BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025565
(251 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LSW8|ETFB_ARATH Electron transfer flavoprotein subunit beta, mitochondrial
OS=Arabidopsis thaliana GN=ETFB PE=1 SV=1
Length = 251
Score = 424 bits (1091), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/251 (80%), Positives = 228/251 (90%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+VA+KRVVDYAVKIRVK D+TGVET NVKMSMNPFCEIALEEALRIKE+G A EV+A
Sbjct: 1 MKILVAVKRVVDYAVKIRVKPDKTGVETQNVKMSMNPFCEIALEEALRIKEAGFAKEVIA 60
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAI 120
VS+GP+QCVDTLRTGLAMGADRG+HVE PLT+AKILKSL +VE PGLI LGKQAI
Sbjct: 61 VSIGPSQCVDTLRTGLAMGADRGIHVETNSIFLPLTIAKILKSLADVENPGLIFLGKQAI 120
Query: 121 DDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDL 180
DDDCNQTGQMVA LL WPQ TFASKVVLDK+K +A V+REVDGGLETL +DLPAVITTDL
Sbjct: 121 DDDCNQTGQMVAALLGWPQATFASKVVLDKDKNVATVDREVDGGLETLNVDLPAVITTDL 180
Query: 181 RLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSSVEEL 240
RLNQPRYA+LPNIMKAKSKPIKK T Q+L VD+KSD+E+++VTEPPKRK+GV++SSV+EL
Sbjct: 181 RLNQPRYASLPNIMKAKSKPIKKMTVQDLKVDIKSDIEILEVTEPPKRKSGVMVSSVDEL 240
Query: 241 IDKLKNEARVI 251
IDKLKNEA V+
Sbjct: 241 IDKLKNEAHVV 251
>sp|Q7F9U3|ETFB_ORYSJ Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza
sativa subsp. japonica GN=ETFB PE=3 SV=1
Length = 253
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/255 (75%), Positives = 228/255 (89%), Gaps = 6/255 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+VA+KRVVDYAVK+RV+ DRTGVET +VKMSMNPFCEIA+EEALR++ESG A+EVVA
Sbjct: 1 MKILVAVKRVVDYAVKVRVRPDRTGVETASVKMSMNPFCEIAVEEALRLRESGAATEVVA 60
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHV----EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
++GP+Q DTLRT LAMGADR VHV + + L PL VAKIL++L E PGL+ILG
Sbjct: 61 ATVGPSQSADTLRTALAMGADRAVHVLHDPDPSRPLLPLAVAKILRALALQENPGLVILG 120
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
KQAIDDDCNQTGQM+AGLL+WPQGTFASKV+L+KEK A VEREVDGG+ET+ LDLPAVI
Sbjct: 121 KQAIDDDCNQTGQMLAGLLNWPQGTFASKVILNKEK--ATVEREVDGGIETISLDLPAVI 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSS 236
TTDLRLNQPRYATLPNIMKAKSK IKK TP++L+VD++SD+EV++VTEPPKRKAGVILSS
Sbjct: 179 TTDLRLNQPRYATLPNIMKAKSKVIKKVTPEDLDVDIRSDMEVVEVTEPPKRKAGVILSS 238
Query: 237 VEELIDKLKNEARVI 251
V+EL+D+LKNEARV+
Sbjct: 239 VDELVDRLKNEARVL 253
>sp|A2XQV4|ETFB_ORYSI Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza
sativa subsp. indica GN=ETFB PE=3 SV=1
Length = 253
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/255 (75%), Positives = 228/255 (89%), Gaps = 6/255 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+VA+KRVVDYAVK+RV+ DRTGVET +VKMSMNPFCEIA+EEALR++E+G A+EVVA
Sbjct: 1 MKILVAVKRVVDYAVKVRVRPDRTGVETASVKMSMNPFCEIAVEEALRLREAGAATEVVA 60
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHV----EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
++GP+Q DTLRT LAMGADR VHV + + L PL VAKIL++L E PGL+ILG
Sbjct: 61 ATVGPSQSADTLRTALAMGADRAVHVLHDPDPSRPLLPLAVAKILRALALQENPGLVILG 120
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
KQAIDDDCNQTGQM+AGLL+WPQGTFASKV+L+KEK A VEREVDGG+ET+ LDLPAVI
Sbjct: 121 KQAIDDDCNQTGQMLAGLLNWPQGTFASKVILNKEK--ATVEREVDGGIETISLDLPAVI 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSS 236
TTDLRLNQPRYATLPNIMKAKSK IKK TP++L+VD++SD+EV++VTEPPKRKAGVILSS
Sbjct: 179 TTDLRLNQPRYATLPNIMKAKSKVIKKVTPEDLDVDIRSDMEVVEVTEPPKRKAGVILSS 238
Query: 237 VEELIDKLKNEARVI 251
V+ELID+LKNEARV+
Sbjct: 239 VDELIDRLKNEARVL 253
>sp|Q54YZ4|ETFB_DICDI Electron transfer flavoprotein subunit beta OS=Dictyostelium
discoideum GN=etfb PE=3 SV=1
Length = 250
Score = 325 bits (834), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/250 (63%), Positives = 195/250 (78%), Gaps = 2/250 (0%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
+KI+V IKRVVDYAVKIRVK D++GVET NVKMSMNPF EIA+EEA+RIKE LA E++A
Sbjct: 3 LKILVPIKRVVDYAVKIRVKGDKSGVETANVKMSMNPFDEIAVEEAIRIKEKNLAKEIIA 62
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAI 120
VSMGP +T+RT +AMGAD+G+HVE +L PL+VAK+LK LV+ EKP LIILGKQAI
Sbjct: 63 VSMGPKTSQETIRTAIAMGADKGIHVETTAELQPLSVAKLLKELVDKEKPNLIILGKQAI 122
Query: 121 DDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDL 180
DDDCNQT QM+AGLL+WPQ TFASKV D + V RE+DGGLETL + LPA+I+ DL
Sbjct: 123 DDDCNQTAQMLAGLLNWPQATFASKV--DIKDDSVHVTREIDGGLETLSMKLPAIISCDL 180
Query: 181 RLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSSVEEL 240
RLN+PRYA L NIMK+K +K TP+ LNVD +L++I V EPPKR GV + SVE +
Sbjct: 181 RLNEPRYAKLQNIMKSKKAELKVETPESLNVDTNCNLKIISVEEPPKRSGGVKVESVENV 240
Query: 241 IDKLKNEARV 250
++ LK A +
Sbjct: 241 VEALKKHALI 250
>sp|P38117|ETFB_HUMAN Electron transfer flavoprotein subunit beta OS=Homo sapiens GN=ETFB
PE=1 SV=3
Length = 255
Score = 324 bits (831), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/254 (63%), Positives = 197/254 (77%), Gaps = 6/254 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
++++VA+KRV+DYAVKIRVK DRTGV T+ VK SMNPFCEIA+EEA+R+KE L EV+A
Sbjct: 4 LRVLVAVKRVIDYAVKIRVKPDRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIA 63
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHVEA----AGQLYPLTVAKILKSLVEVEKPGLIILG 116
VS GPAQC +T+RT LAMGADRG+HVE A +L PL VA++L L E EK L++LG
Sbjct: 64 VSCGPAQCQETIRTALAMGADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLG 123
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
KQAIDDDCNQTGQM AG L WPQGTFAS+V L+ +K VERE+DGGLETL L LPAV+
Sbjct: 124 KQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDK--LKVEREIDGGLETLRLKLPAVV 181
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSS 236
T DLRLN+PRYATLPNIMKAK K I+ P +L VD+ S L VI V +PP+R AGV + +
Sbjct: 182 TADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDLTSKLSVISVEDPPQRTAGVKVET 241
Query: 237 VEELIDKLKNEARV 250
E+L+ KLK R+
Sbjct: 242 TEDLVAKLKEIGRI 255
>sp|Q5RFK0|ETFB_PONAB Electron transfer flavoprotein subunit beta OS=Pongo abelii GN=ETFB
PE=2 SV=3
Length = 255
Score = 323 bits (827), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 162/254 (63%), Positives = 196/254 (77%), Gaps = 6/254 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
++ +VA+KRV+DYAVKIRVK DRTGV T+ VK SMNPFCEIA+EEA+R+KE L EV+A
Sbjct: 4 LRALVAVKRVIDYAVKIRVKPDRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIA 63
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHVEA----AGQLYPLTVAKILKSLVEVEKPGLIILG 116
