BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025564
(251 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZBF9|PLPP_BOVIN Pyridoxal phosphate phosphatase OS=Bos taurus GN=PDXP PE=1 SV=1
Length = 296
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
R + L D GVL +G++ PGA LE LA G + +SN+SRRA + + LGF
Sbjct: 18 RAQGVLFDCNGVLWNGERAVPGAPELLERLAQAGKATLFVSNNSRRARPELALRFARLGF 77
Query: 88 ----DPSLFAGAITSGELTHQYLL 107
LF+ A+ + L Q LL
Sbjct: 78 GGLRSEQLFSSALCAARLLRQRLL 101
>sp|Q96GD0|PLPP_HUMAN Pyridoxal phosphate phosphatase OS=Homo sapiens GN=PDXP PE=1 SV=2
Length = 296
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
R + L D GVL +G++ PGA LE LA G + +SN+SRRA + + LGF
Sbjct: 18 RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 77
Query: 88 D----PSLFAGAITSGELTHQYLLRRDDA 112
LF+ A+ + L Q L DA
Sbjct: 78 GGLRAEQLFSSALCAARLLRQRLPGPPDA 106
>sp|Q00472|PNPP_SCHPO 4-nitrophenylphosphatase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pho2 PE=4 SV=2
Length = 298
Score = 44.3 bits (103), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLKSLGF 87
+F +L D GVL G KP PG T+++L + G +++ +SN+S ++ T ++K+ G
Sbjct: 17 KFDVFLFDCDGVLWSGSKPIPGVTDTMKLLRSLGKQIIFVSNNSTKSRETYMNKINEHGI 76
Query: 88 DPSL---FAGAITSGELTHQYLLRRDDAWFAALGRSCIH 123
L + A +S + L D LG + I
Sbjct: 77 AAKLEEIYPSAYSSATYVKKVLKLPADKKVFVLGEAGIE 115
>sp|Q8VD52|PLPP_RAT Pyridoxal phosphate phosphatase OS=Rattus norvegicus GN=Pdxp PE=1
SV=2
Length = 309
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 34 LLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGFD---- 88
L D GVL +G++ PGA L+ LA G + +SN+SRRA + + LGF
Sbjct: 23 LFDCDGVLWNGERIVPGAPELLQRLAQAGKATLFVSNNSRRARPELALRFARLGFTGLRA 82
Query: 89 PSLFAGAITSGELTHQYLLRRDDA 112
LF+ A+ + L Q L DA
Sbjct: 83 EELFSSAVCAARLLRQRLPGPPDA 106
>sp|P60487|PLPP_MOUSE Pyridoxal phosphate phosphatase OS=Mus musculus GN=Pdxp PE=1 SV=1
Length = 292
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 34 LLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF----D 88
L D GVL +G++ PGA L+ LA G + +SN+SRRA + + LGF
Sbjct: 23 LFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAGLRA 82
Query: 89 PSLFAGAITSGELTHQYL 106
LF+ A+ + L Q L
Sbjct: 83 EQLFSSALCAARLLRQRL 100
>sp|P34492|YMQ1_CAEEL Putative NipSnap protein K02D10.1 OS=Caenorhabditis elegans
GN=K02D10.1 PE=2 SV=4
Length = 526
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 81/214 (37%), Gaps = 15/214 (7%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVI--SNSSRRASTTIDKLKSLG 86
+ +L D GVL G P PGAI + +L +K V + +NS++ + K++ LG
Sbjct: 14 NYDTFLFDADGVLWTGDIPVPGAIEWINLLLEDPSKKVFVLTNNSTKTLEQYMKKIEKLG 73
Query: 87 FDPSLFAGAITSGELTHQYLLRRDDA----WFAALGRSCIHMTWSDRGAISLEGLGLKVV 142
F I+ + YL D + +G + T + G + G G +
Sbjct: 74 FGHLGRNNVISPAIVLADYLKSNADKFSGEYVYLIGTENLKATLENDGGVKCFGTGPDSI 133
Query: 143 ENVEEADFILAHGTEGMGLPSGDV----RPMSLQDLEKILEICASKKIPMVVANPDYVTV 198
+ + DFI H + P V S + K + +V N DY
Sbjct: 134 RDHTDGDFI--HKVDMSIAPKAVVCSYDAHFSYPKIMKASNYLQDPSVEYLVTNQDYTFP 191
Query: 199 EARALRVMPG---TLASKFEKLGGEVRWMGKPDK 229
V+PG T A+ G + + GKP K
Sbjct: 192 GPVPGVVIPGSGATSAAVTAVTGRDPKVFGKPHK 225
