T 1jbq_A 177 ALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYD 256 (435)
T ss_dssp HHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHHH
T ss_pred HHHHHHcCCeEEEEeCCCCCHHHHHHHHhCCCEEEEecCCCCcchHHHHHHHHHHHHHhcCCeEEeCccCCcccHHHHHH
Confidence 999999999999999999999999999999999999986544554 45678888888767889999999998878999
Q ss_pred hHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCcccc-----CCCCCceeecccCCcccccc
Q 025563 171 TTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLN-----GGQPGRLLFFLFFLFFFCFF 245 (251)
Q Consensus 171 t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~-----~~~~~~~~i~g~g~~~~~~~ 245 (251)
+++.||++|++..+|+||+|+|+||+++|++.+|++..|++||+||||++++.+. .+...++.++|||.+++|.+
T Consensus 257 t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs~~~~~~~l~~~~~~~~~~~gig~~~~~~~ 336 (435)
T 1jbq_A 257 TTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPTV 336 (435)
T ss_dssp THHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTCSCSSSGGGGCCSCCCCSCCSCCCSSCCTT
T ss_pred HHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCchhhchhhhhcCCCcceeecccccCccchh
Confidence 9999999999767999999999999999999999999999999999999996542 23455678999999888765
No 15
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=100.00 E-value=1.9e-49 Score=373.47 Aligned_cols=236 Identities=37% Similarity=0.583 Sum_probs=212.3
Q ss_pred hhhHHHHHHHhhcccCCCcceecccccccCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccC
Q 025563 10 NHHKRAIKKDATQLIGNTPMVYLNNVVDGCV--ARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGG 87 (251)
Q Consensus 10 ~~~~~~~~~~v~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssG 87 (251)
++.+..+++++...+++|||+++++|++.+| ++||+|+|++||+||||+|++.+++.++.++|.+++|.+ ||++|+|
T Consensus 44 ~~~~~~~~~~i~~~ig~TPl~~l~~l~~~~g~~~~i~~K~E~~~ptGS~K~R~a~~~i~~a~~~g~~~~g~~-vv~~ssG 122 (527)
T 3pc3_A 44 IAHRQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGYT-IIEPTSG 122 (527)
T ss_dssp CCCCCSSCSSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHHTCCCTTCE-EEEECSS
T ss_pred ccchhhHHhhHHhhcCCCCcEEcchhhhhcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHHHcCCCCCCCE-EEEeCCC
Confidence 3345567788999999999999999988877 699999999999999999999999999999999888776 9999999
Q ss_pred hHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChH---HHHHHHHHHhhcCCCeEecCCCCCCch
Q 025563 88 NTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFE---GILRKGEEILSNTPNGFMFRQFENPAN 164 (251)
Q Consensus 88 N~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~n~~~ 164 (251)
|||+|+|++|+++|++|+||||+.++..|+++++.+||+|+.++...+|+ .+.+.+++++++.++.+|++||+|+.|
T Consensus 123 N~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~n 202 (527)
T 3pc3_A 123 NTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGN 202 (527)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTSCTTSTTSHHHHHHHHHHHSSSEECCCTTTCTHH
T ss_pred HHHHHHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCCCCCcccHHHHHHHHHHHHHhCCCcEecCCCCCcch
Confidence 99999999999999999999999999999999999999999998754454 367788888888777889999999988
Q ss_pred HHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCcccc-----CCCCCceeecccCC
Q 025563 165 PKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLN-----GGQPGRLLFFLFFL 239 (251)
Q Consensus 165 ~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~-----~~~~~~~~i~g~g~ 239 (251)
+.+||.+++.||++|+.+.+|+||+|+|+||+++|++.++++..|++||+||||++|+.+. .+.++++.++|||.
T Consensus 203 ~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~~~~~~~~~~~~~~~~~~~~gi~~ 282 (527)
T 3pc3_A 203 PLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILARPAELNKTDVQFYEVEGIGY 282 (527)
T ss_dssp HHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTCCCSSSGGGGCCSCCCCSCCSCCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCcccccchhhcCCCCCceeccccCC
Confidence 8889999999999999778999999999999999999999999999999999999997542 24556788999999
Q ss_pred ccccccc
Q 025563 240 FFFCFFF 246 (251)
Q Consensus 240 ~~~~~~~ 246 (251)
+++|..+
T Consensus 283 ~~~p~~~ 289 (527)
T 3pc3_A 283 DFPPTVF 289 (527)
T ss_dssp SSCCTTC
T ss_pred CCCCccc
Confidence 9988653
No 16
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=100.00 E-value=5.3e-50 Score=358.62 Aligned_cols=229 Identities=25% Similarity=0.254 Sum_probs=205.5
Q ss_pred ccccccchhhHHHHHHHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEE
Q 025563 3 LEASMEDNHHKRAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLI 82 (251)
Q Consensus 3 ~~~~~~~~~~~~~~~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv 82 (251)
+|..|.+++++..+++++...+++|||+++++|++.+|++||+|+|++||+||||+|++.+++.++.+++. .. +||
T Consensus 17 ~~~~~~~~~~i~~a~~~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdR~a~~~i~~a~~~~~---~~-~vv 92 (342)
T 2gn0_A 17 TYDLPVAIEDILEAKKRLAGKIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTEAEK---RK-GVV 92 (342)
T ss_dssp HHHSSSCHHHHHHHHHHHTTTSCCCCCCBCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHHSCHHHH---HT-CEE
T ss_pred CchhcCCHHHHHHHHHHHhhhcCCCCceEchhhHHHhCCEEEEEEccCCCcCChHHHHHHHHHHHHHHhcC---CC-EEE
Confidence 45667789999999999999999999999999988889999999999999999999999999998753221 12 399
Q ss_pred EeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCC
Q 025563 83 ETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENP 162 (251)
Q Consensus 83 ~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~ 162 (251)
++|+||||+|+|++|+++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++. +.+|++||+|+
T Consensus 93 ~~ssGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~~~~~a~~l~~~~-~~~~~~~~~n~ 169 (342)
T 2gn0_A 93 ACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGD--NFNDTIAKVSEIVETE-GRIFIPPYDDP 169 (342)
T ss_dssp EECSSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHHSCEEEECCS--SHHHHHHHHHHHHHHH-CCEECCSSSSH
T ss_pred EECCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEeCCCCCH
Confidence 99999999999999999999999999999999999999999999999987 5899999999998875 78999999999
Q ss_pred chHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCcccc----CCCC-----Ccee
Q 025563 163 ANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLN----GGQP-----GRLL 233 (251)
Q Consensus 163 ~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~----~~~~-----~~~~ 233 (251)
.+++ ||.+++.||++|+. ++|+||+|+|+||+++|++.++++.+|++||++|||++++++. .+.+ .++.
T Consensus 170 ~~~~-g~~t~~~Ei~~q~~-~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~s~~~g~~~~~~~~~t~ 247 (342)
T 2gn0_A 170 KVIA-GQGTIGLEIMEDLY-DVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAENVHGMAASYYTGEITTHRTTGTL 247 (342)
T ss_dssp HHHH-HHHHHHHHHHHHCT-TCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTBCHHHHHHHHTSCCCCCSSCCS
T ss_pred HHHH-HHHHHHHHHHHHcC-CCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeCCChhHHHHHHcCCccccCCCCcc
Confidence 9985 99999999999995 7999999999999999999999999999999999999998764 2322 3567
Q ss_pred ecccCCc
Q 025563 234 FFLFFLF 240 (251)
Q Consensus 234 i~g~g~~ 240 (251)
++||+.+
T Consensus 248 a~gl~~~ 254 (342)
T 2gn0_A 248 ADGCDVS 254 (342)
T ss_dssp CGGGCCS
T ss_pred ccccCCC
Confidence 7888865
No 17
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=100.00 E-value=6.7e-50 Score=355.33 Aligned_cols=232 Identities=21% Similarity=0.251 Sum_probs=201.1
Q ss_pred CCccccccchhhHHHHHHHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeE
Q 025563 1 MVLEASMEDNHHKRAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSV 80 (251)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~ 80 (251)
|+.+..|.+++++..+++++...+++|||+++++|++..|.+||+|+|++||+||||+|++.+++..+.+.. +..+
T Consensus 1 ~~~~~~~~~~~~i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGS~KdRga~~~i~~~~~~~----~~~~ 76 (323)
T 1v71_A 1 MSDNLVLPTYDDVASASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQ----RKAG 76 (323)
T ss_dssp -----CCCCHHHHHHHHHHHTTTSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHTTCCHHH----HHHC
T ss_pred CCCCcCCCCHHHHHHHHHHHhccCCCCCceEhHhhHHHhCCeEEEEecCCCCcCCHHHHHHHHHHHHHHHhc----CCCe
Confidence 455566778999999999999999999999999998888899999999999999999999999997654321 1223
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFE 160 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 160 (251)
||++|+||||+|+|++|+++|++|++|||++++..|+++++.+||+|+.+++. ++++.+.+++++++. +++|++||+
T Consensus 77 vv~~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~l~~~~-~~~~i~~~~ 153 (323)
T 1v71_A 77 VLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY--KDDREKMAKEISERE-GLTIIPPYD 153 (323)
T ss_dssp EEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECTT--TTCHHHHHHHHHHHH-TCBCCCSSS
T ss_pred EEEeCCCcHHHHHHHHHHHcCCCEEEECCCCCcHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEecCCCC
Confidence 99999999999999999999999999999999999999999999999999874 567888888888876 678899999
Q ss_pred CCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCccccC----CCC-----Cc
Q 025563 161 NPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLNG----GQP-----GR 231 (251)
Q Consensus 161 n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~~----~~~-----~~ 231 (251)
|+.+++ ||.+++.||++|+. .+|+||+|+|+||+++|++.++++.+|++||+||||++++++.. +.. .+
T Consensus 154 n~~~~~-g~~t~~~Ei~~q~~-~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~g~~~~~~~~~ 231 (323)
T 1v71_A 154 HPHVLA-GQGTAAKELFEEVG-PLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEAGNDGQQSFRKGSIVHIDTPK 231 (323)
T ss_dssp SHHHHH-HHTHHHHHHHHHHC-CCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCHHHHHHHHTSCCCCCCCC
T ss_pred Ccchhh-hHhHHHHHHHHhcC-CCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCCCchHHHHHHcCCceecCCCC
Confidence 999985 99999999999995 79999999999999999999999999999999999999986641 222 24
Q ss_pred eeecccCCcc
Q 025563 232 LLFFLFFLFF 241 (251)
Q Consensus 232 ~~i~g~g~~~ 241 (251)
+..+||+.+.
T Consensus 232 t~a~gl~~~~ 241 (323)
T 1v71_A 232 TIADGAQTQH 241 (323)
T ss_dssp CSCTTSCCSS
T ss_pred cccccccCCC
Confidence 6677887764
No 18
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=100.00 E-value=2.6e-49 Score=349.69 Aligned_cols=208 Identities=25% Similarity=0.276 Sum_probs=189.7
Q ss_pred ccchhhHHHHHHHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEecc
Q 025563 7 MEDNHHKRAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTG 86 (251)
Q Consensus 7 ~~~~~~~~~~~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ss 86 (251)
|.+++++..+++++...+++|||+++++|++.+|.+||+|+|++|||||||||++.+++..+. + +. +||++|+
T Consensus 1 ~~~~~~i~~a~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~i~~l~--~----~~-~vv~~ss 73 (311)
T 1ve5_A 1 MPSLQDLYAAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE--N----PK-GLLAVSS 73 (311)
T ss_dssp -CCHHHHHHHHHHHGGGSCCCCEEECHHHHHHTTSEEEEEEGGGSGGGBTHHHHHHHHHHHSS--S----CC-CEEEECS
T ss_pred CCCHHHHHHHHHHHhccCCCCCceechhhHHhhCCeEEEEecCCCCcCCcHHHHHHHHHHHhc--C----CC-eEEEECC
Confidence 356889999999999999999999999998888999999999999999999999999998875 2 13 3999999
Q ss_pred ChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHH
Q 025563 87 GNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPK 166 (251)
Q Consensus 87 GN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~ 166 (251)
||||+|+|++|+++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++. +++|++||+|+.+++
T Consensus 74 GN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~ 150 (311)
T 1ve5_A 74 GNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGV--TAKNREEVARALQEET-GYALIHPFDDPLVIA 150 (311)
T ss_dssp SHHHHHHHHHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEECTTC--CTTTHHHHHHHHHHHH-CCEECCSSSSHHHHH
T ss_pred CcHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CcEecCCCCCcchhh
Confidence 9999999999999999999999999999999999999999999987 4788899999988875 789999999999995
Q ss_pred HHHhhHHHHHhhhhC---CCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCcccc
Q 025563 167 IHYETTGPEIWKDSG---GDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLN 225 (251)
Q Consensus 167 ~g~~t~~~EI~~q~~---~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~ 225 (251)
||.+++.||++|++ +.+|+||+|+|+||+++|++.++++.+|++||++|||++++++.
T Consensus 151 -g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~~~~~~ 211 (311)
T 1ve5_A 151 -GQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEAADDAK 211 (311)
T ss_dssp -HHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHHH
T ss_pred -hccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCCChHHH
Confidence 99999999999995 67999999999999999999999999999999999999998663
No 19
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=100.00 E-value=1.4e-48 Score=352.08 Aligned_cols=218 Identities=17% Similarity=0.168 Sum_probs=194.0
Q ss_pred HHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHHHH
Q 025563 18 KDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAFIA 97 (251)
Q Consensus 18 ~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a 97 (251)
.+....+++|||+++++|++.+|++||+|+|++||+||||+|++.+++.++.++|. .+||++|+||||+|+|++|
T Consensus 38 ~~~~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~aa 112 (364)
T 4h27_A 38 MSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSSGNAGMAAAYAA 112 (364)
T ss_dssp ---CCSSCCCCEEEEHHHHHHHTSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHHHH
T ss_pred hhcCCCCCcCCeEEChhhHHHhCCEEEEEeCCCCCCCCHHHHHHHHHHHHHHhcCC-----CEEEEeCCChHHHHHHHHH
Confidence 35667889999999999998889999999999999999999999999999988774 3499999999999999999
Q ss_pred HHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHh
Q 025563 98 ALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIW 177 (251)
Q Consensus 98 ~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~ 177 (251)
+++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++.++++|++||+|+.+++ ||.+++.||+
T Consensus 113 ~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~--~~~~a~~~a~~l~~~~~~~~~~~~~~np~~~~-G~~t~~~Ei~ 189 (364)
T 4h27_A 113 RQLGVPATIVVPGTTPALTIERLKNEGATVKVVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLIWE-GHASIVKELK 189 (364)
T ss_dssp HHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECS--STTHHHHHHHHHHHHSTTEEEECSSCSHHHHH-HHTHHHHHHH
T ss_pred HHhCCceEEEECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhCCCeEEeCCCCCHHHHH-HHHHHHHHHH
Confidence 99999999999999999999999999999999986 68899999999998877899999999999996 9999999999
Q ss_pred hhhCCCCCEEEEecCchhHHHHHHHHHHhhC-CCcEEEEEeCCCCccccC----CCC-----CceeecccCCcccc
Q 025563 178 KDSGGDVDILVAGIGTGGTVTGSGRFLKEKN-PNIKVYGVEPTESAMLNG----GQP-----GRLLFFLFFLFFFC 243 (251)
Q Consensus 178 ~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~-~~~~vigVep~~s~~~~~----~~~-----~~~~i~g~g~~~~~ 243 (251)
+|+++.+|+||+|+|+||+++|++.++++.+ |+++|++|||++++++.. +.+ .....+||+.+.++
T Consensus 190 ~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~~~~~~~~~~~~g~~~~~~~~~tia~gl~~~~~~ 265 (364)
T 4h27_A 190 ETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVG 265 (364)
T ss_dssp HHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSCC
T ss_pred HHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecCCChHHHHHHHCCCcccCCCCCcHHHHhCCCCCc
Confidence 9997679999999999999999999999886 889999999999987642 221 23445677776654
No 20
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=100.00 E-value=7.1e-48 Score=348.28 Aligned_cols=229 Identities=16% Similarity=0.160 Sum_probs=193.9
Q ss_pred cccccchhhHHHHHHHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEE
Q 025563 4 EASMEDNHHKRAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIE 83 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~ 83 (251)
+++|++..+ ..+++...+++|||+++++|++.+|.+||+|+|++||+||||+|++.+++.++.++|. . +||+
T Consensus 27 ~~~~~ry~~---~~p~~~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdRga~~~l~~a~~~g~----~-~vv~ 98 (372)
T 1p5j_A 27 GQQMGRGSE---FMMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC----A-HFVC 98 (372)
T ss_dssp ----------------CCCSSCCCCEEEEHHHHHHHTSCEEEECGGGSGGGBTTHHHHHHHHHHHHHTTC----C-EEEE
T ss_pred CCccccHHH---hcccccCCCCCCCceEcHhhHHHhCCEEEEEEcCCCCCCChHHHHHHHHHHHHHHcCC----C-EEEE
Confidence 344554443 3445678899999999999988888999999999999999999999999999988763 3 4999
Q ss_pred eccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCc
Q 025563 84 TTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPA 163 (251)
Q Consensus 84 ~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~ 163 (251)
+|+||||+|+|++|+++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++.++.+|++||+|+.
T Consensus 99 aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~a~~~a~~l~~~~~~~~~v~~~~n~~ 176 (372)
T 1p5j_A 99 SSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPL 176 (372)
T ss_dssp CCSSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--CHHHHHHHHHHHHHHSTTEEECCSSCCHH
T ss_pred eCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhcCCcEEeCCCCCHH
Confidence 9999999999999999999999999999999999999999999999987 68999999999988866899999999999
Q ss_pred hHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhC-CCcEEEEEeCCCCccccC----CCC----C-cee
Q 025563 164 NPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKN-PNIKVYGVEPTESAMLNG----GQP----G-RLL 233 (251)
Q Consensus 164 ~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~-~~~~vigVep~~s~~~~~----~~~----~-~~~ 233 (251)
+++ ||.+++.||++|+...+|+||+|+|+||+++|++.++++.+ |++||++|||++|+++.. +.+ + ...
T Consensus 177 ~~~-G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~~~~~~~~~~~g~~~~~~~~~ti 255 (372)
T 1p5j_A 177 IWE-GHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSV 255 (372)
T ss_dssp HHH-HHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHHHHHHTSCCCCSCCCCS
T ss_pred HHh-hHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCCChHHHHHHHcCCceecCCCcee
Confidence 996 99999999999997679999999999999999999999986 889999999999987642 221 1 345
Q ss_pred ecccCCcccc
Q 025563 234 FFLFFLFFFC 243 (251)
Q Consensus 234 i~g~g~~~~~ 243 (251)
.+||+.+.++
T Consensus 256 a~gl~~~~~~ 265 (372)
T 1p5j_A 256 AKALGVKTVG 265 (372)
T ss_dssp CGGGCCSSCC
T ss_pred ecccCCCCCC
Confidence 5677776655
No 21
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-47 Score=336.81 Aligned_cols=213 Identities=21% Similarity=0.194 Sum_probs=190.5
Q ss_pred cccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCC
Q 025563 22 QLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAFIAALRG 101 (251)
Q Consensus 22 ~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G 101 (251)
..+.+|||+++++|++.+|.+||+|+|++||+||||+|++.+++.++.++|. . +||++|+||||+|+|++|+++|
T Consensus 3 ~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptgS~K~R~a~~~l~~a~~~g~----~-~vv~~ssGN~g~alA~~a~~~G 77 (318)
T 2rkb_A 3 PFHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKGC----R-HLVCSSGGNAGIAAAYAARKLG 77 (318)
T ss_dssp CSSCCCCEEEEHHHHHHHTSCEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC----C-EEEECCCSHHHHHHHHHHHHHT
T ss_pred CCCccCCceehHhhHHHhCCeEEEEecCCCCCCCHHHHHHHHHHHHHHHcCC----C-EEEEECCchHHHHHHHHHHHcC
Confidence 3578999999999988888999999999999999999999999999988763 3 4999999999999999999999
Q ss_pred CcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhC
Q 025563 102 YKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSG 181 (251)
Q Consensus 102 ~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~ 181 (251)
++|+||||+++++.|+++++.+||+|+.+++ +++++.+.+++++++. +.+|++||+|+.+++ ||.+++.||++|+.
T Consensus 78 ~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~--~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~-g~~t~~~Ei~~q~~ 153 (318)
T 2rkb_A 78 IPATIVLPESTSLQVVQRLQGEGAEVQLTGK--VWDEANLRAQELAKRD-GWENVPPFDHPLIWK-GHASLVQELKAVLR 153 (318)
T ss_dssp CCEEEEECTTCCHHHHHHHHHTTCEEEECCS--SHHHHHHHHHHHHHST-TEEECCSSCSHHHHH-HHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCcHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEeCCCCChhhcc-chhHHHHHHHHhcC
Confidence 9999999999999999999999999999987 6899999999998885 899999999999996 99999999999997
Q ss_pred CCCCEEEEecCchhHHHHHHHHHHhhC-CCcEEEEEeCCCCccccC----CCC-----CceeecccCCcccc
Q 025563 182 GDVDILVAGIGTGGTVTGSGRFLKEKN-PNIKVYGVEPTESAMLNG----GQP-----GRLLFFLFFLFFFC 243 (251)
Q Consensus 182 ~~~d~vv~~vGtGg~~~Gi~~~~~~~~-~~~~vigVep~~s~~~~~----~~~-----~~~~i~g~g~~~~~ 243 (251)
..+|+||+|+|+||+++|++.++++.+ |++||++|||++|+++.. +.+ .....+||+.+++|
T Consensus 154 ~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~~~~~~g~~~~~~~~~t~a~gl~~~~~~ 225 (318)
T 2rkb_A 154 TPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHGAHCFNAAITAGKLVTLPDITSVAKSLGAKTVA 225 (318)
T ss_dssp SCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETTBCHHHHHHHHTSCCBCSCCCSSCGGGCCSBCC
T ss_pred CCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCCChHHHHHHHcCCcccCCCCCceecccCCCCCC
Confidence 679999999999999999999999885 889999999999987632 221 13456678877665
No 22
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=100.00 E-value=2e-47 Score=343.01 Aligned_cols=227 Identities=21% Similarity=0.206 Sum_probs=201.2
Q ss_pred ccccchhhHHHH---HHHhhcccCCCcceec--ccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCe
Q 025563 5 ASMEDNHHKRAI---KKDATQLIGNTPMVYL--NNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKS 79 (251)
Q Consensus 5 ~~~~~~~~~~~~---~~~v~~~~~~TPl~~~--~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~ 79 (251)
.+|+++.+.++. .+++.+.+++|||+++ ++|++..|++||+|+|++||+||||+|++.+++.++.++|. .
T Consensus 4 ~~~~ry~~~lp~~~~~~~v~~~~g~TPL~~~~~~~l~~~~g~~v~~K~E~~~ptgS~KdR~a~~~l~~a~~~g~----~- 78 (351)
T 3aey_A 4 PLIERYRNLLPVSEKTPVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGA----Q- 78 (351)
T ss_dssp CHHHHTGGGTTCCTTSCCCCSCCCCCCEEECCCCHHHHTTTCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC----S-
T ss_pred CcccccHhhCCCcccCCceecCCCCCCeeecCchhhHHHhCCeEEEEecCCCCcccHHHHHHHHHHHHHHhcCC----C-
Confidence 567777777764 2578999999999999 99988889999999999999999999999999999998874 3
Q ss_pred EEEEeccChHHHHHHHHHHHCCCcEEEEecCC-CcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCC
Q 025563 80 VLIETTGGNTGIGLAFIAALRGYKLIIVMPSI-ASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQ 158 (251)
Q Consensus 80 ~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 158 (251)
+||++|+||||+|+|++|+++|++|+||||++ ++..|+++++.+||+|+.+++ +++++.+.+++++++. +.+|+++
T Consensus 79 ~vv~~SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~l~~~~-~~~~~~~ 155 (351)
T 3aey_A 79 AVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEG--NFDDALRLTQKLTEAF-PVALVNS 155 (351)
T ss_dssp EEEESCSSHHHHHHHHHHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHHS-SEEECST
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CcEecCC
Confidence 49999999999999999999999999999998 999999999999999999997 5899999999998887 5888988
Q ss_pred CCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCC------CcEEEEEeCCCCccccCCCCC--
Q 025563 159 FENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNP------NIKVYGVEPTESAMLNGGQPG-- 230 (251)
Q Consensus 159 ~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~------~~~vigVep~~s~~~~~~~~~-- 230 (251)
+|+.+++ ||.+++.||++|+...+|+||+|+|+||+++|++.++++.++ .+||++|||++++++..+.+.
T Consensus 156 -~n~~~~~-g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~ 233 (351)
T 3aey_A 156 -VNPHRLE-GQKTLAFEVVDELGDAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLVLGRPVER 233 (351)
T ss_dssp -TCHHHHH-HHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHHTSCSSCCEEEEEEEGGGCHHHHTSCCSS
T ss_pred -CCcccee-eeeeHHHHHHHHcCCCCCEEEEecCchHHHHHHHHHHHHHHhccccCCCCeEEEEecCCCChhhcCcccCC
Confidence 8999985 999999999999976799999999999999999999998753 699999999999877544432
Q ss_pred -ceeecccCCcc
Q 025563 231 -RLLFFLFFLFF 241 (251)
Q Consensus 231 -~~~i~g~g~~~ 241 (251)
...++||+.+.
T Consensus 234 ~~t~a~gl~~~~ 245 (351)
T 3aey_A 234 PETLATAIRIGN 245 (351)
T ss_dssp CCCSCGGGCCSS
T ss_pred ccchhHhhcCCC
Confidence 34568888765
No 23
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.6e-47 Score=343.32 Aligned_cols=227 Identities=21% Similarity=0.233 Sum_probs=198.7
Q ss_pred cccchhhHHHH---HHHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEE
Q 025563 6 SMEDNHHKRAI---KKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLI 82 (251)
Q Consensus 6 ~~~~~~~~~~~---~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv 82 (251)
.|+++.+.++. .+++.+.+++|||+++++|++.+|++||+|+|++||+||||+|++.+++.++.++|. .+||
T Consensus 15 ~~~ry~~~lp~~~~~~~v~~~~g~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~l~~a~~~g~-----~~vv 89 (360)
T 2d1f_A 15 VIAAYRDRLPVGDDWTPVTLLEGGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHGQ-----RAVL 89 (360)
T ss_dssp HHHHTGGGSCCCSSCCCCCCCCCCCCEEECHHHHHHHSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----SEEE
T ss_pred chhhhHHhCCCcccCCccccccCCCCCeechhhHHHhCCeEEEEECCCCCCcCHHHHHHHHHHHHHHHCCC-----CEEE
Confidence 44455555543 246888999999999999988889999999999999999999999999999998874 3499
Q ss_pred EeccChHHHHHHHHHHHCCCcEEEEecCC-CcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCC
Q 025563 83 ETTGGNTGIGLAFIAALRGYKLIIVMPSI-ASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFEN 161 (251)
Q Consensus 83 ~~ssGN~g~alA~~a~~~G~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n 161 (251)
++|+||||+|+|++|+++|++|+||||++ ++..|+++++.+||+|+.+++ +++++.+.+++++++.++.+|+++ +|
T Consensus 90 ~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~--~~~~~~~~a~~l~~~~~~~~~i~~-~n 166 (360)
T 2d1f_A 90 CASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDG--NFDDCLELARKMAADFPTISLVNS-VN 166 (360)
T ss_dssp ECCSSHHHHHHHHHHHHHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSS--CHHHHHHHHHHHHHHCTTEEECST-TC
T ss_pred EeCCcHHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhcCCeEEcCC-CC
Confidence 99999999999999999999999999998 999999999999999999997 589999999999988755889988 89
Q ss_pred CchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCC------CcEEEEEeCCCCccccCCCCC---ce
Q 025563 162 PANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNP------NIKVYGVEPTESAMLNGGQPG---RL 232 (251)
Q Consensus 162 ~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~------~~~vigVep~~s~~~~~~~~~---~~ 232 (251)
+.+++ ||.+++.||++|+...+|+||+|+|+||+++|++.++++.++ .+||++|||++++++..+.+. ..
T Consensus 167 ~~~~~-g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t 245 (360)
T 2d1f_A 167 PVRIE-GQKTAAFEIVDVLGTAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQAAGAAPLVLGEPVSHPET 245 (360)
T ss_dssp HHHHH-HHTHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEEGGGCHHHHSSCCSSCCC
T ss_pred hhhhh-hHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHHHHHHhccccccCceEEEEecCCCCHHhcCCccCCccc
Confidence 99996 999999999999976799999999999999999999998753 699999999999887655432 34
Q ss_pred eecccCCcc
Q 025563 233 LFFLFFLFF 241 (251)
Q Consensus 233 ~i~g~g~~~ 241 (251)
..+||+.+.
T Consensus 246 ~a~gl~~~~ 254 (360)
T 2d1f_A 246 IATAIRIGS 254 (360)
T ss_dssp SCGGGCCSS
T ss_pred hHHHhCCCC
Confidence 567888765
No 24
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=100.00 E-value=3.9e-47 Score=341.23 Aligned_cols=226 Identities=22% Similarity=0.197 Sum_probs=198.6
Q ss_pred cccchhhHHHH---HHHhhcccCCCcceecccccccCCce--EEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeE
Q 025563 6 SMEDNHHKRAI---KKDATQLIGNTPMVYLNNVVDGCVAR--IAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSV 80 (251)
Q Consensus 6 ~~~~~~~~~~~---~~~v~~~~~~TPl~~~~~l~~~~g~~--i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~ 80 (251)
.|+++.+.++. .+++.+.+|+|||+++++|++.+|++ ||+|+|++||+||||+|++.+++.++.++|. .+
T Consensus 7 ~~~ry~~~lp~~~~~~~v~~~~g~TPL~~~~~l~~~~g~~~~i~~K~E~~~ptGS~KdR~a~~~l~~a~~~g~-----~~ 81 (352)
T 2zsj_A 7 IIKQYKKYLPVDENTPIVTLYEGNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVEAGK-----RA 81 (352)
T ss_dssp HHHHSGGGSSCCTTCCCCCCCCCCCCEEECHHHHHHHTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----CE
T ss_pred cceeeHhhCCCccCCCceecccCCCCCeehHHHHHHhCCCceEEEEECCCCCCccHHHHHHHHHHHHHHhcCC-----CE
Confidence 45555555543 35788999999999999998888888 9999999999999999999999999998874 34
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCC-CcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSI-ASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQF 159 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 159 (251)
||++|+||||+|+|++|+++|++|+||||++ ++..|+++++.+||+|+.+++ +++++.+.+++++++. +.+|+++
T Consensus 82 vv~~SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~--~~~~~~~~a~~l~~~~-~~~~~~~- 157 (352)
T 2zsj_A 82 VICASTGNTSASAAAYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQG--TFDDALNIVRKIGENF-PVEIVNS- 157 (352)
T ss_dssp EEECCSSHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEEEEESS--CHHHHHHHHHHHHHHS-SEEECST-
T ss_pred EEEeCCchHHHHHHHHHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHHc-CcEECCC-
Confidence 9999999999999999999999999999998 999999999999999999997 5899999999998887 5888988
Q ss_pred CCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCC------CcEEEEEeCCCCccccCCCC---C
Q 025563 160 ENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNP------NIKVYGVEPTESAMLNGGQP---G 230 (251)
Q Consensus 160 ~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~------~~~vigVep~~s~~~~~~~~---~ 230 (251)
+|+.+++ ||.+++.||++|+...+|+||+|+|+||+++|++.++++.++ .+||++|||++++++..+.+ .
T Consensus 158 ~n~~~~~-g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~ 236 (352)
T 2zsj_A 158 VNPYRIE-GQKTAAFEICDTLGEAPDYHFIPVGNAGNITAYWKGFKIYYEEGKITKLPRMMGWQAEGAAPIVKGYPIKNP 236 (352)
T ss_dssp TCTHHHH-HHTHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEETTBCHHHHTSCCSSC
T ss_pred CCcchhh-hHhHHHHHHHHHcCCCCCEEEEeCCCcHHHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCcHHhcCCccCCC
Confidence 8999985 999999999999976799999999999999999999998753 69999999999987754433 2
Q ss_pred ceeecccCCcc
Q 025563 231 RLLFFLFFLFF 241 (251)
Q Consensus 231 ~~~i~g~g~~~ 241 (251)
...++||+.+.
T Consensus 237 ~t~a~gl~~~~ 247 (352)
T 2zsj_A 237 QTIATAIKIGN 247 (352)
T ss_dssp CCSCGGGCCSS
T ss_pred cchhHHhcCCC
Confidence 34568888765
No 25
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=100.00 E-value=2.3e-46 Score=345.22 Aligned_cols=219 Identities=19% Similarity=0.235 Sum_probs=192.1
Q ss_pred cccccchhhHHHHHHHhhc----------------ccCCCcceeccccc----ccCC----ceEEEEeCCCCC-CCchhh
Q 025563 4 EASMEDNHHKRAIKKDATQ----------------LIGNTPMVYLNNVV----DGCV----ARIAAKLEMMEP-CCSVKD 58 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~v~~----------------~~~~TPl~~~~~l~----~~~g----~~i~~K~E~~~p-tGS~K~ 58 (251)
+..|.++++|..+..++.. .+++|||+++++|+ +.+| .+||+|+|++|| +||||+
T Consensus 40 ~~~~~~~~di~~a~~~l~~~~~~l~~~~~~~~~~~g~~~TPL~~~~~l~~~l~~~~g~~~~~~v~lK~E~~~p~tGSfK~ 119 (442)
T 3ss7_X 40 PYVGLTEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKA 119 (442)
T ss_dssp GGTSCCHHHHHHHHHHHHHHHHHHHHHSGGGGGGTTCCCCCEEECHHHHHHHHHHHTCCCCSEEEEEEGGGCTTTSBTHH
T ss_pred CcCCCCHHHHHHHHHHHHhCHHhHhhhChhhhccCCCCCCCcEEhHhhhhHHHHhhCCCcCCeEEEeecCCCCCCCCcHH
Confidence 3445567888888777664 35799999999887 5554 799999999999 999999
Q ss_pred HHHHHHHHH-----HHHcCCCCCCC----------------eEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHH
Q 025563 59 RIALSMIKD-----AEEKGLITPGK----------------SVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERR 117 (251)
Q Consensus 59 R~a~~~l~~-----a~~~g~~~~g~----------------~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~ 117 (251)
|++.+++.. ++++|.+.+|. .+||++|+||||+|+|++|+++|++|+||||.+++..|+
T Consensus 120 Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~~r~~~~~~~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~ 199 (442)
T 3ss7_X 120 RGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKK 199 (442)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHHHHHHHHTSEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHH
T ss_pred HHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhhhhhhccCcEEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHH
Confidence 999999986 78889887765 359999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCC--------CCCEEEE
Q 025563 118 IVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGG--------DVDILVA 189 (251)
Q Consensus 118 ~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~--------~~d~vv~ 189 (251)
++++.+||+|+.+++ +|+++.+.+++++++.++.||++++ |+.++..||.|++.||++|+.. .||+||+
T Consensus 200 ~~~r~~GA~Vv~v~~--~~~~a~~~a~~~a~~~~~~~~i~~~-n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~Vvv 276 (442)
T 3ss7_X 200 AKLRSHGVTVVEYEQ--DYGVAVEEGRKAAQSDPNCFFIDDE-NSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYL 276 (442)
T ss_dssp HHHHHTTCEEEEESS--CHHHHHHHHHHHHHTCTTEEECCTT-TCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEE
T ss_pred HHHHHCCCEEEEECC--CHHHHHHHHHHHHHhCCCceeCCCC-ChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEE
Confidence 999999999999997 6999999999999887678999985 5555557999999999999842 3669999
Q ss_pred ecCchhHHHHHHHHHHhh-CCCcEEEEEeCCCCcccc
Q 025563 190 GIGTGGTVTGSGRFLKEK-NPNIKVYGVEPTESAMLN 225 (251)
Q Consensus 190 ~vGtGg~~~Gi~~~~~~~-~~~~~vigVep~~s~~~~ 225 (251)
|+|+||+++|++.+|++. +|++||+||||++++++.
T Consensus 277 pvG~GG~~aGi~~~lk~~~~~~v~vigVep~~~~~~~ 313 (442)
T 3ss7_X 277 PCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCML 313 (442)
T ss_dssp ECSSSHHHHHHHHHHHHHHGGGEEEEEEEETTCCHHH
T ss_pred EeCCchHHHHHHHHHHHhcCCCCEEEEEEeCCchHHH
Confidence 999999999999999987 799999999999998753
No 26
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=100.00 E-value=7.3e-47 Score=351.97 Aligned_cols=206 Identities=25% Similarity=0.296 Sum_probs=189.5
Q ss_pred chhhHHHHHHHhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccCh
Q 025563 9 DNHHKRAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGN 88 (251)
Q Consensus 9 ~~~~~~~~~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN 88 (251)
++++|..+ ++...+++|||+++++|++.+|++||+|+|++||+||||+|++.+++..+.++.. ..+||++|+||
T Consensus 16 ~~~~i~~a--~i~~~i~~TPL~~l~~Ls~~~g~~V~lK~E~lqPtgSfKdRgA~n~i~~l~~~~~----~~gVV~aSsGN 89 (514)
T 1tdj_A 16 YLRAVLRA--PVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQK----AHGVITASAGN 89 (514)
T ss_dssp HHHHHHHC--CGGGTCCCCCEEECHHHHHHTTSEEEEECGGGSTTSSSTHHHHHHHHHTTTTSSC----SSSCEEEECSS
T ss_pred hHHHHHHH--hHhcccCCCCcEEchhhHHhhCCeEEEEECCCCCcccHHHHHHHHHHHHHHHhcC----CCEEEEECCcH
Confidence 36666666 8999999999999999998899999999999999999999999999988764432 22399999999
Q ss_pred HHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHH
Q 025563 89 TGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIH 168 (251)
Q Consensus 89 ~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g 168 (251)
||+|+|++|+++|++|+||||.+++..|+++++.+||+|+.+++ +++++.+.+++++++. +.+|++||+|+.++. |
T Consensus 90 hg~avA~aa~~lGi~~~IvmP~~~p~~Kv~~~r~~GAeVvlv~~--~~dda~~~a~ela~e~-g~~~v~pfdnp~~ia-G 165 (514)
T 1tdj_A 90 HAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGA--NFDEAKAKAIELSQQQ-GFTWVPPFDHPMVIA-G 165 (514)
T ss_dssp SHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCS--SHHHHHHHHHHHHHHH-CCEECCSSCCHHHHH-H
T ss_pred HHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhc-CCEeeCCCCCHHHHH-H
Confidence 99999999999999999999999999999999999999999986 6999999999999886 789999999999994 9
Q ss_pred HhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCcccc
Q 025563 169 YETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLN 225 (251)
Q Consensus 169 ~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~ 225 (251)
|.|++.||++|+.+ +|+||+|+|+||+++|++.++|+.+|++||+||||++|+++.
T Consensus 166 qgTig~EI~eQl~~-~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~~a~~l~ 221 (514)
T 1tdj_A 166 QGTLALELLQQDAH-LDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLK 221 (514)
T ss_dssp HHHHHHHHHHHCTT-CCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTTCHHH
T ss_pred HHHHHHHHHHHCCC-CCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEeccCChhHH
Confidence 99999999999954 999999999999999999999999999999999999998875
No 27
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=100.00 E-value=2.6e-45 Score=326.06 Aligned_cols=209 Identities=21% Similarity=0.182 Sum_probs=186.0
Q ss_pred hhHHHHHHHhhcccCCCcceecccccccCCceEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEEe--cc
Q 025563 11 HHKRAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEP--CCSVKDRIALSMIKDAEEKGLITPGKSVLIET--TG 86 (251)
Q Consensus 11 ~~~~~~~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~p--tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~--ss 86 (251)
.+....++++...+++|||+++++|++..|++||+|+|++|| +||||+|.+.+++.+++++|. . +||++ |+
T Consensus 6 ~~~l~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~~~G~----~-~vv~~G~ss 80 (325)
T 1j0a_A 6 FALLAKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGA----D-VVITVGAVH 80 (325)
T ss_dssp HHHHTTCCCCCCCCSCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTC----S-EEEEECCTT
T ss_pred hhhhccCCCcccccCCCCceEhhhhhhhhCCEEEEEecccCCCCCCchHHHHHHHHHHHHHHcCC----C-EEEEcCCcc
Confidence 344556678999999999999999988788999999999999 999999999999999999885 3 38886 99
Q ss_pred ChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHHcCCEEEEeCCCCCh---HHHHHHHHHHhhcCCCeE-ecCCCCC
Q 025563 87 GNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRALGAEVYLADQAGGF---EGILRKGEEILSNTPNGF-MFRQFEN 161 (251)
Q Consensus 87 GN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~v~~~~~~---~~~~~~a~~~~~~~~~~~-~~~~~~n 161 (251)
||||+|+|++|+++|++|++|||++. +..|++.++.+||+|+.+++..+. +++.+.+++++++.+..| +.+++.|
T Consensus 81 GN~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n 160 (325)
T 1j0a_A 81 SNHAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGAS 160 (325)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEESCCCSCHHHHHHHHTTCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCS
T ss_pred hHHHHHHHHHHHHhCCcEEEEECCCCCCCchHHHHHHCCCEEEEeCcchhhhhhHHHHHHHHHHHHcCCceEEEcCCCCC
Confidence 99999999999999999999999999 999999999999999999986332 267788889988875434 4567789
Q ss_pred CchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCcccc
Q 025563 162 PANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLN 225 (251)
Q Consensus 162 ~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~ 225 (251)
+.+.+ ||.+++.||++|++..+|+||+|+||||+++|++.++++.+|++||+||||++++++.
T Consensus 161 ~~~~~-g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~~~~~~~ 223 (325)
T 1j0a_A 161 PIGTL-GYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVM 223 (325)
T ss_dssp HHHHT-HHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECSSCSSSH
T ss_pred HHHHH-HHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEecCchHHH
Confidence 98885 8999999999999668999999999999999999999999999999999999998765
No 28
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=100.00 E-value=5.2e-46 Score=335.55 Aligned_cols=198 Identities=24% Similarity=0.329 Sum_probs=182.9
Q ss_pred HhhcccCCCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHHHHH
Q 025563 19 DATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAFIAA 98 (251)
Q Consensus 19 ~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~ 98 (251)
++...+++|||+++++|++.+|.+||+|+|++||+||||||++.+++.++.+++. ..+||++|+||||+|+|++|+
T Consensus 53 ~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfKdRga~~~i~~l~~~~~----~~~vv~assGN~g~a~A~aa~ 128 (366)
T 3iau_A 53 PVYDVAIESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSREEL----DKGVITASAGNHAQGVALAGQ 128 (366)
T ss_dssp CGGGTCCCCCEEECHHHHHHHTSEEEEEEGGGSTTSBTTHHHHHHHHHTSCHHHH----HHCEEEECSSHHHHHHHHHHH
T ss_pred HHhhhcCCCCcEEhhhhhHhhCCEEEEEecCCCCCcchHHHHHHHHHHHHHHhCC----CCEEEEeCCCHHHHHHHHHHH
Confidence 6778899999999999999889999999999999999999999999987543221 123999999999999999999
Q ss_pred HCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhh
Q 025563 99 LRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWK 178 (251)
Q Consensus 99 ~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~ 178 (251)
++|++|+||||++++..|+++++.+||+|+.+++ +|+++.+.+++++++. +++|++||+|+.++ .||.+++.||++
T Consensus 129 ~~G~~~~iv~P~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~~~~~~-~~~~i~~~~n~~~i-~g~~t~~~Ei~~ 204 (366)
T 3iau_A 129 RLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYGK--TFDEAQTHALELSEKD-GLKYIPPFDDPGVI-KGQGTIGTEINR 204 (366)
T ss_dssp HTTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--SHHHHHHHHHHHHHHH-TCEECCSSSSHHHH-HHHHHHHHHHHH
T ss_pred HhCCceEEEeCCCCCHHHHHHHHHCCCeEEEECc--CHHHHHHHHHHHHHhc-CCEecCCCCChHHH-HHHHHHHHHHHH
Confidence 9999999999999999999999999999999985 6999999999998886 89999999999998 599999999999
Q ss_pred hhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCcccc
Q 025563 179 DSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLN 225 (251)
Q Consensus 179 q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~ 225 (251)
|+ +.+|+||+|+|+||+++|++.++++.+|++||++|||++++++.
T Consensus 205 q~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~~~~~~l~ 250 (366)
T 3iau_A 205 QL-KDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGAASMT 250 (366)
T ss_dssp HC-CSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGGCHHH
T ss_pred hc-CCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEeecCChHHH
Confidence 99 78999999999999999999999999999999999999998765
No 29
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=100.00 E-value=4.7e-45 Score=332.67 Aligned_cols=230 Identities=18% Similarity=0.160 Sum_probs=190.5
Q ss_pred chhhHHHHHHHhh--cccCCCcceecccccccCC-ceEEEEeCCCC-CCCchhhHHHHHHHHHHH--HcCC----C----
Q 025563 9 DNHHKRAIKKDAT--QLIGNTPMVYLNNVVDGCV-ARIAAKLEMME-PCCSVKDRIALSMIKDAE--EKGL----I---- 74 (251)
Q Consensus 9 ~~~~~~~~~~~v~--~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~-ptGS~K~R~a~~~l~~a~--~~g~----~---- 74 (251)
+++++..+...+. ..+++|||+++++|++.+| .+||+|+|++| |+||||+|++.+++.+++ +.|. +
T Consensus 25 ~~~~~~~a~~~~~~~~~~~~TPL~~~~~l~~~~g~~~i~~K~E~~~~ptgSfK~Rga~~~i~~~~~~~~G~~~~~l~~e~ 104 (398)
T 4d9i_A 25 SQSQAKLARQFHQKIAGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFXMLGGAYAIAQLLCEKYHLDIETLSFEH 104 (398)
T ss_dssp SHHHHHHHHHHHTTSTTCCCCCEEECHHHHHHHTSSEEEEEEGGGSTTTTBSTHHHHHHHHHHHHHHHHTCCGGGCCHHH
T ss_pred CHHHHHHHHHHHhhCCCCCCCCceehHHHHHHhCCCcEEEEECCCCCCCCcchhhhhHHHHHHHHHHhhcccccccchhh
Confidence 4667777777665 4589999999999998888 59999999999 999999999999999884 2331 0
Q ss_pred ----CCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 75 ----TPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 75 ----~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
.+...+||++|+||||+|+|++|+++|++|+||||++++..|+++++.+||+|+.+++ +|+++.+.+++++++.
T Consensus 105 l~~~~~~~~~vv~aSsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~--~~~~a~~~a~~~~~~~ 182 (398)
T 4d9i_A 105 LKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDM--NYDDTVRLTMQHAQQH 182 (398)
T ss_dssp HHHCCSCCCEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHTTTCEEEECSS--CHHHHHHHHHHHHHHH
T ss_pred hhhhccCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHHc
Confidence 1223149999999999999999999999999999999999999999999999999997 6899999999998887
Q ss_pred CCeEecCC-----CC-CCchHHHHHhhHHHHHhhhhCCC---CCEEEEecCchhHHHHHHHHHHhh--CCCcEEEEEeCC
Q 025563 151 PNGFMFRQ-----FE-NPANPKIHYETTGPEIWKDSGGD---VDILVAGIGTGGTVTGSGRFLKEK--NPNIKVYGVEPT 219 (251)
Q Consensus 151 ~~~~~~~~-----~~-n~~~~~~g~~t~~~EI~~q~~~~---~d~vv~~vGtGg~~~Gi~~~~~~~--~~~~~vigVep~ 219 (251)
+++|++| |+ |+.+...||.|++.||++|+... ||+||+|+|+||+++|++.++++. .+++||++|||+
T Consensus 183 -g~~~v~~~~~~g~~~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep~ 261 (398)
T 4d9i_A 183 -GWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPD 261 (398)
T ss_dssp -TCEECCSSCBTTBCHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEET
T ss_pred -CCEEecCcccCCcCCCCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEeC
Confidence 8899986 65 34555579999999999998544 999999999999999999999876 478999999999
Q ss_pred CCcccc----CCCCCc--eeecccCCcc
Q 025563 220 ESAMLN----GGQPGR--LLFFLFFLFF 241 (251)
Q Consensus 220 ~s~~~~----~~~~~~--~~i~g~g~~~ 241 (251)
+++++. .+.+.+ ..+++|+.|+
T Consensus 262 ~~~~~~~s~~~g~~~~~~~~~~tia~gl 289 (398)
T 4d9i_A 262 KADCIYRSGVKGDIVNVGGDMATIMAGL 289 (398)
T ss_dssp TSCHHHHHHHHTSCCCC------CCTTC
T ss_pred CCchHHHHHHcCCceecCCCCCceeccc
Confidence 998875 344433 2355566554
No 30
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=100.00 E-value=5.5e-45 Score=326.07 Aligned_cols=221 Identities=18% Similarity=0.164 Sum_probs=186.0
Q ss_pred HHHHHHHhhcccCCCcceecccccccCCceEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEEec--cCh
Q 025563 13 KRAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEP--CCSVKDRIALSMIKDAEEKGLITPGKSVLIETT--GGN 88 (251)
Q Consensus 13 ~~~~~~~v~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~p--tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~s--sGN 88 (251)
+..+++++...+++|||+++++|++.+|++||+|+|++|| +||||+|++.+++.+++++|. + +||++| +||
T Consensus 19 ~~~a~~ri~~~~~~TPL~~~~~l~~~~g~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~----~-~vv~~s~tsGN 93 (342)
T 4d9b_A 19 HLTRFPRLEFIGAPTPLEYLPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGA----D-TLITAGAIQSN 93 (342)
T ss_dssp GGGGSCCCCSSCSCCCEEECHHHHHHHTSCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTC----C-EEEEEEETTCH
T ss_pred hhccCCcccccCCCCceeEhhhhHHhhCCEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCC----C-EEEEcCCcccH
Confidence 3667789999999999999999988889999999999999 999999999999999999885 3 488886 699
Q ss_pred HHHHHHHHHHHCCCcEEEEecCCCcH--------HHHHHHHHcCCEEEEeCCCCChHHHHH-HHHHHhhcCCCeEec-CC
Q 025563 89 TGIGLAFIAALRGYKLIIVMPSIASM--------ERRIVLRALGAEVYLADQAGGFEGILR-KGEEILSNTPNGFMF-RQ 158 (251)
Q Consensus 89 ~g~alA~~a~~~G~~~~ivvp~~~~~--------~~~~~~~~~Ga~v~~v~~~~~~~~~~~-~a~~~~~~~~~~~~~-~~ 158 (251)
||+|+|++|+++|++|+||||++++. .|++.++.+||+|+.+++..+++++.+ .++++.++.+..|++ .+
T Consensus 94 ~g~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~ 173 (342)
T 4d9b_A 94 HVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYVIPVG 173 (342)
T ss_dssp HHHHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCCSSHHHHHHHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEEEECchhhHHHHHHHHHHHHHhcCCceEEeCCC
Confidence 99999999999999999999988763 589999999999999998655566654 567777765333433 35
Q ss_pred CCCCchHHHHHhhHHHHHhhhhC--CCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCccccCCCC---Ccee
Q 025563 159 FENPANPKIHYETTGPEIWKDSG--GDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLNGGQP---GRLL 233 (251)
Q Consensus 159 ~~n~~~~~~g~~t~~~EI~~q~~--~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~~~~~---~~~~ 233 (251)
+.|+.+. .||.+++.||++|+. ..+|+||+|+||||+++|++.++++.+|++||+||||++++.+..... .+..
T Consensus 174 ~~n~~~~-~G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~t~ 252 (342)
T 4d9b_A 174 GSSALGA-MGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSRSVAEQKPKVIALQQAI 252 (342)
T ss_dssp GCSHHHH-HHHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSSCHHHHHHHHHHHHHHH
T ss_pred CCChHHH-HHHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecCcHHHHHHHHHHHHHHH
Confidence 5677776 499999999999996 479999999999999999999999999999999999999987653211 1233
Q ss_pred ecccCC
Q 025563 234 FFLFFL 239 (251)
Q Consensus 234 i~g~g~ 239 (251)
.+|||.
T Consensus 253 a~gl~~ 258 (342)
T 4d9b_A 253 AGQLAL 258 (342)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 456666
No 31
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=100.00 E-value=3.1e-45 Score=327.53 Aligned_cols=203 Identities=16% Similarity=0.107 Sum_probs=181.0
Q ss_pred HHHhhcccCCCcceecccccccC-C-ceEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEE--eccChH
Q 025563 17 KKDATQLIGNTPMVYLNNVVDGC-V-ARIAAKLEMME-P--CCSVKDRIALSMIKDAEEKGLITPGKSVLIE--TTGGNT 89 (251)
Q Consensus 17 ~~~v~~~~~~TPl~~~~~l~~~~-g-~~i~~K~E~~~-p--tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~--~ssGN~ 89 (251)
++++...+++|||+++++|++.+ | .+||+|+|++| | +||||+|++.+++.++.++|. . +||+ +|+|||
T Consensus 6 ~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~~g~----~-~vv~~G~ssGN~ 80 (341)
T 1f2d_A 6 FAKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDY----T-HLVSIGGRQSNQ 80 (341)
T ss_dssp SCCCCCSSSSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCC----S-EEEEEEETTCHH
T ss_pred CCCcccCCCCCcceeHHhHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC----C-EEEEcCCcchHH
Confidence 35678899999999999998888 8 89999999999 9 999999999999999998875 3 4889 999999
Q ss_pred HHHHHHHHHHCCCcEEEEecCCCc-----HH------HHHHHHHcCCEEEEeCCCCCh---HHHHHHHHHHhhcCCCeE-
Q 025563 90 GIGLAFIAALRGYKLIIVMPSIAS-----ME------RRIVLRALGAEVYLADQAGGF---EGILRKGEEILSNTPNGF- 154 (251)
Q Consensus 90 g~alA~~a~~~G~~~~ivvp~~~~-----~~------~~~~~~~~Ga~v~~v~~~~~~---~~~~~~a~~~~~~~~~~~- 154 (251)
|+|+|++|+++|++|++|||...+ +. |++.++.+||+|+.+++..+. +++.+.+++++++.+..+
T Consensus 81 g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~ 160 (341)
T 1f2d_A 81 TRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKPYP 160 (341)
T ss_dssp HHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCCCEEEEeCCccchhHHHHHHHHHHHHHhcCCcEEE
Confidence 999999999999999999999887 33 999999999999999975322 367778888888765344
Q ss_pred ecCC-CCCCchHHHHHhhHHHHHhhhhC---CCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCcccc
Q 025563 155 MFRQ-FENPANPKIHYETTGPEIWKDSG---GDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLN 225 (251)
Q Consensus 155 ~~~~-~~n~~~~~~g~~t~~~EI~~q~~---~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~ 225 (251)
+.++ |+|+.+++ ||.+++.||++|+. ..+|+||+|+|||||++|++.+|++.+|++||+||||++++++.
T Consensus 161 i~~~~~~np~~~~-G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~~~~~~~~ 234 (341)
T 1f2d_A 161 IPAGCSEHKYGGL-GFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTSEKT 234 (341)
T ss_dssp ECGGGTTSTTTTT-HHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEECSSCHHHH
T ss_pred eCCCcCCCCccHH-HHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEEecCchHHH
Confidence 4578 99999996 99999999999995 47999999999999999999999999999999999999998765
No 32
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=100.00 E-value=1.6e-43 Score=320.95 Aligned_cols=196 Identities=26% Similarity=0.348 Sum_probs=176.4
Q ss_pred cCCCcceecccccccCCceEEEEeCCCCC-CCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCC
Q 025563 24 IGNTPMVYLNNVVDGCVARIAAKLEMMEP-CCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGY 102 (251)
Q Consensus 24 ~~~TPl~~~~~l~~~~g~~i~~K~E~~~p-tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~ 102 (251)
+.+|||+++++|++. |.+||+|+|++|| |||||+|++.+++..+. +.+++|. +|+++|+||||+|+|++|+++|+
T Consensus 94 ~~~TPL~~l~~Ls~~-g~~IylK~E~lnp~tGS~K~R~a~~~i~~l~--~a~~~g~-~Iv~assGNhG~AlA~aaa~~Gl 169 (389)
T 1wkv_A 94 GKPTPLVRSRLQLPN-GVRVWLKLEWYNPFSLSVKDRPAVEIISRLS--RRVEKGS-LVADATSSNFGVALSAVARLYGY 169 (389)
T ss_dssp SCSCCEEECCCCCST-TEEEEEEEGGGSTTTSBTTHHHHHHHHHHHT--TTSCTTC-EEEEECCHHHHHHHHHHHHHTTC
T ss_pred CCCCCeEEccccccC-CCeEEEEEcCCCCCcCChHHHHHHHHHHHHH--HHHhcCC-EEEEECCcHHHHHHHHHHHHcCC
Confidence 468999999999876 8899999999999 99999999999998854 3334453 59999999999999999999999
Q ss_pred cEEEEecCCCcHHHHHHHHHcCCEEE-EeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhC
Q 025563 103 KLIIVMPSIASMERRIVLRALGAEVY-LADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSG 181 (251)
Q Consensus 103 ~~~ivvp~~~~~~~~~~~~~~Ga~v~-~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~ 181 (251)
+|+||||..++..++.+++.+||+|+ .++.. +++++.+.+++++++. +.+|++||+|+.++.+||.+++.||.+|+.
T Consensus 170 ~~~ivmp~~~~~~k~~~~~~~GAeVv~~v~~~-~~~da~~~a~~~~~~~-g~~~~~p~~N~~~~~~~~~t~g~Ei~~Q~~ 247 (389)
T 1wkv_A 170 RARVYLPGAAEEFGKLLPRLLGAQVIVDPEAP-STVHLLPRVMKDSKNE-GFVHVNQFYNDANFEAHMRGTAREIFVQSR 247 (389)
T ss_dssp EEEEEEETTSCHHHHHHHHHTTCEEEEETTCS-SSGGGHHHHHHHHHHH-CCEECCTTTCHHHHHHHHHTHHHHHHHHHH
T ss_pred eEEEEECCCCCHHHHHHHHHcCCEEEEEcCCC-CHHHHHHHHHHHHHcc-CcEecCcCCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 78732 6888999998887775 789999999999888899999999999984
Q ss_pred ---CCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCcccc
Q 025563 182 ---GDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLN 225 (251)
Q Consensus 182 ---~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~ 225 (251)
..||+||+|+|+||+++|++.+|++..|++||+||||.+++++.
T Consensus 248 ~~g~~~D~vv~~vG~GG~~~Gi~~~~k~~~p~vrvigVe~~~~~~l~ 294 (389)
T 1wkv_A 248 RGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIP 294 (389)
T ss_dssp HTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECTTCCCT
T ss_pred hcCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEecCCCCccc
Confidence 36999999999999999999999999999999999999987664
No 33
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=100.00 E-value=2.2e-43 Score=314.99 Aligned_cols=200 Identities=20% Similarity=0.175 Sum_probs=174.8
Q ss_pred HHHhhcccCCCcceecccccccC-C-ceEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEE--eccChH
Q 025563 17 KKDATQLIGNTPMVYLNNVVDGC-V-ARIAAKLEMME-P--CCSVKDRIALSMIKDAEEKGLITPGKSVLIE--TTGGNT 89 (251)
Q Consensus 17 ~~~v~~~~~~TPl~~~~~l~~~~-g-~~i~~K~E~~~-p--tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~--~ssGN~ 89 (251)
++++...+++|||+++++|++.+ | .+||+|+|++| | +||||+|++.+++.++.++|. . +||+ +|+|||
T Consensus 6 ~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~~~g~----~-~vv~~GassGN~ 80 (338)
T 1tzj_A 6 FPRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGC----D-TLVSIGGIQSNQ 80 (338)
T ss_dssp SCCCCCSSSSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHHHTTC----C-EEEEEEETTCHH
T ss_pred CCccccCCCCCccEEHHHHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC----C-EEEEcCCchhHH
Confidence 46788999999999999998887 7 89999999997 8 999999999999999998875 3 3887 799999
Q ss_pred HHHHHHHHHHCCCcEEEEecCCCcHH--------HHHHHHHcCCEEEEeCCCCChHH-----HHHHHHHHhhcCCCeEec
Q 025563 90 GIGLAFIAALRGYKLIIVMPSIASME--------RRIVLRALGAEVYLADQAGGFEG-----ILRKGEEILSNTPNGFMF 156 (251)
Q Consensus 90 g~alA~~a~~~G~~~~ivvp~~~~~~--------~~~~~~~~Ga~v~~v~~~~~~~~-----~~~~a~~~~~~~~~~~~~ 156 (251)
|+|+|++|+++|++|++|||++.+.. |+++++.+||+|+.+++. +++ +.+.+++++++.+..|++
T Consensus 81 g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~~~~~~a~~l~~~~~~~~~~ 158 (338)
T 1tzj_A 81 TRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDG--FDIGFRRSWEDALESVRAAGGKPYAI 158 (338)
T ss_dssp HHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC---------CHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCEEEEeCCc--chhhHHHHHHHHHHHHHhcCCceEEe
Confidence 99999999999999999999988764 999999999999999874 333 467778888876444543
Q ss_pred -CC-CCCCchHHHHHhhHHHHHhhhhC---CCCCEEEEecCchhHHHHHHHHHHhh-CCCcEEEEEeCCCCcccc
Q 025563 157 -RQ-FENPANPKIHYETTGPEIWKDSG---GDVDILVAGIGTGGTVTGSGRFLKEK-NPNIKVYGVEPTESAMLN 225 (251)
Q Consensus 157 -~~-~~n~~~~~~g~~t~~~EI~~q~~---~~~d~vv~~vGtGg~~~Gi~~~~~~~-~~~~~vigVep~~s~~~~ 225 (251)
++ ++|+.+++ ||.+++.||++|+. ..+|+||+|+|+||+++|++.++++. +|+ ||++|||++++.+.