VS GPAQC +T+RT LAMGADRG+HVE A +L PL VA++L L E EK L++LG
Sbjct: 64 VSCGPAQCQETIRTALAMGADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLG 123
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
KQAIDDDCNQTGQM AG L WPQGTFAS+V L+ +K VERE+DGGLETL L LPAV+
Sbjct: 124 KQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDK--LKVEREIDGGLETLRLKLPAVV 181
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSS 236
T DLRLN+PRYATLPNIMKAK K I+ P +L VD+ S L VI V +PP+R AGV + +
Sbjct: 182 TADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDLTSKLSVISVEDPPQRTAGVKVET 241
Query: 237 VEELIDKLKNEARV 250
E+L+ KLK R+
Sbjct: 242 TEDLVAKLKEIGRI 255
>sp|P53575|ETFB_BRAJA Electron transfer flavoprotein subunit beta OS=Bradyrhizobium
japonicum (strain USDA 110) GN=etfB PE=3 SV=2
Length = 249
Score = 321 bits (822), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 164/251 (65%), Positives = 197/251 (78%), Gaps = 2/251 (0%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MK++V +KRVVDY VK+RVK D +GVE NVKMSMNPF EIA+EEALR+KE G A+EVV
Sbjct: 1 MKVLVPVKRVVDYNVKVRVKGDGSGVELANVKMSMNPFDEIAVEEALRLKEGGKATEVVV 60
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAI 120
VS+GPAQ +T+RTGLAMGADRG+ V+A G + PL VAKILK + E E+PGLIILGKQAI
Sbjct: 61 VSIGPAQASETIRTGLAMGADRGILVKAEGTVEPLAVAKILKKVAEEEQPGLIILGKQAI 120
Query: 121 DDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDL 180
DDD NQTGQM+A LL W Q TFASK L+ E V REVDGGL+T++L PA++TTDL
Sbjct: 121 DDDSNQTGQMLAALLGWSQATFASK--LEVEGSDFKVTREVDGGLQTVKLKGPAIVTTDL 178
Query: 181 RLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSSVEEL 240
RLN+PRYA+LPNIMKAK KPI + T + VDV + LEV++ TEP RKAGV + V EL
Sbjct: 179 RLNEPRYASLPNIMKAKKKPIAEKTVADYGVDVTARLEVLKTTEPAGRKAGVKVKDVAEL 238
Query: 241 IDKLKNEARVI 251
+ KLKNEA V+
Sbjct: 239 VSKLKNEAGVL 249
>sp|Q2TBV3|ETFB_BOVIN Electron transfer flavoprotein subunit beta OS=Bos taurus GN=ETFB
PE=2 SV=3
Length = 255
Score = 318 bits (814), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/254 (62%), Positives = 194/254 (76%), Gaps = 6/254 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
++ +VA+KRV+D+AVKIRVK D+TGV T+ VK SMNPFCEIA+EEA+R+KE L E++A
Sbjct: 4 LRALVAVKRVIDFAVKIRVKPDKTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEIIA 63
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHVEA----AGQLYPLTVAKILKSLVEVEKPGLIILG 116
VS GPAQC +T+RT LAMGADRG+HVE A L PL VA++L L E EK L++LG
Sbjct: 64 VSCGPAQCQETIRTALAMGADRGIHVEVPAAEANHLGPLQVARVLAKLAEKEKVDLVLLG 123
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
KQAIDDDCNQTGQM AG L WPQGTFAS+V L+ +K VERE+DGGLETL L LPAV+
Sbjct: 124 KQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDK--IKVEREIDGGLETLRLKLPAVV 181
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSS 236
T DLRLN+PRYATLPNIMKAK K I+ +L VD+ S L VI V +PP+R AGV + +
Sbjct: 182 TADLRLNEPRYATLPNIMKAKKKKIEVIKAGDLGVDLTSKLSVISVEDPPQRTAGVKVET 241
Query: 237 VEELIDKLKNEARV 250
E+L+ KLK R+
Sbjct: 242 TEDLVAKLKEIGRI 255
>sp|Q9DCW4|ETFB_MOUSE Electron transfer flavoprotein subunit beta OS=Mus musculus GN=Etfb
PE=1 SV=3
Length = 255
Score = 316 bits (810), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/254 (61%), Positives = 194/254 (76%), Gaps = 6/254 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
++ +VA+KRV+D+AVKIRVK D++GV T+ VK SMNPFCEIA+EEA+R+KE L E++A
Sbjct: 4 LRALVAVKRVIDFAVKIRVKPDKSGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEIIA 63
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHVEAAG----QLYPLTVAKILKSLVEVEKPGLIILG 116
VS GP+QC +T+RT LAMGADRG+HVE G L PL VA++L L E EK L+ LG
Sbjct: 64 VSCGPSQCQETIRTALAMGADRGIHVEIPGAQAESLGPLQVARVLAKLAEKEKVDLLFLG 123
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
KQAIDDDCNQTGQM AGLL WPQGTFAS+V L+ +K VERE+DGGLETL L LPAV+
Sbjct: 124 KQAIDDDCNQTGQMTAGLLDWPQGTFASQVTLEGDK--VKVEREIDGGLETLRLKLPAVV 181
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSS 236
T DLRLN+PRYATLPNIMKAK K I+ +L VD+ S + VI V EPP+R AGV + +
Sbjct: 182 TADLRLNEPRYATLPNIMKAKKKKIEVVKAGDLGVDLTSKVSVISVEEPPQRSAGVKVET 241
Query: 237 VEELIDKLKNEARV 250
E+L+ KLK R+
Sbjct: 242 TEDLVAKLKEVGRI 255
>sp|Q6UAQ8|ETFB_PIG Electron transfer flavoprotein subunit beta OS=Sus scrofa GN=ETFB
PE=2 SV=3
Length = 255
Score = 314 bits (804), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 156/254 (61%), Positives = 193/254 (75%), Gaps = 6/254 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
++ +VA+KRV+D+AVKIRVK DRTGV + VK SMNPFCEIA+EEA+R+KE L EV+A
Sbjct: 4 LRALVAVKRVIDFAVKIRVKPDRTGVVMDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIA 63
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHVEA----AGQLYPLTVAKILKSLVEVEKPGLIILG 116
VS GPAQC +T+RT LAMGADRG+HVE A L PL VA++L L + EK L++LG
Sbjct: 64 VSCGPAQCQETIRTALAMGADRGIHVEVPAAEAHHLGPLQVARVLAKLAQKEKVDLVLLG 123
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
KQAIDDDCNQTGQM AG L WPQGTFAS+V L+ +K VERE+DGGLETL L LPAV+
Sbjct: 124 KQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDK--VKVEREIDGGLETLRLKLPAVV 181
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSS 236
T DLRLN+PRYATLPNIMKAK K I+ +L VD+ S L V+ V +PP+R AGV + +
Sbjct: 182 TADLRLNEPRYATLPNIMKAKKKKIEVIKAGDLGVDLTSKLSVVSVEDPPQRVAGVKVET 241
Query: 237 VEELIDKLKNEARV 250
E+L+ KL+ R+
Sbjct: 242 TEDLVAKLREIGRI 255
>sp|Q68FU3|ETFB_RAT Electron transfer flavoprotein subunit beta OS=Rattus norvegicus
GN=Etfb PE=2 SV=3
Length = 255
Score = 313 bits (801), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 156/254 (61%), Positives = 193/254 (75%), Gaps = 6/254 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
++ +VA+KRV+D+AVKIRVK D++GV T+ VK SMNPFCEIA+EEA+R+KE L E++A
Sbjct: 4 LRALVAVKRVIDFAVKIRVKPDKSGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEIIA 63
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHVEAAG----QLYPLTVAKILKSLVEVEKPGLIILG 116
VS GP QC +T+RT LAMGADRG+HVE G L PL VA++L L E EK L+ LG
Sbjct: 64 VSCGPPQCQETIRTALAMGADRGIHVEVPGAEAENLGPLQVARVLAKLAEKEKVDLLFLG 123
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
KQAIDDDCNQTGQM AGLL WPQGTFAS+V L+ +K VERE+DGGLET+ L LPAV+
Sbjct: 124 KQAIDDDCNQTGQMTAGLLDWPQGTFASQVTLEGDK--VKVEREIDGGLETIRLKLPAVV 181
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSS 236
T DLRLN+PRYATLPNIMKAK K I+ +L VD+ S + VI V EPP+R AGV + +
Sbjct: 182 TADLRLNEPRYATLPNIMKAKKKKIEVIKAGDLGVDLTSKVSVISVEEPPQRLAGVKVET 241
Query: 237 VEELIDKLKNEARV 250
E+L+ KLK R+
Sbjct: 242 TEDLVAKLKEVGRI 255
