Query 025565
Match_columns 251
No_of_seqs 194 out of 1464
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 12:54:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025565.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025565hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1efv_B Electron transfer flavo 100.0 1E-64 3.5E-69 446.1 26.8 246 1-250 4-255 (255)
2 1efp_B ETF, protein (electron 100.0 1.7E-64 5.9E-69 444.2 27.0 246 1-251 1-252 (252)
3 1o97_C Electron transferring f 100.0 5.8E-62 2E-66 430.8 24.4 244 1-248 1-262 (264)
4 3ih5_A Electron transfer flavo 100.0 7.9E-30 2.7E-34 219.2 13.1 164 32-207 14-194 (217)
5 1o97_D Electron transferring f 100.0 5E-28 1.7E-32 218.9 13.7 163 29-207 8-177 (320)
6 1efv_A Electron transfer flavo 99.9 3.6E-26 1.2E-30 206.4 13.9 155 32-206 12-172 (315)
7 1efp_A ETF, protein (electron 99.9 7.2E-25 2.5E-29 197.2 17.3 154 29-206 7-167 (307)
8 3fet_A Electron transfer flavo 99.9 2.8E-23 9.6E-28 171.4 13.9 148 38-221 15-164 (166)
9 3hgm_A Universal stress protei 96.5 0.025 8.7E-07 43.0 10.5 99 35-140 11-145 (147)
10 3dlo_A Universal stress protei 96.1 0.068 2.3E-06 41.7 11.0 100 36-140 35-152 (155)
11 3fg9_A Protein of universal st 95.9 0.045 1.6E-06 42.3 9.1 100 35-140 26-153 (156)
12 2z08_A Universal stress protei 95.8 0.056 1.9E-06 40.8 9.0 99 35-140 11-134 (137)
13 3s3t_A Nucleotide-binding prot 95.7 0.053 1.8E-06 41.1 8.7 99 35-140 14-143 (146)
14 3idf_A USP-like protein; unive 95.6 0.1 3.6E-06 39.1 9.8 97 35-140 10-135 (138)
15 3tnj_A Universal stress protei 95.3 0.12 4.2E-06 39.3 9.4 97 36-140 16-143 (150)
16 3fdx_A Putative filament prote 95.1 0.15 5E-06 38.5 9.3 93 39-140 16-140 (143)
17 1mjh_A Protein (ATP-binding do 94.8 0.34 1.1E-05 37.3 10.8 99 35-140 14-155 (162)
18 1jmv_A USPA, universal stress 94.4 0.17 5.9E-06 38.0 7.9 78 36-122 12-114 (141)
19 2dum_A Hypothetical protein PH 94.3 0.31 1.1E-05 38.0 9.6 99 35-140 14-152 (170)
20 3loq_A Universal stress protei 94.2 0.38 1.3E-05 41.1 10.6 99 35-140 179-286 (294)
21 1tq8_A Hypothetical protein RV 93.9 0.73 2.5E-05 36.0 11.0 99 34-140 25-154 (163)
22 3mt0_A Uncharacterized protein 93.7 0.33 1.1E-05 41.4 9.4 99 36-140 17-124 (290)
23 1q77_A Hypothetical protein AQ 92.8 0.4 1.4E-05 35.8 7.5 92 36-140 14-135 (138)
24 2gm3_A Unknown protein; AT3G01 91.4 1.9 6.5E-05 33.5 10.3 99 36-140 24-159 (175)
25 3mt0_A Uncharacterized protein 91.2 0.62 2.1E-05 39.7 7.7 93 39-139 154-271 (290)
26 3olq_A Universal stress protei 91.1 1.2 4.1E-05 38.1 9.5 98 36-140 17-146 (319)
27 3cis_A Uncharacterized protein 90.5 3.2 0.00011 35.5 11.7 98 34-140 179-302 (309)
28 3rg8_A Phosphoribosylaminoimid 90.4 2.5 8.4E-05 33.8 9.9 78 58-140 4-85 (159)
29 4grd_A N5-CAIR mutase, phospho 88.5 4.1 0.00014 32.9 10.0 78 57-140 13-94 (173)
30 3ab8_A Putative uncharacterize 88.5 3.3 0.00011 34.4 10.0 100 32-140 160-265 (268)
31 2ixd_A LMBE-related protein; h 88.5 3.1 0.00011 35.2 9.8 81 35-118 11-106 (242)
32 4b4k_A N5-carboxyaminoimidazol 88.0 3.1 0.00011 33.9 8.9 77 58-140 24-104 (181)
33 3ab8_A Putative uncharacterize 87.7 3.6 0.00012 34.1 9.8 96 36-140 10-145 (268)
34 1uan_A Hypothetical protein TT 87.2 3.1 0.00011 34.7 9.0 50 69-118 53-104 (227)
35 3u7q_B Nitrogenase molybdenum- 85.7 2.6 9E-05 39.8 8.6 36 100-140 429-467 (523)
36 3olq_A Universal stress protei 85.7 3.2 0.00011 35.4 8.5 88 38-132 175-289 (319)
37 3lp6_A Phosphoribosylaminoimid 85.7 9.4 0.00032 30.8 10.6 77 58-140 9-89 (174)
38 3cis_A Uncharacterized protein 84.4 5.1 0.00017 34.1 9.2 97 35-140 28-157 (309)
39 3trh_A Phosphoribosylaminoimid 84.2 8.4 0.00029 31.0 9.6 77 58-140 8-88 (169)
40 3loq_A Universal stress protei 83.7 1 3.5E-05 38.3 4.3 98 35-140 31-158 (294)
41 3ors_A N5-carboxyaminoimidazol 82.6 8 0.00027 30.9 8.8 76 59-140 6-85 (163)
42 1u11_A PURE (N5-carboxyaminoim 81.6 11 0.00038 30.6 9.4 77 58-140 23-103 (182)
43 1o4v_A Phosphoribosylaminoimid 81.1 11 0.00038 30.7 9.3 78 57-140 14-95 (183)
44 2xdq_B Light-independent proto 80.5 7.7 0.00026 36.3 9.5 32 100-140 363-394 (511)
45 3ble_A Citramalate synthase fr 80.4 15 0.00051 32.5 10.9 90 42-134 138-235 (337)
46 3oow_A Phosphoribosylaminoimid 79.7 11 0.00037 30.2 8.6 77 58-140 7-87 (166)
47 1q74_A 1D-MYO-inosityl 2-aceta 79.6 9.9 0.00034 33.1 9.3 47 69-115 70-135 (303)
48 1xmp_A PURE, phosphoribosylami 78.6 11 0.00037 30.3 8.4 77 58-140 13-93 (170)
49 3kuu_A Phosphoribosylaminoimid 78.6 11 0.00036 30.5 8.3 77 58-140 14-94 (174)
50 2h31_A Multifunctional protein 77.9 16 0.00056 33.6 10.5 78 57-140 266-348 (425)
51 4fs3_A Enoyl-[acyl-carrier-pro 76.2 13 0.00044 31.0 8.8 72 42-116 21-93 (256)
52 2ji4_A Phosphoribosyl pyrophos 75.8 14 0.00048 33.4 9.4 129 5-139 59-217 (379)
53 3pk0_A Short-chain dehydrogena 74.8 16 0.00054 30.4 9.0 73 42-117 23-96 (262)
54 2cw6_A Hydroxymethylglutaryl-C 74.4 29 0.00098 29.9 10.8 87 43-133 123-221 (298)
55 4fzr_A SSFS6; structural genom 74.2 14 0.00047 32.3 8.9 38 100-143 114-151 (398)
56 3rsc_A CALG2; TDP, enediyne, s 73.6 11 0.00039 32.9 8.2 88 43-143 38-147 (415)
57 3o38_A Short chain dehydrogena 73.4 22 0.00074 29.3 9.5 74 42-118 36-110 (266)
58 3rih_A Short chain dehydrogena 73.2 20 0.00067 30.6 9.4 75 40-117 52-127 (293)
59 3pdi_A Nitrogenase MOFE cofact 73.1 9.1 0.00031 35.6 7.6 32 100-140 392-423 (483)
60 1rqb_A Transcarboxylase 5S sub 73.0 25 0.00084 33.4 10.6 93 43-137 146-246 (539)
61 2q5c_A NTRC family transcripti 73.0 23 0.00077 28.7 9.2 29 103-140 136-164 (196)
62 3aek_B Light-independent proto 72.9 13 0.00044 35.0 8.7 81 41-140 291-371 (525)
63 3kbq_A Protein TA0487; structu 72.7 34 0.0012 27.2 10.6 79 57-142 5-95 (172)
64 2ywx_A Phosphoribosylaminoimid 72.0 26 0.00088 27.8 8.9 73 59-140 2-78 (157)
65 3vot_A L-amino acid ligase, BL 71.8 16 0.00055 32.7 8.8 75 54-139 27-101 (425)
66 3u7q_A Nitrogenase molybdenum- 71.6 17 0.00059 33.8 9.2 32 100-140 408-439 (492)
67 3ia7_A CALG4; glycosysltransfe 70.5 19 0.00065 31.1 8.8 89 42-143 21-131 (402)
68 4fn4_A Short chain dehydrogena 69.2 32 0.0011 29.0 9.7 71 43-117 21-92 (254)
69 3s5j_B Ribose-phosphate pyroph 69.2 28 0.00096 30.7 9.5 129 5-140 30-190 (326)
70 2pju_A Propionate catabolism o 69.1 35 0.0012 28.4 9.7 87 34-140 89-176 (225)
71 3tsa_A SPNG, NDP-rhamnosyltran 68.4 20 0.00069 31.0 8.5 40 98-143 103-142 (391)
72 1jlj_A Gephyrin; globular alph 67.8 44 0.0015 26.8 9.8 78 56-136 15-105 (189)
73 3dah_A Ribose-phosphate pyroph 66.6 49 0.0017 29.0 10.6 129 5-140 34-193 (319)
74 3p9x_A Phosphoribosylglycinami 66.3 45 0.0016 27.4 9.7 76 38-117 14-89 (211)
75 1nvm_A HOA, 4-hydroxy-2-oxoval 66.0 30 0.001 30.5 9.1 65 68-133 151-215 (345)
76 3ewb_X 2-isopropylmalate synth 65.7 65 0.0022 27.7 11.1 94 43-138 123-224 (293)
77 1mio_B Nitrogenase molybdenum 65.7 42 0.0014 30.7 10.4 81 41-140 323-407 (458)
78 2nx9_A Oxaloacetate decarboxyl 65.6 36 0.0012 31.5 9.9 88 43-134 129-223 (464)
79 3lf2_A Short chain oxidoreduct 65.0 41 0.0014 27.7 9.5 73 42-117 21-95 (265)
80 1xu9_A Corticosteroid 11-beta- 64.7 43 0.0015 27.8 9.7 73 41-116 40-113 (286)
81 1qgu_B Protein (nitrogenase mo 64.4 44 0.0015 31.2 10.4 32 100-140 425-463 (519)
82 3svt_A Short-chain type dehydr 63.6 47 0.0016 27.6 9.7 74 41-117 23-99 (281)
83 2iyf_A OLED, oleandomycin glyc 62.7 34 0.0012 30.0 9.0 88 42-143 24-132 (430)
84 1mkz_A Molybdenum cofactor bio 62.3 51 0.0018 25.9 9.1 77 57-138 12-98 (172)
85 3o26_A Salutaridine reductase; 61.8 36 0.0012 28.3 8.6 75 41-118 24-100 (311)
86 2pbq_A Molybdenum cofactor bio 61.8 58 0.002 25.7 9.6 76 57-136 7-95 (178)
87 4dry_A 3-oxoacyl-[acyl-carrier 61.3 34 0.0012 28.7 8.3 75 40-117 44-119 (281)
88 3pdi_B Nitrogenase MOFE cofact 60.9 42 0.0014 30.9 9.4 75 55-140 312-397 (458)
89 3op1_A Macrolide-efflux protei 60.8 38 0.0013 29.7 8.6 80 35-118 32-131 (308)
90 1xg5_A ARPG836; short chain de 60.1 72 0.0025 26.3 10.2 74 41-117 44-119 (279)
91 3av3_A Phosphoribosylglycinami 59.9 70 0.0024 26.1 10.1 61 55-117 30-90 (212)
92 2iya_A OLEI, oleandomycin glyc 58.9 29 0.001 30.5 7.8 88 42-143 29-137 (424)
93 1ydo_A HMG-COA lyase; TIM-barr 58.6 35 0.0012 29.6 8.1 91 43-137 124-227 (307)
94 1di6_A MOGA, molybdenum cofact 57.7 72 0.0025 25.8 9.4 75 57-136 5-93 (195)
95 2ae2_A Protein (tropinone redu 57.7 75 0.0026 25.9 9.8 72 42-117 22-95 (260)
96 1mio_A Nitrogenase molybdenum 57.7 63 0.0022 30.3 10.2 32 100-140 447-478 (533)
97 3ucx_A Short chain dehydrogena 57.5 75 0.0026 26.1 9.8 72 42-117 24-96 (264)
98 3h7a_A Short chain dehydrogena 57.2 76 0.0026 25.9 9.7 72 42-117 20-91 (252)
99 3qlj_A Short chain dehydrogena 56.0 87 0.003 26.6 10.2 74 40-117 38-122 (322)
100 3nyw_A Putative oxidoreductase 55.9 38 0.0013 27.8 7.6 73 42-117 20-95 (250)
101 3ijr_A Oxidoreductase, short c 55.5 77 0.0026 26.5 9.7 72 42-117 60-133 (291)
102 3dff_A Teicoplanin pseudoaglyc 55.3 66 0.0022 27.3 9.1 23 95-117 134-156 (273)
103 3i1j_A Oxidoreductase, short c 55.2 64 0.0022 25.9 8.9 76 41-118 26-103 (247)
104 4ds3_A Phosphoribosylglycinami 55.0 51 0.0017 27.1 8.0 77 37-117 18-94 (209)