T Consensus 159 p~~~~~n~~~~~-g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~~~~~~~~ 231 (338)
T 1tzj_A 159 PAGCSDHPLGGL-GFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDASAKPAQT 231 (338)
T ss_dssp CGGGTSSTTTTT-HHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEECSSCHHHH
T ss_pred CCCcCCCcccHH-HHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEccCchHHH
Confidence 56 89999996 99999999999985 47999999999999999999999998 888 99999999997764
No 34
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=1.5e-42 Score=317.87 Aligned_cols=217 Identities=22% Similarity=0.219 Sum_probs=180.1
Q ss_pred CccccccchhhHHHHHHHhh--------------cccC-CCcceecccccccC-CceEEEEeCCCCCCCchhhHHHHHHH
Q 025563 2 VLEASMEDNHHKRAIKKDAT--------------QLIG-NTPMVYLNNVVDGC-VARIAAKLEMMEPCCSVKDRIALSMI 65 (251)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~v~--------------~~~~-~TPl~~~~~l~~~~-g~~i~~K~E~~~ptGS~K~R~a~~~l 65 (251)
++|..|++++++..+++++. ..++ +|||+++++|++.+ |.+||+|+|++|||||||+|++.+++
T Consensus 38 ~p~~~~~~~~~i~~A~~~~~~~~~~~~~~~~~~~~~ig~~TPL~~~~~Ls~~~gg~~i~lK~E~l~ptGSfK~R~a~~~i 117 (418)
T 1x1q_A 38 VPETLIPALEELEAAYREAKKDPAFLEELDHYLRQFAGRPTPLYHAKRLSEYWGGAQVFLKREDLLHTGAHKINNTLGQA 117 (418)
T ss_dssp CCTTTHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSGGGBTTHHHHHHHH
T ss_pred CCchhhhhHHHHHHHHHHHhhChHHHHHHHHhhhcccCCCCCcEEhHHhHhhcCCceEEEEEccCCcCccHHHHHHHHHH
Confidence 35556777889999988887 4674 59999999998888 58999999999999999999999999
Q ss_pred HHHHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC---cHHHHHHHHHcCCEEEEeCC-CCChHHHHH
Q 025563 66 KDAEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA---SMERRIVLRALGAEVYLADQ-AGGFEGILR 141 (251)
Q Consensus 66 ~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~---~~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~ 141 (251)
..+.++|+ ...|+++|+||||+|+|++|+++|++|+||||... +..|+.+++.+||+|+.++. ..+++++.+
T Consensus 118 ~~a~~~g~----~~vI~~~ssGNhg~avA~aaa~~Gi~~~I~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~~~~a~~ 193 (418)
T 1x1q_A 118 LLARRMGK----RRVIAETGAGQHGVSVATVAALFGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATN 193 (418)
T ss_dssp HHHHHHTC----CEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEHHHHHTCHHHHHHHHHTTCEEEEECSTTSSHHHHHH
T ss_pred HHHHHcCC----CEEEEecCchHHHHHHHHHHHHcCCCEEEEECCCcchhhhHHHHHHHHCCCEEEEECCCCCCHHHHHH
Confidence 98887775 33356799999999999999999999999999752 23678899999999999984 347889888
Q ss_pred HHHH-HhhcCCCeEe-cCCCCCCc----hHHHHHhhHHHHHhhhhC----CCCCEEEEecCchhHHHHHHHHHHhh-CCC
Q 025563 142 KGEE-ILSNTPNGFM-FRQFENPA----NPKIHYETTGPEIWKDSG----GDVDILVAGIGTGGTVTGSGRFLKEK-NPN 210 (251)
Q Consensus 142 ~a~~-~~~~~~~~~~-~~~~~n~~----~~~~g~~t~~~EI~~q~~----~~~d~vv~~vGtGg~~~Gi~~~~~~~-~~~ 210 (251)
.+.+ ++++.++.+| ++++.|+. ++..||.|++.||.+|+. ..||+||+|+|+||+++|++.+|++. .|+
T Consensus 194 ~a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq~t~~~Ei~~Ql~~~~~~~~D~vvvpvGgGG~~~Gi~~~~k~l~~p~ 273 (418)
T 1x1q_A 194 EAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQSVIGEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFAPFAYLPEGR 273 (418)
T ss_dssp HHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHHTHHHHHHHHHHHHHHSSCCSEEEEECSSSSHHHHHHHHHHTSCTTC
T ss_pred HHHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCC
Confidence 7754 5666545555 45554443 233499999999999983 45999999999999999999999987 789
Q ss_pred cEEEEEeCCCCc
Q 025563 211 IKVYGVEPTESA 222 (251)
Q Consensus 211 ~~vigVep~~s~ 222 (251)
+||+||||++++
T Consensus 274 ~~vigVe~~g~~ 285 (418)
T 1x1q_A 274 PKLIGVEAAGEG 285 (418)
T ss_dssp CEEEEEEECCTT
T ss_pred CeEEEEecCCcc
Confidence 999999999974
No 35
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=100.00 E-value=2.5e-42 Score=314.55 Aligned_cols=216 Identities=19% Similarity=0.195 Sum_probs=179.5
Q ss_pred CccccccchhhHHHHHHHhh--------------cccC-CCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHHHH
Q 025563 2 VLEASMEDNHHKRAIKKDAT--------------QLIG-NTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMIK 66 (251)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~v~--------------~~~~-~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l~ 66 (251)
++|..|++++++..+++++. ..++ +|||+++++|++.+|.+||+|+|++|||||||+|++.+++.
T Consensus 16 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ig~~TPL~~~~~l~~~~g~~i~lK~E~l~ptGSfK~R~a~~~~~ 95 (396)
T 1qop_B 16 VPQILMPALNQLEEAFVSAQKDPEFQAQFADLLKNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQAL 95 (396)
T ss_dssp SCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCSCCEEECHHHHTTSSEEEEEEEGGGSTTSBTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhCCCCCCcEEhhhhhhccCCeEEEEeccCCCCCcHHHHHHHHHHH
Confidence 45666788888888888876 3676 49999999999989999999999999999999999999999
Q ss_pred HHHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC-CcH--HHHHHHHHcCCEEEEeCC-CCChHHHHHH
Q 025563 67 DAEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI-ASM--ERRIVLRALGAEVYLADQ-AGGFEGILRK 142 (251)
Q Consensus 67 ~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~-~~~--~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~ 142 (251)
.+.++|+ ...++++|+||||+|+|++|+++|++|+||||.. .+. .|+.+++.+||+|+.++. ..+++++.+.
T Consensus 96 ~a~~~g~----~~vi~e~ssGNhg~a~A~aa~~~G~~~~i~mp~~~~~~~~~~~~~~~~~GA~V~~v~~~~~~~~~a~~~ 171 (396)
T 1qop_B 96 LAKRMGK----SEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNE 171 (396)
T ss_dssp HHHHTTC----CEEEEEESSSHHHHHHHHHHHHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECSTTSSHHHHHHH
T ss_pred HHHHcCc----CEEEEecCchHHHHHHHHHHHHCCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHH
Confidence 9888875 3324448999999999999999999999999985 433 457899999999999984 4478888888
Q ss_pred HHHH-hhcCCCeEe-cCCCCCCc----hHHHHHhhHHHHHhhhh----CCCCCEEEEecCchhHHHHHHHHHHhhCCCcE
Q 025563 143 GEEI-LSNTPNGFM-FRQFENPA----NPKIHYETTGPEIWKDS----GGDVDILVAGIGTGGTVTGSGRFLKEKNPNIK 212 (251)
Q Consensus 143 a~~~-~~~~~~~~~-~~~~~n~~----~~~~g~~t~~~EI~~q~----~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~ 212 (251)
+.+. +++.++.+| ++++.|+. ++..||.+++.||.+|+ +..||+||+|+|+||+++|++.+++ ..|++|
T Consensus 172 a~~~~~~~~~~~~~~~~~~~n~~p~~~~v~~g~~t~~~Ei~~Ql~~~~~~~~d~vvvpvG~GG~~~Gi~~~~~-~~~~~~ 250 (396)
T 1qop_B 172 ALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFI-NDTSVG 250 (396)
T ss_dssp HHHHHHHHTTTEEECCCSSCSSTTHHHHHHHTTTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT-TCTTSE
T ss_pred HHHHHHhccCCcEEEeCCcCCCCCchHHHHHHHhHHHHHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHHh-cCCCCE
Confidence 8754 665546555 45554443 33348999999999998 4579999999999999999999998 488999
Q ss_pred EEEEeCCCCc
Q 025563 213 VYGVEPTESA 222 (251)
Q Consensus 213 vigVep~~s~ 222 (251)
|+||||+++.
T Consensus 251 vigVe~~~~~ 260 (396)
T 1qop_B 251 LIGVEPGGHG 260 (396)
T ss_dssp EEEEEEEETB
T ss_pred EEEEeCCCcc
Confidence 9999999874
No 36
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=100.00 E-value=1.1e-41 Score=309.41 Aligned_cols=214 Identities=21% Similarity=0.219 Sum_probs=175.3
Q ss_pred cccccchhhHHHHHHHhhc--------------ccCC-CcceecccccccCC-ceEEEEeCCCCCCCchhhHHHHHHHHH
Q 025563 4 EASMEDNHHKRAIKKDATQ--------------LIGN-TPMVYLNNVVDGCV-ARIAAKLEMMEPCCSVKDRIALSMIKD 67 (251)
Q Consensus 4 ~~~~~~~~~~~~~~~~v~~--------------~~~~-TPl~~~~~l~~~~g-~~i~~K~E~~~ptGS~K~R~a~~~l~~ 67 (251)
+.-|.+++++..++.++.. .+++ |||+++++|++.+| ++||+|+|++||+||||+|++.+++..
T Consensus 13 ~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~~~ig~~TPL~~~~~l~~~~g~~~i~~K~E~~~ptGSfK~R~a~~~i~~ 92 (388)
T 1v8z_A 13 ETLIEPLKELEKAYKRFKDDEEFNRQLNYYLKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALL 92 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSBTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHhcCCCCCceehHhhHhhcCCceEEEEeccCCCCCCHHHHHHHHHHHH
Confidence 3334456677777777664 7865 99999999988886 899999999999999999999999998
Q ss_pred HHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC-Cc--HHHHHHHHHcCCEEEEeCC-CCChHHHHHHH
Q 025563 68 AEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI-AS--MERRIVLRALGAEVYLADQ-AGGFEGILRKG 143 (251)
Q Consensus 68 a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~-~~--~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a 143 (251)
+.++|. ...|+++|+||||+|+|++|+++|++|+||||.. .+ +.|+++++.+||+|+.++. ..+++++.+.+
T Consensus 93 a~~~g~----~~vv~~~ssGN~g~a~A~aa~~~G~~~~iv~p~~~~~~~~~~~~~~~~~GA~V~~~~~~~~~~~~a~~~a 168 (388)
T 1v8z_A 93 AKFMGK----TRLIAETGAGQHGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEA 168 (388)
T ss_dssp HHHTTC----CEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHH
T ss_pred HHHcCC----CEEEEecCchHHHHHHHHHHHHcCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHH
Confidence 887775 3334469999999999999999999999999974 22 4568999999999999985 34688888887
Q ss_pred HH-HhhcCCCeEe-cCCCCCCch----HHHHHhhHHHHHhhhh----CCCCCEEEEecCchhHHHHHHHHHHhhCCCcEE
Q 025563 144 EE-ILSNTPNGFM-FRQFENPAN----PKIHYETTGPEIWKDS----GGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKV 213 (251)
Q Consensus 144 ~~-~~~~~~~~~~-~~~~~n~~~----~~~g~~t~~~EI~~q~----~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~v 213 (251)
.+ ++++.++.+| ++++.|+.+ +..||.|++.||++|+ ...+|+||+|+|+||+++|++.+++. .|++||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~n~~p~~~~~~~~~~t~~~Ei~~q~~~~~~~~~d~vvvpvG~GG~~aGi~~~~~~-~~~~~v 247 (388)
T 1v8z_A 169 LRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFVN-DKKVKL 247 (388)
T ss_dssp HHHHHHHTTTEEECCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTT-CTTSEE
T ss_pred HHHHHHhCCCceEecCCccCCCCchhHHHHHhHHHHHHHHHHHHHhcCCCCCEEEEecCccHhHHHHHHHHhh-CCCceE
Confidence 54 5666545554 567666543 3348999999999998 44699999999999999999998884 889999
Q ss_pred EEEeCCCCc
Q 025563 214 YGVEPTESA 222 (251)
Q Consensus 214 igVep~~s~ 222 (251)
+||||+++.
T Consensus 248 igve~~~~~ 256 (388)
T 1v8z_A 248 VGVEAGGKG 256 (388)
T ss_dssp EEEEEEETB
T ss_pred EEEccCccc
Confidence 999999874
No 37
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=100.00 E-value=1.2e-40 Score=305.50 Aligned_cols=215 Identities=24% Similarity=0.262 Sum_probs=175.4
Q ss_pred CccccccchhhHHHHHHHhh--------------cccC-CCcceecccccccC-CceEEEEeCCCCCCCchhhHHHHHHH
Q 025563 2 VLEASMEDNHHKRAIKKDAT--------------QLIG-NTPMVYLNNVVDGC-VARIAAKLEMMEPCCSVKDRIALSMI 65 (251)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~v~--------------~~~~-~TPl~~~~~l~~~~-g~~i~~K~E~~~ptGS~K~R~a~~~l 65 (251)
++|..|+.++++..+++++. ..++ +|||+++++|++.+ +.+||+|+|++|||||||+|++.+++
T Consensus 42 ~pe~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~g~~TPL~~~~~Ls~~~gg~~i~lK~E~lnptGSfK~R~a~~~~ 121 (422)
T 2o2e_A 42 VPEALMAVIEEVTAAYQKERVSQDFLDDLDRLQANYAGRPSPLYEATRLSQHAGSARIFLKREDLNHTGSHKINNVLGQA 121 (422)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTSTHHHHHHHHHTTTTSSCSCCEEECGGGGGGTTTCEEEEECGGGCCSSTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhCCCCCCeEEChhhHhhcCCCeEEEEEcCCCCCCcHHHHHHHHHH
Confidence 34555677888888888874 3564 59999999999988 47999999999999999999999999
Q ss_pred HHHHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc---HHHHHHHHHcCCEEEEeCC-CCChHHHHH
Q 025563 66 KDAEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS---MERRIVLRALGAEVYLADQ-AGGFEGILR 141 (251)
Q Consensus 66 ~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~---~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~ 141 (251)
..+.+.|+ ...|+++|+||||+|+|++|+++|++|+||||.... ..|+.+++.+||+|+.++. ..+++++.+
T Consensus 122 ~~a~~~g~----~~vI~~~ssGNhG~A~A~aaa~~G~~~~I~mp~~~~~~q~~kv~~~~~~GA~Vv~v~~~~~~~~da~~ 197 (422)
T 2o2e_A 122 LLARRMGK----TRVIAETGAGQHGVATATACALLGLDCVIYMGGIDTARQALNVARMRLLGAEVVAVQTGSKTLKDAIN 197 (422)
T ss_dssp HHHHHTTC----CEEEEEESSSHHHHHHHHHHHHHTCEEEEEEEHHHHHHSHHHHHHHHHTTCEEEEECSTTSCHHHHHH
T ss_pred HHHHHcCC----CeEEEecCccHHHHHHHHHHHHcCCcEEEEeCCCcchhhHHHHHHHHHCCCEEEEECCCCCCHHHHHH
Confidence 98888775 333667999999999999999999999999998532 4678899999999999985 347889988
Q ss_pred HHHH-HhhcCCCeEe-cCCCCCCc----hHHHHHhhHHHHHhhhh----CCCCCEEEEecCchhHHHHHHHHHHhhCCCc
Q 025563 142 KGEE-ILSNTPNGFM-FRQFENPA----NPKIHYETTGPEIWKDS----GGDVDILVAGIGTGGTVTGSGRFLKEKNPNI 211 (251)
Q Consensus 142 ~a~~-~~~~~~~~~~-~~~~~n~~----~~~~g~~t~~~EI~~q~----~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~ 211 (251)
.+.+ ++++.++.+| ++++.|+. ++..||.+++.||.+|+ +..||+||+|+|+||+++|++.+++. .|++
T Consensus 198 ~a~~~~~~~~~~~~yi~~s~~g~~p~~~~v~~~q~t~g~Ei~~Ql~~~~~~~pD~vvvpvG~GG~~~Gi~~~~~~-~p~v 276 (422)
T 2o2e_A 198 EAFRDWVANADNTYYCFGTAAGPHPFPTMVRDFQRIIGMEARVQIQGQAGRLPDAVVACVGGGSNAIGIFHAFLD-DPGV 276 (422)
T ss_dssp HHHHHHHHHTTTEEECCCCSSSCCCCHHHHHHHTTHHHHHHHHHHHHHSSSCCSEEEEEGGGHHHHHTTSGGGTT-CTTC
T ss_pred HHHHHHHhcCCCcEEEeCCccCCCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEccCCchhHHHHHHHHhc-CCCC
Confidence 7754 5666446555 44544332 34448999999999997 34599999999999999999888864 7889
Q ss_pred EEEEEeCCCC
Q 025563 212 KVYGVEPTES 221 (251)
Q Consensus 212 ~vigVep~~s 221 (251)
||+||||+++
T Consensus 277 ~vigVe~~g~ 286 (422)
T 2o2e_A 277 RLVGFEAAGD 286 (422)
T ss_dssp EEEEEEECC-
T ss_pred eEEEEecCCC
Confidence 9999999987
No 38
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=100.00 E-value=1.6e-40 Score=309.22 Aligned_cols=213 Identities=16% Similarity=0.107 Sum_probs=177.1
Q ss_pred hhcccCCCcceeccccccc-CCc-eEEEEeCCCCCCCchhhHHHHHHHHHHHH---cCCCCCCCeEEEEeccChHHHHHH
Q 025563 20 ATQLIGNTPMVYLNNVVDG-CVA-RIAAKLEMMEPCCSVKDRIALSMIKDAEE---KGLITPGKSVLIETTGGNTGIGLA 94 (251)
Q Consensus 20 v~~~~~~TPl~~~~~l~~~-~g~-~i~~K~E~~~ptGS~K~R~a~~~l~~a~~---~g~~~~g~~~vv~~ssGN~g~alA 94 (251)
+...+++|||+++++|++. +|. +||+|+|++|||||||||++.+++..+.+ ++. +..+||++|+||||.|+|
T Consensus 124 v~l~~g~TPLv~l~~L~~~~lg~~~l~~K~E~~nPTGSFKDRga~~~~~~l~~~~~~~~---g~~~Vv~aSsGNtG~AlA 200 (486)
T 1e5x_A 124 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKR---PVVGVGCASTGDTSAALS 200 (486)
T ss_dssp CCCCCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHHHHTTC---CCCEEEECCCSHHHHHHH
T ss_pred ccccCCCCCcEECcccchhhcCCCcEEEeeccCCCccCHHHHHHHHHHHHHHHHHHcCC---CCeEEEEcCCCHHHHHHH
Confidence 4556889999999999887 774 89999999999999999999888776543 331 233599999999999999
Q ss_pred HHHHHCCCcEEEEecCC-CcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHH
Q 025563 95 FIAALRGYKLIIVMPSI-ASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTG 173 (251)
Q Consensus 95 ~~a~~~G~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~ 173 (251)
++|+++|++|+||+|.+ ++..|+.+++.+||+|+.+++ +|+++.+.+++++++. +.++++++ |+.+++ ||.+++
T Consensus 201 ~~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~GA~vi~v~g--~~dd~~~~a~~l~~~~-~~~~vns~-N~~~i~-gq~t~~ 275 (486)
T 1e5x_A 201 AYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDT--DFDGCMKLIREITAEL-PIYLANSL-NSLRLE-GQKTAA 275 (486)
T ss_dssp HHHHHHTCCEEEEEEGGGCCHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHHS-CEEEGGGS-HHHHHH-HHTHHH
T ss_pred HHHHHcCCeEEEEECCCCCCHHHHHHHHhCCCEEEEECC--CHHHHHHHHHHHHhcC-CEEEeCCC-CHHHHH-HHHHHH
Confidence 99999999999999996 999999999999999999997 5999999999998886 78889887 899996 999999
Q ss_pred HHHhhhhCC-CCCEEEEecCchhHHHHHHHHHHhhC------CCcEEEEEeCCCCccccC----CC----C---Cceeec
Q 025563 174 PEIWKDSGG-DVDILVAGIGTGGTVTGSGRFLKEKN------PNIKVYGVEPTESAMLNG----GQ----P---GRLLFF 235 (251)
Q Consensus 174 ~EI~~q~~~-~~d~vv~~vGtGg~~~Gi~~~~~~~~------~~~~vigVep~~s~~~~~----~~----~---~~~~i~ 235 (251)
+||++|+++ .+|+||+|+|+||+++|++.+|++.. |.+||++|||++++++.. |. + .++..+
T Consensus 276 ~Ei~~ql~~~~~D~vvvpvG~GG~i~Gi~~a~k~~~~~Gli~p~~rvi~Ve~~~~~~l~~~~~~G~~~~~~~~~~~t~a~ 355 (486)
T 1e5x_A 276 IEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKXCQELGLVDRIPRMVCAQAANANPLYLHYKSGWKDFKPMTASTTFAS 355 (486)
T ss_dssp HHHHHHTTSCCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEETTSSTHHHHHHTTTTTCCC---------
T ss_pred HHHHHHcCCCCCCEEEEeCCcHHHHHHHHHHHHHhhhhccCCCCCEEEEEecCCCchHHHHHHcCCCccccCCCCCeeCc
Confidence 999999964 59999999999999999999999864 789999999999887642 31 1 356777
Q ss_pred ccCCc
Q 025563 236 LFFLF 240 (251)
Q Consensus 236 g~g~~ 240 (251)
||+.+
T Consensus 356 gi~i~ 360 (486)
T 1e5x_A 356 AIQIG 360 (486)
T ss_dssp -----
T ss_pred cccCC
Confidence 88766
No 39
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=100.00 E-value=1.4e-33 Score=258.93 Aligned_cols=181 Identities=15% Similarity=0.112 Sum_probs=152.7
Q ss_pred CCCcceecccccccCCceEEEEeCCC-CCCCchhhHHHHHHHHHHH--HcCCCCCCCeEEEEeccChHHHHHH-HHHHHC
Q 025563 25 GNTPMVYLNNVVDGCVARIAAKLEMM-EPCCSVKDRIALSMIKDAE--EKGLITPGKSVLIETTGGNTGIGLA-FIAALR 100 (251)
Q Consensus 25 ~~TPl~~~~~l~~~~g~~i~~K~E~~-~ptGS~K~R~a~~~l~~a~--~~g~~~~g~~~vv~~ssGN~g~alA-~~a~~~ 100 (251)
++|||+++++ +||+ +|++ |||||||||++.++++... .++ +..+|+++|+||||.|+| .+|+++
T Consensus 82 ~~TPL~~l~~-------~i~~-~E~~~~pTgSfKdr~a~~l~~~l~~a~~~----~~~~Iv~atsGNtG~A~A~~~a~~~ 149 (428)
T 1vb3_A 82 FPAPVANVES-------DVGC-LELFHGPTLAFKDFGGRFMAQMLTHIAGD----KPVTILTATSGDTGAAVAHAFYGLP 149 (428)
T ss_dssp SCCCEEEEET-------TEEE-EECCCSTTSBTHHHHHHHHHHHHHHHTTT----CCEEEEEECSSSHHHHHHHHTTTCT
T ss_pred CCCCeEEecC-------CeEE-eeccCCCcccHHHHHHHHHHHHHHHHHhc----CCCEEEecCCchHHHHHHHHHhhhc
Confidence 7899999874 6999 7777 6999999999998853322 222 244599999999999999 599999
Q ss_pred CCcEEEEecC-CCcHHHHHHHHHcCCEE--EEeCCCCChHHHHHHHHHHhhc-----CCCeEecCCCCCCchHHHHHhhH
Q 025563 101 GYKLIIVMPS-IASMERRIVLRALGAEV--YLADQAGGFEGILRKGEEILSN-----TPNGFMFRQFENPANPKIHYETT 172 (251)
Q Consensus 101 G~~~~ivvp~-~~~~~~~~~~~~~Ga~v--~~v~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~n~~~~~~g~~t~ 172 (251)
|++|+||||+ +++..++++|+.+||+| +.+++ +++++.+.++++.++ ..+.++++++ |+.+++ ||.++
T Consensus 150 G~~~~I~~P~~~~s~~k~~~m~~~GA~V~~v~v~g--~~d~~~~~~~~~~~d~~~~~~~~~~~~n~~-n~~~~~-gq~t~ 225 (428)
T 1vb3_A 150 NVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDG--DFDACQALVKQAFDDEELKVALGLNSANSI-NISRLL-AQICY 225 (428)
T ss_dssp TEEEEEEEETTCSCHHHHHHHHSCCTTEEEEEEES--CHHHHHHHHHHGGGCHHHHHHHTEECCSTT-SHHHHH-HTTHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHhcCCeEEEEEeCC--CHHHHHHHHHHHHhchhhhhhcCeeeCCCC-CHHHHH-HHHHH
Confidence 9999999999 59999999999999999 66665 689999988888753 1256677764 788875 99999
Q ss_pred HHHHhhhhCC---CCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCC
Q 025563 173 GPEIWKDSGG---DVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTES 221 (251)
Q Consensus 173 ~~EI~~q~~~---~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s 221 (251)
+.||++|+.. .+|+||+|+|+||+++|++.+++...|.+|||+|++.+.
T Consensus 226 ~~Ei~~ql~~~g~~~d~vvvpvG~GG~i~G~~~a~~~g~p~~kii~a~~~~~ 277 (428)
T 1vb3_A 226 YFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVND 277 (428)
T ss_dssp HHHHHTTSCTTTTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEECSCC
T ss_pred HHHHHHHcccccCCCCEEEEeCCchHHHHHHHHHHHcCCCCCeEEeecCCCh
Confidence 9999999964 599999999999999999999987778889999998863
No 40
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=99.97 E-value=3e-31 Score=247.48 Aligned_cols=191 Identities=14% Similarity=0.027 Sum_probs=150.7
Q ss_pred ccCCCccee--cccccccCCceEEEEeCCCCCCCchhhHHHHHHH---HHHH-HcCC-----CCCCCeEEEEeccChHHH
Q 025563 23 LIGNTPMVY--LNNVVDGCVARIAAKLEMMEPCCSVKDRIALSMI---KDAE-EKGL-----ITPGKSVLIETTGGNTGI 91 (251)
Q Consensus 23 ~~~~TPl~~--~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~l---~~a~-~~g~-----~~~g~~~vv~~ssGN~g~ 91 (251)
..+.|||++ ++++ .+||+|.|++|||||||||++.+++ .+++ ++|. ++++ .+||++||||||.
T Consensus 93 ~~g~TPLv~~~l~~l-----~~l~~K~e~~nPTgSFKDrga~~~~~~~~~a~~~~g~~~~~~~~~~-~~Iv~ATSGNtG~ 166 (514)
T 1kl7_A 93 SDEVTPLVQNVTGDK-----ENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQ-ITVVGATSGDTGS 166 (514)
T ss_dssp STTSSCEECCTTCSS-----SCEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCC-EEEEEECSSSHHH
T ss_pred CCCCCceeehhcccc-----cchhhhhhccCCCCcHHHHHHHHHHHHHHHHHHhcCCccccccCCC-CEEEECCCCcHHH
Confidence 467899999 7665 4799999999999999999999984 4443 3452 3333 4599999999999
Q ss_pred HHHHHH--HHCCCcEEEEecCC-CcHHHHHHH---HHcCCEEEEeCCCCChHHHHHHHHHHhhcCC-----CeEecCCCC
Q 025563 92 GLAFIA--ALRGYKLIIVMPSI-ASMERRIVL---RALGAEVYLADQAGGFEGILRKGEEILSNTP-----NGFMFRQFE 160 (251)
Q Consensus 92 alA~~a--~~~G~~~~ivvp~~-~~~~~~~~~---~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~ 160 (251)
| |++| ++.|++++||+|++ +++.++.++ ..+|++++.+++ +|+++.+.+++++++.+ +.++.++.
T Consensus 167 A-A~~a~a~~~Gi~~~I~~P~~~~S~~q~~qm~~~~g~~~~vv~v~g--~fdda~~~vk~l~~~~~~~~~~~~~~~Ns~- 242 (514)
T 1kl7_A 167 A-AIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVTG--TFDNCQDIVKAIFGDKEFNSKHNVGAVNSI- 242 (514)
T ss_dssp H-HHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEESS--CHHHHHHHHHHHHHCSSCC--CCBCCCCSC-
T ss_pred H-HHHHHHhhcCCeEEEEEcCCCCCHHHHHHHhhhcCCCEEEEEcCC--CHHHHHHHHHHHHhcccccccceeEeeCCC-
Confidence 9 6666 88999999999997 888777777 345667777776 69999999999987742 23344443
Q ss_pred CCchHHHHHhhHHHHHhhhh-C---CCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCcccc
Q 025563 161 NPANPKIHYETTGPEIWKDS-G---GDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLN 225 (251)
Q Consensus 161 n~~~~~~g~~t~~~EI~~q~-~---~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~ 225 (251)
|+..++ |+.+.+.|+.+|+ + +.+|+||+|+|+||++.|++.+.+.-.|.+|+++|||++ +++.
T Consensus 243 N~~ri~-gQ~tyy~e~~~ql~~~~~~~~d~~vvP~GngG~i~a~~~ak~~G~p~~rli~v~~~n-~~l~ 309 (514)
T 1kl7_A 243 NWARIL-AQMTYYFYSFFQATNGKDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLAIATNEN-DILD 309 (514)
T ss_dssp CHHHHH-HHHHHHHHHHHHHHSSSSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCEEEEECSC-CHHH
T ss_pred CHhHHh-hHHHHHHHHHHHHhhhcCCCCcEEEEECCchHHHHHHHHHHHcCCCCCEEEEEeCCc-chHH
Confidence 666664 9999999999998 4 358999999999999999886544435778999999999 4544
No 41
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=99.97 E-value=9.4e-31 Score=241.53 Aligned_cols=183 Identities=13% Similarity=0.100 Sum_probs=151.6
Q ss_pred CCcceecccccccCCceEEEEeCCCCCCCchhhHHHHHH---HHHHH-HcCCCCCCCeEEEEeccChHHH-HHHHHHHHC
Q 025563 26 NTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSM---IKDAE-EKGLITPGKSVLIETTGGNTGI-GLAFIAALR 100 (251)
Q Consensus 26 ~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~---l~~a~-~~g~~~~g~~~vv~~ssGN~g~-alA~~a~~~ 100 (251)
-|||+++.. ++|+|.|++|||||||||++.++ +..+. ++|. ..+|+++|+||||. +++.+|++.
T Consensus 93 ~~pl~~l~~-------~~~~kee~~~PTgSFKDRga~~~~~~l~~a~~~~g~----~~~Vv~ASSGNtG~aa~aa~a~~~ 161 (468)
T 4f4f_A 93 VCPLVQTDA-------NEFVLELFHGPTLAFKDVAMQLLARMMDYVLAQRGE----RATIVGATSGDTGGAAIEAFGGRD 161 (468)
T ss_dssp SSCEEEEET-------TEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHTTC----CEEEEEECSSHHHHHHHHHHTTCS
T ss_pred CCceEEecC-------CeehHHhccCCcccHHHHHHHHHHHHHHHHHHhcCC----CcEEEEECCchHHHHHHHHHHhcc
Confidence 389988742 69999999999999999999999 66664 4553 33599999999994 557778999
Q ss_pred CCcEEEEecCC-CcHHHHHHHHHcC-CEE--EEeCCCCChHHHHHHHHHHhhcCC-----CeEecCCCCCCchHHHHHhh
Q 025563 101 GYKLIIVMPSI-ASMERRIVLRALG-AEV--YLADQAGGFEGILRKGEEILSNTP-----NGFMFRQFENPANPKIHYET 171 (251)
Q Consensus 101 G~~~~ivvp~~-~~~~~~~~~~~~G-a~v--~~v~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~n~~~~~~g~~t 171 (251)
|++++||||++ +++.|+.+++.+| ++| +.+++ +|+++.+.+++++++.+ +.++++. .|+..+ .||.|
T Consensus 162 Gi~~~I~~P~~~~s~~k~~~~~~~gganV~vv~v~g--~fdda~~~~k~~~~d~~~~~~~~~~~vns-in~~ri-~GQ~T 237 (468)
T 4f4f_A 162 NTDIFILFPNGRVSPVQQRQMTSSGFSNVHALSIEG--NFDDCQNLVKGMFNDLEFCDALSLSGVNS-INWARI-MPQVV 237 (468)
T ss_dssp SEEEEEEEETTCSCHHHHHHHHCSCCTTEEEEEEES--CHHHHHHHHHHHHHCHHHHHHHTEEECCT-TSHHHH-GGGHH
T ss_pred CCcEEEEeCCCCCCHHHHHHHHhcCCCeEEEeecCC--CHHHHHHHHHHHHhccccccccceEeCCC-CCHHHH-HhHHH
Confidence 99999999998 9999999999997 455 66666 69999999998877641 4566766 588888 49999
Q ss_pred HHHHHhhhhCCCCCE---EEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCcccc
Q 025563 172 TGPEIWKDSGGDVDI---LVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLN 225 (251)
Q Consensus 172 ~~~EI~~q~~~~~d~---vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~ 225 (251)
++.||++|+. .+|. |+||+|+||+++|++.+.+.-.|..|+++| +.+++++.
T Consensus 238 ~~~Ei~~ql~-~~d~~v~vvVPvG~GG~i~g~~~Ak~mGlPi~kli~a-~n~~~~l~ 292 (468)
T 4f4f_A 238 YYFTAALSLG-APDRAVSFTVPTGNFGDIFAGYVAKRMGLPIEQLIIA-TNDNDILS 292 (468)
T ss_dssp HHHHHHHHTT-TTSSCEEEEEECSSSHHHHHHHHHHHHTCCEEEEEEE-ECSCCHHH
T ss_pred HHHHHHHhcc-cCCCCeEEEEEeCCcHHHHHHHHHHHhCCCCCEEEEE-eCCchHHH
Confidence 9999999994 7898 999999999999999884433467799999 88888764
No 42
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=99.97 E-value=1.8e-29 Score=233.22 Aligned_cols=187 Identities=13% Similarity=0.049 Sum_probs=152.5
Q ss_pred CcceecccccccCCceEEEEeCCCCCCCchhhHHHHHH---HHHHHH-cCCCCCCCeEEEEeccChHHHHHHHHHH-HCC
Q 025563 27 TPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIALSM---IKDAEE-KGLITPGKSVLIETTGGNTGIGLAFIAA-LRG 101 (251)
Q Consensus 27 TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~---l~~a~~-~g~~~~g~~~vv~~ssGN~g~alA~~a~-~~G 101 (251)
|||+++..- .+.++|+|.|+.|||||||||++..+ +..+.+ +|. ..+|+++||||||.|.|++++ +.|
T Consensus 103 ~Pl~~l~~~---~~~~l~vkee~~~PTgSFKDRga~~~~~ll~~a~~~~g~----~~~Vv~ASSGNtG~Aaa~a~~~~~G 175 (487)
T 3v7n_A 103 TPLTTLGTE---NGAPVSLLELSNGPTLAFKDMAMQLLGNLFEYTLAKHGE----TLNILGATSGDTGSAAEYAMRGKEG 175 (487)
T ss_dssp SCEEEEEEE---TTEEEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHTTTC----CEEEEEECSSHHHHHHHHHHTTCTT
T ss_pred ceeEEecCC---CCcceeHHhhccCCcCcHHHHHHHHHHHHHHHHHHhcCC----CcEEEEeCChHHHHHHHHHHHhccC
Confidence 799887420 01249999999999999999999998 777754 443 334999999999999777776 899
Q ss_pred CcEEEEecCC-CcHHHHHHHHHcCC---EEEEeCCCCChHHHHHHHHHHhhcC-----CCeEecCCCCCCchHHHHHhhH
Q 025563 102 YKLIIVMPSI-ASMERRIVLRALGA---EVYLADQAGGFEGILRKGEEILSNT-----PNGFMFRQFENPANPKIHYETT 172 (251)
Q Consensus 102 ~~~~ivvp~~-~~~~~~~~~~~~Ga---~v~~v~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~n~~~~~~g~~t~ 172 (251)
++++||+|++ +++.|+++|+.+|+ +++.+++ ++++|.+.++++.++. -+..+++.+ |+.+++ |+.+.
T Consensus 176 i~~~I~~P~~~~s~~k~~qm~~~Ga~nv~vv~v~G--~fDda~~~vk~~~~d~~~~~~~~l~~vns~-Np~ri~-gQ~ty 251 (487)
T 3v7n_A 176 VRVFMLSPHKKMSAFQTAQMYSLQDPNIFNLAVNG--VFDDCQDIVKAVSNDHAFKAQQKIGTVNSI-NWARVV-AQVVY 251 (487)
T ss_dssp EEEEEEEETTCSCHHHHHHHHTCCCTTEEEEEEES--CHHHHHHHHHHHHTCHHHHHHTTEECCSTT-CHHHHH-HHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHhcCCCcEEEEEECC--CHHHHHHHHHHhhhchHHHhhcCeeeeCCC-CHHHHH-hHHHH
Confidence 9999999997 99999999999998 7888877 6999999998887631 156777765 788885 99988
Q ss_pred HHHHhhhhC---CCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCcccc
Q 025563 173 GPEIWKDSG---GDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESAMLN 225 (251)
Q Consensus 173 ~~EI~~q~~---~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~~~~ 225 (251)
++|+..|+. +.+|+|++|+|+||+++|++.+.+.-.|.+|+|+|++++ +++.
T Consensus 252 y~~~~~el~~~~~~~d~vvVP~GngG~i~g~~~A~~mGlp~~rli~a~~~n-~~l~ 306 (487)
T 3v7n_A 252 YFKGYFAATRSNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNEN-DVLD 306 (487)
T ss_dssp HHHHHHHTCSSTTCCEEEEEGGGCHHHHHHHHHHHHTTCCEEEEEEECTTC-HHHH
T ss_pred HHHHHHHHHhcCCCCcEEEEecCchHHHHHHHHHHHcCCCCceEEEEeCCC-cHHH
Confidence 888888873 359999999999999999987755444777999999998 5543
No 43
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.15 E-value=0.44 Score=35.60 Aligned_cols=49 Identities=20% Similarity=0.154 Sum_probs=39.5
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
++..+.|..|..+|...+..|.+++++-. .+.+++.++..|.+++.-+.
T Consensus 10 viIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~~~~~g~~~i~gd~ 58 (140)
T 3fwz_A 10 ALLVGYGRVGSLLGEKLLASDIPLVVIET---SRTRVDELRERGVRAVLGNA 58 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEESCT
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHHHcCCCEEECCC
Confidence 77778899999999999999999888743 45677777778888766554
No 44
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=93.42 E-value=0.75 Score=36.87 Aligned_cols=77 Identities=19% Similarity=0.295 Sum_probs=58.4
Q ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEe-------cC--CCcHHHHHHHH
Q 025563 51 EPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVM-------PS--IASMERRIVLR 121 (251)
Q Consensus 51 ~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivv-------p~--~~~~~~~~~~~ 121 (251)
+|.--+=+..+...+..|.+.|. +..||.+++|.++..++-.. .|++.++|. |. ..+++..+.++
T Consensus 22 ~~G~eNT~~tl~la~era~e~~I----k~iVVAS~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 95 (201)
T 1vp8_A 22 KPGRENTEETLRLAVERAKELGI----KHLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELR 95 (201)
T ss_dssp SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 44556667788888888988885 34466666799987766643 688988887 32 35789999999
Q ss_pred HcCCEEEEeCCC
Q 025563 122 ALGAEVYLADQA 133 (251)
Q Consensus 122 ~~Ga~v~~v~~~ 133 (251)
..|.+|+.-...
T Consensus 96 ~~G~~V~t~tH~ 107 (201)
T 1vp8_A 96 KRGAKIVRQSHI 107 (201)
T ss_dssp HTTCEEEECCCT
T ss_pred hCCCEEEEEecc
Confidence 999999998753
No 45
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.62 E-value=1.3 Score=38.09 Aligned_cols=65 Identities=18% Similarity=0.125 Sum_probs=49.6
Q ss_pred HHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCC
Q 025563 68 AEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGG 135 (251)
Q Consensus 68 a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~ 135 (251)
+.......+|++ |+...+|.-|...+..++.+|.+.++.+. .++.|++.++.+||+.+.-....+
T Consensus 152 ~~~~~~~~~g~~-VlV~GaG~vG~~aiq~ak~~G~~~vi~~~--~~~~k~~~a~~lGa~~~i~~~~~~ 216 (346)
T 4a2c_A 152 AFHLAQGCENKN-VIIIGAGTIGLLAIQCAVALGAKSVTAID--ISSEKLALAKSFGAMQTFNSSEMS 216 (346)
T ss_dssp HHHHTTCCTTSE-EEEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCSEEEETTTSC
T ss_pred HHHHhccCCCCE-EEEECCCCcchHHHHHHHHcCCcEEEEEe--chHHHHHHHHHcCCeEEEeCCCCC
Confidence 345556677888 55556788999999999999999888774 457889999999998777655433
No 46
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.13 E-value=1.7 Score=37.25 Aligned_cols=62 Identities=24% Similarity=0.217 Sum_probs=46.4
Q ss_pred HHHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 67 DAEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 67 ~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
.+++...+++|++.+| .++|..|.+.+..|+.+|.+++++. .++.+++.++.+|++.+.-..
T Consensus 157 ~~l~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~i~~~ 218 (340)
T 3s2e_A 157 KGLKVTDTRPGQWVVI-SGIGGLGHVAVQYARAMGLRVAAVD---IDDAKLNLARRLGAEVAVNAR 218 (340)
T ss_dssp HHHHTTTCCTTSEEEE-ECCSTTHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHTTCSEEEETT
T ss_pred HHHHHcCCCCCCEEEE-ECCCHHHHHHHHHHHHCCCeEEEEe---CCHHHHHHHHHcCCCEEEeCC
Confidence 3455666778888555 5568899999999999999765543 356888899999998765543
No 47
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.09 E-value=1.1 Score=38.24 Aligned_cols=59 Identities=27% Similarity=0.275 Sum_probs=45.0
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeC
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLAD 131 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~ 131 (251)
+...+++|++.+|...+|.-|.+.+..++..|.+++++.. ++.+++.++.+|++.+.-.
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~ 192 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS---SPEKAAHAKALGAWETIDY 192 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEEET
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEeC
Confidence 4456778888566665899999999999999997665543 5678888889998765543
No 48
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=91.91 E-value=1.7 Score=38.18 Aligned_cols=58 Identities=26% Similarity=0.321 Sum_probs=43.4
Q ss_pred HHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEE
Q 025563 68 AEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVY 128 (251)
Q Consensus 68 a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 128 (251)
+++...+++|++.+| .++|.-|...+..|+.+|.+.++.+. .++.+++.++.+||+++
T Consensus 177 al~~~~~~~g~~VlV-~GaG~vG~~aiqlAk~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~i 234 (398)
T 1kol_A 177 GAVTAGVGPGSTVYV-AGAGPVGLAAAASARLLGAAVVIVGD--LNPARLAHAKAQGFEIA 234 (398)
T ss_dssp HHHHTTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCEEE
T ss_pred HHHHcCCCCCCEEEE-ECCcHHHHHHHHHHHHCCCCeEEEEc--CCHHHHHHHHHcCCcEE
Confidence 344556778888555 55799999999999999996555542 35788899999999844
No 49
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=91.81 E-value=1.7 Score=37.18 Aligned_cols=60 Identities=23% Similarity=0.345 Sum_probs=45.3
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
+...+++|++.+|...+|.-|.+.+..++..|.+++++.. ++.+++.++.+|++.+....
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~~~~ 201 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS---TDEKLKIAKEYGAEYLINAS 201 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEETT
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEEeCC
Confidence 3456778888556655899999999999999998665543 46788888999988665443
No 50
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.09 E-value=1.9 Score=37.34 Aligned_cols=60 Identities=22% Similarity=0.182 Sum_probs=45.9
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
+...+++|++.+|...+|.-|.+++..++..|.+++++. .++.+++.++.+|++.+....
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~~~~~ 220 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATA---GSTGKCEACERLGAKRGINYR 220 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHHTCSEEEETT
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHhcCCCEEEeCC
Confidence 456677888866666789999999999999999855543 246788888889998665443
No 51
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=90.86 E-value=2.5 Score=36.10 Aligned_cols=59 Identities=24% Similarity=0.349 Sum_probs=45.0
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHH-HHcCCEEEEeC
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVL-RALGAEVYLAD 131 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~-~~~Ga~v~~v~ 131 (251)
+...+++|++.+|...+|.-|.+++..++..|.+++++. .++.+++.+ +.+|++.+.-.
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~---~~~~~~~~~~~~~g~~~~~~~ 202 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIA---GGAEKCRFLVEELGFDGAIDY 202 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHTTCCSEEEET
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHHcCCCEEEEC
Confidence 566778888866666669999999999999999766553 245777777 88999765443
No 52
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=90.54 E-value=2 Score=37.56 Aligned_cols=61 Identities=23% Similarity=0.306 Sum_probs=45.0
Q ss_pred HHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeC
Q 025563 68 AEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLAD 131 (251)
Q Consensus 68 a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~ 131 (251)
+++...+++|++.+| .++|..|.+.+..|+.+|.+-++.+ +.++.+++.++.+|++.+.-.
T Consensus 174 ~l~~~~~~~g~~VlV-~GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~vi~~ 234 (370)
T 4ej6_A 174 GVDLSGIKAGSTVAI-LGGGVIGLLTVQLARLAGATTVILS--TRQATKRRLAEEVGATATVDP 234 (370)
T ss_dssp HHHHHTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHTCSEEECT
T ss_pred HHHhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCCEEECC
Confidence 345556778888555 4569999999999999999555555 334678889999999866543
No 53
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=90.45 E-value=2.7 Score=36.51 Aligned_cols=57 Identities=28% Similarity=0.316 Sum_probs=44.0
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEe
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLA 130 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v 130 (251)
+...+++|++.+|.. +|.-|.+.+..|+.+|.+++++. .++.+++.++.+|++.+.-
T Consensus 183 ~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi~ 239 (363)
T 3uog_A 183 EKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTS---SSREKLDRAFALGADHGIN 239 (363)
T ss_dssp TTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEe---cCchhHHHHHHcCCCEEEc
Confidence 456678888855555 89999999999999999766553 3467888899999976554
No 54
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=90.08 E-value=2.7 Score=36.48 Aligned_cols=59 Identities=25% Similarity=0.314 Sum_probs=44.1
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeC
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLAD 131 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~ 131 (251)
+.+.+++|++.+|...+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.+.-.
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~ 215 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS---SDEKSAFLKSLGCDRPINY 215 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEET
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHcCCcEEEec
Confidence 3456778888555555799999999999999997555543 3678888889999865543
No 55
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=90.00 E-value=1.8 Score=37.40 Aligned_cols=59 Identities=17% Similarity=0.080 Sum_probs=43.8
Q ss_pred HHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCC-cEEEEecCCCcHHHHHHHHHcCCEEEEe
Q 025563 68 AEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGY-KLIIVMPSIASMERRIVLRALGAEVYLA 130 (251)
Q Consensus 68 a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~-~~~ivvp~~~~~~~~~~~~~~Ga~v~~v 130 (251)
+++...+++|++.+|. ++|.-|.+.+..|+.+|. ++++ + +.++.+++.++.+||+.+.-
T Consensus 158 al~~~~~~~g~~VlV~-GaG~vG~~a~qla~~~Ga~~Vi~-~--~~~~~~~~~~~~lGa~~vi~ 217 (352)
T 3fpc_A 158 GAELANIKLGDTVCVI-GIGPVGLMSVAGANHLGAGRIFA-V--GSRKHCCDIALEYGATDIIN 217 (352)
T ss_dssp HHHHTTCCTTCCEEEE-CCSHHHHHHHHHHHTTTCSSEEE-E--CCCHHHHHHHHHHTCCEEEC
T ss_pred HHHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCcEEEE-E--CCCHHHHHHHHHhCCceEEc
Confidence 4456667788885555 579999999999999998 4544 3 34467888999999975543
No 56
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=89.87 E-value=2.2 Score=36.28 Aligned_cols=60 Identities=28% Similarity=0.351 Sum_probs=45.4
Q ss_pred HHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeC
Q 025563 68 AEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLAD 131 (251)
Q Consensus 68 a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~ 131 (251)
+++...+++|++.+|...+|.-|.+.+..|+.+|.+++++. +..+++.++.+|++-+.-.
T Consensus 144 al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~----~~~~~~~~~~lGa~~~i~~ 203 (321)
T 3tqh_A 144 ALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA----SKRNHAFLKALGAEQCINY 203 (321)
T ss_dssp HHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----CHHHHHHHHHHTCSEEEET
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe----ccchHHHHHHcCCCEEEeC
Confidence 44667788888855555589999999999999999766553 3456888899999865443
No 57
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=89.84 E-value=1.3 Score=38.78 Aligned_cols=53 Identities=21% Similarity=0.102 Sum_probs=41.0
Q ss_pred CCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeC
Q 025563 75 TPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLAD 131 (251)
Q Consensus 75 ~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~ 131 (251)
.+|++.+|...+|..|.+.+..|+.+|.++++++ ++.+++.++.+|++.+.-.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~vi~~ 215 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC----SPHNFDLAKSRGAEEVFDY 215 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEET
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CHHHHHHHHHcCCcEEEEC
Confidence 5778756666669999999999999999876654 3567888999999755543
No 58
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=89.66 E-value=1.9 Score=37.19 Aligned_cols=59 Identities=25% Similarity=0.397 Sum_probs=44.2
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeC
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLAD 131 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~ 131 (251)
+...+++|++.+|...+|.-|.+++..++..|.+++++... +.+++.++.+|++.+.-.
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~v~~~ 211 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR---TAATEFVKSVGADIVLPL 211 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS---GGGHHHHHHHTCSEEEES
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCcEEecC
Confidence 55667788885666666999999999999999987666543 356677778898866543
No 59
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=89.66 E-value=2.9 Score=36.01 Aligned_cols=54 Identities=30% Similarity=0.402 Sum_probs=43.5
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEE
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEV 127 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v 127 (251)
+...+++|++.+|...+|.-|.+++..++..|.+++++ .++.+++.++.+|++.
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~----~~~~~~~~~~~lGa~~ 197 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT----ARGSDLEYVRDLGATP 197 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE----ECHHHHHHHHHHTSEE
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE----eCHHHHHHHHHcCCCE
Confidence 56677888885666658999999999999999976554 2467888899999998
No 60
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.42 E-value=3.4 Score=36.96 Aligned_cols=50 Identities=20% Similarity=0.262 Sum_probs=40.7
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQA 133 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~ 133 (251)
|+..+.|..|..+|...+..|++++++ +..+.+++.++..|.+++.-+..
T Consensus 7 viIiG~Gr~G~~va~~L~~~g~~vvvI---d~d~~~v~~~~~~g~~vi~GDat 56 (413)
T 3l9w_A 7 VIIAGFGRFGQITGRLLLSSGVKMVVL---DHDPDHIETLRKFGMKVFYGDAT 56 (413)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEE---ECCHHHHHHHHHTTCCCEESCTT
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEE---ECCHHHHHHHHhCCCeEEEcCCC
Confidence 788888999999999999999998887 34467788888888877666553
No 61
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=89.19 E-value=2 Score=36.95 Aligned_cols=61 Identities=20% Similarity=0.260 Sum_probs=44.3
Q ss_pred HHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 69 EEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 69 ~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
.+...+++|++.+|...+|.-|.+.+..++.+|.+++++.... .+++.++.+|++.+.-..
T Consensus 137 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~---~~~~~~~~lga~~~~~~~ 197 (340)
T 3gms_A 137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN---KHTEELLRLGAAYVIDTS 197 (340)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS---TTHHHHHHHTCSEEEETT
T ss_pred HHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHhCCCcEEEeCC
Confidence 3556678888866666667999999999999999876665433 456667778998655433
No 62
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=88.25 E-value=4.1 Score=35.35 Aligned_cols=59 Identities=22% Similarity=0.291 Sum_probs=43.2
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeC
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLAD 131 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~ 131 (251)
+...+++|++.+|. ++|.-|.+.+..|+.+|.+.++.+. .++.+++.++.+|++.+.-.
T Consensus 184 ~~~~~~~g~~VlV~-GaG~vG~~a~qlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~~ 242 (371)
T 1f8f_A 184 NALKVTPASSFVTW-GAGAVGLSALLAAKVCGASIIIAVD--IVESRLELAKQLGATHVINS 242 (371)
T ss_dssp TTTCCCTTCEEEEE-SCSHHHHHHHHHHHHHTCSEEEEEE--SCHHHHHHHHHHTCSEEEET
T ss_pred hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCCEEecC
Confidence 45567788885555 5799999999999999986444442 34678888899999765543
No 63
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=87.91 E-value=3.2 Score=36.60 Aligned_cols=57 Identities=30% Similarity=0.411 Sum_probs=42.9
Q ss_pred CCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 73 LITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 73 ~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
.+.+|++.+| .++|.-|.+.+..|+.+|.+-++.+ +.++.+++.++.+||+.+.-..
T Consensus 210 ~~~~g~~VlV-~GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~~~~lGa~~vi~~~ 266 (404)
T 3ip1_A 210 GIRPGDNVVI-LGGGPIGLAAVAILKHAGASKVILS--EPSEVRRNLAKELGADHVIDPT 266 (404)
T ss_dssp CCCTTCEEEE-ECCSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHTCSEEECTT
T ss_pred CCCCCCEEEE-ECCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCCEEEcCC
Confidence 5778888555 4569999999999999999545544 3357888999999998665443
No 64
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=87.84 E-value=6.4 Score=33.47 Aligned_cols=57 Identities=26% Similarity=0.375 Sum_probs=42.8
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
+...+.+|++.+|...+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+.
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~ 195 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKIAYLKQIGFDAAF 195 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCcEEE
Confidence 4556777888677776799999999999999997665532 35677777888986543
No 65
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=87.80 E-value=2.5 Score=35.26 Aligned_cols=73 Identities=7% Similarity=-0.052 Sum_probs=51.6
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEe--CCCCChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLA--DQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v--~~~~~~~~~~~~a~~~~~~~ 150 (251)
|++.+|+.+++--|+++|..-.+.|.+++++-.........+.++..|.++..+ +-. +.++..+..++..++.
T Consensus 7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQ-DDAQCRDAVAQTIATF 81 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecC-CHHHHHHHHHHHHHHh
Confidence 466788888899999999999999999888776655556666777777665554 433 4555555555555544
No 66
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=87.77 E-value=4.7 Score=34.78 Aligned_cols=58 Identities=19% Similarity=0.221 Sum_probs=43.4
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEe
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLA 130 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v 130 (251)
+...+.+|++.+|...+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+.-
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~~ 213 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG---SQKKLQMAEKLGAAAGFN 213 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCcEEEe
Confidence 4556778888566666899999999999999997655442 357777788899875543
No 67
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.72 E-value=7.9 Score=29.69 Aligned_cols=49 Identities=20% Similarity=0.094 Sum_probs=37.9
Q ss_pred EEEeccChHHHHHHHHHHHC-CCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 81 LIETTGGNTGIGLAFIAALR-GYKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~-G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
++..+.|..|..+|...+.. |.+++++-. ++.+.+.++..|.+++..+.
T Consensus 42 v~IiG~G~~G~~~a~~L~~~~g~~V~vid~---~~~~~~~~~~~g~~~~~gd~ 91 (183)
T 3c85_A 42 VLILGMGRIGTGAYDELRARYGKISLGIEI---REEAAQQHRSEGRNVISGDA 91 (183)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCSCEEEEES---CHHHHHHHHHTTCCEEECCT
T ss_pred EEEECCCHHHHHHHHHHHhccCCeEEEEEC---CHHHHHHHHHCCCCEEEcCC
Confidence 66667899999999999998 999887642 35677777788888766554
No 68
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=87.62 E-value=2.8 Score=36.15 Aligned_cols=52 Identities=17% Similarity=0.274 Sum_probs=38.4
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
++.+|...+|.-|.+.+..|+.+|.+++++.. ++.+++.++.+|++.+.-..
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~~ 217 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVR---RDEQIALLKDIGAAHVLNEK 217 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---CGGGHHHHHHHTCSEEEETT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEECC
Confidence 45455668899999999999999997666543 34567777889997655443
No 69
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=87.52 E-value=4 Score=35.69 Aligned_cols=54 Identities=30% Similarity=0.338 Sum_probs=40.4
Q ss_pred CCCeEEEEe-ccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 76 PGKSVLIET-TGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 76 ~g~~~vv~~-ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
+|++.+|.. .+|..|.+.+..|+.+|.+++++. .++.+++.++.+|++.+.-..
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~~~~~ 224 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIV---RKQEQADLLKAQGAVHVCNAA 224 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEE---SSHHHHHHHHHTTCSCEEETT
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEE---CCHHHHHHHHhCCCcEEEeCC
Confidence 345545653 789999999999999999866654 357888999999997555433
No 70
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=87.36 E-value=6.2 Score=33.88 Aligned_cols=52 Identities=27% Similarity=0.349 Sum_probs=40.5
Q ss_pred CCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEe
Q 025563 76 PGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLA 130 (251)
Q Consensus 76 ~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v 130 (251)
+|++.+|...+|.-|.+.+..++.+|.+++++. .++.+++.++.+|++.+..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi~ 201 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTA---SRNETIEWTKKMGADIVLN 201 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEC---CSHHHHHHHHHHTCSEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHhcCCcEEEE
Confidence 677766666789999999999999999755543 3467888888899876544
No 71
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=87.24 E-value=2.7 Score=33.72 Aligned_cols=76 Identities=22% Similarity=0.358 Sum_probs=55.2
Q ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEe-------cC--CCcHHHHHHHH
Q 025563 51 EPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVM-------PS--IASMERRIVLR 121 (251)
Q Consensus 51 ~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivv-------p~--~~~~~~~~~~~ 121 (251)
+|.--+=+..+...+..|.+.|. +..||.+++|.++..++-.. -| +.++|. |. ..+++..+.++
T Consensus 30 ~~G~eNT~~tl~la~era~e~~I----k~iVVASssG~TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 102 (206)
T 1t57_A 30 EPGKENTERVLELVGERADQLGI----RNFVVASVSGETALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDALL 102 (206)
T ss_dssp SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCCHHHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 45556677788888888988885 34466666699987665533 45 777666 32 35789999999
Q ss_pred HcCCEEEEeCCC
Q 025563 122 ALGAEVYLADQA 133 (251)
Q Consensus 122 ~~Ga~v~~v~~~ 133 (251)
..|.+|+.-...
T Consensus 103 ~~G~~V~t~tH~ 114 (206)
T 1t57_A 103 ERGVNVYAGSHA 114 (206)
T ss_dssp HHTCEEECCSCT
T ss_pred hCCCEEEEeecc
Confidence 999999987653
No 72
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=87.21 E-value=7.6 Score=33.46 Aligned_cols=56 Identities=23% Similarity=0.345 Sum_probs=42.9
Q ss_pred cCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 71 KGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
...+++|++.+|...+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+.