>sp|Q9HZP6|ETFB_PSEAE Electron transfer flavoprotein subunit beta OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=etfB PE=3 SV=1
Length = 249
Score = 305 bits (780), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/251 (59%), Positives = 196/251 (78%), Gaps = 2/251 (0%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MK++VA+KRVVDY VK+RVK+D +GV+ NVKMSMNPFCEIA+EEA+R+KE G+A+E+VA
Sbjct: 1 MKVLVAVKRVVDYNVKVRVKADNSGVDLANVKMSMNPFCEIAVEEAVRLKEKGVATEIVA 60
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAI 120
VS+GP + LRT LA+GADR + VE+ +L L VAK+LK++V+ E+P L+ILGKQAI
Sbjct: 61 VSVGPTAAQEQLRTALALGADRAILVESNDELNSLAVAKLLKAVVDKEQPQLVILGKQAI 120
Query: 121 DDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDL 180
D D NQTGQM+A L + QGTFASKV + +K V RE+DGGL+T+ L+LPA++TTDL
Sbjct: 121 DSDNNQTGQMLAALTGYAQGTFASKVEVAGDK--VNVTREIDGGLQTVALNLPAIVTTDL 178
Query: 181 RLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSSVEEL 240
RLN+PRYA+LPNIMKAK KP+ TP L V S ++ ++V P R AG+ + SV EL
Sbjct: 179 RLNEPRYASLPNIMKAKKKPLDVVTPDALGVSTASTVKTLKVEAPAARSAGIKVKSVAEL 238
Query: 241 IDKLKNEARVI 251
++KLKNEA+VI
Sbjct: 239 VEKLKNEAKVI 249
>sp|P38975|ETFB_PARDE Electron transfer flavoprotein subunit beta OS=Paracoccus
denitrificans GN=etfB PE=1 SV=1
Length = 252
Score = 280 bits (715), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 149/255 (58%), Positives = 186/255 (72%), Gaps = 7/255 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MK++V +KR++DY VK RVKSD +GV+ NVKMSMNPF EIA+EEA+R+KE G A E++A
Sbjct: 1 MKVLVPVKRLIDYNVKARVKSDGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGQAEEIIA 60
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHVEAAG----QLYPLTVAKILKSLVEVEKPGLIILG 116
VS+G Q +TLRT LAMGADR + V AA + PL VAKIL ++ E LII G
Sbjct: 61 VSIGVKQAAETLRTALAMGADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAG 120
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
KQAID+D N TGQM+A +L W Q TFASKV ++ K A V REVDGGL+T+ + LPAV+
Sbjct: 121 KQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAK--AKVTREVDGGLQTIAVSLPAVV 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSS 236
T DLRLN+PRYA+LPNIMKAK KP+ + T + VDV LEV+ V EP RKAG+ + S
Sbjct: 179 TADLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVAPRLEVVSVREPEGRKAGIKVGS 238
Query: 237 VEELIDKLKNEARVI 251
V+EL+ KLK EA VI
Sbjct: 239 VDELVGKLK-EAGVI 252
>sp|P42940|ETFB_YEAST Probable electron transfer flavoprotein subunit beta
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CIR1 PE=1 SV=1
Length = 261
Score = 226 bits (576), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/255 (49%), Positives = 173/255 (67%), Gaps = 15/255 (5%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESG--LASEV 58
++I+V +KRVVD+ +K RV TG+ET+ +K S+NPF +IA+EEA+RIKE L
Sbjct: 7 LRILVPVKRVVDFQIKPRVNKTLTGIETSGIKFSINPFDDIAVEEAIRIKEKNKSLVEST 66
Query: 59 VAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQ--LYPLTVAKILKSLVEVEKPGLIILG 116
AVS+G A+ D LR LA G D +++ G+ + PL +AKILK++VE + L+++G
Sbjct: 67 HAVSIGSAKAQDILRNCLAKGIDTCSLIDSVGKENIEPLAIAKILKAVVEKKGSNLVLMG 126
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKV-VLDKEKQLAMVEREVDGGLETLELDLPAV 175
KQAIDDDCN TGQM+AGLL+WPQ T A+KV LD + V RE+D G E +E LP V
Sbjct: 127 KQAIDDDCNNTGQMLAGLLNWPQATNAAKVEFLDNGR--VQVTREIDDGEEVIEASLPMV 184
Query: 176 ITTDLRLNQPRYATLPNIMKAKSKPIKKYT-----PQELNVDVKSDLEVIQVTEPPKRKA 230
ITTDLRLN PRY LP +MKAK KPI+K P+ ++++ L+++ + EP +
Sbjct: 185 ITTDLRLNTPRYVGLPKLMKAKKKPIEKLDIAKDFPE---INIEPQLKIVSMEEPKTKSP 241
Query: 231 GVILSSVEELIDKLK 245
GV L+SV+ELI+KLK
Sbjct: 242 GVKLNSVDELIEKLK 256
>sp|Q9UTH2|ETFB_SCHPO Probable electron transfer flavoprotein subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC1805.02c PE=3 SV=1
Length = 254
Score = 216 bits (551), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 111/248 (44%), Positives = 167/248 (67%), Gaps = 5/248 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKES--GLASEV 58
++I+V +KR +DY +K R+ + +T V+ + KMS+NPFC+IA+EEA+R+KE+ +
Sbjct: 4 IRILVGVKRTLDYMLKPRINATKTAVDLSGQKMSINPFCDIAVEEAIRMKETLKNRIEDT 63
Query: 59 VAVSMGPAQCVDTLRTGLAMGADRGVHVEAA-GQLYPLTVAKILKSLVEVEKPGLIILGK 117
+ V+ G LR LA G R + +L PL+VAK+LK+ VE EK L++LGK
Sbjct: 64 LVVTAGQTSSEPILRQCLAKGIGRAALINVGEKELEPLSVAKLLKATVEKEKSNLVLLGK 123
Query: 118 QAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVIT 177
QAIDDD +QTG M+A +L WPQ T ASKV ++ +K +V RE+DGG ETL LPA+IT
Sbjct: 124 QAIDDDAHQTGGMLAAMLGWPQFTSASKVRIEGDK--VIVTREIDGGEETLSSTLPAIIT 181
Query: 178 TDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVILSSV 237
TDLRLN PR+A L +MKA+ P+ K +P++L V + L+ + V+EP +++ +++ SV
Sbjct: 182 TDLRLNVPRFANLAKVMKARKAPLGKMSPEDLGVTIDQRLQTVSVSEPVQKRQNIMVKSV 241
Query: 238 EELIDKLK 245
+E++ LK
Sbjct: 242 DEMVKTLK 249
>sp|P53570|ETFB_METME Electron transfer flavoprotein subunit beta OS=Methylophilus
methylotrophus GN=etfB PE=1 SV=1
Length = 264
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 121/209 (57%), Gaps = 4/209 (1%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESG-LASEVV 59
MKI+VA+K+ ++ D V+ + + +N + + +LEEA++IKES EVV
Sbjct: 1 MKILVAVKQTAALEEDFEIREDGMDVDEDFMMYDLNEWDDFSLEEAMKIKESSDTDVEVV 60
Query: 60 AVSMGPAQCVDTLRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILGK 117
VS+GP + ++LR LA GADR V V +AA + V +IL +++ E P ++ G
Sbjct: 61 VVSVGPDRVDESLRKCLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGV 120
Query: 118 QAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGG-LETLELDLPAVI 176
Q+ D TG VA L+WP + + A++ RE++GG L+ +E++ PAV+
Sbjct: 121 QSSDQAYASTGISVASYLNWPHAAVVADLQYKPGDNKAVIRRELEGGMLQEVEINCPAVL 180
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYT 205
T L +N+PRYA+L I +A +KPI++ +
Sbjct: 181 TIQLGINKPRYASLRGIKQAATKPIEEVS 209
>sp|P94550|ETFB_BACSU Electron transfer flavoprotein subunit beta OS=Bacillus subtilis
(strain 168) GN=etfB PE=3 SV=1
Length = 257
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 141/262 (53%), Gaps = 16/262 (6%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
M + V +KR D KI +++ + ++ + + +NP+ E A+EEA+++KE + A
Sbjct: 1 MNLFVLMKRTFDTEEKIVIETGK--IQDDGAEWIINPYDEYAIEEAIQLKEKH-GGTITA 57
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYP---LTVAKILKSLVEVEKPGLIILGK 117
V++G + LRT LAMG D+ V + L +++++L ++ ++ LI+ G
Sbjct: 58 VTVGGEEAEKELRTALAMGCDQAVLINIEDDLDEPDQYSISQVLYHYMKDQEFDLILGGN 117
Query: 118 QAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVIT 177
AID Q +A LL P T +K+ ++ A ER+V+G +E ++ LP ++T