>sp|Q2T9S4|PGP_BOVIN Phosphoglycolate phosphatase OS=Bos taurus GN=PGP PE=2 SV=1
Length = 321
Score = 37.4 bits (85), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 18 LNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVIS-NSSRRAS 76
LN R A L D GVL G+ PGA TL L G ++ I+ NSS+
Sbjct: 16 LNAERAQALLADVDTLLFDCDGVLWRGETAVPGAPETLTALRARGKRLAFITNNSSKTRE 75
Query: 77 TTIDKLKSLGF 87
+KL+ LGF
Sbjct: 76 AYAEKLRCLGF 86
>sp|Q8CHP8|PGP_MOUSE Phosphoglycolate phosphatase OS=Mus musculus GN=Pgp PE=2 SV=1
Length = 321
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 34 LLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSLGF 87
L D GVL G+ PGA TL L G ++ I+N+S + T +KL+ LGF
Sbjct: 32 LFDCDGVLWRGETAVPGAPETLRALRARGKRLGFITNNSSKTRTAYAEKLRRLGF 86
>sp|Q3ZCH9|HDHD2_BOVIN Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Bos taurus GN=HDHD2 PE=2 SV=1
Length = 259
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L T + ++N+++ + +++L
Sbjct: 1 MATRRALKAVLVDLSGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKESKQDLLERL 60
Query: 83 KSLGFDPS---LFAGAITSGELTHQYLLR 108
K L FD S +F + L Q +R
Sbjct: 61 KKLEFDISEDEIFTSLTAARNLVEQKQVR 89
>sp|O32125|YUTF_BACSU Uncharacterized hydrolase YutF OS=Bacillus subtilis (strain 168)
GN=yutF PE=1 SV=1
Length = 256
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 15/128 (11%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAK-MVVISNSSRRASTTIDKLKSLG 86
+ +K +L+D G +++G + A + L G + V +NSSR DKL S
Sbjct: 2 KTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVS-- 59
Query: 87 FD-PSLFAGAITSGELTHQYLL-RRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVEN 144
FD P+ T+ T Q++ ++ DA +G I R AI GL
Sbjct: 60 FDIPATEEQVFTTSMATAQHIAQQKKDASVYVIGEEGI------RQAIEENGLTF----G 109
Query: 145 VEEADFIL 152
E ADF++
Sbjct: 110 GENADFVV 117
>sp|Q4L4U2|NAGD_STAHJ Protein NagD homolog OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=nagD PE=3 SV=1
Length = 263
Score = 35.4 bits (80), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 24/207 (11%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+ +K +L+D G ++ G GA ++ L + V +NS++ KLK +
Sbjct: 2 KNYKGYLIDLDGTMYLGTDEIDGAAQFIDYLNNHQIPHLYVTNNSTKTPEEVTQKLKEMN 61
Query: 87 FDPSLFAGAITSGELTHQYLL-RRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D +TS T Y+ + DA LG + + R A++ GL +K ENV
Sbjct: 62 IDAKP-EEVVTSALATANYISDEKSDATVYMLGGNGL------RTALTEAGLTVKDDENV 114
Query: 146 EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRV 205
D++ +GL ++ + L + + K + NPD + R
Sbjct: 115 ---DYV------AIGLDEN----VTYEKL-AVATLAVRKGARFISTNPDVSIPKERGFLP 160
Query: 206 MPGTLASKFEKLGGEV-RWMGKPDKVV 231
G + S G+ +++GKP+ V+
Sbjct: 161 GNGAITSVVSVSTGQAPQFIGKPEPVI 187
>sp|Q2YWR1|NAGD_STAAB Protein NagD homolog OS=Staphylococcus aureus (strain bovine RF122
/ ET3-1) GN=nagD PE=3 SV=1
Length = 259
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q7A1D4|NAGD_STAAW Protein NagD homolog OS=Staphylococcus aureus (strain MW2) GN=nagD
PE=3 SV=1
Length = 259
Score = 35.0 bits (79), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q6GAZ7|NAGD_STAAS Protein NagD homolog OS=Staphylococcus aureus (strain MSSA476)
GN=nagD PE=3 SV=1
Length = 259
