BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>025564
MIAKCSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLAT
TGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRS
CIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEI
CASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKVVQLLCSLSSS
VIILFLIFLDF

High Scoring Gene Products

Symbol, full name Information P value
AT5G10460 protein from Arabidopsis thaliana 3.3e-86
SPO_3151
HAD-superfamily subfamily IIA hydrolase, TIGR01459
protein from Ruegeria pomeroyi DSS-3 7.7e-13
PDXP
Pyridoxal phosphate phosphatase
protein from Bos taurus 0.00097
PDXP
Pyridoxal phosphate phosphatase
protein from Bos taurus 0.00097
PDXP
Uncharacterized protein
protein from Canis lupus familiaris 0.00097

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025564
        (251 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2142454 - symbol:AT5G10460 "AT5G10460" species...   862  3.3e-86   1
TIGR_CMR|SPO_3151 - symbol:SPO_3151 "HAD-superfamily subf...   173  7.7e-13   1
UNIPROTKB|F1MW60 - symbol:PDXP "Pyridoxal phosphate phosp...   108  0.00097   1
UNIPROTKB|Q3ZBF9 - symbol:PDXP "Pyridoxal phosphate phosp...   108  0.00097   1
UNIPROTKB|J9NUR4 - symbol:PDXP "Uncharacterized protein" ...   108  0.00097   1


>TAIR|locus:2142454 [details] [associations]
            symbol:AT5G10460 "AT5G10460" species:3702 "Arabidopsis
            thaliana" [GO:0016787 "hydrolase activity" evidence=ISS]
            [GO:0009507 "chloroplast" evidence=IDA] InterPro:IPR006357
            Pfam:PF13344 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
            Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
            GO:GO:0016787 eggNOG:COG0647 TIGRFAMs:TIGR01460 EMBL:BT015033
            IPI:IPI00539262 RefSeq:NP_196608.2 UniGene:At.32374
            UniGene:At.32376 ProteinModelPortal:Q6DBI9 SMR:Q6DBI9 STRING:Q6DBI9
            PaxDb:Q6DBI9 PRIDE:Q6DBI9 EnsemblPlants:AT5G10460.1 GeneID:830910
            KEGG:ath:AT5G10460 OMA:HDIKGAN ProtClustDB:CLSN2681040
            Genevestigator:Q6DBI9 InterPro:IPR006356 TIGRFAMs:TIGR01459
            Uniprot:Q6DBI9
        Length = 306

 Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
 Identities = 163/216 (75%), Positives = 186/216 (86%)

Query:    14 LFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR 73
             L Q +NGL+ I ETR FKAWLLDQ+GVLHDGKKPYPGAISTL+ LAT GAK+V+ISNSSR
Sbjct:     7 LSQPMNGLKDIVETRNFKAWLLDQYGVLHDGKKPYPGAISTLKNLATAGAKIVIISNSSR 66

Query:    74 RASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAIS 133
             RASTT++KLK LGFDPS F GAITSGELTHQ L RRDD WFAALGR CIH+TW+DRGAIS
Sbjct:    67 RASTTMEKLKGLGFDPSFFTGAITSGELTHQSLQRRDDPWFAALGRRCIHITWNDRGAIS 126

Query:   134 LEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANP 193
             LEGL L VVENVEEADF+LAHGTE +GLPSG V P ++ +LEKILE  A++ +PM+VANP
Sbjct:   127 LEGLDLNVVENVEEADFVLAHGTEALGLPSGSVSPRTIDELEKILEKSAARGLPMIVANP 186

Query:   194 DYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDK 229
             DYVTVEA    +MPGTLASK+E+LGGEV+ MGKP K
Sbjct:   187 DYVTVEANVFHIMPGTLASKYEELGGEVKSMGKPHK 222


>TIGR_CMR|SPO_3151 [details] [associations]
            symbol:SPO_3151 "HAD-superfamily subfamily IIA hydrolase,
            TIGR01459" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152
            "metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
            evidence=ISS] InterPro:IPR006357 Pfam:PF13344 EMBL:CP000031
            GenomeReviews:CP000031_GR Gene3D:3.40.50.1000 InterPro:IPR023214
            SUPFAM:SSF56784 GO:GO:0016787 RefSeq:YP_168354.1
            ProteinModelPortal:Q5LNQ2 DNASU:3194029 GeneID:3194029
            KEGG:sil:SPO3151 PATRIC:23379747 HOGENOM:HOG000145430 OMA:DVWGVLH
            ProtClustDB:CLSK934070 Uniprot:Q5LNQ2
        Length = 310