Sbjct: 118 VAIDGGSGQVAPRLAELLDIPCITTITKLEINGTD--AEAERDVEGDVEKIKTTLPLLVT 175
Query: 178 TDLRLNQPRYATLPNIMKAKSKP---IKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVIL 234
LN+PRY +LP IMKAK KP ++ D + L+ I+ PPK++AG +L
Sbjct: 176 AQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDLDEEDAEPKLKTIERFLPPKKEAGKLL 235
Query: 235 SS-----VEELIDKLKNEARVI 251
+EL+ L++EA+VI
Sbjct: 236 QGEPAEQAKELVSLLRSEAKVI 257
>sp|P97089|ETFB_THETC Electron transfer flavoprotein subunit beta
OS=Thermoanaerobacterium thermosaccharolyticum (strain
ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) GN=etfB PE=3
SV=1
Length = 260
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 136/268 (50%), Gaps = 25/268 (9%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
M I+V IK+V D ++R+ + V +NP + ALEEA+RI+E + +V
Sbjct: 1 MNILVLIKQVPDTN-EVRIDPVTKTLIREGVPSIINPDDKNALEEAIRIREK-VGGKVTV 58
Query: 61 VSMGPAQCVDTLRTGLAMGADRGV----HVEAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
+SMGP Q LR LAMGAD A Y AK L +E + ++ G
Sbjct: 59 ISMGPTQAEVALREALAMGADEAYLLTDRAFAGADTY--ATAKALSKAIEKFQYDIVFCG 116
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
+QAID D Q G +A L PQ T+ KV ++ +K +VER ++ G E +E+ P ++
Sbjct: 117 RQAIDGDTAQVGPQIAEQLDIPQVTYVRKVEIEGDK--LIVERALEDGYEIIEVKTPVLL 174
Query: 177 TTDLRLNQPRYATLPNIMKAKSKP-IKKYTPQELNVDVKSDL-------EVIQVTEPPKR 228
T LN PRY ++ I A +K +K T +L VD K++L +V+ + P
Sbjct: 175 TAIKELNVPRYPSIKGIFNAYNKKEVKILTADDLEVD-KNELGLKGSPTKVVATSTPNTE 233
Query: 229 KAGVILS-----SVEELIDKLKNEARVI 251
+AG I + +V+ L+++L N VI
Sbjct: 234 RAGEIFTGNIKEAVQNLVERL-NSRHVI 260
>sp|O85691|ETFB_MEGEL Electron transfer flavoprotein subunit beta OS=Megasphaera elsdenii
GN=etfB PE=3 SV=1
Length = 270
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 22/251 (8%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
M+I+V +K+V D A ++++ + V V NPF + ALE AL +K++ ++
Sbjct: 1 MEILVCVKQVPDTA-EVKIDPVKHTVIRAGVPNIFNPFDQNALEAALALKDADKDVKITL 59
Query: 61 VSMGPAQCVDTLRTGLAMGADR----------GVHVEAAGQLYPLTVA-KILKSLVEVEK 109
+SMGP Q D LR GLAMGAD G A G Y L A K L + +E+
Sbjct: 60 LSMGPDQAKDVLREGLAMGADDAYLLSDRKLGGSDTLATG--YALAQAIKKLAADKGIEQ 117
Query: 110 PGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLE 169
+I+ GKQAID D Q G +A L PQ T+A + ++ +K V++E + G E
Sbjct: 118 FDIILCGKQAIDGDTAQVGPQIACELGIPQITYARDIKVEGDK--VTVQQENEEGYIVTE 175
Query: 170 LDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVK------SDLEVIQVT 223
P +IT LN+PR+ T+ MKAK + I + D S +V ++
Sbjct: 176 AQFPVLITAVKDLNEPRFPTIRGTMKAKRREIPNLDAAAVAADDAQIGLSGSPTKVRKIF 235
Query: 224 EPPKRKAGVIL 234
PP+R G++L
Sbjct: 236 TPPQRSGGLVL 246
>sp|P52040|ETFB_CLOAB Electron transfer flavoprotein subunit beta OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=etfB PE=3 SV=2
Length = 259
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 6/214 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
M I+V +K+V D A ++R+ + + V +NP + ALEEAL +K++ + V
Sbjct: 1 MNIVVCLKQVPDTA-EVRIDPVKGTLIREGVPSIINPDDKNALEEALVLKDN-YGAHVTV 58
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILGKQ 118
+SMGP Q + L LAMGAD V + A G L + + + ++ K ++ G+Q
Sbjct: 59 ISMGPPQAKNALVEALAMGADEAVLLTDRAFGGADTLATSHTIAAGIKKLKYDIVFAGRQ 118
Query: 119 AIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITT 178
AID D Q G +A L PQ T+ KV +D + + + + G E +E+ P ++T
Sbjct: 119 AIDGDTAQVGPEIAEHLGIPQVTYVEKVEVDGD--TLKIRKAWEDGYEVVEVKTPVLLTA 176
Query: 179 DLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVD 212
LN PRY ++ I A K +K +T +++VD
Sbjct: 177 IKELNVPRYMSVEKIFGAFDKEVKMWTADDIDVD 210
>sp|Q53210|FIXA_RHISN Protein FixA OS=Rhizobium sp. (strain NGR234) GN=fixA PE=3 SV=1
Length = 285
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 128/266 (48%), Gaps = 24/266 (9%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
M I+V IK+V D A +IRV + V +NP+ ALE+AL++++ EV
Sbjct: 1 MHIVVCIKQVPDSA-QIRVHPVTNTIMRQGVPTIINPYDLFALEQALQVRDHH-GGEVTV 58
Query: 61 VSMGPAQCVDTLRTGLAMGADRGV-----HVEAAGQL---YPLT--VAKILKSLVEVEKP 110
++MGP ++LR L GADR + H + L + L+ +AKI S P
Sbjct: 59 LTMGPPMAEESLRKALTYGADRAILLTDRHFAGSDTLATSFALSQAIAKIGNSF---GSP 115
Query: 111 GLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVV-LDKEKQLAMVEREVDGGLETLE 169
++ GKQ ID D Q G +A L Q T+ +KV +D + VER +GG L+
Sbjct: 116 DIVFTGKQTIDGDTAQVGPGIAKRLDLVQLTYVAKVTSIDLRTRAITVERRAEGGTHVLK 175
Query: 170 LDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVD--VKSDLE-----VIQV 222
+LP +IT N R +L + ++A I K+ E ++ K L V +V
Sbjct: 176 SELPCLITMLEGSNAIRRGSLDDALRAARSEIVKWNAVEAGIEDITKCGLRGSPTVVKRV 235
Query: 223 TEP-PKRKAGVILSSVEELIDKLKNE 247
P P+ + V + +VE+ + + NE
Sbjct: 236 FAPTPREQKAVQIDTVEKAMQDVANE 261
>sp|P64097|ETFB_MYCTU Electron transfer flavoprotein subunit beta OS=Mycobacterium
tuberculosis GN=etfB PE=3 SV=1
Length = 266
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 118/242 (48%), Gaps = 15/242 (6%)
Query: 3 IMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKE----SGLASEV 58
I+V IK+V D + ++ ++ ++ E A+EEAL+I+E G+ V
Sbjct: 4 IVVLIKQVPDTWSERKLTDGDFTLDREAADAVLDEINERAVEEALQIREKEAADGIEGSV 63
Query: 59 VAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYP---LTVAKILKSLVEVEKPGLIIL 115
++ GP + + +R L+MGAD+ VH++ G T + ++L +E L+I
Sbjct: 64 TVLTAGPERATEAIRKALSMGADKAVHLKDDGMHGSDVIQTGWALARALGTIEGTELVIA 123
Query: 116 GKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAV 175
G ++ D ++A L PQ T KV ++ K ERE D G+ TLE LPAV
Sbjct: 124 GNESTDGVGGAVPAIIAEYLGLPQLTHLRKVSIEGGKITG--ERETDEGVFTLEATLPAV 181
Query: 176 ITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVD------VKSDLEVIQVTEPPKRK 229
I+ + ++N+PR+ + IM AK K + T E+ V+ + V+ T P +
Sbjct: 182 ISVNEKINEPRFPSFKGIMAAKKKEVTVLTLAEIGVESDEVGLANAGSTVLASTPKPAKT 241
Query: 230 AG 231
AG
Sbjct: 242 AG 243
>sp|P64098|ETFB_MYCBO Electron transfer flavoprotein subunit beta OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=etfB PE=1 SV=1
Length = 266
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 118/242 (48%), Gaps = 15/242 (6%)
Query: 3 IMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKE----SGLASEV 58
I+V IK+V D + ++ ++ ++ E A+EEAL+I+E G+ V
Sbjct: 4 IVVLIKQVPDTWSERKLTDGDFTLDREAADAVLDEINERAVEEALQIREKEAADGIEGSV 63
Query: 59 VAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYP---LTVAKILKSLVEVEKPGLIIL 115
++ GP + + +R L+MGAD+ VH++ G T + ++L +E L+I
Sbjct: 64 TVLTAGPERATEAIRKALSMGADKAVHLKDDGMHGSDVIQTGWALARALGTIEGTELVIA 123