Score = 35.0 bits (79), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q6GIF9|NAGD_STAAR Protein NagD homolog OS=Staphylococcus aureus (strain MRSA252)
GN=nagD PE=3 SV=1
Length = 259
Score = 35.0 bits (79), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q7A6K4|NAGD_STAAN Protein NagD homolog OS=Staphylococcus aureus (strain N315) GN=nagD
PE=3 SV=1
Length = 259
Score = 35.0 bits (79), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q99VE8|NAGD_STAAM Protein NagD homolog OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=nagD PE=1 SV=1
Length = 259
Score = 35.0 bits (79), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q5HHF6|NAGD_STAAC Protein NagD homolog OS=Staphylococcus aureus (strain COL) GN=nagD
PE=3 SV=1
Length = 259
Score = 35.0 bits (79), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q2FZX0|NAGD_STAA8 Protein NagD homolog OS=Staphylococcus aureus (strain NCTC 8325)
GN=nagD PE=3 SV=1
Length = 259
Score = 35.0 bits (79), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q2FIE5|NAGD_STAA3 Protein NagD homolog OS=Staphylococcus aureus (strain USA300)
GN=nagD PE=3 SV=1
Length = 259
Score = 35.0 bits (79), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
+++KA+L+D G ++ G GA ++ L G + V +NS++ +KL+ +
Sbjct: 2 KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61
Query: 87 FDPSLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
D + +TS T Y+ + A LG S ++ ++ G V++N
Sbjct: 62 ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111
Query: 146 EEADFIL 152
E D+++
Sbjct: 112 EHVDYVV 118
>sp|Q3UGR5|HDHD2_MOUSE Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Mus musculus GN=Hdhd2 PE=1 SV=2
Length = 259
Score = 35.0 bits (79), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L T + ++N+++ + +++L
Sbjct: 1 MAARRALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKESKKDLLERL 60
Query: 83 KSLGFDPS---LFAGAITSGELTHQYLLR 108
K L F+ S +F + L Q +R
Sbjct: 61 KKLEFEISEDEIFTSLTAARNLIEQKQVR 89
>sp|Q5R4B4|HDHD2_PONAB Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Pongo abelii GN=HDHD2 PE=2 SV=1
Length = 259
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L T + ++N+++ + +++L
Sbjct: 1 MAACRALKAVLVDLSGTLHIEDAAVPGAQEALKRLRGTSVIVRFVTNTTKESKQDLLERL 60
Query: 83 KSLGFDPS---LFAGAITSGELTHQYLLR 108
+ L FD S +F + L Q +R
Sbjct: 61 RKLEFDISEDEIFTSLTAARSLLEQKQVR 89
>sp|Q5BJJ5|HDHD2_DANRE Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Danio rerio GN=hdhd2 PE=2 SV=1
Length = 262
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSLG 86
R KA L+D G LH PGA L L + ++N+++ T+ ++L+ L
Sbjct: 5 RTLKAVLIDLSGTLHIEDTAVPGAQEALARLRQAPVAVKFVTNTTKECKRTLFERLRGLN 64
Query: 87 FD---PSLFAGAITSGELTHQYLLR 108
FD +F + L Q +R
Sbjct: 65 FDLQQQEIFTSLTAARNLVEQKAVR 89
>sp|O67359|GPH_AQUAE Phosphoglycolate phosphatase OS=Aquifex aeolicus (strain VF5)
GN=gph PE=1 SV=1
Length = 213
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%)
Query: 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE 100
KPYP TLE L + G K+ V+SN S I + +L L G T GE
Sbjct: 81 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGE 135
>sp|Q6AYR6|HDHD2_RAT Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Rattus norvegicus GN=Hdhd2 PE=2 SV=1