 Score = 173 (66.0 bits), Expect = 7.7e-13, P = 7.7e-13
 Identities = 57/226 (25%), Positives = 101/226 (44%)

Query:     3 AKCSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG 62
             A  +V   DP + Q +  L  I+E  R++A  +D +G +H+G   YP A++ L+     G
Sbjct:     9 ALATVSKPDPDMTQIITALAEISE--RYRALFVDLWGCVHNGVTAYPEAVAALQAYRAAG 66

Query:    63 AKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCI 122
               +V+++NS +  +    +L         +    TSG+     + R       A+G+   
Sbjct:    67 GIVVLVTNSPKPRAGVATQLSQFKVPQDAYDTIATSGDSARSAMFR------GAVGQKVY 120

Query:   123 HMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICA 182
              M   +R A   E L  K++++  E   +     EG+ +  G   PM+   + +   + A
Sbjct:   121 FMGEWERDAGFFEPL--KLLDSPVEITRVPLQEAEGI-VCCGPFDPMADPAVNRPDFLYA 177

Query:   183 SKK-IPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKP 227
               K + ++ ANPD V           G LA  + ++GGE  + GKP
Sbjct:   178 KTKGMKLLCANPDIVVDRGEIREWCAGALARLYTEMGGESLYFGKP 223


>UNIPROTKB|F1MW60 [details] [associations]
            symbol:PDXP "Pyridoxal phosphate phosphatase" species:9913
            "Bos taurus" [GO:0071318 "cellular response to ATP" evidence=IEA]
            [GO:0070938 "contractile ring" evidence=IEA] [GO:0032587 "ruffle
            membrane" evidence=IEA] [GO:0032465 "regulation of cytokinesis"
            evidence=IEA] [GO:0032154 "cleavage furrow" evidence=IEA]
            [GO:0031247 "actin rod assembly" evidence=IEA] [GO:0031072 "heat
            shock protein binding" evidence=IEA] [GO:0030836 "positive
            regulation of actin filament depolymerization" evidence=IEA]
            [GO:0030496 "midbody" evidence=IEA] [GO:0030027 "lamellipodium"
            evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
            [GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0006470
            "protein dephosphorylation" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0004721 "phosphoprotein phosphatase activity"
            evidence=IEA] InterPro:IPR006349 InterPro:IPR006357 Pfam:PF13344
            GO:GO:0005829 GO:GO:0007088 GO:GO:0006470 GO:GO:0015629
            Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
            GO:GO:0030027 GO:GO:0004721 GO:GO:0032587 GO:GO:0030496
            GO:GO:0032154 GO:GO:0032465 TIGRFAMs:TIGR01460 GO:GO:0070938
            GO:GO:0030836 GO:GO:0031247 GO:GO:0071318 Gene3D:3.40.50.10410
            InterPro:IPR023215 GeneTree:ENSGT00510000047020 TIGRFAMs:TIGR01452
            IPI:IPI00713190 UniGene:Bt.45290 OMA:WNGERAV EMBL:DAAA02014631
            ProteinModelPortal:F1MW60 Ensembl:ENSBTAT00000016505 Uniprot:F1MW60
        Length = 296

 Score = 108 (43.1 bits), Expect = 0.00097, P = 0.00097
 Identities = 32/88 (36%), Positives = 44/88 (50%)

Query:    29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
             R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct:    18 RAQGVLFDCDGVLWNGERAVPGAPELLERLAQAGKATLFVSNNSRRARPELALRFARLGF 77

Query:    88 ----DPSLFAGAITSGELTHQYLLRRDD 111
                    LF+ A+ +  L  Q LL   D
Sbjct:    78 GGLRSEQLFSSALCAARLLRQRLLGPPD 105