Query: 116 GKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAV 175
G ++ D ++A L PQ T KV ++ K ERE D G+ TLE LPAV
Sbjct: 124 GNESTDGVGGAVPAIIAEYLGLPQLTHLRKVSIEGGKITG--ERETDEGVFTLEATLPAV 181
Query: 176 ITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVD------VKSDLEVIQVTEPPKRK 229
I+ + ++N+PR+ + IM AK K + T E+ V+ + V+ T P +
Sbjct: 182 ISVNEKINEPRFPSFKGIMAAKKKEVTVLTLAEIGVESDEVGLANAGSTVLASTPKPAKT 241
Query: 230 AG 231
AG
Sbjct: 242 AG 243
>sp|P53576|FIXA_AZOVI Protein FixA OS=Azotobacter vinelandii GN=fixA PE=3 SV=1
Length = 281
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
M +V IK++ D A +IRV + V +NP+ ALEEALR+K+ V
Sbjct: 1 MHSVVCIKQLPDSA-QIRVHPVTNTIMRQGVPAIINPYDLFALEEALRLKDK-FGGTVTV 58
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHVE---AAGQ---LYPLTVAKILKSLVEVEKPGLII 114
V+MGP LR L+ GAD + V AG ++ +++ ++E LI
Sbjct: 59 VTMGPPMAEAALRKCLSFGADDAILVSDRAFAGSDTLATSYALSAVIRKIMEDMPVDLIF 118
Query: 115 LGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVV-LDKEKQLAMVEREVDGGLETLELDLP 173
GKQ ID D Q G +A L + T+ S++V +D K+ VER +GG++ LE LP
Sbjct: 119 TGKQTIDGDTAQVGPGIAKRLDYQLLTYVSRIVDVDTAKKEIQVERRAEGGVQLLETSLP 178
Query: 174 AVITTDLRLNQPRYATLPNIMKAKSKPIKKY 204
+IT N+ R+ L ++ +A +K +
Sbjct: 179 CLITMLEGTNEMRFGDLDDLFRAARHELKVW 209
>sp|O33095|ETFB_MYCLE Electron transfer flavoprotein subunit beta OS=Mycobacterium leprae
(strain TN) GN=etfB PE=3 SV=1
Length = 266
Score = 87.4 bits (215), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 119/242 (49%), Gaps = 15/242 (6%)
Query: 3 IMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKE----SGLASEV 58
I+V IK+V D + ++ ++ ++ E A+EEAL+I+E G+ V
Sbjct: 4 IVVLIKQVPDTWSERKLTDGDFTLDREAADAVLDEINERAVEEALQIREKEAVDGIKGSV 63
Query: 59 VAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYP---LTVAKILKSLVEVEKPGLIIL 115
++ GP + + +R L+MGAD+ VH++ G T + ++L +E L+I
Sbjct: 64 TVLTAGPERATEAIRKALSMGADKAVHLKDDGMHGSDVIQTGWALARALGTIEGTELVIA 123
Query: 116 GKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAV 175
G ++ D ++A L PQ T + ++ K ERE D G+ TLE LPAV
Sbjct: 124 GNESTDGVGGVVPAIIAEYLGLPQLTHLRTISVEGGKITG--ERETDEGVFTLEAVLPAV 181
Query: 176 ITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDV------KSDLEVIQVTEPPKRK 229
++ + ++N+PR+ + IM AK K + T E+ V+V + +V+ T P +
Sbjct: 182 VSVNEKINEPRFPSFKGIMAAKKKEVTVLTLAEIGVEVDEVGLANAGSKVLVSTPKPAKT 241
Query: 230 AG 231
AG
Sbjct: 242 AG 243
>sp|P53577|FIXA_BRAJA Protein FixA OS=Bradyrhizobium japonicum (strain USDA 110) GN=fixA
PE=3 SV=2
Length = 288
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 12/221 (5%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
M +V IK+V D A +IRV + V +NP+ ALE AL +++ E+
Sbjct: 1 MHNIVCIKQVPDSA-QIRVHPVTNTIMRQGVPTIINPYDLFALEAALGLRDR-FGGEITV 58
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHV--------EAAGQLYPLTVAKILKSLVEVEKPGL 112
++MGP ++LR L GADR V + + Y L A I K E L
Sbjct: 59 LTMGPPSAEESLRKALTYGADRAVLLTDRCFAGSDTLATTYALATA-IRKIGKEYGPANL 117
Query: 113 IILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKV-VLDKEKQLAMVEREVDGGLETLELD 171
I GKQ ID D Q G +A L Q T+ +KV +D + ER +GG++ L
Sbjct: 118 IFTGKQTIDGDTAQVGPGIAKRLGVGQLTYVAKVRSVDVANETIEAERRSEGGVQVLHTR 177
Query: 172 LPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVD 212
LP +IT NQ R + + ++A I K++ Q+ V+
Sbjct: 178 LPCLITMLEATNQIRRGAMADALRAARAKIVKWSAQDAGVE 218
>sp|P09818|FIXA_RHIME Protein FixA OS=Rhizobium meliloti (strain 1021) GN=fixA PE=3 SV=1
Length = 292
Score = 80.9 bits (198), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 10/219 (4%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
M ++V IK+V D A +IRV + V +NP ALEEAL++ ++ EV
Sbjct: 1 MHLVVCIKQVPDSA-QIRVHPVTNTIMRQGVPTIINPHDLAALEEALKLCDT-YGGEVTV 58
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHV---EAAGQLYPLTVAKILKSLVEVEK----PGLI 113
V+MGP D LR L GA R V + AG T + +++ E+ + P ++
Sbjct: 59 VTMGPKMAEDALRKALTFGAHRAVLLTDRHFAGSDTLATSFALAQAIAEIGETFGTPDVV 118
Query: 114 ILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVV-LDKEKQLAMVEREVDGGLETLELDL 172
GKQ ID D Q G +A L Q T+ +K++ +D + VER +GG + L L
Sbjct: 119 FTGKQTIDGDTAQVGPGIAKRLDLQQLTYVAKILSIDAASREITVERRAEGGSQILRTGL 178
Query: 173 PAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNV 211
P ++T + R L + ++A + K++ + +
Sbjct: 179 PCLVTMLDGADAIRRGRLDDALRAARTKVVKWSAADAGI 217
>sp|Q05559|FIXA_RHILP Protein FixA OS=Rhizobium leguminosarum bv. phaseoli GN=fixA PE=3
SV=1
Length = 279
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
M I++ IK+V D A +IRV + V +NP+ ALEE G EV
Sbjct: 1 MHIVICIKQVPDSA-QIRVDPVTNTIMRQGVPTIINPYDLFALEERSSCASHG--GEVTV 57
Query: 61 VSMGPAQCVDTLRTGLAMGADRGV-----HVEAAGQL---YPLT--VAKILKSLVEVEKP 110
++MGP D LR L + ADR V H + L + L+ +AKI ++ P
Sbjct: 58 LTMGPPMAEDALRKALTV-ADRAVLLTERHFAGSDTLATSFALSRAIAKIGEAF---GTP 113
Query: 111 GLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVV-LDKEKQLAMVEREVDGGLETLE 169
++ KQ ID D Q G +A L Q T+ +K+V +D + VER +GG +TL
Sbjct: 114 DIVFTAKQTIDGDTAQVGPGIAKRLDLLQLTYVAKIVSVDINGREITVERRSEGGTQTLM 173
Query: 170 LDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVD--VKSDLE-----VIQV 222
LP +IT N+ R +L + ++A I K+ + ++ K L V +V
Sbjct: 174 SKLPCLITMLEGTNEIRRGSLDDALRAARSQIVKWNAADAGIEDLTKCGLRGSPTVVKRV 233
Query: 223 TEPPKR 228
PP+R
Sbjct: 234 FAPPER 239
>sp|P26482|FIXA_AZOC5 Protein FixA OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=fixA PE=3 SV=1
Length = 281
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 12/221 (5%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
M I+V IK+V D A +IRV + V +NP+ ALE AL +++ EV
Sbjct: 1 MHIVVCIKQVPDSA-QIRVHPVTNTIMRQGVPTIINPYDLFALEAALALRDQH-GGEVTV 58
Query: 61 VSMGPAQCVDTLRTGLAMGADRGVHV--------EAAGQLYPLTVAKILKSLVEVEKPGL 112
++MGP D+LR L GADR V + + Y L A + K P +
Sbjct: 59 LTMGPPSAEDSLRKALTFGADRAVLLTDRFFAGSDTLATTYALATA-VRKIGETFGAPDI 117
Query: 113 IILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVV-LDKEKQLAMVEREVDGGLETLELD 171
+ GKQ ID D Q G +A L Q T+ +K+ +D + VER +GG++ L+
Sbjct: 118 VFTGKQTIDGDTAQVGPGIAKRLGLLQLTYVAKIANVDLAGRSIQVERRSEGGVQVLQTR 177
Query: 172 LPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVD 212
LP +IT N+ R + + ++A + ++ ++ V+
Sbjct: 178 LPCLITMLEATNEIRRGAMADALRAARAEVVIWSAKDAGVE 218
>sp|Q0TLU8|FIXA_ECOL5 Protein FixA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=fixA PE=3 SV=1
Length = 256
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 109/233 (46%), Gaps = 6/233 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+ K V D I V + ++ + ++ + A+E A ++K+ + ++V A