105 3gaf_A 7-alpha-hydroxysteroid 54.6 81 0.0028 25.7 9.5 72 42-117 25-97 (256)
106 3auf_A Glycinamide ribonucleot 54.6 90 0.0031 25.8 9.7 61 55-117 49-109 (229)
107 4g81_D Putative hexonate dehyd 54.6 42 0.0014 28.3 7.7 71 43-117 23-94 (255)
108 1f0k_A MURG, UDP-N-acetylgluco 54.5 85 0.0029 26.4 9.9 93 39-141 20-124 (364)
109 3sju_A Keto reductase; short-c 54.4 78 0.0027 26.3 9.5 74 40-117 35-109 (279)
110 3rmj_A 2-isopropylmalate synth 54.4 1.1E+02 0.0036 27.4 10.7 71 68-139 159-232 (370)
111 3dfi_A Pseudoaglycone deacetyl 54.4 54 0.0018 27.7 8.4 23 95-117 131-153 (270)
112 1xhl_A Short-chain dehydrogena 54.0 64 0.0022 27.2 8.9 74 41-117 38-114 (297)
113 2pjk_A 178AA long hypothetical 53.6 72 0.0025 25.2 8.6 75 56-135 16-107 (178)
114 3tfo_A Putative 3-oxoacyl-(acy 53.5 79 0.0027 26.2 9.3 72 42-117 17-89 (264)
115 1meo_A Phosophoribosylglycinam 53.4 91 0.0031 25.4 10.0 75 39-117 13-87 (209)
116 3qvl_A Putative hydantoin race 53.4 29 0.00098 29.1 6.4 84 55-143 109-204 (245)
117 3v2h_A D-beta-hydroxybutyrate 52.9 68 0.0023 26.7 8.9 74 41-117 37-112 (281)
118 3i4f_A 3-oxoacyl-[acyl-carrier 52.8 55 0.0019 26.7 8.1 75 41-118 19-94 (264)
119 3iup_A Putative NADPH:quinone 52.7 26 0.00088 31.0 6.3 20 97-116 228-247 (379)
120 3okp_A GDP-mannose-dependent a 52.3 1.1E+02 0.0036 25.9 11.3 96 35-140 18-114 (394)
121 1xw8_A UPF0271 protein YBGL; N 52.3 17 0.00057 31.1 4.7 45 93-143 115-159 (252)
122 3f1l_A Uncharacterized oxidore 52.1 49 0.0017 27.0 7.7 74 42-117 25-100 (252)
123 2x5e_A UPF0271 protein PA4511; 52.1 11 0.00038 32.2 3.5 48 93-143 126-173 (252)
124 1xkq_A Short-chain reductase f 51.9 69 0.0024 26.5 8.7 73 42-117 19-94 (280)
125 2is8_A Molybdopterin biosynthe 51.8 55 0.0019 25.4 7.5 75 57-136 3-89 (164)
126 4fc7_A Peroxisomal 2,4-dienoyl 51.4 58 0.002 27.0 8.1 73 41-117 39-113 (277)
127 2b4q_A Rhamnolipids biosynthes 51.3 48 0.0016 27.7 7.6 73 40-117 40-113 (276)
128 3oig_A Enoyl-[acyl-carrier-pro 51.1 84 0.0029 25.6 9.0 72 42-117 22-95 (266)
129 1y5e_A Molybdenum cofactor bio 51.0 85 0.0029 24.4 8.6 76 56-136 14-99 (169)
130 3v8b_A Putative dehydrogenase, 50.4 81 0.0028 26.3 8.9 73 41-117 40-113 (283)
131 3r1i_A Short-chain type dehydr 50.4 1.1E+02 0.0036 25.5 9.6 72 42-117 45-117 (276)
132 3eod_A Protein HNR; response r 50.2 51 0.0017 23.1 6.7 63 39-107 63-126 (130)
133 3tjr_A Short chain dehydrogena 49.7 1.2E+02 0.0039 25.5 9.9 76 39-118 41-117 (301)
134 3pi7_A NADH oxidoreductase; gr 49.6 32 0.0011 29.8 6.3 33 54-87 163-196 (349)
135 1v6t_A Hypothetical UPF0271 pr 49.2 19 0.00065 30.8 4.5 44 94-143 121-164 (255)
136 3qiv_A Short-chain dehydrogena 49.2 1E+02 0.0035 24.8 9.4 73 41-117 21-94 (253)
137 4dmm_A 3-oxoacyl-[acyl-carrier 47.8 1.2E+02 0.004 25.0 9.5 73 41-117 40-114 (269)
138 4imr_A 3-oxoacyl-(acyl-carrier 47.8 1.1E+02 0.0037 25.3 9.3 72 42-117 46-117 (275)
139 3ftp_A 3-oxoacyl-[acyl-carrier 47.7 87 0.003 25.9 8.7 73 41-117 40-113 (270)
140 3lyl_A 3-oxoacyl-(acyl-carrier 47.5 1.1E+02 0.0037 24.5 9.3 72 42-117 18-90 (247)
141 3imf_A Short chain dehydrogena 47.4 89 0.003 25.5 8.6 72 42-117 19-91 (257)
142 2ftp_A Hydroxymethylglutaryl-C 47.4 1.3E+02 0.0046 25.6 10.1 75 43-118 126-212 (302)
143 3v2g_A 3-oxoacyl-[acyl-carrier 47.3 1.2E+02 0.0041 25.0 9.5 72 42-117 44-117 (271)
144 3ouz_A Biotin carboxylase; str 47.3 59 0.002 29.1 8.0 72 39-117 15-86 (446)
145 3lrt_A Ribose-phosphate pyroph 47.3 77 0.0026 27.2 8.3 126 6-140 28-180 (286)
146 2z1n_A Dehydrogenase; reductas 47.1 92 0.0031 25.3 8.6 72 42-117 20-93 (260)
147 4dad_A Putative pilus assembly 46.8 77 0.0026 22.7 8.6 64 39-108 79-142 (146)
148 2rhc_B Actinorhodin polyketide 46.7 1.2E+02 0.0042 24.9 9.7 73 41-117 34-107 (277)
149 2xed_A Putative maleate isomer 46.5 1.3E+02 0.0045 25.3 10.9 84 56-143 147-240 (273)
150 3h4t_A Glycosyltransferase GTF 46.2 44 0.0015 29.4 6.8 90 42-141 17-121 (404)
151 2ywr_A Phosphoribosylglycinami 45.8 1E+02 0.0034 25.2 8.5 60 56-117 29-88 (216)
152 3pgx_A Carveol dehydrogenase; 45.7 1.3E+02 0.0043 24.8 9.6 73 41-117 27-113 (280)
153 3iwt_A 178AA long hypothetical 45.6 1E+02 0.0036 23.9 9.2 64 56-121 16-94 (178)
154 2zat_A Dehydrogenase/reductase 45.6 1.2E+02 0.0041 24.5 9.6 73 41-117 26-99 (260)
155 3t7c_A Carveol dehydrogenase; 45.5 1.3E+02 0.0046 25.1 9.8 73 41-117 40-125 (299)
156 4iin_A 3-ketoacyl-acyl carrier 45.3 1.3E+02 0.0043 24.7 9.5 73 41-117 41-115 (271)
157 3oec_A Carveol dehydrogenase ( 45.2 1.4E+02 0.0048 25.2 9.8 73 41-117 58-143 (317)
158 3rkr_A Short chain oxidoreduct 45.1 1.2E+02 0.0042 24.6 9.4 75 39-117 39-114 (262)
159 1pl8_A Human sorbitol dehydrog 45.1 96 0.0033 26.8 8.8 32 54-87 171-203 (356)
160 1jkx_A GART;, phosphoribosylgl 45.1 1.2E+02 0.0042 24.6 9.7 75 39-117 13-87 (212)
161 3osu_A 3-oxoacyl-[acyl-carrier 44.8 1.2E+02 0.0041 24.4 9.6 72 42-117 17-90 (246)
162 2jah_A Clavulanic acid dehydro 44.7 1.2E+02 0.0042 24.4 9.8 72 42-117 20-92 (247)
163 3afn_B Carbonyl reductase; alp 44.6 1.2E+02 0.004 24.2 10.6 72 42-117 20-93 (258)
164 3ioy_A Short-chain dehydrogena 44.6 80 0.0028 26.9 8.1 75 41-118 20-96 (319)
165 2dfa_A Hypothetical UPF0271 pr 44.5 21 0.00072 30.4 4.1 44 94-143 121-164 (250)
166 3tqr_A Phosphoribosylglycinami 44.5 1.3E+02 0.0045 24.6 9.7 76 37-117 16-91 (215)
167 4egf_A L-xylulose reductase; s 44.4 68 0.0023 26.4 7.4 73 41-117 32-106 (266)
168 3eeg_A 2-isopropylmalate synth 43.9 91 0.0031 27.2 8.4 70 68-138 153-225 (325)
169 3is3_A 17BETA-hydroxysteroid d 43.6 1.3E+02 0.0046 24.5 9.3 73 41-117 30-104 (270)
170 4ibo_A Gluconate dehydrogenase 43.6 79 0.0027 26.2 7.7 73 41-117 38-111 (271)
171 2x0k_A Riboflavin biosynthesis 43.5 32 0.0011 30.4 5.4 63 35-98 27-107 (338)
172 3da8_A Probable 5'-phosphoribo 43.3 81 0.0028 25.9 7.5 76 36-117 22-97 (215)
173 3il6_A 3-oxoacyl-[acyl-carrier 43.3 56 0.0019 28.1 6.9 61 77-139 38-103 (321)
174 3q9s_A DNA-binding response re 43.1 1.3E+02 0.0045 24.3 9.0 63 39-108 93-155 (249)
175 3l77_A Short-chain alcohol deh 43.0 58 0.002 26.0 6.6 72 42-117 15-88 (235)
176 3lua_A Response regulator rece 42.7 87 0.003 22.2 7.9 63 39-107 63-127 (140)
177 3kto_A Response regulator rece 42.7 87 0.003 22.1 9.4 63 40-108 65-127 (136)
178 3oti_A CALG3; calicheamicin, T 42.6 22 0.00076 31.0 4.2 40 98-143 119-158 (398)
179 3qel_B Glutamate [NMDA] recept 42.5 36 0.0012 29.8 5.5 86 57-143 6-97 (364)
180 3o07_A Pyridoxine biosynthesis 42.5 17 0.00058 31.7 3.2 67 45-112 189-257 (291)
181 1geg_A Acetoin reductase; SDR 42.3 1.3E+02 0.0046 24.2 9.9 71 43-117 16-87 (256)
182 3oid_A Enoyl-[acyl-carrier-pro 42.3 1.4E+02 0.0047 24.3 9.2 72 42-117 17-90 (258)
183 3uog_A Alcohol dehydrogenase; 41.9 37 0.0013 29.6 5.6 31 54-87 189-220 (363)
184 1iv0_A Hypothetical protein; r 41.7 35 0.0012 24.5 4.4 46 93-139 35-88 (98)
185 3gdg_A Probable NADP-dependent 41.7 73 0.0025 25.9 7.1 73 42-118 35-110 (267)
186 3ixl_A Amdase, arylmalonate de 41.7 1.5E+02 0.005 24.5 11.8 85 56-143 118-212 (240)
187 4e7p_A Response regulator; DNA 41.5 97 0.0033 22.3 8.6 61 41-107 80-140 (150)
188 2x9g_A PTR1, pteridine reducta 41.5 1.5E+02 0.0051 24.5 10.1 73 41-117 35-114 (288)
189 3cxt_A Dehydrogenase with diff 41.4 1.5E+02 0.005 24.8 9.2 72 42-117 47-119 (291)
190 1vj0_A Alcohol dehydrogenase, 41.3 63 0.0022 28.3 7.0 17 71-87 211-227 (380)
191 3u5t_A 3-oxoacyl-[acyl-carrier 41.3 1.4E+02 0.0047 24.6 8.9 73 41-117 39-113 (267)
192 3m3h_A OPRT, oprtase, orotate 41.1 30 0.001 29.0 4.5 58 79-140 52-115 (234)
193 3ip1_A Alcohol dehydrogenase, 41.0 42 0.0014 29.8 5.8 32 54-87 213-245 (404)
194 2dgd_A 223AA long hypothetical 40.5 1.4E+02 0.0048 23.9 11.4 84 56-143 109-203 (223)
195 1zem_A Xylitol dehydrogenase; 40.3 1.5E+02 0.0051 24.1 9.7 72 42-117 20-92 (262)
196 4da9_A Short-chain dehydrogena 40.3 1.3E+02 0.0043 25.0 8.5 74 40-117 40-115 (280)
197 3bg3_A Pyruvate carboxylase, m 39.9 1.9E+02 0.0065 28.3 10.6 90 42-134 225-327 (718)
198 3s21_A 3-oxoacyl-[ACP] synthas 39.8 67 0.0023 27.8 6.9 61 77-138 53-118 (345)
199 2yjn_A ERYCIII, glycosyltransf 39.8 32 0.0011 30.6 4.9 37 101-143 136-172 (441)
200 2uvd_A 3-oxoacyl-(acyl-carrier 39.6 1.5E+02 0.005 23.8 9.7 72 42-117 17-90 (246)
201 3il3_A 3-oxoacyl-[acyl-carrier 39.3 1.1E+02 0.0038 26.3 8.2 61 77-138 43-108 (323)
202 2qq5_A DHRS1, dehydrogenase/re 39.3 1.5E+02 0.0052 23.9 9.4 72 42-117 18-91 (260)
203 2ph3_A 3-oxoacyl-[acyl carrier 39.1 1.4E+02 0.0048 23.5 9.0 72 43-117 15-88 (245)
204 3h78_A PQS biosynthetic enzyme 39.0 1.4E+02 0.0048 26.1 8.9 61 77-138 59-124 (359)
205 1ae1_A Tropinone reductase-I; 38.8 1.6E+02 0.0055 24.1 9.8 73 41-117 33-107 (273)
206 3otg_A CALG1; calicheamicin, T 38.8 31 0.0011 29.9 4.6 39 99-143 120-158 (412)
207 3sx2_A Putative 3-ketoacyl-(ac 38.6 1.6E+02 0.0055 24.0 9.3 74 41-118 25-111 (278)
208 3gve_A YFKN protein; alpha-bet 38.6 28 0.00096 30.7 4.2 50 68-119 196-251 (341)
209 1iy8_A Levodione reductase; ox 38.5 1.6E+02 0.0054 23.9 9.5 73 41-117 25-100 (267)
210 3awd_A GOX2181, putative polyo 38.5 1.5E+02 0.0052 23.7 9.6 73 41-117 25-98 (260)