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~ 220 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG---TEEGQKIVLQNGAHEVF 220 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---ChhHHHHHHHcCCCEEE
Confidence 566778888666666799999999999999997655542 35677788889987544
No 73
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=87.14 E-value=5.3 Score=34.22 Aligned_cols=58 Identities=26% Similarity=0.307 Sum_probs=43.1
Q ss_pred HHHc-CCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEE
Q 025563 68 AEEK-GLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVY 128 (251)
Q Consensus 68 a~~~-g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 128 (251)
++.+ ..+++|++.+|...+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+
T Consensus 157 al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~ga~~~ 215 (343)
T 2eih_A 157 MVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG---SEDKLRRAKALGADET 215 (343)
T ss_dssp HHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEE
T ss_pred HHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCCEE
Confidence 4443 45677888666666699999999999999997665543 3577777888898754
No 74
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=86.95 E-value=6.7 Score=30.43 Aligned_cols=55 Identities=31% Similarity=0.493 Sum_probs=39.8
Q ss_pred cCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEE
Q 025563 71 KGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVY 128 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 128 (251)
...+.+|++.+|...+|..|.+++..++..|.+++++.. ++.+.+.++.+|++.+
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~~ 87 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---SDAKREMLSRLGVEYV 87 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHTTCCSEE
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEE
Confidence 455677887555555799999999999999987665542 3566667777887643
No 75
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=86.89 E-value=3.6 Score=35.59 Aligned_cols=60 Identities=27% Similarity=0.336 Sum_probs=45.7
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHHcCCEEEE
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRALGAEVYL 129 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~ 129 (251)
+...+++|++.+|...+|.-|.+.+..|+.+|.+.++++.... ...+++.++.+||+-+.
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI 221 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE
Confidence 4456778888555555699999999999999999888775543 35577888999997554
No 76
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=86.62 E-value=7.5 Score=33.57 Aligned_cols=56 Identities=16% Similarity=0.134 Sum_probs=41.4
Q ss_pred CCCCCCCeEEEEeccChHHHHHHHHHHHC-CCcEEEEecCCCcHHHHHHHHHcCCEEEEeC
Q 025563 72 GLITPGKSVLIETTGGNTGIGLAFIAALR-GYKLIIVMPSIASMERRIVLRALGAEVYLAD 131 (251)
Q Consensus 72 g~~~~g~~~vv~~ssGN~g~alA~~a~~~-G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~ 131 (251)
..+++|++ |+..++|.-|...+..|+.+ |.+++++. .++.+++.++.+||+.+.-.
T Consensus 182 ~~~~~g~~-VlV~GaG~vG~~avqlak~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi~~ 238 (359)
T 1h2b_A 182 RTLYPGAY-VAIVGVGGLGHIAVQLLKVMTPATVIALD---VKEEKLKLAERLGADHVVDA 238 (359)
T ss_dssp TTCCTTCE-EEEECCSHHHHHHHHHHHHHCCCEEEEEE---SSHHHHHHHHHTTCSEEEET
T ss_pred cCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCeEEEEe---CCHHHHHHHHHhCCCEEEec
Confidence 56778888 44455589999999999999 98754443 24678888999999765443
No 77
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=86.58 E-value=6.7 Score=33.62 Aligned_cols=60 Identities=27% Similarity=0.281 Sum_probs=43.4
Q ss_pred HHHcCCCCCCCeEEEEeccChHHHHHHHHHHHC-CCcEEEEecCCCcHHHHHHHHHcCCEEEEe
Q 025563 68 AEEKGLITPGKSVLIETTGGNTGIGLAFIAALR-GYKLIIVMPSIASMERRIVLRALGAEVYLA 130 (251)
Q Consensus 68 a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~-G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v 130 (251)
++++..+++|++.+|...+|..|.+++..++.. |.+++++.. ++.+++.++.+|++.+.-
T Consensus 162 ~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~~ 222 (347)
T 1jvb_A 162 AVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV---REEAVEAAKRAGADYVIN 222 (347)
T ss_dssp HHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred HHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCCEEec
Confidence 344456777888666666669999999999999 997555432 356777788899875543
No 78
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=86.30 E-value=5.9 Score=33.74 Aligned_cols=56 Identities=25% Similarity=0.306 Sum_probs=41.6
Q ss_pred cCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 71 KGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
...+++|++.+|...+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+.
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~g~~~~~ 195 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS---TEEKAETARKLGCHHTI 195 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence 456778888566655799999999999999997665543 35677777888887543
No 79
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=86.04 E-value=5.7 Score=34.16 Aligned_cols=57 Identities=25% Similarity=0.285 Sum_probs=41.8
Q ss_pred HHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 69 EEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 69 ~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
++...+++|++.+|. ++|.-|.+.+..|+.+|.+ ++.+. .++.+++.++.+|++.+.
T Consensus 161 l~~~~~~~g~~VlV~-GaG~vG~~a~qla~~~Ga~-Vi~~~--~~~~~~~~~~~lGa~~~~ 217 (352)
T 1e3j_A 161 CRRAGVQLGTTVLVI-GAGPIGLVSVLAAKAYGAF-VVCTA--RSPRRLEVAKNCGADVTL 217 (352)
T ss_dssp HHHHTCCTTCEEEEE-CCSHHHHHHHHHHHHTTCE-EEEEE--SCHHHHHHHHHTTCSEEE
T ss_pred HHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCE-EEEEc--CCHHHHHHHHHhCCCEEE
Confidence 344456778885554 4699999999999999998 44432 346788889999997544
No 80
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=86.00 E-value=3.6 Score=35.58 Aligned_cols=58 Identities=22% Similarity=0.226 Sum_probs=42.6
Q ss_pred CCCCCC-CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEE
Q 025563 72 GLITPG-KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYL 129 (251)
Q Consensus 72 g~~~~g-~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~ 129 (251)
+.+++| ++.+|...+|.-|.+.+..|+.+|.++++++..... ..+.+.++.+||+.+.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI 221 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE
Confidence 467788 775555556999999999999999988777754433 3445667889997544
No 81
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=85.86 E-value=6.7 Score=33.23 Aligned_cols=56 Identities=21% Similarity=0.191 Sum_probs=41.9
Q ss_pred cCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 71 KGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
...+.+|++.+|...+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+.
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~ 190 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---TAQKAQSALKAGAWQVI 190 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence 556778888666666899999999999999997665543 35677777778887543
No 82
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=85.75 E-value=7.9 Score=33.17 Aligned_cols=59 Identities=22% Similarity=0.341 Sum_probs=42.4
Q ss_pred HHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 68 AEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 68 a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
++++..+.+|++.+|...+|..|.+++..++..|.+++++... +.+++.++.+|++.+.
T Consensus 161 ~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~---~~~~~~~~~~g~~~~~ 219 (347)
T 2hcy_A 161 ALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG---EGKEELFRSIGGEVFI 219 (347)
T ss_dssp HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS---TTHHHHHHHTTCCEEE
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC---HHHHHHHHHcCCceEE
Confidence 4444456778886777777999999999999999976665432 3455667778987443
No 83
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=85.48 E-value=4 Score=35.59 Aligned_cols=57 Identities=21% Similarity=0.291 Sum_probs=41.2
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
+...+++|++.+|. ++|.-|.+.+..|+.+|.+-++.+. .++.+++.++.+||+.+.
T Consensus 187 ~~~~~~~g~~VlV~-GaG~vG~~a~q~a~~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi 243 (378)
T 3uko_A 187 NTAKVEPGSNVAIF-GLGTVGLAVAEGAKTAGASRIIGID--IDSKKYETAKKFGVNEFV 243 (378)
T ss_dssp TTTCCCTTCCEEEE-CCSHHHHHHHHHHHHHTCSCEEEEC--SCTTHHHHHHTTTCCEEE
T ss_pred hhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHcCCcEEE
Confidence 55667788884554 5699999999999999994344442 234677888999997644
No 84
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=85.29 E-value=7.6 Score=33.28 Aligned_cols=57 Identities=33% Similarity=0.404 Sum_probs=41.8
Q ss_pred HHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCC-cEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 68 AEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGY-KLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 68 a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~-~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
++++..+ +|++.+|... |.-|.+++..++.+|. +++++.. ++.+++.++.+|++.+.
T Consensus 160 ~l~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~~Ga~~~~ 217 (348)
T 2d8a_A 160 TVLAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEP---SDFRRELAKKVGADYVI 217 (348)
T ss_dssp HHTTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHHHHHHHTCSEEE
T ss_pred HHHhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEEE
Confidence 3455556 7887555554 9999999999999998 6655432 36788888899997554
No 85
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=85.19 E-value=9.6 Score=32.70 Aligned_cols=57 Identities=28% Similarity=0.471 Sum_probs=41.9
Q ss_pred HcCCCCCC--CeEEEEeccChHHHHHHHHHHHCCC-cEEEEecCCCcHHHHHHHHH-cCCEEEE
Q 025563 70 EKGLITPG--KSVLIETTGGNTGIGLAFIAALRGY-KLIIVMPSIASMERRIVLRA-LGAEVYL 129 (251)
Q Consensus 70 ~~g~~~~g--~~~vv~~ssGN~g~alA~~a~~~G~-~~~ivvp~~~~~~~~~~~~~-~Ga~v~~ 129 (251)
+...+++| ++.+|...+|.-|.+++..++..|. +++++.. ++.+++.++. +|++.+.
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~---~~~~~~~~~~~~g~~~~~ 212 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG---THEKCILLTSELGFDAAI 212 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTSCCSEEE
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC---CHHHHHHHHHHcCCceEE
Confidence 45667778 7766666669999999999999999 6655543 3567777776 8986543
No 86
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=85.15 E-value=2.3 Score=38.22 Aligned_cols=57 Identities=28% Similarity=0.321 Sum_probs=45.1
Q ss_pred CCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeC
Q 025563 72 GLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLAD 131 (251)
Q Consensus 72 g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~ 131 (251)
..+++|++.+|...+|..|.+.+..|+.+|.+++++.. ++.+++.++.+|++.+.-.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~---~~~~~~~~~~lGa~~vi~~ 280 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVS---SPQKAEICRAMGAEAIIDR 280 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCCEEEET
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC---CHHHHHHHHhhCCcEEEec
Confidence 45678888555555599999999999999998777663 5788999999999866543
No 87
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=85.04 E-value=5.2 Score=34.93 Aligned_cols=58 Identities=28% Similarity=0.316 Sum_probs=43.2
Q ss_pred HHHcCC-CCCCCeEEEEeccChHHHHHHHHHHHCC-CcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 68 AEEKGL-ITPGKSVLIETTGGNTGIGLAFIAALRG-YKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 68 a~~~g~-~~~g~~~vv~~ssGN~g~alA~~a~~~G-~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
++++.. +++|++.+|.. +|.-|.+.+..|+.+| .+++++.+ ++.+++.++.+|++.+.
T Consensus 186 al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi 245 (380)
T 1vj0_A 186 AFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEEIGADLTL 245 (380)
T ss_dssp HHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHHTTCSEEE
T ss_pred HHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHHcCCcEEE
Confidence 344555 67788855555 8999999999999999 46655542 46788888999997544
No 88
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=84.80 E-value=1.7 Score=36.90 Aligned_cols=58 Identities=22% Similarity=0.154 Sum_probs=43.8
Q ss_pred HHHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 67 DAEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 67 ~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
.+++...+++|++.+|... |.-|.+.+..|+.+|.+++++. ++.+++.++.+|++.+.
T Consensus 133 ~al~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~ 190 (315)
T 3goh_A 133 QAFEKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS----ASLSQALAAKRGVRHLY 190 (315)
T ss_dssp HHHTTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC----SSCCHHHHHHHTEEEEE
T ss_pred HHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE----ChhhHHHHHHcCCCEEE
Confidence 3456677788888555555 9999999999999999766654 34577778889997665
No 89
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=84.69 E-value=7 Score=31.75 Aligned_cols=72 Identities=14% Similarity=0.106 Sum_probs=46.9
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|.-|+++|..-.+.|.+++++..... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEALFALAERE 76 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 345688888899999999999999998777654333 45556677678777665432 2334444444444443
No 90
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=84.59 E-value=8.1 Score=33.87 Aligned_cols=57 Identities=28% Similarity=0.237 Sum_probs=41.8
Q ss_pred HHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCC-cEEEEecCCCcHHHHHHHHHcCCEEE
Q 025563 68 AEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGY-KLIIVMPSIASMERRIVLRALGAEVY 128 (251)
Q Consensus 68 a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~-~~~ivvp~~~~~~~~~~~~~~Ga~v~ 128 (251)
+++...+++|++.+| .++|.-|...+..|+.+|. +++++. .++.+++.++.+|++++
T Consensus 177 al~~~~~~~g~~VlV-~GaG~vG~~aiqlak~~Ga~~Vi~~~---~~~~~~~~a~~lGa~~i 234 (398)
T 2dph_A 177 GCVSAGVKPGSHVYI-AGAGPVGRCAAAGARLLGAACVIVGD---QNPERLKLLSDAGFETI 234 (398)
T ss_dssp HHHHTTCCTTCEEEE-ECCSHHHHHHHHHHHHHTCSEEEEEE---SCHHHHHHHHTTTCEEE
T ss_pred HHHHcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCCEEEEEc---CCHHHHHHHHHcCCcEE
Confidence 345566778888455 4569999999999999998 444433 24678888999999744
No 91
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=84.30 E-value=4.1 Score=35.00 Aligned_cols=58 Identities=14% Similarity=0.129 Sum_probs=41.8
Q ss_pred HHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 68 AEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 68 a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
++.+..+++|++.+| .++|.-|.+.+..|+.+|.+++++.. ++.+++.++.+|++.+.
T Consensus 168 ~l~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~v~ 225 (348)
T 3two_A 168 PLKFSKVTKGTKVGV-AGFGGLGSMAVKYAVAMGAEVSVFAR---NEHKKQDALSMGVKHFY 225 (348)
T ss_dssp HHHHTTCCTTCEEEE-ESCSHHHHHHHHHHHHTTCEEEEECS---SSTTHHHHHHTTCSEEE
T ss_pred HHHhcCCCCCCEEEE-ECCcHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHhcCCCeec
Confidence 344445778888555 55699999999999999997555432 33566778889997655
No 92
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=84.22 E-value=15 Score=29.79 Aligned_cols=91 Identities=11% Similarity=0.054 Sum_probs=52.7
Q ss_pred EEEEeCCCCCh---HHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHH
Q 025563 126 EVYLADQAGGF---EGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGR 202 (251)
Q Consensus 126 ~v~~v~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~ 202 (251)
+|..+.+..+. .++.+-.++..+++|+.-+..........+.++. ...+++++- +++|+|||. +...+.|+..
T Consensus 137 ~i~~i~g~~~~~~~~~R~~gf~~~l~~~~g~~~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~ 212 (293)
T 3l6u_A 137 RIVEITGTANVYTTNERHRGFLKGIENEPTLSIVDSVSGNYDPVTSER-VMRQVIDSG-IPFDAVYCH--NDDIAMGVLE 212 (293)
T ss_dssp EEEEEECSTTCHHHHHHHHHHHHHHTTCTTEEEEEEEECTTCHHHHHH-HHHHHHHTT-CCCSEEEES--SHHHHHHHHH
T ss_pred eEEEEECCCCCchHHHHHHHHHHHHHhCCCcEEeeeccCCCCHHHHHH-HHHHHHHhC-CCCCEEEEC--CchHHHHHHH
Confidence 67666543222 2344444555555545433221112223333443 344555543 578999875 5667779999
Q ss_pred HHHhhCC-CcEEEEEeCCC
Q 025563 203 FLKEKNP-NIKVYGVEPTE 220 (251)
Q Consensus 203 ~~~~~~~-~~~vigVep~~ 220 (251)
++++.+- ++.|+|.+-..
T Consensus 213 al~~~g~~di~vig~d~~~ 231 (293)
T 3l6u_A 213 ALKKAKISGKIVVGIDGNR 231 (293)
T ss_dssp HHHHTTCCCCEEEEEECCH
T ss_pred HHHhCCCCCeEEEEecCCH
Confidence 9999865 89999998653
No 93
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=84.10 E-value=5.9 Score=34.44 Aligned_cols=55 Identities=24% Similarity=0.244 Sum_probs=41.3
Q ss_pred CCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 74 ITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 74 ~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
+++|++.+|...+|.-|.+.+..|+.+|.+++++. ++.+++.++.+|++.+.-..
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~~~~ 235 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC----SQDASELVRKLGADDVIDYK 235 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEETT
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe----ChHHHHHHHHcCCCEEEECC
Confidence 67788856666589999999999999998765543 23567778999998655433
No 94
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=84.08 E-value=4.1 Score=33.89 Aligned_cols=74 Identities=18% Similarity=0.108 Sum_probs=50.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC-CcHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI-ASMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
|++.+|+.+++--|+++|..-.+.|.+++++-... .-....+.++..|.+++.+..+ .+.++..+..++..++.
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45668888889999999999999999876653321 1223456678889888665432 35566666666666654
No 95
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=83.98 E-value=9.4 Score=31.06 Aligned_cols=73 Identities=11% Similarity=0.030 Sum_probs=49.1
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC-CcHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI-ASMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|..-.+.|.+++++.... ......+.++..|.++..+..+ .+.++..+.+++..++
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 35568888889999999999999999877765432 2344556677778887666432 2444555555555444
No 96
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=83.82 E-value=24 Score=31.68 Aligned_cols=73 Identities=14% Similarity=0.172 Sum_probs=49.3
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+|--|.++|..-.+.|.+++++-.........+..+..+.+++.++-. +.++..+...+..++.
T Consensus 213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvt-d~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVT-ADDAVDKITAHVTEHH 285 (454)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTT-STTHHHHHHHHHHHHS
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecC-CHHHHHHHHHHHHHHc
Confidence 456688888899999999998889998666543333333444556678888888765 4455555555555554
No 97
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=83.72 E-value=3.9 Score=36.56 Aligned_cols=55 Identities=24% Similarity=0.308 Sum_probs=44.0
Q ss_pred CCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 72 GLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 72 g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
..+.+|++.+|...+|.-|.+.+..++..|.+++++. .++.+++.++.+|++.+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~---~~~~~~~~~~~lGa~~~i 270 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVV---SSAQKEAAVRALGCDLVI 270 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHTTCCCEE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHhcCCCEEE
Confidence 5677888855555569999999999999999877765 357888889999997654
No 98
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=83.58 E-value=6.1 Score=34.27 Aligned_cols=57 Identities=21% Similarity=0.207 Sum_probs=40.8
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
+...+++|++.+|. ++|.-|.+.+..|+.+|.+-++.+. .++.+++.++.+||+.+.
T Consensus 185 ~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi 241 (373)
T 1p0f_A 185 NTAKVTPGSTCAVF-GLGGVGFSAIVGCKAAGASRIIGVG--THKDKFPKAIELGATECL 241 (373)
T ss_dssp TTTCCCTTCEEEEE-CCSHHHHHHHHHHHHHTCSEEEEEC--SCGGGHHHHHHTTCSEEE
T ss_pred hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCcEEE
Confidence 45567788885554 5799999999999999985444442 235677788899997543
No 99
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=83.40 E-value=7.4 Score=31.96 Aligned_cols=70 Identities=21% Similarity=0.215 Sum_probs=49.2
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+|--|+++|..-.+.|.+++++..... ...+.++..++..+.++-. +.++..+..++..++.
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEH--ASVTELRQAGAVALYGDFS-CETGIMAFIDLLKTQT 97 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC--HHHHHHHHHTCEEEECCTT-SHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH--HHHHHHHhcCCeEEECCCC-CHHHHHHHHHHHHHhc
Confidence 44588888899999999999999999877664432 2245556678888877765 5555555666665554
No 100
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=83.38 E-value=11 Score=32.23 Aligned_cols=53 Identities=25% Similarity=0.264 Sum_probs=38.8
Q ss_pred CCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 73 LITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 73 ~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
.+++|++.+|... |.-|.+++..++.+|.+++++. .++.+++.++.+|++.+.
T Consensus 161 ~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~~ 213 (339)
T 1rjw_A 161 GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVD---IGDEKLELAKELGADLVV 213 (339)
T ss_dssp TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEEC---SCHHHHHHHHHTTCSEEE
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHCCCCEEe
Confidence 4667777555544 7799999999999998655443 246788888899997543
No 101
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=83.31 E-value=8 Score=31.98 Aligned_cols=66 Identities=15% Similarity=0.127 Sum_probs=44.7
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCC-CChHHHHHH
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQA-GGFEGILRK 142 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~ 142 (251)
|++.+|+..+|--|+++|....+.|.+++++-.........+.++..|.++..+..+ .+.++..+.
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 97 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANV 97 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence 456688888899999999999999999877763332334456677778877665432 244444443
No 102
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=83.28 E-value=11 Score=32.21 Aligned_cols=57 Identities=19% Similarity=0.242 Sum_probs=42.0
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHH-HcCCEEEE
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLR-ALGAEVYL 129 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~-~~Ga~v~~ 129 (251)
+...+++|++.+|...+|.-|.+++..++..|.+++++.. ++.+++.++ .+|++.+.
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~~g~~~~~ 206 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG---SKEKVDLLKTKFGFDDAF 206 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTSCCSEEE
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCceEE
Confidence 4456777888566666799999999999999987555432 457777777 68986543
No 103
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=83.02 E-value=7.6 Score=33.67 Aligned_cols=57 Identities=25% Similarity=0.292 Sum_probs=40.8
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
+...+++|++.+|. ++|.-|.+.+..|+.+|.+-++.+. .++.+++.++.+|++.+.
T Consensus 189 ~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi 245 (376)
T 1e3i_A 189 NTAKVTPGSTCAVF-GLGCVGLSAIIGCKIAGASRIIAID--INGEKFPKAKALGATDCL 245 (376)
T ss_dssp TTSCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCSEEE
T ss_pred HhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHhCCcEEE
Confidence 45667788885554 5799999999999999984344442 235677788889997543
No 104
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=82.52 E-value=5.5 Score=34.94 Aligned_cols=66 Identities=27% Similarity=0.263 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHH-cCC-CCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEE
Q 025563 59 RIALSMIKDAEE-KGL-ITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVY 128 (251)
Q Consensus 59 R~a~~~l~~a~~-~g~-~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 128 (251)
|+..+.++.+.+ .|. -..|++ |+..+.||-|..+|..++.+|.+++ +.+.+ ..+.+..+.+|++.+
T Consensus 155 ~Gv~~~~~~~~~~~G~~~L~Gkt-V~I~G~GnVG~~~A~~l~~~GakVv-vsD~~--~~~~~~a~~~ga~~v 222 (355)
T 1c1d_A 155 VGVFEAMKATVAHRGLGSLDGLT-VLVQGLGAVGGSLASLAAEAGAQLL-VADTD--TERVAHAVALGHTAV 222 (355)
T ss_dssp HHHHHHHHHHHHHTTCCCSTTCE-EEEECCSHHHHHHHHHHHHTTCEEE-EECSC--HHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHhcCCCCCCCCE-EEEECcCHHHHHHHHHHHHCCCEEE-EEeCC--ccHHHHHHhcCCEEe
Confidence 466667776654 353 235665 8888899999999999999999887 44433 333444556777644
No 105
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=82.40 E-value=12 Score=30.86 Aligned_cols=73 Identities=16% Similarity=0.182 Sum_probs=49.3
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC--------cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHh
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA--------SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEIL 147 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~--------~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~ 147 (251)
+++.+|+..+|--|+++|..-.+.|.+++++..... .......++..|.++..+..+ .+.++..+.+++..
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 85 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATV 85 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 456688888899999999999999998777764432 134455667778887666432 24455555555555
Q ss_pred hc
Q 025563 148 SN 149 (251)
Q Consensus 148 ~~ 149 (251)
++
T Consensus 86 ~~ 87 (274)
T 3e03_A 86 DT 87 (274)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 106
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=82.36 E-value=12 Score=31.74 Aligned_cols=62 Identities=21% Similarity=0.194 Sum_probs=40.3
Q ss_pred HHHcCCCCCCCeEEEEeccChHHHHHHHHHHHC-CCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCC
Q 025563 68 AEEKGLITPGKSVLIETTGGNTGIGLAFIAALR-GYKLIIVMPSIASMERRIVLRALGAEVYLADQA 133 (251)
Q Consensus 68 a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~-G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~ 133 (251)
+++....++|++ ++..++|.-|...+..++++ |.+++++. .++.|++..+.+|++.+.-...
T Consensus 155 ~l~~~~~~~g~~-VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~---~~~~r~~~~~~~Ga~~~i~~~~ 217 (348)
T 4eez_A 155 AIKVSGVKPGDW-QVIFGAGGLGNLAIQYAKNVFGAKVIAVD---INQDKLNLAKKIGADVTINSGD 217 (348)
T ss_dssp HHHHHTCCTTCE-EEEECCSHHHHHHHHHHHHTSCCEEEEEE---SCHHHHHHHHHTTCSEEEEC-C
T ss_pred eecccCCCCCCE-EEEEcCCCccHHHHHHHHHhCCCEEEEEE---CcHHHhhhhhhcCCeEEEeCCC
Confidence 344445677887 55556677766666666655 66655543 3467889999999987765543
No 107
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=81.89 E-value=7.1 Score=31.75 Aligned_cols=73 Identities=18% Similarity=0.121 Sum_probs=48.4
Q ss_pred CCeEEEEecc--ChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHH-HcC-CEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTG--GNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLR-ALG-AEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ss--GN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~-~~G-a~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+ |.-|+++|....+.|.+++++.........++.+. ..| ..++.++-. +.++..+.+++..++.
T Consensus 14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVA-DDAQIDALFASLKTHW 90 (271)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCC-CHHHHHHHHHHHHHHc
Confidence 4566777766 78999999999999999888765544455555553 333 344555544 5556666666666655
No 108
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=81.75 E-value=5.1 Score=33.30 Aligned_cols=74 Identities=16% Similarity=0.034 Sum_probs=50.9
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC-CcHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI-ASMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
|++.+|+.+++--|+++|..-.+.|.++++.-... ...+..+.++..|.+++.+..+ .+.++..+..++..++.
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 46668888889999999999999999866643221 1123456678889888877543 34455566666666665
No 109
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=81.72 E-value=9.7 Score=32.97 Aligned_cols=57 Identities=18% Similarity=0.270 Sum_probs=40.7
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
+...+++|++.+|. ++|.-|.+.+..|+.+|.+-++.+. .++.+++.++.+|++.+.
T Consensus 186 ~~~~~~~g~~VlV~-GaG~vG~~a~qla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi 242 (374)
T 1cdo_A 186 NTAKVEPGSTCAVF-GLGAVGLAAVMGCHSAGAKRIIAVD--LNPDKFEKAKVFGATDFV 242 (374)
T ss_dssp TTTCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCCEEE
T ss_pred hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEc--CCHHHHHHHHHhCCceEE
Confidence 45567788885555 5799999999999999985444442 235677788889997543
No 110
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=81.57 E-value=21 Score=29.34 Aligned_cols=72 Identities=17% Similarity=0.176 Sum_probs=46.0
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|+++|..-.+.|.+++++..... .....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 78 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDT 78 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45688888899999999999999999776643321 122345566678877665432 2444555555555444
No 111
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=81.49 E-value=9.5 Score=33.01 Aligned_cols=57 Identities=16% Similarity=0.204 Sum_probs=40.5
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
+...+++|++.+|. ++|.-|.+.+..|+.+|.+-++.+. .++.+++.++.+|++.+.
T Consensus 185 ~~~~~~~g~~VlV~-GaG~vG~~a~qla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi 241 (374)
T 2jhf_A 185 KVAKVTQGSTCAVF-GLGGVGLSVIMGCKAAGAARIIGVD--INKDKFAKAKEVGATECV 241 (374)
T ss_dssp TTTCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCSEEE
T ss_pred hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHhCCceEe
Confidence 45567788885555 4799999999999999985444442 235677778889986443
No 112
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=81.43 E-value=8.9 Score=31.76 Aligned_cols=73 Identities=12% Similarity=0.086 Sum_probs=48.5
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|....+.|.+++++..... .....+.++..|.++..+..+ .+.++..+.+++..++
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 356688888899999999999999999877765432 334455667777666554321 2455555555555544
No 113
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=81.36 E-value=8.5 Score=31.81 Aligned_cols=71 Identities=23% Similarity=0.033 Sum_probs=46.9
Q ss_pred CeEEEEeccCh--HHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcC--CEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTGGN--TGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALG--AEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ssGN--~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~G--a~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+|+ -|.++|..-.+.|.+++++.... ....++.++..+ ..++.++-. +.++..+.+++..++.
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEFNPAAVLPCDVI-SDQEIKDLFVELGKVW 101 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGGCCSEEEECCTT-CHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhcCCceEEEeecC-CHHHHHHHHHHHHHHc
Confidence 45577776677 99999999999999877766554 556666665443 344555543 5555566666665554
No 114
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=81.16 E-value=7 Score=33.69 Aligned_cols=59 Identities=27% Similarity=0.385 Sum_probs=41.8
Q ss_pred HHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 68 AEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 68 a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
+++...+++|++.+| .++|.-|.+.+..|+.+|.+-++.+. .++.+++.++.+|++.+.
T Consensus 163 al~~~~~~~g~~VlV-~GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi 221 (356)
T 1pl8_A 163 ACRRGGVTLGHKVLV-CGAGPIGMVTLLVAKAMGAAQVVVTD--LSATRLSKAKEIGADLVL 221 (356)
T ss_dssp HHHHHTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCSEEE
T ss_pred HHHhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHhCCCEEE
Confidence 334455677888555 45799999999999999994344332 346788889999997443
No 115
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=80.79 E-value=9.5 Score=31.18 Aligned_cols=74 Identities=16% Similarity=0.150 Sum_probs=48.4
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+|--|+++|..-.+.|.+++++..... .....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 456688888899999999999999999777654321 122344566677777665432 24455555556665554
No 116
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=80.74 E-value=11 Score=30.83 Aligned_cols=74 Identities=11% Similarity=0.136 Sum_probs=48.7
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+|--|+++|..-.+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 4566888888999999999999999998877554432 23355666677665544321 24455555555555544
No 117
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=80.73 E-value=13 Score=31.98 Aligned_cols=73 Identities=18% Similarity=0.203 Sum_probs=50.3
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--------HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHh
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--------MERRIVLRALGAEVYLADQA-GGFEGILRKGEEIL 147 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--------~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~ 147 (251)
|++.+|+..+|--|.++|....+.|.+++++...... ....+.++..|.++..+..+ .+.++..+.+++..
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~ 124 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAI 124 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 4566888888999999999999999998877644321 24566678888888766432 24455555555555
Q ss_pred hc
Q 025563 148 SN 149 (251)
Q Consensus 148 ~~ 149 (251)
++
T Consensus 125 ~~ 126 (346)
T 3kvo_A 125 KK 126 (346)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 118
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=80.48 E-value=8.4 Score=31.07 Aligned_cols=73 Identities=15% Similarity=0.124 Sum_probs=47.0
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|.-|.++|..-.+.|.+++++..... .....+.++..+.++..+..+ .+.++..+..++..++
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 355688888899999999999999999776643321 122345566678877666432 2444445555555443
No 119
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=80.43 E-value=9.2 Score=30.71 Aligned_cols=74 Identities=19% Similarity=0.117 Sum_probs=48.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+|--|.++|....+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3556888888999999999999999997776543222 23345566677777655432 24455555556665554
No 120
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=80.32 E-value=5 Score=33.67 Aligned_cols=55 Identities=25% Similarity=0.373 Sum_probs=40.4
Q ss_pred cCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 71 KGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
.+ +++|++.+|...+|..|.+.+..++.+|.+++++... +.+++.++.+|++.+.
T Consensus 121 ~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~~~ 175 (302)
T 1iz0_A 121 AQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR---PEKLALPLALGAEEAA 175 (302)
T ss_dssp TT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS---GGGSHHHHHTTCSEEE
T ss_pred hc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHhcCCCEEE
Confidence 55 7788885666656999999999999999976665532 3456667778987543
No 121
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=80.29 E-value=9.3 Score=31.88 Aligned_cols=73 Identities=18% Similarity=0.169 Sum_probs=48.1
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
|++.+|+..+|--|.++|..-.+.|.+++++..... .....+.++..|.+++.+..+ .+.++..+..++..++
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 355688888899999999999999998877664432 122344566778877665432 2445555555555444
No 122
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=80.18 E-value=5.6 Score=34.32 Aligned_cols=50 Identities=18% Similarity=0.165 Sum_probs=36.2
Q ss_pred CeEEEEeccChHHHHH-HHHH-HHCCCc-EEEEecCCCcHHHHHHHHHcCCEEE
Q 025563 78 KSVLIETTGGNTGIGL-AFIA-ALRGYK-LIIVMPSIASMERRIVLRALGAEVY 128 (251)
Q Consensus 78 ~~~vv~~ssGN~g~al-A~~a-~~~G~~-~~ivvp~~~~~~~~~~~~~~Ga~v~ 128 (251)
++ |+..++|.-|... +..| +.+|.+ ++++.+......+++.++.+||+.+
T Consensus 174 ~~-VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v 226 (357)
T 2b5w_A 174 SS-AFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV 226 (357)
T ss_dssp CE-EEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE
T ss_pred CE-EEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc
Confidence 66 4444459999998 8899 999998 6665544332337778889999876
No 123
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=79.66 E-value=14 Score=29.91 Aligned_cols=72 Identities=14% Similarity=0.083 Sum_probs=44.8
Q ss_pred CCeEEEEeccCh--HHHHHHHHHHHCCCcEEEEecCCCcHHHHHH-HHHcC---CEEEEeCCCCChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGN--TGIGLAFIAALRGYKLIIVMPSIASMERRIV-LRALG---AEVYLADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN--~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~-~~~~G---a~v~~v~~~~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|. -|.++|..-.+.|.+++++.........+.. .+.++ +.++.++-. +.++..+.++++.++
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVT-NDAEIETCFASIKEQ 84 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCS-SSHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCC-CHHHHHHHHHHHHHH
Confidence 355577777777 9999999999999998777554333333333 34444 345555544 445555555555554
No 124
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=79.63 E-value=10 Score=32.58 Aligned_cols=62 Identities=21% Similarity=0.123 Sum_probs=42.3
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHHHH----HcCCEEEEeC
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIVLR----ALGAEVYLAD 131 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~v~ 131 (251)
..|.+++|.+..+..-.+|.+++++.++.++|++++++.|+.- ++.-++.++ ..|+.+..+.
T Consensus 139 ~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 206 (307)
T 3tpf_A 139 WNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGY 206 (307)
T ss_dssp TTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 3455543555445555689999999999999999999999864 333333333 5677776665
No 125
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=79.58 E-value=9.6 Score=30.79 Aligned_cols=74 Identities=11% Similarity=0.201 Sum_probs=49.5
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC--CcHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI--ASMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~--~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+|--|.++|..-.+.|.++++..... ......+.++..+.++..+..+ .+.++..+..+++.++.
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 35567888889999999999999999987776332 2344566677777766555432 24555556666666654
No 126
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=79.50 E-value=6.9 Score=32.77 Aligned_cols=73 Identities=26% Similarity=0.118 Sum_probs=43.5
Q ss_pred CCeEEEEeccCh--HHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHH-HcC-CEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGN--TGIGLAFIAALRGYKLIIVMPSIASMERRIVLR-ALG-AEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN--~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~-~~G-a~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+|. -|+++|....+.|.+++++.........++.+. ..| +..+.++-. +.++..+.+++..++.
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVA-DAASIDAVFETLEKKW 107 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTT-CHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCC-CHHHHHHHHHHHHHhc
Confidence 355577877777 999999999999999776654322223333333 333 233334433 5555555666665554
No 127
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=79.50 E-value=34 Score=30.49 Aligned_cols=99 Identities=15% Similarity=0.028 Sum_probs=61.6
Q ss_pred CCCCCchhhHHHHHHHHHHHHcCCC-CCCCeEEEEeccChHHHHHHHHHHH-CCCcEEEEecCCCc-------------H
Q 025563 50 MEPCCSVKDRIALSMIKDAEEKGLI-TPGKSVLIETTGGNTGIGLAFIAAL-RGYKLIIVMPSIAS-------------M 114 (251)
Q Consensus 50 ~~ptGS~K~R~a~~~l~~a~~~g~~-~~g~~~vv~~ssGN~g~alA~~a~~-~G~~~~ivvp~~~~-------------~ 114 (251)
.+|.|.-+. ....+.....++.+ ..+++.+|+.+++-.|+|+|...+. .|.+++++-..... .
T Consensus 21 ~hp~gc~~~--v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~ 98 (405)
T 3zu3_A 21 AHPTGCEAN--VKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSA 98 (405)
T ss_dssp CCHHHHHHH--HHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHH
T ss_pred CCCHHHHHH--HHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHH
Confidence 456665443 34555566667766 4456667888888899999999888 99998776533211 1
Q ss_pred HHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 115 ERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 115 ~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
...+.++..|.++..+... .+.++..+...+..++.
T Consensus 99 ~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~ 135 (405)
T 3zu3_A 99 AFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDL 135 (405)
T ss_dssp HHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 1233567788777655432 24455555556666665
No 128
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=79.27 E-value=7.6 Score=33.59 Aligned_cols=51 Identities=16% Similarity=0.254 Sum_probs=38.0
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEE
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVY 128 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 128 (251)
|++.+|... |.-|.+++..++.+|.+++++........+++.++.+|++.+
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v 231 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY 231 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee
Confidence 777555555 999999999999999976666543323367778888999876
No 129
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=79.20 E-value=17 Score=29.82 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=26.1
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
++.+|+..+|--|+++|..-.+.|.+++++..
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r 59 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASR 59 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 45688888899999999998899998776643
No 130
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=79.07 E-value=4.5 Score=34.35 Aligned_cols=57 Identities=30% Similarity=0.363 Sum_probs=40.1
Q ss_pred HcCCCCCCC-eEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 70 EKGLITPGK-SVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 70 ~~g~~~~g~-~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
++..+++|+ +.+|...+|.-|.+++..|+.+|.+++++... +.+++.++.+|++.+.
T Consensus 142 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~---~~~~~~~~~lGa~~~i 199 (328)
T 1xa0_A 142 EEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK---AAEHDYLRVLGAKEVL 199 (328)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---TTCHHHHHHTTCSEEE
T ss_pred hhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHcCCcEEE
Confidence 334456664 64555556999999999999999986665543 3456677889997554
No 131
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=78.98 E-value=6.6 Score=32.41 Aligned_cols=73 Identities=18% Similarity=0.101 Sum_probs=47.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC---------cH----HHHHHHHHcCCEEEEeCCC-CChHHHHHH
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA---------SM----ERRIVLRALGAEVYLADQA-GGFEGILRK 142 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~---------~~----~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~ 142 (251)
+++.+|+..+|--|.++|....+.|.+++++-.... .. .....++..|.+++.+..+ .+.++..+.
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 89 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESF 89 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 356688888899999999999999999777654311 12 2344566778777665432 244555555
Q ss_pred HHHHhhc
Q 025563 143 GEEILSN 149 (251)
Q Consensus 143 a~~~~~~ 149 (251)
.++..++
T Consensus 90 ~~~~~~~ 96 (281)
T 3s55_A 90 VAEAEDT 96 (281)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5555444
No 132
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=78.93 E-value=9.8 Score=32.89 Aligned_cols=57 Identities=16% Similarity=0.253 Sum_probs=40.2
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
+...+++|++.+|. ++|.-|.+.+..|+.+|.+-++.+. .++.+++.++.+|++.+.
T Consensus 184 ~~~~~~~g~~VlV~-GaG~vG~~avqla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi 240 (373)
T 2fzw_A 184 NTAKLEPGSVCAVF-GLGGVGLAVIMGCKVAGASRIIGVD--INKDKFARAKEFGATECI 240 (373)
T ss_dssp TTTCCCTTCEEEEE-CCSHHHHHHHHHHHHHTCSEEEEEC--SCGGGHHHHHHHTCSEEE
T ss_pred hhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHcCCceEe
Confidence 45567788885555 5799999999999999985344332 234667778889986543
No 133
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=78.90 E-value=14 Score=30.32 Aligned_cols=73 Identities=16% Similarity=0.136 Sum_probs=49.0
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+|--|+++|..-.+.|.++++....... ....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 456888888999999999999999998886544432 23345667778777665432 24555555555555543
No 134
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=78.74 E-value=12 Score=30.71 Aligned_cols=74 Identities=23% Similarity=0.177 Sum_probs=45.9
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+|--|.++|....+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 3556888888999999999999999987776543211 22234456667766555332 24444444455554443
No 135
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=78.27 E-value=17 Score=29.20 Aligned_cols=71 Identities=21% Similarity=0.202 Sum_probs=44.3
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhh
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
+++.+|+..+|.-|+++|....+.|.+++++..... ....+.++..|.++..+..+ .+.++..+..++..+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA-PEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIS 78 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch-hHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 355688888899999999999999998777654321 22222556677776555332 234444444444443
No 136
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=78.24 E-value=12 Score=30.76 Aligned_cols=73 Identities=16% Similarity=0.254 Sum_probs=48.6
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
|++.+|+..+|--|+++|..-.+.|.++++....... ....+.++..|.+++.+..+ .+.++..+..++..++
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4566888888999999999999999998886644322 23355667778777665432 2445555555555544
No 137
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=78.07 E-value=14 Score=30.45 Aligned_cols=74 Identities=16% Similarity=0.153 Sum_probs=48.9
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
|++.+|+..+|--|+++|..-.+.|.++++...... .....+.++..|.++..+... .+.++..+..++..++.
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 456688888899999999999999999877654432 223355667778877665432 24455555555555443
No 138
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=77.95 E-value=16 Score=30.21 Aligned_cols=73 Identities=14% Similarity=0.154 Sum_probs=49.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC--------cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHh
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA--------SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEIL 147 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~--------~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~ 147 (251)
+++.+|+..+|--|+++|..-.+.|.+++++..... -....+.++..|.++..+..+ .+.++..+.+++..
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 88 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTV 88 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 356688888899999999999999998877764432 234455667778887766432 24455555555555
Q ss_pred hc
Q 025563 148 SN 149 (251)
Q Consensus 148 ~~ 149 (251)
++
T Consensus 89 ~~ 90 (285)
T 3sc4_A 89 EQ 90 (285)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 139
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=77.91 E-value=17 Score=29.30 Aligned_cols=70 Identities=16% Similarity=0.176 Sum_probs=41.8
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCc-EEEEecCCCcHHHHHHHHHc--CCEEEEe--CCCCCh-HHHHHHHHHHhh
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYK-LIIVMPSIASMERRIVLRAL--GAEVYLA--DQAGGF-EGILRKGEEILS 148 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~-~~ivvp~~~~~~~~~~~~~~--Ga~v~~v--~~~~~~-~~~~~~a~~~~~ 148 (251)
+++.+|+..+|--|.++|....+.|.+ ++++. .+.....++.++.. +.++..+ +-. +. ++..+..++..+
T Consensus 5 ~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~-r~~~~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~ 80 (254)
T 1sby_A 5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILD-RVENPTALAELKAINPKVNITFHTYDVT-VPVAESKKLLKKIFD 80 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEE-SSCCHHHHHHHHHHCTTSEEEEEECCTT-SCHHHHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCcEEEEEe-cCchHHHHHHHHHhCCCceEEEEEEecC-CChHHHHHHHHHHHH
Confidence 345688888899999999999999998 55544 33333444444443 4555444 433 32 344444444444
No 140
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=77.61 E-value=12 Score=30.17 Aligned_cols=72 Identities=17% Similarity=0.117 Sum_probs=44.5
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhh
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
+++.+|+..+|.-|.++|....+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..+
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHE 86 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 3556888888999999999999999987776543211 22344566667666554332 234444444444433
No 141
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=77.59 E-value=15 Score=29.84 Aligned_cols=73 Identities=12% Similarity=0.033 Sum_probs=45.5
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|.-|+++|..-.+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3566888888999999999999999987776543211 12234455567777555332 2444444444554443
No 142
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=77.49 E-value=7.6 Score=33.49 Aligned_cols=58 Identities=24% Similarity=0.250 Sum_probs=40.1
Q ss_pred HHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 68 AEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 68 a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
++.+..+++|++.+|.. +|.-|.+++..|+.+|.+++++... +.+++.++.+|++.+.
T Consensus 171 ~l~~~~~~~g~~VlV~G-aG~vG~~~~qlak~~Ga~Vi~~~~~---~~~~~~~~~lGa~~v~ 228 (360)
T 1piw_A 171 PLVRNGCGPGKKVGIVG-LGGIGSMGTLISKAMGAETYVISRS---SRKREDAMKMGADHYI 228 (360)
T ss_dssp HHHHTTCSTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESS---STTHHHHHHHTCSEEE
T ss_pred HHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHcCCCEEE
Confidence 34445577788745544 5999999999999999985554432 3456667778987554
No 143
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=77.47 E-value=17 Score=29.01 Aligned_cols=71 Identities=23% Similarity=0.175 Sum_probs=45.3
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecC-CCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhh
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPS-IAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~-~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
++.+|+..+|--|.+++..-.+.|.+++++... ... ....+.++..|.++..+..+ .+.++..+..++..+
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA 81 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 455888888999999999999999998777654 222 23345566667777665432 233444444444433
No 144
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=77.41 E-value=13 Score=30.58 Aligned_cols=73 Identities=12% Similarity=0.091 Sum_probs=45.4
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+|.-|+++|....+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 456888888999999999999999987776543211 12234555667666554321 24444444455555444
No 145
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=77.38 E-value=9 Score=27.89 Aligned_cols=49 Identities=27% Similarity=0.304 Sum_probs=38.2
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
++..+.|..|.++|......|.+++++-. ++.+.+.++..|.+++..+.
T Consensus 9 v~I~G~G~iG~~la~~L~~~g~~V~~id~---~~~~~~~~~~~~~~~~~gd~ 57 (141)
T 3llv_A 9 YIVIGSEAAGVGLVRELTAAGKKVLAVDK---SKEKIELLEDEGFDAVIADP 57 (141)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEECCT
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHHCCCcEEECCC
Confidence 66667799999999999999999887743 45677777777877766554
No 146
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=77.37 E-value=4.7 Score=34.28 Aligned_cols=57 Identities=28% Similarity=0.364 Sum_probs=39.9
Q ss_pred HcCCCCCCC-eEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 70 EKGLITPGK-SVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 70 ~~g~~~~g~-~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
.+..+++|+ +.+|...+|.-|.+.+..|+.+|.+++++.... .+++.++.+|++.+.
T Consensus 143 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~---~~~~~~~~lGa~~v~ 200 (330)
T 1tt7_A 143 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNR---EAADYLKQLGASEVI 200 (330)
T ss_dssp HHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSS---STHHHHHHHTCSEEE
T ss_pred HhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHcCCcEEE
Confidence 334456664 645665569999999999999999866665442 456667778987543
No 147
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=77.34 E-value=8.8 Score=33.35 Aligned_cols=58 Identities=24% Similarity=0.209 Sum_probs=40.5
Q ss_pred HHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEe
Q 025563 69 EEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLA 130 (251)
Q Consensus 69 ~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v 130 (251)
+.+..+++|++.+| .++|.-|.+.+..|+.+|.+++++.. ++.+++.++.+|++.+.-
T Consensus 187 l~~~~~~~g~~VlV-~GaG~vG~~aiqlak~~Ga~Vi~~~~---~~~~~~~a~~lGa~~vi~ 244 (369)
T 1uuf_A 187 LRHWQAGPGKKVGV-VGIGGLGHMGIKLAHAMGAHVVAFTT---SEAKREAAKALGADEVVN 244 (369)
T ss_dssp HHHTTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCEEEEEES---SGGGHHHHHHHTCSEEEE
T ss_pred HHhcCCCCCCEEEE-ECCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEec
Confidence 33345677888555 45688999999999999998544443 345667778899975543
No 148
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=77.27 E-value=13 Score=31.51 Aligned_cols=73 Identities=16% Similarity=0.213 Sum_probs=48.8
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecC-----------CCcHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHH
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPS-----------IASMERRIVLRALGAEVYLADQA-GGFEGILRKGE 144 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~-----------~~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~ 144 (251)
|++.+|+..+|--|.++|..-.+.|.+++++... .......+.++..|.++..+..+ .+.++..+..+
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 106 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQ 106 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 3556788888899999999999999988876432 11234456677788888776543 24445555555
Q ss_pred HHhhc
Q 025563 145 EILSN 149 (251)
Q Consensus 145 ~~~~~ 149 (251)
+..++
T Consensus 107 ~~~~~ 111 (322)
T 3qlj_A 107 TAVET 111 (322)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 149
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=77.06 E-value=8.1 Score=31.98 Aligned_cols=74 Identities=18% Similarity=0.100 Sum_probs=44.9
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+|.-|.++|....+.|.+++++..... .....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 119 (285)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence 356688888899999999998889998777432211 122234455567776555332 24444444445554443
No 150
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=77.01 E-value=12 Score=31.44 Aligned_cols=73 Identities=16% Similarity=0.187 Sum_probs=46.1
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
|++.+|+..+|--|.++|....+.|.+++++...... ....+.++..|.++..+..+ .+.++..+.+++..++
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 3566888888999999999999999987766543211 22344566667776554332 2444555555555444
No 151
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=76.99 E-value=11 Score=30.58 Aligned_cols=72 Identities=11% Similarity=0.105 Sum_probs=44.2
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc---HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS---MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~---~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|+++|....+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEK 78 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 455888888999999999988889987776543221 22334455567666555432 2444444444444443
No 152
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=76.88 E-value=12 Score=30.60 Aligned_cols=73 Identities=22% Similarity=0.181 Sum_probs=47.5
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|.-|.++|....+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..+++.++
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 29 GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 3556888888999999999999999998877654322 22344566777776655432 2444555555555444
No 153
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=76.83 E-value=16 Score=31.02 Aligned_cols=55 Identities=22% Similarity=0.271 Sum_probs=40.0
Q ss_pred CCCCCCeEEEEeccChHHHHHHHHHHHC-CCcEEEEecCCCcHHHHHHHHHcCCEEEEeC
Q 025563 73 LITPGKSVLIETTGGNTGIGLAFIAALR-GYKLIIVMPSIASMERRIVLRALGAEVYLAD 131 (251)
Q Consensus 73 ~~~~g~~~vv~~ssGN~g~alA~~a~~~-G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~ 131 (251)
.+++|++.+| .++|..|.+.+..|+.+ |.+++++ +.++.+++.++.+|++.+...
T Consensus 168 ~~~~g~~vlv-~GaG~vG~~a~qla~~~g~~~Vi~~---~~~~~~~~~~~~lGa~~~i~~ 223 (345)
T 3jv7_A 168 LLGPGSTAVV-IGVGGLGHVGIQILRAVSAARVIAV---DLDDDRLALAREVGADAAVKS 223 (345)
T ss_dssp GCCTTCEEEE-ECCSHHHHHHHHHHHHHCCCEEEEE---ESCHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCEEEE-ECCCHHHHHHHHHHHHcCCCEEEEE---cCCHHHHHHHHHcCCCEEEcC
Confidence 4667787444 45699999999999988 5555444 235788899999999865543
No 154
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=76.74 E-value=13 Score=30.27 Aligned_cols=73 Identities=21% Similarity=0.261 Sum_probs=47.6
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|..-.+.|.++++....+.. ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET 79 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3556888888999999999999999998886544322 23345566778777665432 2444455555555444
No 155
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=76.70 E-value=12 Score=30.85 Aligned_cols=71 Identities=24% Similarity=0.305 Sum_probs=45.0
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhh
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
++.+|+..+|--|+++|....+.|.+++++...... ....+.++..|.++..+..+ .+.++..+...+..+
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 455888888999999999999999987776544321 22245567778776555332 244444444444443
No 156
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=76.65 E-value=8.9 Score=32.87 Aligned_cols=59 Identities=20% Similarity=0.213 Sum_probs=42.7
Q ss_pred cCCCCCCCeEEEEecc---ChHHHHHHHHHHHC-CCcEEEEecCC--CcHHHHHHHHHcCCEEEEeC
Q 025563 71 KGLITPGKSVLIETTG---GNTGIGLAFIAALR-GYKLIIVMPSI--ASMERRIVLRALGAEVYLAD 131 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ss---GN~g~alA~~a~~~-G~~~~ivvp~~--~~~~~~~~~~~~Ga~v~~v~ 131 (251)
.|.++ |.+ |+..+. +|.+++++.+++++ |++++++.|+. .++.-++.++..|+++....
T Consensus 146 ~g~l~-glk-va~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 210 (306)
T 4ekn_B 146 IGRID-GIK-IAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 210 (306)
T ss_dssp HSCST-TCE-EEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred hCCcC-CCE-EEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEc
Confidence 35443 344 544444 68999999999999 99999999985 35556666777888876654
No 157
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=76.48 E-value=41 Score=29.92 Aligned_cols=99 Identities=13% Similarity=-0.026 Sum_probs=55.3
Q ss_pred CCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHH--HHHHHHHCCCcEEEEecCCCc-------------H
Q 025563 50 MEPCCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIG--LAFIAALRGYKLIIVMPSIAS-------------M 114 (251)
Q Consensus 50 ~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~a--lA~~a~~~G~~~~ivvp~~~~-------------~ 114 (251)
..|.|..+.. ...+.....++....+++.+|+.+++--|++ +|.+....|.+++++...... .
T Consensus 35 ~~p~g~~~~v--~~qi~y~~~~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~ 112 (418)
T 4eue_A 35 VHPYGCRREV--LNQIDYCKKAIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNI 112 (418)
T ss_dssp CCHHHHHHHH--HHHHHHHHHSCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHH
T ss_pred CCCccHHHHH--HHHHHHHhccCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHH
Confidence 3455544332 2223334456655666777777777778888 444444459888776543211 2
Q ss_pred HHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 115 ERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 115 ~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
...+.++..|.++..+... .+.++..+.++++.++.
T Consensus 113 ~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i~~~~ 149 (418)
T 4eue_A 113 FFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYIKDEF 149 (418)
T ss_dssp HHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 2334567778777655332 24455555566666665
No 158
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=76.30 E-value=7.9 Score=32.11 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=47.4
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|.++|..-.+.|.+++++...+.. ....+.++..|.++..+..+ .+.++..+.+++..++
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3556888888999999999999999998877643322 23345566778777665432 2444444455555444
No 159
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=76.26 E-value=9.5 Score=31.48 Aligned_cols=74 Identities=14% Similarity=0.137 Sum_probs=47.6
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
|++.+|+..+|--|+++|..-.+.|.+++++-.... .....+.++..|.++..+..+ .+.++..+.+++..++.
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 356688888899999999999999998665432211 123345566778887776542 24455555556665554
No 160
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=76.16 E-value=24 Score=28.83 Aligned_cols=70 Identities=11% Similarity=0.130 Sum_probs=43.4
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCC--EEEEeCCCCChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGA--EVYLADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga--~v~~v~~~~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|..-.+.|.+++++-......... .+.+|. ..+.++-. +.++..+..++..++
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~ 82 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGA--AASVGRGAVHHVVDLT-NEVSVRALIDFTIDT 82 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHH--HHHHCTTCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--HHHhCCCeEEEECCCC-CHHHHHHHHHHHHHH
Confidence 35668888889999999999999999877765443322222 222244 44555543 445555555555444
No 161
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=76.12 E-value=16 Score=30.20 Aligned_cols=69 Identities=13% Similarity=0.000 Sum_probs=45.3
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC-CcHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHH
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI-ASMERRIVLRALGAEVYLADQA-GGFEGILRKGEEI 146 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~ 146 (251)
++.+|+..+|--|+++|....+.|.+++++.... ......+.++..|.++..+..+ .+.++..+..++.
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 104 (275)
T 4imr_A 34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERA 104 (275)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 5568888889999999999999999887766432 3345566677778777665432 2333444444443
No 162
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=75.92 E-value=13 Score=30.21 Aligned_cols=72 Identities=11% Similarity=0.116 Sum_probs=45.5
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|.++|....+.|.+++++...... ....+.++..|.++..+..+ .+.++..+...+..++
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 556888888999999999999999997766433211 22345566678777665432 2444444444554443
No 163
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=75.90 E-value=15 Score=30.01 Aligned_cols=74 Identities=19% Similarity=0.088 Sum_probs=49.0
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHH----HHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASME----RRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~----~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..++--|+++|..-.+.|.+++++........ ..+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 11 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 11 NKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp TCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 356688888889999999999999999887754433322 344566668888666432 24555555556665554
No 164
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=75.88 E-value=15 Score=29.65 Aligned_cols=73 Identities=14% Similarity=0.145 Sum_probs=44.6
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+|.-|+++|..-.+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL 77 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 445888888999999999999999987776543211 12234455567666554321 24444444555554443
No 165
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=75.83 E-value=32 Score=28.30 Aligned_cols=73 Identities=12% Similarity=0.050 Sum_probs=41.7
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHc-CCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRAL-GAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~-Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+|--|+++|..-.+.|.++++.-..... ....+.++.. +.++..+..+ .+.++..+.+++..++.
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence 456888888999999999999999987665432211 1122233333 5556555432 23344444444444443
No 166
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=75.81 E-value=14 Score=29.72 Aligned_cols=72 Identities=21% Similarity=0.181 Sum_probs=44.1
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhh
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
+++.+|+..+|.-|+++|..-.+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 80 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVE 80 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3556888889999999999999999987776543211 12234455567666554321 244444444444443
No 167
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=75.79 E-value=15 Score=29.96 Aligned_cols=72 Identities=14% Similarity=0.124 Sum_probs=47.5
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|.-|.++|....+.|.++++....... ....+.++..|.++..+..+ .+.++..+.+++..++
T Consensus 27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 455888888999999999999999998776544322 23345566778887766432 2444455555555444
No 168
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=75.77 E-value=11 Score=30.79 Aligned_cols=73 Identities=10% Similarity=0.025 Sum_probs=46.9
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|..-.+.|.+++++-.... .....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 456688888899999999998899999776653321 123345567778777665432 2444444555555444
No 169
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=75.67 E-value=13 Score=30.26 Aligned_cols=72 Identities=19% Similarity=0.126 Sum_probs=47.3
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|.++|....+.|.++++....+.. ....+.++..|.++..+..+ .+.++..+.+++..++
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ 101 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 455888888999999999999999998777655432 23455666677666555432 2445555555555444
No 170
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=75.64 E-value=14 Score=30.44 Aligned_cols=73 Identities=16% Similarity=0.170 Sum_probs=47.7
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|..-.+.|.++++...... .....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 355678888899999999999999999887665332 223345567778777665432 2444455555555544
No 171
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=75.39 E-value=14 Score=29.80 Aligned_cols=72 Identities=17% Similarity=0.233 Sum_probs=47.4
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|.++|....+.|.++++....... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 455888888999999999999999998877654321 23345567778777655432 2445555555555444
No 172
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=75.37 E-value=6.4 Score=32.12 Aligned_cols=73 Identities=18% Similarity=0.222 Sum_probs=45.0
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|..-.+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3556788888999999999999999987765433211 22234455567676655332 2444555555555544
No 173
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=75.27 E-value=13 Score=30.80 Aligned_cols=72 Identities=14% Similarity=0.100 Sum_probs=46.2
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|+++|..-.+.|.+++++..... .....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45688888899999999999999998776653321 123345566677777665432 2444555555555444
No 174
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=75.23 E-value=33 Score=28.12 Aligned_cols=71 Identities=10% Similarity=0.130 Sum_probs=41.7
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcC-CEEEE--eCCCCCh-HHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALG-AEVYL--ADQAGGF-EGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~G-a~v~~--v~~~~~~-~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|.++|..-.+.|.+++++...... ...++.++..+ .++.. ++-. +. +...+.++++.++
T Consensus 13 k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVT-DPIATMSSLADFIKTH 88 (311)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTT-SCHHHHHHHHHHHHHH
T ss_pred cEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCC-CcHHHHHHHHHHHHHh
Confidence 455788888889999999988999987766543221 22344455443 34444 4433 33 3334444444443
No 175
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=75.20 E-value=24 Score=26.53 Aligned_cols=25 Identities=20% Similarity=0.202 Sum_probs=15.3
Q ss_pred HHhhHHHHHhhhhCCCCCEEEEecCch
Q 025563 168 HYETTGPEIWKDSGGDVDILVAGIGTG 194 (251)
Q Consensus 168 g~~t~~~EI~~q~~~~~d~vv~~vGtG 194 (251)
....+..++.++. +. |.+|.+.|+.
T Consensus 84 ~v~~~~~~i~~~~-G~-dVLVnnAgg~ 108 (157)
T 3gxh_A 84 DVEAFFAAMDQHK-GK-DVLVHCLANY 108 (157)
T ss_dssp HHHHHHHHHHHTT-TS-CEEEECSBSH
T ss_pred HHHHHHHHHHhcC-CC-CEEEECCCCC
Confidence 3344455555555 45 8999998753
No 176
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=75.18 E-value=16 Score=29.06 Aligned_cols=71 Identities=13% Similarity=0.167 Sum_probs=44.6
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhh
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
++.+|+..+|.-|.++|....+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..+
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMD 79 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 456888888999999999999999988777443322 23344566677776655432 233333334444433
No 177
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=75.03 E-value=22 Score=28.45 Aligned_cols=56 Identities=18% Similarity=0.164 Sum_probs=41.0
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~ 132 (251)
+++.+|+..+|--|.++|..-.+.|.+++++...... ....+.++..+.++..+..