Sbjct: 1 MKIITCYKCVPDEQ-DIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAVEAQVTA 59
Query: 61 VSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
+S+G + + L+ G D + V + Q P A +L + + LI+ G
Sbjct: 60 LSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASVLAAAAQKAGFDLILCG 119
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
+ D Q G +V +L+ P SK++ L VERE++ ETL + LPAV+
Sbjct: 120 DGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTL-TVERELEDETETLSIPLPAVV 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 229
+N P+ ++ I+ A KP++ ++ ++ + ++ QV P +R+
Sbjct: 179 AVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231
>sp|B7MNP8|FIXA_ECO81 Protein FixA OS=Escherichia coli O81 (strain ED1a) GN=fixA PE=3
SV=1
Length = 256
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 109/233 (46%), Gaps = 6/233 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+ K V D I V + ++ + ++ + A+E A ++K+ + ++V A
Sbjct: 1 MKIITCYKCVPDEQ-DIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAVEAQVTA 59
Query: 61 VSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
+S+G + + L+ G D + V + Q P A +L + + LI+ G
Sbjct: 60 LSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASVLAAAAQKAGFDLILCG 119
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
+ D Q G +V +L+ P SK++ L VERE++ ETL + LPAV+
Sbjct: 120 DGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTL-TVERELEDETETLSIPLPAVV 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 229
+N P+ ++ I+ A KP++ ++ ++ + ++ QV P +R+
Sbjct: 179 AVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231
>sp|Q8FLA3|FIXA_ECOL6 Protein FixA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=fixA PE=3 SV=2
Length = 256
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 108/233 (46%), Gaps = 6/233 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+ K V D I V + ++ + ++ + A+E A ++K+ ++V A
Sbjct: 1 MKIITCYKCVPDEQ-DIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTA 59
Query: 61 VSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
+S+G + + L+ G D + V + Q P A +L + + LI+ G
Sbjct: 60 LSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASVLAAAAQKAGFDLILCG 119
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
+ D Q G +V +L+ P SK++ L VERE++ ETL + LPAV+
Sbjct: 120 DGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTL-TVERELEDETETLSIPLPAVV 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 229
+N P+ ++ I+ A KP++ ++ ++ + ++ QV P +R+
Sbjct: 179 AVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231
>sp|B7MAG4|FIXA_ECO45 Protein FixA OS=Escherichia coli O45:K1 (strain S88 / ExPEC)
GN=fixA PE=3 SV=1
Length = 256
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 108/233 (46%), Gaps = 6/233 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+ K V D I V + ++ + ++ + A+E A ++K+ ++V A
Sbjct: 1 MKIITCYKCVPDEQ-DIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTA 59
Query: 61 VSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
+S+G + + L+ G D + V + Q P A +L + + LI+ G
Sbjct: 60 LSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASVLAAAAQKAGFDLILCG 119
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
+ D Q G +V +L+ P SK++ L VERE++ ETL + LPAV+
Sbjct: 120 DGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTL-TVERELEDETETLSIPLPAVV 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 229
+N P+ ++ I+ A KP++ ++ ++ + ++ QV P +R+
Sbjct: 179 AVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231
>sp|B7UI87|FIXA_ECO27 Protein FixA OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC)
GN=fixA PE=3 SV=1
Length = 256
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 108/233 (46%), Gaps = 6/233 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+ K V D I V + ++ + ++ + A+E A ++K+ ++V A
Sbjct: 1 MKIITCYKCVPDEQ-DIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTA 59
Query: 61 VSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
+S+G + + L+ G D + V + Q P A +L + + LI+ G
Sbjct: 60 LSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASVLAAAAQKAGFDLILCG 119
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
+ D Q G +V +L+ P SK++ L VERE++ ETL + LPAV+
Sbjct: 120 DGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTL-TVERELEDETETLSIPLPAVV 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 229
+N P+ ++ I+ A KP++ ++ ++ + ++ QV P +R+
Sbjct: 179 AVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231
>sp|B5RGA8|FIXA_SALG2 Protein FixA OS=Salmonella gallinarum (strain 287/91 / NCTC 13346)
GN=fixA PE=3 SV=1
Length = 256
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 5/192 (2%)
Query: 42 ALEEALRIKESGLASEVVAVSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTV 97
A+E A ++K+ ++VVA+S+G + + L+ G D + V + Q P
Sbjct: 41 AIEAACQLKQQLGDAQVVAMSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQHT 100
Query: 98 AKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMV 157
A L + + L+I G + D Q G +V L+ P SK++ + L V
Sbjct: 101 ATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSKILSLTDSTLT-V 159
Query: 158 EREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDL 217
ERE++ +ETL + LPAVI +N P+ ++ I+ A KP++ ++P ++ ++ S
Sbjct: 160 ERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSPADIGLNSVSAY 219
Query: 218 EVIQVTEPPKRK 229
QV P +R+
Sbjct: 220 STQQVAAPKQRE 231
>sp|B5FHH0|FIXA_SALDC Protein FixA OS=Salmonella dublin (strain CT_02021853) GN=fixA PE=3
SV=1
Length = 256
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 5/192 (2%)
Query: 42 ALEEALRIKESGLASEVVAVSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTV 97
A+E A ++K+ ++VVA+S+G + + L+ G D + V + Q P
Sbjct: 41 AIEAACQLKQQLGDAQVVAMSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQHT 100
Query: 98 AKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMV 157
A L + + L+I G + D Q G +V L+ P SK++ + L V
Sbjct: 101 ATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSKILSLTDSTLT-V 159
Query: 158 EREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDL 217
ERE++ +ETL + LPAVI +N P+ ++ I+ A KP++ ++P ++ ++ S
Sbjct: 160 ERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSPADIGLNSVSAY 219
Query: 218 EVIQVTEPPKRK 229
QV P +R+
Sbjct: 220 STQQVAAPKQRE 231
>sp|P60566|FIXA_ECOLI Protein FixA OS=Escherichia coli (strain K12) GN=fixA PE=3 SV=1
Length = 256