211 3tsc_A Putative oxidoreductase 38.5 1.6E+02 0.0056 24.1 9.8 73 41-117 23-109 (277)
212 4e6p_A Probable sorbitol dehyd 38.4 1.3E+02 0.0045 24.3 8.3 70 42-118 21-91 (259)
213 1wma_A Carbonyl reductase [NAD 38.3 1.1E+02 0.0036 24.6 7.6 73 42-117 17-90 (276)
214 1gee_A Glucose 1-dehydrogenase 38.2 1.5E+02 0.0053 23.7 9.9 72 42-117 20-93 (261)
215 4e3z_A Putative oxidoreductase 38.1 1.6E+02 0.0056 23.9 10.2 76 39-118 36-113 (272)
216 1w6u_A 2,4-dienoyl-COA reducta 38.0 1.3E+02 0.0045 24.8 8.3 73 41-117 38-112 (302)
217 1yb1_A 17-beta-hydroxysteroid 38.0 1.6E+02 0.0056 24.0 9.8 74 40-117 42-116 (272)
218 1vdm_A Purine phosphoribosyltr 38.0 50 0.0017 24.8 5.1 43 94-140 11-53 (153)
219 1mxh_A Pteridine reductase 2; 37.9 1.6E+02 0.0054 24.0 8.7 73 41-117 23-102 (276)
220 3ot5_A UDP-N-acetylglucosamine 37.8 1E+02 0.0035 27.3 7.9 89 45-140 46-142 (403)
221 3dez_A OPRT, oprtase, orotate 37.6 38 0.0013 28.5 4.7 41 96-140 85-127 (243)
222 2qt7_A Receptor-type tyrosine- 37.1 26 0.00089 25.2 3.0 40 109-149 3-43 (91)
223 1vl8_A Gluconate 5-dehydrogena 37.1 1.7E+02 0.0058 23.9 9.1 74 40-117 32-107 (267)
224 3lyh_A Cobalamin (vitamin B12) 36.9 1E+02 0.0035 22.3 6.6 44 42-87 24-69 (126)
225 3hzh_A Chemotaxis response reg 36.5 1.2E+02 0.0042 22.0 7.2 57 42-104 98-154 (157)
226 4efi_A 3-oxoacyl-(acyl-carrier 36.5 94 0.0032 27.1 7.3 61 77-138 51-116 (354)
227 2p6p_A Glycosyl transferase; X 36.3 44 0.0015 28.7 5.1 38 100-143 98-135 (384)
228 1vl2_A Argininosuccinate synth 36.2 50 0.0017 30.3 5.5 72 47-120 32-131 (421)
229 3chv_A Prokaryotic domain of u 35.9 50 0.0017 28.5 5.3 52 66-118 34-89 (284)
230 3tox_A Short chain dehydrogena 35.9 93 0.0032 25.9 7.0 73 42-118 21-94 (280)
231 3f6c_A Positive transcription 35.8 93 0.0032 21.7 6.1 61 41-107 60-120 (134)
232 4gkb_A 3-oxoacyl-[acyl-carrier 35.8 1.9E+02 0.0065 24.0 9.2 70 43-117 21-91 (258)
233 3gwa_A 3-oxoacyl-(acyl-carrier 35.7 1.1E+02 0.0037 26.8 7.7 61 77-138 65-130 (365)
234 1zud_1 Adenylyltransferase THI 35.1 1.3E+02 0.0045 24.8 7.8 83 56-141 29-148 (251)
235 2qr3_A Two-component system re 35.0 1.1E+02 0.0037 21.4 6.4 60 42-107 67-126 (140)
236 3hl0_A Maleylacetate reductase 34.8 53 0.0018 29.0 5.4 104 94-203 72-180 (353)
237 3rxy_A NIF3 protein; structura 34.8 34 0.0012 29.6 3.9 56 59-122 198-255 (278)
238 3qek_A NMDA glutamate receptor 34.6 42 0.0014 29.0 4.7 60 83-143 39-101 (384)
239 1uuy_A CNX1, molybdopterin bio 34.6 1.6E+02 0.0054 22.7 8.8 44 93-137 55-99 (167)
240 3edm_A Short chain dehydrogena 34.5 1.8E+02 0.0063 23.5 8.8 72 42-117 21-94 (259)
241 1h2b_A Alcohol dehydrogenase; 34.5 50 0.0017 28.7 5.2 50 54-114 186-236 (359)
242 3cf4_G Acetyl-COA decarboxylas 34.3 16 0.00055 28.7 1.7 46 100-145 26-71 (170)
243 4dyv_A Short-chain dehydrogena 34.2 1.4E+02 0.0048 24.6 7.8 71 40-117 39-110 (272)
244 1gu7_A Enoyl-[acyl-carrier-pro 34.2 48 0.0016 28.7 5.0 16 71-86 184-199 (364)
245 4ewp_A 3-oxoacyl-[acyl-carrier 34.1 1.2E+02 0.0043 26.0 7.7 61 78-139 48-113 (350)
246 3a28_C L-2.3-butanediol dehydr 34.0 1.8E+02 0.0063 23.4 10.0 72 42-117 15-89 (258)
247 3gk3_A Acetoacetyl-COA reducta 33.8 1.9E+02 0.0065 23.5 9.4 76 39-118 35-112 (269)
248 2o23_A HADH2 protein; HSD17B10 33.5 1.8E+02 0.0063 23.2 9.3 70 41-117 24-94 (265)
249 1fmc_A 7 alpha-hydroxysteroid 33.5 1.8E+02 0.0061 23.1 9.6 73 41-117 23-96 (255)
250 3jzd_A Iron-containing alcohol 33.4 31 0.0011 30.6 3.6 104 94-203 74-182 (358)
251 2cfc_A 2-(R)-hydroxypropyl-COM 33.3 1.5E+02 0.0053 23.5 7.7 72 42-117 15-88 (250)
252 1ulz_A Pyruvate carboxylase N- 33.1 1.2E+02 0.0041 27.0 7.6 68 40-117 12-81 (451)
253 3tpc_A Short chain alcohol deh 33.0 1.5E+02 0.0052 23.9 7.8 69 42-117 20-89 (257)
254 3pxx_A Carveol dehydrogenase; 33.0 2E+02 0.0068 23.4 9.9 73 41-117 22-107 (287)
255 3gvc_A Oxidoreductase, probabl 32.8 1.5E+02 0.0053 24.5 7.9 68 43-117 43-111 (277)
256 1ja9_A 4HNR, 1,3,6,8-tetrahydr 32.8 1.9E+02 0.0065 23.2 8.7 74 40-117 32-107 (274)
257 3ai3_A NADPH-sorbose reductase 32.7 2E+02 0.0067 23.2 9.1 72 42-117 20-93 (263)
258 3nrc_A Enoyl-[acyl-carrier-pro 32.7 2.1E+02 0.007 23.5 8.8 70 42-117 41-111 (280)
259 1qb7_A APRT, adenine phosphori 32.6 55 0.0019 27.1 4.8 43 94-140 54-98 (236)
260 1a04_A Nitrate/nitrite respons 32.3 1.7E+02 0.0059 22.5 8.1 60 42-107 66-125 (215)
261 3rwb_A TPLDH, pyridoxal 4-dehy 32.2 1.6E+02 0.0054 23.7 7.7 69 42-117 19-88 (247)
262 3aek_A Light-independent proto 32.2 2.5E+02 0.0085 25.2 9.6 31 101-140 369-399 (437)
263 3krt_A Crotonyl COA reductase; 32.1 82 0.0028 28.4 6.4 6 109-114 314-319 (456)
264 3rui_A Ubiquitin-like modifier 32.0 1.3E+02 0.0044 26.6 7.4 94 56-157 35-180 (340)
265 2pd6_A Estradiol 17-beta-dehyd 31.9 1.2E+02 0.0041 24.4 6.9 74 41-117 19-100 (264)
266 3r3s_A Oxidoreductase; structu 31.7 2E+02 0.0067 23.9 8.4 74 41-118 61-137 (294)
267 2wns_A Orotate phosphoribosylt 31.7 48 0.0017 26.7 4.3 41 96-140 47-89 (205)
268 1e7w_A Pteridine reductase; di 31.6 1.9E+02 0.0065 23.9 8.3 72 42-117 22-113 (291)
269 4dfe_A 3-oxoacyl-[acyl-carrier 31.6 1.9E+02 0.0064 24.7 8.4 61 77-138 50-115 (333)
270 3two_A Mannitol dehydrogenase; 31.5 49 0.0017 28.5 4.6 49 54-114 176-225 (348)
271 3kht_A Response regulator; PSI 31.4 1.4E+02 0.0047 21.1 8.1 63 40-108 64-129 (144)
272 3jv7_A ADH-A; dehydrogenase, n 31.4 1E+02 0.0035 26.3 6.7 16 72-87 188-203 (345)
273 2fts_A Gephyrin; gephyrin, neu 31.4 2.5E+02 0.0084 25.3 9.4 103 32-139 157-277 (419)
274 1hxh_A 3BETA/17BETA-hydroxyste 31.3 1.8E+02 0.0061 23.4 7.9 69 42-117 19-88 (253)
275 4eg0_A D-alanine--D-alanine li 31.2 1.5E+02 0.005 25.0 7.6 34 106-140 62-95 (317)
276 4f06_A Extracellular ligand-bi 31.2 40 0.0014 29.1 3.9 52 88-142 51-102 (371)
277 3uve_A Carveol dehydrogenase ( 31.1 2.2E+02 0.0075 23.3 9.6 74 41-118 23-113 (286)
278 1vhx_A Putative holliday junct 31.1 13 0.00045 29.0 0.6 43 98-140 44-94 (150)
279 3dzc_A UDP-N-acetylglucosamine 31.0 1.9E+02 0.0064 25.4 8.5 91 44-140 43-139 (396)
280 2pn1_A Carbamoylphosphate synt 31.0 60 0.002 27.5 5.0 63 44-117 17-80 (331)
281 1tmy_A CHEY protein, TMY; chem 30.7 1.3E+02 0.0043 20.4 7.3 57 41-103 61-117 (120)
282 3fpc_A NADP-dependent alcohol 30.7 46 0.0016 28.8 4.2 32 54-87 166-198 (352)
283 1zk4_A R-specific alcohol dehy 30.6 1.7E+02 0.006 23.1 7.6 72 41-117 18-90 (251)
284 1dbw_A Transcriptional regulat 30.6 1.3E+02 0.0045 20.7 7.4 59 42-106 62-120 (126)
285 3gqv_A Enoyl reductase; medium 30.6 91 0.0031 27.2 6.2 15 71-86 181-195 (371)
286 1mjh_A Protein (ATP-binding do 30.5 1.6E+02 0.0054 21.6 7.6 74 42-117 84-159 (162)
287 1e3j_A NADP(H)-dependent ketos 30.5 1.2E+02 0.004 26.1 6.9 16 71-87 184-199 (352)
288 1h5q_A NADP-dependent mannitol 30.5 1.9E+02 0.0066 23.0 8.0 73 41-117 26-100 (265)
289 3eul_A Possible nitrate/nitrit 30.5 1.5E+02 0.0051 21.2 9.0 60 42-107 76-135 (152)
290 2c07_A 3-oxoacyl-(acyl-carrier 30.4 2.3E+02 0.0077 23.3 9.1 75 39-117 54-129 (285)
291 2qhx_A Pteridine reductase 1; 30.4 2E+02 0.0067 24.5 8.3 73 41-117 58-150 (328)
292 3hcn_A Ferrochelatase, mitocho 30.3 1.2E+02 0.004 27.0 6.9 30 59-88 97-126 (359)
293 1nu0_A Hypothetical protein YQ 30.3 72 0.0025 24.3 4.8 43 98-140 42-92 (138)
294 3gmi_A UPF0348 protein MJ0951; 30.3 80 0.0027 28.2 5.7 89 39-138 68-167 (357)
295 3l6e_A Oxidoreductase, short-c 30.2 2E+02 0.007 22.9 8.0 69 42-117 16-85 (235)
296 1ozh_A ALS, acetolactate synth 30.2 32 0.0011 32.3 3.3 52 93-145 193-244 (566)
297 4amg_A Snogd; transferase, pol 30.1 70 0.0024 27.4 5.4 36 101-142 120-155 (400)
298 3uko_A Alcohol dehydrogenase c 30.1 34 0.0011 30.0 3.3 33 54-87 193-225 (378)
299 3grk_A Enoyl-(acyl-carrier-pro 30.1 2.4E+02 0.0081 23.4 8.8 70 43-117 47-117 (293)
300 2fyw_A Conserved hypothetical 30.1 37 0.0013 28.8 3.4 65 59-135 180-245 (267)
301 3qwb_A Probable quinone oxidor 29.8 77 0.0026 27.0 5.5 50 70-135 164-213 (334)
302 2qxy_A Response regulator; reg 29.7 1.5E+02 0.005 20.9 8.3 63 40-108 60-122 (142)
303 1psw_A ADP-heptose LPS heptosy 29.5 1.2E+02 0.0042 25.5 6.7 88 41-139 16-104 (348)
304 3k31_A Enoyl-(acyl-carrier-pro 29.3 2.5E+02 0.0084 23.3 9.5 70 42-117 45-116 (296)
305 1ydn_A Hydroxymethylglutaryl-C 29.1 2.6E+02 0.0088 23.5 11.8 77 41-118 120-208 (295)
306 3n74_A 3-ketoacyl-(acyl-carrie 29.1 2.2E+02 0.0076 22.8 8.5 70 41-117 21-91 (261)
307 3hdg_A Uncharacterized protein 29.0 1.5E+02 0.005 20.7 6.6 61 42-108 66-126 (137)
308 1xq1_A Putative tropinone redu 28.8 2.3E+02 0.0077 22.8 9.5 74 40-117 25-100 (266)
309 4dqx_A Probable oxidoreductase 28.7 2.4E+02 0.0084 23.1 8.5 70 41-117 39-109 (277)
310 2w70_A Biotin carboxylase; lig 28.7 1.3E+02 0.0045 26.7 7.1 88 40-140 12-103 (449)
311 3h5l_A Putative branched-chain 28.3 1.4E+02 0.0047 25.9 7.1 57 84-143 58-114 (419)
312 1nmo_A Hypothetical protein YB 28.1 33 0.0011 28.8 2.7 68 59-137 168-236 (247)
313 3c6c_A 3-keto-5-aminohexanoate 28.1 69 0.0024 28.1 4.8 52 67-119 49-105 (316)
314 4hwg_A UDP-N-acetylglucosamine 28.0 55 0.0019 29.0 4.3 80 56-140 36-121 (385)