T Consensus 7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (255)
T 3icc_A 7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEec
Confidence 4566788888889999999999999988886655432 2345567778888776643
No 178
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=74.89 E-value=17 Score=30.18 Aligned_cols=54 Identities=15% Similarity=0.062 Sum_probs=40.2
Q ss_pred eEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHHcCCEEEEeCC
Q 025563 79 SVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 79 ~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~v~~ 132 (251)
+.+|+..+|..|.+++......|.+++++..... ....+..++..|++++..+-
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl 67 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGEL 67 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCT
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecC
Confidence 3478888899999999999889999988876543 33444455667888877654
No 179
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=74.83 E-value=11 Score=30.57 Aligned_cols=53 Identities=15% Similarity=0.091 Sum_probs=36.8
Q ss_pred CeEEEEeccChHHHHHHHHHHHCC---CcEEEEecCCCcHHHHHHHHHcCCEEEEe
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRG---YKLIIVMPSIASMERRIVLRALGAEVYLA 130 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G---~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v 130 (251)
++.+|+..+|--|.++|....+.| .+++++.........++.+...+.++..+
T Consensus 22 k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~ 77 (267)
T 1sny_A 22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHIL 77 (267)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEE
T ss_pred CEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEE
Confidence 456888888999999999999999 88887765543333445554445555444
No 180
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=74.64 E-value=12 Score=30.97 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=39.3
Q ss_pred eEEEEeccChHHHHHHHHHHHCCCcEEEEecCC-C--cH-HHH---HHHHHcCCEEEEeCCC
Q 025563 79 SVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI-A--SM-ERR---IVLRALGAEVYLADQA 133 (251)
Q Consensus 79 ~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~-~--~~-~~~---~~~~~~Ga~v~~v~~~ 133 (251)
+.+|+..+|..|.+++......|.+++++.... . .+ .+. +.++..|++++..+-.
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~ 65 (307)
T 2gas_A 4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIN 65 (307)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTT
T ss_pred EEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCC
Confidence 357888889999999999888899988877543 1 12 333 3345578888877643
No 181
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=74.42 E-value=34 Score=27.91 Aligned_cols=45 Identities=7% Similarity=0.025 Sum_probs=33.1
Q ss_pred HHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhC----CCcEEEEEeCCC
Q 025563 173 GPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKN----PNIKVYGVEPTE 220 (251)
Q Consensus 173 ~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~----~~~~vigVep~~ 220 (251)
..+++++ .+.||+|||. +...+.|+..++++.+ .++.|+|.+-..
T Consensus 178 ~~~~l~~-~~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D~~~ 226 (294)
T 3qk7_A 178 ASRLLAL-EVPPTAIITD--CNMLGDGVASALDKAGLLGGEGISLIAYDGLP 226 (294)
T ss_dssp HHHHHHS-SSCCSEEEES--SHHHHHHHHHHHHHTTCSSTTSCEEEEETCSC
T ss_pred HHHHHcC-CCCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEeecCcc
Confidence 3445543 2578999974 6677789999999986 368999998654
No 182
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=74.28 E-value=18 Score=28.73 Aligned_cols=73 Identities=12% Similarity=0.111 Sum_probs=45.1
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcH--HHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASM--ERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~--~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+|--|+++|....+.|.++++....+... ...+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW 77 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 3457888889999999999999999988755443211 2233455567777665432 23344444445444443
No 183
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=74.21 E-value=10 Score=31.20 Aligned_cols=73 Identities=19% Similarity=0.166 Sum_probs=46.8
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC---------CcHH----HHHHHHHcCCEEEEeCCC-CChHHHHHH
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI---------ASME----RRIVLRALGAEVYLADQA-GGFEGILRK 142 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~---------~~~~----~~~~~~~~Ga~v~~v~~~-~~~~~~~~~ 142 (251)
|++.+|+..+|--|.++|..-.+.|.+++++-... .... ..+.++..|.+++.+..+ .+.++..+.
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 92 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAA 92 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 45668888889999999999999999987765331 1122 234456667777665432 244555555
Q ss_pred HHHHhhc
Q 025563 143 GEEILSN 149 (251)
Q Consensus 143 a~~~~~~ 149 (251)
+++..++
T Consensus 93 ~~~~~~~ 99 (278)
T 3sx2_A 93 LQAGLDE 99 (278)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
No 184
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=73.75 E-value=13 Score=31.10 Aligned_cols=73 Identities=18% Similarity=0.236 Sum_probs=47.3
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC---------CcH----HHHHHHHHcCCEEEEeCCC-CChHHHHHH
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI---------ASM----ERRIVLRALGAEVYLADQA-GGFEGILRK 142 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~---------~~~----~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~ 142 (251)
|++.+|+..++--|+++|..-.+.|.+++++-... ... ...+.++..|.++..+..+ .+.++..+.
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 107 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAA 107 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence 35668888889999999999999999988765321 012 2344567778777665432 244555555
Q ss_pred HHHHhhc
Q 025563 143 GEEILSN 149 (251)
Q Consensus 143 a~~~~~~ 149 (251)
.++..++
T Consensus 108 ~~~~~~~ 114 (299)
T 3t7c_A 108 VDDGVTQ 114 (299)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555444
No 185
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=73.67 E-value=14 Score=30.82 Aligned_cols=73 Identities=11% Similarity=0.053 Sum_probs=47.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC---cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA---SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~---~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
|++.+|+..+|--|+++|..-.+.|.++++...... .....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 355688888899999999999999998776643311 122344566778888777543 2444444445555444
No 186
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=73.54 E-value=15 Score=30.57 Aligned_cols=73 Identities=19% Similarity=0.165 Sum_probs=45.0
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEE--EeCCCCChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVY--LADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~--~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+|.-|+++|....+.|.+++++...... ....+.++..|.++. .++-. +.++..+..++..++.
T Consensus 34 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 34 GKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVT-DEDGIQAMVAQIESEV 109 (291)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTT-CHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCC-CHHHHHHHHHHHHHHc
Confidence 3556888888999999999999999987776543211 122344555665554 44433 4444444555555444
No 187
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=73.49 E-value=13 Score=32.33 Aligned_cols=60 Identities=18% Similarity=0.187 Sum_probs=41.2
Q ss_pred cCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHHH----HHcCCEEEEeC
Q 025563 71 KGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIVL----RALGAEVYLAD 131 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~~----~~~Ga~v~~v~ 131 (251)
.|.++ |.+..+..-.+|.+++++.+++++|++++++.|+.- ++.-++.+ +..|+++..+.
T Consensus 174 ~G~l~-glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~ 239 (340)
T 4ep1_A 174 TNTFK-GIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILH 239 (340)
T ss_dssp HSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEES
T ss_pred hCCCC-CCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 45443 445344445589999999999999999999999864 33333333 36788777665
No 188
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=73.28 E-value=14 Score=30.70 Aligned_cols=72 Identities=13% Similarity=0.078 Sum_probs=45.7
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|+++|..-.+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 456888888999999999999999987776543211 22344455567777655432 2444555555555444
No 189
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=73.26 E-value=21 Score=32.02 Aligned_cols=98 Identities=16% Similarity=0.074 Sum_probs=58.9
Q ss_pred CCCCchhhHHHHHHHHHHHHcCCC-CCCCeEEEEeccChHHHHHHHHHHH-CCCcEEEEecCCCc-H------------H
Q 025563 51 EPCCSVKDRIALSMIKDAEEKGLI-TPGKSVLIETTGGNTGIGLAFIAAL-RGYKLIIVMPSIAS-M------------E 115 (251)
Q Consensus 51 ~ptGS~K~R~a~~~l~~a~~~g~~-~~g~~~vv~~ssGN~g~alA~~a~~-~G~~~~ivvp~~~~-~------------~ 115 (251)
.|.|.++.- ...+....+++++ +.+++.+|+.+++--|+|+|...+. .|.+++++-..... . .
T Consensus 36 ~p~g~~~~v--~~qi~y~~~~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a 113 (422)
T 3s8m_A 36 HPLGCERNV--LEQIAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAA 113 (422)
T ss_dssp CHHHHHHHH--HHHHHHHHHTCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHH
T ss_pred CchhHHHHH--HHHHHHHhhccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHH
Confidence 344544432 2334455566666 3456678888888899999999888 99998876533211 1 1
Q ss_pred HHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 116 RRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 116 ~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
..+.++..|.++..+... .+.++..+...+..++.
T Consensus 114 ~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~ 149 (422)
T 3s8m_A 114 FDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEM 149 (422)
T ss_dssp HHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHS
T ss_pred HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 235677788777655432 24444445555555554
No 190
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=73.25 E-value=18 Score=30.54 Aligned_cols=55 Identities=20% Similarity=0.044 Sum_probs=41.3
Q ss_pred eEEEEeccChHHHHHHHHHHHCCCcEEEEecCC-CcHHHHH---HHHHcCCEEEEeCCC
Q 025563 79 SVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI-ASMERRI---VLRALGAEVYLADQA 133 (251)
Q Consensus 79 ~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~-~~~~~~~---~~~~~Ga~v~~v~~~ 133 (251)
+.+|+..+|..|.+++......|.+++++.... ..+.+.. .++..|++++..+-.
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~ 70 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLIN 70 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTT
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecC
Confidence 358888889999999999999999999888654 2334433 455678888877653
No 191
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=73.03 E-value=13 Score=30.61 Aligned_cols=74 Identities=15% Similarity=0.079 Sum_probs=46.9
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC----------CcHHH----HHHHHHcCCEEEEeCCC-CChHHHHH
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI----------ASMER----RIVLRALGAEVYLADQA-GGFEGILR 141 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~----------~~~~~----~~~~~~~Ga~v~~v~~~-~~~~~~~~ 141 (251)
|++.+|+..+|--|+++|..-.+.|.+++++-... .+..+ .+.++..|.+++.+..+ .+.++..+
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 94 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRE 94 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 35668888889999999999999999988765310 12222 34456677777665322 24455555
Q ss_pred HHHHHhhcC
Q 025563 142 KGEEILSNT 150 (251)
Q Consensus 142 ~a~~~~~~~ 150 (251)
..++..++.
T Consensus 95 ~~~~~~~~~ 103 (280)
T 3pgx_A 95 LVADGMEQF 103 (280)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 555554443
No 192
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=72.94 E-value=32 Score=27.56 Aligned_cols=68 Identities=24% Similarity=0.161 Sum_probs=44.4
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHH-HHHcCCEEEEeCCCCChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIV-LRALGAEVYLADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~-~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|+++|....+.|.+++++... ..+.+. .+..|++.+.++-. +.++..+..++..++
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~ 74 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIE---EGPLREAAEAVGAHPVVMDVA-DPASVERGFAEALAH 74 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTTCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCEEEEecCC-CHHHHHHHHHHHHHH
Confidence 456888888999999999999999988776543 233332 33447777777654 444444444444443
No 193
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=72.72 E-value=16 Score=31.49 Aligned_cols=60 Identities=13% Similarity=0.135 Sum_probs=41.9
Q ss_pred cCCCCCCCeEEEEecc--ChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHHHH----HcCCEEEEeCC
Q 025563 71 KGLITPGKSVLIETTG--GNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIVLR----ALGAEVYLADQ 132 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ss--GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~v~~ 132 (251)
.|.++ |.+ |+..+. +|.+++++.+++++|++++++.|+.- ++.-++.++ ..|+++..+..
T Consensus 162 ~g~l~-gl~-va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d 229 (325)
T 1vlv_A 162 FGRLK-GVK-VVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSN 229 (325)
T ss_dssp HSCST-TCE-EEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESC
T ss_pred hCCcC-CcE-EEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 45443 444 544444 59999999999999999999999863 333334343 77888877753
No 194
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=72.71 E-value=34 Score=27.16 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=25.7
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
+++.+|+..+|--|.++|..-.+.|.+++++..
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGR 46 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEec
Confidence 355688888899999999988888988666543
No 195
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=72.57 E-value=16 Score=31.37 Aligned_cols=60 Identities=20% Similarity=0.213 Sum_probs=41.9
Q ss_pred cCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHHHH----HcCCEEEEeC
Q 025563 71 KGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIVLR----ALGAEVYLAD 131 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~v~ 131 (251)
.|.++ |.+..+..-.+|.+++++.+++++|++++++.|+.- ++.-++.++ ..|+++..+.
T Consensus 150 ~g~l~-gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 215 (315)
T 1pvv_A 150 KGTIK-GVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLH 215 (315)
T ss_dssp HSCCT-TCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred hCCcC-CcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 45443 444333444499999999999999999999999864 333334343 7788887775
No 196
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=72.55 E-value=28 Score=29.91 Aligned_cols=52 Identities=21% Similarity=0.241 Sum_probs=38.6
Q ss_pred CCCeEEEEeccChHHHHHHHHHHH-CCCcEEEEecCCCcHHHHHHHHHcCCEEEEe
Q 025563 76 PGKSVLIETTGGNTGIGLAFIAAL-RGYKLIIVMPSIASMERRIVLRALGAEVYLA 130 (251)
Q Consensus 76 ~g~~~vv~~ssGN~g~alA~~a~~-~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v 130 (251)
+|++.+|...+|.-|.+.+..|+. .|.+++++. .++.+++.++.+|++.+.-
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~---~~~~~~~~~~~lGad~vi~ 223 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATA---SRPETQEWVKSLGAHHVID 223 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEEC---SSHHHHHHHHHTTCSEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEe---CCHHHHHHHHHcCCCEEEe
Confidence 677755666589999999999987 587765543 2467888889999976554
No 197
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=72.55 E-value=20 Score=29.28 Aligned_cols=73 Identities=12% Similarity=-0.029 Sum_probs=44.8
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|....+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 3566888888999999999999999987766543211 12234455567666554321 2444444444554443
No 198
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=72.39 E-value=34 Score=26.98 Aligned_cols=71 Identities=21% Similarity=0.230 Sum_probs=42.1
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHH-HcCCEEEEeCCC-CChHHHHHHHHHHhh
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLR-ALGAEVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~-~~Ga~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
++.+|+..+|.-|.++|....+.|.++++....... ....+.+. ..|.++..+..+ .+.++..+.+++..+
T Consensus 3 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 455888888999999999999999987666543211 11222232 567777665432 244444444444433
No 199
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=72.35 E-value=22 Score=28.65 Aligned_cols=70 Identities=14% Similarity=0.090 Sum_probs=39.1
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE--eCCCCChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL--ADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~--v~~~~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|.++|..-.+.|.+++++......... ..+.++.++.. ++-. +.++..+..++..++
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~ 78 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEE--PAAELGAAVRFRNADVT-NEADATAALAFAKQE 78 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--HHHHhCCceEEEEccCC-CHHHHHHHHHHHHHH
Confidence 3566888888999999999999999998776544322111 12223544444 4433 445555555555444
No 200
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=72.23 E-value=17 Score=31.15 Aligned_cols=60 Identities=20% Similarity=0.199 Sum_probs=42.1
Q ss_pred HcCCCCCCCeEEEEecc--ChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHHHH----HcCCEEEEeC
Q 025563 70 EKGLITPGKSVLIETTG--GNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIVLR----ALGAEVYLAD 131 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ss--GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~v~ 131 (251)
..|.++ |.+ |...+. +|.+++++.+++++|++++++.|+.- ++.-++.++ ..|+++..+.
T Consensus 142 ~~g~l~-gl~-va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 209 (307)
T 2i6u_A 142 RKGALR-GLR-LSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTA 209 (307)
T ss_dssp HHSCCT-TCE-EEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCcC-CeE-EEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 345443 444 555554 59999999999999999999999864 333333333 7788887775
No 201
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=72.11 E-value=18 Score=30.25 Aligned_cols=71 Identities=13% Similarity=0.138 Sum_probs=47.3
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHH-HHHHHHcCCEEEEeCC-CCChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMER-RIVLRALGAEVYLADQ-AGGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~-~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~~~~~~ 150 (251)
|++.+|+.+++--|+++|..-.+.|.++++.-. + .++ .+..+.+|.+++.+.. ..+.++..+..++..++.
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r-~--~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGR-R--KDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-C--HHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC-C--HHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 466688898899999999999999998776543 2 233 3345566766654432 135566666666666655
No 202
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=72.10 E-value=12 Score=30.25 Aligned_cols=70 Identities=23% Similarity=0.157 Sum_probs=42.6
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHH-HHHcCC--EEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIV-LRALGA--EVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~-~~~~Ga--~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
|++.+|+..+|--|+++|..-.+.|.+++++... ..+.+. .+.++. ..+.++-. +.++..+..++..++.
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~~ 81 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATS---ESGAQAISDYLGDNGKGMALNVT-NPESIEAVLKAITDEF 81 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHGGGEEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhcccceEEEEeCC-CHHHHHHHHHHHHHHc
Confidence 4566888888999999999999999997776433 222222 222333 44445543 4555555555555543
No 203
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=72.07 E-value=37 Score=27.39 Aligned_cols=72 Identities=21% Similarity=0.082 Sum_probs=45.0
Q ss_pred CeEEEEecc--ChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHH-cC-CEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTG--GNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRA-LG-AEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ss--GN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~-~G-a~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+ |--|+++|....+.|.+++++.........++.+.. .| ..++.++-. +.++..+..++..++.
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVA-EDASIDTMFAELGKVW 85 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCC-CHHHHHHHHHHHHHHc
Confidence 455777776 789999999999999998777644333344454443 23 344555543 4455555556665554
No 204
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=72.04 E-value=37 Score=27.31 Aligned_cols=69 Identities=7% Similarity=-0.032 Sum_probs=37.9
Q ss_pred CeEEEEeccChHHHHHHHHHHHCC--CcEEEEecCCCcHHHHH-HHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRG--YKLIIVMPSIASMERRI-VLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G--~~~~ivvp~~~~~~~~~-~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|+++|..-.+.| ..++++. .+ ..+.+ ..+.+|.++..+..+ .+.++..+..++..++
T Consensus 3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~-r~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (254)
T 3kzv_A 3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVA-RS--EAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKG 75 (254)
T ss_dssp CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEE-SC--HHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCCeEEEEec-CC--HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 455788888888999988776665 4444332 22 23322 233446565554321 2445555555555444
No 205
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=71.94 E-value=18 Score=29.39 Aligned_cols=73 Identities=19% Similarity=0.264 Sum_probs=44.6
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|.-|+++|..-.+.|.+++++...... ....+.++..|.++..+..+ .+.++..+...+..++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3556888888999999999999999987776533211 12234455567666554321 2444444444444443
No 206
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=71.82 E-value=9.9 Score=32.05 Aligned_cols=49 Identities=22% Similarity=0.311 Sum_probs=37.1
Q ss_pred eEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEe
Q 025563 79 SVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLA 130 (251)
Q Consensus 79 ~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v 130 (251)
..+|...+|..|.+.+..|+.+|.+++++... +.+++.++.+|++-+.-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~vi~ 197 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGR---ESTHGYLKSLGANRILS 197 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---GGGHHHHHHHTCSEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCCEEEe
Confidence 33555556999999999999999987776543 45777888899976543
No 207
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=71.76 E-value=17 Score=29.15 Aligned_cols=68 Identities=16% Similarity=0.090 Sum_probs=40.9
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHH-HHHc--CCEEEEeCCCCChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIV-LRAL--GAEVYLADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~-~~~~--Ga~v~~v~~~~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|+++|....+.|.+++++.... .+.+. .+.+ ++..+.++-. +.++..+..++..++
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~ 74 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRY---QRLQQQELLLGNAVIGIVADLA-HHEDVDVAFAAAVEW 74 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHGGGEEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHhcCCceEEECCCC-CHHHHHHHHHHHHHh
Confidence 4558888889999999999999999877664332 22222 2222 3344444443 445555555555443
No 208
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=71.72 E-value=19 Score=30.84 Aligned_cols=61 Identities=23% Similarity=0.184 Sum_probs=44.7
Q ss_pred HcCCCCCCCeEEEEecc---ChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHHHHHcCCEEEEeCC
Q 025563 70 EKGLITPGKSVLIETTG---GNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ss---GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~v~~ 132 (251)
..|.++ |.+ |+..+. +|.+++++.++.++|++++++.|+.- ++..++.++..|+++..+..
T Consensus 149 ~~g~l~-gl~-va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d 214 (308)
T 1ml4_A 149 EFGRID-GLK-IGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTT 214 (308)
T ss_dssp HSSCSS-SEE-EEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESC
T ss_pred HhCCCC-CeE-EEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcC
Confidence 345543 344 555555 58999999999999999999999854 44456677788988777653
No 209
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=71.71 E-value=39 Score=27.48 Aligned_cols=72 Identities=18% Similarity=0.086 Sum_probs=46.4
Q ss_pred CeEEEEecc--ChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHH-cC-CEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTG--GNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRA-LG-AEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ss--GN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~-~G-a~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+ |--|+++|....+.|.+++++.........++.++. .| ..++.++-. +.++..+.+++..++.
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVS-KEEHFKSLYNSVKKDL 82 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 455777776 889999999999999997777654333445555543 34 455555544 4555555556665554
No 210
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=71.71 E-value=31 Score=27.66 Aligned_cols=69 Identities=14% Similarity=0.094 Sum_probs=42.1
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEe--CCCCChHHHHHHHHHHhh
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLA--DQAGGFEGILRKGEEILS 148 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v--~~~~~~~~~~~~a~~~~~ 148 (251)
+++.+|+..+|.-|.++|..-.+.|.+++++......... ..+.++.++..+ +-. +.++..+..++..+
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA--QAKKLGNNCVFAPADVT-SEKDVQTALALAKG 82 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH--HHHHHCTTEEEEECCTT-CHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHH--HHHHhCCceEEEEcCCC-CHHHHHHHHHHHHH
Confidence 3566888888999999999999999998777654332222 222335555444 432 34444444444443
No 211
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=71.62 E-value=19 Score=29.21 Aligned_cols=71 Identities=21% Similarity=0.214 Sum_probs=44.0
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEe--CCCCChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLA--DQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v--~~~~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+|--|.++|..-.+.|.+++++-... ....+..+.++.++..+ +-. +.++..+..++..++.
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDI--ERARQAAAEIGPAAYAVQMDVT-RQDSIDAAIAATVEHA 80 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHCTTEEEEECCTT-CHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHhCCCceEEEeeCC-CHHHHHHHHHHHHHHc
Confidence 35568888889999999999999999877664321 22222334445555444 433 4455555556665554
No 212
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=71.38 E-value=15 Score=30.31 Aligned_cols=73 Identities=14% Similarity=0.172 Sum_probs=46.7
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecC-------------CCcHHH----HHHHHHcCCEEEEeCCC-CChHH
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPS-------------IASMER----RIVLRALGAEVYLADQA-GGFEG 138 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~-------------~~~~~~----~~~~~~~Ga~v~~v~~~-~~~~~ 138 (251)
|++.+|+..+|--|.++|..-.+.|.+++++-.. .....+ .+.++..|.+++.+..+ .+.++
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 90 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDA 90 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHH
Confidence 4566888888999999999999999998776432 111233 33455667777665432 24455
Q ss_pred HHHHHHHHhhc
Q 025563 139 ILRKGEEILSN 149 (251)
Q Consensus 139 ~~~~a~~~~~~ 149 (251)
..+.+++..++
T Consensus 91 v~~~~~~~~~~ 101 (286)
T 3uve_A 91 LKAAVDSGVEQ 101 (286)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555555544
No 213
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=71.16 E-value=21 Score=29.27 Aligned_cols=73 Identities=19% Similarity=0.179 Sum_probs=46.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHHcCC---EEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRALGA---EVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga---~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|.++|..-.+.|.+++++..... .....+.++..|. ++..+..+ .+.++..+..++..++
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 356688888899999999999999998777643321 1233455666665 66555332 2445555555555443
No 214
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=71.15 E-value=15 Score=30.05 Aligned_cols=73 Identities=16% Similarity=0.181 Sum_probs=46.6
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC---------cHH----HHHHHHHcCCEEEEeCCC-CChHHHHHH
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA---------SME----RRIVLRALGAEVYLADQA-GGFEGILRK 142 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~---------~~~----~~~~~~~~Ga~v~~v~~~-~~~~~~~~~ 142 (251)
|++.+|+..+|--|+++|..-.+.|.+++++-.... ... ....++..|.++..+..+ .+.++..+.
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 89 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRE 89 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 456688888899999999999999999877653310 122 233456677777665432 244555555
Q ss_pred HHHHhhc
Q 025563 143 GEEILSN 149 (251)
Q Consensus 143 a~~~~~~ 149 (251)
+++..++
T Consensus 90 ~~~~~~~ 96 (287)
T 3pxx_A 90 LANAVAE 96 (287)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
No 215
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=71.01 E-value=17 Score=29.86 Aligned_cols=74 Identities=18% Similarity=0.161 Sum_probs=47.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC----------CcHH----HHHHHHHcCCEEEEeCCC-CChHHHHH
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI----------ASME----RRIVLRALGAEVYLADQA-GGFEGILR 141 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~----------~~~~----~~~~~~~~Ga~v~~v~~~-~~~~~~~~ 141 (251)
+++.+|+..+|--|.++|..-.+.|.+++++-... .... ..+.++..|.+++.+..+ .+.++..+
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 90 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRK 90 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 45668888889999999999999999988764311 1222 234456677777655322 25555555
Q ss_pred HHHHHhhcC
Q 025563 142 KGEEILSNT 150 (251)
Q Consensus 142 ~a~~~~~~~ 150 (251)
.+++..++.
T Consensus 91 ~~~~~~~~~ 99 (277)
T 3tsc_A 91 VVDDGVAAL 99 (277)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 555555443
No 216
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=71.00 E-value=36 Score=26.71 Aligned_cols=50 Identities=24% Similarity=0.192 Sum_probs=36.5
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHH-HcCCEEEEeCCC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLR-ALGAEVYLADQA 133 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~-~~Ga~v~~v~~~ 133 (251)
++..+.|+.|..+|......|.+++++- .++.+.+.+. ..|.+++.-+..
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid---~~~~~~~~l~~~~~~~~i~gd~~ 53 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIIN---KDRELCEEFAKKLKATIIHGDGS 53 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEE---SCHHHHHHHHHHSSSEEEESCTT
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEE---CCHHHHHHHHHHcCCeEEEcCCC
Confidence 5566679999999999999999988774 2355665543 468877666543
No 217
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=70.97 E-value=39 Score=27.19 Aligned_cols=32 Identities=31% Similarity=0.337 Sum_probs=23.4
Q ss_pred CeEEEEeccC-hHHHHHHHHHHHCCCcEEEEec
Q 025563 78 KSVLIETTGG-NTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 78 ~~~vv~~ssG-N~g~alA~~a~~~G~~~~ivvp 109 (251)
++.+|+..+| --|.++|....+.|.+++++..
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r 55 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDY 55 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecC
Confidence 4446665556 5999999999999998766543
No 218
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=70.95 E-value=19 Score=28.99 Aligned_cols=72 Identities=14% Similarity=0.119 Sum_probs=44.7
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|.-|.++|..-.+.|.+++++...... ....+.++..+.++..+..+ .+.++..+..++..++
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 455888888999999999999999987776542221 12234456667777655432 2344444444444443
No 219
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=70.83 E-value=18 Score=29.30 Aligned_cols=72 Identities=21% Similarity=0.219 Sum_probs=44.9
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|.-|.++|....+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 456888888999999999999999988776653321 12234566678777655432 2333444444444443
No 220
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=70.68 E-value=15 Score=29.32 Aligned_cols=70 Identities=13% Similarity=0.161 Sum_probs=42.9
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHh
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEIL 147 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~ 147 (251)
++.+|+..+|.-|++++..-.+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 83 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAI 83 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 456888888999999999999999987776543211 12234556667776655432 23333344444443
No 221
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=70.39 E-value=14 Score=31.73 Aligned_cols=59 Identities=17% Similarity=0.123 Sum_probs=43.1
Q ss_pred cCCCCCCCeEEEEecc---ChHHHHHHHHHHHC-CCcEEEEecCCC--cHHHHHHHHHcCCEEEEeC
Q 025563 71 KGLITPGKSVLIETTG---GNTGIGLAFIAALR-GYKLIIVMPSIA--SMERRIVLRALGAEVYLAD 131 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ss---GN~g~alA~~a~~~-G~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~v~ 131 (251)
.|.++ |.+ |+..+. +|.+++++.++.++ |++++++.|+.- ++..++.++..|+++..+.
T Consensus 149 ~g~l~-gl~-va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (310)
T 3csu_A 149 QGRLD-NLH-VAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHS 213 (310)
T ss_dssp HSCSS-SCE-EEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECS
T ss_pred hCCcC-CcE-EEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEc
Confidence 45543 444 555555 68999999999999 999999999854 4445566777888876654
No 222
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=70.39 E-value=19 Score=29.06 Aligned_cols=72 Identities=17% Similarity=0.113 Sum_probs=43.8
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhh
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
+++.+|+..+|.-|+++|....+.|.+++++...... ....+.++..|.++..+... .+.++..+..++..+
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN 87 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3566888888999999999999999987776543211 12234455667666544321 234444444444433
No 223
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=70.23 E-value=20 Score=29.33 Aligned_cols=73 Identities=18% Similarity=0.249 Sum_probs=43.5
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHH-HHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVL-RALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~-~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|.-|+++|....+.|.+++++...... ....+.+ +..|.++..+... .+.++..+..++..++
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4566888888999999999999999987776543211 1122233 4457766554321 2444444444444443
No 224
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=70.12 E-value=33 Score=28.16 Aligned_cols=72 Identities=19% Similarity=0.092 Sum_probs=44.6
Q ss_pred CeEEEEecc--ChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHH-cC-CEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTG--GNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRA-LG-AEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ss--GN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~-~G-a~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+ |--|+++|....+.|.+++++.........++.++. .| ...+.++-. +.++..+.+++..++.
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVS-LDEDIKNLKKFLEENW 97 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 455777766 789999999999999998777644323344455543 33 445555543 4455555555555544
No 225
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=70.10 E-value=18 Score=28.98 Aligned_cols=72 Identities=14% Similarity=0.166 Sum_probs=44.5
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|+++|..-.+.|.+++++...+.. ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 455888888999999999999999998777652321 12234456667666554321 2444444444444443
No 226
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=70.09 E-value=17 Score=31.46 Aligned_cols=54 Identities=24% Similarity=0.295 Sum_probs=39.3
Q ss_pred CCeEEEEecc--ChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHHHH----HcCCEEEEeC
Q 025563 77 GKSVLIETTG--GNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIVLR----ALGAEVYLAD 131 (251)
Q Consensus 77 g~~~vv~~ss--GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~v~ 131 (251)
|.+ |+..+. .|.+++++.+++++|++++++.|+.- ++.-++.++ ..|+++..+.
T Consensus 155 gl~-ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 216 (333)
T 1duv_G 155 EMT-LVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTE 216 (333)
T ss_dssp GCE-EEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEES
T ss_pred CcE-EEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 344 555554 59999999999999999999999853 333334343 7888887775
No 227
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=70.04 E-value=18 Score=29.28 Aligned_cols=73 Identities=19% Similarity=0.175 Sum_probs=47.1
Q ss_pred CeEEEEecc--ChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHH-HHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTG--GNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVL-RALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ss--GN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~-~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+ +--|.++|....+.|.+++++...... ...++.+ +.+|.++..+..+ .+.++..+.++++.++.
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF 99 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 455777766 679999999999999998877655433 2344444 3457777766532 24555555566665554
No 228
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=69.95 E-value=43 Score=27.23 Aligned_cols=147 Identities=14% Similarity=0.041 Sum_probs=75.7
Q ss_pred HHHHHHHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecC--C------C-----cH-----HHHHHHHHcC
Q 025563 63 SMIKDAEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPS--I------A-----SM-----ERRIVLRALG 124 (251)
Q Consensus 63 ~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~--~------~-----~~-----~~~~~~~~~G 124 (251)
..+..+..++. .-.++.....+........++..|+|++.+-.. . . .. .-.+.+...|
T Consensus 52 ~~i~~l~~~~v----dgiii~~~~~~~~~~~~~~~~~~giPvV~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~g 127 (297)
T 3rot_A 52 QFIESALATYP----SGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEKALELT 127 (297)
T ss_dssp HHHHHHHHTCC----SEEEECCCCSSTTHHHHHHHHHHTCCEEEESCCCSCTTTSCCSCEEECCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCC----CEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcCCCccccccCcceEEccChHHHHHHHHHHHHHhc
Confidence 44555556654 222333333333234444566779998876422 1 0 01 1123333344
Q ss_pred ---CEEEEeCCCCCh---HHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHH
Q 025563 125 ---AEVYLADQAGGF---EGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVT 198 (251)
Q Consensus 125 ---a~v~~v~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~ 198 (251)
-+|..+.+..+. .++.+-.++..+++ +.-+.....+ ...+.++. ...+++++- +++|+|||. +...+.
T Consensus 128 ~~~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~-g~~~~~~~~~-~~~~~~~~-~~~~~l~~~-~~~~ai~~~--~d~~A~ 201 (297)
T 3rot_A 128 PSAKRALVLNPQPGHIGLEKRAYGIKTILQDK-GIFFEELDVG-TDPNQVQS-RVKSYFKIH-PETNIIFCL--TSQALD 201 (297)
T ss_dssp TTCCEEEEEESCTTCHHHHHHHHHHHHHHHHT-TCEEEEEECC-SCHHHHHH-HHHHHHHHC-TTCCEEEES--SHHHHH
T ss_pred CCCceEEEEeCCCCcHHHHHHHHHHHHHHHhc-CCeEEEeecC-CChHHHHH-HHHHHHHhC-CCCCEEEEc--CCcchH
Confidence 466666433222 23334444555554 3322211111 22333433 344555543 578999874 466778
Q ss_pred HHHHHHHhhC-----CCcEEEEEeCC
Q 025563 199 GSGRFLKEKN-----PNIKVYGVEPT 219 (251)
Q Consensus 199 Gi~~~~~~~~-----~~~~vigVep~ 219 (251)
|+..++++.+ .++.|+|.+-.
T Consensus 202 g~~~al~~~g~~vP~~dv~vig~D~~ 227 (297)
T 3rot_A 202 PLGQMLLHPDRYDFNYQPQVYSFDKT 227 (297)
T ss_dssp HHHHHHHSHHHHTCCCCCEEEEECCC
T ss_pred HHHHHHHhcCCccCCCceEEEEeCCC
Confidence 9999999875 37999999864
No 229
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=69.35 E-value=20 Score=28.94 Aligned_cols=70 Identities=26% Similarity=0.230 Sum_probs=43.0
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHH-HHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRI-VLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~-~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|....+.|.+++++... ..+.+ ..+.++.++..+..+ .+.++..+..++..++
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD---KAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 3556888888999999999999999987666432 22222 233456665554322 2445555555555444
No 230
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=69.30 E-value=5.3 Score=31.14 Aligned_cols=27 Identities=15% Similarity=0.181 Sum_probs=25.2
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEE
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIV 107 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~iv 107 (251)
|+.-++|-.|.++|...++.|++++||
T Consensus 5 V~IIGaGpaGL~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 5 IAIIGTGIAGLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEE
Confidence 778889999999999999999998887
No 231
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=69.24 E-value=41 Score=26.72 Aligned_cols=149 Identities=11% Similarity=0.050 Sum_probs=80.1
Q ss_pred HHHHHHHHcC-CCCCCCeEEEEecc-ChHHHHHHHHHHHCCCcEEEEecCC-----Cc-----H-----HHHHHHHHc--
Q 025563 63 SMIKDAEEKG-LITPGKSVLIETTG-GNTGIGLAFIAALRGYKLIIVMPSI-----AS-----M-----ERRIVLRAL-- 123 (251)
Q Consensus 63 ~~l~~a~~~g-~~~~g~~~vv~~ss-GN~g~alA~~a~~~G~~~~ivvp~~-----~~-----~-----~~~~~~~~~-- 123 (251)
..+..+.+++ . .- +|.... ..........++..|+|++.+-... .+ . .-.+.+...
T Consensus 49 ~~i~~l~~~~~v----dg-ii~~~~~~~~~~~~~~~~~~~~ipvV~~~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~~ 123 (276)
T 3ksm_A 49 QILSYHLSQAPP----DA-LILAPNSAEDLTPSVAQYRARNIPVLVVDSDLAGDAHQGLVATDNYAAGQLAARALLATLD 123 (276)
T ss_dssp HHHHHHHHHSCC----SE-EEECCSSTTTTHHHHHHHHHTTCCEEEESSCCSSSCSSEEEECCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhCCC----CE-EEEeCCCHHHHHHHHHHHHHCCCcEEEEecCCCCCCcceEEccCHHHHHHHHHHHHHHhcC
Confidence 4455555665 3 22 444442 2333444455677899988774211 01 1 123333333
Q ss_pred --CC-EEEEeCCCCCh---HHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHH
Q 025563 124 --GA-EVYLADQAGGF---EGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTV 197 (251)
Q Consensus 124 --Ga-~v~~v~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~ 197 (251)
|- +|..+.+..+. .++.+-.++..+++++.-+..........+.++. ...+++++- +++|+|||. +...+
T Consensus 124 ~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~~ai~~~--~d~~a 199 (276)
T 3ksm_A 124 LSKERNIALLRLRAGNASTDQREQGFLDVLRKHDKIRIIAAPYAGDDRGAARS-EMLRLLKET-PTIDGLFTP--NESTT 199 (276)
T ss_dssp TTSCEEEEECBCCTTCHHHHHHHHHHHHHHTTCTTEEEEECCBCCSSHHHHHH-HHHHHHHHC-SCCCEEECC--SHHHH
T ss_pred cCCCceEEEEEcCCCchhHHHHHHHHHHHHHhCCCcEEEEEecCCCcHHHHHH-HHHHHHHhC-CCceEEEEC--Cchhh
Confidence 43 56666543222 2344444555565545433222222233333444 344555543 578999875 56677
Q ss_pred HHHHHHHHhhC--CCcEEEEEeCCC
Q 025563 198 TGSGRFLKEKN--PNIKVYGVEPTE 220 (251)
Q Consensus 198 ~Gi~~~~~~~~--~~~~vigVep~~ 220 (251)
.|+..++++.+ .++.|+|.+...
T Consensus 200 ~g~~~al~~~g~p~di~vig~d~~~ 224 (276)
T 3ksm_A 200 IGALVAIRQSGMSKQFGFIGFDQTE 224 (276)
T ss_dssp HHHHHHHHHTTCTTSSEEEEESCCH
T ss_pred hHHHHHHHHcCCCCCeEEEEeCCCH
Confidence 89999999886 469999998654
No 232
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=69.02 E-value=20 Score=29.97 Aligned_cols=72 Identities=19% Similarity=0.189 Sum_probs=46.0
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHHcC-CEEEEe--CCCCChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRALG-AEVYLA--DQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~~G-a~v~~v--~~~~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|.++|..-.+.|.+++++..... .....+.++..| .++..+ +-. +.++..+.+++..++
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVS-DPGSCADAARTVVDA 116 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCC-CHHHHHHHHHHHHHH
Confidence 355688888899999999999999998877764432 234455566666 455444 432 445555555555444
No 233
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=68.92 E-value=20 Score=28.98 Aligned_cols=72 Identities=13% Similarity=0.095 Sum_probs=43.8
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhh
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
+++.+|+..+|--|+++|..-.+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..+
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (260)
T 2qq5_A 5 GQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDR 78 (260)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 3556888888999999999999999987766533211 12234455557776655432 244444444444443
No 234
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=68.81 E-value=13 Score=29.49 Aligned_cols=52 Identities=21% Similarity=0.223 Sum_probs=39.7
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCC-EEEEeCC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGA-EVYLADQ 132 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga-~v~~v~~ 132 (251)
++.+|+..+|.-|.+++......|.+++++.... .+...+...+. +++..+-
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~---~~~~~~~~~~~~~~~~~Dl 74 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE---EQGPELRERGASDIVVANL 74 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG---GGHHHHHHTTCSEEEECCT
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh---HHHHHHHhCCCceEEEccc
Confidence 4568888889999999999999999988887543 23444555688 8777664
No 235
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=68.69 E-value=29 Score=28.49 Aligned_cols=70 Identities=10% Similarity=0.079 Sum_probs=47.3
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+.+++--|+++|..-.+.|.++++.- .++.+.+.+...+.++..+..+ .+.++..+..++..++.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 73 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFID---IDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3558888889999999999999999877653 2355666666666666554322 24555555555555554
No 236
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=68.61 E-value=19 Score=28.96 Aligned_cols=72 Identities=10% Similarity=0.044 Sum_probs=43.7
Q ss_pred CCeEEEEeccChHHHHHHHHHHH-CCCcEEEEecCCC-cHHHHHHHHHcCCEEE--EeCCCCChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAAL-RGYKLIIVMPSIA-SMERRIVLRALGAEVY--LADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~-~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~--~v~~~~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|.++|..-.. .|.+++++..... .....+.++..|.++. .++-. +.++..+..+++.++
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID-DLQSIRALRDFLRKE 79 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCC-CHHHHHHHHHHHHHh
Confidence 35568888889999999998888 8998777654321 1223444555565554 44433 444444445555444
No 237
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=68.43 E-value=47 Score=27.10 Aligned_cols=36 Identities=8% Similarity=-0.026 Sum_probs=29.0
Q ss_pred CCCCEEEEecCchhHHHHHHHHHHhhC----CCcEEEEEeCC
Q 025563 182 GDVDILVAGIGTGGTVTGSGRFLKEKN----PNIKVYGVEPT 219 (251)
Q Consensus 182 ~~~d~vv~~vGtGg~~~Gi~~~~~~~~----~~~~vigVep~ 219 (251)
+.||+||| .+...+.|+..++++.+ .++.|+|.+-.
T Consensus 201 ~~~~ai~~--~nd~~A~g~~~al~~~g~~vP~di~vig~D~~ 240 (305)
T 3huu_A 201 HMPSVIIT--SDVMLNMQLLNVLYEYQLRIPEDIQTATFNTS 240 (305)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEEEESCS
T ss_pred CCCCEEEE--CChHHHHHHHHHHHHcCCCCCcceEEEEECCc
Confidence 46899987 46677889999999886 36899999855
No 238
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=68.35 E-value=38 Score=27.29 Aligned_cols=72 Identities=17% Similarity=0.078 Sum_probs=43.9
Q ss_pred CeEEEEecc--ChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHH-cC-CEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTG--GNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRA-LG-AEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ss--GN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~-~G-a~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+ |.-|+++|....+.|.+++++.........++.+.. .| +..+.++-. +.++..+..++..++.
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 84 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVT-QDEELDALFAGVKEAF 84 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHHHHHHHc
Confidence 455777776 889999999988889997776544322334444443 33 455555543 4444444455554443
No 239
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=68.26 E-value=18 Score=29.46 Aligned_cols=73 Identities=19% Similarity=0.155 Sum_probs=44.6
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcC-CEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALG-AEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~G-a~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
|++.+|+..+|--|.++|....+.|.+++++...... ....+.++..| .++..+..+ .+.++..+..++..++
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE 85 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3556788888999999999999999987776533211 22344555555 455544321 2445555555555444
No 240
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=68.24 E-value=23 Score=28.57 Aligned_cols=72 Identities=19% Similarity=0.219 Sum_probs=42.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHc-CCEEEEeCCC-CChHHHHHHHHHHhh
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRAL-GAEVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~-Ga~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
+++.+|+..+|--|+++|....+.|.+++++...... ....+.++.. |.++..+..+ .+.++..+..++..+
T Consensus 4 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR 79 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3456888888999999999999999987766433211 1122333333 6666665432 233444444444444
No 241
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=68.16 E-value=18 Score=30.99 Aligned_cols=57 Identities=25% Similarity=0.170 Sum_probs=38.9
Q ss_pred HHcCCCC-CCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHH-HcCCEEEE
Q 025563 69 EEKGLIT-PGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLR-ALGAEVYL 129 (251)
Q Consensus 69 ~~~g~~~-~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~-~~Ga~v~~ 129 (251)
+.+..+. +|++.+|. ++|.-|.+.+..|+.+|.+++++... +.+++.++ .+|++.+.
T Consensus 172 l~~~~~~~~g~~VlV~-GaG~vG~~a~qlak~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~vi 230 (357)
T 2cf5_A 172 LSHFGLKQPGLRGGIL-GLGGVGHMGVKIAKAMGHHVTVISSS---NKKREEALQDLGADDYV 230 (357)
T ss_dssp HHHTSTTSTTCEEEEE-CCSHHHHHHHHHHHHHTCEEEEEESS---TTHHHHHHTTSCCSCEE
T ss_pred HHhcCCCCCCCEEEEE-CCCHHHHHHHHHHHHCCCeEEEEeCC---hHHHHHHHHHcCCceee
Confidence 3333455 77875555 57999999999999999976555433 34566666 88987543
No 242
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=68.01 E-value=24 Score=28.76 Aligned_cols=71 Identities=13% Similarity=0.051 Sum_probs=44.2
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcH-HHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhh
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASM-ERRIVLRALGAEVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~-~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
++.+|+..+|.-|.++|......|.+++++....... ...+.++..|.++..+..+ .+.++..+...+..+
T Consensus 35 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 107 (279)
T 3ctm_A 35 KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEK 107 (279)
T ss_dssp CEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHH
Confidence 4558888889999999999888899987776543332 3344455567666555332 234444444444433
No 243
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=67.91 E-value=18 Score=30.85 Aligned_cols=56 Identities=18% Similarity=0.230 Sum_probs=38.7
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCC-CcEEEEecCCCcHHHHHHHHHcCCEEEEe
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRG-YKLIIVMPSIASMERRIVLRALGAEVYLA 130 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G-~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v 130 (251)
+...+++|++.+|...+|..|.+.+..|+.+| .+++... +..+.+.++ +|++.+.-
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~----~~~~~~~~~-~ga~~~~~ 192 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA----STFKHEAIK-DSVTHLFD 192 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE----CGGGHHHHG-GGSSEEEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC----CHHHHHHHH-cCCcEEEc
Confidence 45667888885555556999999999999886 4444433 235666677 89876554
No 244
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=67.91 E-value=21 Score=29.30 Aligned_cols=72 Identities=14% Similarity=0.110 Sum_probs=42.2
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+|.-|+++|....+.|.+++++...... ....+.++..| ++..+..+ .+.++..+..++..++.
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELS 103 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 456888888999999999999999987665432111 11223344445 55554332 24444444445554443
No 245
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=67.66 E-value=20 Score=34.73 Aligned_cols=74 Identities=24% Similarity=0.235 Sum_probs=48.9
Q ss_pred CCCCeEEEEeccChHHHHHHHHHH-HCCCcEEEEecCC---C--cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHh
Q 025563 75 TPGKSVLIETTGGNTGIGLAFIAA-LRGYKLIIVMPSI---A--SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEIL 147 (251)
Q Consensus 75 ~~g~~~vv~~ssGN~g~alA~~a~-~~G~~~~ivvp~~---~--~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~ 147 (251)
+++++.+|+..+|-.|+++|..-. +.|.+.++++..+ . ....++.++..|++++.+... .+.++..+...+..
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~ 607 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP 607 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 456677888888999999998876 7899866666443 1 245577788899988776432 24444444444443
Q ss_pred h
Q 025563 148 S 148 (251)
Q Consensus 148 ~ 148 (251)
+
T Consensus 608 ~ 608 (795)
T 3slk_A 608 D 608 (795)
T ss_dssp T
T ss_pred H
Confidence 3
No 246
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=67.59 E-value=14 Score=30.62 Aligned_cols=73 Identities=16% Similarity=0.085 Sum_probs=44.7
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
|++.+|+..+|--|.++|..-.+.|.+++++..... .....+.++..|.++..+..+ .+.++..+...+..++
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR 82 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 355688888899999999999999998665432211 122334455567787776542 2444444445555444
No 247
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=67.58 E-value=17 Score=30.68 Aligned_cols=73 Identities=16% Similarity=0.175 Sum_probs=46.7
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC---------CcHH----HHHHHHHcCCEEEEeCCC-CChHHHHHH
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI---------ASME----RRIVLRALGAEVYLADQA-GGFEGILRK 142 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~---------~~~~----~~~~~~~~Ga~v~~v~~~-~~~~~~~~~ 142 (251)
|++.+|+..+|--|.++|..-.+.|.+++++-... .... ..+.++..|.++..+..+ .+.++..+.
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 125 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAV 125 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 35668888889999999999999999988774321 1122 234556678877665432 244555555
Q ss_pred HHHHhhc
Q 025563 143 GEEILSN 149 (251)
Q Consensus 143 a~~~~~~ 149 (251)
.++..++
T Consensus 126 ~~~~~~~ 132 (317)
T 3oec_A 126 VDEALAE 132 (317)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555444
No 248
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=67.56 E-value=19 Score=30.60 Aligned_cols=52 Identities=15% Similarity=0.098 Sum_probs=37.6
Q ss_pred CCCCCCeEEEEeccChHHHHHHHHHHHC--CCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 73 LITPGKSVLIETTGGNTGIGLAFIAALR--GYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 73 ~~~~g~~~vv~~ssGN~g~alA~~a~~~--G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
.+ +|++.+|. ++|.-|.+.+..|+.+ |.+++++. .++.+++.++.+|++.+.
T Consensus 168 ~~-~g~~VlV~-GaG~vG~~aiqlak~~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi 221 (344)
T 2h6e_A 168 KF-AEPVVIVN-GIGGLAVYTIQILKALMKNITIVGIS---RSKKHRDFALELGADYVS 221 (344)
T ss_dssp TC-SSCEEEEE-CCSHHHHHHHHHHHHHCTTCEEEEEC---SCHHHHHHHHHHTCSEEE
T ss_pred CC-CCCEEEEE-CCCHHHHHHHHHHHHhcCCCEEEEEe---CCHHHHHHHHHhCCCEEe
Confidence 45 77774454 4599999999999999 98744332 356788888899986543
No 249
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=67.53 E-value=26 Score=28.87 Aligned_cols=73 Identities=14% Similarity=0.155 Sum_probs=43.3
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHc-CCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRAL-GAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~-Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+|.-|.++|....+.|.+++++...... ....+.++.. |.++..+..+ .+.++..+..++..++.
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 456888888999999999999999987776543211 1122233322 6666554332 24444445555554443
No 250
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=67.52 E-value=30 Score=27.77 Aligned_cols=71 Identities=15% Similarity=0.118 Sum_probs=44.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
|++.+|+..+|--|+++|....+.|.+++++-. + .....+..+.+|.++..+..+ .+.++..+..++..++
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r-~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDI-N-AEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS-C-HHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-C-HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 456688888899999999999999998766532 2 122223334457777666532 2444444455555444
No 251
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=67.35 E-value=27 Score=28.45 Aligned_cols=71 Identities=18% Similarity=0.179 Sum_probs=42.5
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcC--CEEEEeCCC-CChHHHHHHHHHHhh
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALG--AEVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~G--a~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
++.+|+..+|.-|.++|......|.+++++...... ....+.++..| .++..+..+ .+.++..+..+++.+
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 456888888999999999999999987776543211 12234455555 455444321 244444444444433
No 252
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=67.32 E-value=11 Score=30.63 Aligned_cols=63 Identities=8% Similarity=0.021 Sum_probs=40.4
Q ss_pred EEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHH
Q 025563 80 VLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKG 143 (251)
Q Consensus 80 ~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a 143 (251)
.+|+..+|--|+++|....+.|.+++++............++..|.+++.++. .+.+...+.+
T Consensus 4 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~-~~v~~~~~~~ 66 (254)
T 1zmt_A 4 AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSE-QEPAELIEAV 66 (254)
T ss_dssp EEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCC-CSHHHHHHHH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECH-HHHHHHHHHH
Confidence 47888889999999999999999877654433222333336666777776632 2444444433
No 253
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=67.19 E-value=30 Score=29.12 Aligned_cols=73 Identities=26% Similarity=0.279 Sum_probs=45.6
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCC--EEEEe--CCCCChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGA--EVYLA--DQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga--~v~~v--~~~~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+|--|.++|......|.++++....... ....+.++..|. ++..+ +-. +.++..+.+.+..++.
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVA-SREGFKMAADEVEARF 85 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTT-CHHHHHHHHHHHHHHT
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCC-CHHHHHHHHHHHHHhC
Confidence 3566888888999999999999999987776544221 222344555554 55444 433 4445555555565554
No 254
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=66.65 E-value=27 Score=28.17 Aligned_cols=73 Identities=22% Similarity=0.249 Sum_probs=42.5
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHc-CCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRAL-GAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~-Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|.-|+++|....+.|.+++++...... ....+.++.. |.++..+..+ .+.++..+..++..++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS 82 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3556888888999999999999999987776543211 1112233333 6666554321 2444444444444443
No 255
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=66.64 E-value=19 Score=31.61 Aligned_cols=59 Identities=24% Similarity=0.329 Sum_probs=40.9
Q ss_pred cCCCCCCCeEEEEecc--ChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHHHH----HcCCEEEEeC
Q 025563 71 KGLITPGKSVLIETTG--GNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIVLR----ALGAEVYLAD 131 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ss--GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~v~ 131 (251)
.|.++ |.+ |+..+. +|.+++++.+++++|++++++.|+.- ++..++.++ ..|+++..+.
T Consensus 171 ~g~l~-gl~-va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~ 237 (359)
T 2w37_A 171 FGKLQ-GLT-LTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITD 237 (359)
T ss_dssp HSCCT-TCE-EEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred hCCcC-CeE-EEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 45443 344 555554 59999999999999999999999853 333333333 6788777765
No 256
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=66.49 E-value=17 Score=29.75 Aligned_cols=73 Identities=18% Similarity=0.187 Sum_probs=43.8
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHH-cCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRA-LGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~-~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|..-.+.|.+++++...... ....+.++. .|.++..+..+ .+.++..+.+++..++
T Consensus 20 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 20 GKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3556888888999999999999999987766543211 122333433 57766555321 2344555555555444
No 257
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=66.40 E-value=25 Score=28.48 Aligned_cols=71 Identities=11% Similarity=0.084 Sum_probs=43.7
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHH-HHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIV-LRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~-~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
|++.+|+..+|--|+++|..-.+.|.+++++... ..+++. .+.+|.++..+..+ .+.++..+..++..++.
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN---ESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 4566888888999999999999999987766432 233322 33346555544321 24455555555554443
No 258
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=66.08 E-value=58 Score=27.23 Aligned_cols=92 Identities=12% Similarity=0.088 Sum_probs=50.6
Q ss_pred CEEEEeCCCCCh---HHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHH
Q 025563 125 AEVYLADQAGGF---EGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSG 201 (251)
Q Consensus 125 a~v~~v~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~ 201 (251)
.+|..+.+..+. .++.+-.++..++++......-.......+.++. ...+++++- +++|+||+. +...+.|+.
T Consensus 146 ~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~~~-~~~~aI~~~--~d~~a~g~~ 221 (350)
T 3h75_A 146 IELLAFSGLKVTPAAQLRERGLRRALAEHPQVHLRQLVYGEWNRERAYR-QAQQLLKRY-PKTQLVWSA--NDEMALGAM 221 (350)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHHCTTEEEEEEEECTTCHHHHHH-HHHHHHHHC-TTEEEEEES--SHHHHHHHH
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeCCCcHHHHHH-HHHHHHHhC-CCcCEEEEC--ChHHHHHHH
Confidence 477777543222 2334444555555533111110111122333444 344555543 568888774 556777999
Q ss_pred HHHHhhC----CCcEEEEEeCCC
Q 025563 202 RFLKEKN----PNIKVYGVEPTE 220 (251)
Q Consensus 202 ~~~~~~~----~~~~vigVep~~ 220 (251)
.++++.+ .++.|+|++-..
T Consensus 222 ~al~~~G~~vP~di~vvg~d~~~ 244 (350)
T 3h75_A 222 QAARELGRKPGTDLLFSGVNSSP 244 (350)
T ss_dssp HHHHHTTCCBTTTBEEEEESCCH
T ss_pred HHHHHcCCCCCCCeEEEecCCCH
Confidence 9999886 359999998553
No 259
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=66.00 E-value=2.5 Score=31.80 Aligned_cols=46 Identities=15% Similarity=0.107 Sum_probs=32.3
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHH-HcCCEEEE
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLR-ALGAEVYL 129 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~-~~Ga~v~~ 129 (251)
++..+.|..|..+|...+..|.+++++-+. +.+.+.++ ..|..++.
T Consensus 22 v~IiG~G~iG~~la~~L~~~g~~V~vid~~---~~~~~~~~~~~g~~~~~ 68 (155)
T 2g1u_A 22 IVIFGCGRLGSLIANLASSSGHSVVVVDKN---EYAFHRLNSEFSGFTVV 68 (155)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESC---GGGGGGSCTTCCSEEEE
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEECC---HHHHHHHHhcCCCcEEE
Confidence 666678999999999999999987776433 23344444 56666544
No 260
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=65.95 E-value=17 Score=29.95 Aligned_cols=72 Identities=15% Similarity=0.107 Sum_probs=44.5
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEE--EEeCCCCChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEV--YLADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v--~~v~~~~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|..-.+.|.+++++...... ......++..|.++ +.++-. +.++..+.+++..++
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVN-DATAVDALVESTLKE 102 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCC-CHHHHHHHHHHHHHH
Confidence 3556788888899999999999999987776543221 22334455566554 444433 445555555555444
No 261
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=65.92 E-value=17 Score=29.68 Aligned_cols=69 Identities=17% Similarity=0.108 Sum_probs=41.9
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE--eCCCCChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL--ADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~--v~~~~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|.++|....+.|.+++++....... .+..+.++.++.. ++-. +.++..+...+..++
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~~ 76 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEAL--DDLVAAYPDRAEAISLDVT-DGERIDVVAADVLAR 76 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG--HHHHHHCTTTEEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHhccCCceEEEeeCC-CHHHHHHHHHHHHHh
Confidence 4568888889999999999999999887776443221 2223445555544 4433 444444444444443
No 262
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=65.84 E-value=13 Score=32.02 Aligned_cols=58 Identities=19% Similarity=0.209 Sum_probs=39.7
Q ss_pred HHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEE
Q 025563 68 AEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVY 128 (251)
Q Consensus 68 a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 128 (251)
+++...+++|++.+|. ++|.-|.+....|+.+|.+.++.+. .++.+++.++.++.+++
T Consensus 171 ~l~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~l~~~~~ 228 (363)
T 3m6i_A 171 GLQRAGVRLGDPVLIC-GAGPIGLITMLCAKAAGACPLVITD--IDEGRLKFAKEICPEVV 228 (363)
T ss_dssp HHHHHTCCTTCCEEEE-CCSHHHHHHHHHHHHTTCCSEEEEE--SCHHHHHHHHHHCTTCE
T ss_pred HHHHcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHhchhcc
Confidence 3455557778885554 5699999999999999998444442 34677777777743443
No 263
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=65.69 E-value=25 Score=29.12 Aligned_cols=54 Identities=13% Similarity=0.136 Sum_probs=38.4
Q ss_pred eEEEEeccChHHHHHHHHHHHCCCcEEEEecCC-C--cHHH---HHHHHHcCCEEEEeCC
Q 025563 79 SVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI-A--SMER---RIVLRALGAEVYLADQ 132 (251)
Q Consensus 79 ~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~-~--~~~~---~~~~~~~Ga~v~~v~~ 132 (251)
+.+|+..+|+.|.+++......|.+++++.... . .+.+ +..++..|++++..+-
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~ 65 (321)
T 3c1o_A 6 KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEM 65 (321)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecC
Confidence 347888889999999999988999988887553 1 1233 2234556888877764
No 264
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=65.57 E-value=23 Score=29.22 Aligned_cols=69 Identities=13% Similarity=0.139 Sum_probs=41.7
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEE--EEeCCCCChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEV--YLADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v--~~v~~~~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|+++|..-.+.|.+++++-... ....+..+.+|.++ +.++-. +.++..+..++..++
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDG--DAADAAATKIGCGAAACRVDVS-DEQQIIAMVDACVAA 100 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHHHCSSCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHcCCcceEEEecCC-CHHHHHHHHHHHHHH
Confidence 5568888889999999999999999877764322 11122233345544 444443 445555555555444
No 265
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=65.40 E-value=28 Score=31.90 Aligned_cols=59 Identities=15% Similarity=0.059 Sum_probs=43.5
Q ss_pred CCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEe-cCCC---------------cHHHHHHHHHcCCEEEEeCC
Q 025563 74 ITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVM-PSIA---------------SMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 74 ~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivv-p~~~---------------~~~~~~~~~~~Ga~v~~v~~ 132 (251)
++++++.+|+..+|--|.++|..-.+.|.+.++++ ..+. ....++.++..|+++..+..