>UNIPROTKB|Q3ZBF9 [details] [associations]
            symbol:PDXP "Pyridoxal phosphate phosphatase" species:9913
            "Bos taurus" [GO:0007088 "regulation of mitosis" evidence=ISS]
            [GO:0005886 "plasma membrane" evidence=ISS] [GO:0015629 "actin
            cytoskeleton" evidence=ISS] [GO:0030027 "lamellipodium"
            evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0032154
            "cleavage furrow" evidence=ISS] [GO:0032587 "ruffle membrane"
            evidence=ISS] [GO:0070938 "contractile ring" evidence=ISS]
            [GO:0032465 "regulation of cytokinesis" evidence=ISS] [GO:0030836
            "positive regulation of actin filament depolymerization"
            evidence=ISS] [GO:0006470 "protein dephosphorylation" evidence=IDA]
            [GO:0004721 "phosphoprotein phosphatase activity" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0031258 "lamellipodium
            membrane" evidence=IEA] [GO:0033883 "pyridoxal phosphatase
            activity" evidence=IEA] [GO:0004647 "phosphoserine phosphatase
            activity" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR006349 InterPro:IPR006357 Pfam:PF13344
            GO:GO:0005829 GO:GO:0007088 GO:GO:0006470 GO:GO:0005856
            GO:GO:0046872 Gene3D:3.40.50.1000 InterPro:IPR023214
            SUPFAM:SSF56784 GO:GO:0004721 GO:GO:0032587 GO:GO:0031258
            GO:GO:0032465 eggNOG:COG0647 TIGRFAMs:TIGR01460 GO:GO:0030836
            GO:GO:0004647 Gene3D:3.40.50.10410 InterPro:IPR023215 HSSP:O59622
            HOGENOM:HOG000068104 HOVERGEN:HBG049429 TIGRFAMs:TIGR01452
            GO:GO:0033883 EMBL:BC103329 IPI:IPI00713190 RefSeq:NP_001030207.1
            UniGene:Bt.45290 ProteinModelPortal:Q3ZBF9 SMR:Q3ZBF9 STRING:Q3ZBF9
            PRIDE:Q3ZBF9 GeneID:506308 KEGG:bta:506308 CTD:57026
            InParanoid:Q3ZBF9 KO:K07758 OrthoDB:EOG44F69M NextBio:20867551
            Uniprot:Q3ZBF9
        Length = 296

 Score = 108 (43.1 bits), Expect = 0.00097, P = 0.00097
 Identities = 32/88 (36%), Positives = 44/88 (50%)

Query:    29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
             R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct:    18 RAQGVLFDCNGVLWNGERAVPGAPELLERLAQAGKATLFVSNNSRRARPELALRFARLGF 77

Query:    88 ----DPSLFAGAITSGELTHQYLLRRDD 111
                    LF+ A+ +  L  Q LL   D
Sbjct:    78 GGLRSEQLFSSALCAARLLRQRLLGPPD 105


>UNIPROTKB|J9NUR4 [details] [associations]
            symbol:PDXP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0016791 "phosphatase activity" evidence=IEA]
            InterPro:IPR006349 InterPro:IPR006357 Pfam:PF13344
            Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
            GO:GO:0016311 GO:GO:0016791 TIGRFAMs:TIGR01460 Gene3D:3.40.50.10410
            InterPro:IPR023215 GeneTree:ENSGT00510000047020 TIGRFAMs:TIGR01452
            CTD:57026 KO:K07758 OMA:WNGERAV EMBL:AAEX03007326
            RefSeq:XP_003431551.1 ProteinModelPortal:J9NUR4
            Ensembl:ENSCAFT00000043767 GeneID:100688635 KEGG:cfa:100688635
            Uniprot:J9NUR4
        Length = 296

 Score = 108 (43.1 bits), Expect = 0.00097, P = 0.00097
 Identities = 31/85 (36%), Positives = 44/85 (51%)

Query:    29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
             R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct:    18 RTQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 77

Query:    88 D----PSLFAGAITSGELTHQYLLR 108
                    +F+ A+ +  L  Q LLR
Sbjct:    78 GGLRAEQVFSSALCAARLLRQRLLR 102


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      251       229   0.00082  113 3  11 22  0.40    33
                                                     32  0.42    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  181 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.03u 0.08s 20.11t   Elapsed:  00:00:03
  Total cpu time:  20.03u 0.08s 20.11t   Elapsed:  00:00:03
  Start:  Fri May 10 15:16:53 2013   End:  Fri May 10 15:16:56 2013

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