315 3fbg_A Putative arginate lyase 27.8 76 0.0026 27.3 5.2 17 70-87 166-182 (346)
316 3f6p_A Transcriptional regulat 27.7 1.5E+02 0.0051 20.3 7.5 60 40-106 59-118 (120)
317 3cz5_A Two-component response 27.6 1.7E+02 0.0058 20.9 7.0 59 42-106 66-124 (153)
318 4dim_A Phosphoribosylglycinami 27.5 1.7E+02 0.0058 25.4 7.5 79 42-138 19-97 (403)
319 1hdc_A 3-alpha, 20 beta-hydrox 27.5 1.7E+02 0.0058 23.6 7.1 69 42-117 18-87 (254)
320 2yzr_A Pyridoxal biosynthesis 27.5 42 0.0014 29.8 3.3 64 44-108 230-294 (330)
321 3jyn_A Quinone oxidoreductase; 27.4 60 0.002 27.7 4.3 51 70-136 156-206 (325)
322 1e3i_A Alcohol dehydrogenase, 27.4 78 0.0027 27.5 5.2 32 54-87 195-227 (376)
323 1x1t_A D(-)-3-hydroxybutyrate 27.3 2.4E+02 0.0083 22.6 9.1 72 42-117 17-91 (260)
324 2gdz_A NAD+-dependent 15-hydro 27.3 2.2E+02 0.0075 23.0 7.8 73 42-117 20-94 (267)
325 2hq1_A Glucose/ribitol dehydro 27.2 2.3E+02 0.0078 22.3 10.0 72 42-117 18-91 (247)
326 3tzq_B Short-chain type dehydr 27.2 2.5E+02 0.0087 22.8 9.4 70 42-118 24-94 (271)
327 3gl9_A Response regulator; bet 27.2 1.5E+02 0.0051 20.4 6.0 58 42-105 61-120 (122)
328 2vpq_A Acetyl-COA carboxylase; 27.2 1.3E+02 0.0043 26.8 6.7 67 40-117 11-81 (451)
329 2q2v_A Beta-D-hydroxybutyrate 27.0 2.4E+02 0.0083 22.6 9.3 70 42-117 17-87 (255)
330 4fgs_A Probable dehydrogenase 26.9 2.3E+02 0.0078 23.8 7.9 68 43-117 43-111 (273)
331 4eye_A Probable oxidoreductase 26.9 65 0.0022 27.7 4.5 18 69-87 174-191 (342)
332 3ezl_A Acetoacetyl-COA reducta 26.8 2.4E+02 0.0083 22.5 8.7 73 41-117 25-99 (256)
333 3gms_A Putative NADPH:quinone 26.8 49 0.0017 28.4 3.7 18 69-87 159-176 (340)
334 2y7e_A 3-keto-5-aminohexanoate 26.7 67 0.0023 27.7 4.4 54 65-119 33-90 (282)
335 1jw9_B Molybdopterin biosynthe 26.5 2.2E+02 0.0075 23.3 7.7 83 57-142 33-152 (249)
336 3pzy_A MOG; ssgcid, seattle st 26.4 2.2E+02 0.0076 21.9 7.5 72 57-135 9-92 (164)
337 3snk_A Response regulator CHEY 26.4 1E+02 0.0035 21.6 5.0 60 41-106 73-132 (135)
338 2bgk_A Rhizome secoisolaricire 26.3 2.1E+02 0.0071 23.1 7.5 72 41-117 28-100 (278)
339 1edo_A Beta-keto acyl carrier 26.3 2.4E+02 0.0081 22.2 9.3 72 42-117 14-87 (244)
340 2nwq_A Probable short-chain de 26.2 1.4E+02 0.0049 24.6 6.5 70 43-117 35-105 (272)
341 1yxm_A Pecra, peroxisomal tran 26.1 2.7E+02 0.0093 22.8 9.6 73 41-117 30-108 (303)
342 1uls_A Putative 3-oxoacyl-acyl 26.0 2E+02 0.007 23.0 7.3 66 42-117 18-85 (245)
343 1q6z_A BFD, BFDC, benzoylforma 26.0 44 0.0015 30.9 3.4 51 93-145 186-238 (528)
344 1jbe_A Chemotaxis protein CHEY 25.8 1.6E+02 0.0056 20.1 6.9 60 42-107 64-125 (128)
345 3vmm_A Alanine-anticapsin liga 25.7 51 0.0017 30.3 3.7 55 80-138 73-127 (474)
346 3kvo_A Hydroxysteroid dehydrog 25.7 3.2E+02 0.011 23.5 9.9 74 41-118 57-138 (346)
347 2g2c_A Putative molybdenum cof 25.6 2.3E+02 0.0078 21.8 7.2 74 57-136 7-96 (167)
348 3fwz_A Inner membrane protein 25.6 1.2E+02 0.004 22.2 5.3 28 103-137 112-139 (140)
349 4hti_A Receptor-type tyrosine- 25.5 79 0.0027 23.0 3.9 41 108-149 9-50 (99)
350 2h1v_A Ferrochelatase; rossman 25.4 1.7E+02 0.0059 25.1 7.0 30 59-88 84-113 (310)
351 2z1d_A Hydrogenase expression/ 25.4 1.7E+02 0.0059 26.2 6.9 88 43-139 76-192 (372)
352 1g0o_A Trihydroxynaphthalene r 25.4 2.8E+02 0.0095 22.7 9.8 74 41-118 41-116 (283)
353 2p10_A MLL9387 protein; putati 25.3 1.1E+02 0.0036 26.6 5.4 69 43-117 152-234 (286)
354 1zxx_A 6-phosphofructokinase; 25.2 3.4E+02 0.012 23.6 9.5 87 43-135 150-238 (319)
355 4a2c_A Galactitol-1-phosphate 25.2 1.2E+02 0.004 25.8 5.9 33 54-87 160-192 (346)
356 1y0b_A Xanthine phosphoribosyl 25.1 62 0.0021 25.6 3.7 41 96-140 40-80 (197)
357 1g2q_A Adenine phosphoribosylt 25.0 69 0.0023 25.2 4.0 42 95-140 41-86 (187)
358 3vdp_A Recombination protein R 24.9 1.5E+02 0.0053 24.4 6.1 70 34-109 99-178 (212)
359 3to5_A CHEY homolog; alpha(5)b 24.9 1.4E+02 0.0047 22.2 5.5 59 42-106 72-132 (134)
360 3jte_A Response regulator rece 24.9 1.8E+02 0.0062 20.4 9.5 60 42-107 64-123 (143)
361 4dup_A Quinone oxidoreductase; 24.8 1.1E+02 0.0037 26.4 5.6 18 69-87 182-199 (353)
362 3euo_A Type III pentaketide sy 24.8 1.7E+02 0.0057 25.8 6.9 31 109-140 102-132 (379)
363 1tq8_A Hypothetical protein RV 24.8 2.2E+02 0.0074 21.2 7.9 78 39-118 79-159 (163)
364 3no5_A Uncharacterized protein 24.8 1E+02 0.0035 26.4 5.3 53 66-119 30-86 (275)
365 3ak4_A NADH-dependent quinucli 24.7 1.5E+02 0.0051 24.0 6.2 68 42-117 25-94 (263)
366 1ijb_A VON willebrand factor; 24.7 1.5E+02 0.0051 23.1 6.0 43 43-87 136-179 (202)
367 3sc4_A Short chain dehydrogena 24.4 2.9E+02 0.01 22.6 9.3 72 42-117 22-101 (285)
368 3tov_A Glycosyl transferase fa 24.4 2.8E+02 0.0094 23.8 8.2 25 109-141 261-285 (349)
369 4h2g_A 5'-nucleotidase; dimer, 24.3 85 0.0029 29.3 5.1 46 69-120 198-243 (546)
370 2lpm_A Two-component response 24.3 64 0.0022 23.8 3.5 34 105-139 49-82 (123)
371 3grp_A 3-oxoacyl-(acyl carrier 24.2 2.9E+02 0.0099 22.5 8.6 70 41-117 39-109 (266)
372 3saj_A Glutamate receptor 1; r 24.1 77 0.0026 27.3 4.5 47 92-142 51-97 (384)
373 2qf7_A Pyruvate carboxylase pr 24.1 2.5E+02 0.0085 29.0 8.8 65 68-135 711-775 (1165)
374 3ivs_A Homocitrate synthase, m 24.0 4E+02 0.014 24.1 11.0 90 45-138 155-250 (423)
375 1cdo_A Alcohol dehydrogenase; 23.6 1.4E+02 0.0048 25.8 6.2 32 54-87 192-224 (374)
376 2xdq_A Light-independent proto 23.6 3.4E+02 0.012 24.3 9.0 31 101-140 386-416 (460)
377 2a4k_A 3-oxoacyl-[acyl carrier 23.5 1.7E+02 0.006 23.8 6.5 68 42-117 19-88 (263)
378 4eso_A Putative oxidoreductase 23.4 2.2E+02 0.0075 23.0 7.1 69 42-117 21-90 (255)
379 3s55_A Putative short-chain de 23.4 3E+02 0.01 22.4 9.6 72 42-117 23-107 (281)
380 4h1s_A 5'-nucleotidase; hydrol 23.3 86 0.0029 29.0 4.9 46 68-119 175-220 (530)
381 3va7_A KLLA0E08119P; carboxyla 23.3 1.5E+02 0.0051 30.9 7.0 72 39-117 40-111 (1236)
382 2d8a_A PH0655, probable L-thre 23.3 90 0.0031 26.8 4.7 19 69-87 181-199 (348)
383 3uhj_A Probable glycerol dehyd 23.1 81 0.0028 28.2 4.5 105 95-203 92-201 (387)
384 1hp1_A 5'-nucleotidase; metall 23.1 54 0.0019 30.2 3.4 51 69-119 172-229 (516)
385 1spx_A Short-chain reductase f 23.0 3E+02 0.01 22.2 8.0 73 42-117 19-94 (278)
386 3m6i_A L-arabinitol 4-dehydrog 22.9 1.7E+02 0.0058 25.1 6.5 32 54-87 179-211 (363)
387 1k92_A Argininosuccinate synth 22.8 4.2E+02 0.014 24.3 9.3 65 55-119 34-131 (455)
388 2r25_B Osmosensing histidine p 22.7 1.7E+02 0.0059 20.5 5.6 59 42-106 67-126 (133)
389 3snr_A Extracellular ligand-bi 22.7 1.4E+02 0.0047 24.9 5.8 50 91-143 51-100 (362)
390 3ju3_A Probable 2-oxoacid ferr 22.7 2.2E+02 0.0076 20.5 7.6 75 55-138 13-90 (118)
391 2wya_A Hydroxymethylglutaryl-C 22.6 57 0.002 29.8 3.4 40 109-148 75-114 (460)
392 2c92_A 6,7-dimethyl-8-ribityll 22.6 1.4E+02 0.0047 23.5 5.2 49 71-124 39-87 (160)
393 1kol_A Formaldehyde dehydrogen 22.4 1.5E+02 0.0051 25.9 6.1 32 54-87 185-217 (398)
394 2dzd_A Pyruvate carboxylase; b 22.4 1.4E+02 0.0047 26.7 6.0 70 41-117 17-87 (461)
395 3b2n_A Uncharacterized protein 22.4 2E+02 0.0069 20.0 8.8 59 42-106 64-122 (133)
396 4iiu_A 3-oxoacyl-[acyl-carrier 22.4 3.1E+02 0.011 22.1 9.4 75 39-117 36-112 (267)
397 3sg0_A Extracellular ligand-bi 22.3 1.5E+02 0.0051 24.9 6.0 70 71-143 46-120 (386)
398 3kzv_A Uncharacterized oxidore 22.1 3.1E+02 0.01 22.0 8.2 70 43-117 16-86 (254)
399 3kcq_A Phosphoribosylglycinami 22.1 3.2E+02 0.011 22.2 7.9 71 38-117 20-90 (215)
400 1dz3_A Stage 0 sporulation pro 22.1 1.6E+02 0.0053 20.4 5.2 59 43-107 64-123 (130)
401 4a0s_A Octenoyl-COA reductase/ 22.0 1.8E+02 0.0061 25.9 6.6 7 109-115 306-312 (447)
402 2ew8_A (S)-1-phenylethanol deh 21.9 3.1E+02 0.01 21.9 9.4 69 42-117 20-90 (249)
403 3lte_A Response regulator; str 21.9 1.6E+02 0.0055 20.3 5.2 59 42-106 65-124 (132)
404 2xvy_A Chelatase, putative; me 21.8 2E+02 0.0067 23.7 6.5 26 63-88 62-87 (269)
405 3rqi_A Response regulator prot 21.7 2.3E+02 0.0078 21.2 6.5 58 42-105 66-123 (184)
406 3hsy_A Glutamate receptor 2; l 21.7 1.5E+02 0.005 25.5 5.8 10 39-48 16-25 (376)
407 3qw4_B UMP synthase; N-termina 21.6 78 0.0027 29.1 4.1 69 68-140 259-343 (453)
408 4gj1_A 1-(5-phosphoribosyl)-5- 21.5 3.4E+02 0.011 22.2 8.0 43 68-115 86-128 (243)
409 3e1h_A PKSIIINC, putative unch 21.5 2E+02 0.0069 26.3 6.9 31 109-140 131-161 (465)
410 1vlj_A NADH-dependent butanol 21.5 80 0.0027 28.2 4.1 124 72-201 64-213 (407)
411 3ztv_A NAD nucleotidase, NADN; 21.4 1E+02 0.0036 28.9 5.1 45 69-119 184-228 (579)
412 3m1a_A Putative dehydrogenase; 21.3 3.3E+02 0.011 22.0 8.3 69 42-117 18-87 (281)
413 3tov_A Glycosyl transferase fa 21.3 1.4E+02 0.0049 25.7 5.7 87 43-139 26-113 (349)
414 4gnr_A ABC transporter substra 21.3 1.1E+02 0.0036 25.8 4.7 51 90-143 56-106 (353)
415 1p0f_A NADP-dependent alcohol 21.2 79 0.0027 27.5 4.0 32 54-87 191-223 (373)
416 2pd4_A Enoyl-[acyl-carrier-pro 21.1 3.3E+02 0.011 22.0 7.9 69 43-117 22-92 (275)
417 2bd0_A Sepiapterin reductase; 21.0 3E+02 0.01 21.5 9.7 71 43-117 16-94 (244)
418 1nff_A Putative oxidoreductase 20.9 3.3E+02 0.011 21.9 8.4 69 42-117 20-89 (260)
419 3jyf_A 2',3'-cyclic nucleotide 20.8 39 0.0013 29.7 1.8 52 68-119 190-244 (339)