Length = 259
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L + ++N+++ + +++L
Sbjct: 1 MAARRVLKAVLVDLSGTLHIEDAAVPGAQEALKRLRAASVMVRFVTNTTKESKRDLLERL 60
Query: 83 KSLGFDPS---LFAGAITSGELTHQYLLR 108
+ L FD S +F + L Q +R
Sbjct: 61 RKLEFDISEEEIFTSLTAARNLIEQRQVR 89
>sp|Q688R1|MTP1_ORYSJ Metal tolerance protein 1 OS=Oryza sativa subsp. japonica GN=MTP1
PE=2 SV=1
Length = 418
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 196 VTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKVVQLLCSLSSSVIILF 245
+ V + L V+ ++ S +GG + W K++ L+C+L SVI+LF
Sbjct: 276 INVHSAYLHVLGDSIQSIGVMIGGAIIWYKPEWKIIDLICTLIFSVIVLF 325
>sp|Q9A5Z2|GPH_CAUCR Phosphoglycolate phosphatase OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=gph PE=3 SV=1
Length = 237
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 41 LHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI 79
+ D P+PG + L L T GAK+VV +N ST +
Sbjct: 91 IADESAPFPGVVEVLSDLKTAGAKLVVCTNKLTNLSTAL 129
>sp|Q8UEY9|GPH_AGRT5 Phosphoglycolate phosphatase OS=Agrobacterium tumefaciens (strain
C58 / ATCC 33970) GN=gph PE=3 SV=2
Length = 233
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQY 105
+PYPG I TL+ L+ G + V +N + + + L+ LG + + AIT G+ +
Sbjct: 94 RPYPGIIETLDALSQAGITLAVCTNKTEILAVPL--LEKLGL--TRYFAAITCGD---TF 146
Query: 106 LLRRDDA 112
R+ DA
Sbjct: 147 AFRKPDA 153
>sp|Q13206|DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10 OS=Homo sapiens GN=DDX10
PE=1 SV=2
Length = 875
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 31/205 (15%)
Query: 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG-ELTHQ- 104
P A+ L+ +T G +++IS + A T + L+ +G + AG I G +L H+
Sbjct: 126 PVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEA 185
Query: 105 YLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSG 164
+ + GR HM + +S L+++ ++EAD IL G
Sbjct: 186 ERINNINILVCTPGRLLQHMDET----VSFHATDLQML-VLDEADRILDMGFADTMNAVI 240
Query: 165 DVRPMSLQDLEKILEICASKKIP----MVVANPDYVTVEARALRVMPGTLASKFEKLGGE 220
+ P Q L + +K + + + NP+YV V +A P TL +
Sbjct: 241 ENLPKKRQTL--LFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNY------ 292
Query: 221 VRWMGKPDKVVQLLCSLSSSVIILF 245
++C L + +L+
Sbjct: 293 ------------IVCELQQKISVLY 305
>sp|P46351|YTH1_PANTH Uncharacterized 45.4 kDa protein in thiaminase I 5'region
OS=Paenibacillus thiaminolyticus PE=4 SV=1
Length = 413
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 73/185 (39%), Gaps = 27/185 (14%)
Query: 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNS-SRRASTTIDKLKSLGFD 88
F +L D GV++ G + PGA+ LE L + G + ++N+ T +L LG +
Sbjct: 6 FDVFLFDLDGVIYVGPEALPGAVEALERLRSGGKTIRFLTNNPCMTREQTAARLNRLGIE 65
Query: 89 PSLFAGAITSGELTHQYLLRRDDAWFAALG-----RSC---------------IHMTWSD 128
+ I+SG T L R LG R C + + WSD
Sbjct: 66 AAKDE-VISSGWATACCLRERRAGSVYVLGDEHLERECRDAGLDIVDVNAAEAVVVGWSD 124
Query: 129 RGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPM 188
++L + V A FI + P G + M++ + +++ AS K P
Sbjct: 125 D--LTLRDIQSAVTRIANGAQFIATNADWSFPGPDGPM--MAVGTAVEAIKM-ASGKTPY 179
Query: 189 VVANP 193
+V P
Sbjct: 180 IVGKP 184
>sp|B0C218|AROA_ACAM1 3-phosphoshikimate 1-carboxyvinyltransferase OS=Acaryochloris