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 6/233 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+ K V D I V + ++ + ++ + A+E A ++K+ ++V A
Sbjct: 1 MKIITCYKCVPDEQ-DIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTA 59
Query: 61 VSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
+S+G + + L+ G D + V + Q P A L + + LI+ G
Sbjct: 60 LSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCG 119
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
+ D Q G +V +L+ P SK++ L VERE++ ETL + LPAV+
Sbjct: 120 DGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTL-TVERELEDETETLSIPLPAVV 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 229
+N P+ ++ I+ A KP++ ++ ++ + ++ QV P +R+
Sbjct: 179 AVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231
>sp|B1IRD5|FIXA_ECOLC Protein FixA OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
Crooks) GN=fixA PE=3 SV=1
Length = 256
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 6/233 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+ K V D I V + ++ + ++ + A+E A ++K+ ++V A
Sbjct: 1 MKIITCYKCVPDEQ-DIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTA 59
Query: 61 VSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
+S+G + + L+ G D + V + Q P A L + + LI+ G
Sbjct: 60 LSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCG 119
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
+ D Q G +V +L+ P SK++ L VERE++ ETL + LPAV+
Sbjct: 120 DGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTL-TVERELEDETETLSIPLPAVV 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 229
+N P+ ++ I+ A KP++ ++ ++ + ++ QV P +R+
Sbjct: 179 AVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231
>sp|A7ZVZ3|FIXA_ECOHS Protein FixA OS=Escherichia coli O9:H4 (strain HS) GN=fixA PE=3
SV=1
Length = 256
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 6/233 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+ K V D I V + ++ + ++ + A+E A ++K+ ++V A
Sbjct: 1 MKIITCYKCVPDEQ-DIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTA 59
Query: 61 VSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
+S+G + + L+ G D + V + Q P A L + + LI+ G
Sbjct: 60 LSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCG 119
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
+ D Q G +V +L+ P SK++ L VERE++ ETL + LPAV+
Sbjct: 120 DGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTL-TVERELEDETETLSIPLPAVV 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 229
+N P+ ++ I+ A KP++ ++ ++ + ++ QV P +R+
Sbjct: 179 AVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231
>sp|B1XBG6|FIXA_ECODH Protein FixA OS=Escherichia coli (strain K12 / DH10B) GN=fixA PE=3
SV=1
Length = 256
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 6/233 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+ K V D I V + ++ + ++ + A+E A ++K+ ++V A
Sbjct: 1 MKIITCYKCVPDEQ-DIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTA 59
Query: 61 VSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
+S+G + + L+ G D + V + Q P A L + + LI+ G
Sbjct: 60 LSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCG 119
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
+ D Q G +V +L+ P SK++ L VERE++ ETL + LPAV+
Sbjct: 120 DGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTL-TVERELEDETETLSIPLPAVV 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 229
+N P+ ++ I+ A KP++ ++ ++ + ++ QV P +R+
Sbjct: 179 AVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231
>sp|C4ZPW7|FIXA_ECOBW Protein FixA OS=Escherichia coli (strain K12 / MC4100 / BW2952)
GN=fixA PE=3 SV=1
Length = 256
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 6/233 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+ K V D I V + ++ + ++ + A+E A ++K+ ++V A
Sbjct: 1 MKIITCYKCVPDEQ-DIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTA 59
Query: 61 VSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
+S+G + + L+ G D + V + Q P A L + + LI+ G
Sbjct: 60 LSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCG 119
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
+ D Q G +V +L+ P SK++ L VERE++ ETL + LPAV+
Sbjct: 120 DGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTL-TVERELEDETETLSIPLPAVV 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 229
+N P+ ++ I+ A KP++ ++ ++ + ++ QV P +R+
Sbjct: 179 AVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231
>sp|P60567|FIXA_ECO57 Protein FixA OS=Escherichia coli O157:H7 GN=fixA PE=3 SV=1
Length = 256
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 6/233 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+ K V D I V + ++ + ++ + A+E A ++K+ ++V A
Sbjct: 1 MKIITCYKCVPDEQ-DIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTA 59
Query: 61 VSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
+S+G + + L+ G D + V + Q P A L + + LI+ G
Sbjct: 60 LSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCG 119
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
+ D Q G +V +L+ P SK++ L VERE++ ETL + LPAV+
Sbjct: 120 DGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTL-TVERELEDETETLSIPLPAVV 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 229
+N P+ ++ I+ A KP++ ++ ++ + ++ QV P +R+
Sbjct: 179 AVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231
>sp|A7ZHD4|FIXA_ECO24 Protein FixA OS=Escherichia coli O139:H28 (strain E24377A / ETEC)
GN=fixA PE=3 SV=1
Length = 256
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 6/233 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+ K V D I V + ++ + ++ + A+E A ++K+ ++V A
Sbjct: 1 MKIITCYKCVPDEQ-DIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTA 59
Query: 61 VSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
+S+G + + L+ G D + V + Q P A L + + LI+ G
Sbjct: 60 LSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCG 119
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
+ D Q G +V +L+ P SK++ L VERE++ ETL + LPAV+
Sbjct: 120 DGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTL-TVERELEDETETLSIPLPAVV 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 229
+N P+ ++ I+ A KP++ ++ ++ + ++ QV P +R+
Sbjct: 179 AVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231
>sp|B4T6K2|FIXA_SALNS Protein FixA OS=Salmonella newport (strain SL254) GN=fixA PE=3 SV=1
Length = 256
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Query: 42 ALEEALRIKESGLASEVVAVSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTV 97
A+E A ++K+ ++VVA+S+G + + L+ G D + V + Q P