420 3op4_A 3-oxoacyl-[acyl-carrier 20.8 3.2E+02 0.011 21.8 8.1 69 42-117 22-91 (248)
421 2gt1_A Lipopolysaccharide hept 20.8 3.6E+02 0.012 22.4 8.1 80 41-141 198-277 (326)
422 2qsj_A DNA-binding response re 20.7 1.4E+02 0.0047 21.4 4.8 63 40-108 63-125 (154)
423 3h1g_A Chemotaxis protein CHEY 20.7 2.1E+02 0.0071 19.7 5.7 59 42-106 66-126 (129)
424 1f8f_A Benzyl alcohol dehydrog 20.6 92 0.0032 27.0 4.3 52 54-116 190-242 (371)
425 3t6k_A Response regulator rece 20.6 1.9E+02 0.0064 20.3 5.5 60 42-107 63-124 (136)
426 2dy0_A APRT, adenine phosphori 20.5 55 0.0019 25.8 2.6 41 96-140 50-90 (190)
427 3okp_A GDP-mannose-dependent a 20.5 3.7E+02 0.013 22.3 9.1 89 41-141 215-308 (394)
428 1kjq_A GART 2, phosphoribosylg 20.4 3.7E+02 0.012 23.0 8.2 82 42-143 23-104 (391)
429 2jjm_A Glycosyl transferase, g 20.4 3.9E+02 0.013 22.5 8.4 98 35-145 26-134 (394)
430 1v4v_A UDP-N-acetylglucosamine 20.4 3.8E+02 0.013 22.4 9.4 91 44-141 23-120 (376)
431 3gem_A Short chain dehydrogena 20.2 3.5E+02 0.012 21.9 8.5 70 40-118 38-108 (260)
432 3hv2_A Response regulator/HD d 20.2 2.4E+02 0.0083 20.1 8.7 60 42-107 73-133 (153)
433 1hnj_A Beta-ketoacyl-acyl carr 20.2 3.7E+02 0.013 22.4 8.0 61 77-138 36-101 (317)
434 1zsy_A Mitochondrial 2-enoyl t 20.2 1.3E+02 0.0044 25.9 5.1 39 71-115 184-222 (357)
435 1o57_A PUR operon repressor; p 20.2 78 0.0027 27.2 3.6 40 97-140 118-157 (291)
436 3ctm_A Carbonyl reductase; alc 20.0 3.5E+02 0.012 21.8 9.9 72 42-117 47-119 (279)
437 1zuh_A Shikimate kinase; alpha 20.0 32 0.0011 26.0 1.0 28 111-140 9-36 (168)
No 1
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=100.00 E-value=1e-64 Score=446.14 Aligned_cols=246 Identities=65% Similarity=1.015 Sum_probs=234.7
Q ss_pred CeEEEEEEeeccCCCceEEecCCCeEEccCCccCCCHHhHHHHHHHHHhhhhCCCc--eEEEEeeCCchhHHHHHHHHHC
Q 025565 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLAS--EVVAVSMGPAQCVDTLRTGLAM 78 (251)
Q Consensus 1 M~IvV~~K~Vpd~~~~~~~~~~~~~~~~~~~~~~in~~d~~Ale~A~~lae~~~g~--~V~al~~G~~~~~~~l~~~la~ 78 (251)
|||+||+|||||+..++++++++++++|++++++|||+|++|||+|++|+|+ |+ +|++++||++.+++.++++++|
T Consensus 4 M~I~V~vK~Vpd~~~~~~~~~~~~~~~~~~~~~~lnp~d~~Ale~A~~Lke~--g~~~~V~av~~G~~~a~~~lr~ala~ 81 (255)
T 1efv_B 4 LRVLVAVKRVIDYAVKIRVKPDRTGVVTDGVKHSMNPFCEIAVEEAVRLKEK--KLVKEVIAVSCGPAQCQETIRTALAM 81 (255)
T ss_dssp CEEEEECCEEECTTSCCCBCTTSSSBCCTTCCEEECHHHHHHHHHHHHHHHT--TSCSEEEEEEEESTTHHHHHHHHHHH
T ss_pred CEEEEEEeEccCCCceeEEcCCCCeEEccCCCccCCHHHHHHHHHHHHHHhc--CCCceEEEEEeCChhHHHHHHHHHhc
Confidence 8999999999998878999988877999999999999999999999999996 55 9999999997788999999999
Q ss_pred CCCEEEEEe-eC---CCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccceeeEEEecCCCe
Q 025565 79 GADRGVHVE-AA---GQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQL 154 (251)
Q Consensus 79 GaD~vi~v~-~~---~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~ 154 (251)
|||++|+++ ++ ..+++++||++|++++++.+||+||||.++.|++++|++||||++||||++|+|++++++ ++.
T Consensus 82 GaD~vi~v~~d~~~~~~~~~~~~A~~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~l~~~--~~~ 159 (255)
T 1efv_B 82 GADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLE--GDK 159 (255)
T ss_dssp TCSEEEEEECCHHHHTTCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEEEEEE--TTE
T ss_pred CCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEEEEEc--CCe
Confidence 999999998 65 478999999999999999999999999999999999999999999999999999999998 899
Q ss_pred EEEEEEeCCeEEEEEECCCEEEEEeCCCCCCCCCChHHHHHhcCCCceeecCCccCCCCCCCeEEEEEeCCCCCcCeeEe
Q 025565 155 AMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVIL 234 (251)
Q Consensus 155 l~~~R~~~gG~~~~~~~~P~vvtv~~~~~~pr~p~l~~i~~A~k~~i~~~~~~dl~~~~~~~~~v~~~~~p~~~~~~~~~ 234 (251)
++++|+.|+|.+++++++|+|+|+++++|+||||+|++||+|+||||++|+++|||++..|++++.++++|++|+.++++
T Consensus 160 ~~v~R~i~gG~~~v~~~~P~VvTv~~~~~~pR~~sl~~im~A~kk~i~~~~~~dl~~~~~~~~~v~~~~~p~~~~~~~~i 239 (255)
T 1efv_B 160 LKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDLTSKLSVISVEDPPQRTAGVKV 239 (255)
T ss_dssp EEEEEEETTEEEEEEEESSEEEEECGGGCCCCCCCHHHHHHTTTSCEEEECHHHHTCCCCCSEEEEEEECCCCCCCCEEC
T ss_pred EEEEEEcCCcEEEEEECCCEEEEEeCCCCCcCCCCHHHHHHhccCCeeEecHHHcCCCCCCCeEEEEEecCCCCcCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999988899999999999988889999
Q ss_pred chHHHHHHHhhhcCCc
Q 025565 235 SSVEELIDKLKNEARV 250 (251)
Q Consensus 235 e~~~~l~~~L~~~~~~ 250 (251)
++.++|+++|++++.+
T Consensus 240 ~~~~~l~~~L~~~~~~ 255 (255)
T 1efv_B 240 ETTEDLVAKLKEIGRI 255 (255)
T ss_dssp SSHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHhcCC
Confidence 9999999999998864
No 2
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=100.00 E-value=1.7e-64 Score=444.24 Aligned_cols=246 Identities=59% Similarity=0.880 Sum_probs=229.4
Q ss_pred CeEEEEEEeeccCCCceEEecCCCeEEccCCccCCCHHhHHHHHHHHHhhhhCCCc--eEEEEeeCCchhHHHHHHHHHC
Q 025565 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLAS--EVVAVSMGPAQCVDTLRTGLAM 78 (251)
Q Consensus 1 M~IvV~~K~Vpd~~~~~~~~~~~~~~~~~~~~~~in~~d~~Ale~A~~lae~~~g~--~V~al~~G~~~~~~~l~~~la~ 78 (251)
|||+||+|||||+..++++++++++++|+++++.|||+|++|||+|++|+|+ |+ +|++++||++.+++.++++++|
T Consensus 1 M~I~V~vK~VpD~~~~~~~~~~~~~~~~~~~~~~lnp~d~~Ale~A~~Lke~--g~~~~V~av~~G~~~a~~~lr~ala~ 78 (252)
T 1efp_B 1 MKVLVPVKRLIDYNVKARVKSDGSGVDLANVKMSMNPFDEIAVEEAIRLKEK--GQAEEIIAVSIGVKQAAETLRTALAM 78 (252)
T ss_dssp CEEEEECCEEECTTSCCCBCTTSSCBCCTTCCEEECHHHHHHHHHHHHHHTT--TSCSEEEEEEEESGGGHHHHHHHHHH
T ss_pred CEEEEEEEEccCCCceeEEcCCCCEEEcccCCccCCHHHHHHHHHHHHHHhc--CCCceEEEEEeCChhHHHHHHHHHhc
Confidence 9999999999998878999988877999999999999999999999999996 55 9999999997788999999999
Q ss_pred CCCEEEEEe-eC---CCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccceeeEEEecCCCe
Q 025565 79 GADRGVHVE-AA---GQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQL 154 (251)
Q Consensus 79 GaD~vi~v~-~~---~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~ 154 (251)
|||++|+++ ++ ..+++++||++|++++++.+||+||||.++.|++++|++||||++||||++|+|++++++ ++.
T Consensus 79 GaD~vi~v~~d~~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~l~~~--~~~ 156 (252)
T 1efp_B 79 GADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIE--GAK 156 (252)
T ss_dssp TCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEEEEEC--SSE
T ss_pred CCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEEEEEc--CCe
Confidence 999999999 76 367999999999999999999999999999999999999999999999999999999998 889
Q ss_pred EEEEEEeCCeEEEEEECCCEEEEEeCCCCCCCCCChHHHHHhcCCCceeecCCccCCCCCCCeEEEEEeCCCCCcCeeEe
Q 025565 155 AMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKAGVIL 234 (251)
Q Consensus 155 l~~~R~~~gG~~~~~~~~P~vvtv~~~~~~pr~p~l~~i~~A~k~~i~~~~~~dl~~~~~~~~~v~~~~~p~~~~~~~~~ 234 (251)
++++|+.|+|.+++++++|+|+|+++++|+||||+|++||+|+||||++|+++|||++..|++++.++++|++|+.++++
T Consensus 157 ~~v~R~i~gG~~~v~~~~P~vvTv~~~~~~pR~~sl~~im~A~kk~i~~~~~~dl~~~~~~~~~v~~~~~p~~~~~~~~~ 236 (252)
T 1efp_B 157 AKVTREVDGGLQTIAVSLPAVVTADLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVAPRLEVVSVREPEGRKAGIKV 236 (252)
T ss_dssp EEEEEEETTEEEEEEEESSEEEEECTTSCCCCCCCHHHHHHHTTSCEEEEEGGGGTCCCCCSEEEEEEECCCCCCCCEEC
T ss_pred EEEEEEcCCcEEEEEECCCEEEEEeCCCCCcCCCCHHHHHhhccCCeeEecHHHcCCCCCCCcEEEEEecCCCCcCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999988899999999999988889999
Q ss_pred chHHHHHHHhhhcCCcC
Q 025565 235 SSVEELIDKLKNEARVI 251 (251)
Q Consensus 235 e~~~~l~~~L~~~~~~~ 251 (251)
++.++|+++|+ +.+||
T Consensus 237 ~~~~~l~~~L~-~~~~i 252 (252)
T 1efp_B 237 GSVDELVGKLK-EAGVI 252 (252)
T ss_dssp SSHHHHHTTC-------
T ss_pred CCHHHHHHHHH-HcCCC
Confidence 99999999999 56654
No 3
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=100.00 E-value=5.8e-62 Score=430.81 Aligned_cols=244 Identities=32% Similarity=0.547 Sum_probs=216.7
Q ss_pred CeEEEEEEeeccCCCceEEecCCCeEEccCCccCCCHHhHHHHHHHHHhhhhCCCc--eEEEEeeCCchhHHHHHHHHHC
Q 025565 1 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLAS--EVVAVSMGPAQCVDTLRTGLAM 78 (251)
Q Consensus 1 M~IvV~~K~Vpd~~~~~~~~~~~~~~~~~~~~~~in~~d~~Ale~A~~lae~~~g~--~V~al~~G~~~~~~~l~~~la~ 78 (251)
|||+||+|||||+..++++++++++++|++++..|||+|++|||+|++|+|+ .|+ +|++++||++.+++.++++++|
T Consensus 1 M~I~V~vK~Vpd~~~~~~~~~~~~~~~~~~~~~~lnp~d~~ale~A~~Lke~-~g~~~~V~av~~G~~~~~~~lr~ala~ 79 (264)
T 1o97_C 1 MKILVAVKQTAALEEDFEIREDGMDVDEDFMMYDLNEWDDFSLEEAMKIKES-SDTDVEVVVVSVGPDRVDESLRKCLAK 79 (264)
T ss_dssp CEEEEECCEEEEECTTCCBCTTSSSBCGGGEEEEECHHHHHHHHHHHHHHHH-CSSCCEEEEEEESCGGGHHHHHHHHHT
T ss_pred CEEEEEEEecCCCCceeEEcCCCCeEEcccCCCccCHHHHHHHHHHHHHHHh-cCCCceEEEEEeCchhHHHHHHHHHhc
Confidence 9999999999998668999988877999999999999999999999999998 576 9999999997788999999999
Q ss_pred CCCEEEEEeeCC--CCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccceeeEEE--ecCCCe
Q 025565 79 GADRGVHVEAAG--QLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVL--DKEKQL 154 (251)
Q Consensus 79 GaD~vi~v~~~~--~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~--~~~~~~ 154 (251)
|||++|+++++. .++++.||++|++++++.+||+||||.++.|++++|++||||++||||++|+|+++++ + ++.