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~ 322 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTC 322 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEEC
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEEC
Confidence 44567778888889999999998888899877766 4432 23456667888998877653
No 266
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=65.36 E-value=21 Score=29.03 Aligned_cols=71 Identities=17% Similarity=0.191 Sum_probs=44.6
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEe--CCCCChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLA--DQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v--~~~~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|+++|..-.+.|.+++++...... ......++..|.++..+ +-. +.++..+.+++..++
T Consensus 26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVA-DFESCERCAEKVLAD 100 (269)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCC-CHHHHHHHHHHHHHH
Confidence 455777888899999999999999988776533322 12234455566655444 433 455555555555544
No 267
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=65.33 E-value=25 Score=29.21 Aligned_cols=72 Identities=15% Similarity=0.063 Sum_probs=43.5
Q ss_pred CeEEEEeccC--hHHHHHHHHHHHCCCcEEEEecCCCcHHHHHH-HHHcC-CEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTGG--NTGIGLAFIAALRGYKLIIVMPSIASMERRIV-LRALG-AEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ssG--N~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~-~~~~G-a~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+| --|+++|..-.+.|.+++++.........++. .+..| ...+.++-. +.++..+.+++..++.
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVS-DAESVDNMFKVLAEEW 106 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 4557777666 78999999999999997776654333333333 33334 344455543 5555555556655543
No 268
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=65.33 E-value=45 Score=26.76 Aligned_cols=68 Identities=21% Similarity=0.148 Sum_probs=41.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhh
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILS 148 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~ 148 (251)
+++.+|+..+|.-|+++|..-.+.|.+++++..........+.++ . ..+.++-. +.++..+..++..+
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~-~~~~~D~~-~~~~~~~~~~~~~~ 73 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIG--G-AFFQVDLE-DERERVRFVEEAAY 73 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHT--C-EEEECCTT-CHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhh--C-CEEEeeCC-CHHHHHHHHHHHHH
Confidence 355688888899999999999999998777654432221222222 2 55555543 44444444444433
No 269
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=65.30 E-value=28 Score=28.23 Aligned_cols=73 Identities=21% Similarity=0.115 Sum_probs=42.9
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHc--CCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRAL--GAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~--Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|.-|+++|....+.|.+++++...... ....+.++.. |.++..+..+ .+.++..+..++..++
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3556888888999999999999999987776543211 1122333333 6666554321 2444444444444443
No 270
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=65.20 E-value=27 Score=30.03 Aligned_cols=53 Identities=25% Similarity=0.283 Sum_probs=36.8
Q ss_pred CCC-CCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHH-HcCCEEEE
Q 025563 73 LIT-PGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLR-ALGAEVYL 129 (251)
Q Consensus 73 ~~~-~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~-~~Ga~v~~ 129 (251)
.+. +|++.+|. ++|.-|.+.+..++.+|.+++++... +.+++.++ .+|++.+.
T Consensus 183 ~~~~~g~~VlV~-GaG~vG~~~~q~a~~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~v~ 237 (366)
T 1yqd_A 183 GLDEPGKHIGIV-GLGGLGHVAVKFAKAFGSKVTVISTS---PSKKEEALKNFGADSFL 237 (366)
T ss_dssp TCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEESC---GGGHHHHHHTSCCSEEE
T ss_pred CcCCCCCEEEEE-CCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHhcCCceEE
Confidence 345 77775555 56999999999999999976555432 34555554 88987543
No 271
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=65.17 E-value=42 Score=26.96 Aligned_cols=74 Identities=14% Similarity=0.108 Sum_probs=44.9
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHc---CCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRAL---GAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~---Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+|--|.++|..-.+.|.+++++...... ....+.++.. .++.+.++-. .+.++..+..++..++.
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY 90 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence 4566888888999999999999999987766533211 1122333332 3455666541 24455555556665554
No 272
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=65.12 E-value=44 Score=26.34 Aligned_cols=73 Identities=22% Similarity=0.113 Sum_probs=42.8
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcH-HHHHHHHH-cCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASM-ERRIVLRA-LGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~-~~~~~~~~-~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|.-|.++|....+.|.+++++....... ...+.++. .|.++..+..+ .+.++..+..++..++
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL 82 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 34568888889999999999999999877765432111 11222332 46666554322 2444444444555444
No 273
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=65.03 E-value=25 Score=30.25 Aligned_cols=60 Identities=20% Similarity=0.176 Sum_probs=40.8
Q ss_pred cCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHHH----HHcCCEEEEeC
Q 025563 71 KGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIVL----RALGAEVYLAD 131 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~~----~~~Ga~v~~v~ 131 (251)
.|.++ |.+..+..-.+|.+++++.+++++|++++++.|+.- ++.-++.+ +..|+++..+.
T Consensus 152 ~g~l~-glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 217 (323)
T 3gd5_A 152 FGRLA-GLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILR 217 (323)
T ss_dssp HSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred hCCCC-CCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 45443 445344444589999999999999999999999864 33333332 34677777665
No 274
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=65.01 E-value=25 Score=28.32 Aligned_cols=70 Identities=13% Similarity=-0.090 Sum_probs=42.1
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHH
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEI 146 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~ 146 (251)
+++.+|+..+|--|.++|....+.|.+++++...... ....+.++..|.++..+..+ .+.++..+..++.
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTV 85 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHH
Confidence 3556888888999999999999999987776543211 12234455567666544322 2333344444443
No 275
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=64.69 E-value=52 Score=26.20 Aligned_cols=73 Identities=12% Similarity=0.200 Sum_probs=44.5
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHH-HHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVL-RALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~-~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+|.-|.++|..-.+.|.+++++...... ...++.+ +..+.++..+..+ .+.++..+.+++..++.
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 90 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 456888888999999999999999988777653322 2223333 2346666544321 24444445555555544
No 276
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=64.47 E-value=12 Score=33.22 Aligned_cols=49 Identities=16% Similarity=0.141 Sum_probs=35.6
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
+.+ |+..+.|+.|.+.+..++.+|.+++++ .. ...+.+.++.+|++.+.
T Consensus 172 g~~-V~ViGaG~iG~~aa~~a~~~Ga~V~v~-D~--~~~~~~~~~~lGa~~~~ 220 (401)
T 1x13_A 172 PAK-VMVIGAGVAGLAAIGAANSLGAIVRAF-DT--RPEVKEQVQSMGAEFLE 220 (401)
T ss_dssp CCE-EEEECCSHHHHHHHHHHHHTTCEEEEE-CS--CGGGHHHHHHTTCEECC
T ss_pred CCE-EEEECCCHHHHHHHHHHHHCCCEEEEE-cC--CHHHHHHHHHcCCEEEE
Confidence 444 777778999999999999999864443 32 33455566778998653
No 277
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=64.30 E-value=32 Score=30.02 Aligned_cols=65 Identities=20% Similarity=0.138 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHc--CC-CCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHH-HHHHcCCEE
Q 025563 59 RIALSMIKDAEEK--GL-ITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRI-VLRALGAEV 127 (251)
Q Consensus 59 R~a~~~l~~a~~~--g~-~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~-~~~~~Ga~v 127 (251)
++..+.+..+.++ |. --.|++ ++..+.||-|..+|.....+|.+++ +.+. +..+++ ..+.+|++.
T Consensus 152 ~GV~~~~~~~~~~~~G~~~L~Gkt-V~V~G~G~VG~~~A~~L~~~GakVv-v~D~--~~~~l~~~a~~~ga~~ 220 (364)
T 1leh_A 152 YGVYRGMKAAAKEAFGSDSLEGLA-VSVQGLGNVAKALCKKLNTEGAKLV-VTDV--NKAAVSAAVAEEGADA 220 (364)
T ss_dssp HHHHHHHHHHHHHHHSSCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEE-EECS--CHHHHHHHHHHHCCEE
T ss_pred hHHHHHHHHHHHhhccccCCCcCE-EEEECchHHHHHHHHHHHHCCCEEE-EEcC--CHHHHHHHHHHcCCEE
Confidence 3555555554433 52 224555 8888889999999999999999866 4433 344444 334456643
No 278
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=64.15 E-value=28 Score=28.66 Aligned_cols=70 Identities=11% Similarity=0.097 Sum_probs=43.0
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|+++|..-.+.|.+++++.... ....+..+..|.++..+..+ .+.++..+..++..++
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNE--DAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAK 98 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 5568888889999999999999999877764322 22222333456666554321 2444555555555444
No 279
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=64.14 E-value=35 Score=27.46 Aligned_cols=73 Identities=21% Similarity=0.172 Sum_probs=42.6
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHc--CCEE--EEeCCCCChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRAL--GAEV--YLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~--Ga~v--~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+|.-|+++|....+.|.+++++...... ....+.++.. |.++ +.++-. +.++..+..++..++.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 84 (260)
T 2z1n_A 7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIR-EPGDIDRLFEKARDLG 84 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTT-CHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCC-CHHHHHHHHHHHHHhc
Confidence 3556888888999999999999999987776543211 1122233322 3344 444433 4444444555555543
No 280
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=64.10 E-value=24 Score=29.10 Aligned_cols=70 Identities=20% Similarity=0.163 Sum_probs=44.1
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHH-HHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRI-VLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~-~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
|++.+|+..+|--|+++|..-.+.|.+++++-.. ..+++ ..+.+|.++..+..+ .+.++..+.+++..++
T Consensus 5 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (281)
T 3zv4_A 5 GEVALITGGASGLGRALVDRFVAEGARVAVLDKS---AERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAA 76 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC---HHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 3566888888999999999999999987776432 23332 334456666554321 2445555555555444
No 281
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=64.02 E-value=41 Score=26.92 Aligned_cols=66 Identities=18% Similarity=0.197 Sum_probs=44.3
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+|.-|+++|....+.|.+++++...... +..|...+.++-. +.++..+..++..++.
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~D~~-d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-------EQYPFATEVMDVA-DAAQVAQVCQRLLAET 72 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-------SCCSSEEEECCTT-CHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-------hcCCceEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 3556888888999999999999999998877644321 2245666666654 4455555555555543
No 282
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=63.94 E-value=10 Score=33.23 Aligned_cols=49 Identities=14% Similarity=0.165 Sum_probs=35.3
Q ss_pred CCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEE
Q 025563 76 PGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVY 128 (251)
Q Consensus 76 ~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 128 (251)
++.+ |+..+.|..|.+.+..++.+|.+ +++.... +.+.+.++.+|++.+
T Consensus 171 ~g~~-V~ViGaG~iG~~aa~~a~~~Ga~-V~~~d~~--~~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 171 PPAR-VLVFGVGVAGLQAIATAKRLGAV-VMATDVR--AATKEQVESLGGKFI 219 (384)
T ss_dssp CCCE-EEEECCSHHHHHHHHHHHHTTCE-EEEECSC--STTHHHHHHTTCEEC
T ss_pred CCCE-EEEECCCHHHHHHHHHHHHCCCE-EEEEeCC--HHHHHHHHHcCCeEE
Confidence 3455 77777899999999999999997 3344332 344555667999865
No 283
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=63.89 E-value=23 Score=30.67 Aligned_cols=54 Identities=24% Similarity=0.214 Sum_probs=38.8
Q ss_pred CCeEEEEecc--ChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHHHH----HcCCEEEEeC
Q 025563 77 GKSVLIETTG--GNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIVLR----ALGAEVYLAD 131 (251)
Q Consensus 77 g~~~vv~~ss--GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~v~ 131 (251)
|.+ |+..+. .|.++++..+++++|++++++.|+.- ++.-++.++ ..|+++..+.
T Consensus 155 gl~-va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 216 (335)
T 1dxh_A 155 DIS-YAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTE 216 (335)
T ss_dssp GCE-EEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred CeE-EEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 344 555555 59999999999999999999999864 333334343 6788777765
No 284
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=63.62 E-value=12 Score=30.80 Aligned_cols=25 Identities=16% Similarity=0.282 Sum_probs=22.5
Q ss_pred cChHHHHHHHHHHHCCCcEEEEecC
Q 025563 86 GGNTGIGLAFIAALRGYKLIIVMPS 110 (251)
Q Consensus 86 sGN~g~alA~~a~~~G~~~~ivvp~ 110 (251)
+|-.|.++|.++.+.|.+++++...
T Consensus 28 SG~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 28 TGHLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 8999999999999999999888743
No 285
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=63.60 E-value=31 Score=28.11 Aligned_cols=69 Identities=14% Similarity=0.167 Sum_probs=42.0
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHH-HHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERR-IVLRALGAEVYLADQA-GGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~-~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+|--|+++|..-.+.|.+++++... ..+. +..+.++.++..+..+ .+.++..+.+++. ++.
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~ 101 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLA---AEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-NQL 101 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-TTS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---hHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-HHh
Confidence 456888888999999999999999987665432 2232 2233446655544321 2444455555555 443
No 286
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=63.60 E-value=24 Score=29.10 Aligned_cols=54 Identities=17% Similarity=0.150 Sum_probs=42.9
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLAD 131 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~ 131 (251)
|++.+|+.+++--|+++|..-.+.|.++++.- .+..+...+.++..|.++..+.
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~-r~~~~~~~~~~~~~g~~~~~~~ 62 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAA-RRAPDETLDIIAKDGGNASALL 62 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE-SSCCHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEe-CCcHHHHHHHHHHhCCcEEEEE
Confidence 56668888889999999999999999977664 3444677888899998876654
No 287
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=63.43 E-value=22 Score=28.74 Aligned_cols=69 Identities=12% Similarity=0.107 Sum_probs=42.3
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHH-HHc--CCEEEEeCCCCChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVL-RAL--GAEVYLADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~-~~~--Ga~v~~v~~~~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|.-|+++|....+.|.+++++... ..+.+.+ +.+ .+..+.++-. +.++..+..++..++
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~-d~~~v~~~~~~~~~~ 83 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLD---VMAAQAVVAGLENGGFAVEVDVT-KRASVDAAMQKAIDA 83 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTCTTCCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHhcCCeEEEEeCC-CHHHHHHHHHHHHHH
Confidence 3556888888999999999999999987766432 2333322 223 4555555543 444444444444443
No 288
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=63.19 E-value=39 Score=30.55 Aligned_cols=59 Identities=27% Similarity=0.274 Sum_probs=41.5
Q ss_pred CCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-----cHHHHHHHHHcCCEEEEeCC
Q 025563 74 ITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-----SMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 74 ~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-----~~~~~~~~~~~Ga~v~~v~~ 132 (251)
++++++.+|+..+|.-|.++|....+.|.+.++++..+. .....+.++..|+++..+..
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~ 286 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAAC 286 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEe
Confidence 445677788999999999999998888997444443322 13345567888998866643
No 289
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=63.05 E-value=59 Score=26.68 Aligned_cols=74 Identities=9% Similarity=0.021 Sum_probs=47.2
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCc
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGT 193 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGt 193 (251)
....+.+...|++|+.++.. .+...+.++++.+......++ +. +-...+ ....+..++.++. +.+|.+|-.+|.
T Consensus 21 ~aiA~~la~~Ga~Vv~~~~~--~~~~~~~~~~i~~~g~~~~~~-~~-Dvt~~~-~v~~~~~~~~~~~-G~iDiLVNNAGi 94 (254)
T 4fn4_A 21 RAIAKKFALNDSIVVAVELL--EDRLNQIVQELRGMGKEVLGV-KA-DVSKKK-DVEEFVRRTFETY-SRIDVLCNNAGI 94 (254)
T ss_dssp HHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEE-EC-CTTSHH-HHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHhcCCcEEEE-Ec-cCCCHH-HHHHHHHHHHHHc-CCCCEEEECCcc
Confidence 34566677899999999874 344445555555443233322 33 223332 5566777888888 679999999983
No 290
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=63.00 E-value=33 Score=27.10 Aligned_cols=73 Identities=19% Similarity=0.173 Sum_probs=42.5
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCC-------cEEEEecCCCc-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhh
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGY-------KLIIVMPSIAS-MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~-------~~~ivvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
++.+|+..+|--|.++|....+.|. +++++...... ....+.++..|.++..+... .+.++..+..+++.+
T Consensus 3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 82 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence 3458888889999999999888898 55555432111 11223345557777655432 234444444455544
Q ss_pred cC
Q 025563 149 NT 150 (251)
Q Consensus 149 ~~ 150 (251)
+.
T Consensus 83 ~~ 84 (244)
T 2bd0_A 83 RY 84 (244)
T ss_dssp HT
T ss_pred hC
Confidence 43
No 291
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=63.00 E-value=49 Score=25.35 Aligned_cols=49 Identities=14% Similarity=0.118 Sum_probs=36.2
Q ss_pred EEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 80 VLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 80 ~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
.+|+..+|.-|.+++......|.+++++.... .+...+. .+.+++..+-
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~---~~~~~~~-~~~~~~~~D~ 51 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNA---GKITQTH-KDINILQKDI 51 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCS---HHHHHHC-SSSEEEECCG
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc---hhhhhcc-CCCeEEeccc
Confidence 47888889999999999999999988887643 2333333 5777776654
No 292
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=62.93 E-value=29 Score=28.45 Aligned_cols=68 Identities=13% Similarity=0.182 Sum_probs=41.3
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHH-HHHHHcCCE--EEEeCCCCChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERR-IVLRALGAE--VYLADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~-~~~~~~Ga~--v~~v~~~~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|+++|..-.+.|.+++++... ..++ +..+.++.+ .+.++-. +.++..+.+++..++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR---LDALQETAAEIGDDALCVPTDVT-DPDSVRALFTATVEK 99 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHTSCCEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhCCCeEEEEecCC-CHHHHHHHHHHHHHH
Confidence 455778888889999999999999987765432 2222 223334444 4444443 445555555555444
No 293
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=62.55 E-value=43 Score=30.57 Aligned_cols=59 Identities=29% Similarity=0.260 Sum_probs=42.1
Q ss_pred CCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-----cHHHHHHHHHcCCEEEEeCC
Q 025563 74 ITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-----SMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 74 ~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-----~~~~~~~~~~~Ga~v~~v~~ 132 (251)
++++++.+|+..+|..|.++|......|.+.++++.... .....+.++..|+++..+..
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~ 319 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAAC 319 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEe
Confidence 445677788999999999999998899996444443322 13455667888988876643
No 294
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=62.52 E-value=58 Score=26.01 Aligned_cols=117 Identities=15% Similarity=0.115 Sum_probs=62.9
Q ss_pred CCCcEEEEecCC-Cc--------------HHHHHHHHHcCC-EEEEeCCCCCh-HHHHHHHHHHhhcCCCeEecCCCCCC
Q 025563 100 RGYKLIIVMPSI-AS--------------MERRIVLRALGA-EVYLADQAGGF-EGILRKGEEILSNTPNGFMFRQFENP 162 (251)
Q Consensus 100 ~G~~~~ivvp~~-~~--------------~~~~~~~~~~Ga-~v~~v~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~n~ 162 (251)
.|+|++.+-... .. ..-.+.+...|. +|..+.+.... .++.+-.++..++++-..-.......
T Consensus 78 ~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~i~~i~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~ 157 (280)
T 3gyb_A 78 SLPPFVIAGTRITQASTHDSVANDDFRGAEIATKHLIDLGHTHIAHLRVGSGAGLRRFESFEATMRAHGLEPLSNDYLGP 157 (280)
T ss_dssp -CCCEEEESCCCSSSCSTTEEEECHHHHHHHHHHHHHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHTTCCCEECCCCSC
T ss_pred cCCCEEEECCCCCCCCCCCEEEechHHHHHHHHHHHHHCCCCeEEEEeCCCchHHHHHHHHHHHHHHcCcCCCcccccCC
Confidence 899988775322 10 112334444564 57677654222 23333334444444211111112222
Q ss_pred chHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhC----CCcEEEEEeCCC
Q 025563 163 ANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKN----PNIKVYGVEPTE 220 (251)
Q Consensus 163 ~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~----~~~~vigVep~~ 220 (251)
...+.++. ...+++++- +++|+|||. +...+.|+..++++.+ .++.|+|.+-..
T Consensus 158 ~~~~~~~~-~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~~~ 215 (280)
T 3gyb_A 158 AVEHAGYT-ETLALLKEH-PEVTAIFSS--NDITAIGALGAARELGLRVPEDLSIIGYDNTP 215 (280)
T ss_dssp CCHHHHHH-HHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHHTCCTTTTCEEEEESCCH
T ss_pred CCHHHHHH-HHHHHHhCC-CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCeeEEEEECCch
Confidence 33333544 344555543 579999875 5667789999999986 368999998543
No 295
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=62.49 E-value=48 Score=29.90 Aligned_cols=50 Identities=12% Similarity=-0.014 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHHHcCCCC-CCCeEEEEeccChHHHHHHHHHHHCCCcEEEEe
Q 025563 58 DRIALSMIKDAEEKGLIT-PGKSVLIETTGGNTGIGLAFIAALRGYKLIIVM 108 (251)
Q Consensus 58 ~R~a~~~l~~a~~~g~~~-~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivv 108 (251)
-++..+.+..+.+..... .|++ ++..+.||-|..+|.....+|.+++.+.
T Consensus 215 g~Gv~~~~~~~~~~~~~~l~Gk~-vaVQG~GnVG~~aa~~L~e~GakvVavs 265 (450)
T 4fcc_A 215 GYGLVYFTEAMLKRHGMGFEGMR-VSVSGSGNVAQYAIEKAMEFGARVITAS 265 (450)
T ss_dssp HHHHHHHHHHHHHHTTCCSTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred eeeHHHHHHHHHHHcCCCcCCCE-EEEeCCChHHHHHHHHHHhcCCeEEEEe
Confidence 457777777766543233 3444 8999999999999999999999988664
No 296
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=62.47 E-value=31 Score=31.52 Aligned_cols=51 Identities=18% Similarity=0.147 Sum_probs=34.0
Q ss_pred CeEEEEeccChHH---HHHHHHHHHCCCcEEEEecCC-CcH---HHHHHHHHcCCEEE
Q 025563 78 KSVLIETTGGNTG---IGLAFIAALRGYKLIIVMPSI-ASM---ERRIVLRALGAEVY 128 (251)
Q Consensus 78 ~~~vv~~ssGN~g---~alA~~a~~~G~~~~ivvp~~-~~~---~~~~~~~~~Ga~v~ 128 (251)
...+|.++.||.| .++|...+..|+++.++.+.. .+. .+++.++..|.++.
T Consensus 53 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 53 YRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 4457788888887 344444555699999998653 232 34667778887765
No 297
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=62.43 E-value=31 Score=28.20 Aligned_cols=69 Identities=16% Similarity=0.031 Sum_probs=44.3
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+|--|+++|....+.|.+++++... ..+++.+....+..+.++-. +.++..+..++..++.
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~~ 85 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARR---VERLKALNLPNTLCAQVDVT-DKYTFDTAITRAEKIY 85 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC---HHHHHTTCCTTEEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHhhcCCceEEEecCC-CHHHHHHHHHHHHHHC
Confidence 556888888999999999999999998876532 33444333334455555543 4555555555555443
No 298
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=62.41 E-value=51 Score=27.40 Aligned_cols=64 Identities=19% Similarity=0.155 Sum_probs=40.4
Q ss_pred HHHHHHHHHH-cCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEE
Q 025563 61 ALSMIKDAEE-KGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVY 128 (251)
Q Consensus 61 a~~~l~~a~~-~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 128 (251)
+.+.+..++. .+..-.|++ +..-+.|+.|+++|..++.+|.+++++-+. ..+.+.++.+|++.+
T Consensus 138 ae~a~~~~l~~~~~~l~g~~-v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~---~~~~~~~~~~g~~~~ 202 (293)
T 3d4o_A 138 AEGTIMMAIQHTDFTIHGAN-VAVLGLGRVGMSVARKFAALGAKVKVGARE---SDLLARIAEMGMEPF 202 (293)
T ss_dssp HHHHHHHHHHHCSSCSTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHhcCCCCCCCE-EEEEeeCHHHHHHHHHHHhCCCEEEEEECC---HHHHHHHHHCCCeec
Confidence 3444444433 232234555 777778999999999999999976655432 334445556787754
No 299
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=62.26 E-value=33 Score=28.09 Aligned_cols=71 Identities=14% Similarity=0.072 Sum_probs=41.0
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCC-EEEEeCCC-CChHHHHHHHHHHhh
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGA-EVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga-~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
++.+|+..+|--|.++|......|.+++++...... ....+.++..|. ++..+..+ .+.++..+..++..+
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 102 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK 102 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence 455888888999999999999999987776543211 112233444554 55444321 233444444444433
No 300
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=62.23 E-value=56 Score=26.77 Aligned_cols=50 Identities=22% Similarity=0.256 Sum_probs=31.8
Q ss_pred eEEEEeccChHH---HHHHHHHHHCCCcEEEEecCC--CcH---HHHHHHHHcCCEEE
Q 025563 79 SVLIETTGGNTG---IGLAFIAALRGYKLIIVMPSI--ASM---ERRIVLRALGAEVY 128 (251)
Q Consensus 79 ~~vv~~ssGN~g---~alA~~a~~~G~~~~ivvp~~--~~~---~~~~~~~~~Ga~v~ 128 (251)
+.+|.++.||.| .++|...+..|+++.++.+.. .+. ...+.++..|.++.
T Consensus 60 ~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 60 HVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPKRSERTEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECCCCCTTCHHHHHHHHHHHHTTCCEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEcCCCCCCHHHHHHHHHHHHcCCcEE
Confidence 457888888877 455555566799999987643 222 23455566666653
No 301
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=62.17 E-value=62 Score=26.25 Aligned_cols=46 Identities=7% Similarity=-0.091 Sum_probs=33.4
Q ss_pred HHHHHhhhhC--CCCCEEEEecCchhHHHHHHHHHHhhC----CCcEEEEEeCC
Q 025563 172 TGPEIWKDSG--GDVDILVAGIGTGGTVTGSGRFLKEKN----PNIKVYGVEPT 219 (251)
Q Consensus 172 ~~~EI~~q~~--~~~d~vv~~vGtGg~~~Gi~~~~~~~~----~~~~vigVep~ 219 (251)
...+++++.. ..||+||| .+...+.|+..++++.+ .++.|+|.+-.
T Consensus 179 ~~~~~l~~~~~~~~~~ai~~--~~d~~A~g~~~al~~~g~~vP~di~vig~D~~ 230 (295)
T 3hcw_A 179 YMQNLHTRLKDPNIKQAIIS--LDAMLHLAILSVLYELNIEIPKDVMTATFNDS 230 (295)
T ss_dssp HHHHHHHHHTCTTSCEEEEE--SSHHHHHHHHHHHHHTTCCTTTTEEEEEECCS
T ss_pred HHHHHHhhcccCCCCcEEEE--CChHHHHHHHHHHHHcCCCCCCceEEEEeCCh
Confidence 3445555542 36888886 56677889999999986 36889999854
No 302
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=62.02 E-value=45 Score=28.20 Aligned_cols=72 Identities=15% Similarity=0.061 Sum_probs=45.1
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecC--CCcHHHHHH----HHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPS--IASMERRIV----LRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~--~~~~~~~~~----~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|.++|....+.|.++++.+.. +....+++. ++..|.++..+..+ .+.++..+..++..++
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~ 84 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE 84 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 456888888999999999999999998877643 233444333 34456666554322 2444444444555443
No 303
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=61.78 E-value=46 Score=28.14 Aligned_cols=53 Identities=25% Similarity=0.324 Sum_probs=37.8
Q ss_pred cCCCCCCCeEEEEeccChHHHHHHHHHHHCCC-cEEEEecCCCcHHHHHHHHHcCCEEEE
Q 025563 71 KGLITPGKSVLIETTGGNTGIGLAFIAALRGY-KLIIVMPSIASMERRIVLRALGAEVYL 129 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~-~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 129 (251)
...+ +|++.+|... |.-|.+.+..++.+|. +++++. .++.+++.++.+ ++.+.
T Consensus 160 ~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~---~~~~~~~~~~~l-a~~v~ 213 (343)
T 2dq4_A 160 GSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSD---PNPYRLAFARPY-ADRLV 213 (343)
T ss_dssp TTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEEC---SCHHHHGGGTTT-CSEEE
T ss_pred hCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC---CCHHHHHHHHHh-HHhcc
Confidence 5556 7887555554 9999999999999999 666553 245677777777 76443
No 304
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=61.58 E-value=28 Score=28.20 Aligned_cols=33 Identities=18% Similarity=0.173 Sum_probs=27.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
+++.+|+..+|.-|+++|....+.|.+++++..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 355688888899999999999999998777643
No 305
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=61.53 E-value=41 Score=27.67 Aligned_cols=72 Identities=14% Similarity=0.073 Sum_probs=42.9
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHH-----cCCEEEEeCCC-CChHHHHHHHHHHhh
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRA-----LGAEVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~-----~Ga~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
+++.+|+..+|--|.++|....+.|.+++++...... ....+.++. .+.++..+..+ .+.++..+...+..+
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 3556888888999999999999999987776543211 112233443 46666555432 234444444444433
No 306
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=61.52 E-value=63 Score=26.09 Aligned_cols=73 Identities=23% Similarity=0.254 Sum_probs=43.9
Q ss_pred CCeEEEEeccC--hHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcC---CEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGG--NTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALG---AEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssG--N~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~G---a~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
|++.+|+..+| --|+++|..-.+.|.++++.-..... ....+.++..| +..+.+|-. +.++..+..++..++.
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQ-SDEEVINGFEQIGKDV 84 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCC-CHHHHHHHHHHHHHHh
Confidence 45656766545 47888888889999998776544333 23344455544 344555544 4556666566665554
No 307
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=61.39 E-value=29 Score=28.38 Aligned_cols=70 Identities=16% Similarity=0.218 Sum_probs=43.9
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHH-HHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMER-RIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~-~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|..-.+.|.+++++-.. ..+ .+..+.+|.++..+..+ .+.++..+..++..++
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTR---EDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAERE 98 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 3556888888999999999999999987766432 233 23345567766655432 2444555555555444
No 308
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=61.22 E-value=29 Score=31.68 Aligned_cols=97 Identities=15% Similarity=0.102 Sum_probs=60.9
Q ss_pred CCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCC
Q 025563 72 GLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTP 151 (251)
Q Consensus 72 g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~ 151 (251)
+...+|++ |+..+.|+-|..+|..++.+|.+++++ +.++.+....+.+|+++ + ++++ ..+..
T Consensus 269 ~~~l~Gkt-V~IiG~G~IG~~~A~~lka~Ga~Viv~---d~~~~~~~~A~~~Ga~~--~----~l~e-------~l~~a- 330 (494)
T 3ce6_A 269 DALIGGKK-VLICGYGDVGKGCAEAMKGQGARVSVT---EIDPINALQAMMEGFDV--V----TVEE-------AIGDA- 330 (494)
T ss_dssp CCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHTTCEE--C----CHHH-------HGGGC-
T ss_pred CCCCCcCE-EEEEccCHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHcCCEE--e----cHHH-------HHhCC-
Confidence 33556776 777778999999999999999965544 23456666777889974 2 2332 22333
Q ss_pred CeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhH
Q 025563 152 NGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGT 196 (251)
Q Consensus 152 ~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~ 196 (251)
+.++... .+...+ ..+.++.+ ++..+++-+|.+..
T Consensus 331 DvVi~at-gt~~~i-------~~~~l~~m--k~ggilvnvG~~~~ 365 (494)
T 3ce6_A 331 DIVVTAT-GNKDII-------MLEHIKAM--KDHAILGNIGHFDN 365 (494)
T ss_dssp SEEEECS-SSSCSB-------CHHHHHHS--CTTCEEEECSSSGG
T ss_pred CEEEECC-CCHHHH-------HHHHHHhc--CCCcEEEEeCCCCC
Confidence 4554432 222211 23455556 35788888988775
No 309
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=60.69 E-value=64 Score=25.90 Aligned_cols=36 Identities=11% Similarity=0.071 Sum_probs=28.6
Q ss_pred CCCCEEEEecCchhHHHHHHHHHHhhC----CCcEEEEEeCC
Q 025563 182 GDVDILVAGIGTGGTVTGSGRFLKEKN----PNIKVYGVEPT 219 (251)
Q Consensus 182 ~~~d~vv~~vGtGg~~~Gi~~~~~~~~----~~~~vigVep~ 219 (251)
+.||+|||. +...+.|+..++++.+ .++.|+|.+-.
T Consensus 191 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d~~ 230 (292)
T 3k4h_A 191 QPPTAIMAT--DDLIGLGVLSALSKKGFVVPKDVSIVSFNNA 230 (292)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEESCC
T ss_pred CCCcEEEEc--ChHHHHHHHHHHHHhCCCCCCeEEEEEecCc
Confidence 468999975 5667779999999886 46889999754
No 310
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=60.65 E-value=30 Score=27.33 Aligned_cols=69 Identities=19% Similarity=0.116 Sum_probs=41.7
Q ss_pred eEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcH--HHHHHHHHcCCEEEE---eCCCCChHHHHHHHHHHhh
Q 025563 79 SVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASM--ERRIVLRALGAEVYL---ADQAGGFEGILRKGEEILS 148 (251)
Q Consensus 79 ~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~--~~~~~~~~~Ga~v~~---v~~~~~~~~~~~~a~~~~~ 148 (251)
+.+|+..+|.-|.++|....+.|.+++++...+... ...+.++..|.++.. ++-. +.++..+..++..+
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~ 76 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL-EAEAATALVHQAAE 76 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTT-SHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCC-CHHHHHHHHHHHHH
Confidence 457888889999999999999999887764443221 123445556665543 3332 44444444444433
No 311
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=60.17 E-value=71 Score=26.30 Aligned_cols=45 Identities=18% Similarity=0.263 Sum_probs=32.8
Q ss_pred HHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhC-CCcEEEEEeCC
Q 025563 172 TGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKN-PNIKVYGVEPT 219 (251)
Q Consensus 172 ~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~-~~~~vigVep~ 219 (251)
...+++++- +++|+||++- ...+.|+..++++.+ .++.|+|.+..
T Consensus 179 ~~~~ll~~~-~~~~aI~~~n--D~~A~g~~~al~~~G~~dv~VvG~D~~ 224 (316)
T 1tjy_A 179 TAEGIIKAY-PDLDAIIAPD--ANALPAAAQAAENLKRNNLAIVGFSTP 224 (316)
T ss_dssp HHHHHHHHC-SSCCEEEECS--TTHHHHHHHHHHHTTCCSCEEEEBCCH
T ss_pred HHHHHHHhC-CCCCEEEECC--CccHHHHHHHHHHcCCCCEEEEEeCCC
Confidence 344555543 5689999864 456679999999887 56899999764
No 312
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=60.05 E-value=30 Score=28.33 Aligned_cols=72 Identities=24% Similarity=0.223 Sum_probs=42.4
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCC---EEEE--eCCCCChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGA---EVYL--ADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga---~v~~--v~~~~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|.-|+++|....+.|.+++++...... ....+.++..|. ++.. ++-. +.++..+..++..++
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 6 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT-TEDGQDQIINSTLKQ 83 (280)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCC-CHHHHHHHHHHHHHh
Confidence 3556888888999999999999999987776543211 122334444454 4544 4433 444444444444443
No 313
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=59.98 E-value=37 Score=27.88 Aligned_cols=54 Identities=19% Similarity=0.231 Sum_probs=38.1
Q ss_pred eEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHH---HHHcCCEEEEeCC
Q 025563 79 SVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIV---LRALGAEVYLADQ 132 (251)
Q Consensus 79 ~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~---~~~~Ga~v~~v~~ 132 (251)
+.+|+..+|..|.+++......|.+++++...... +.+.+. ++..|++++..+-
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 64 (313)
T 1qyd_A 6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 64 (313)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCS
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCC
Confidence 35788888999999999998899998887755322 344333 3445777766554
No 314
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=59.62 E-value=32 Score=28.57 Aligned_cols=71 Identities=23% Similarity=0.192 Sum_probs=42.7
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCC---EEEE--eCCCCChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGA---EVYL--ADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga---~v~~--v~~~~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|.-|+++|..-.+.|.+++++...... ....+.++..|. ++.. ++-. +.++..+...+..++
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT-EASGQDDIINTTLAK 103 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCC-CHHHHHHHHHHHHHh
Confidence 456888888999999999999999987776543211 122334555554 4544 4433 444444444444443
No 315
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=59.37 E-value=27 Score=28.70 Aligned_cols=54 Identities=17% Similarity=0.192 Sum_probs=38.3
Q ss_pred eEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC---cHHHHH---HHHHcCCEEEEeCC
Q 025563 79 SVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA---SMERRI---VLRALGAEVYLADQ 132 (251)
Q Consensus 79 ~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~---~~~~~~---~~~~~Ga~v~~v~~ 132 (251)
+.+|+..+|+.|.+++......|.+++++..... .+.+.+ .+...|++++..+-
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~ 65 (308)
T 1qyc_A 6 RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 65 (308)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCT
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEecc
Confidence 3578888899999999999999999888775432 133433 33456777776654
No 316
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=59.04 E-value=24 Score=28.42 Aligned_cols=72 Identities=14% Similarity=0.166 Sum_probs=43.8
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|+++|..-.+.|.+++++...... ....+.++..+.++..+..+ .+.++..+..++..++
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 455788888889999999999999998877554322 12223334455556554321 2445555555555444
No 317
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=58.94 E-value=27 Score=30.57 Aligned_cols=44 Identities=11% Similarity=0.055 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHCCCcEEEEecC-CC--cHHHHHHHH----HcCCEEEEeC
Q 025563 88 NTGIGLAFIAALRGYKLIIVMPS-IA--SMERRIVLR----ALGAEVYLAD 131 (251)
Q Consensus 88 N~g~alA~~a~~~G~~~~ivvp~-~~--~~~~~~~~~----~~Ga~v~~v~ 131 (251)
|.+++++.++.++|++++++.|+ .. ++.-++.++ ..|+.+..+.
T Consensus 207 rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 257 (359)
T 1zq6_A 207 AVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSH 257 (359)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEEC
T ss_pred chHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 89999999999999999999998 43 333333333 6688777665
No 318
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=58.88 E-value=67 Score=26.66 Aligned_cols=131 Identities=11% Similarity=0.037 Sum_probs=70.6
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCC-----------------Cc--HHHHHHHHHcCC-EEEEeCCCCCh-HHH
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSI-----------------AS--MERRIVLRALGA-EVYLADQAGGF-EGI 139 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~-----------------~~--~~~~~~~~~~Ga-~v~~v~~~~~~-~~~ 139 (251)
|+...+.....+++-.+...+++++.+.... .. ....+.+...|. +|..+.....+ .++
T Consensus 76 iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ia~i~~~~~~~~~~ 155 (358)
T 3hut_A 76 VLGDFSSTVSMAAGSIYGKEGMPQLSPTAAHPDYIKISPWQFRAITTPAFEGPNNAAWMIGDGFTSVAVIGVTTDWGLSS 155 (358)
T ss_dssp EEECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGTTSCTTEEESSCCGGGHHHHHHHHHHHTTCCEEEEEEESSHHHHHH
T ss_pred EEcCCCcHHHHHHHHHHHHCCCcEEecCCCCcccccCCCeEEEecCChHHHHHHHHHHHHHcCCCEEEEEecCcHHHHHH
Confidence 5555555666777778888999988752110 00 122444555574 45444322122 233
Q ss_pred HHHHHHHhhcCCCeE----ecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEE
Q 025563 140 LRKGEEILSNTPNGF----MFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYG 215 (251)
Q Consensus 140 ~~~a~~~~~~~~~~~----~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vig 215 (251)
.+..++..++.+..+ .+.. +.. .+.....++.+ ..||.||++ +.+..+.++.+.+++.+-++.+++
T Consensus 156 ~~~~~~~l~~~g~~v~~~~~~~~-~~~-----~~~~~~~~l~~---~~~d~i~~~-~~~~~a~~~~~~~~~~g~~~p~~~ 225 (358)
T 3hut_A 156 AQAFRKAFELRGGAVVVNEEVPP-GNR-----RFDDVIDEIED---EAPQAIYLA-MAYEDAAPFLRALRARGSALPVYG 225 (358)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECT-TCC-----CCHHHHHHHHH---HCCSEEEEE-SCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHHHHHHHHHcCCEEEEEEecCC-CCc-----cHHHHHHHHHh---cCCCEEEEc-cCchHHHHHHHHHHHcCCCCcEEe
Confidence 334444555542221 1111 111 11222333333 358888776 566678899999999888888888
Q ss_pred EeCCCC
Q 025563 216 VEPTES 221 (251)
Q Consensus 216 Vep~~s 221 (251)
.+....
T Consensus 226 ~~~~~~ 231 (358)
T 3hut_A 226 SSALYS 231 (358)
T ss_dssp CGGGCS
T ss_pred cCcccC
Confidence 765443
No 319
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=58.19 E-value=29 Score=27.57 Aligned_cols=51 Identities=22% Similarity=0.283 Sum_probs=35.6
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQA 133 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~ 133 (251)
++.+|+..+|.-|+++|..-.+.|.+++++.... .. .. +..|+..+.++-.
T Consensus 3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~-~~-~~---~~~~~~~~~~D~~ 53 (239)
T 2ekp_A 3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNP-EE-AA---QSLGAVPLPTDLE 53 (239)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-HH-HH---HHHTCEEEECCTT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HH-HH---HhhCcEEEecCCc
Confidence 4558888889999999999999999877765432 22 22 2236676766643
No 320
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=58.16 E-value=76 Score=25.99 Aligned_cols=75 Identities=19% Similarity=0.119 Sum_probs=48.7
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCc
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGT 193 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGt 193 (251)
....+.+...|++|+.++.. .+...+.++++.+.. +....-+.|- ...+ ....+..++.++. +.+|.+|..+|.
T Consensus 23 ~aia~~la~~Ga~Vvi~~~~--~~~~~~~~~~l~~~g-~~~~~~~~Dv-~~~~-~v~~~~~~~~~~~-G~iDiLVNNAG~ 96 (255)
T 4g81_D 23 FAYAEGLAAAGARVILNDIR--ATLLAESVDTLTRKG-YDAHGVAFDV-TDEL-AIEAAFSKLDAEG-IHVDILINNAGI 96 (255)
T ss_dssp HHHHHHHHHTTCEEEECCSC--HHHHHHHHHHHHHTT-CCEEECCCCT-TCHH-HHHHHHHHHHHTT-CCCCEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcC-CcEEEEEeeC-CCHH-HHHHHHHHHHHHC-CCCcEEEECCCC
Confidence 45567788899999999874 344445556665554 3333334432 2332 5566777888777 679999999985
Q ss_pred h
Q 025563 194 G 194 (251)
Q Consensus 194 G 194 (251)
.
T Consensus 97 ~ 97 (255)
T 4g81_D 97 Q 97 (255)
T ss_dssp C
T ss_pred C
Confidence 3
No 321
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=58.14 E-value=46 Score=26.38 Aligned_cols=33 Identities=21% Similarity=0.387 Sum_probs=27.5
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
+++.+|+..+|.-|+++|....+.|.+++++..
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDR 43 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 355688888899999999999999998777654
No 322
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=58.12 E-value=65 Score=25.16 Aligned_cols=67 Identities=21% Similarity=0.188 Sum_probs=41.7
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHH-HHc-CCEEEEeCCCCChHHHHHHHHHHhh
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVL-RAL-GAEVYLADQAGGFEGILRKGEEILS 148 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~-~~~-Ga~v~~v~~~~~~~~~~~~a~~~~~ 148 (251)
++.+|+..+|.-|.+++....+.|.+++++... ..+.+.+ +.. ..+++.++-. +.++..+..++..+
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~ 74 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARD---EKRLQALAAELEGALPLPGDVR-EEGDWARAVAAMEE 74 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHSTTCEEEECCTT-CHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhhhceEEEecCC-CHHHHHHHHHHHHH
Confidence 445888888999999999999999987776543 2333322 222 5666666654 44444444444433
No 323
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=57.99 E-value=43 Score=26.51 Aligned_cols=32 Identities=13% Similarity=0.236 Sum_probs=26.5
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
++.+|+..+|.-|.++|....+.|.+++++..
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r 34 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDL 34 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 44588888899999999999999998776654
No 324
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=57.96 E-value=39 Score=27.94 Aligned_cols=31 Identities=29% Similarity=0.294 Sum_probs=22.4
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCC---cEEEEe
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGY---KLIIVM 108 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~---~~~ivv 108 (251)
++.+|+..+|--|+++|..-.+.|. ++++..
T Consensus 34 k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~ 67 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYLEASNGDMKLILAA 67 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CEEEEecCCChHHHHHHHHHHHcCCCCceEEEEE
Confidence 4558888888899999887776665 554443
No 325
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=57.94 E-value=64 Score=26.28 Aligned_cols=75 Identities=19% Similarity=0.168 Sum_probs=44.9
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeE-ec-CCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEec
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGF-MF-RQFENPANPKIHYETTGPEIWKDSGGDVDILVAGI 191 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~-~~-~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~v 191 (251)
....+.+...|++|+.+... .....+.+.++.+..+..+ ++ -...++ .. ....+..++.++. +.+|.+|..+
T Consensus 26 ~~~a~~L~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~--~~-~v~~~~~~~~~~~-g~iD~lv~nA 99 (311)
T 3o26_A 26 FEICKQLSSNGIMVVLTCRD--VTKGHEAVEKLKNSNHENVVFHQLDVTDP--IA-TMSSLADFIKTHF-GKLDILVNNA 99 (311)
T ss_dssp HHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHTTTCCSEEEEECCTTSC--HH-HHHHHHHHHHHHH-SSCCEEEECC
T ss_pred HHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCCceEEEEccCCCc--HH-HHHHHHHHHHHhC-CCCCEEEECC
Confidence 35566777789999999874 3444445555554432222 22 122232 11 3345566666666 5799999999
Q ss_pred Cch
Q 025563 192 GTG 194 (251)
Q Consensus 192 GtG 194 (251)
|..
T Consensus 100 g~~ 102 (311)
T 3o26_A 100 GVA 102 (311)
T ss_dssp CCC
T ss_pred ccc
Confidence 975
No 326
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=57.91 E-value=33 Score=28.15 Aligned_cols=54 Identities=11% Similarity=0.179 Sum_probs=35.8
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC-Cc-HHHHHHHH-HcCCEEEEeC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI-AS-MERRIVLR-ALGAEVYLAD 131 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~-~~-~~~~~~~~-~~Ga~v~~v~ 131 (251)
++.+|+..+|--|+++|..-.+.|.+++++.... .. ....+.++ ..|.++..+.
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~ 80 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 80 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEE
Confidence 4568888889999999999889999877765433 11 12233344 5676665553
No 327
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=57.83 E-value=38 Score=29.34 Aligned_cols=55 Identities=15% Similarity=0.179 Sum_probs=36.5
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHH----HHHcCCEEEEeC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIV----LRALGAEVYLAD 131 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~----~~~~Ga~v~~v~ 131 (251)
|.+..+..-.+|.+++++.+++++|++++++.|+.- ++.-++. .+..|+.+..+.
T Consensus 175 glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 235 (339)
T 4a8t_A 175 DCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTD 235 (339)
T ss_dssp GCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEEC
T ss_pred CCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEC
Confidence 344344444489999999999999999999999864 2332332 244566665554
No 328
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=57.76 E-value=72 Score=25.56 Aligned_cols=150 Identities=17% Similarity=0.134 Sum_probs=81.8
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEecc-ChHHHHHHHHHHHCCCcEEEEecCC---Cc----------HHHHHHHHH--cCC
Q 025563 62 LSMIKDAEEKGLITPGKSVLIETTG-GNTGIGLAFIAALRGYKLIIVMPSI---AS----------MERRIVLRA--LGA 125 (251)
Q Consensus 62 ~~~l~~a~~~g~~~~g~~~vv~~ss-GN~g~alA~~a~~~G~~~~ivvp~~---~~----------~~~~~~~~~--~Ga 125 (251)
...+..+..++. .- +|.... ..........+...|+|++.+-... .. ..-.+.+.. .|.
T Consensus 51 ~~~~~~l~~~~v----dg-iIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~V~~D~~~~g~~~~~~l~~~~~g~ 125 (291)
T 3l49_A 51 VSQIQTLIAQKP----DA-IIEQLGNLDVLNPWLQKINDAGIPLFTVDTATPHAINNTTSNNYSIGAELALQMVADLGGK 125 (291)
T ss_dssp HHHHHHHHHHCC----SE-EEEESSCHHHHHHHHHHHHHTTCCEEEESCCCTTCSEEEEECHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC----CE-EEEeCCChhhhHHHHHHHHHCCCcEEEecCCCCCcCceEecChHHHHHHHHHHHHHHcCCC
Confidence 344555556654 22 444433 3344555556777899987764221 10 112333444 454
Q ss_pred -EEEEeCCCCCh---HHHHHHHHHHhhcCCCeEecCCC---CCCchHHHHHhhHHHHHhhhhCC---CCCEEEEecCchh
Q 025563 126 -EVYLADQAGGF---EGILRKGEEILSNTPNGFMFRQF---ENPANPKIHYETTGPEIWKDSGG---DVDILVAGIGTGG 195 (251)
Q Consensus 126 -~v~~v~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~---~n~~~~~~g~~t~~~EI~~q~~~---~~d~vv~~vGtGg 195 (251)
+|..+.+..+. .++.+-.++..+++++.-.+... ......+.++. ...+++++- + ++|+|||. +..
T Consensus 126 ~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~~~~~ai~~~--~d~ 201 (291)
T 3l49_A 126 GNVLVFNGFYSVPVCKIRYDQMKYVLEAFPDVKIIEPELRDVIPNTIQSAYS-NVTDMLTKY-PNEGDVGAIWAC--WDV 201 (291)
T ss_dssp EEEEEECSCTTSHHHHHHHHHHHHHHHTCTTEEECSSCBCCCSSSHHHHHHH-HHHHHHHHC-CSTTSCCEEEES--SHH
T ss_pred ceEEEEeCCCCCchHHHHHHHHHHHHHHCCCCEEEeeeccCCCCCCHHHHHH-HHHHHHHhC-CCcCCcCEEEEC--CCc
Confidence 56666543222 23344445555665443322211 11223333433 445666554 4 78999864 567
Q ss_pred HHHHHHHHHHhhCC-CcEEEEEeCCC
Q 025563 196 TVTGSGRFLKEKNP-NIKVYGVEPTE 220 (251)
Q Consensus 196 ~~~Gi~~~~~~~~~-~~~vigVep~~ 220 (251)
.+.|+..++++.+- ++.|+|.+-..
T Consensus 202 ~a~g~~~al~~~g~~di~vvg~d~~~ 227 (291)
T 3l49_A 202 PMIGATQALQAAGRTDIRTYGVDGSP 227 (291)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEEECCH
T ss_pred hHHHHHHHHHHcCCCCeEEEEecCCH
Confidence 78899999999865 89999998663
No 329
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=57.66 E-value=46 Score=26.80 Aligned_cols=33 Identities=24% Similarity=0.224 Sum_probs=27.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
+++.+|+..+|.-|.++|....+.|.+++++..
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r 48 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADI 48 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 355688888999999999999999998777643
No 330
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=57.51 E-value=58 Score=26.08 Aligned_cols=73 Identities=14% Similarity=0.068 Sum_probs=44.0
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHc-----CCEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRAL-----GAEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~-----Ga~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+..+|--|.++|....+.|.+++++...... ....+.++.. .+..+.++-. +.++..+.+++..++.
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDIT-DCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCC-CHHHHHHHHHHHHHhc
Confidence 3556888888999999999999999987766533211 1222333332 2344555543 5555555556655543
No 331
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=57.48 E-value=36 Score=27.45 Aligned_cols=78 Identities=12% Similarity=0.193 Sum_probs=44.5
Q ss_pred HHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhC-CCcEEEEE
Q 025563 138 GILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKN-PNIKVYGV 216 (251)
Q Consensus 138 ~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~-~~~~vigV 216 (251)
++.+-.++..++.|+.-+..........+.++. ...+++++- +++|+|||. +...+.|+..++++.+ .++.|+|.
T Consensus 148 ~R~~gf~~~l~~~~g~~~~~~~~~~~~~~~~~~-~~~~ll~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~dv~vig~ 223 (290)
T 2fn9_A 148 DRSNGFHSVVDQYPEFKMVAQQSAEFDRDTAYK-VTEQILQAH-PEIKAIWCG--NDAMALGAMKACEAAGRTDIYIFGF 223 (290)
T ss_dssp HHHHHHHHHHTTSTTEEEEEEEECTTCHHHHHH-HHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHTTCTTCEEECC
T ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCHHHHHH-HHHHHHHhC-CCCcEEEEC--CchHHHHHHHHHHHCCCCCeEEEEe
Confidence 344444555555544322211111122333443 344555542 568999875 5567789999999876 47899988
Q ss_pred eCC
Q 025563 217 EPT 219 (251)
Q Consensus 217 ep~ 219 (251)
+-.
T Consensus 224 d~~ 226 (290)
T 2fn9_A 224 DGA 226 (290)
T ss_dssp BCC
T ss_pred CCC
Confidence 754
No 332
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=57.39 E-value=19 Score=32.09 Aligned_cols=48 Identities=15% Similarity=0.115 Sum_probs=37.1
Q ss_pred EEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEe
Q 025563 80 VLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLA 130 (251)
Q Consensus 80 ~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v 130 (251)
+|+.-+.|..|.+.|..++.+|.+++++ + ..+.+++.++.+|++.+.+
T Consensus 192 kV~ViG~G~iG~~aa~~a~~lGa~V~v~-D--~~~~~l~~~~~~G~~~~~~ 239 (405)
T 4dio_A 192 KIFVMGAGVAGLQAIATARRLGAVVSAT-D--VRPAAKEQVASLGAKFIAV 239 (405)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEE-C--SSTTHHHHHHHTTCEECCC
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEE-c--CCHHHHHHHHHcCCceeec
Confidence 3788888999999999999999976554 2 3345677778899986554
No 333
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=57.28 E-value=17 Score=32.19 Aligned_cols=50 Identities=20% Similarity=0.021 Sum_probs=38.1
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEe
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLA 130 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v 130 (251)
+.+ |+.-+.|..|...|..++.+|.+++++ +....+++.++.+|++.+.+
T Consensus 184 ~~k-V~ViG~G~iG~~aa~~a~~lGa~V~v~---D~~~~~l~~~~~lGa~~~~l 233 (381)
T 3p2y_A 184 PAS-ALVLGVGVAGLQALATAKRLGAKTTGY---DVRPEVAEQVRSVGAQWLDL 233 (381)
T ss_dssp CCE-EEEESCSHHHHHHHHHHHHHTCEEEEE---CSSGGGHHHHHHTTCEECCC
T ss_pred CCE-EEEECchHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHcCCeEEec
Confidence 344 778888999999999999999975554 23345777778899987654
No 334
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=57.08 E-value=56 Score=26.37 Aligned_cols=72 Identities=8% Similarity=0.044 Sum_probs=43.1
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHH-cCC-EEEE--eCCCCChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRA-LGA-EVYL--ADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~-~Ga-~v~~--v~~~~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|..-.+.|.+++++...... ....+.++. .+. ++.. ++-. +.++..+..++..++
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVL-DALQVRAFAEACERT 84 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC-CHHHHHHHHHHHHHH
Confidence 4566888888999999999999999987666433211 122333443 443 3544 4433 455555555555444
No 335
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=56.87 E-value=66 Score=25.99 Aligned_cols=63 Identities=14% Similarity=0.062 Sum_probs=40.7
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|.-|+++|....+.|.+++++...... .-.+..+.++-. +.++..+..++..++
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~~~~~~Dl~-~~~~v~~~~~~~~~~ 71 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------EAKYDHIECDVT-NPDQVKASIDHIFKE 71 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------SCSSEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------CCceEEEEecCC-CHHHHHHHHHHHHHH
Confidence 456888889999999999999999988777644322 123445555543 444444444444443
No 336
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=56.86 E-value=64 Score=25.71 Aligned_cols=68 Identities=13% Similarity=0.098 Sum_probs=42.3
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCE--EEEeCCCCChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAE--VYLADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~--v~~v~~~~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|+++|..-.+.|.+++++.. +..+.+.+.....+ .+.++-. +.++..+..++..++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~ 72 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDI---DEKRSADFAKERPNLFYFHGDVA-DPLTLKKFVEYAMEK 72 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHTTCTTEEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHhcccCCeEEeeCC-CHHHHHHHHHHHHHH
Confidence 45588888899999999999999998777642 23444444433333 3444433 445555555555444
No 337
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=56.65 E-value=58 Score=26.30 Aligned_cols=92 Identities=8% Similarity=0.106 Sum_probs=52.3
Q ss_pred CEEEEeCCCCChH---HHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHH
Q 025563 125 AEVYLADQAGGFE---GILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSG 201 (251)
Q Consensus 125 a~v~~v~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~ 201 (251)
-+|..+.+..+.. ++.+-.++..+++++.-...........+.++.. ..+++++- +.||+|||. +...+.|+.
T Consensus 134 ~~I~~i~g~~~~~~~~~R~~Gf~~al~~~~g~~~~~~~~~~~~~~~~~~~-~~~ll~~~-~~~~ai~~~--nD~~A~g~~ 209 (288)
T 1gud_A 134 GEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDV-ATNVLQRN-PNIKAIYCA--NDTMAMGVA 209 (288)
T ss_dssp EEEEEEECSTTCHHHHHHHHHHHHHHHTCTTEEEEEEEECTTCHHHHHHH-HHHHHHHC-TTCCEEEES--SHHHHHHHH
T ss_pred CEEEEEeCCCCCchHhHHHHHHHHHHHhCCCcEEEEeecCCccHHHHHHH-HHHHHHhC-CCceEEEEC--CCchHHHHH
Confidence 4777775432222 3333344455554343221111112233445543 45666543 568999885 556778999
Q ss_pred HHHHhhC--CCcEEEEEeCCC
Q 025563 202 RFLKEKN--PNIKVYGVEPTE 220 (251)
Q Consensus 202 ~~~~~~~--~~~~vigVep~~ 220 (251)
.++++.+ .++.|+|.+-..
T Consensus 210 ~al~~~G~~~dv~vvGfD~~~ 230 (288)
T 1gud_A 210 QAVANAGKTGKVLVVGTDGIP 230 (288)
T ss_dssp HHHHHTTCTTTSEEEEESCCH
T ss_pred HHHHhcCCCCCeEEEEeCCCH
Confidence 9999875 369999998653
No 338
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=56.38 E-value=45 Score=28.87 Aligned_cols=116 Identities=14% Similarity=0.068 Sum_probs=69.5
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMF 156 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~ 156 (251)
|++ +..-+-|+-|+++|..++.+|++++++-+. .+.......|++. ++ +.++. .++. +...+
T Consensus 160 g~t-vGIIGlG~IG~~vA~~l~~~G~~V~~~d~~----~~~~~~~~~g~~~--~~---~l~el-------l~~a-DiV~l 221 (352)
T 3gg9_A 160 GQT-LGIFGYGKIGQLVAGYGRAFGMNVLVWGRE----NSKERARADGFAV--AE---SKDAL-------FEQS-DVLSV 221 (352)
T ss_dssp TCE-EEEECCSHHHHHHHHHHHHTTCEEEEECSH----HHHHHHHHTTCEE--CS---SHHHH-------HHHC-SEEEE
T ss_pred CCE-EEEEeECHHHHHHHHHHHhCCCEEEEECCC----CCHHHHHhcCceE--eC---CHHHH-------HhhC-CEEEE
Confidence 444 777788999999999999999998776432 2334556678752 22 23332 3333 45554
Q ss_pred CCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHH--HHHHHHHHhhCCCcEEEEEeC
Q 025563 157 RQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTV--TGSGRFLKEKNPNIKVYGVEP 218 (251)
Q Consensus 157 ~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~--~Gi~~~~~~~~~~~~vigVep 218 (251)
.--.++... ..+..+.+.++ +++.+++-+|.|+.. ..+..++++.. +.=.+.+.
T Consensus 222 ~~Plt~~t~----~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~g~--i~gA~lDV 277 (352)
T 3gg9_A 222 HLRLNDETR----SIITVADLTRM--KPTALFVNTSRAELVEENGMVTALNRGR--PGMAAIDV 277 (352)
T ss_dssp CCCCSTTTT----TCBCHHHHTTS--CTTCEEEECSCGGGBCTTHHHHHHHHTS--SSEEEECC
T ss_pred eccCcHHHH----HhhCHHHHhhC--CCCcEEEECCCchhhcHHHHHHHHHhCC--ccEEEecc
Confidence 322222211 12334666666 468999999998864 45666776533 44344443
No 339
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=56.19 E-value=75 Score=25.82 Aligned_cols=55 Identities=29% Similarity=0.279 Sum_probs=39.8
Q ss_pred CeEEEEeccChHHHHHHHHHHHCC-CcEEEEecCCCcHHHHHHHHHcCCEEEEeCCC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRG-YKLIIVMPSIASMERRIVLRALGAEVYLADQA 133 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G-~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~ 133 (251)
++.+|+..+|+.|.+++......| .+++++...... .....+...|++++..+-.
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~-~~~~~l~~~~~~~~~~D~~ 61 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRK-KAAKELRLQGAEVVQGDQD 61 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTS-HHHHHHHHTTCEEEECCTT
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCC-HHHHHHHHCCCEEEEecCC
Confidence 345888888999999999888878 888887765433 2234455678888877643
No 340
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=56.02 E-value=67 Score=28.28 Aligned_cols=36 Identities=33% Similarity=0.539 Sum_probs=29.5
Q ss_pred CCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecC
Q 025563 74 ITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPS 110 (251)
Q Consensus 74 ~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~ 110 (251)
+.++++ |...++|..|+.++.+|+++|++++++-+.