Sbjct: 41 AIEAACQLKQQLGDAQVVAMSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQT 100
Query: 98 AKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMV 157
A L + + L+I G + D Q G +V L+ P SK++ + L V
Sbjct: 101 ASALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSKILSLTDSTLT-V 159
Query: 158 EREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDL 217
ERE++ +ETL + LPAVI +N P+ ++ I+ A KP++ ++P ++ ++
Sbjct: 160 ERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSPADIGLNSVPAY 219
Query: 218 EVIQVTEPPKRK 229
QV P +R+
Sbjct: 220 SAQQVAAPKQRE 231
>sp|B5F756|FIXA_SALA4 Protein FixA OS=Salmonella agona (strain SL483) GN=fixA PE=3 SV=1
Length = 256
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Query: 42 ALEEALRIKESGLASEVVAVSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTV 97
A+E A ++K+ ++VVA+S+G + + L+ G D + V + Q P
Sbjct: 41 AIEAACQLKQQLGDAQVVAMSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQT 100
Query: 98 AKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMV 157
A L + + L+I G + D Q G +V L+ P SK++ + L V
Sbjct: 101 ASALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSKILSLTDSTLT-V 159
Query: 158 EREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDL 217
ERE++ +ETL + LPAVI +N P+ ++ I+ A KP++ ++P ++ ++
Sbjct: 160 ERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSPADIGLNSVPAY 219
Query: 218 EVIQVTEPPKRK 229
QV P +R+
Sbjct: 220 SAQQVAAPKQRE 231
>sp|B1LFX5|FIXA_ECOSM Protein FixA OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=fixA
PE=3 SV=1
Length = 256
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 6/233 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+ K V D I V + ++ + ++ + A+E A ++K+ +V A
Sbjct: 1 MKIITCYKCVPDEQ-DIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEGQVTA 59
Query: 61 VSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
+S+G + + L+ G D + V + Q P A L + + LI+ G
Sbjct: 60 LSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCG 119
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
+ D Q G +V +L+ P SK++ L VERE++ ETL + LPAV+
Sbjct: 120 DGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTL-TVERELEDETETLSIPLPAVV 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 229
+N P+ ++ I+ A KP++ ++ ++ + ++ QV P +R+
Sbjct: 179 AVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231
>sp|B7NHE5|FIXA_ECO7I Protein FixA OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC)
GN=fixA PE=3 SV=1
Length = 256
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 6/233 (2%)
Query: 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVA 60
MKI+ K V D I V + ++ + ++ + A+E A ++K+ +V A
Sbjct: 1 MKIITCYKCVPDEQ-DIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEGQVTA 59
Query: 61 VSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILG 116
+S+G + + L+ G D + V + Q P A L + + LI+ G
Sbjct: 60 LSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCG 119
Query: 117 KQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVI 176
+ D Q G +V +L+ P SK++ L VERE++ ETL + LPAV+
Sbjct: 120 DGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTL-TVERELEDETETLSIPLPAVV 178
Query: 177 TTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 229
+N P+ ++ I+ A KP++ ++ ++ + ++ QV P +R+
Sbjct: 179 AVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRE 231
>sp|Q8Z9L0|FIXA_SALTI Protein FixA OS=Salmonella typhi GN=fixA PE=3 SV=1
Length = 256
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Query: 42 ALEEALRIKESGLASEVVAVSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTV 97
A+E A ++K+ ++VVA+S+G + + L+ G D + V + Q P
Sbjct: 41 AIEAACQLKQQLGDAQVVAMSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQHT 100
Query: 98 AKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMV 157
A L + + L+I G + D Q G +V L+ P SK++ + L V
Sbjct: 101 ATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSKILSLTDSTLT-V 159
Query: 158 EREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDL 217
ERE++ +ETL + LPAVI +N P+ ++ I+ A KP++ ++P ++ ++
Sbjct: 160 ERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSPADIGLNSVPAY 219
Query: 218 EVIQVTEPPKRK 229
QV P +R+
Sbjct: 220 STQQVAAPKQRE 231
>sp|B5BL59|FIXA_SALPK Protein FixA OS=Salmonella paratyphi A (strain AKU_12601) GN=fixA
PE=3 SV=1
Length = 256
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Query: 42 ALEEALRIKESGLASEVVAVSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTV 97
A+E A ++K+ ++VVA+S+G + + L+ G D + V + Q P
Sbjct: 41 AIEAACQLKQQLGDAQVVAMSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQHT 100
Query: 98 AKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMV 157
A L + + L+I G + D Q G +V L+ P SK++ + L V
Sbjct: 101 ATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSKILSLTDSTLT-V 159
Query: 158 EREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDL 217
ERE++ +ETL + LPAVI +N P+ ++ I+ A KP++ ++P ++ ++
Sbjct: 160 ERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSPADIGLNSVPAY 219
Query: 218 EVIQVTEPPKRK 229
QV P +R+
Sbjct: 220 STQQVAAPKQRE 231
>sp|Q5PIN4|FIXA_SALPA Protein FixA OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42)
GN=fixA PE=3 SV=1
Length = 256
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Query: 42 ALEEALRIKESGLASEVVAVSMGPAQCVDT--LRTGLAMGADRGVHV--EAAGQLYPLTV 97
A+E A ++K+ ++VVA+S+G + + L+ G D + V + Q P
Sbjct: 41 AIEAACQLKQQLGDAQVVAMSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQHT 100
Query: 98 AKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMV 157
A L + + L+I G + D Q G +V L+ P SK++ + L V
Sbjct: 101 ATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSKILSLTDSTLT-V 159
Query: 158 EREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDL 217
ERE++ +ETL + LPAVI +N P+ ++ I+ A KP++ ++P ++ ++
Sbjct: 160 ERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSPADIGLNSVPAY 219
Query: 218 EVIQVTEPPKRK 229
QV P +R+
Sbjct: 220 STQQVAAPKQRE 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,529,931
Number of Sequences: 539616
Number of extensions: 3368873
Number of successful extensions: 10678
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 10514
Number of HSP's gapped (non-prelim): 73
length of query: 251
length of database: 191,569,459
effective HSP length: 115
effective length of query: 136
effective length of database: 129,513,619
effective search space: 17613852184
effective search space used: 17613852184
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)