marina (strain MBIC 11017) GN=aroA PE=3 SV=1
Length = 446
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 59 ATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDA-----W 113
A TG V+ S + TTI KS+ +L GA+ SGE T Q LL +D
Sbjct: 11 APTGTTWVIQSEGYLQGKTTIPGDKSISHR-ALMLGALASGETTIQGLLLGEDPRSTAHC 69
Query: 114 FAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGL 161
F ALG + + ++G+GL ++ E D +L G G L
Sbjct: 70 FRALGAEISELNTEH---VRVQGIGLG---HLLEPDVVLDAGNSGTTL 111
>sp|Q9H0R4|HDHD2_HUMAN Haloacid dehalogenase-like hydrolase domain-containing protein 2
OS=Homo sapiens GN=HDHD2 PE=1 SV=1
Length = 259
Score = 32.0 bits (71), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKL 82
+A R KA L+D G LH PGA L+ L + ++N+++ + +++L
Sbjct: 1 MAACRALKAVLVDLSGTLHIEDAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERL 60
Query: 83 KSLGFDPS 90
+ L FD S
Sbjct: 61 RKLEFDIS 68
>sp|Q9S586|GPH1_PSEAE Phosphoglycolate phosphatase 1 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gph1
PE=3 SV=1
Length = 272
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 26 ETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLK 83
ET A ++ + H + YPG + TL+ L G +M +I+N R + +D++K
Sbjct: 81 ETEAALALFMEAYADSHALTEVYPGVVDTLKWLKRNGVEMALITNKPERFVAPLLDEMK 139
>sp|Q9ZT63|MTP1_ARATH Metal tolerance protein 1 OS=Arabidopsis thaliana GN=MTP1 PE=1 SV=2
Length = 398
Score = 32.0 bits (71), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 196 VTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKVVQLLCSLSSSVIIL 244
+ ++ L V+ ++ S +GG + W K+V L+C+L+ SVI+L
Sbjct: 257 INLQGAYLHVLGDSIQSVGVMIGGAIIWYNPEWKIVDLICTLAFSVIVL 305
>sp|Q8A0U2|TPIS_BACTN Triosephosphate isomerase OS=Bacteroides thetaiotaomicron (strain
ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
GN=tpiA PE=3 SV=1
Length = 252
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 48 YPGAISTLEMLATTGAKMVVISNSSRRA 75
Y G +S EM+A+TGAK V++ +S RRA
Sbjct: 75 YTGEVSA-EMVASTGAKYVILGHSERRA 101
>sp|Q6CB69|DED1_YARLI ATP-dependent RNA helicase DED1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DED1 PE=3 SV=1
Length = 618
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 87/221 (39%), Gaps = 34/221 (15%)
Query: 44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD----PSLFAGAITSG 99
G P P M +V++ + S D+ K + P + G G
Sbjct: 226 GPSPTPQPTGPRHMHKKAYPTALVLAPTRELVSQIYDEAKKFAYRSWVRPCVVYGGADIG 285
Query: 100 ELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTE-- 157
E + R D AA GR + DRG +SLE + V++ EAD +L G E
Sbjct: 286 EQMRN-IERGCDLLVAAPGRL---VDLIDRGKVSLENIKYLVLD---EADRMLDMGFEPQ 338
Query: 158 ------GMGLPSGDVRPMSLQDLEKILEICASKKIPMVVAN--PDYVTVEARALRVMPGT 209
G G+P + R Q L + + I M+ + DY+ + G
Sbjct: 339 IRAIVQGSGMPDVNER----QTL--MFSATFPRNIQMLARDFLKDYIFLSV-------GR 385
Query: 210 LASKFEKLGGEVRWMGKPDKVVQLLCSLSSSVIILFLIFLD 250
+ S E + +V ++ DK+ LL LS++ L L+F++
Sbjct: 386 VGSTSENITQKVEYVEDGDKISALLDILSAAGKGLTLVFVE 426
>sp|P36151|YK50_YEAST Uncharacterized protein YKR070W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YKR070W PE=1 SV=1
Length = 352
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 20 GLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNS---SRRAS 76