T Consensus 80 GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~l~~~~~--~~~ 157 (264)
T 1o97_C 80 GADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVADLQYKPG--DNK 157 (264)
T ss_dssp TCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEEEECCTT--CSE
T ss_pred CCCEEEEEcCcccccCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEEEEEecC--CCe
Confidence 999999999654 5899999999999999999999999999999999999999999999999999999998 6 889
Q ss_pred EEEEEEeCCe-EEEEEECCCEEEEEeCCCCCCCCCChHHHHHhcCCCceeecCCccCCCC---C---CCeEEEEEeCCCC
Q 025565 155 AMVEREVDGG-LETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQELNVDV---K---SDLEVIQVTEPPK 227 (251)
Q Consensus 155 l~~~R~~~gG-~~~~~~~~P~vvtv~~~~~~pr~p~l~~i~~A~k~~i~~~~~~dl~~~~---~---~~~~v~~~~~p~~ 227 (251)
++++|++|+| .+++++++|+|+|+++++|+||||+|++||+|+||||++|+++|||+++ + |++++.++++|++
T Consensus 158 ~~~~R~i~gG~~~~v~~~~P~vvTv~~~~~~pR~psl~~im~A~kk~i~~~~~~dl~~~~~~~~l~g~~~~v~~~~~p~~ 237 (264)
T 1o97_C 158 AVIRRELEGGMLQEVEINCPAVLTIQLGINKPRYASLRGIKQAATKPIEEVSLADIGLSANDVGAAQSMSRVRRMYIPEK 237 (264)
T ss_dssp EEEEEECGGGCEEEEEEESSCEEEECTTSSCCTTCC----------CCEEECTGGGTCCGGGSSGGGSSSEEEEEECCCC
T ss_pred EEEEEEcCCCcEEEEEECCCEEEEEeCCCCCcCCCCHHHHHHhccCCeeEecHHHcCcChhhccccCCCcEEEEEecCCC
Confidence 9999999999 7889999999999999999999999999999999999999999999753 3 8899999999987
Q ss_pred CcCeeEech-----HHHHHHHhhhcC
Q 025565 228 RKAGVILSS-----VEELIDKLKNEA 248 (251)
Q Consensus 228 ~~~~~~~e~-----~~~l~~~L~~~~ 248 (251)
|+. +++++ +++|+++|++++
T Consensus 238 ~~~-~~~~~~~~e~~~~l~~~L~~~~ 262 (264)
T 1o97_C 238 GRA-TMIEGTISEQAAKIIQIINEFK 262 (264)
T ss_dssp CCC-EECCSCHHHHHHHHHHHHHHC-
T ss_pred Ccc-EEECCChHHHHHHHHHHHHHhc
Confidence 777 77853 789999998764
No 4
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=7.9e-30 Score=219.22 Aligned_cols=164 Identities=18% Similarity=0.186 Sum_probs=141.7
Q ss_pred ccCCCHHhHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCC--CCCHHHHHHHHHHHHHHhC
Q 025565 32 KMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG--QLYPLTVAKILKSLVEVEK 109 (251)
Q Consensus 32 ~~~in~~d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~--~~d~~a~a~~La~~ik~~~ 109 (251)
.-.++|.++++|++|++|+++ .|++|+++++|+. +++.++++++||+|++|+++++. .++++.|+++|++++++++
T Consensus 14 ~g~l~~~s~ell~~A~~La~~-~g~~v~av~~G~~-~~~~~~~~~~~Gad~v~~v~~~~~~~~~~~~~a~~l~~~i~~~~ 91 (217)
T 3ih5_A 14 EGIVADVSLELLTKGRSLANE-LNCQLEAVVAGTG-LKEIEKQILPYGVDKLHVFDAEGLYPYTSLPHTSILVNLFKEEQ 91 (217)
T ss_dssp TTEECHHHHHHHHHHHHHHHH-HTCCEEEEEEESC-CTTTHHHHGGGTCSEEEEEECGGGSSCCHHHHHHHHHHHHHHHC
T ss_pred CCEECHHHHHHHHHHHHHHHh-cCCeEEEEEECCC-HHHHHHHHHhcCCCEEEEecCcccccCCHHHHHHHHHHHHHhcC
Confidence 346899999999999999998 6889999999986 57789999999999999999764 6899999999999999999
Q ss_pred CCEEEEcceeecCCcCcHHHHHHHHcCCCcccceeeEEEecCCC-----------eEEEEEEeCCeEE--EEEEC--CCE
Q 025565 110 PGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQ-----------LAMVEREVDGGLE--TLELD--LPA 174 (251)
Q Consensus 110 ~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~-----------~l~~~R~~~gG~~--~~~~~--~P~ 174 (251)
||+||+|+++.+ ++++||||++||+|++++|++++++ ++ .++++|+.|+|+. ++.++ .|+
T Consensus 92 p~~Vl~g~t~~G---~~laprlAa~L~~~~~sdv~~l~~~--~~~~~~~~~~~~~~l~~~Rp~~gG~~~ati~~~~~~p~ 166 (217)
T 3ih5_A 92 PQICLMGATVIG---RDLGPRVSSALTSGLTADCTSLEIG--DHEDKKEGKVYKNLLYQIRPAFGGNIVATIVNPEHRPQ 166 (217)
T ss_dssp CSEEEEECSHHH---HHHHHHHHHHTTCCCBCSCSEEEEE--EEEETTTTEEEEEEEEEEEESSSSSCEEEECCSSSSSE
T ss_pred CCEEEEeCCcch---hhHHHHHHHHhCCCccceEEEEEec--CCccccccccccccEEEEEECCCCEEEEEEEecCCCCE
Confidence 999999998855 6799999999999999999999987 43 5999999999985 45544 699
Q ss_pred EEEEeCCCCCCCCCChHHHHHhcCCCceeecCC
Q 025565 175 VITTDLRLNQPRYATLPNIMKAKSKPIKKYTPQ 207 (251)
Q Consensus 175 vvtv~~~~~~pr~p~l~~i~~A~k~~i~~~~~~ 207 (251)
|+||++++|+|..+. ..++.+|+.++.+
T Consensus 167 v~TVr~~~f~~~~~~-----~~~~~~v~~~~~~ 194 (217)
T 3ih5_A 167 MATVREGVMKKEIVS-----PAYQGEVIRHDVK 194 (217)
T ss_dssp EEEECTTSSCCCCSC-----TTCCCEEEECCHH
T ss_pred EEEECCCCCCcCcCC-----CCCCccEEEeccc
Confidence 999999999986543 3345667666543
No 5
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=99.95 E-value=5e-28 Score=218.93 Aligned_cols=163 Identities=15% Similarity=0.146 Sum_probs=140.0
Q ss_pred cCCccCCCHHhHHHHHHHHHhhhhCCC-ceEEEEeeCCchhHHHHHH-HHHCCCCEEEEEeeCC-CCCHHHHHHHHHHHH
Q 025565 29 NNVKMSMNPFCEIALEEALRIKESGLA-SEVVAVSMGPAQCVDTLRT-GLAMGADRGVHVEAAG-QLYPLTVAKILKSLV 105 (251)
Q Consensus 29 ~~~~~~in~~d~~Ale~A~~lae~~~g-~~V~al~~G~~~~~~~l~~-~la~GaD~vi~v~~~~-~~d~~a~a~~La~~i 105 (251)
+.....+||+|+++|++|++|++ .| ++|+++++|+. ++ .+++ +++||+|++|+++++. .++++.|+++|++++
T Consensus 8 e~~~g~l~~~~~eal~~A~~L~e--~g~~~V~av~~G~~-~~-~~~~~a~a~GaDkv~~v~d~~l~~~~~~~a~~La~~i 83 (320)
T 1o97_D 8 EHRRNDLRPVSLELIGAANGLKK--SGEDKVVVAVIGSQ-AD-AFVPALSVNGVDELVVVKGSSIDFDPDVFEASVSALI 83 (320)
T ss_dssp CEETTEECTHHHHHHHHHHHHCS--STTCEEEEEEESTT-GG-GGHHHHCBTTCSEEEEEECSCSSCCHHHHHHHHHHHH
T ss_pred eCcCCCcCHHHHHHHHHHHHHhh--CCCCcEEEEEECCc-HH-HHHHHHHhcCCceEEEEeCcccCCCHHHHHHHHHHHH
Confidence 34456799999999999999998 35 59999999997 56 8888 8999999999999765 579999999999999
Q ss_pred HHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccceeeEEEecCCCeEEEEEEeCCeEE--EEEEC-C-CEEEEEeCC
Q 025565 106 EVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLE--TLELD-L-PAVITTDLR 181 (251)
Q Consensus 106 k~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~l~~~R~~~gG~~--~~~~~-~-P~vvtv~~~ 181 (251)
++.+||+||+|.++ ++++++||||++||+|++|+|++++.+ ++.++++|+.|+|+. +++++ . |+|+|++++
T Consensus 84 ~~~~pdlVL~g~ts---~G~~laprlAa~L~~~~vtdv~~l~~~--~~~l~~~R~~~gG~~~~ti~~~~~~p~viTVr~~ 158 (320)
T 1o97_D 84 AAHNPSVVLLPHSV---DSLGYASSLASKTGYGFATDVYIVEYQ--GDELVATRGGYNQKVNVEVDFPGKSTVVLTIRPS 158 (320)
T ss_dssp HHHCCSEEEEECSH---HHHTTHHHHHHTSSCEEEEEECEEEEE--TTEEEEEEEETTTTEEEEEECTTCSCEEEEECTT
T ss_pred HhcCCCEEEEeCCC---chhhHHHHHHHHhCCCccccEEEEEec--CCeEEEEEEcCCCEEEEEEEecCCCCEEEEEcCC
Confidence 99999999999988 457899999999999999999999997 677999999999974 55554 5 899999999
Q ss_pred CCCCCCCChHHHHHhcCCCceeecCC
Q 025565 182 LNQPRYATLPNIMKAKSKPIKKYTPQ 207 (251)
Q Consensus 182 ~~~pr~p~l~~i~~A~k~~i~~~~~~ 207 (251)
.|+|+ + ..++.+++.++..
T Consensus 159 ~f~~~-~------~~~~~~v~~~~~~ 177 (320)
T 1o97_D 159 VFKPL-E------GAGSPVVSNVDAP 177 (320)
T ss_dssp SSCCC-C------SBCCCEEEEEECC
T ss_pred CCCCC-C------CCCCcceEEeccC
Confidence 99987 3 2345567766553
No 6
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=99.94 E-value=3.6e-26 Score=206.35 Aligned_cols=155 Identities=15% Similarity=0.074 Sum_probs=133.4
Q ss_pred ccCCCHHhHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHH-HHCCCCEEEEEeeCC--CCCHHHHHHHHHHHHHHh
Q 025565 32 KMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTG-LAMGADRGVHVEAAG--QLYPLTVAKILKSLVEVE 108 (251)
Q Consensus 32 ~~~in~~d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~-la~GaD~vi~v~~~~--~~d~~a~a~~La~~ik~~ 108 (251)
...+||+|+++|++|++|++ +|+++++|+. +++.++++ ++||+|++|+++++. .++++.|+++|+++++++
T Consensus 12 ~g~l~~~~~eal~aA~~La~-----~V~av~~G~~-~~~~~~~a~~a~GaDkv~~v~d~~l~~~~~~~~a~~La~li~~~ 85 (315)
T 1efv_A 12 NDSLAPITLNTITAATRLGG-----EVSCLVAGTK-CDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILATQKQF 85 (315)
T ss_dssp TTEECTHHHHHHHHHHTTTS-----EEEEEEEESC-CHHHHHHHHHSTTCCEEEEEECGGGTTCCHHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHhcC-----cEEEEEECCc-hHHHHHHHHHhcCCCEEEEecCchhccCCHHHHHHHHHHHHHhc
Confidence 34689999999999999973 8999999997 78899999 899999999999764 689999999999999999
Q ss_pred CCCEEEEcceeecCCcCcHHHHHHHHcCCCcccceeeEEEecCCCeEEEEEEeCCeE--EEEEEC-CCEEEEEeCCCCCC
Q 025565 109 KPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGL--ETLELD-LPAVITTDLRLNQP 185 (251)
Q Consensus 109 ~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~l~~~R~~~gG~--~~~~~~-~P~vvtv~~~~~~p 185 (251)
+||+||+|.++ ++++++||||++||+|++|+|++++.+ + +++|+.|+|+ .+++++ .|+|+||+++.|+|
T Consensus 86 ~pdlVL~g~ts---~G~~laprlAa~L~~~~vtdv~~l~~~--~---~~~R~~~gG~~~~tv~~~~~p~viTVr~~~f~~ 157 (315)
T 1efv_A 86 NYTHICAGASA---FGKNLLPRVAAKLEVAPISDIIAIKSP--D---TFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDA 157 (315)
T ss_dssp CCSEEEEESSH---HHHHHHHHHHHHHTCCCEEEECEEEET--T---EEEEEETTTTEEEEEEECCSSEEEEECGGGSCC
T ss_pred CCCEEEEcCCC---CcchHHHHHHHHhCCCccccEEEeccC--C---EEEEEcCCCEEEEEEEeCCCCeEEEEcCCCCCC
Confidence 99999999988 347899999999999999999999986 5 8999999997 456664 68899999999987
Q ss_pred CCCChHHHHHhcCCCceeecC
Q 025565 186 RYATLPNIMKAKSKPIKKYTP 206 (251)
Q Consensus 186 r~p~l~~i~~A~k~~i~~~~~ 206 (251)
..+ ..++.+++.++.