T Consensus 32 ~~~~~~-IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~ 67 (419)
T 4e4t_A 32 ILPGAW-LGMVGGGQLGRMFCFAAQSMGYRVAVLDPD 67 (419)
T ss_dssp CCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCCE-EEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 345565 777788999999999999999998887554
No 341
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=55.88 E-value=73 Score=29.67 Aligned_cols=70 Identities=19% Similarity=0.182 Sum_probs=47.1
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCCh-HHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGF-EGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~-~~~~~~a~~~~~~ 149 (251)
|++.+|+..++--|+++|....+.|.++++. .........+.++..|.+++.+.. |. .+..+..++..++
T Consensus 322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~-~~~~~~~~~~~i~~~g~~~~~~~~--Dv~~~~~~~~~~~~~~ 392 (604)
T 2et6_A 322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVVN-DFKDATKTVDEIKAAGGEAWPDQH--DVAKDSEAIIKNVIDK 392 (604)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEE-CSSCCHHHHHHHHHTTCEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred CCeEEEECcchHHHHHHHHHHHHCCCEEEEE-eCccHHHHHHHHHhcCCeEEEEEc--ChHHHHHHHHHHHHHh
Confidence 4566778888889999999999999987664 323334556677778888877654 45 4444444444443
No 342
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=55.86 E-value=85 Score=25.84 Aligned_cols=32 Identities=19% Similarity=0.219 Sum_probs=23.1
Q ss_pred eEEEEeccChHH---HHHHHHHHHCCCcEEEEecC
Q 025563 79 SVLIETTGGNTG---IGLAFIAALRGYKLIIVMPS 110 (251)
Q Consensus 79 ~~vv~~ssGN~g---~alA~~a~~~G~~~~ivvp~ 110 (251)
..+|.++.||.| .++|...+..|+++.++.+.
T Consensus 87 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 87 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEec
Confidence 457788888877 45555556679999998753
No 343
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=55.84 E-value=42 Score=29.30 Aligned_cols=36 Identities=14% Similarity=0.147 Sum_probs=28.5
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA 112 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~ 112 (251)
|.+..+..-.+|.+++++.++.++|++++++.|+.-
T Consensus 153 glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~ 188 (355)
T 4a8p_A 153 DCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGF 188 (355)
T ss_dssp GCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred CCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCcc
Confidence 344344444589999999999999999999999864
No 344
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=55.59 E-value=49 Score=26.70 Aligned_cols=64 Identities=25% Similarity=0.188 Sum_probs=41.9
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
++.+|+..+|--|+++|....+.|.+++++........ .+..+.++-. +.++..+..++..++.
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~Dl~-d~~~v~~~~~~~~~~~ 85 (253)
T 2nm0_A 22 RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE--------GFLAVKCDIT-DTEQVEQAYKEIEETH 85 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------TSEEEECCTT-SHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc--------cceEEEecCC-CHHHHHHHHHHHHHHc
Confidence 55688888899999999999999998877764322111 1556666654 4455555555554443
No 345
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=55.42 E-value=75 Score=25.08 Aligned_cols=46 Identities=17% Similarity=0.138 Sum_probs=34.3
Q ss_pred HHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhC---CCcEEEEEeCC
Q 025563 172 TGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKN---PNIKVYGVEPT 219 (251)
Q Consensus 172 ~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~---~~~~vigVep~ 219 (251)
...+++++-..++|+|||. +...+.|+..++++.+ .++.|+|.+-.
T Consensus 169 ~~~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~g~vp~di~vvg~d~~ 217 (272)
T 3o74_A 169 LMQQLIDDLGGLPDALVTT--SYVLLQGVFDTLQARPVDSRQLQLGTFGDN 217 (272)
T ss_dssp HHHHHHHHHTSCCSEEEES--SHHHHHHHHHHHHTSCGGGCCCEEEEESCC
T ss_pred HHHHHHhcCCCCCcEEEEe--CchHHHHHHHHHHHcCCCccceEEEEeCCh
Confidence 3456665542268999884 5677889999999987 57999999865
No 346
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=55.29 E-value=49 Score=27.67 Aligned_cols=80 Identities=16% Similarity=0.161 Sum_probs=45.1
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHhhcCCCeEecCCC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQ-AGGFEGILRKGEEILSNTPNGFMFRQF 159 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~ 159 (251)
++..++|..+..++..+- .+-.-.|+++...-..-...++..|++++.++- ..++ -..+..++..+.....+++..-
T Consensus 85 v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~~~~~v~~~~p 162 (365)
T 3get_A 85 IIIGAGSDQVIEFAIHSK-LNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHKDEIKLIFLCLP 162 (365)
T ss_dssp EEEESSHHHHHHHHHHHH-CCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTTTTEEEEEEESS
T ss_pred EEECCCHHHHHHHHHHHH-hCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhCCCCCEEEEcCC
Confidence 677777777776665543 222234455554444556678889999999985 3344 3333344444433456666433
Q ss_pred CCC
Q 025563 160 ENP 162 (251)
Q Consensus 160 ~n~ 162 (251)
.||
T Consensus 163 ~np 165 (365)
T 3get_A 163 NNP 165 (365)
T ss_dssp CTT
T ss_pred CCC
Confidence 343
No 347
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=55.10 E-value=58 Score=29.63 Aligned_cols=55 Identities=27% Similarity=0.273 Sum_probs=40.9
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC-----CcHHHHHHHHHcCCEEEEeCC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI-----ASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~-----~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
++.+|+..+|--|.++|..-.+.|.+.++++... ......+.++..|+++..+..
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~ 299 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAAC 299 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEc
Confidence 6678888889999999999889999666655432 123456778889998877653
No 348
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=54.97 E-value=36 Score=27.20 Aligned_cols=33 Identities=15% Similarity=0.135 Sum_probs=27.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
+++.+|+..+|--|.++|....+.|.+++++..
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r 39 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDL 39 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 345688888899999999999999998777654
No 349
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=54.77 E-value=38 Score=28.30 Aligned_cols=49 Identities=18% Similarity=0.174 Sum_probs=34.8
Q ss_pred CCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEE
Q 025563 76 PGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVY 128 (251)
Q Consensus 76 ~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 128 (251)
.|++ +..-+.|+.|+++|..++.+|.+++++-+. ..+.+.++.+|++++
T Consensus 156 ~g~~-v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~---~~~~~~~~~~g~~~~ 204 (300)
T 2rir_A 156 HGSQ-VAVLGLGRTGMTIARTFAALGANVKVGARS---SAHLARITEMGLVPF 204 (300)
T ss_dssp TTSE-EEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTCEEE
T ss_pred CCCE-EEEEcccHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHCCCeEE
Confidence 4555 677778999999999999999976665432 344454555777654
No 350
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=54.75 E-value=18 Score=29.53 Aligned_cols=24 Identities=33% Similarity=0.477 Sum_probs=21.4
Q ss_pred cChHHHHHHHHHHHCCCcEEEEec
Q 025563 86 GGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 86 sGN~g~alA~~a~~~G~~~~ivvp 109 (251)
||-.|.++|.++...|.+++++..
T Consensus 33 Sg~iG~aiA~~~~~~Ga~V~l~~~ 56 (226)
T 1u7z_A 33 SGKMGFAIAAAAARRGANVTLVSG 56 (226)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccHHHHHHHHHHHHCCCEEEEEEC
Confidence 599999999999999999988753
No 351
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=54.74 E-value=31 Score=27.50 Aligned_cols=34 Identities=29% Similarity=0.352 Sum_probs=27.6
Q ss_pred CCCeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 76 PGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 76 ~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
.+++.+|+..+|--|+++|....+.|.+++++..
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r 46 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGS 46 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC
Confidence 3466688888899999999999999998777654
No 352
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=54.74 E-value=95 Score=26.07 Aligned_cols=106 Identities=17% Similarity=0.134 Sum_probs=65.3
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMF 156 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~ 156 (251)
|++ +..-+.|+-|.++|..++.+|++++++-+.. .. ...+.+|++. + +.++ +.++. +.+.+
T Consensus 142 g~~-vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~-~~---~~~~~~g~~~--~----~l~e-------ll~~a-DvV~l 202 (307)
T 1wwk_A 142 GKT-IGIIGFGRIGYQVAKIANALGMNILLYDPYP-NE---ERAKEVNGKF--V----DLET-------LLKES-DVVTI 202 (307)
T ss_dssp TCE-EEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CH---HHHHHTTCEE--C----CHHH-------HHHHC-SEEEE
T ss_pred Cce-EEEEccCHHHHHHHHHHHHCCCEEEEECCCC-Ch---hhHhhcCccc--c----CHHH-------HHhhC-CEEEE
Confidence 444 7777889999999999999999877665433 22 2345678753 2 2322 22333 45554
Q ss_pred CCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHH--HHHHHHHHhh
Q 025563 157 RQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTV--TGSGRFLKEK 207 (251)
Q Consensus 157 ~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~--~Gi~~~~~~~ 207 (251)
.--.++... ..+..+.+++++ ++.+++-+|.|+.. ..+..++++.
T Consensus 203 ~~p~~~~t~----~li~~~~l~~mk--~ga~lin~arg~~vd~~aL~~aL~~g 249 (307)
T 1wwk_A 203 HVPLVESTY----HLINEERLKLMK--KTAILINTSRGPVVDTNALVKALKEG 249 (307)
T ss_dssp CCCCSTTTT----TCBCHHHHHHSC--TTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred ecCCChHHh----hhcCHHHHhcCC--CCeEEEECCCCcccCHHHHHHHHHhC
Confidence 422222211 122346667773 68999999999864 3777777763
No 353
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=54.59 E-value=56 Score=26.54 Aligned_cols=69 Identities=22% Similarity=0.270 Sum_probs=42.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHH-Hc-CCEEEEeCCCCChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLR-AL-GAEVYLADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~-~~-Ga~v~~v~~~~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|..-.+.|.+++++... ..+.+.+. .. +++.+.++-. +.++..+..++..++
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD---ESGGRALEQELPGAVFILCDVT-QEDDVKTLVSETIRR 79 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHCTTEEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhcCCeEEEcCCC-CHHHHHHHHHHHHHH
Confidence 4566888888999999999999999987766432 23333222 22 3455555543 444444444444443
No 354
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=54.56 E-value=90 Score=25.74 Aligned_cols=95 Identities=13% Similarity=0.005 Sum_probs=52.0
Q ss_pred cCC-EEEEeCCCCCh---HHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHH
Q 025563 123 LGA-EVYLADQAGGF---EGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVT 198 (251)
Q Consensus 123 ~Ga-~v~~v~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~ 198 (251)
.|- +|..+.+..+. .++.+-.++..+++|+.-+..........+.++. ...+++++..+.+|+||| .+...+.
T Consensus 134 ~G~~~I~~i~g~~~~~~~~~R~~Gf~~al~~~pgi~~~~~~~~~~~~~~~~~-~~~~ll~~~~~~~~aI~~--~nd~~A~ 210 (332)
T 2rjo_A 134 GGKGGVVALGGIFSNVPAIERKAGLDAALKKFPGIQLLDFQVADWNSQKAFP-IMQAWMTRFNSKIKGVWA--ANDDMAL 210 (332)
T ss_dssp TTCEEEEEEECCTTCHHHHHHHHHHHHHHHTCTTEEEEEEEECTTCHHHHHH-HHHHHHHHHGGGEEEEEE--SSHHHHH
T ss_pred CCCCeEEEEECCCCCccHHHHHHHHHHHHHhCCCcEEEeeccCCCCHHHHHH-HHHHHHHhcCCCeeEEEE--CCCchHH
Confidence 464 56666543222 2344444555555544322211111122333443 344555541246899887 4556788
Q ss_pred HHHHHHHhhCC--CcEEEEEeCCC
Q 025563 199 GSGRFLKEKNP--NIKVYGVEPTE 220 (251)
Q Consensus 199 Gi~~~~~~~~~--~~~vigVep~~ 220 (251)
|+..++++.+- ++.|+|.+-..
T Consensus 211 g~~~al~~~G~~~di~vvg~D~~~ 234 (332)
T 2rjo_A 211 GAIEALRAEGLAGQIPVTGMDGTQ 234 (332)
T ss_dssp HHHHHHHHTTCBTTBCEECSBCCH
T ss_pred HHHHHHHHcCCCCCCEEEeecCCH
Confidence 99999998764 68899887653
No 355
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=54.54 E-value=82 Score=25.27 Aligned_cols=45 Identities=16% Similarity=0.253 Sum_probs=33.0
Q ss_pred HHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhC-CCcEEEEEeCCC
Q 025563 172 TGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKN-PNIKVYGVEPTE 220 (251)
Q Consensus 172 ~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~-~~~~vigVep~~ 220 (251)
...+++++- +++|+|||.-.. +.|+..++++.+ .++.|+|.+-..
T Consensus 190 ~~~~~l~~~-~~~~ai~~~~d~---a~g~~~al~~~g~~di~vig~d~~~ 235 (304)
T 3gbv_A 190 MLDDFFREH-PDVKHGITFNSK---VYIIGEYLQQRRKSDFSLIGYDLLE 235 (304)
T ss_dssp HHHHHHHHC-TTCCEEEESSSC---THHHHHHHHHTTCCSCEEEEESCCH
T ss_pred HHHHHHHhC-CCeEEEEEcCcc---hHHHHHHHHHcCCCCcEEEEeCCCH
Confidence 344555543 578999987765 458999999987 489999997654
No 356
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=54.48 E-value=26 Score=30.12 Aligned_cols=60 Identities=17% Similarity=0.136 Sum_probs=38.8
Q ss_pred cCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHHHH----HcCCEEEEeC
Q 025563 71 KGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIVLR----ALGAEVYLAD 131 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~v~ 131 (251)
.|.++ |.+..+..-..|.+++++.++.++|++++++.|+.- ++.-++.++ ..|+.+..+.
T Consensus 150 ~g~l~-gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 215 (321)
T 1oth_A 150 YSSLK-GLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTN 215 (321)
T ss_dssp HSCCT-TCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred hCCcC-CcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 35443 444233333367999999999999999999999865 333333333 4676666654
No 357
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=54.37 E-value=51 Score=27.98 Aligned_cols=49 Identities=12% Similarity=0.111 Sum_probs=30.7
Q ss_pred eEEEEeccChHH---HHHHHHHHHCCCcEEEEecCC--CcH---HHHHHHHHcCCEE
Q 025563 79 SVLIETTGGNTG---IGLAFIAALRGYKLIIVMPSI--ASM---ERRIVLRALGAEV 127 (251)
Q Consensus 79 ~~vv~~ssGN~g---~alA~~a~~~G~~~~ivvp~~--~~~---~~~~~~~~~Ga~v 127 (251)
..+|.++.||.| .++|...+..|+++.++.+.. ... ...+.++..|..+
T Consensus 134 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~~~~~~~a~~~~~~~~~~g~~~ 190 (306)
T 3d3j_A 134 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSLFSKTQGQQ 190 (306)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCCCSSCCHHHHHHHHHHHTSSCEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEecCCCCCHHHHHHHHHHHHcCCcc
Confidence 457888888877 455555566799999987642 122 2344455556554
No 358
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=54.14 E-value=38 Score=27.21 Aligned_cols=69 Identities=22% Similarity=0.145 Sum_probs=42.1
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHH-HHHHcCCEEEEe--CCCCChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRI-VLRALGAEVYLA--DQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~-~~~~~Ga~v~~v--~~~~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|....+.|.+++++... ..+.+ ..+.+|.++..+ +-. +.++..+..++..++
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~ 76 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVL---DEEGAATARELGDAARYQHLDVT-IEEDWQRVVAYAREE 76 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTGGGEEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceeEEEecCC-CHHHHHHHHHHHHHH
Confidence 3556888888999999999999999987776533 23332 233345555444 432 444444444444443
No 359
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=54.11 E-value=52 Score=28.34 Aligned_cols=45 Identities=18% Similarity=0.104 Sum_probs=33.5
Q ss_pred ChHHHHHHHHHHHCCCcEEEEecCCCc----HHHHHHHHH------cCCEEEEeC
Q 025563 87 GNTGIGLAFIAALRGYKLIIVMPSIAS----MERRIVLRA------LGAEVYLAD 131 (251)
Q Consensus 87 GN~g~alA~~a~~~G~~~~ivvp~~~~----~~~~~~~~~------~Ga~v~~v~ 131 (251)
.|.+++++.++.++|++++++.|+.-. +.-++.++. .|+++..+.
T Consensus 172 ~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~ 226 (328)
T 3grf_A 172 NNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFH 226 (328)
T ss_dssp SHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEES
T ss_pred cchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEc
Confidence 589999999999999999999998643 333333332 588887765
No 360
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=53.83 E-value=35 Score=27.71 Aligned_cols=69 Identities=23% Similarity=0.189 Sum_probs=42.0
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHH-HHHcCCEEEE--eCCCCChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIV-LRALGAEVYL--ADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~-~~~~Ga~v~~--v~~~~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|--|+++|....+.|.+++++... ..+.+. .+..+.++.. ++-. +.++..+..++..++
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~ 77 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGASLVAVDRE---ERLLAEAVAALEAEAIAVVADVS-DPKAVEAVFAEALEE 77 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTCCSSEEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhcCceEEEEcCCC-CHHHHHHHHHHHHHH
Confidence 3556888888999999999999999987776533 233332 3344444444 4433 444444444444443
No 361
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=53.81 E-value=66 Score=25.78 Aligned_cols=77 Identities=16% Similarity=0.147 Sum_probs=46.7
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCc
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGT 193 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGt 193 (251)
....+.+...|++|+.+..... ....+.++++.++.+..+...+.| ....+ ....+..++.++. +.+|.+|..+|.
T Consensus 36 ~~~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~D-l~~~~-~v~~~~~~~~~~~-g~id~li~nAg~ 111 (267)
T 3gdg_A 36 IEAARGCAEMGAAVAITYASRA-QGAEENVKELEKTYGIKAKAYKCQ-VDSYE-SCEKLVKDVVADF-GQIDAFIANAGA 111 (267)
T ss_dssp HHHHHHHHHTSCEEEECBSSSS-SHHHHHHHHHHHHHCCCEECCBCC-TTCHH-HHHHHHHHHHHHT-SCCSEEEECCCC
T ss_pred HHHHHHHHHCCCeEEEEeCCcc-hhHHHHHHHHHHhcCCceeEEecC-CCCHH-HHHHHHHHHHHHc-CCCCEEEECCCc
Confidence 4557777788999999876421 222344445544333333333332 23332 5566777887776 679999999985
Q ss_pred h
Q 025563 194 G 194 (251)
Q Consensus 194 G 194 (251)
.
T Consensus 112 ~ 112 (267)
T 3gdg_A 112 T 112 (267)
T ss_dssp C
T ss_pred C
Confidence 4
No 362
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=53.78 E-value=1e+02 Score=28.20 Aligned_cols=125 Identities=14% Similarity=0.121 Sum_probs=71.4
Q ss_pred HHHHHHHHCCCcEEE---------EecCCCcH--HHHHHHHHcCCEEEEeCCC---CCh-HHHHHHHHHHhhcCCCeEe-
Q 025563 92 GLAFIAALRGYKLII---------VMPSIASM--ERRIVLRALGAEVYLADQA---GGF-EGILRKGEEILSNTPNGFM- 155 (251)
Q Consensus 92 alA~~a~~~G~~~~i---------vvp~~~~~--~~~~~~~~~Ga~v~~v~~~---~~~-~~~~~~a~~~~~~~~~~~~- 155 (251)
.+..+|+.+|.++++ ..|..+.. .........|++.+.+++. +.| .++.+...+.+++....++
T Consensus 282 ~ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~ 361 (500)
T 1a3w_A 282 KLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAY 361 (500)
T ss_dssp HHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCH
T ss_pred HHHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhh
Confidence 355778899999764 22333322 2334445579999998754 122 3555544443332222111
Q ss_pred c------CC-CCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCCc
Q 025563 156 F------RQ-FENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTESA 222 (251)
Q Consensus 156 ~------~~-~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s~ 222 (251)
- .. ...+..........+.++.++++ ..+||+.+-||.|+ +.+....|...|+++.|....
T Consensus 362 ~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~--a~aIv~~T~sG~ta----~~isr~RP~~pI~a~t~~~~~ 429 (500)
T 1a3w_A 362 LPNYDDMRNCTPKPTSTTETVAASAVAAVFEQK--AKAIIVLSTSGTTP----RLVSKYRPNCPIILVTRCPRA 429 (500)
T ss_dssp HHHHHHHTTSCCSSCCHHHHHHHHHHHHHHHHT--CSCEEEECSSSHHH----HHHHHTCCSSCEEEEESCTTH
T ss_pred hhHHHhhhhccccccchHHHHHHHHHHHHHhcC--CCEEEEECCCchHH----HHHHhhCCCCCEEEEcCCHHH
Confidence 0 01 11111221133444557777773 56999999999985 455556899999999988653
No 363
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=53.71 E-value=47 Score=26.61 Aligned_cols=70 Identities=11% Similarity=0.053 Sum_probs=41.6
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHH-HHHcCCEEEEeCCC-CChHHHHHHHHHHhhc
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIV-LRALGAEVYLADQA-GGFEGILRKGEEILSN 149 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~-~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 149 (251)
+++.+|+..+|.-|+++|....+.|.+++++.. + ..+.+. .+.+|.++..+..+ .+.++..+..++..++
T Consensus 6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (253)
T 1hxh_A 6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI-N--EAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECS-C--HHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-C--HHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 355688888899999999999999998766543 2 233222 23336666555432 2344444444444433
No 364
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=53.51 E-value=41 Score=27.26 Aligned_cols=72 Identities=15% Similarity=0.135 Sum_probs=41.7
Q ss_pred CCeEEEEec--cChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCE--EEEeCCCCChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETT--GGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAE--VYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~s--sGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~--v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
+++.+|+.. +|.-|+++|....+.|.+++++.... .....+..+.++.+ .+.++-. +.++..+..++..++.
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 82 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR-LRLIQRITDRLPAKAPLLELDVQ-NEEHLASLAGRVTEAI 82 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC-HHHHHHHHTTSSSCCCEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh-HHHHHHHHHhcCCCceEEEccCC-CHHHHHHHHHHHHHHh
Confidence 345577776 78899999999999999877654332 22112223344544 4444443 4455555555555443
No 365
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=53.15 E-value=91 Score=25.37 Aligned_cols=46 Identities=15% Similarity=0.243 Sum_probs=33.4
Q ss_pred HHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCC--CcEEEEEeCC
Q 025563 172 TGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNP--NIKVYGVEPT 219 (251)
Q Consensus 172 ~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~--~~~vigVep~ 219 (251)
...+++++.+++||+|||. +...+.|+..++++.+- ++.|+|.+-.
T Consensus 177 ~~~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~G~~~di~vig~d~~ 224 (313)
T 3m9w_A 177 IMENALTANNNKIDAVVAS--NDATAGGAIQALSAQGLSGKVAISGQDAD 224 (313)
T ss_dssp HHHHHHHHTTTCCCEEEES--SHHHHHHHHHHHHTTTCTTTSEECCCSCC
T ss_pred HHHHHHHhCCCCeeEEEEC--CCchHHHHHHHHHHcCCCCCcEEEecCCC
Confidence 3445665543579999886 55677799999998764 5889998753
No 366
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=53.14 E-value=24 Score=27.83 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=26.6
Q ss_pred CeEEEEeccChHHHHHHHHHHHCC--CcEEEEecC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRG--YKLIIVMPS 110 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G--~~~~ivvp~ 110 (251)
++.+|+..+|.-|.+++....+.| .+++++...
T Consensus 4 k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred CEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecC
Confidence 455888888999999999999999 887776643
No 367
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=53.06 E-value=83 Score=25.33 Aligned_cols=74 Identities=20% Similarity=0.255 Sum_probs=43.8
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCC--CeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEec
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTP--NGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGI 191 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~v 191 (251)
....+.+...||+|+.++.. ++..+.+.+..++.+ ...++ +.| -...+ ....+..++.++. +.+|.+|..+
T Consensus 22 ~aiA~~la~~Ga~Vvi~~r~---~~~~~~~~~~~~~~~~~~~~~~-~~D-v~~~~-~v~~~~~~~~~~~-G~iD~lvnnA 94 (256)
T 4fs3_A 22 FGVAKVLDQLGAKLVFTYRK---ERSRKELEKLLEQLNQPEAHLY-QID-VQSDE-EVINGFEQIGKDV-GNIDGVYHSI 94 (256)
T ss_dssp HHHHHHHHHTTCEEEEEESS---GGGHHHHHHHHGGGTCSSCEEE-ECC-TTCHH-HHHHHHHHHHHHH-CCCSEEEECC
T ss_pred HHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHhcCCCcEEEE-Ecc-CCCHH-HHHHHHHHHHHHh-CCCCEEEecc
Confidence 45677788899999999874 222333333333321 22222 222 22232 4455666777777 6799999998
Q ss_pred Cch
Q 025563 192 GTG 194 (251)
Q Consensus 192 GtG 194 (251)
|..
T Consensus 95 g~~ 97 (256)
T 4fs3_A 95 AFA 97 (256)
T ss_dssp CCC
T ss_pred ccc
Confidence 853
No 368
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=53.01 E-value=80 Score=24.66 Aligned_cols=48 Identities=17% Similarity=0.132 Sum_probs=32.6
Q ss_pred EEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHH-HHHcCCEEEEe
Q 025563 80 VLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIV-LRALGAEVYLA 130 (251)
Q Consensus 80 ~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~-~~~~Ga~v~~v 130 (251)
.+|+..+|--|.++|..-...|.+++++... ..+++. .+.++.++..+
T Consensus 4 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~ 52 (230)
T 3guy_A 4 IVITGASSGLGAELAKLYDAEGKATYLTGRS---ESKLSTVTNCLSNNVGYR 52 (230)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCCEEEEESC---HHHHHHHHHTCSSCCCEE
T ss_pred EEEecCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHhhccCeE
Confidence 4888888999999999999999997666432 333333 34445554443
No 369
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=52.99 E-value=52 Score=28.67 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=31.7
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHHHH
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA--SMERRIVLR 121 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~~~ 121 (251)
|.+..+..-.-|.+++++.++.++|++++++.|+.. ++.-++.++
T Consensus 188 glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~ 234 (353)
T 3sds_A 188 GLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQ 234 (353)
T ss_dssp TCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHH
Confidence 445333344467899999999999999999999864 444444443
No 370
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=52.93 E-value=43 Score=28.93 Aligned_cols=34 Identities=32% Similarity=0.440 Sum_probs=28.8
Q ss_pred CCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecC
Q 025563 76 PGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPS 110 (251)
Q Consensus 76 ~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~ 110 (251)
++++ |..-++|..|+.++.+++++|++++++-+.
T Consensus 11 ~~~~-IlIlG~G~lg~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 11 FGAT-IGIIGGGQLGKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp TTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCE-EEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4455 777888999999999999999999888654
No 371
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=52.90 E-value=41 Score=28.10 Aligned_cols=50 Identities=12% Similarity=0.048 Sum_probs=33.3
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLAD 131 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~ 131 (251)
++..++|..+..++..+- +.-.-.|+++...-......++..|++++.++
T Consensus 72 v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~ 121 (371)
T 2e7j_A 72 ARVTNGAREAKFAVMHSL-AKKDAWVVMDENCHYSSYVAAERAGLNIALVP 121 (371)
T ss_dssp EEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHHHHHHHHHTTCEEEEEC
T ss_pred EEEeCChHHHHHHHHHHH-hCCCCEEEEccCcchHHHHHHHHcCCeEEEee
Confidence 666666667766666554 22233556666555666666888999999998
No 372
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=52.86 E-value=40 Score=27.33 Aligned_cols=32 Identities=13% Similarity=0.295 Sum_probs=26.7
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
++.+|+..+|--|+++|....+.|.+++++..
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 45588888899999999999999998877654
No 373
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=52.85 E-value=37 Score=27.93 Aligned_cols=71 Identities=13% Similarity=0.131 Sum_probs=42.2
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc-HHHHHHHHHcCC---EEEEeCCCCChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS-MERRIVLRALGA---EVYLADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga---~v~~v~~~~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|.++|..-.+.|.+++++...... ....+.++..+. ..+.+|-. +.++..+..++..++
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 108 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVG-DPDQVAALFAAVRAE 108 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCC-CHHHHHHHHHHHHHH
Confidence 455788888889999999999999987776533211 122333333332 34445543 455555555555544
No 374
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=52.80 E-value=99 Score=26.29 Aligned_cols=105 Identities=21% Similarity=0.145 Sum_probs=62.8
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMF 156 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~ 156 (251)
|.+ +..-+.|+.|.++|..++.+|++++++-+.. .. +..+.+|++. . +.++. .++. +.+.+
T Consensus 150 g~~-vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~-~~---~~~~~~g~~~--~----~l~~~-------l~~a-DvVil 210 (334)
T 2dbq_A 150 GKT-IGIIGLGRIGQAIAKRAKGFNMRILYYSRTR-KE---EVERELNAEF--K----PLEDL-------LRES-DFVVL 210 (334)
T ss_dssp TCE-EEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CH---HHHHHHCCEE--C----CHHHH-------HHHC-SEEEE
T ss_pred CCE-EEEEccCHHHHHHHHHHHhCCCEEEEECCCc-ch---hhHhhcCccc--C----CHHHH-------HhhC-CEEEE
Confidence 444 7777889999999999999999877665433 22 2334456542 1 23322 2332 45554
Q ss_pred CCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHH--HHHHHHHh
Q 025563 157 RQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVT--GSGRFLKE 206 (251)
Q Consensus 157 ~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~--Gi~~~~~~ 206 (251)
.--.++..- + .+..++.+.++ ++.+++-++.|+... .+..+++.
T Consensus 211 ~vp~~~~t~--~--~i~~~~~~~mk--~~ailIn~srg~~v~~~aL~~aL~~ 256 (334)
T 2dbq_A 211 AVPLTRETY--H--LINEERLKLMK--KTAILINIARGKVVDTNALVKALKE 256 (334)
T ss_dssp CCCCCTTTT--T--CBCHHHHHHSC--TTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCCCChHHH--H--hhCHHHHhcCC--CCcEEEECCCCcccCHHHHHHHHHh
Confidence 322222111 1 12235666663 578889999998665 67777776
No 375
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=52.74 E-value=47 Score=26.27 Aligned_cols=33 Identities=24% Similarity=0.258 Sum_probs=26.8
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
+++.+|+..+|.-|.++|..-.+.|.+++++..
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGR 38 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 345688888899999999999999998777654
No 376
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=52.70 E-value=95 Score=25.44 Aligned_cols=117 Identities=9% Similarity=0.053 Sum_probs=64.0
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHc-----------C--C----------EEEEeCCCCChH
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRAL-----------G--A----------EVYLADQAGGFE 137 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~-----------G--a----------~v~~v~~~~~~~ 137 (251)
|..-++|+.|.++|...+..|++++++- .++.+++..+.. | . .+.... ++.
T Consensus 7 V~VIGaG~mG~~iA~~la~~G~~V~l~d---~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~---~~~ 80 (283)
T 4e12_A 7 VTVLGTGVLGSQIAFQTAFHGFAVTAYD---INTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSD---DLA 80 (283)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEC---SSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEES---CHH
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEe---CCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeC---CHH
Confidence 5566789999999999999999887763 233333332221 1 1 111111 111
Q ss_pred HHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEe
Q 025563 138 GILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVE 217 (251)
Q Consensus 138 ~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVe 217 (251)
+..++. +.+...- +.+.+ -...+..++.+.+ .++.+++...++-...-+...+.. .-+++++.
T Consensus 81 -------~~~~~a-DlVi~av---~~~~~-~~~~v~~~l~~~~--~~~~il~s~tS~~~~~~la~~~~~---~~~~ig~h 143 (283)
T 4e12_A 81 -------QAVKDA-DLVIEAV---PESLD-LKRDIYTKLGELA--PAKTIFATNSSTLLPSDLVGYTGR---GDKFLALH 143 (283)
T ss_dssp -------HHTTTC-SEEEECC---CSCHH-HHHHHHHHHHHHS--CTTCEEEECCSSSCHHHHHHHHSC---GGGEEEEE
T ss_pred -------HHhccC-CEEEEec---cCcHH-HHHHHHHHHHhhC--CCCcEEEECCCCCCHHHHHhhcCC---CcceEEEc
Confidence 122222 4444432 22221 2234445665554 467888877777766666555532 24778887
Q ss_pred CCC
Q 025563 218 PTE 220 (251)
Q Consensus 218 p~~ 220 (251)
+..
T Consensus 144 ~~~ 146 (283)
T 4e12_A 144 FAN 146 (283)
T ss_dssp ECS
T ss_pred cCC
Confidence 764
No 377
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=52.60 E-value=70 Score=28.54 Aligned_cols=51 Identities=24% Similarity=0.312 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecC
Q 025563 59 RIALSMIKDAEE-KGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPS 110 (251)
Q Consensus 59 R~a~~~l~~a~~-~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~ 110 (251)
|++.+.+..+.+ .|.--.|++ ++..+.||-|..+|....++|.+++.+.+.
T Consensus 199 ~Gv~~~~~~~~~~~g~~l~gk~-vaVqG~GnVG~~~a~~L~~~GakVVavsD~ 250 (419)
T 3aoe_E 199 LGALLVLEALAKRRGLDLRGAR-VVVQGLGQVGAAVALHAERLGMRVVAVATS 250 (419)
T ss_dssp HHHHHHHHHHHHHHTCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred HHHHHHHHHHHHhcCCCccCCE-EEEECcCHHHHHHHHHHHHCCCEEEEEEcC
Confidence 577777777554 454223555 888889999999999999999998866543
No 378
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=52.48 E-value=90 Score=25.40 Aligned_cols=71 Identities=18% Similarity=0.244 Sum_probs=45.8
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCc
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGT 193 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGt 193 (251)
....+.+...|++|+.++.. . +.+.+.+++.++..++ +. +-...+ ....+..++.++. +.+|.+|-.+|.
T Consensus 16 ~aia~~la~~Ga~V~~~~~~--~----~~~~~~~~~~~~~~~~-~~-Dv~~~~-~v~~~v~~~~~~~-g~iDiLVNNAG~ 85 (247)
T 3ged_A 16 KQICLDFLEAGDKVCFIDID--E----KRSADFAKERPNLFYF-HG-DVADPL-TLKKFVEYAMEKL-QRIDVLVNNACR 85 (247)
T ss_dssp HHHHHHHHHTTCEEEEEESC--H----HHHHHHHTTCTTEEEE-EC-CTTSHH-HHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEeCC--H----HHHHHHHHhcCCEEEE-Ee-cCCCHH-HHHHHHHHHHHHc-CCCCEEEECCCC
Confidence 45567778899999999874 1 2234455555444443 22 223332 5566777888888 679999999875
Q ss_pred h
Q 025563 194 G 194 (251)
Q Consensus 194 G 194 (251)
+
T Consensus 86 ~ 86 (247)
T 3ged_A 86 G 86 (247)
T ss_dssp C
T ss_pred C
Confidence 4
No 379
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=52.21 E-value=88 Score=24.91 Aligned_cols=37 Identities=11% Similarity=-0.048 Sum_probs=29.2
Q ss_pred CCCCEEEEecCchhHHHHHHHHHHhhC----CCcEEEEEeCCC
Q 025563 182 GDVDILVAGIGTGGTVTGSGRFLKEKN----PNIKVYGVEPTE 220 (251)
Q Consensus 182 ~~~d~vv~~vGtGg~~~Gi~~~~~~~~----~~~~vigVep~~ 220 (251)
+.||+||| .+...+.|+..++++.+ .++.|+|.+-..
T Consensus 180 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vig~d~~~ 220 (276)
T 3jy6_A 180 DQKTVAFA--LKERWLLEFFPNLIISGLIDNQTVTATGFADTD 220 (276)
T ss_dssp SSCEEEEE--SSHHHHHHHSHHHHHSSSCCSSSEEEEEBCCCS
T ss_pred CCCcEEEE--eCcHHHHHHHHHHHHcCCCCCCcEEEEEECChH
Confidence 57899987 46677889999999986 358899987653
No 380
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=52.14 E-value=65 Score=26.04 Aligned_cols=74 Identities=14% Similarity=0.162 Sum_probs=44.3
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhc-CCCeEec-CCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEec
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSN-TPNGFMF-RQFENPANPKIHYETTGPEIWKDSGGDVDILVAGI 191 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~-~~~~~~~-~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~v 191 (251)
....+.+...|++|+.++.. .+...+.+.++.++ .....++ ....++. ....+..++.++. +.+|.+|..+
T Consensus 34 ~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~----~v~~~~~~~~~~~-g~id~lv~nA 106 (266)
T 4egf_A 34 ADIARAFAAAGARLVLSGRD--VSELDAARRALGEQFGTDVHTVAIDLAEPD----APAELARRAAEAF-GGLDVLVNNA 106 (266)
T ss_dssp HHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHCCCEEEEECCTTSTT----HHHHHHHHHHHHH-TSCSEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHhcCCcEEEEEecCCCHH----HHHHHHHHHHHHc-CCCCEEEECC
Confidence 45567777889999999874 33444444444442 2122222 2223333 3345666777777 5799999999
Q ss_pred Cch
Q 025563 192 GTG 194 (251)
Q Consensus 192 GtG 194 (251)
|..
T Consensus 107 g~~ 109 (266)
T 4egf_A 107 GIS 109 (266)
T ss_dssp CCC
T ss_pred CcC
Confidence 864
No 381
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=52.06 E-value=59 Score=28.57 Aligned_cols=110 Identities=16% Similarity=0.191 Sum_probs=52.0
Q ss_pred cEEEEecCCCcHHHHHHHHHcC-CEEEEeCCCCChHH--HHHHHHHHhhcCCCe-E-ecCC-CCCCchHHHHHhhHHHHH
Q 025563 103 KLIIVMPSIASMERRIVLRALG-AEVYLADQAGGFEG--ILRKGEEILSNTPNG-F-MFRQ-FENPANPKIHYETTGPEI 176 (251)
Q Consensus 103 ~~~ivvp~~~~~~~~~~~~~~G-a~v~~v~~~~~~~~--~~~~a~~~~~~~~~~-~-~~~~-~~n~~~~~~g~~t~~~EI 176 (251)
+..++.-.+.-...-+.++.+| -++..|-+...+.. ..+...+..++. +. + ..+. -.||..- ...-+.+.
T Consensus 21 p~~i~~G~g~l~~l~~~l~~~g~~r~liVtd~~~~~~~g~~~~v~~~L~~~-g~~~~~f~~v~~~p~~~---~v~~~~~~ 96 (407)
T 1vlj_A 21 PTKIVFGRGTIPKIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKH-GIEWVEVSGVKPNPVLS---KVHEAVEV 96 (407)
T ss_dssp CCEEEESTTCGGGHHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHT-TCEEEEECCCCSSCBHH---HHHHHHHH
T ss_pred CCeEEECcCHHHHHHHHHHHcCCCeEEEEECchHHhhccHHHHHHHHHHHc-CCeEEEecCccCCCCHH---HHHHHHHH
Confidence 4445554444344445566677 56655543212332 244444444433 32 2 1221 1233321 12222233
Q ss_pred hhhhCCCCCEEEEecCchhHHHHHHHHHHhh-----------------CCCcEEEEEeCCC
Q 025563 177 WKDSGGDVDILVAGIGTGGTVTGSGRFLKEK-----------------NPNIKVYGVEPTE 220 (251)
Q Consensus 177 ~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~-----------------~~~~~vigVep~~ 220 (251)
+.+ .++| +|+++|+|+.+ -++++.... .+.++++.|-...
T Consensus 97 ~~~--~~~D-~IIavGGGsvi-D~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTa 153 (407)
T 1vlj_A 97 AKK--EKVE-AVLGVGGGSVV-DSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTIS 153 (407)
T ss_dssp HHH--TTCS-EEEEEESHHHH-HHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSC
T ss_pred HHh--cCCC-EEEEeCChhHH-HHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 333 2455 66789988854 555555442 1457888886653
No 382
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=52.00 E-value=87 Score=24.78 Aligned_cols=74 Identities=18% Similarity=0.200 Sum_probs=45.8
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCc
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGT 193 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGt 193 (251)
....+.+...|++|+.++.. .+...+..+++.+.. +....-+. +..+.+ ....+..++.++. +.+|.+|..+|.
T Consensus 23 ~~~a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~-~~~~~~~~-D~~~~~-~~~~~~~~~~~~~-g~id~li~~Ag~ 96 (253)
T 3qiv_A 23 QAYAEALAREGAAVVVADIN--AEAAEAVAKQIVADG-GTAISVAV-DVSDPE-SAKAMADRTLAEF-GGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTT-CEEEEEEC-CTTSHH-HHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEcCC--HHHHHHHHHHHHhcC-CcEEEEEc-cCCCHH-HHHHHHHHHHHHc-CCCCEEEECCCc
Confidence 45567777889999999874 334444445554443 33322232 223332 4556667777777 579999999986
No 383
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=51.98 E-value=53 Score=22.27 Aligned_cols=49 Identities=16% Similarity=0.244 Sum_probs=34.0
Q ss_pred EEEeccChHHHHHHHHHHHCC-CcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 81 LIETTGGNTGIGLAFIAALRG-YKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G-~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
++..++|..|.+++......| .+++++.. ++.+.+.++..|.+++..+-
T Consensus 8 v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~~~~~~~~~~d~ 57 (118)
T 3ic5_A 8 ICVVGAGKIGQMIAALLKTSSNYSVTVADH---DLAALAVLNRMGVATKQVDA 57 (118)
T ss_dssp EEEECCSHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHHTTTCEEEECCT
T ss_pred EEEECCCHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHHhCCCcEEEecC
Confidence 444445999999999999999 66555433 35666666667777766654
No 384
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=51.94 E-value=87 Score=25.19 Aligned_cols=76 Identities=16% Similarity=0.171 Sum_probs=45.7
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCe-EecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecC
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNG-FMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIG 192 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vG 192 (251)
....+.+...|++|+.++.. .+...+...++.++.++. ....+.| ..... ....+..++.++. +.+|.+|..+|
T Consensus 22 ~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~D-v~~~~-~v~~~~~~~~~~~-g~id~lvnnAg 96 (265)
T 3lf2_A 22 LATVELLLEAGAAVAFCARD--GERLRAAESALRQRFPGARLFASVCD-VLDAL-QVRAFAEACERTL-GCASILVNNAG 96 (265)
T ss_dssp HHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHSTTCCEEEEECC-TTCHH-HHHHHHHHHHHHH-CSCSEEEECCC
T ss_pred HHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHhcCCceEEEEeCC-CCCHH-HHHHHHHHHHHHc-CCCCEEEECCC
Confidence 45567777889999999874 334444445554433332 2222222 22232 4455666777777 57999999998
Q ss_pred ch
Q 025563 193 TG 194 (251)
Q Consensus 193 tG 194 (251)
..
T Consensus 97 ~~ 98 (265)
T 3lf2_A 97 QG 98 (265)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 385
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=51.89 E-value=90 Score=25.07 Aligned_cols=76 Identities=14% Similarity=0.108 Sum_probs=45.2
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCc
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGT 193 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGt 193 (251)
....+.+...|++|+.++.. .+...+.+.++.+..++....-+. +-...+ ....+..++.++. +.+|.+|..+|.
T Consensus 24 ~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~-Dv~~~~-~v~~~~~~~~~~~-g~id~lvnnAg~ 98 (262)
T 3pk0_A 24 RGIATVFARAGANVAVAGRS--TADIDACVADLDQLGSGKVIGVQT-DVSDRA-QCDALAGRAVEEF-GGIDVVCANAGV 98 (262)
T ss_dssp HHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHTTSSSCEEEEEC-CTTSHH-HHHHHHHHHHHHH-SCCSEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhhCCCcEEEEEc-CCCCHH-HHHHHHHHHHHHh-CCCCEEEECCCC
Confidence 35566777889999999874 334444445554432122222222 222332 4456667777777 579999999985
Q ss_pred h
Q 025563 194 G 194 (251)
Q Consensus 194 G 194 (251)
.
T Consensus 99 ~ 99 (262)
T 3pk0_A 99 F 99 (262)
T ss_dssp C
T ss_pred C
Confidence 4
No 386
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=51.74 E-value=43 Score=25.88 Aligned_cols=50 Identities=12% Similarity=0.169 Sum_probs=37.4
Q ss_pred EEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 80 VLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 80 ~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
.+|+..+|..|.+++......|.+++++... +.+...+...+.+++..+-
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~---~~~~~~~~~~~~~~~~~D~ 52 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRD---PQKAADRLGATVATLVKEP 52 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHTCTTSEEEECCG
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEec---ccccccccCCCceEEeccc
Confidence 4788888999999999999999998888653 3444444445777776653
No 387
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=51.28 E-value=95 Score=25.01 Aligned_cols=45 Identities=20% Similarity=0.370 Sum_probs=33.0
Q ss_pred HHHHhhhhC-CCCCEEEEecCchhHHHHHHHHHHhhCC-CcEEEEEeCC
Q 025563 173 GPEIWKDSG-GDVDILVAGIGTGGTVTGSGRFLKEKNP-NIKVYGVEPT 219 (251)
Q Consensus 173 ~~EI~~q~~-~~~d~vv~~vGtGg~~~Gi~~~~~~~~~-~~~vigVep~ 219 (251)
..+++++.. ..||+|||. +...+.|+..++++.+. ++.|+|.+-.
T Consensus 192 ~~~~l~~~~~~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vig~d~~ 238 (309)
T 2fvy_A 192 MDAWLSGPNANKIEVVIAN--NDAMAMGAVEALKAHNKSSIPVFGVDAL 238 (309)
T ss_dssp HHHHHTSTTGGGCCEEEES--SHHHHHHHHHHHHHTTCTTSCEECSBCC
T ss_pred HHHHHHhCCCCCccEEEEC--CchhHHHHHHHHHHcCCCCceEEecCCC
Confidence 445554432 268999874 56677899999999887 8999998754
No 388
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=51.14 E-value=89 Score=24.98 Aligned_cols=74 Identities=19% Similarity=0.186 Sum_probs=43.7
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCc
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGT 193 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGt 193 (251)
....+.+...|++|+.++.. .+...+...++.+ .++....-+. +....+ ....+..++.++. +.+|.+|..+|.
T Consensus 20 ~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~-~~~~~~~~~~-Dv~~~~-~v~~~~~~~~~~~-g~id~lv~nAg~ 93 (257)
T 3imf_A 20 KGMATRFAKEGARVVITGRT--KEKLEEAKLEIEQ-FPGQILTVQM-DVRNTD-DIQKMIEQIDEKF-GRIDILINNAAG 93 (257)
T ss_dssp HHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHCC-STTCEEEEEC-CTTCHH-HHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHh-cCCcEEEEEc-cCCCHH-HHHHHHHHHHHHc-CCCCEEEECCCC
Confidence 35566777789999999874 3333333344433 3233222222 222332 4456667777777 579999999984
No 389
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=51.12 E-value=97 Score=26.96 Aligned_cols=117 Identities=14% Similarity=0.112 Sum_probs=71.7
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMF 156 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~ 156 (251)
|++ +-.-+-|+-|+++|..++.+|++++.+-+.. .. ......|++. . +.+ ++.++. +.+.+
T Consensus 176 gkt-vGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~-~~---~~~~~~g~~~--~----~l~-------ell~~a-DvV~l 236 (365)
T 4hy3_A 176 GSE-IGIVGFGDLGKALRRVLSGFRARIRVFDPWL-PR---SMLEENGVEP--A----SLE-------DVLTKS-DFIFV 236 (365)
T ss_dssp SSE-EEEECCSHHHHHHHHHHTTSCCEEEEECSSS-CH---HHHHHTTCEE--C----CHH-------HHHHSC-SEEEE
T ss_pred CCE-EEEecCCcccHHHHHhhhhCCCEEEEECCCC-CH---HHHhhcCeee--C----CHH-------HHHhcC-CEEEE
Confidence 444 7778889999999999999999987765542 22 2344567652 1 222 334443 55555
Q ss_pred CCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHH--HHHHHHHHhhCCCcEEEEEeCCCC
Q 025563 157 RQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTV--TGSGRFLKEKNPNIKVYGVEPTES 221 (251)
Q Consensus 157 ~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~--~Gi~~~~~~~~~~~~vigVep~~s 221 (251)
.--.++... .-+..+.++++ +++.+++-+|.|+.. ..+..++++ .++. .+.+....
T Consensus 237 ~~Plt~~T~----~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~--g~i~-aaLDV~~~ 294 (365)
T 4hy3_A 237 VAAVTSENK----RFLGAEAFSSM--RRGAAFILLSRADVVDFDALMAAVSS--GHIV-AASDVYPE 294 (365)
T ss_dssp CSCSSCC-------CCCHHHHHTS--CTTCEEEECSCGGGSCHHHHHHHHHT--TSSE-EEESCCSS
T ss_pred cCcCCHHHH----hhcCHHHHhcC--CCCcEEEECcCCchhCHHHHHHHHHc--CCce-EEeeCCCC
Confidence 422232221 22345677777 468999999999874 455666664 3466 56665543
No 390
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=50.98 E-value=36 Score=30.51 Aligned_cols=51 Identities=25% Similarity=0.191 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHc-CCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecC
Q 025563 59 RIALSMIKDAEEK-GLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPS 110 (251)
Q Consensus 59 R~a~~~l~~a~~~-g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~ 110 (251)
|+..+.+..+.+. |.--.|.+ |+..+.||-|..+|.....+|.+++.+.+.
T Consensus 202 ~Gv~~~~~~~~~~~g~~l~g~~-vaVqG~GnVG~~aa~~l~e~GakVVavsD~ 253 (424)
T 3k92_A 202 QGVTICIEEAVKKKGIKLQNAR-IIIQGFGNAGSFLAKFMHDAGAKVIGISDA 253 (424)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCE-EEEECCSHHHHHHHHHHHHHTCEEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCcccCE-EEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4667777766543 43223444 888889999999999999999998876643
No 391
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=50.64 E-value=16 Score=31.20 Aligned_cols=58 Identities=16% Similarity=0.059 Sum_probs=40.6
Q ss_pred cCCCCCCCeEEEEecc---ChHHHHHHHHHHHC-CCcEEEEecCCC-cHHHHHHHHHcCCEEEEeCC
Q 025563 71 KGLITPGKSVLIETTG---GNTGIGLAFIAALR-GYKLIIVMPSIA-SMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ss---GN~g~alA~~a~~~-G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~v~~ 132 (251)
.|.++ |.+ |+..+. +|.+++++.+++++ |++++++.|+.- ++..+ ++..|+++..+..
T Consensus 144 ~g~l~-gl~-va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~--~~~~g~~~~~~~d 206 (299)
T 1pg5_A 144 FNTID-GLV-FALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEI--LDELNYPVKEVEN 206 (299)
T ss_dssp HSCST-TCE-EEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHH--HTTCCSCEEEESC
T ss_pred hCCcC-CcE-EEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHH--HHHcCCeEEEeCC
Confidence 45443 444 444444 79999999999999 999999999864 23333 5677888766653
No 392
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=50.39 E-value=70 Score=27.59 Aligned_cols=115 Identities=17% Similarity=0.127 Sum_probs=68.5
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMF 156 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~ 156 (251)
|++ +-.-+-|+-|.++|..++.+|++++.+-+...+.... .|++. ++ +.+ ++.++. +.+.+
T Consensus 173 gkt-vGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-----~g~~~--~~---~l~-------ell~~s-DvV~l 233 (345)
T 4g2n_A 173 GRR-LGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-----EGAIY--HD---TLD-------SLLGAS-DIFLI 233 (345)
T ss_dssp TCE-EEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-----TTCEE--CS---SHH-------HHHHTC-SEEEE
T ss_pred CCE-EEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-----cCCeE--eC---CHH-------HHHhhC-CEEEE
Confidence 344 7777889999999999999999987775544333221 15442 22 232 333443 55555
Q ss_pred CCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHH--HHHHHHHHhhCCCcEEEEEeC
Q 025563 157 RQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTV--TGSGRFLKEKNPNIKVYGVEP 218 (251)
Q Consensus 157 ~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~--~Gi~~~~~~~~~~~~vigVep 218 (251)
.--.++.. +.-+..+.+.++ +++.+++-++.|+.. ..+..++++. ++.-.+.+.
T Consensus 234 ~~Plt~~T----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~g--~i~gA~LDV 289 (345)
T 4g2n_A 234 AAPGRPEL----KGFLDHDRIAKI--PEGAVVINISRGDLINDDALIEALRSK--HLFAAGLDV 289 (345)
T ss_dssp CSCCCGGG----TTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHHT--SEEEEEESC
T ss_pred ecCCCHHH----HHHhCHHHHhhC--CCCcEEEECCCCchhCHHHHHHHHHhC--CceEEEecC
Confidence 42222221 223445777777 468999999999864 4566666542 244444443
No 393
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=50.31 E-value=96 Score=24.81 Aligned_cols=74 Identities=19% Similarity=0.218 Sum_probs=45.1
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCc
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGT 193 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGt 193 (251)
....+.+...|++|+.++.. .+...+...++.+.. +.....+. +....+ ....+..++.++. +.+|.||..+|.
T Consensus 43 ~~la~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~-~~~~~~~~-D~~~~~-~v~~~~~~~~~~~-g~id~lv~~Ag~ 116 (262)
T 3rkr_A 43 AAIARKLGSLGARVVLTARD--VEKLRAVEREIVAAG-GEAESHAC-DLSHSD-AIAAFATGVLAAH-GRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTT-CEEEEEEC-CTTCHH-HHHHHHHHHHHHH-SCCSEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHHhC-CceeEEEe-cCCCHH-HHHHHHHHHHHhc-CCCCEEEECCCc
Confidence 35566777789999999874 334444445554443 33322222 222332 4455666777776 579999999996
No 394
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=50.14 E-value=1.1e+02 Score=25.55 Aligned_cols=119 Identities=16% Similarity=0.134 Sum_probs=68.8
Q ss_pred EEEeccChHHHHHHHHHHHCC----CcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEec
Q 025563 81 LIETTGGNTGIGLAFIAALRG----YKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMF 156 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G----~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~ 156 (251)
|..-+.||.|.++|..-.+.| .+++++-+ +....+.+.++.+|.++. . +..+ ..++. +.+++
T Consensus 25 I~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r-~~~~~~~~~l~~~G~~~~--~---~~~e-------~~~~a-DvVil 90 (322)
T 2izz_A 25 VGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP-DMDLATVSALRKMGVKLT--P---HNKE-------TVQHS-DVLFL 90 (322)
T ss_dssp EEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS-CTTSHHHHHHHHHTCEEE--S---CHHH-------HHHHC-SEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCCcceEEEECC-CccHHHHHHHHHcCCEEe--C---ChHH-------HhccC-CEEEE
Confidence 666778999999999988999 57666533 322135555667787642 2 2222 22232 55655
Q ss_pred CCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCC
Q 025563 157 RQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTES 221 (251)
Q Consensus 157 ~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s 221 (251)
.-- +. ....+..+|...+ .++.+|+.+.+|-...-+...+.+..+..++++.-|...
T Consensus 91 av~--~~----~~~~vl~~l~~~l--~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~p 147 (322)
T 2izz_A 91 AVK--PH----IIPFILDEIGADI--EDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTP 147 (322)
T ss_dssp CSC--GG----GHHHHHHHHGGGC--CTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCGG
T ss_pred EeC--HH----HHHHHHHHHHhhc--CCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCcH
Confidence 321 11 2233444554444 356788887766655445555555445568888877543
No 395
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=50.11 E-value=70 Score=25.10 Aligned_cols=54 Identities=24% Similarity=0.296 Sum_probs=36.7
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHH-HH-cCCEEEEeCCC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVL-RA-LGAEVYLADQA 133 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~-~~-~Ga~v~~v~~~ 133 (251)
+++.+|+..+|--|.++|....+.|.+++++... ..+.+.+ +. .+.+++.++-.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~D~~ 62 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT---QADLDSLVRECPGIEPVCVDLG 62 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHSTTCEEEECCTT
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCCCEEEEeCC
Confidence 3556888888999999999999999987776532 2333322 22 26777766543
No 396
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=49.84 E-value=79 Score=25.29 Aligned_cols=85 Identities=16% Similarity=0.130 Sum_probs=49.0
Q ss_pred cEEEEecCC----CcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCC--eE-ecCCCCCCchHHHHHhhHHHH
Q 025563 103 KLIIVMPSI----ASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPN--GF-MFRQFENPANPKIHYETTGPE 175 (251)
Q Consensus 103 ~~~ivvp~~----~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~--~~-~~~~~~n~~~~~~g~~t~~~E 175 (251)
+.+++.-.. .-....+.+...|++|+.+.... ...+.+.++.++.++ .. +.....++. ....+..+
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----~v~~~~~~ 80 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE---RLEKSVHELAGTLDRNDSIILPCDVTNDA----EIETCFAS 80 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG---GGHHHHHHHHHTSSSCCCEEEECCCSSSH----HHHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch---HHHHHHHHHHHhcCCCCceEEeCCCCCHH----HHHHHHHH
Confidence 445555322 33556777888899999987642 223334444443322 22 222223332 34556667
Q ss_pred HhhhhCCCCCEEEEecCchh
Q 025563 176 IWKDSGGDVDILVAGIGTGG 195 (251)
Q Consensus 176 I~~q~~~~~d~vv~~vGtGg 195 (251)
+.++. +.+|.+|..+|...
T Consensus 81 ~~~~~-g~id~li~~Ag~~~ 99 (266)
T 3oig_A 81 IKEQV-GVIHGIAHCIAFAN 99 (266)
T ss_dssp HHHHH-SCCCEEEECCCCCC
T ss_pred HHHHh-CCeeEEEEcccccc
Confidence 77776 57999999998653
No 397
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=49.64 E-value=1.1e+02 Score=25.18 Aligned_cols=87 Identities=17% Similarity=0.147 Sum_probs=52.1
Q ss_pred CcEEEEecCC----CcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHh
Q 025563 102 YKLIIVMPSI----ASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIW 177 (251)
Q Consensus 102 ~~~~ivvp~~----~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~ 177 (251)
-+.+++.-.. .-....+.+...|++|+.+... +...+.+.++.++.+...++ +. +-...+ ....+..++.
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~-~~-Dv~d~~-~v~~~~~~~~ 104 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG---DALKKRVEPLAEELGAFVAG-HC-DVADAA-SIDAVFETLE 104 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS---HHHHHHHHHHHHHHTCEEEE-EC-CTTCHH-HHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHHHhcCCceEE-EC-CCCCHH-HHHHHHHHHH
Confidence 3566665432 3455677788899999998764 23334444554443333332 22 222332 4456666777
Q ss_pred hhhCCCCCEEEEecCchh
Q 025563 178 KDSGGDVDILVAGIGTGG 195 (251)
Q Consensus 178 ~q~~~~~d~vv~~vGtGg 195 (251)
++. +.+|.+|..+|...