G R T + A+ D GVL GKKP GA L++L ++++N S RA
Sbjct: 3 GKRFFQTTSKKIAFAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERAR 62
Query: 77 T 77
T
Sbjct: 63 T 63
>sp|Q28038|MIA_BOVIN Melanoma-derived growth regulatory protein OS=Bos taurus GN=MIA
PE=2 SV=1
Length = 130
Score = 31.2 bits (69), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 162 PSGDVRPM-SLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGE 220
PS RPM L D + + S I + VA DYV + R L + G + F KL G
Sbjct: 19 PSAGGRPMPKLADRKMCADEECSHPISVAVALQDYVAPDCRFLTIHQGQVVYIFSKLKGR 78
Query: 221 VR--WMG 225
R W G
Sbjct: 79 GRLFWGG 85
>sp|Q2SK73|PSRP_HAHCH Putative phosphoenolpyruvate synthase regulatory protein OS=Hahella
chejuensis (strain KCTC 2396) GN=HCH_02122 PE=3 SV=1
Length = 272
Score = 31.2 bits (69), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 2 IAKCS-VQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLAT 60
I K S + N P +F T+ AE R+ + +++D FG + + G+ ST T
Sbjct: 53 IDKASEIDGNKPVIFDTIVNSEIRAEIRKSQGYMIDIFGTFLEPLEQELGSKSTY----T 108
Query: 61 TGAKMVVISNSS 72
G ++SNSS
Sbjct: 109 VGKSHSIVSNSS 120
>sp|A7E436|DBP8_SCLS1 ATP-dependent RNA helicase dbp8 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=dbp8 PE=3 SV=1
Length = 540
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 19/150 (12%)
Query: 66 VVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG-ELTHQY--LLRRDDAWFAALGRSCI 122
+V++ + A ++ K++ SL A IT G ++ Q L +R A GR
Sbjct: 183 LVLTPTRELALQIYEQFKAISSPQSLKAVLITGGSDMRPQATALAQRPHVVIATPGRLAD 242
Query: 123 HMTWSDRGAISLEGLGLKVVENV--EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEI 180
H+ S + L+ V V +EAD +LA G+ G LP D+E+ L +
Sbjct: 243 HIRTSGEDTVC----ALRRVRMVVLDEADRLLASGSVGSMLP----------DVEECLSL 288
Query: 181 CASKKIPMVVANPDYVTVEARALRVMPGTL 210
+ VT E RAL+ MP TL
Sbjct: 289 LPPPSERQTLLFTATVTPEVRALKDMPRTL 318
>sp|A6SFV4|DBP8_BOTFB ATP-dependent RNA helicase dbp8 OS=Botryotinia fuckeliana (strain
B05.10) GN=dbp8 PE=3 SV=1
Length = 545
Score = 30.8 bits (68), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 57/135 (42%), Gaps = 19/135 (14%)
Query: 80 DKLKSLGFDPSLFAGAITSG-ELTHQY--LLRRDDAWFAALGRSCIHMTWSDRGAISLEG 136
++ K++ SL A IT G ++ Q L +R A GR H+ S I
Sbjct: 202 EQFKAISSPQSLKAVLITGGSDMRPQATALAQRPHIVIATPGRLADHIRTSGEDTIG--- 258
Query: 137 LGLKVVENV--EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPD 194
L+ V V +EAD +LA G+ G LP D+E+ L I +
Sbjct: 259 -ALRRVRMVVLDEADRLLASGSVGSMLP----------DVEECLSILPPPAKRQTLLFTA 307
Query: 195 YVTVEARALRVMPGT 209
VT E RAL+ MP T
Sbjct: 308 TVTPEVRALKDMPRT 322
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,104,628
Number of Sequences: 539616
Number of extensions: 3673130
Number of successful extensions: 10001
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 9982
Number of HSP's gapped (non-prelim): 51
length of query: 251
length of database: 191,569,459
effective HSP length: 115
effective length of query: 136
effective length of database: 129,513,619
effective search space: 17613852184
effective search space used: 17613852184
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)