T Consensus 158 ~~~------~~~~~~v~~~~~ 172 (315)
T 1efv_A 158 AAT------SGGSASSEKASS 172 (315)
T ss_dssp CCS------SSCCCEEEECCC
T ss_pred CCC------CCCCcceEEecc
Confidence 433 234455666554
No 7
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=99.93 E-value=7.2e-25 Score=197.17 Aligned_cols=154 Identities=14% Similarity=0.107 Sum_probs=129.2
Q ss_pred cCCccCCC-HHhHHHHHHHHHhhhhCCCceEEEEeeCCchhHHH-HHHHHHCCCCEEEEEeeCC--CCCHHHHHHHHHHH
Q 025565 29 NNVKMSMN-PFCEIALEEALRIKESGLASEVVAVSMGPAQCVDT-LRTGLAMGADRGVHVEAAG--QLYPLTVAKILKSL 104 (251)
Q Consensus 29 ~~~~~~in-~~d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~-l~~~la~GaD~vi~v~~~~--~~d~~a~a~~La~~ 104 (251)
+.....+| |+|+++|++|++| | +|+++++|+. +++. .+++++||+|++|+++++. .++++.|+++|+++
T Consensus 7 e~~~g~l~~~~~~eal~aA~~L-----g-~V~av~~G~~-~~~~~~~~a~a~GaDkv~~v~d~~l~~~~~~~~a~~La~~ 79 (307)
T 1efp_A 7 EVTNGALNRDATAKAVAAVKAL-----G-DVTVLCAGAS-AKAAAEEAAKIAGVAKVLVAEDALYGHRLAEPTAALIVGL 79 (307)
T ss_dssp CBSSSCBCHHHHHHHHHHHGGG-----S-CEEEEEEETT-CHHHHHHHHTSTTEEEEEEEECGGGTTCCHHHHHHHHHHH
T ss_pred eccCCEeCchhhHHHHHHHHHh-----C-CEEEEEECCc-hHHHHHHHHHhcCCCEEEEecCchhccCCHHHHHHHHHHH
Confidence 34456799 9999999999999 2 8999999987 5555 5678899999999999764 68999999999999
Q ss_pred HHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccceeeEEEecCCCeEEEEEEeCCeE--EEEEEC-CCEEEEEeCC
Q 025565 105 VEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGL--ETLELD-LPAVITTDLR 181 (251)
Q Consensus 105 ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~l~~~R~~~gG~--~~~~~~-~P~vvtv~~~ 181 (251)
+.+||+||+|.++ ++++++||||++||+|++|+|++++.+ + +++|+.|+|+ .+++++ .|+|+||+++
T Consensus 80 --~~~pd~VL~g~ts---~G~~laprlAa~L~~~~vtdv~~l~~~--~---~~~R~~~gG~~~~tv~~~~~p~viTVr~~ 149 (307)
T 1efp_A 80 --AGDYSHIAAPATT---DAKNVMPRVAALLDVMVLSDVSAILDA--D---TFERPIYAGNAIQVVKSKDAKKVFTIRTA 149 (307)
T ss_dssp --HTTCSEEEEESSH---HHHHHHHHHHHHTTCCEEEEESEECSS--S---EEEEEEGGGTEEEEEEECSSSEEEEECGG
T ss_pred --ccCCCEEEEeCCc---chhhHHHHHHHHhCCCccccEEEEccC--C---EEEEECCCCEEEEEEEeCCCCEEEEEcCC
Confidence 5589999999988 458899999999999999999999875 4 8999999997 456665 7999999999
Q ss_pred CCCCCCCChHHHHHhcCCCceeecC
Q 025565 182 LNQPRYATLPNIMKAKSKPIKKYTP 206 (251)
Q Consensus 182 ~~~pr~p~l~~i~~A~k~~i~~~~~ 206 (251)
.|+|.. ..++.+++.++.
T Consensus 150 ~f~~~~-------~~~~~~v~~~~~ 167 (307)
T 1efp_A 150 SFDAAG-------EGGTAPVTETAA 167 (307)
T ss_dssp GSCCCC-------SSCCCCCBCCCC
T ss_pred CCCCCC-------CCCCcceEEecc
Confidence 999752 234556665544
No 8
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=99.90 E-value=2.8e-23 Score=171.42 Aligned_cols=148 Identities=13% Similarity=0.117 Sum_probs=120.3
Q ss_pred HhHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 38 FCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 38 ~d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
..++++..|+ . +++|+++++|+..+ + ++|+|++|++++ .. +++.|+++|+++++ +||+||||+
T Consensus 15 ~~~Ell~~ar----~--~g~v~av~~G~~~~----~---~~Gad~v~~v~~-~~-~~e~~a~~l~~~~~--~p~~Vl~g~ 77 (166)
T 3fet_A 15 FLRQVNTLVA----G--KGDMDSVIIGEGDA----K---GLGSKVLYRAKK-GT-PFDAVSEGILKIAG--NYDYIAIGS 77 (166)
T ss_dssp HHHHHHHHHG----G--GEEEEEEEESCCCC----T---TCCCSEEEEECT-TC-CHHHHHHHHHHHHT--TCSEEEEEC
T ss_pred HHHHHHHhhc----c--CCcEEEEEECcchH----H---HcCCCEEEEeCC-CC-ChHHHHHHHHHHHc--CCCEEEEcC
Confidence 4667777765 2 35999999998643 2 239999999984 33 88999999999998 999999999
Q ss_pred eeecCCcCcHHHHHHHHcCCCcccceeeEEEecCCCeEEEEEEeCCeE--EEEEECCCEEEEEeCCCCCCCCCChHHHHH
Q 025565 118 QAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGL--ETLELDLPAVITTDLRLNQPRYATLPNIMK 195 (251)
Q Consensus 118 ~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~l~~~R~~~gG~--~~~~~~~P~vvtv~~~~~~pr~p~l~~i~~ 195 (251)
++ ++++++||||++||+|++|+|++++.+ ++.+.++|+.|+|+ ++++++.| |+|++++.|+++- .
T Consensus 78 t~---~g~~vaprlAa~L~~~~~sdv~~l~~~--~~~~~~~R~~~gG~~~~tv~~~~p-v~Tvr~~~f~~~~-------~ 144 (166)
T 3fet_A 78 TE---VGREIAGYLSFKTGFYTATEIFSLEFN--GQKAHTKRFFYGGKTVIEEESDAR-ILTVAPGVIEAKD-------L 144 (166)
T ss_dssp SH---HHHHHHHHHHHHHCCCEEEEEEEEEES--SSSEEEEEEEGGGTEEEEEEECCC-EEEECTTSSCCCC-------C
T ss_pred CC---ccccHHHHHHHHhCCCceeeEEEEEec--CCEEEEEEEccCCEEEEEEEeCCC-EEEECCCCCCCCC-------C
Confidence 76 557899999999999999999999998 88999999999998 46888899 9999999999643 2
Q ss_pred hcCCCceeecCCccCCCCCCCeEEEE
Q 025565 196 AKSKPIKKYTPQELNVDVKSDLEVIQ 221 (251)
Q Consensus 196 A~k~~i~~~~~~dl~~~~~~~~~v~~ 221 (251)
.++.+|+.++.+ .+++++.+
T Consensus 145 ~~~~~v~~~~~~------~~~v~~~~ 164 (166)
T 3fet_A 145 GTTPEIRDLEIG------QSRIKITK 164 (166)
T ss_dssp SCCCEEEECCCC------CCCCEEEE
T ss_pred CCCcceEEEccC------CCeEEEEe
Confidence 345566666554 35666654
No 9
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=96.54 E-value=0.025 Score=42.98 Aligned_cols=99 Identities=16% Similarity=0.230 Sum_probs=67.4
Q ss_pred CCHHhHHHHHHHHHhhhhCCCceEEEEeeCCch-------------------------hHHHH----HHHHHCCCCE---
Q 025565 35 MNPFCEIALEEALRIKESGLASEVVAVSMGPAQ-------------------------CVDTL----RTGLAMGADR--- 82 (251)
Q Consensus 35 in~~d~~Ale~A~~lae~~~g~~V~al~~G~~~-------------------------~~~~l----~~~la~GaD~--- 82 (251)
-++.+..|++.|.+++.. .+.+++.+.+-+.. +++.+ +.+-..|.+-
T Consensus 11 ~s~~s~~al~~A~~la~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~ 89 (147)
T 3hgm_A 11 GSKGAVKALEKGVGLQQL-TGAELYILCVFKHHSLLEASLSMARPEQLDIPDDALKDYATEIAVQAKTRATELGVPADKV 89 (147)
T ss_dssp SBHHHHHHHHHHHHHHHH-HCCEEEEEEEECCHHHHHHTBSSCCCGGGCCCTTHHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred CCHHHHHHHHHHHHHHHh-cCCEEEEEEEecCcccccccccccChhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCccce
Confidence 367889999999999997 58899988775532 11222 2334567653
Q ss_pred EEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCC----cCcHHHHHHHHcCCCcc
Q 025565 83 GVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDD----CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 83 vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 140 (251)
-..+... ++ +..|.+.+++.++|+|++|....++- -|.++-++......|++
T Consensus 90 ~~~~~~g---~~---~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVl 145 (147)
T 3hgm_A 90 RAFVKGG---RP---SRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAHCPVL 145 (147)
T ss_dssp EEEEEES---CH---HHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCSSCEE
T ss_pred EEEEecC---CH---HHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCCCCEE
Confidence 2333322 23 47888899999999999998764432 35677778887777754
No 10
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=96.10 E-value=0.068 Score=41.70 Aligned_cols=100 Identities=16% Similarity=0.053 Sum_probs=68.1
Q ss_pred CHHhHHHHHHHHHhhhhCCCceEEEEeeCCc----------hhHHHH----HHHHHCCCCEEEEEeeCCCCCHHHHHHHH
Q 025565 36 NPFCEIALEEALRIKESGLASEVVAVSMGPA----------QCVDTL----RTGLAMGADRGVHVEAAGQLYPLTVAKIL 101 (251)
Q Consensus 36 n~~d~~Ale~A~~lae~~~g~~V~al~~G~~----------~~~~~l----~~~la~GaD~vi~v~~~~~~d~~a~a~~L 101 (251)
++.+..|++.|.+|+.. .+.+++.+.+-+. .+++.+ +.+-..|.+--+...-. .-++ +..|
T Consensus 35 s~~s~~al~~A~~la~~-~~a~l~llhV~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~v~-~G~~---~~~I 109 (155)
T 3dlo_A 35 SDRAERVLRFAAEEARL-RGVPVYVVHSLPGGGRTKDEDIIEAKETLSWAVSIIRKEGAEGEEHLLVR-GKEP---PDDI 109 (155)
T ss_dssp SHHHHHHHHHHHHHHHH-HTCCEEEEEEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEES-SSCH---HHHH
T ss_pred CHHHHHHHHHHHHHHHh-cCCEEEEEEEEcCCCcccHHHHHHHHHHHHHHHHHHHhcCCCceEEEEec-CCCH---HHHH
Confidence 68899999999999997 6789999888542 122222 33445687643322111 1133 4788
Q ss_pred HHHHHHhCCCEEEEcceeecCC----cCcHHHHHHHHcCCCcc
Q 025565 102 KSLVEVEKPGLIILGKQAIDDD----CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 102 a~~ik~~~~dlIl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 140 (251)
.+.+++.++|+|++|....++- -|.++-++......|++
T Consensus 110 ~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~a~~PVL 152 (155)
T 3dlo_A 110 VDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILKANKPVI 152 (155)
T ss_dssp HHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHHCSSCEE
T ss_pred HHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHhCCCCEE
Confidence 8899999999999998876543 25677777787777754
No 11
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=95.92 E-value=0.045 Score=42.27 Aligned_cols=100 Identities=14% Similarity=0.046 Sum_probs=66.0
Q ss_pred CCHHhHHHHHHHHHhhhhCCCceEEEEeeCCch-------------------hHHHHH----HHHHCCCC-EEEEEeeCC
Q 025565 35 MNPFCEIALEEALRIKESGLASEVVAVSMGPAQ-------------------CVDTLR----TGLAMGAD-RGVHVEAAG 90 (251)
Q Consensus 35 in~~d~~Ale~A~~lae~~~g~~V~al~~G~~~-------------------~~~~l~----~~la~GaD-~vi~v~~~~ 90 (251)
-++.+..|++.|.+|+.. .+.+++.+.+-+.. +++.++ .+-..|.+ --.++...