T Consensus 105 ~~~-g~iD~lVnnAG~~~ 121 (293)
T 3grk_A 105 KKW-GKLDFLVHAIGFSD 121 (293)
T ss_dssp HHT-SCCSEEEECCCCCC
T ss_pred Hhc-CCCCEEEECCccCC
Confidence 776 57999999999653
No 398
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=49.61 E-value=26 Score=29.23 Aligned_cols=49 Identities=22% Similarity=0.171 Sum_probs=31.1
Q ss_pred eEEEEeccChHHH---HHHHHHHHCCCcEEEEecCC-Cc---HHHHHHHHHcCCEE
Q 025563 79 SVLIETTGGNTGI---GLAFIAALRGYKLIIVMPSI-AS---MERRIVLRALGAEV 127 (251)
Q Consensus 79 ~~vv~~ssGN~g~---alA~~a~~~G~~~~ivvp~~-~~---~~~~~~~~~~Ga~v 127 (251)
..+|.++.||.|- ++|...+..|+++.++.+.. .+ ....+.++..|.++
T Consensus 81 ~VlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~~~~~~~~~~~~~~~~~g~~~ 136 (265)
T 2o8n_A 81 TVLVICGPGNNGGDGLVCARHLKLFGYQPTIYYPKRPNKPLFTGLVTQCQKMDIPF 136 (265)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCSCCSSHHHHHHHHHHHHTTCCB
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEeCCCCCHHHHHHHHHHHHcCCcE
Confidence 4578888888774 55555566799999987643 22 22344555666554
No 399
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=49.53 E-value=60 Score=29.44 Aligned_cols=50 Identities=6% Similarity=0.018 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHc-CCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 59 RIALSMIKDAEEK-GLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 59 R~a~~~l~~a~~~-g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
|+..+.+..+++. |.--.|.+ |+..+.||-|..+|....++|.+++.+.+
T Consensus 233 ~Gv~~~~~~~l~~~G~~l~g~~-vaVqG~GnVG~~~a~~L~~~GakvVavsD 283 (470)
T 2bma_A 233 YGLVYFVLEVLKSLNIPVEKQT-AVVSGSGNVALYCVQKLLHLNVKVLTLSD 283 (470)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCE-EEEECSSHHHHHHHHHHHHTTCEECEEEE
T ss_pred HHHHHHHHHHHHhccCCcCCCE-EEEECCcHHHHHHHHHHHHCCCEEEEEEe
Confidence 5777777776654 42123444 88889999999999999999999886654
No 400
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=49.45 E-value=75 Score=26.93 Aligned_cols=107 Identities=18% Similarity=0.037 Sum_probs=64.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMF 156 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~ 156 (251)
|++ +..-+.|+-|.++|..++.+|++++++-+...... ..+.+|++. ++ +.++ +.++. +.+.+
T Consensus 146 g~~-vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~~~~~g~~~--~~---~l~e-------ll~~a-DvVil 208 (320)
T 1gdh_A 146 NKT-LGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS---DEASYQATF--HD---SLDS-------LLSVS-QFFSL 208 (320)
T ss_dssp TCE-EEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH---HHHHHTCEE--CS---SHHH-------HHHHC-SEEEE
T ss_pred CCE-EEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh---hhhhcCcEE--cC---CHHH-------HHhhC-CEEEE
Confidence 444 77778899999999999999998776655132232 334567753 21 2322 22333 45554
Q ss_pred CCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhH--HHHHHHHHHh
Q 025563 157 RQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGT--VTGSGRFLKE 206 (251)
Q Consensus 157 ~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~--~~Gi~~~~~~ 206 (251)
.--.++... ..+..+.++.+ +++.+++-+|.|+. ...+..++++
T Consensus 209 ~~p~~~~t~----~~i~~~~l~~m--k~gailIn~arg~~vd~~aL~~aL~~ 254 (320)
T 1gdh_A 209 NAPSTPETR----YFFNKATIKSL--PQGAIVVNTARGDLVDNELVVAALEA 254 (320)
T ss_dssp CCCCCTTTT----TCBSHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred eccCchHHH----hhcCHHHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 432222211 11224556666 36899999999975 4467777775
No 401
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=49.30 E-value=40 Score=28.09 Aligned_cols=52 Identities=19% Similarity=0.257 Sum_probs=32.9
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQA 133 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~ 133 (251)
++..++|..+..++..+- .+-.-.|+++...-......++..|++++.++..
T Consensus 71 i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 122 (354)
T 3ly1_A 71 ILLTAGSSEGIRAAIEAY-ASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKML 122 (354)
T ss_dssp EEEESHHHHHHHHHHHHH-CCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCC
T ss_pred EEEeCChHHHHHHHHHHH-hCCCCeEEECCCCchHHHHHHHHcCCEEEEecCC
Confidence 677777777776666554 2222234444444445567788899999999754
No 402
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=49.28 E-value=1e+02 Score=24.76 Aligned_cols=85 Identities=13% Similarity=0.129 Sum_probs=50.6
Q ss_pred cEEEEecCC--CcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhh
Q 025563 103 KLIIVMPSI--ASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDS 180 (251)
Q Consensus 103 ~~~ivvp~~--~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~ 180 (251)
+.+++.-.. .=....+.+...|++|+.++.. .+...+.+.++.+......++ +. +....+ ....+..++.++.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~-~~-Dv~~~~-~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAART--VERLEDVAKQVTDTGRRALSV-GT-DITDDA-QVAHLVDETMKAY 86 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEE-EC-CTTCHH-HHHHHHHHHHHHT
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEE-Ec-CCCCHH-HHHHHHHHHHHHc
Confidence 455555332 2345677777889999999874 334444445554443233332 22 222332 4556677777777
Q ss_pred CCCCCEEEEecCc
Q 025563 181 GGDVDILVAGIGT 193 (251)
Q Consensus 181 ~~~~d~vv~~vGt 193 (251)
+.+|.+|..+|.
T Consensus 87 -g~id~lv~nAg~ 98 (264)
T 3ucx_A 87 -GRVDVVINNAFR 98 (264)
T ss_dssp -SCCSEEEECCCS
T ss_pred -CCCcEEEECCCC
Confidence 679999999876
No 403
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=49.21 E-value=26 Score=30.36 Aligned_cols=35 Identities=34% Similarity=0.565 Sum_probs=29.3
Q ss_pred CCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecC
Q 025563 75 TPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPS 110 (251)
Q Consensus 75 ~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~ 110 (251)
.++++ |..-++|..|+.++.+++++|++++++-+.
T Consensus 12 ~~~k~-IlIlG~G~~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 12 LPGKT-IGIIGGGQLGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp CTTSE-EEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCE-EEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 35555 777888999999999999999999888654
No 404
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=49.17 E-value=66 Score=26.90 Aligned_cols=53 Identities=15% Similarity=0.008 Sum_probs=33.1
Q ss_pred EEEeccChHHHHHHHHHHHCC------------CcEEEEecCCCcHHHHHHHHHcCCEEEEeCCC
Q 025563 81 LIETTGGNTGIGLAFIAALRG------------YKLIIVMPSIASMERRIVLRALGAEVYLADQA 133 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G------------~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~ 133 (251)
++..++|..+..++..+.... -.-.|+++...-......++.+|++++.++..
T Consensus 89 i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 153 (397)
T 3f9t_A 89 GHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIK 153 (397)
T ss_dssp EEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBC
T ss_pred EEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeC
Confidence 666677776666655543211 12345555555555677788889999999754
No 405
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=49.14 E-value=97 Score=25.26 Aligned_cols=53 Identities=19% Similarity=0.257 Sum_probs=36.6
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHH-HHHHHcCCEEEEeCC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERR-IVLRALGAEVYLADQ 132 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~-~~~~~~Ga~v~~v~~ 132 (251)
|++.+|+.++|--|.++|....+.|.+++++... ..+. +..+.++.++..+..
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~ 69 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRD---TRKGEAAARTMAGQVEVREL 69 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHTTSSSEEEEEEC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhcCCeeEEEc
Confidence 4566888888999999999999999987776533 2332 233445666666543
No 406
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=48.98 E-value=68 Score=25.76 Aligned_cols=33 Identities=27% Similarity=0.307 Sum_probs=27.4
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
+++.+|+..+|.-|+++|....+.|.+++++..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEEC
Confidence 345688888899999999999999998777654
No 407
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=48.95 E-value=75 Score=24.87 Aligned_cols=54 Identities=20% Similarity=0.237 Sum_probs=36.5
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHH-H-HcCCEEEEeCCC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVL-R-ALGAEVYLADQA 133 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~-~-~~Ga~v~~v~~~ 133 (251)
+++.+|+..+|.-|.++|....+.|.+++++... ..+.+.+ + ..+.+++.++-.
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~D~~ 62 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT---NSDLVSLAKECPGIEPVCVDLG 62 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHSTTCEEEECCTT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHhccCCCcEEecCC
Confidence 3556888888999999999999999987766543 2222222 2 236777766543
No 408
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=48.94 E-value=90 Score=26.72 Aligned_cols=105 Identities=24% Similarity=0.187 Sum_probs=65.7
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMF 156 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~ 156 (251)
|++ +..-+-|+-|.++|..++.+|++++++-+.. ++. ..+.+|++. + +.+ ++.++. +.+.+
T Consensus 165 g~t-vgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~---~~~~~g~~~--~----~l~-------ell~~a-DvV~l 225 (335)
T 2g76_A 165 GKT-LGILGLGRIGREVATRMQSFGMKTIGYDPII-SPE---VSASFGVQQ--L----PLE-------EIWPLC-DFITV 225 (335)
T ss_dssp TCE-EEEECCSHHHHHHHHHHHTTTCEEEEECSSS-CHH---HHHHTTCEE--C----CHH-------HHGGGC-SEEEE
T ss_pred cCE-EEEEeECHHHHHHHHHHHHCCCEEEEECCCc-chh---hhhhcCcee--C----CHH-------HHHhcC-CEEEE
Confidence 444 7777889999999999999999977665443 232 345678753 1 222 344443 55554
Q ss_pred CCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHH--HHHHHHHh
Q 025563 157 RQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVT--GSGRFLKE 206 (251)
Q Consensus 157 ~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~--Gi~~~~~~ 206 (251)
.--.++... ..+..++++++ +++.+++-+|.|+..- .+..++++
T Consensus 226 ~~P~t~~t~----~li~~~~l~~m--k~gailIN~arg~vvd~~aL~~aL~~ 271 (335)
T 2g76_A 226 HTPLLPSTT----GLLNDNTFAQC--KKGVRVVNCARGGIVDEGALLRALQS 271 (335)
T ss_dssp CCCCCTTTT----TSBCHHHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred ecCCCHHHH----HhhCHHHHhhC--CCCcEEEECCCccccCHHHHHHHHHh
Confidence 422222211 11234666666 4689999999998654 66777775
No 409
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=48.85 E-value=18 Score=30.65 Aligned_cols=27 Identities=30% Similarity=0.391 Sum_probs=25.2
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEE
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIV 107 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~iv 107 (251)
|+.-++|-.|.++|...++.|++++++
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~V~v~ 33 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLKTLMI 33 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEE
Confidence 778889999999999999999999887
No 410
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=48.50 E-value=19 Score=30.70 Aligned_cols=27 Identities=26% Similarity=0.148 Sum_probs=25.5
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEE
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIV 107 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~iv 107 (251)
|+..++|-.|.++|.+.++.|++++||
T Consensus 4 V~IVGaGpaGl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 4 VGIIGAGIGGTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEE
Confidence 788899999999999999999999988
No 411
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=48.38 E-value=67 Score=29.10 Aligned_cols=98 Identities=16% Similarity=0.123 Sum_probs=58.6
Q ss_pred cCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcC
Q 025563 71 KGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
.+....|++ ++..+.|+-|+++|..++.+|.+++++= ..+.+..+....|.+++ ++++ +.++.
T Consensus 241 tg~~L~GKT-VgVIG~G~IGr~vA~~lrafGa~Viv~d---~dp~~a~~A~~~G~~vv------~LeE-------lL~~A 303 (464)
T 3n58_A 241 TDVMMAGKV-AVVCGYGDVGKGSAQSLAGAGARVKVTE---VDPICALQAAMDGFEVV------TLDD-------AASTA 303 (464)
T ss_dssp HCCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEC---SSHHHHHHHHHTTCEEC------CHHH-------HGGGC
T ss_pred cCCcccCCE-EEEECcCHHHHHHHHHHHHCCCEEEEEe---CCcchhhHHHhcCceec------cHHH-------HHhhC
Confidence 355556666 8888899999999999999999866542 23344444455677643 1222 23332
Q ss_pred CCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhH
Q 025563 151 PNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGT 196 (251)
Q Consensus 151 ~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~ 196 (251)
+.+.... .+. ..+..|.++++ +++++++-+|-|..
T Consensus 304 -DIVv~at-gt~-------~lI~~e~l~~M--K~GAILINvGRgdv 338 (464)
T 3n58_A 304 -DIVVTTT-GNK-------DVITIDHMRKM--KDMCIVGNIGHFDN 338 (464)
T ss_dssp -SEEEECC-SSS-------SSBCHHHHHHS--CTTEEEEECSSSTT
T ss_pred -CEEEECC-CCc-------cccCHHHHhcC--CCCeEEEEcCCCCc
Confidence 3443321 121 12334566666 35788888887763
No 412
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=48.23 E-value=1.2e+02 Score=25.26 Aligned_cols=149 Identities=13% Similarity=0.069 Sum_probs=76.3
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEec--------CC---------Cc-----HHHHHH
Q 025563 62 LSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMP--------SI---------AS-----MERRIV 119 (251)
Q Consensus 62 ~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp--------~~---------~~-----~~~~~~ 119 (251)
...+.++.++... . .|+...+.....+++-.+...+++++.... .. .+ ....+.
T Consensus 78 ~~~~~~l~~~~~v---~-~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (386)
T 3sg0_A 78 AQNARKLLSEEKV---D-VLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAAILVAPMDERRKWVYKVVPNDDIMAEAIGKY 153 (386)
T ss_dssp HHHHHHHHHTSCC---S-EEECCSSHHHHHHHHHHHHHTTCCEEECCCCGGGTCSCCTTGGGEEECSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCc---e-EEECCCCchhHHHHHHHHHhcCCeEEEecCCCccccccCCCCCcEEecCCCcHHHHHHHHHH
Confidence 3444555555221 1 255555556667777888999999887542 00 01 122444
Q ss_pred HHHcCC-EEEEeCCCCCh-HHHHHHHHHHhhcCCCeEecC-CCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhH
Q 025563 120 LRALGA-EVYLADQAGGF-EGILRKGEEILSNTPNGFMFR-QFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGT 196 (251)
Q Consensus 120 ~~~~Ga-~v~~v~~~~~~-~~~~~~a~~~~~~~~~~~~~~-~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~ 196 (251)
+..+|. +|..+.....+ .+..+..++..++. |.-.+. ....... ..+.....++.+ ..||.||++ +.+..
T Consensus 154 l~~~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~--~d~~~~~~~~~~---~~~dav~~~-~~~~~ 226 (386)
T 3sg0_A 154 IAKTGAKKVGYIGFSDAYGEGYYKVLAAAAPKL-GFELTTHEVYARSD--ASVTGQVLKIIA---TKPDAVFIA-SAGTP 226 (386)
T ss_dssp HHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHH-TCEECCCEEECTTC--SCCHHHHHHHHH---TCCSEEEEE-CCSGG
T ss_pred HHhcCCCEEEEEecCchHHHHHHHHHHHHHHHc-CCEEEEEEeeCCCC--CcHHHHHHHHHh---cCCCEEEEe-cCcch
Confidence 556674 45555332222 22333344444444 222211 0000000 011222223332 468988775 45566
Q ss_pred HHHHHHHHHhhCCCcEEEEEeCCCC
Q 025563 197 VTGSGRFLKEKNPNIKVYGVEPTES 221 (251)
Q Consensus 197 ~~Gi~~~~~~~~~~~~vigVep~~s 221 (251)
+.++.+.+++.+-+++++++.....
T Consensus 227 a~~~~~~~~~~g~~~~~~~~~~~~~ 251 (386)
T 3sg0_A 227 AVLPQKALRERGFKGAIYQTHGVAT 251 (386)
T ss_dssp GHHHHHHHHHTTCCSEEECCGGGCS
T ss_pred HHHHHHHHHHcCCCCcEEeccccCC
Confidence 7799999999887788887655444
No 413
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=48.15 E-value=35 Score=28.86 Aligned_cols=51 Identities=14% Similarity=0.032 Sum_probs=29.8
Q ss_pred EEEeccChHHHHHHHHHH-HCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCC
Q 025563 81 LIETTGGNTGIGLAFIAA-LRGYKLIIVMPSIASMERRIVLRALGAEVYLADQA 133 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~-~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~ 133 (251)
++..+++..+..++..+- .-|= .|+++...-......++..|++++.++..
T Consensus 95 v~~~~G~~~al~~~~~~l~~~gd--~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~ 146 (369)
T 3cq5_A 95 LWAANGSNEILQQLLQAFGGPGR--TALGFQPSYSMHPILAKGTHTEFIAVSRG 146 (369)
T ss_dssp EEEESHHHHHHHHHHHHHCSTTC--EEEEEESSCTHHHHHHHHTTCEEEEEECC
T ss_pred EEECCChHHHHHHHHHHhcCCCC--EEEEcCCChHHHHHHHHHcCCEEEEecCC
Confidence 666666666665555443 2232 33333333334455678899999998753
No 414
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=48.09 E-value=62 Score=23.60 Aligned_cols=30 Identities=13% Similarity=0.120 Sum_probs=25.0
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPS 110 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~ 110 (251)
++..+.|..|..++......|.+++++-+.
T Consensus 6 vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 6 FIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 555678999999999999999998887653
No 415
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=47.89 E-value=55 Score=29.04 Aligned_cols=74 Identities=20% Similarity=0.019 Sum_probs=46.3
Q ss_pred CCeEEEEeccChHHHHHHHHHH-HCCCcEEEEecCCCc-------------HHHHHHHHHcCCEEEEeCCCC-ChHHHHH
Q 025563 77 GKSVLIETTGGNTGIGLAFIAA-LRGYKLIIVMPSIAS-------------MERRIVLRALGAEVYLADQAG-GFEGILR 141 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~-~~G~~~~ivvp~~~~-------------~~~~~~~~~~Ga~v~~v~~~~-~~~~~~~ 141 (251)
+++.+|+..|...|+|.|.+.+ +.|-.++++.-+... ....+.++..|.+.+.+.... +-+...+
T Consensus 50 pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~ 129 (401)
T 4ggo_A 50 PKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQ 129 (401)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHH
Confidence 3566888888888888887765 678887777633211 223567788888877765432 2233444
Q ss_pred HHHHHhhcC
Q 025563 142 KGEEILSNT 150 (251)
Q Consensus 142 ~a~~~~~~~ 150 (251)
...++.++.
T Consensus 130 vi~~i~~~~ 138 (401)
T 4ggo_A 130 VIEEAKKKG 138 (401)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhc
Confidence 445555554
No 416
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=47.85 E-value=1.1e+02 Score=25.51 Aligned_cols=131 Identities=13% Similarity=0.151 Sum_probs=70.3
Q ss_pred EEEeccChHHHHHHH--HHHHCCCcEEEEecCCC-------------c-----HHHHHHHHHcCC-EEEEeCCCCChH-H
Q 025563 81 LIETTGGNTGIGLAF--IAALRGYKLIIVMPSIA-------------S-----MERRIVLRALGA-EVYLADQAGGFE-G 138 (251)
Q Consensus 81 vv~~ssGN~g~alA~--~a~~~G~~~~ivvp~~~-------------~-----~~~~~~~~~~Ga-~v~~v~~~~~~~-~ 138 (251)
|+...+.....+++- .+...+++++....... + ....+.+..+|. +|..+.....+. +
T Consensus 77 iig~~~s~~~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~~~iaii~~~~~~g~~ 156 (364)
T 3lop_A 77 LLTVVGTANVEALMREGVLAEARLPLVGPATGASSMTTDPLVFPIKASYQQEIDKMITALVTIGVTRIGVLYQEDALGKE 156 (364)
T ss_dssp EECCCCHHHHHHHHHTTHHHHHTCCEESCSCCCGGGGSCTTEECCSCCHHHHHHHHHHHHHHTTCCCEEEEEETTHHHHH
T ss_pred EEecCCCHHHHhhCchhhHHhcCCcEEEcccCcHhhccCCcEEEeCCChHHHHHHHHHHHHHcCCceEEEEEeCchhhHH
Confidence 554445556677777 88889999776432110 1 122445556775 454443322222 2
Q ss_pred HHHHHHHHhhcCCCeE----ecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEE
Q 025563 139 ILRKGEEILSNTPNGF----MFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVY 214 (251)
Q Consensus 139 ~~~~a~~~~~~~~~~~----~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vi 214 (251)
..+..++..++.+..+ .+.. +.. .+.....+|.+ ..||.||++ +.+..+.++.+.+++.+-+++++
T Consensus 157 ~~~~~~~~~~~~G~~v~~~~~~~~-~~~-----d~~~~~~~l~~---~~~d~v~~~-~~~~~a~~~~~~~~~~g~~~~~i 226 (364)
T 3lop_A 157 AITGVERTLKAHALAITAMASYPR-NTA-----NVGPAVDKLLA---ADVQAIFLG-ATAEPAAQFVRQYRARGGEAQLL 226 (364)
T ss_dssp HHHHHHHHHHTTTCCCSEEEEECT-TSC-----CCHHHHHHHHH---SCCSEEEEE-SCHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHHcCCcEEEEEEecC-CCc-----cHHHHHHHHHh---CCCCEEEEe-cCcHHHHHHHHHHHHcCCCCeEE
Confidence 3334445555542111 1111 111 11222223332 468988875 46677889999999988888888
Q ss_pred EEeCCCC
Q 025563 215 GVEPTES 221 (251)
Q Consensus 215 gVep~~s 221 (251)
+......
T Consensus 227 ~~~~~~~ 233 (364)
T 3lop_A 227 GLSSIDP 233 (364)
T ss_dssp ECTTSCH
T ss_pred EeccCCh
Confidence 7754443
No 417
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=47.69 E-value=71 Score=28.66 Aligned_cols=97 Identities=12% Similarity=0.115 Sum_probs=58.0
Q ss_pred CCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCC
Q 025563 72 GLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTP 151 (251)
Q Consensus 72 g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~ 151 (251)
+....|++ ++..+.|+-|+++|..++.+|.+++++ . .++.+..+....|.++. ++++ ..++.
T Consensus 215 ~~~L~Gkt-V~ViG~G~IGk~vA~~Lra~Ga~Viv~-D--~dp~ra~~A~~~G~~v~------~Lee-------al~~A- 276 (435)
T 3gvp_A 215 DMMFGGKQ-VVVCGYGEVGKGCCAALKAMGSIVYVT-E--IDPICALQACMDGFRLV------KLNE-------VIRQV- 276 (435)
T ss_dssp CCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEE-C--SCHHHHHHHHHTTCEEC------CHHH-------HTTTC-
T ss_pred CceecCCE-EEEEeeCHHHHHHHHHHHHCCCEEEEE-e--CChhhhHHHHHcCCEec------cHHH-------HHhcC-
Confidence 44456666 888899999999999999999985543 2 23444445556676542 2222 22332
Q ss_pred CeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhH
Q 025563 152 NGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGT 196 (251)
Q Consensus 152 ~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~ 196 (251)
+.+... -.+. ..+..|.+++++ ++.+|+-+|-|..
T Consensus 277 DIVi~a-tgt~-------~lI~~e~l~~MK--~gailINvgrg~~ 311 (435)
T 3gvp_A 277 DIVITC-TGNK-------NVVTREHLDRMK--NSCIVCNMGHSNT 311 (435)
T ss_dssp SEEEEC-SSCS-------CSBCHHHHHHSC--TTEEEEECSSTTT
T ss_pred CEEEEC-CCCc-------ccCCHHHHHhcC--CCcEEEEecCCCc
Confidence 334332 1111 123345566663 5788888887754
No 418
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=47.47 E-value=91 Score=27.98 Aligned_cols=51 Identities=24% Similarity=0.176 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecC
Q 025563 59 RIALSMIKDAEE-KGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPS 110 (251)
Q Consensus 59 R~a~~~l~~a~~-~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~ 110 (251)
|++.+.+..+.+ .|.--.|.+ |+..+.||-|..+|....++|.+++.+.+.
T Consensus 216 ~Gv~~~~~~~~~~~g~~l~g~~-vaVqGfGnVG~~~a~~L~e~GakvVavsD~ 267 (440)
T 3aog_A 216 RGVFITAAAAAEKIGLQVEGAR-VAIQGFGNVGNAAARAFHDHGARVVAVQDH 267 (440)
T ss_dssp HHHHHHHHHHHHHHTCCSTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCccCCE-EEEeccCHHHHHHHHHHHHCCCEEEEEEcC
Confidence 577777777554 454223555 888889999999999999999998866643
No 419
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=47.41 E-value=63 Score=25.83 Aligned_cols=71 Identities=20% Similarity=0.138 Sum_probs=41.1
Q ss_pred CeEEEEeccChHHHHHHHHHHH---CCCcEEEEecCCCc-HHHHHHHHHc--CCEEEEeCCC-CChHHHHHHHHHHhh
Q 025563 78 KSVLIETTGGNTGIGLAFIAAL---RGYKLIIVMPSIAS-MERRIVLRAL--GAEVYLADQA-GGFEGILRKGEEILS 148 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~---~G~~~~ivvp~~~~-~~~~~~~~~~--Ga~v~~v~~~-~~~~~~~~~a~~~~~ 148 (251)
++.+|+..+|--|+++|..-.+ .|.+++++...... ....+.++.. |.++..+..+ .+.++..+...+..+
T Consensus 7 k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 4557788888899999988877 79987776533211 1122334332 6666555322 244444445555544
No 420
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=47.41 E-value=41 Score=30.37 Aligned_cols=69 Identities=17% Similarity=0.134 Sum_probs=39.1
Q ss_pred CCeEecCCCCCCchHHHHHhhHHHHHhhhhC----------CCCCEEEEecC-chhHHHHHHHHH----HhhCCCcE--E
Q 025563 151 PNGFMFRQFENPANPKIHYETTGPEIWKDSG----------GDVDILVAGIG-TGGTVTGSGRFL----KEKNPNIK--V 213 (251)
Q Consensus 151 ~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~----------~~~d~vv~~vG-tGg~~~Gi~~~~----~~~~~~~~--v 213 (251)
|..++..+.+...|+..||.+.|.|+.+++. ..++.+++..+ +|||-+|++..+ ++..|+.- .
T Consensus 89 p~~~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~ 168 (451)
T 3ryc_A 89 PEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 168 (451)
T ss_dssp GGGEEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHeeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHhcCcceEEE
Confidence 3445566656666776798888888876531 12444444433 445556666654 44466533 3
Q ss_pred EEEeCC
Q 025563 214 YGVEPT 219 (251)
Q Consensus 214 igVep~ 219 (251)
++|-|.
T Consensus 169 ~~v~P~ 174 (451)
T 3ryc_A 169 FSIYPA 174 (451)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 456554
No 421
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=47.22 E-value=1e+02 Score=25.26 Aligned_cols=87 Identities=15% Similarity=0.181 Sum_probs=49.3
Q ss_pred cEEEEecCC--CcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhh
Q 025563 103 KLIIVMPSI--ASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDS 180 (251)
Q Consensus 103 ~~~ivvp~~--~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~ 180 (251)
+.+++.-.. .=....+.+...|++|+.+.... ....+...+..++.+.....-+. +....+ ....+..++.++.
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~-Dv~d~~-~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE--EGDANETKQYVEKEGVKCVLLPG-DLSDEQ-HCKDIVQETVRQL 123 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHTTTCCEEEEES-CTTSHH-HHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHHHHhcCCcEEEEEC-CCCCHH-HHHHHHHHHHHHc
Confidence 455555332 22455677778899999987642 23333344443433222322222 222332 4556677777777
Q ss_pred CCCCCEEEEecCch
Q 025563 181 GGDVDILVAGIGTG 194 (251)
Q Consensus 181 ~~~~d~vv~~vGtG 194 (251)
+.+|.+|..+|..
T Consensus 124 -g~iD~lvnnAg~~ 136 (291)
T 3ijr_A 124 -GSLNILVNNVAQQ 136 (291)
T ss_dssp -SSCCEEEECCCCC
T ss_pred -CCCCEEEECCCCc
Confidence 5799999998853
No 422
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=47.03 E-value=50 Score=25.92 Aligned_cols=76 Identities=17% Similarity=0.303 Sum_probs=43.4
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCc
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGT 193 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGt 193 (251)
....+.+...|++|+.+... .+...+.+.++.++.+......+. +....+ ....+..++.++. +.+|.+|..+|.
T Consensus 16 ~~ia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~-~v~~~~~~~~~~~-g~id~li~~Ag~ 90 (235)
T 3l77_A 16 EAIARALARDGYALALGARS--VDRLEKIAHELMQEQGVEVFYHHL-DVSKAE-SVEEFSKKVLERF-GDVDVVVANAGL 90 (235)
T ss_dssp HHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHCCCEEEEEC-CTTCHH-HHHHHCC-HHHHH-SSCSEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhhcCCeEEEEEe-ccCCHH-HHHHHHHHHHHhc-CCCCEEEECCcc
Confidence 45567777889999998874 333444444444222222322222 222332 4455555666666 579999999986
Q ss_pred h
Q 025563 194 G 194 (251)
Q Consensus 194 G 194 (251)
+
T Consensus 91 ~ 91 (235)
T 3l77_A 91 G 91 (235)
T ss_dssp C
T ss_pred c
Confidence 4
No 423
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=46.81 E-value=1.1e+02 Score=24.56 Aligned_cols=54 Identities=13% Similarity=0.083 Sum_probs=36.9
Q ss_pred HHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCC---CcEEEEEeCCC
Q 025563 165 PKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNP---NIKVYGVEPTE 220 (251)
Q Consensus 165 ~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~---~~~vigVep~~ 220 (251)
.+.++. ...+++++- +++|++++-+.+-..+.|+..++++.+- ++.|+|.+-..
T Consensus 179 ~~~~~~-~~~~~l~~~-~~~~a~~i~~~nD~~A~g~~~al~~~g~~v~di~vvG~D~~~ 235 (306)
T 8abp_A 179 IPGAFD-AANSMLVQH-PEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVD 235 (306)
T ss_dssp HHHHHH-HHHHHHTTC-TTCSEEEEECSSHHHHHHHHHHHHHTTCCGGGEEEEEESSGG
T ss_pred hHHHHH-HHHHHHHhC-CCCceEEEEeCCcHHHHHHHHHHHHcCCCCCceEEEEeCcHH
Confidence 333443 344555543 5688855556666778899999999874 78899987654
No 424
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=46.81 E-value=54 Score=26.25 Aligned_cols=64 Identities=9% Similarity=0.067 Sum_probs=39.2
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHH
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQA-GGFEGILRKGEEI 146 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~ 146 (251)
++.+|+..+|--|+++|..-.+.|.+++++.... .. ..+..+.++..+..+ .+.++..+..++.
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--~~---~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 74 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG--ED---VVADLGDRARFAAADVTDEAAVASALDLA 74 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC--HH---HHHHTCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch--HH---HHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 4558888889999999999999999887765422 22 233346655554321 2444444333333
No 425
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=46.57 E-value=1.4e+02 Score=33.08 Aligned_cols=73 Identities=22% Similarity=0.268 Sum_probs=48.8
Q ss_pred CCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC--c---HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHH
Q 025563 74 ITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA--S---MERRIVLRALGAEVYLADQA-GGFEGILRKGEEI 146 (251)
Q Consensus 74 ~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~--~---~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~ 146 (251)
+.++++.+|+..+|-.|+++|..-.+.|.+.++++..+. . ...++.++..|++++.+... .+.++..+...+.
T Consensus 1881 ~~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~ 1959 (2512)
T 2vz8_A 1881 CPPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEA 1959 (2512)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHH
Confidence 345677788888899999999999999999777665432 2 23455667789988776432 2444444444444
No 426
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=46.44 E-value=1.1e+02 Score=24.90 Aligned_cols=84 Identities=13% Similarity=0.099 Sum_probs=50.9
Q ss_pred cEEEEecCC----CcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhh
Q 025563 103 KLIIVMPSI----ASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWK 178 (251)
Q Consensus 103 ~~~ivvp~~----~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~ 178 (251)
+.+++.-.. .-....+.+...|++|+.++... ..+.++++.++.+...++ +. +....+ ....+..++.+
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~l~~~~~~~~~~-~~-Dl~~~~-~v~~~~~~~~~ 99 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ----FKDRVEKLCAEFNPAAVL-PC-DVISDQ-EIKDLFVELGK 99 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT----CHHHHHHHHGGGCCSEEE-EC-CTTCHH-HHHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch----HHHHHHHHHHhcCCceEE-Ee-ecCCHH-HHHHHHHHHHH
Confidence 555555422 33556777888999999998752 223445555544333332 22 222332 45566677777
Q ss_pred hhCCCCCEEEEecCch
Q 025563 179 DSGGDVDILVAGIGTG 194 (251)
Q Consensus 179 q~~~~~d~vv~~vGtG 194 (251)
+. +.+|.+|..+|..
T Consensus 100 ~~-g~id~li~nAg~~ 114 (280)
T 3nrc_A 100 VW-DGLDAIVHSIAFA 114 (280)
T ss_dssp HC-SSCCEEEECCCCC
T ss_pred Hc-CCCCEEEECCccC
Confidence 66 6799999999965
No 427
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=46.36 E-value=89 Score=25.53 Aligned_cols=76 Identities=17% Similarity=0.124 Sum_probs=44.8
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCc
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGT 193 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGt 193 (251)
....+.+...|++|+.++.. .+...+.+.++.+.....+..-+. +....+ ....+..++.++. +.+|.+|..+|.
T Consensus 47 ~aia~~la~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~-Dv~d~~-~v~~~~~~~~~~~-g~iD~lvnnAG~ 121 (281)
T 4dry_A 47 RGIAQALSAEGYSVVITGRR--PDVLDAAAGEIGGRTGNIVRAVVC-DVGDPD-QVAALFAAVRAEF-ARLDLLVNNAGS 121 (281)
T ss_dssp HHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHSSCEEEEEC-CTTCHH-HHHHHHHHHHHHH-SCCSEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCCeEEEEEc-CCCCHH-HHHHHHHHHHHHc-CCCCEEEECCCC
Confidence 45566777789999999874 333334444443332222111122 222332 4456667777777 679999999986
Q ss_pred h
Q 025563 194 G 194 (251)
Q Consensus 194 G 194 (251)
.
T Consensus 122 ~ 122 (281)
T 4dry_A 122 N 122 (281)
T ss_dssp C
T ss_pred C
Confidence 4
No 428
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=46.14 E-value=1e+02 Score=23.88 Aligned_cols=55 Identities=20% Similarity=0.236 Sum_probs=37.3
Q ss_pred eEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHH
Q 025563 79 SVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKG 143 (251)
Q Consensus 79 ~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a 143 (251)
..||.+.+||. .+++.+-+++|.+++++- .+.. ++. ++-+.+++.+.+.++.+..
T Consensus 5 I~iiD~g~~n~-~si~~al~~~G~~~~v~~----~~~~---l~~--~D~lilPG~g~~~~~~~~~ 59 (211)
T 4gud_A 5 VVIIDTGCANI-SSVKFAIERLGYAVTISR----DPQV---VLA--ADKLFLPGVGTASEAMKNL 59 (211)
T ss_dssp EEEECCCCTTH-HHHHHHHHHTTCCEEEEC----CHHH---HHH--CSEEEECCCSCHHHHHHHH
T ss_pred EEEEECCCChH-HHHHHHHHHCCCEEEEEC----CHHH---HhC--CCEEEECCCCCHHHHHHHH
Confidence 45888999997 678999999999998752 2222 333 3455567766676665543
No 429
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=45.88 E-value=44 Score=29.67 Aligned_cols=44 Identities=14% Similarity=0.078 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHH----HHHcCCEEEEeC
Q 025563 88 NTGIGLAFIAALRGYKLIIVMPSIA--SMERRIV----LRALGAEVYLAD 131 (251)
Q Consensus 88 N~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~----~~~~Ga~v~~v~ 131 (251)
|.++++..++.++|++++++.|+.- .+.-++. .+..|+++..+.
T Consensus 209 nVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~ 258 (399)
T 3q98_A 209 SVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVT 258 (399)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 7899999999999999999999853 4444433 345677776654
No 430
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=45.86 E-value=71 Score=28.45 Aligned_cols=54 Identities=19% Similarity=0.180 Sum_probs=38.5
Q ss_pred CCCeEEEEeccChHHHHHHHHHHHCCCc-EEEEecCCC-----cHHHHHHHHHcCCEEEEe
Q 025563 76 PGKSVLIETTGGNTGIGLAFIAALRGYK-LIIVMPSIA-----SMERRIVLRALGAEVYLA 130 (251)
Q Consensus 76 ~g~~~vv~~ssGN~g~alA~~a~~~G~~-~~ivvp~~~-----~~~~~~~~~~~Ga~v~~v 130 (251)
.++. |+.-++||.|.-+|..+.+.|.+ ++++..... ....++.++..|.+++.-
T Consensus 263 ~gk~-VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e~~~~~~~Gv~~~~~ 322 (456)
T 2vdc_G 263 AGKH-VVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIWQ 322 (456)
T ss_dssp CCSE-EEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHHHHHHHHTTCEEECC
T ss_pred CCCE-EEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHHHHHHHHCCCEEEeC
Confidence 3455 78889999999999999999985 777764431 233455666777776554
No 431
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=45.82 E-value=72 Score=28.39 Aligned_cols=51 Identities=33% Similarity=0.303 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHH-cCCC-CCCCeEEEEeccChHHHHHHHHHHH-CCCcEEEEecC
Q 025563 59 RIALSMIKDAEE-KGLI-TPGKSVLIETTGGNTGIGLAFIAAL-RGYKLIIVMPS 110 (251)
Q Consensus 59 R~a~~~l~~a~~-~g~~-~~g~~~vv~~ssGN~g~alA~~a~~-~G~~~~ivvp~ 110 (251)
|++.+.++.+.+ .|.- -.|++ +...+.||-|..+|..++. +|++++.+.+.
T Consensus 192 ~Gv~~~~~~~~~~~G~~~l~gkt-vgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~ 245 (419)
T 1gtm_A 192 RGASYTIREAAKVLGWDTLKGKT-IAIQGYGNAGYYLAKIMSEDFGMKVVAVSDS 245 (419)
T ss_dssp HHHHHHHHHHHHHTTCSCSTTCE-EEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred hHHHHHHHHHHHHhCCcccCCCE-EEEEcCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 577777776654 4543 34555 8888889999999999999 99998877643
No 432
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=45.78 E-value=37 Score=30.62 Aligned_cols=69 Identities=26% Similarity=0.376 Sum_probs=39.0
Q ss_pred CCeEecCCCCCCchHHHHHhhHHHHHhhhhC----------CCCCEEEEecC-chhHHHHHHHHH----HhhCCC--cEE
Q 025563 151 PNGFMFRQFENPANPKIHYETTGPEIWKDSG----------GDVDILVAGIG-TGGTVTGSGRFL----KEKNPN--IKV 213 (251)
Q Consensus 151 ~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~----------~~~d~vv~~vG-tGg~~~Gi~~~~----~~~~~~--~~v 213 (251)
|..++..+.+...|+..||.+.|.|+.++.. ..++.+++..+ +|||-+|++..+ ++..|+ +-.
T Consensus 87 p~~~i~g~~gAgNN~A~G~yt~G~e~~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~ 166 (445)
T 3ryc_B 87 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNT 166 (445)
T ss_dssp GGGEEECSSCCTTCHHHHHHSHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred ccceEEccccccCCccccchhhhHHHHHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHHcCccccce
Confidence 3445556666666776799899988876531 12333444332 444556666654 444665 333
Q ss_pred EEEeCC
Q 025563 214 YGVEPT 219 (251)
Q Consensus 214 igVep~ 219 (251)
++|-|.
T Consensus 167 ~sV~Ps 172 (445)
T 3ryc_B 167 FSVMPS 172 (445)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 556664
No 433
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=45.60 E-value=59 Score=26.72 Aligned_cols=53 Identities=13% Similarity=0.068 Sum_probs=34.7
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcH--HHHHHHH-HcCCEEEEe
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASM--ERRIVLR-ALGAEVYLA 130 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~--~~~~~~~-~~Ga~v~~v 130 (251)
++.+|+..+|--|+++|..-.+.|.+++++...+... ...+.++ ..|.++..+
T Consensus 10 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 65 (291)
T 1e7w_A 10 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 65 (291)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEE
Confidence 4557888888999999999999999877765233211 1223344 557666554
No 434
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=45.60 E-value=43 Score=29.95 Aligned_cols=44 Identities=14% Similarity=0.157 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHCCCcEEEEecCCC--cHHHHHH----HHHcCCEEEEeC
Q 025563 88 NTGIGLAFIAALRGYKLIIVMPSIA--SMERRIV----LRALGAEVYLAD 131 (251)
Q Consensus 88 N~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~----~~~~Ga~v~~v~ 131 (251)
|.+++++.++.++|++++++.|+.- .+..++. ++..|+++..+.
T Consensus 206 nVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~ 255 (418)
T 2yfk_A 206 SVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTN 255 (418)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEES
T ss_pred hHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 5999999999999999999999864 4444433 344676665553
No 435
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=45.50 E-value=1.2e+02 Score=24.33 Aligned_cols=121 Identities=15% Similarity=0.085 Sum_probs=64.9
Q ss_pred HHHHHCCCcEEEEecC---C--Cc-----HH-----HHHH-HHHcC--CEEEEeCCCCCh---HHHHHHHHHHhhcCCCe
Q 025563 95 FIAALRGYKLIIVMPS---I--AS-----ME-----RRIV-LRALG--AEVYLADQAGGF---EGILRKGEEILSNTPNG 153 (251)
Q Consensus 95 ~~a~~~G~~~~ivvp~---~--~~-----~~-----~~~~-~~~~G--a~v~~v~~~~~~---~~~~~~a~~~~~~~~~~ 153 (251)
..++..|+|++.+-.. . .. .. -.+. ++.+| .+|..+.+..+. .++.+-.++..+++|+.
T Consensus 76 ~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~gg~~~I~~i~g~~~~~~~~~R~~Gf~~al~~~~~~ 155 (283)
T 2ioy_A 76 KEANSKNIPVITIDRSANGGDVVCHIASDNVKGGEMAAEFIAKALKGKGNVVELEGIPGASAARDRGKGFDEAIAKYPDI 155 (283)
T ss_dssp HHHHHTTCCEEEESSCCSSSCCSEEEEECHHHHHHHHHHHHHHHTTTCEEEEEEECCTTCHHHHHHHHHHHHHHTTCTTE
T ss_pred HHHHHCCCeEEEecCCCCCcceeEEEecChHHHHHHHHHHHHHHcCCCceEEEEECCCCCccHHHHHHHHHHHHHhCCCC
Confidence 3456789998776421 1 10 11 1223 33435 467666543222 23344345555555443
Q ss_pred EecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHHHHHHhhCC-CcEEEEEeCC
Q 025563 154 FMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSGRFLKEKNP-NIKVYGVEPT 219 (251)
Q Consensus 154 ~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~-~~~vigVep~ 219 (251)
-+..........+.++. ...+++++- ++||+|||. +-..+.|+..++++.+- ++.|+|.+-.
T Consensus 156 ~~~~~~~~~~~~~~~~~-~~~~ll~~~-~~~~ai~~~--nD~~A~g~~~al~~~G~~di~viG~D~~ 218 (283)
T 2ioy_A 156 KIVAKQAADFDRSKGLS-VMENILQAQ-PKIDAVFAQ--NDEMALGAIKAIEAANRQGIIVVGFDGT 218 (283)
T ss_dssp EEEEEEECTTCHHHHHH-HHHHHHHHC-SCCCEEEES--SHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred EEEeeccCCCCHHHHHH-HHHHHHHhC-CCccEEEEC--CchHHHHHHHHHHHCCCCCcEEEEeCCC
Confidence 22211111123333444 344555543 568998875 34567799999998764 7999999854
No 436
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=45.38 E-value=1.2e+02 Score=24.39 Aligned_cols=147 Identities=14% Similarity=0.069 Sum_probs=74.5
Q ss_pred HHHHHHHHcCCCCCCCeEEEEeccC-hHHHHHHHHHHHCCCcEEEEecC-C---------CcH-----HHHHHHHH-cCC
Q 025563 63 SMIKDAEEKGLITPGKSVLIETTGG-NTGIGLAFIAALRGYKLIIVMPS-I---------ASM-----ERRIVLRA-LGA 125 (251)
Q Consensus 63 ~~l~~a~~~g~~~~g~~~vv~~ssG-N~g~alA~~a~~~G~~~~ivvp~-~---------~~~-----~~~~~~~~-~Ga 125 (251)
..+..+..++. .- +|..+.. +........+...|+|++.+-.. . ... .-.+.+.. +|-
T Consensus 52 ~~~~~l~~~~v----dg-iii~~~~~~~~~~~~~~~~~~~ipvV~~~~~~~~~~~~~~v~~d~~~~g~~a~~~l~~~~g~ 126 (303)
T 3d02_A 52 KIIEDLIARKV----DA-ITIVPNDANVLEPVFKKARDAGIVVLTNESPGQPSANWDVEIIDNEKFAAEYVEHMAKRMGG 126 (303)
T ss_dssp HHHHHHHHTTC----SE-EEECCSCHHHHHHHHHHHHHTTCEEEEESCTTCTTCSEEEESSCHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHcCC----CE-EEEecCChHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEecCHHHHHHHHHHHHHHHhCc
Confidence 34455555553 22 4444332 22223334456789998876432 1 011 11233444 675
Q ss_pred --EEEEeCCCCCh---HHHHHHHHHHhh-cCCCeEecC-CCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHH
Q 025563 126 --EVYLADQAGGF---EGILRKGEEILS-NTPNGFMFR-QFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVT 198 (251)
Q Consensus 126 --~v~~v~~~~~~---~~~~~~a~~~~~-~~~~~~~~~-~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~ 198 (251)
++..+.+..+. .++.+-.++..+ ..++.-.+. .+........++. ...+++++- +++|+||+.- ...+.
T Consensus 127 ~~~i~~i~g~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~~ai~~~~--d~~a~ 202 (303)
T 3d02_A 127 KGGYVIYVGSLTVPQHNLWADLLVKYQKEHYPDMHEVTRRMPVAESVDDSRR-TTLDLMKTY-PDLKAVVSFG--SNGPI 202 (303)
T ss_dssp CEEEEEECSCSSCHHHHHHHHHHHHHHHHHCTTEEESSSCBSCTTCHHHHHH-HHHHHHHHC-TTEEEEEESS--TTHHH
T ss_pred CceEEEEecCCCCccHHHHHHHHHHHHHhhCCCCEEEEeecCCCCCHHHHHH-HHHHHHHhC-CCCCEEEEeC--Ccchh
Confidence 77766543222 223333344333 333433332 1122233333433 344555443 4688888764 45667
Q ss_pred HHHHHHHhhCC--CcEEEEEeC
Q 025563 199 GSGRFLKEKNP--NIKVYGVEP 218 (251)
Q Consensus 199 Gi~~~~~~~~~--~~~vigVep 218 (251)
|+..++++.+- ++.|+|.+-
T Consensus 203 g~~~al~~~g~~~dv~vig~d~ 224 (303)
T 3d02_A 203 GAGRAVKEKRAKNKVAVYGMMI 224 (303)
T ss_dssp HHHHHHHHTTCTTTCEEEECCC
T ss_pred HHHHHHHhcCCCCCeEEEEeCC
Confidence 99999998764 699999975
No 437
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=45.32 E-value=1.3e+02 Score=24.93 Aligned_cols=150 Identities=11% Similarity=0.038 Sum_probs=79.8
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC--------------CcH-----HHHHHH-
Q 025563 61 ALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI--------------ASM-----ERRIVL- 120 (251)
Q Consensus 61 a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~--------------~~~-----~~~~~~- 120 (251)
+...+.++.+++.. . .||...+.....+++-.+...+++++...... .+. ...+.+
T Consensus 69 ~~~~~~~l~~~~~v---~-~iiG~~~s~~~~~~~~~~~~~~iP~i~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~ 144 (366)
T 3td9_A 69 AANAAARAIDKEKV---L-AIIGEVASAHSLAIAPIAEENKVPMVTPASTNPLVTQGRKFVSRVCFIDPFQGAAMAVFAY 144 (366)
T ss_dssp HHHHHHHHHHTSCC---S-EEEECSSHHHHHHHHHHHHHTTCCEEESSCCCGGGTTTCSSEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCe---E-EEEccCCchhHHHHHHHHHhCCCeEEecCCCCccccCCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 34445555555422 1 26656666677788888999999988654210 011 123344
Q ss_pred HHcCC-EEEEe-CCCCChHH-HHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHH
Q 025563 121 RALGA-EVYLA-DQAGGFEG-ILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTV 197 (251)
Q Consensus 121 ~~~Ga-~v~~v-~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~ 197 (251)
+.+|. +|..+ ....++.. ..+..++..++.+..+-...+.. .. ..+.....+|.+ .++|.||++ +.+..+
T Consensus 145 ~~~g~~~iaii~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~-~~--~d~~~~~~~l~~---~~~d~v~~~-~~~~~a 217 (366)
T 3td9_A 145 KNLGAKRVVVFTDVEQDYSVGLSNFFINKFTELGGQVKRVFFRS-GD--QDFSAQLSVAMS---FNPDAIYIT-GYYPEI 217 (366)
T ss_dssp HTSCCCEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEECT-TC--CCCHHHHHHHHH---TCCSEEEEC-SCHHHH
T ss_pred HhcCCcEEEEEEeCCCcHHHHHHHHHHHHHHHCCCEEEEEEeCC-CC--ccHHHHHHHHHh---cCCCEEEEc-cchhHH
Confidence 44574 55555 32223322 22334444555422221111111 00 012222333332 468988875 667778
Q ss_pred HHHHHHHHhhCCCcEEEEEeCCCC
Q 025563 198 TGSGRFLKEKNPNIKVYGVEPTES 221 (251)
Q Consensus 198 ~Gi~~~~~~~~~~~~vigVep~~s 221 (251)
.++.+.+++.+.++.+++.+....
T Consensus 218 ~~~~~~~~~~g~~~~~~~~~~~~~ 241 (366)
T 3td9_A 218 ALISRQARQLGFTGYILAGDGADA 241 (366)
T ss_dssp HHHHHHHHHTTCCSEEEECGGGCS
T ss_pred HHHHHHHHHcCCCceEEeeCCcCC
Confidence 899999999888888888755443
No 438
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=45.31 E-value=58 Score=27.46 Aligned_cols=53 Identities=13% Similarity=0.067 Sum_probs=34.8
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCc--HHHHHHHH-HcCCEEEEe
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIAS--MERRIVLR-ALGAEVYLA 130 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~~~-~~Ga~v~~v 130 (251)
++.+|+..+|--|.++|....+.|.+++++...+.. ....+.++ ..|.++..+
T Consensus 47 k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 102 (328)
T 2qhx_A 47 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 102 (328)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEE
Confidence 456888888999999999999999988776523321 11223343 456666544
No 439
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=45.11 E-value=31 Score=28.94 Aligned_cols=52 Identities=25% Similarity=0.046 Sum_probs=33.4
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQA 133 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~ 133 (251)
++..++|..+..++..+- .+-.-.|+++...-..-...++..|++++.++..
T Consensus 87 v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 138 (363)
T 3ffh_A 87 LIFTAGVDELIELLTRVL-LDTTTNTVMATPTFVQYRQNALIEGAEVREIPLL 138 (363)
T ss_dssp EEEESSHHHHHHHHHHHH-CSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECC
T ss_pred EEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC
Confidence 777777777777666554 2222244444444455667788899999998754
No 440
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=44.98 E-value=1.2e+02 Score=24.29 Aligned_cols=37 Identities=11% Similarity=0.214 Sum_probs=29.2
Q ss_pred CCCCEEEEecCchhHHHHHHHHHHhhC----CCcEEEEEeCCC
Q 025563 182 GDVDILVAGIGTGGTVTGSGRFLKEKN----PNIKVYGVEPTE 220 (251)
Q Consensus 182 ~~~d~vv~~vGtGg~~~Gi~~~~~~~~----~~~~vigVep~~ 220 (251)
+.+|+||| .+...+.|+..++++.+ .++.|+|.+-..
T Consensus 185 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vvg~d~~~ 225 (291)
T 3egc_A 185 DRPTALLT--SSHRITEGAMQALNVLGLRYGPDVEIVSFDNLP 225 (291)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHHTCCBTTTBEEEEESCCG
T ss_pred CCCcEEEE--CCcHHHHHHHHHHHHcCCCCCCceEEEEecCch
Confidence 56899986 55667789999999986 368999998553
No 441
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=44.93 E-value=44 Score=29.07 Aligned_cols=48 Identities=17% Similarity=0.208 Sum_probs=34.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHH-cCCEEE
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRA-LGAEVY 128 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~-~Ga~v~ 128 (251)
+++ ++..+.|+-|.++|..++.+|.+++++- .++.+++.++. +|+++.
T Consensus 168 g~~-V~ViG~G~iG~~~a~~a~~~Ga~V~~~d---~~~~~l~~~~~~~g~~~~ 216 (377)
T 2vhw_A 168 PAD-VVVIGAGTAGYNAARIANGMGATVTVLD---INIDKLRQLDAEFCGRIH 216 (377)
T ss_dssp CCE-EEEECCSHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHHTTTSSE
T ss_pred CCE-EEEECCCHHHHHHHHHHHhCCCEEEEEe---CCHHHHHHHHHhcCCeeE
Confidence 455 6666679999999999999999755542 23556666655 787753
No 442
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=44.60 E-value=1.4e+02 Score=26.47 Aligned_cols=51 Identities=22% Similarity=0.115 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEEeccChHHHHHHHHHHH-CCCcEEEEecC
Q 025563 59 RIALSMIKDAEE-KGLITPGKSVLIETTGGNTGIGLAFIAAL-RGYKLIIVMPS 110 (251)
Q Consensus 59 R~a~~~l~~a~~-~g~~~~g~~~vv~~ssGN~g~alA~~a~~-~G~~~~ivvp~ 110 (251)
|++.+.++.+.+ .|.--.|.+ ++..+.||-|..+|....+ +|.+++.+.+.
T Consensus 190 ~Gv~~~~~~~~~~~g~~l~g~~-vaVqG~GnVG~~~a~~L~e~~GakvVavsD~ 242 (415)
T 2tmg_A 190 RGVKVCAGLAMDVLGIDPKKAT-VAVQGFGNVGQFAALLISQELGSKVVAVSDS 242 (415)
T ss_dssp HHHHHHHHHHHHHTTCCTTTCE-EEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCcCCCE-EEEECCcHHHHHHHHHHHHhcCCEEEEEEeC
Confidence 677777777654 454223454 8888889999999988877 89888866543
No 443
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=44.23 E-value=1.2e+02 Score=24.19 Aligned_cols=75 Identities=20% Similarity=0.216 Sum_probs=45.7
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCc
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGT 193 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGt 193 (251)
....+.+...|++|+.++.. .+...+...++.+..+...++ +. +....+ ....+..++.++. +.+|.+|..+|.
T Consensus 26 ~~ia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~-~~-Dv~d~~-~v~~~~~~~~~~~-g~id~lv~nAg~ 99 (256)
T 3gaf_A 26 RAIAGTFAKAGASVVVTDLK--SEGAEAVAAAIRQAGGKAIGL-EC-NVTDEQ-HREAVIKAALDQF-GKITVLVNNAGG 99 (256)
T ss_dssp HHHHHHHHHHTCEEEEEESS--HHHHHHHHHHHHHTTCCEEEE-EC-CTTCHH-HHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEE-EC-CCCCHH-HHHHHHHHHHHHc-CCCCEEEECCCC
Confidence 34566677789999999874 333444444554433233333 22 222332 4566667777777 579999999986
Q ss_pred h
Q 025563 194 G 194 (251)
Q Consensus 194 G 194 (251)
.
T Consensus 100 ~ 100 (256)
T 3gaf_A 100 G 100 (256)
T ss_dssp C
T ss_pred C
Confidence 4
No 444
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=44.15 E-value=17 Score=35.17 Aligned_cols=39 Identities=21% Similarity=0.399 Sum_probs=31.1
Q ss_pred HcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEe
Q 025563 70 EKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVM 108 (251)
Q Consensus 70 ~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivv 108 (251)
+.+.+++|++.+|...+|.-|.+....|+.+|.++++..
T Consensus 339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~ 377 (795)
T 3slk_A 339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA 377 (795)
T ss_dssp CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEe
Confidence 345677888866666679999999999999999876654
No 445
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=43.83 E-value=46 Score=27.67 Aligned_cols=88 Identities=17% Similarity=0.209 Sum_probs=53.0
Q ss_pred HHCCCcEEEEecCC--CcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHH
Q 025563 98 ALRGYKLIIVMPSI--ASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPE 175 (251)
Q Consensus 98 ~~~G~~~~ivvp~~--~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 175 (251)
.++.=|+.++.-.. .=....+.+...||+|+.++.. .+...+.++++.. ..+++ +. +-.... ....+..+
T Consensus 25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~--~~~l~~~~~~~g~---~~~~~-~~-Dv~~~~-~v~~~~~~ 96 (273)
T 4fgs_A 25 QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRR--KDVLDAAIAEIGG---GAVGI-QA-DSANLA-ELDRLYEK 96 (273)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHCT---TCEEE-EC-CTTCHH-HHHHHHHH
T ss_pred chhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHcCC---CeEEE-Ee-cCCCHH-HHHHHHHH
Confidence 34555677766432 2345677788899999999874 2333333344421 22322 22 222332 45667778
Q ss_pred HhhhhCCCCCEEEEecCch
Q 025563 176 IWKDSGGDVDILVAGIGTG 194 (251)
Q Consensus 176 I~~q~~~~~d~vv~~vGtG 194 (251)
+.++. +.+|.+|..+|.+
T Consensus 97 ~~~~~-G~iDiLVNNAG~~ 114 (273)
T 4fgs_A 97 VKAEA-GRIDVLFVNAGGG 114 (273)
T ss_dssp HHHHH-SCEEEEEECCCCC
T ss_pred HHHHc-CCCCEEEECCCCC
Confidence 88887 6799999999865
No 446
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=43.77 E-value=69 Score=26.23 Aligned_cols=65 Identities=20% Similarity=0.149 Sum_probs=42.6
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCE-EEEeCCCCChHHHHHHHHHHhhcC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAE-VYLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~-v~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
|++.+|+..++--|+++|....+.|.++++.-..... ....+ .+.++-. +.++..+..++..++.
T Consensus 11 GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~--------~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 76 (261)
T 4h15_A 11 GKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE--------GLPEELFVEADLT-TKEGCAIVAEATRQRL 76 (261)
T ss_dssp TCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT--------TSCTTTEEECCTT-SHHHHHHHHHHHHHHT
T ss_pred CCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh--------CCCcEEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 5666888888899999999999999998876543221 11111 2444443 5566666666666665
No 447
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=43.60 E-value=1.3e+02 Score=24.57 Aligned_cols=145 Identities=10% Similarity=0.074 Sum_probs=77.7
Q ss_pred HHHHHHHHHc-CCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC-------------Cc-----HHHHHHHHH
Q 025563 62 LSMIKDAEEK-GLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI-------------AS-----MERRIVLRA 122 (251)
Q Consensus 62 ~~~l~~a~~~-g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~-------------~~-----~~~~~~~~~ 122 (251)
...+..+.++ +. . .|+...+.....+++-.+...+++++.+.... .+ ....+.+..
T Consensus 58 ~~~~~~l~~~~~v----~-~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 132 (362)
T 3snr_A 58 TTNARRFVTESKA----D-VIMGSSVTPPSVAISNVANEAQIPHIALAPLPITPERAKWSVVMPQPIPIMGKVLYEHMKK 132 (362)
T ss_dssp HHHHHHHHHTSCC----S-EEEECSSHHHHHHHHHHHHHHTCCEEESSCCCCCTTTTTTEEECSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCc----e-EEEcCCCcHHHHHHHHHHHHcCccEEEecCCccccCCCCcEEecCCChHHHHHHHHHHHHh
Confidence 3444555555 33 2 26655555566677777888999987754110 01 122445556
Q ss_pred cCC-EEEEeCCCCCh-HHHHHHHHHHhhcCCCeE----ecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhH
Q 025563 123 LGA-EVYLADQAGGF-EGILRKGEEILSNTPNGF----MFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGT 196 (251)
Q Consensus 123 ~Ga-~v~~v~~~~~~-~~~~~~a~~~~~~~~~~~----~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~ 196 (251)
+|. +|..+.....+ .++.+..++..++.+..+ ++.. +.. .+.....++.+ ..||.||++ +.+..
T Consensus 133 ~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~-~~~-----~~~~~~~~l~~---~~~dav~~~-~~~~~ 202 (362)
T 3snr_A 133 NNVKTVGYIGYSDSYGDLWFNDLKKQGEAMGLKIVGEERFAR-PDT-----SVAGQALKLVA---ANPDAILVG-ASGTA 202 (362)
T ss_dssp TTCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECT-TCS-----CCHHHHHHHHH---HCCSEEEEE-CCHHH
T ss_pred cCCCEEEEEecCchHHHHHHHHHHHHHHHcCCEEEEEeecCC-CCC-----CHHHHHHHHHh---cCCCEEEEe-cCcch
Confidence 674 45555332222 233344455555552221 1111 111 11222223333 358988775 46777
Q ss_pred HHHHHHHHHhhCCCcEEEEEeCCCC
Q 025563 197 VTGSGRFLKEKNPNIKVYGVEPTES 221 (251)
Q Consensus 197 ~~Gi~~~~~~~~~~~~vigVep~~s 221 (251)
+.++.+.+++.+-+++++++.....
T Consensus 203 a~~~~~~~~~~g~~~p~i~~~g~~~ 227 (362)
T 3snr_A 203 AALPQTTLRERGYNGLIYQTHGAAS 227 (362)
T ss_dssp HHHHHHHHHHTTCCSEEEECGGGCS
T ss_pred HHHHHHHHHHcCCCccEEeccCcCc
Confidence 8899999999888888877755443
No 448
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=43.58 E-value=98 Score=27.75 Aligned_cols=97 Identities=19% Similarity=0.186 Sum_probs=58.6
Q ss_pred CCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCC
Q 025563 72 GLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTP 151 (251)
Q Consensus 72 g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~ 151 (251)
+..-.|++ ++..+-|+-|+++|..++.+|.+++++ .. .+.+.......|.++. +.+ ++.++.
T Consensus 206 g~~L~Gkt-VgIiG~G~IG~~vA~~Lka~Ga~Viv~-D~--~p~~a~~A~~~G~~~~------sL~-------eal~~A- 267 (436)
T 3h9u_A 206 DVMIAGKT-ACVCGYGDVGKGCAAALRGFGARVVVT-EV--DPINALQAAMEGYQVL------LVE-------DVVEEA- 267 (436)
T ss_dssp CCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEE-CS--CHHHHHHHHHTTCEEC------CHH-------HHTTTC-
T ss_pred CCcccCCE-EEEEeeCHHHHHHHHHHHHCCCEEEEE-CC--ChhhhHHHHHhCCeec------CHH-------HHHhhC-
Confidence 54445666 888889999999999999999986554 22 3445555556777543 222 223332
Q ss_pred CeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhH
Q 025563 152 NGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGT 196 (251)
Q Consensus 152 ~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~ 196 (251)
+.+.... .+...+ ..|.++++ +++.+|+-+|-|..
T Consensus 268 DVVilt~-gt~~iI-------~~e~l~~M--K~gAIVINvgRg~v 302 (436)
T 3h9u_A 268 HIFVTTT-GNDDII-------TSEHFPRM--RDDAIVCNIGHFDT 302 (436)
T ss_dssp SEEEECS-SCSCSB-------CTTTGGGC--CTTEEEEECSSSGG
T ss_pred CEEEECC-CCcCcc-------CHHHHhhc--CCCcEEEEeCCCCC
Confidence 4444322 122211 22456666 36789999988774
No 449
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=43.45 E-value=1.2e+02 Score=24.06 Aligned_cols=91 Identities=14% Similarity=0.127 Sum_probs=49.9
Q ss_pred CEEEEeCCCCCh---HHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHH
Q 025563 125 AEVYLADQAGGF---EGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSG 201 (251)
Q Consensus 125 a~v~~v~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~ 201 (251)
-+|..+.+..+. .++.+-.++..++++..+ ..........+.++. ...+++++- ++||+|||. +...+.|+.
T Consensus 132 ~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~-~~~~~~~~~~~~~~~-~~~~~l~~~-~~~~ai~~~--~d~~a~g~~ 206 (289)
T 3brs_A 132 GKIGVISFVKNSKTAMDREEGLKIGLSDDSNKI-EAIYYCDSNYDKAYD-GTVELLTKY-PDISVMVGL--NQYSATGAA 206 (289)
T ss_dssp CEEEEEESCTTSHHHHHHHHHHHHHHGGGGGGE-EEEEECTTCHHHHHH-HHHHHHHHC-TTEEEEEES--SHHHHHHHH
T ss_pred ceEEEEECCCCCccHHHHHHHHHHHHHhCCCcE-EeeecCCCCHHHHHH-HHHHHHHhC-CCceEEEEC--CCcchHHHH
Confidence 577777543222 233333444455543221 111111122333433 344555442 568888874 556778999
Q ss_pred HHHHhhCC--CcEEEEEeCCC
Q 025563 202 RFLKEKNP--NIKVYGVEPTE 220 (251)
Q Consensus 202 ~~~~~~~~--~~~vigVep~~ 220 (251)
.++++.+- ++.|+|.+-..
T Consensus 207 ~al~~~G~~~di~vvg~d~~~ 227 (289)
T 3brs_A 207 RAIKDMSLEAKVKLVCIDSSM 227 (289)
T ss_dssp HHHHHTTCTTTSEEEEEESCS
T ss_pred HHHHhcCCCCCEEEEEECCCH
Confidence 99998763 59999998654
No 450
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=43.36 E-value=64 Score=29.10 Aligned_cols=50 Identities=18% Similarity=0.075 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 59 RIALSMIKDAEE-KGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 59 R~a~~~l~~a~~-~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
|++.+.++.+.+ .|.--.|++ ++..+.||-|..+|......|.+++.+.+
T Consensus 211 ~Gv~~~~~~~~~~~G~~l~g~~-v~VqG~GnVG~~~a~~L~~~GakvVavsD 261 (449)
T 1bgv_A 211 YGSVYYVEAVMKHENDTLVGKT-VALAGFGNVAWGAAKKLAELGAKAVTLSG 261 (449)
T ss_dssp HHHHHHHHHHHHHTTCCSTTCE-EEECCSSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHccCCcCCCE-EEEECCCHHHHHHHHHHHHCCCEEEEEEe
Confidence 677777777654 453224454 88888999999999999999999987654
No 451
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=43.27 E-value=47 Score=26.63 Aligned_cols=66 Identities=20% Similarity=0.164 Sum_probs=38.7
Q ss_pred EEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHH-HHHcCCEEEE--eCCCCChHHHHHHHHHHhhc
Q 025563 80 VLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIV-LRALGAEVYL--ADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 80 ~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~-~~~~Ga~v~~--v~~~~~~~~~~~~a~~~~~~ 149 (251)
.+|+..+|--|+++|....+.|.+++++... ..+.+. .+.++.++.. ++-. +.++..+..++..++
T Consensus 3 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~ 71 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFIQQGHKVIATGRR---QERLQELKDELGDNLYIAQLDVR-NRAAIEEMLASLPAE 71 (248)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEECCTT-CHHHHHHHHHTSCTT
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhcCceEEEEcCCC-CHHHHHHHHHHHHHh
Confidence 4777888999999999999999987766432 233322 2333444444 4432 344444444444443
No 452
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=43.24 E-value=49 Score=26.77 Aligned_cols=65 Identities=22% Similarity=0.166 Sum_probs=40.8
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhc
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~ 149 (251)
++.+|+..+|--|.++|..-.+.|.+++++........ ...++.+.++-. +.++..+..++..++
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 93 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA------DPDIHTVAGDIS-KPETADRIVREGIER 93 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS------STTEEEEESCTT-SHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc------cCceEEEEccCC-CHHHHHHHHHHHHHH
Confidence 45588888899999999999999999888764432111 113444555543 445555555555444
No 453
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=43.03 E-value=89 Score=24.89 Aligned_cols=86 Identities=15% Similarity=0.188 Sum_probs=47.0
Q ss_pred cEEEEecCC--CcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCC-Ce-EecCCCCCCchHHHHHhhHHHHHhh
Q 025563 103 KLIIVMPSI--ASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTP-NG-FMFRQFENPANPKIHYETTGPEIWK 178 (251)
Q Consensus 103 ~~~ivvp~~--~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~-~~-~~~~~~~n~~~~~~g~~t~~~EI~~ 178 (251)
+.+++.-.. .=....+.+...|++|+.++.. .+...+.+.++.+... .. ++.-..+. ...+ ....+..++.+
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~-~~~~~~~~~~~ 88 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRN--EEKLRQVASHINEETGRQPQWFILDLLT-CTSE-NCQQLAQRIAV 88 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHSCCCEEEECCTTT-CCHH-HHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhhcCCCceEEEEeccc-CCHH-HHHHHHHHHHH
Confidence 445554332 2245566777889999999874 3333334444433321 12 22222211 1222 44556666666
Q ss_pred hhCCCCCEEEEecCc
Q 025563 179 DSGGDVDILVAGIGT 193 (251)
Q Consensus 179 q~~~~~d~vv~~vGt 193 (251)
+. +.+|.+|..+|.
T Consensus 89 ~~-g~id~lv~nAg~ 102 (252)
T 3f1l_A 89 NY-PRLDGVLHNAGL 102 (252)
T ss_dssp HC-SCCSEEEECCCC
T ss_pred hC-CCCCEEEECCcc
Confidence 65 679999999986
No 454
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=42.89 E-value=1.2e+02 Score=25.25 Aligned_cols=45 Identities=16% Similarity=-0.046 Sum_probs=33.6
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHH
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRA 122 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~ 122 (251)
++.+|+..+|.-|.+++......|.+++++..... ...++..++.
T Consensus 26 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~ 71 (351)
T 3ruf_A 26 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKT 71 (351)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhh
Confidence 45588888999999999999999999888875432 3445554444
No 455
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=42.86 E-value=61 Score=28.34 Aligned_cols=59 Identities=15% Similarity=0.207 Sum_probs=37.6
Q ss_pred cCCCCCCCeEEEEeccC--hHHHHHHHHHHHCCCcEEEEecCCCcH----HHHHH----HHHcCCEEEEeC
Q 025563 71 KGLITPGKSVLIETTGG--NTGIGLAFIAALRGYKLIIVMPSIASM----ERRIV----LRALGAEVYLAD 131 (251)
Q Consensus 71 ~g~~~~g~~~vv~~ssG--N~g~alA~~a~~~G~~~~ivvp~~~~~----~~~~~----~~~~Ga~v~~v~ 131 (251)
.|.++ |.+ |+..+.+ |.+.+++.+++++|++++++.|+...+ .-++. ++..|+.+..+.
T Consensus 175 ~G~l~-glk-va~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~ 243 (365)
T 4amu_A 175 FGNLK-NKK-IVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFST 243 (365)
T ss_dssp HSSCT-TCE-EEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEES
T ss_pred hCCCC-CCE-EEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEEC
Confidence 35433 344 5555554 789999999999999999999886432 32222 344566665543
No 456
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=42.67 E-value=72 Score=24.64 Aligned_cols=48 Identities=10% Similarity=0.004 Sum_probs=33.0
Q ss_pred EEEEeccChHHHHHHHHHH-HCCCcEEEEecCCCcHH-HHHHHHHcCCEEEEe
Q 025563 80 VLIETTGGNTGIGLAFIAA-LRGYKLIIVMPSIASME-RRIVLRALGAEVYLA 130 (251)
Q Consensus 80 ~vv~~ssGN~g~alA~~a~-~~G~~~~ivvp~~~~~~-~~~~~~~~Ga~v~~v 130 (251)
.+|+..+|..|.+++.... ..|.+++++... +. +.+.+...+.++..+
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~---~~~~~~~~~~~~~~~~~~ 57 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQ---LKTRIPPEIIDHERVTVI 57 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESS---HHHHSCHHHHTSTTEEEE
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecC---ccccchhhccCCCceEEE
Confidence 4888888999999999988 899998887643 33 444442234444443
No 457
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=42.64 E-value=1.4e+02 Score=24.62 Aligned_cols=33 Identities=21% Similarity=0.307 Sum_probs=27.8
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEecC
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMPS 110 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~ 110 (251)
++.+|+..+|--|.+++......|.+++++...
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecC
Confidence 456888889999999999999999998887643
No 458
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=42.61 E-value=47 Score=23.48 Aligned_cols=48 Identities=13% Similarity=0.054 Sum_probs=33.4
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLAD 131 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~ 131 (251)
++..+.|..|..++......|.+++++-. .+.+.+.++..|.+++..+
T Consensus 9 v~I~G~G~iG~~~a~~l~~~g~~v~~~d~---~~~~~~~~~~~~~~~~~~d 56 (144)
T 2hmt_A 9 FAVIGLGRFGGSIVKELHRMGHEVLAVDI---NEEKVNAYASYATHAVIAN 56 (144)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCEEEES---CHHHHHTTTTTCSEEEECC
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHhCCEEEEeC
Confidence 45555699999999999999998776643 3455555555676655444
No 459
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=42.61 E-value=91 Score=26.61 Aligned_cols=109 Identities=14% Similarity=0.042 Sum_probs=52.0
Q ss_pred CcEEEEecCCCcHHHHHHHHHcC-CEEEEeCCCCChHHHHHHHHHHhhcCCCe-E--ecCCCCCCchHHHHHhhHHHHHh
Q 025563 102 YKLIIVMPSIASMERRIVLRALG-AEVYLADQAGGFEGILRKGEEILSNTPNG-F--MFRQFENPANPKIHYETTGPEIW 177 (251)
Q Consensus 102 ~~~~ivvp~~~~~~~~~~~~~~G-a~v~~v~~~~~~~~~~~~a~~~~~~~~~~-~--~~~~~~n~~~~~~g~~t~~~EI~ 177 (251)
.+..++.-.+.-...-+.++.+| -++..|.+....+...+...+..++. +. + |.. ..|| .. ....++
T Consensus 11 ~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~~~~~~~~~~v~~~L~~~-g~~~~~~~~-~~~~-~~-----~~v~~~- 81 (354)
T 3ce9_A 11 IPLILEVGNNKIYNIGQIIKKGNFKRVSLYFGEGIYELFGETIEKSIKSS-NIEIEAVET-VKNI-DF-----DEIGTN- 81 (354)
T ss_dssp CCSEEEEESSCGGGHHHHHGGGTCSEEEEEEETTHHHHHHHHHHHHHHTT-TCEEEEEEE-ECCC-BH-----HHHHHH-
T ss_pred CCcEEEECCCHHHHHHHHHHhcCCCeEEEEECccHHHHHHHHHHHHHHHc-CCeEEEEec-CCCC-CH-----HHHHHH-
Confidence 34445554444333344556666 35555543322233334444444443 31 2 221 2344 22 133455
Q ss_pred hhhCCCCCEEEEecCchhHHHHHHHHHHhhCCCcEEEEEeCCCC
Q 025563 178 KDSGGDVDILVAGIGTGGTVTGSGRFLKEKNPNIKVYGVEPTES 221 (251)
Q Consensus 178 ~q~~~~~d~vv~~vGtGg~~~Gi~~~~~~~~~~~~vigVep~~s 221 (251)
+++...-..+|+++|+|..+ -++++... ...++++.|-...+
T Consensus 82 ~~~~~~~~d~IIavGGGsv~-D~aK~vA~-~~~~p~i~IPTT~~ 123 (354)
T 3ce9_A 82 AFKIPAEVDALIGIGGGKAI-DAVKYMAF-LRKLPFISVPTSTS 123 (354)
T ss_dssp HTTSCTTCCEEEEEESHHHH-HHHHHHHH-HHTCCEEEEESCCS
T ss_pred HHhhhcCCCEEEEECChHHH-HHHHHHHh-hcCCCEEEecCccc
Confidence 55433223467799988753 44444442 23478888866543
No 460
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=42.22 E-value=1.4e+02 Score=25.44 Aligned_cols=117 Identities=12% Similarity=0.085 Sum_probs=69.7
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMF 156 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~ 156 (251)
|++ +..-+-|+-|+++|..++.+|++++++-+... ... ...|++. + +.+ ++.++. +.+.+
T Consensus 141 g~t-vgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~----~~~g~~~--~----~l~-------ell~~a-DvV~l 200 (334)
T 2pi1_A 141 RLT-LGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKR-EDL----KEKGCVY--T----SLD-------ELLKES-DVISL 200 (334)
T ss_dssp GSE-EEEECCSHHHHHHHHHHHHTTCEEEEECSSCC-HHH----HHTTCEE--C----CHH-------HHHHHC-SEEEE
T ss_pred Cce-EEEECcCHHHHHHHHHHHHCcCEEEEECCCcc-hhh----HhcCcee--c----CHH-------HHHhhC-CEEEE
Confidence 344 77778899999999999999999877755443 221 1356543 2 122 233333 55555
Q ss_pred CCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhH--HHHHHHHHHhhCCCcEEEEEeCCCC
Q 025563 157 RQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGT--VTGSGRFLKEKNPNIKVYGVEPTES 221 (251)
Q Consensus 157 ~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~--~~Gi~~~~~~~~~~~~vigVep~~s 221 (251)
.--.++... .-+..+.++++ ++..+++-+|.|+. -..+..++++. .+.=.+.+....
T Consensus 201 ~~P~t~~t~----~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~g--~i~gA~lDV~~~ 259 (334)
T 2pi1_A 201 HVPYTKETH----HMINEERISLM--KDGVYLINTARGKVVDTDALYRAYQRG--KFSGLGLDVFED 259 (334)
T ss_dssp CCCCCTTTT----TCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHTT--CEEEEEESCCTT
T ss_pred eCCCChHHH----HhhCHHHHhhC--CCCcEEEECCCCcccCHHHHHHHHHhC--CceEEEeecCCC
Confidence 422222221 22345667777 46899999999985 45566666542 244445555443
No 461
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=42.11 E-value=1.4e+02 Score=24.32 Aligned_cols=86 Identities=14% Similarity=0.177 Sum_probs=50.5
Q ss_pred cEEEEecCC--CcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhh
Q 025563 103 KLIIVMPSI--ASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDS 180 (251)
Q Consensus 103 ~~~ivvp~~--~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~ 180 (251)
+.+++.-.. .-....+.+...|++|+.++.. .+...+.+.++.+......++ +. +....+ ....+..++.++.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~-~~-Dv~d~~-~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRT--RTEVEEVADEIVGAGGQAIAL-EA-DVSDEL-QMRNAVRDLVLKF 103 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS--HHHHHHHHHHHTTTTCCEEEE-EC-CTTCHH-HHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEE-Ec-cCCCHH-HHHHHHHHHHHHh
Confidence 455555332 2245567777889999999874 334444445554433222332 22 222332 4556667777777
Q ss_pred CCCCCEEEEecCch
Q 025563 181 GGDVDILVAGIGTG 194 (251)
Q Consensus 181 ~~~~d~vv~~vGtG 194 (251)
+.+|.+|..+|..
T Consensus 104 -g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 104 -GHLDIVVANAGIN 116 (283)
T ss_dssp -SCCCEEEECCCCC
T ss_pred -CCCCEEEECCCCC
Confidence 5799999999853
No 462
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=41.93 E-value=1.5e+02 Score=25.38 Aligned_cols=114 Identities=17% Similarity=0.097 Sum_probs=56.7
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMF 156 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~ 156 (251)
|++ +..-+.|+-|.++|..++.+|+++.++-+.... ..+++ ... +. .++.++. +.+.+
T Consensus 171 gkt-iGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~--------~~~~~--~~~---sl-------~ell~~a-DvVil 228 (340)
T 4dgs_A 171 GKR-IGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS--------GVDWI--AHQ---SP-------VDLARDS-DVLAV 228 (340)
T ss_dssp TCE-EEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT--------TSCCE--ECS---SH-------HHHHHTC-SEEEE
T ss_pred CCE-EEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc--------ccCce--ecC---CH-------HHHHhcC-CEEEE
Confidence 444 777788999999999999999987766443322 12222 111 22 2334443 55554
Q ss_pred CCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHH--HHHHHHHhhCCCcEEEEEeCCC
Q 025563 157 RQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVT--GSGRFLKEKNPNIKVYGVEPTE 220 (251)
Q Consensus 157 ~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~--Gi~~~~~~~~~~~~vigVep~~ 220 (251)
.--.++. -...+..++++.++ ++.+++-++.|+..- .+..++++ .++.-.+.+...
T Consensus 229 ~vP~t~~----t~~li~~~~l~~mk--~gailIN~aRG~vvde~aL~~aL~~--g~i~gA~LDVf~ 286 (340)
T 4dgs_A 229 CVAASAA----TQNIVDASLLQALG--PEGIVVNVARGNVVDEDALIEALKS--GTIAGAGLDVFV 286 (340)
T ss_dssp CC--------------CHHHHHHTT--TTCEEEECSCC----------------CCSSEEEESCCS
T ss_pred eCCCCHH----HHHHhhHHHHhcCC--CCCEEEECCCCcccCHHHHHHHHHc--CCceEEEeCCcC
Confidence 3221221 12234457777773 688999999998653 33444433 234445555443
No 463
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=41.84 E-value=99 Score=25.00 Aligned_cols=66 Identities=14% Similarity=0.091 Sum_probs=42.3
Q ss_pred CCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhc
Q 025563 76 PGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSN 149 (251)
Q Consensus 76 ~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~ 149 (251)
.+++.+|+..+|--|+++|..-.+.|.+++++....... .-.++.+.++-. +.++..+..++..++
T Consensus 13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~Dv~-~~~~v~~~~~~~~~~ 78 (269)
T 3vtz_A 13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-------VNVSDHFKIDVT-NEEEVKEAVEKTTKK 78 (269)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-------TTSSEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-------cCceeEEEecCC-CHHHHHHHHHHHHHH
Confidence 356668888889999999999999999987765432211 113455666654 455555555555544
No 464
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=41.65 E-value=1.7e+02 Score=25.17 Aligned_cols=118 Identities=14% Similarity=0.106 Sum_probs=71.2
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEec
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMF 156 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~ 156 (251)
|++ +-.-+.|+-|.++|..++.+|++++.+-+...+... .+..|++. ++ +. .++.++. +.+.+
T Consensus 164 gkt-vGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~---~~~~g~~~--~~---~l-------~ell~~a-DvV~l 226 (351)
T 3jtm_A 164 GKT-IGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPEL---EKETGAKF--VE---DL-------NEMLPKC-DVIVI 226 (351)
T ss_dssp TCE-EEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHH---HHHHCCEE--CS---CH-------HHHGGGC-SEEEE
T ss_pred CCE-EeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHH---HHhCCCeE--cC---CH-------HHHHhcC-CEEEE
Confidence 454 777888999999999999999996666544333333 33456542 22 22 2344444 55555
Q ss_pred CCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhH--HHHHHHHHHhhCCCcEEEEEeCC
Q 025563 157 RQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGT--VTGSGRFLKEKNPNIKVYGVEPT 219 (251)
Q Consensus 157 ~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~--~~Gi~~~~~~~~~~~~vigVep~ 219 (251)
.--.++... .-+..+.+.++ +++.+++-++.|+. -..+..++++. .+.-.+.+..
T Consensus 227 ~~Plt~~t~----~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~g--~i~ga~lDV~ 283 (351)
T 3jtm_A 227 NMPLTEKTR----GMFNKELIGKL--KKGVLIVNNARGAIMERQAVVDAVESG--HIGGYSGDVW 283 (351)
T ss_dssp CSCCCTTTT----TCBSHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHHT--SEEEEEESCC
T ss_pred CCCCCHHHH----HhhcHHHHhcC--CCCCEEEECcCchhhCHHHHHHHHHhC--CccEEEeCCC
Confidence 422222221 22345777777 46899999999986 35566677653 2444455543
No 465
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=41.39 E-value=30 Score=27.50 Aligned_cols=30 Identities=23% Similarity=0.350 Sum_probs=26.9
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPS 110 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~ 110 (251)
|+.-.+|..|.++|...++.|++++++-..
T Consensus 6 VvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 6 VLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 788889999999999999999999988654
No 466
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=41.07 E-value=1.3e+02 Score=23.59 Aligned_cols=47 Identities=15% Similarity=0.074 Sum_probs=32.9
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
++..+.|..|..+|......|. ++ ++..+ +.+++.++ .|.+++.-+.
T Consensus 12 viI~G~G~~G~~la~~L~~~g~-v~-vid~~--~~~~~~~~-~~~~~i~gd~ 58 (234)
T 2aef_A 12 VVICGWSESTLECLRELRGSEV-FV-LAEDE--NVRKKVLR-SGANFVHGDP 58 (234)
T ss_dssp EEEESCCHHHHHHHHHSTTSEE-EE-EESCG--GGHHHHHH-TTCEEEESCT
T ss_pred EEEECCChHHHHHHHHHHhCCe-EE-EEECC--HHHHHHHh-cCCeEEEcCC
Confidence 6777789999999998888887 44 44333 44555666 7877766554
No 467
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=41.00 E-value=1.5e+02 Score=24.34 Aligned_cols=53 Identities=28% Similarity=0.265 Sum_probs=35.9
Q ss_pred EEEEeccChHHHHHHHHHHHCCCcEEEEecC--CCcHHHHHHHHHcC-CEEEEeCC
Q 025563 80 VLIETTGGNTGIGLAFIAALRGYKLIIVMPS--IASMERRIVLRALG-AEVYLADQ 132 (251)
Q Consensus 80 ~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~--~~~~~~~~~~~~~G-a~v~~v~~ 132 (251)
.+|+..+|.-|.+++......|.+++++... .........++..+ .+++..+-
T Consensus 4 vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl 59 (347)
T 1orr_A 4 LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDI 59 (347)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCT
T ss_pred EEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCC
Confidence 4788888999999999998899998887642 22233444455444 55555443
No 468
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=40.89 E-value=86 Score=25.28 Aligned_cols=32 Identities=25% Similarity=0.266 Sum_probs=26.4
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
++.+|+..+|.-|+++|....+.|.+++++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 45588888899999999999999998777654
No 469
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=40.77 E-value=1.1e+02 Score=25.29 Aligned_cols=75 Identities=16% Similarity=0.162 Sum_probs=45.1
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCC-CeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecC
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTP-NGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIG 192 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vG 192 (251)
....+.+...|++|+.++.. .+...+.+.++.+..+ ...++ +. +-...+ ....+..++.++. +.+|.+|..+|
T Consensus 55 ~aia~~la~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~-~~-Dv~d~~-~v~~~~~~~~~~~-g~iD~lvnnAg 128 (293)
T 3rih_A 55 RGIATVFARAGANVAVAARS--PRELSSVTAELGELGAGNVIGV-RL-DVSDPG-SCADAARTVVDAF-GALDVVCANAG 128 (293)
T ss_dssp HHHHHHHHHTTCEEEEEESS--GGGGHHHHHHHTTSSSSCEEEE-EC-CTTCHH-HHHHHHHHHHHHH-SCCCEEEECCC
T ss_pred HHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhhCCCcEEEE-EE-eCCCHH-HHHHHHHHHHHHc-CCCCEEEECCC
Confidence 45567777889999999864 2333344455544321 22222 22 222332 4456667777777 57999999998
Q ss_pred ch
Q 025563 193 TG 194 (251)
Q Consensus 193 tG 194 (251)
..
T Consensus 129 ~~ 130 (293)
T 3rih_A 129 IF 130 (293)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 470
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=40.68 E-value=1e+02 Score=25.58 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=26.9
Q ss_pred CeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 78 KSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 78 ~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
++.+|+..+|.-|.+++......|.+++++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 34 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN 34 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEec
Confidence 34588888899999999998889999888764
No 471
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=40.63 E-value=55 Score=27.44 Aligned_cols=52 Identities=17% Similarity=0.209 Sum_probs=31.1
Q ss_pred EEEEeccChHHHHHHHHHHH----CCCcEEEEecCCCcHHH-HHHHHHcCCEEEEeCC
Q 025563 80 VLIETTGGNTGIGLAFIAAL----RGYKLIIVMPSIASMER-RIVLRALGAEVYLADQ 132 (251)
Q Consensus 80 ~vv~~ssGN~g~alA~~a~~----~G~~~~ivvp~~~~~~~-~~~~~~~Ga~v~~v~~ 132 (251)
.++..++|..+..++..+-. -|= -+++......... ...++..|++++.++.
T Consensus 61 ~v~~~~g~t~al~~~~~~~~~~~~~gd-~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~ 117 (385)
T 2bkw_A 61 PFVLAGSGTLGWDIFASNFILSKAPNK-NVLVVSTGTFSDRFADCLRSYGAQVDVVRP 117 (385)
T ss_dssp EEEEESCTTHHHHHHHHHHSCTTCSCC-EEEEECSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred eEEEcCchHHHHHHHHHHHhccCCCCC-eEEEEcCCcchHHHHHHHHHcCCceEEEec
Confidence 37777778887777766542 333 2333322222222 3567889999999875
No 472
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=40.42 E-value=62 Score=28.33 Aligned_cols=52 Identities=17% Similarity=0.030 Sum_probs=35.5
Q ss_pred EEEeccChHHHHHHHHHHH---------CCC---cEEEEecCCCcHHHHHHHHHcCCEEEEeCCC
Q 025563 81 LIETTGGNTGIGLAFIAAL---------RGY---KLIIVMPSIASMERRIVLRALGAEVYLADQA 133 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~---------~G~---~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~ 133 (251)
++..++|..+..+|..+.+ -|+ +-.|+++. .-..-.+.++.+|++++.++..
T Consensus 106 ~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~ 169 (452)
T 2dgk_A 106 GTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMR 169 (452)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCB
T ss_pred eEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecC
Confidence 5566666666666654432 453 23667777 7777778889999999999753
No 473
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=40.34 E-value=1.6e+02 Score=24.56 Aligned_cols=36 Identities=17% Similarity=0.304 Sum_probs=28.8
Q ss_pred CCCCEEEEecCchhHHHHHHHHHHhhC----CCcEEEEEeCC
Q 025563 182 GDVDILVAGIGTGGTVTGSGRFLKEKN----PNIKVYGVEPT 219 (251)
Q Consensus 182 ~~~d~vv~~vGtGg~~~Gi~~~~~~~~----~~~~vigVep~ 219 (251)
+.||+|||. +...+.|+..++++.+ .++.|+|.+-.
T Consensus 267 ~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvigfD~~ 306 (366)
T 3h5t_A 267 PDLTAVLCT--VDALAFGVLEYLKSVGKSAPADLSLTGFDGT 306 (366)
T ss_dssp TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECC
T ss_pred CCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEECCC
Confidence 568999985 4567779999999986 36899999854
No 474
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=40.31 E-value=1.5e+02 Score=24.08 Aligned_cols=87 Identities=17% Similarity=0.174 Sum_probs=48.3
Q ss_pred cEEEEecCC--CcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhh
Q 025563 103 KLIIVMPSI--ASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDS 180 (251)
Q Consensus 103 ~~~ivvp~~--~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~ 180 (251)
+.+++.-.. .=....+.+...|++|+.++.. +.+...+.+.++.+..+...++ +. +....+ ....+..++.++.
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-Dv~d~~-~v~~~~~~~~~~~ 105 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIG-DAEGVAPVIAELSGLGARVIFL-RA-DLADLS-SHQATVDAVVAEF 105 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-CHHHHHHHHHHHHHTTCCEEEE-EC-CTTSGG-GHHHHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHHHhcCCcEEEE-Ee-cCCCHH-HHHHHHHHHHHHc
Confidence 445554332 2245667777889999998753 2333444445554433233332 22 122221 3455666777777
Q ss_pred CCCCCEEEEecCch
Q 025563 181 GGDVDILVAGIGTG 194 (251)
Q Consensus 181 ~~~~d~vv~~vGtG 194 (251)
+.+|.+|..+|..
T Consensus 106 -g~iD~lvnnAg~~ 118 (280)
T 4da9_A 106 -GRIDCLVNNAGIA 118 (280)
T ss_dssp -SCCCEEEEECC--
T ss_pred -CCCCEEEECCCcc
Confidence 5799999999973
No 475
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=40.24 E-value=30 Score=28.64 Aligned_cols=72 Identities=11% Similarity=-0.034 Sum_probs=40.4
Q ss_pred EEEeccChH----H-HHHHHHHHHCCCcEEEEe--cCCCcHHHHHHHHHcCCEEEE-eCCCCChHHHHHHHHHHhhcCCC
Q 025563 81 LIETTGGNT----G-IGLAFIAALRGYKLIIVM--PSIASMERRIVLRALGAEVYL-ADQAGGFEGILRKGEEILSNTPN 152 (251)
Q Consensus 81 vv~~ssGN~----g-~alA~~a~~~G~~~~ivv--p~~~~~~~~~~~~~~Ga~v~~-v~~~~~~~~~~~~a~~~~~~~~~ 152 (251)
++..+=-|- | -..+..|+..|+..+|+. |-.....-.+.++.+|-+++. +.+. +-+ ++.+++++...+
T Consensus 91 ivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~-t~~---eRi~~ia~~a~g 166 (252)
T 3tha_A 91 LVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVT-TPK---ERVKKLVKHAKG 166 (252)
T ss_dssp EEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETT-SCH---HHHHHHHTTCCS
T ss_pred EEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCC-CcH---HHHHHHHHhCCC
Confidence 555544452 2 225666778888888775 333345667778888887765 4433 123 344445444445
Q ss_pred eEec
Q 025563 153 GFMF 156 (251)
Q Consensus 153 ~~~~ 156 (251)
..|+
T Consensus 167 FiY~ 170 (252)
T 3tha_A 167 FIYL 170 (252)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 5443
No 476
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=40.13 E-value=1.5e+02 Score=24.00 Aligned_cols=75 Identities=16% Similarity=0.122 Sum_probs=46.0
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCc
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGT 193 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGt 193 (251)
....+.+...|++|+.++.. .+...+.++++.+..+...++ +. +....+ ....+..++.++. +.+|.+|..+|.
T Consensus 40 ~aia~~la~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~-~~-Dv~d~~-~v~~~~~~~~~~~-g~iD~lv~nAg~ 113 (271)
T 4ibo_A 40 RAMAEGLAVAGARILINGTD--PSRVAQTVQEFRNVGHDAEAV-AF-DVTSES-EIIEAFARLDEQG-IDVDILVNNAGI 113 (271)
T ss_dssp HHHHHHHHHTTCEEEECCSC--HHHHHHHHHHHHHTTCCEEEC-CC-CTTCHH-HHHHHHHHHHHHT-CCCCEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCceEEE-Ec-CCCCHH-HHHHHHHHHHHHC-CCCCEEEECCCC
Confidence 45677777889999999874 344444455554443233332 33 222332 4455666777666 579999999985
Q ss_pred h
Q 025563 194 G 194 (251)
Q Consensus 194 G 194 (251)
.
T Consensus 114 ~ 114 (271)
T 4ibo_A 114 Q 114 (271)
T ss_dssp C
T ss_pred C
Confidence 4
No 477
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=40.12 E-value=1.5e+02 Score=24.27 Aligned_cols=37 Identities=24% Similarity=0.250 Sum_probs=28.8
Q ss_pred CCCCEEEEecCchhHHHHHHHHHHhhC-CCcEEEEEeCCC
Q 025563 182 GDVDILVAGIGTGGTVTGSGRFLKEKN-PNIKVYGVEPTE 220 (251)
Q Consensus 182 ~~~d~vv~~vGtGg~~~Gi~~~~~~~~-~~~~vigVep~~ 220 (251)
+++|+|||. +...+.|+..++++.+ .++.|+|.+-..
T Consensus 233 ~~~~ai~~~--nd~~A~g~~~al~~~g~~di~vvg~D~~~ 270 (342)
T 1jx6_A 233 PDVDFIYAC--STDVALGAVDALAELGREDIMINGWGGGS 270 (342)
T ss_dssp CCCSEEEES--SHHHHHHHHHHHHHHTCTTSEEBCSBCCH
T ss_pred CCccEEEEC--CChhHHHHHHHHHHcCCCCcEEEEeCCCH
Confidence 568999874 5667889999999876 478888887654
No 478
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=40.10 E-value=1.7e+02 Score=25.29 Aligned_cols=30 Identities=20% Similarity=0.228 Sum_probs=22.0
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPS 110 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~ 110 (251)
|+..++|..|+.++.+++++|++++++-+.
T Consensus 22 ili~g~g~~g~~~~~a~~~~G~~v~~v~~~ 51 (433)
T 2dwc_A 22 ILLLGSGELGKEIAIEAQRLGVEVVAVDRY 51 (433)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 555566778888888888888887776543
No 479
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=40.09 E-value=1.5e+02 Score=23.99 Aligned_cols=75 Identities=16% Similarity=0.138 Sum_probs=45.1
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCc
Q 025563 114 MERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGT 193 (251)
Q Consensus 114 ~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGt 193 (251)
....+.+...|++|+.++.. .+...+.+.++.+.. +.....+. +-...+ ....+..++.++. +.+|.+|..+|.
T Consensus 18 ~aia~~la~~G~~V~~~~r~--~~~~~~~~~~l~~~~-~~~~~~~~-Dv~d~~-~v~~~~~~~~~~~-g~iD~lVnnAG~ 91 (264)
T 3tfo_A 18 EGIARELGVAGAKILLGARR--QARIEAIATEIRDAG-GTALAQVL-DVTDRH-SVAAFAQAAVDTW-GRIDVLVNNAGV 91 (264)
T ss_dssp HHHHHHHHHTTCEEEEEESS--HHHHHHHHHHHHHTT-CEEEEEEC-CTTCHH-HHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcC-CcEEEEEc-CCCCHH-HHHHHHHHHHHHc-CCCCEEEECCCC
Confidence 34566777889999999864 333344444554433 33322222 222332 4455666777777 579999999985
Q ss_pred h
Q 025563 194 G 194 (251)
Q Consensus 194 G 194 (251)
.
T Consensus 92 ~ 92 (264)
T 3tfo_A 92 M 92 (264)
T ss_dssp C
T ss_pred C
Confidence 4
No 480
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=40.06 E-value=92 Score=25.06 Aligned_cols=55 Identities=20% Similarity=0.144 Sum_probs=35.5
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC-cHHHHHHHHHc--CCEEEEeC
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA-SMERRIVLRAL--GAEVYLAD 131 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~~~~~--Ga~v~~v~ 131 (251)
+++.+|+..+|--|+++|..-.+.|.+++++..... .....+.++.. +.++..+.
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~ 67 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEe
Confidence 355678888889999999999999998777653321 12233344443 45665553
No 481
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=39.98 E-value=44 Score=30.22 Aligned_cols=51 Identities=10% Similarity=-0.001 Sum_probs=37.6
Q ss_pred hHHHHHHHHHHHHc-CCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEec
Q 025563 58 DRIALSMIKDAEEK-GLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 58 ~R~a~~~l~~a~~~-g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp 109 (251)
-|+..+.+..+.+. |.--.|.+ |+..+.||-|..+|.....+|.+++.+.+
T Consensus 219 g~Gv~~~~~~~~~~~g~~l~g~~-VaVQG~GnVG~~aa~~L~e~GakvVavsD 270 (456)
T 3r3j_A 219 GYGVVYFAENVLKDLNDNLENKK-CLVSGSGNVAQYLVEKLIEKGAIVLTMSD 270 (456)
T ss_dssp HHHHHHHHHHHHHTTTCCSTTCC-EEEECCSHHHHHHHHHHHHHTCCBCCEEC
T ss_pred chHHHHHHHHHHHHcCCCccCCE-EEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 45777777776654 33223454 88888999999999999999998875553
No 482
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=39.97 E-value=1.4e+02 Score=24.12 Aligned_cols=86 Identities=15% Similarity=0.197 Sum_probs=49.3
Q ss_pred cEEEEecCC--CcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhh
Q 025563 103 KLIIVMPSI--ASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDS 180 (251)
Q Consensus 103 ~~~ivvp~~--~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~ 180 (251)
+.+++.-.. .=....+.+...|++|+.++.. .+...+.+.++.+......++ +. +....+ ....+..++.++.
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~-~~-Dl~d~~-~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARH--SDALQVVADEIAGVGGKALPI-RC-DVTQPD-QVRGMLDQMTGEL 107 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESS--GGGGHHHHHHHHHTTCCCEEE-EC-CTTCHH-HHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCeEEEE-Ec-CCCCHH-HHHHHHHHHHHHc
Confidence 455554332 2245567777789999999874 233333444444433223332 22 222332 4456667777777
Q ss_pred CCCCCEEEEecCch
Q 025563 181 GGDVDILVAGIGTG 194 (251)
Q Consensus 181 ~~~~d~vv~~vGtG 194 (251)
+.+|.+|..+|..
T Consensus 108 -g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 108 -GGIDIAVCNAGIV 120 (276)
T ss_dssp -SCCSEEEECCCCC
T ss_pred -CCCCEEEECCCCC
Confidence 5799999999854
No 483
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=39.97 E-value=1.5e+02 Score=23.99 Aligned_cols=88 Identities=16% Similarity=0.211 Sum_probs=48.8
Q ss_pred cEEEEecCC--CcHHHHHHHHHcCCEEEEeCCCC--------------ChHHHHHHHHHHhhcCCCeEecCCCCCCchHH
Q 025563 103 KLIIVMPSI--ASMERRIVLRALGAEVYLADQAG--------------GFEGILRKGEEILSNTPNGFMFRQFENPANPK 166 (251)
Q Consensus 103 ~~~ivvp~~--~~~~~~~~~~~~Ga~v~~v~~~~--------------~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~ 166 (251)
+.+++.-.. .-....+.+...|++|+.++... +.+...+.+.++.+.. ......+. +....+
T Consensus 12 k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-Dv~~~~ 89 (286)
T 3uve_A 12 KVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-RRIVTAEV-DVRDYD 89 (286)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-CCEEEEEC-CTTCHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-CceEEEEc-CCCCHH
Confidence 455554332 22456677778899999986531 1222333333443333 33322232 222332
Q ss_pred HHHhhHHHHHhhhhCCCCCEEEEecCch
Q 025563 167 IHYETTGPEIWKDSGGDVDILVAGIGTG 194 (251)
Q Consensus 167 ~g~~t~~~EI~~q~~~~~d~vv~~vGtG 194 (251)
....+..++.++. +.+|.+|..+|.+
T Consensus 90 -~v~~~~~~~~~~~-g~id~lv~nAg~~ 115 (286)
T 3uve_A 90 -ALKAAVDSGVEQL-GRLDIIVANAGIG 115 (286)
T ss_dssp -HHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred -HHHHHHHHHHHHh-CCCCEEEECCccc
Confidence 4556677777777 5799999999853
No 484
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=39.89 E-value=38 Score=25.32 Aligned_cols=30 Identities=27% Similarity=0.491 Sum_probs=27.0
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPS 110 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~ 110 (251)
++.-++|..|..+|...++.|.+++++-..
T Consensus 4 vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 4 VIVVGGGPSGLSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred EEEECCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 788889999999999999999999998754
No 485
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=39.85 E-value=1.2e+02 Score=26.31 Aligned_cols=52 Identities=21% Similarity=0.201 Sum_probs=38.1
Q ss_pred CCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCC------cH----HHHHHHHHcCCEEEE
Q 025563 77 GKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIA------SM----ERRIVLRALGAEVYL 129 (251)
Q Consensus 77 g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~------~~----~~~~~~~~~Ga~v~~ 129 (251)
++. ++.-++|+.|.-+|...+++|.+++++.+... ++ ...+.++..|.+++.
T Consensus 145 ~~~-vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~ 206 (408)
T 2gqw_A 145 QSR-LLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRF 206 (408)
T ss_dssp TCE-EEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCe-EEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEe
Confidence 344 77788999999999999999999999875431 12 224456777777654
No 486
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=39.73 E-value=1.1e+02 Score=26.08 Aligned_cols=81 Identities=19% Similarity=0.130 Sum_probs=43.3
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCC--ChHHHHHHHHHHhhcCCCeEecCC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAG--GFEGILRKGEEILSNTPNGFMFRQ 158 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~--~~~~~~~~a~~~~~~~~~~~~~~~ 158 (251)
++..++|..+..++..+- .+-.-.|+++...-......++..|++++.++... ++.-..+..++..+.....+++..
T Consensus 102 v~~t~g~~~a~~~~~~~~-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~ 180 (412)
T 2x5d_A 102 AIVTIGSKEGLAHLMLAT-LDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGF 180 (412)
T ss_dssp EEEESCHHHHHHHHHHHH-CCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEES
T ss_pred EEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECC
Confidence 666777777776665543 22212344444444556666778999999887542 232122333333333345666643
Q ss_pred CCCC
Q 025563 159 FENP 162 (251)
Q Consensus 159 ~~n~ 162 (251)
..||
T Consensus 181 p~np 184 (412)
T 2x5d_A 181 PSNP 184 (412)
T ss_dssp SCTT
T ss_pred CCCC
Confidence 3444
No 487
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=39.56 E-value=1.4e+02 Score=23.64 Aligned_cols=36 Identities=17% Similarity=0.278 Sum_probs=26.6
Q ss_pred CCCCEEEEecCchhHHHHHHHHHHhhC----CCcEEEEEeCC
Q 025563 182 GDVDILVAGIGTGGTVTGSGRFLKEKN----PNIKVYGVEPT 219 (251)
Q Consensus 182 ~~~d~vv~~vGtGg~~~Gi~~~~~~~~----~~~~vigVep~ 219 (251)
++||+|||. +...+.|+..++++.+ .++.|+|.+-.
T Consensus 176 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~~ 215 (277)
T 3cs3_A 176 TEPVDVFAF--NDEMAIGVYKYVAETNYQMGKDIRIIGFDNS 215 (277)
T ss_dssp CSSEEEEES--SHHHHHHHHHHHTTSSCCBTTTEEEECSSCC
T ss_pred CCCcEEEEc--ChHHHHHHHHHHHHcCCCCCCcEEEEEeCCc
Confidence 468898874 5667789999999875 24778887654
No 488
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=39.47 E-value=56 Score=27.19 Aligned_cols=61 Identities=10% Similarity=-0.003 Sum_probs=37.2
Q ss_pred HHHHHHHHCCCcEEEEecC--CCcHHHHHHHHHcCCEEE-EeCCCCChHHHHHHHHHHhhcCCCeEec
Q 025563 92 GLAFIAALRGYKLIIVMPS--IASMERRIVLRALGAEVY-LADQAGGFEGILRKGEEILSNTPNGFMF 156 (251)
Q Consensus 92 alA~~a~~~G~~~~ivvp~--~~~~~~~~~~~~~Ga~v~-~v~~~~~~~~~~~~a~~~~~~~~~~~~~ 156 (251)
..+..|+..|+..+++.+- .....-++.++.+|.+++ .+.+..+ .++ .+++++...+..|+
T Consensus 114 ~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~-~er---i~~i~~~~~gfvY~ 177 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNAD-ADT---LKMVSEQGEGYTYL 177 (267)
T ss_dssp HHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCC-HHH---HHHHHHHCCSCEEE
T ss_pred HHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCC-HHH---HHHHHHhCCCcEEE
Confidence 3566677789998888532 334567788899998865 4544322 333 44444444456665
No 489
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=39.43 E-value=47 Score=27.64 Aligned_cols=81 Identities=19% Similarity=0.118 Sum_probs=40.7
Q ss_pred EEEeccChHHHHHHHHHH-----HCCCcEEEEecCCCcHHH---HHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCC
Q 025563 81 LIETTGGNTGIGLAFIAA-----LRGYKLIIVMPSIASMER---RIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPN 152 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~-----~~G~~~~ivvp~~~~~~~---~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~ 152 (251)
++..++|..+..++..+- .-|= .|+++....... ...++..|++++.++...+..-..+..++..++...
T Consensus 63 i~~~~g~~~a~~~~~~~~~~~~~~~gd--~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~ 140 (382)
T 4hvk_A 63 VVFTSGATEANNLAIIGYAMRNARKGK--HILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTI 140 (382)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHGGGCC--EEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCTTEE
T ss_pred EEEECCchHHHHHHHHHhhhhhcCCCC--EEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhccCce
Confidence 666777766666665543 3333 444554433333 334556799999987532211012222333333334
Q ss_pred eEecCCCCCCc
Q 025563 153 GFMFRQFENPA 163 (251)
Q Consensus 153 ~~~~~~~~n~~ 163 (251)
.+++....||.
T Consensus 141 ~v~~~~~~npt 151 (382)
T 4hvk_A 141 LVSVQHANNEI 151 (382)
T ss_dssp EEECCSBCTTT
T ss_pred EEEEECCCCCc
Confidence 56665544543
No 490
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=39.42 E-value=1.4e+02 Score=23.59 Aligned_cols=90 Identities=13% Similarity=0.068 Sum_probs=50.1
Q ss_pred CEEEEeCCCCCh---HHHHHHHHHHhhcCCCeEecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHHHHH
Q 025563 125 AEVYLADQAGGF---EGILRKGEEILSNTPNGFMFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVTGSG 201 (251)
Q Consensus 125 a~v~~v~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~Gi~ 201 (251)
-+|..+.+..+. .++.+-.++..++. +.-+..........+.+|.. ..+++++ .+.||+|||. +...+.|+.
T Consensus 124 ~~I~~i~g~~~~~~~~~R~~Gf~~al~~~-g~~~~~~~~~~~~~~~~~~~-~~~ll~~-~~~~~ai~~~--nD~~A~g~~ 198 (271)
T 2dri_A 124 AKVIELQGIAGTSAARERGEGFQQAVAAH-KFNVLASQPADFDRIKGLNV-MQNLLTA-HPDVQAVFAQ--NDEMALGAL 198 (271)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHH-TCEEEEEEECTTCHHHHHHH-HHHHHHH-CTTCCEEEES--SHHHHHHHH
T ss_pred CeEEEEECCCCCccHhHHHHHHHHHHhcC-CCEEEEecCCCCCHHHHHHH-HHHHHHh-CCCccEEEEC--CCcHHHHHH
Confidence 478777543222 23333334444443 32211111111233335443 3455554 3568998876 456678999
Q ss_pred HHHHhhC-CCcEEEEEeCC
Q 025563 202 RFLKEKN-PNIKVYGVEPT 219 (251)
Q Consensus 202 ~~~~~~~-~~~~vigVep~ 219 (251)
.++++.+ .++.|+|.+-.
T Consensus 199 ~al~~~g~~dv~vvGfD~~ 217 (271)
T 2dri_A 199 RALQTAGKSDVMVVGFDGT 217 (271)
T ss_dssp HHHHHHTCCSCEEEEEECC
T ss_pred HHHHHcCCCCcEEEEecCC
Confidence 9999876 47999999865
No 491
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=39.39 E-value=2e+02 Score=25.25 Aligned_cols=108 Identities=12% Similarity=0.031 Sum_probs=66.6
Q ss_pred CCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeEe
Q 025563 76 PGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGFM 155 (251)
Q Consensus 76 ~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~ 155 (251)
.|++ +..-+.|+-|.++|..++.+|++++++-+..... ...+.+|++. +. +.+ ++.++. +.+.
T Consensus 190 ~gkt-vGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~---~~~~~~G~~~--~~---~l~-------ell~~a-DvV~ 252 (393)
T 2nac_A 190 EAMH-VGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPE---SVEKELNLTW--HA---TRE-------DMYPVC-DVVT 252 (393)
T ss_dssp TTCE-EEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCH---HHHHHHTCEE--CS---SHH-------HHGGGC-SEEE
T ss_pred CCCE-EEEEeECHHHHHHHHHHHhCCCEEEEEcCCccch---hhHhhcCcee--cC---CHH-------HHHhcC-CEEE
Confidence 3454 7778889999999999999999977665443332 2344567653 11 222 344444 5555
Q ss_pred cCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhHHH--HHHHHHHh
Q 025563 156 FRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGTVT--GSGRFLKE 206 (251)
Q Consensus 156 ~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~~~--Gi~~~~~~ 206 (251)
+.--.++... .-+..+.++.+ +++.+++-+|.|+..- .+..++++
T Consensus 253 l~~Plt~~t~----~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~ 299 (393)
T 2nac_A 253 LNCPLHPETE----HMINDETLKLF--KRGAYIVNTARGKLCDRDAVARALES 299 (393)
T ss_dssp ECSCCCTTTT----TCBSHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred EecCCchHHH----HHhhHHHHhhC--CCCCEEEECCCchHhhHHHHHHHHHc
Confidence 5432222221 12234566666 3689999999998654 57777765
No 492
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=39.33 E-value=1.6e+02 Score=24.71 Aligned_cols=51 Identities=18% Similarity=0.118 Sum_probs=30.6
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEEEEeCC
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEVYLADQ 132 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~ 132 (251)
++..++|..+..++..+- .+-.-.|+++...-..-...++..|++++.++.
T Consensus 105 i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~ 155 (407)
T 3nra_A 105 LIITPGTQGALFLAVAAT-VARGDKVAIVQPDYFANRKLVEFFEGEMVPVQL 155 (407)
T ss_dssp EEEESHHHHHHHHHHHTT-CCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEB
T ss_pred EEEeCCcHHHHHHHHHHh-CCCCCEEEEcCCcccchHHHHHHcCCEEEEeec
Confidence 666666666666555432 222223444443334566778889999988864
No 493
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=39.32 E-value=1.8e+02 Score=24.67 Aligned_cols=56 Identities=21% Similarity=0.278 Sum_probs=32.1
Q ss_pred CCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCC
Q 025563 53 CCSVKDRIALSMIKDAEEKGLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSI 111 (251)
Q Consensus 53 tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~ 111 (251)
.|-+-|-. .++....+.+.-..+++ ++..++|-.|++++.+.+..|.+-+.++.++
T Consensus 132 ~G~NTD~~--Gf~~~L~~~~~~l~gk~-~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 132 TGHITDGT--GYMRALKEAGHDIIGKK-MTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp EEECCHHH--HHHHHHHHTTCCCTTSE-EEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred EEeCCCHH--HHHHHHHHcCCCccCCE-EEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 45555532 22222233443334555 5555568899999999999999444444333
No 494
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=39.30 E-value=1.2e+02 Score=27.60 Aligned_cols=52 Identities=19% Similarity=0.222 Sum_probs=36.1
Q ss_pred CCCCCCCeEEEEeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEE
Q 025563 72 GLITPGKSVLIETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEV 127 (251)
Q Consensus 72 g~~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v 127 (251)
+..-.|++ ++..+.|.-|+++|...+.+|.+++++ +..+.+.......|+++
T Consensus 260 g~~L~GKt-VvVtGaGgIG~aiA~~Laa~GA~Viv~---D~~~~~a~~Aa~~g~dv 311 (488)
T 3ond_A 260 DVMIAGKV-AVVAGYGDVGKGCAAALKQAGARVIVT---EIDPICALQATMEGLQV 311 (488)
T ss_dssp CCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHTTCEE
T ss_pred CCcccCCE-EEEECCCHHHHHHHHHHHHCCCEEEEE---cCCHHHHHHHHHhCCcc
Confidence 43335666 666677899999999999999976554 33455666666677654
No 495
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=39.15 E-value=1.9e+02 Score=24.95 Aligned_cols=108 Identities=11% Similarity=0.099 Sum_probs=64.9
Q ss_pred CCCeEEEEeccChHHHHHHHHHHHCCCc-EEEEecCCCcHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHhhcCCCeE
Q 025563 76 PGKSVLIETTGGNTGIGLAFIAALRGYK-LIIVMPSIASMERRIVLRALGAEVYLADQAGGFEGILRKGEEILSNTPNGF 154 (251)
Q Consensus 76 ~g~~~vv~~ssGN~g~alA~~a~~~G~~-~~ivvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~ 154 (251)
.|++ +..-+.|+-|.++|..++.+|++ ++++-+...+.. ..+.+|++. +. +.++ +.++. +.+
T Consensus 163 ~g~t-vgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~---~~~~~g~~~--~~---~l~e-------ll~~a-DvV 225 (364)
T 2j6i_A 163 EGKT-IATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKD---AEEKVGARR--VE---NIEE-------LVAQA-DIV 225 (364)
T ss_dssp TTCE-EEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHH---HHHHTTEEE--CS---SHHH-------HHHTC-SEE
T ss_pred CCCE-EEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchh---HHHhcCcEe--cC---CHHH-------HHhcC-CEE
Confidence 3454 77778899999999999999997 766644333332 344567542 22 2322 33333 555
Q ss_pred ecCCCCCCchHHHHHhhHHHHHhhhhCCCCCEEEEecCchhH--HHHHHHHHHh
Q 025563 155 MFRQFENPANPKIHYETTGPEIWKDSGGDVDILVAGIGTGGT--VTGSGRFLKE 206 (251)
Q Consensus 155 ~~~~~~n~~~~~~g~~t~~~EI~~q~~~~~d~vv~~vGtGg~--~~Gi~~~~~~ 206 (251)
.+.--.++... ..+..+.+.++ +++.+++-+|.|+. -..+..++++
T Consensus 226 ~l~~P~t~~t~----~li~~~~l~~m--k~ga~lIn~arG~~vd~~aL~~aL~~ 273 (364)
T 2j6i_A 226 TVNAPLHAGTK----GLINKELLSKF--KKGAWLVNTARGAICVAEDVAAALES 273 (364)
T ss_dssp EECCCCSTTTT----TCBCHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred EECCCCChHHH----HHhCHHHHhhC--CCCCEEEECCCCchhCHHHHHHHHHc
Confidence 54422222211 12334666666 36899999999975 3456677765
No 496
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A*
Probab=39.11 E-value=13 Score=26.95 Aligned_cols=63 Identities=14% Similarity=0.142 Sum_probs=44.8
Q ss_pred EeccChHHHHHHHHHHHCCCcEEEEecCCCcHHHHHHHHHcCCEE--EEeCCCCChHHHHHHHHHHhhcC
Q 025563 83 ETTGGNTGIGLAFIAALRGYKLIIVMPSIASMERRIVLRALGAEV--YLADQAGGFEGILRKGEEILSNT 150 (251)
Q Consensus 83 ~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v--~~v~~~~~~~~~~~~a~~~~~~~ 150 (251)
.+++.++-..++..++..|.++++. +..+...+.+...|... +.+-. +.+++.+.+++.+++.
T Consensus 57 Ds~g~~~L~~~~~~~~l~G~~~~l~---Gi~p~va~~l~~~G~~l~~i~~~~--~l~~Al~~l~~~~~~~ 121 (123)
T 3zxn_A 57 DEFVTRVLIEISRLAELLGLPFVLT---GIKPAVAITLTEMGLDLRGMATAL--NLQKGLDKLKNLARME 121 (123)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCEEEE---CCCHHHHHHHHHTTCCSTTSEEES--SHHHHHHHHHHHHTC-
T ss_pred cHHHHHHHHHHHHHHHHCCCEEEEE---cCCHHHHHHHHHhCCCccceEEEC--CHHHHHHHHHHhhhhh
Confidence 4445677788888899999998776 56778888888888752 22222 5788888887776653
No 497
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=39.10 E-value=32 Score=28.52 Aligned_cols=28 Identities=14% Similarity=0.139 Sum_probs=25.5
Q ss_pred EEEeccChHHHHHHHHHHHCCCcEEEEe
Q 025563 81 LIETTGGNTGIGLAFIAALRGYKLIIVM 108 (251)
Q Consensus 81 vv~~ssGN~g~alA~~a~~~G~~~~ivv 108 (251)
|+.-++|-.|.++|+..++.|++++++=
T Consensus 5 V~IIGaG~~Gl~~A~~L~~~G~~V~vlE 32 (336)
T 1yvv_A 5 IAIIGTGIAGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECCcHHHHHHHHHHHHCCCcEEEEE
Confidence 7888899999999999999999988874
No 498
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=39.06 E-value=31 Score=29.60 Aligned_cols=29 Identities=24% Similarity=0.495 Sum_probs=25.7
Q ss_pred EEEEeccChHHHHHHHHHHHCCCcEEEEe
Q 025563 80 VLIETTGGNTGIGLAFIAALRGYKLIIVM 108 (251)
Q Consensus 80 ~vv~~ssGN~g~alA~~a~~~G~~~~ivv 108 (251)
.|+.-++|-.|.++|+..++.|++++++=
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G~~V~vlE 34 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERGHRVLVLE 34 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence 37888899999999999999999988774
No 499
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=39.00 E-value=1.9e+02 Score=25.02 Aligned_cols=78 Identities=9% Similarity=-0.032 Sum_probs=44.8
Q ss_pred CCCCchhhHHHHHHHHHHHHcCC--CCCCCeEEEEeccChHHHHHHHHHHHC--CCcEEEEecCCCcHHHHHHHHHcCCE
Q 025563 51 EPCCSVKDRIALSMIKDAEEKGL--ITPGKSVLIETTGGNTGIGLAFIAALR--GYKLIIVMPSIASMERRIVLRALGAE 126 (251)
Q Consensus 51 ~ptGS~K~R~a~~~l~~a~~~g~--~~~g~~~vv~~ssGN~g~alA~~a~~~--G~~~~ivvp~~~~~~~~~~~~~~Ga~ 126 (251)
.+.|.-..|-+..-.. ...+. ..++...++...+|+.+..++..+-.. . .. |+++.-.-..-...++..|++
T Consensus 70 ~~~G~~~lr~aia~~~--~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~-Vlv~~P~y~~~~~~~~~~g~~ 145 (405)
T 3k7y_A 70 LGNGTEDFSTLTQNLI--FGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ET-LYVTNPPYINHVNMIESRGFN 145 (405)
T ss_dssp TTSSCHHHHHHHHHHH--HCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CE-EEEESSCCHHHHHHHHTTTCE
T ss_pred CCCCcHHHHHHHHHHH--cCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CE-EEEeCCCCHhHHHHHHHcCCe
Confidence 3467766775433222 22221 122222256667777777777655443 5 44 445554445566778899999
Q ss_pred EEEeCC
Q 025563 127 VYLADQ 132 (251)
Q Consensus 127 v~~v~~ 132 (251)
++.++-
T Consensus 146 ~~~v~~ 151 (405)
T 3k7y_A 146 LKYINF 151 (405)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 999864
No 500
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=38.93 E-value=43 Score=25.92 Aligned_cols=37 Identities=14% Similarity=-0.023 Sum_probs=30.0
Q ss_pred CCCCCCeEEEEeccChHH--HHHHHHHHHCCCcEEEEec
Q 025563 73 LITPGKSVLIETTGGNTG--IGLAFIAALRGYKLIIVMP 109 (251)
Q Consensus 73 ~~~~g~~~vv~~ssGN~g--~alA~~a~~~G~~~~ivvp 109 (251)
.+++++..++.+.+|+.. ..+|..++..|.+++.+.+
T Consensus 74 ~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 74 TLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 577788877777777765 6667778999999999998
Done!