T Consensus 26 ~s~~s~~al~~a~~la~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~v~~~- 103 (156)
T 3fg9_A 26 DNTSSERAFRYATTLAHD-YDVPLGICSVLESEDINIFDSLTPSKIQAKRKHVEDVVAEYVQLAEQRGVNQVEPLVYEG- 103 (156)
T ss_dssp CCHHHHHHHHHHHHHHHH-HTCCEEEEEEECCCCTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEEC-
T ss_pred CCHHHHHHHHHHHHHHHh-cCCEEEEEEEEeCCCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEeC-
Confidence 368889999999999998 57889888774421 122232 23456874 22333321
Q ss_pred CCCHHHHHHHHHHH-HHHhCCCEEEEcceeecCC---cCcHHHHHHHHcCCCcc
Q 025565 91 QLYPLTVAKILKSL-VEVEKPGLIILGKQAIDDD---CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 91 ~~d~~a~a~~La~~-ik~~~~dlIl~G~~s~d~~---~~~v~~~lA~~Lg~p~v 140 (251)
-++ +..|.+. +++.++|+|++|....++- -|.++-++.....+|++
T Consensus 104 -g~~---~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a~~PVl 153 (156)
T 3fg9_A 104 -GDV---DDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKAPISVI 153 (156)
T ss_dssp -SCH---HHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHCSSEEE
T ss_pred -CCH---HHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhCCCCEE
Confidence 122 4678887 8889999999998754432 35567777777777754
No 12
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=95.80 E-value=0.056 Score=40.76 Aligned_cols=99 Identities=17% Similarity=0.137 Sum_probs=64.2
Q ss_pred CCHHhHHHHHHHHHhhhhCCCceEEEEeeCCch-------------------hHHHHHHHHH-CCC-CEEEEEeeCCCCC
Q 025565 35 MNPFCEIALEEALRIKESGLASEVVAVSMGPAQ-------------------CVDTLRTGLA-MGA-DRGVHVEAAGQLY 93 (251)
Q Consensus 35 in~~d~~Ale~A~~lae~~~g~~V~al~~G~~~-------------------~~~~l~~~la-~Ga-D~vi~v~~~~~~d 93 (251)
-++.+..|++.|.+++.. .+.+++.+.+-+.. +++.++++.. .|. +--+.+... +
T Consensus 11 ~s~~s~~al~~a~~la~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~g---~ 86 (137)
T 2z08_A 11 GSEHARRAAEVAKAEAEA-HGARLIVVHAYEPVPDYLGEPFFEEALRRRLERAEGVLEEARALTGVPKEDALLLEG---V 86 (137)
T ss_dssp SSHHHHHHHHHHHHHHHH-HTCEEEEEEEECC--------------CHHHHHHHHHHHHHHHHHCCCGGGEEEEES---S
T ss_pred CCHHHHHHHHHHHHHHhh-cCCEEEEEEEecCCCccccccchHHHHHHHHHHHHHHHHHHHHHcCCCccEEEEEec---C
Confidence 357788999999999987 57888888654311 1122333332 465 311222211 2
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEcceeecCC----cCcHHHHHHHHcCCCcc
Q 025565 94 PLTVAKILKSLVEVEKPGLIILGKQAIDDD----CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 94 ~~a~a~~La~~ik~~~~dlIl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 140 (251)
.+..|.+.+++.++|+|++|....++- -|.++-++.....+|++
T Consensus 87 ---~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVl 134 (137)
T 2z08_A 87 ---PAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEAPCPVL 134 (137)
T ss_dssp ---HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHCSSCEE
T ss_pred ---HHHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcCCCCEE
Confidence 257888899999999999998864432 35677778787777754
No 13
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=95.75 E-value=0.053 Score=41.13 Aligned_cols=99 Identities=14% Similarity=0.149 Sum_probs=64.8
Q ss_pred CCHHhHHHHHHHHHhhhhCCCceEEEEeeCCc---------------------hhHHHHHH----HHHCCC-CEEEEEee
Q 025565 35 MNPFCEIALEEALRIKESGLASEVVAVSMGPA---------------------QCVDTLRT----GLAMGA-DRGVHVEA 88 (251)
Q Consensus 35 in~~d~~Ale~A~~lae~~~g~~V~al~~G~~---------------------~~~~~l~~----~la~Ga-D~vi~v~~ 88 (251)
-++.+..|++.|.+++.. .+.+++.+.+-+. .+++.+++ +...|. +--+.+..
T Consensus 14 ~s~~s~~al~~A~~la~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~ 92 (146)
T 3s3t_A 14 SSDAAQAAFTEAVNIAQR-HQANLTALYVVDDSAYHTPALDPVLSELLDAEAAHAKDAMRQRQQFVATTSAPNLKTEISY 92 (146)
T ss_dssp SSHHHHHHHHHHHHHHHH-HTCEEEEEEEEECCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHh-cCCEEEEEEEecCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEEEec
Confidence 467899999999999997 6789998877432 11222222 234566 32223321
Q ss_pred CCCCCHHHHHHHHHH-HHHHhCCCEEEEcceeecCC----cCcHHHHHHHHcCCCcc
Q 025565 89 AGQLYPLTVAKILKS-LVEVEKPGLIILGKQAIDDD----CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 89 ~~~~d~~a~a~~La~-~ik~~~~dlIl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 140 (251)
. + .+..|.+ .+++.++|+|++|....++- -|.++-++.....+|++
T Consensus 93 g---~---~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVl 143 (146)
T 3s3t_A 93 G---I---PKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAPCNVI 143 (146)
T ss_dssp E---C---HHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCSSEEE
T ss_pred C---C---hHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCCCCEE
Confidence 1 2 2467778 88888999999998765432 34567777777777753
No 14
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=95.58 E-value=0.1 Score=39.11 Aligned_cols=97 Identities=11% Similarity=0.036 Sum_probs=63.8
Q ss_pred CCHHhHHHHHHHHHhh-hhCCCceEEEEeeCCc---------------------hhHHHHH----HHHHCCCCEEEEEee
Q 025565 35 MNPFCEIALEEALRIK-ESGLASEVVAVSMGPA---------------------QCVDTLR----TGLAMGADRGVHVEA 88 (251)
Q Consensus 35 in~~d~~Ale~A~~la-e~~~g~~V~al~~G~~---------------------~~~~~l~----~~la~GaD~vi~v~~ 88 (251)
.++.+..|++.|.+++ .. .+.+++.+.+-+. .+++.++ .+...|.+--..+..
T Consensus 10 ~s~~s~~al~~a~~la~~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~v~~ 88 (138)
T 3idf_A 10 DTEACERAAQYILDMFGKD-ADCTLTLIHVKPEFMLYGEAVLAAYDEIEMKEEEKAKLLTQKFSTFFTEKGINPFVVIKE 88 (138)
T ss_dssp SSHHHHHHHHHHHHHHTTC-TTEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhccC-CCCEEEEEEEecCCCcccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 3678999999999999 76 6889998877552 1222222 233457653333332
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCc---CcHHHHHHHHcCCCcc
Q 025565 89 AGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDC---NQTGQMVAGLLSWPQG 140 (251)
Q Consensus 89 ~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~---~~v~~~lA~~Lg~p~v 140 (251)
. + .+..|.+.++ ++|+|++|....++-. |.++-.+......|++
T Consensus 89 g---~---~~~~I~~~a~--~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~~pVl 135 (138)
T 3idf_A 89 G---E---PVEMVLEEAK--DYNLLIIGSSENSFLNKIFASHQDDFIQKAPIPVL 135 (138)
T ss_dssp S---C---HHHHHHHHHT--TCSEEEEECCTTSTTSSCCCCTTCHHHHHCSSCEE
T ss_pred C---C---hHHHHHHHHh--cCCEEEEeCCCcchHHHHhCcHHHHHHhcCCCCEE
Confidence 1 2 3467777777 9999999987544322 5566777777777754
No 15
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=95.29 E-value=0.12 Score=39.29 Aligned_cols=97 Identities=12% Similarity=0.070 Sum_probs=61.5
Q ss_pred CHHhHHHHHHHHHhhhhCCCceEEEEeeCCch-------------------------hHHHHHHHH-HCCCC--EEEEEe
Q 025565 36 NPFCEIALEEALRIKESGLASEVVAVSMGPAQ-------------------------CVDTLRTGL-AMGAD--RGVHVE 87 (251)
Q Consensus 36 n~~d~~Ale~A~~lae~~~g~~V~al~~G~~~-------------------------~~~~l~~~l-a~GaD--~vi~v~ 87 (251)
++.+..|++.|.+++.. .+.+++.+.+-+.. +++.++++. .+|.. +.....
T Consensus 16 s~~s~~al~~a~~la~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 94 (150)
T 3tnj_A 16 SSEDSQVVQKVRNLASQ-IGARLSLIHVLDNIPMPDTPYGTAIPLDTETTYDAMLDVEKQKLSQIGNTLGIDPAHRWLVW 94 (150)
T ss_dssp STTHHHHHHHHHHHHHH-HTCEEEEEEEEC--------CTTCCCSSSCCCHHHHHHHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred CHHHHHHHHHHHHHHhh-cCCEEEEEEEEcCccccccccccccCcCHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEec
Confidence 56689999999999998 67899888764321 122233322 24655 233332
Q ss_pred eCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecC---CcCcHHHHHHHHcCCCcc
Q 025565 88 AAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDD---DCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 88 ~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~---~~~~v~~~lA~~Lg~p~v 140 (251)
+ ++ +..|.+.+++.++|+|++|....++ --|.++-.+......|++
T Consensus 95 g----~~---~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~~pVl 143 (150)
T 3tnj_A 95 G----EP---REEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAKCDVL 143 (150)
T ss_dssp S----CH---HHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCSSEEE
T ss_pred C----CH---HHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCCCCEE
Confidence 1 23 4788889999999999999875443 225567777777777654
No 16
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=95.13 E-value=0.15 Score=38.46 Aligned_cols=93 Identities=13% Similarity=0.046 Sum_probs=60.6
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCch-----------------------hHHHHHHHH-HCCCC----EEEEEeeCC
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPAQ-----------------------CVDTLRTGL-AMGAD----RGVHVEAAG 90 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~~-----------------------~~~~l~~~l-a~GaD----~vi~v~~~~ 90 (251)
+..|++.|.+++.. .+.+++.+.+-+.. ..+.+++.+ .+|.+ +.....+
T Consensus 16 s~~al~~a~~la~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~g-- 92 (143)
T 3fdx_A 16 TERIISHVESEARI-DDAEVHFLTVIPSLPYYASLGMAYTAELPGMDELREGSETQLKEIAKKFSIPEDRMHFHVAEG-- 92 (143)
T ss_dssp CTTHHHHHHHHHHH-HTCEEEEEEEECC----------------CHHHHHHHHHHHHHHHHTTSCCCGGGEEEEEEES--
T ss_pred HHHHHHHHHHHHHh-cCCeEEEEEEecCCcccccccccccchhhhHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEec--
Confidence 67899999999987 67899888765431 111233322 34543 2223221
Q ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEcceeecCC----cCcHHHHHHHHcCCCcc
Q 025565 91 QLYPLTVAKILKSLVEVEKPGLIILGKQAIDDD----CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 91 ~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 140 (251)
++ +..|.+.+++.++|+|++|... ++- -|.++-++.....+|++
T Consensus 93 --~~---~~~I~~~a~~~~~dliV~G~~~-~~~~~~~~Gs~~~~v~~~~~~pVl 140 (143)
T 3fdx_A 93 --SP---KDKILALAKSLPADLVIIASHR-PDITTYLLGSNAAAVVRHAECSVL 140 (143)
T ss_dssp --CH---HHHHHHHHHHTTCSEEEEESSC-TTCCSCSSCHHHHHHHHHCSSEEE
T ss_pred --Ch---HHHHHHHHHHhCCCEEEEeCCC-CCCeeeeeccHHHHHHHhCCCCEE
Confidence 23 5788889999999999999984 332 24567777777777754
No 17
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=94.80 E-value=0.34 Score=37.35 Aligned_cols=99 Identities=16% Similarity=0.118 Sum_probs=64.6
Q ss_pred CCHHhHHHHHHHHHhhhhCCCceEEEEeeCCch-----------------------------------hHHHHHH----H
Q 025565 35 MNPFCEIALEEALRIKESGLASEVVAVSMGPAQ-----------------------------------CVDTLRT----G 75 (251)
Q Consensus 35 in~~d~~Ale~A~~lae~~~g~~V~al~~G~~~-----------------------------------~~~~l~~----~ 75 (251)
-++.+..|++.|.+++.. .|.+++.+.+-+.. +++.+.+ +
T Consensus 14 ~s~~s~~al~~a~~la~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 92 (162)
T 1mjh_A 14 FSETAEIALKHVKAFKTL-KAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAKNKMENIKKEL 92 (162)
T ss_dssp SCHHHHHHHHHHHHTCCS-SCCEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhh-cCCeEEEEEEecCccccccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467789999999999987 67888887653211 0111222 2
Q ss_pred HHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCC----cCcHHHHHHHHcCCCcc
Q 025565 76 LAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDD----CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 76 la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 140 (251)
-..|.+--+++... + .+..|.+.+++.++|+|++|....++- -|.++-++.....+|++
T Consensus 93 ~~~g~~~~~~v~~G---~---~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~~~pVl 155 (162)
T 1mjh_A 93 EDVGFKVKDIIVVG---I---PHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVL 155 (162)
T ss_dssp HHTTCEEEEEEEEE---C---HHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHCCSCEE
T ss_pred HHcCCceEEEEcCC---C---HHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhCCCCEE
Confidence 34576533333321 2 357888899999999999998754432 35577777777777754
No 18
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=94.37 E-value=0.17 Score=38.03 Aligned_cols=78 Identities=13% Similarity=0.132 Sum_probs=51.6
Q ss_pred CHHhHHHHHHHHHhhhhCCCceEEEEeeC-C-c--------------------hhHHHHHHHH-HCCCCE--EEEEeeCC
Q 025565 36 NPFCEIALEEALRIKESGLASEVVAVSMG-P-A--------------------QCVDTLRTGL-AMGADR--GVHVEAAG 90 (251)
Q Consensus 36 n~~d~~Ale~A~~lae~~~g~~V~al~~G-~-~--------------------~~~~~l~~~l-a~GaD~--vi~v~~~~ 90 (251)
++.+..|++.|.+++.. .+.+++.+.+- + . .+.+.++++. ..|.+. .....+
T Consensus 12 s~~s~~al~~a~~la~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g-- 88 (141)
T 1jmv_A 12 SEESPILLKKAVGIAKR-HDAKLSIIHVDVNFSDLYTGLIDVNMSSMQDRISTETQKALLDLAESVDYPISEKLSGSG-- 88 (141)
T ss_dssp STTHHHHHHHHHHHHHH-HTCEEEEEEEEECCGGGCCCCEEHHHHHHTTCCCCHHHHHHHHHHHHSSSCCCCEEEEEE--
T ss_pred chhhHHHHHHHHHHHHh-cCCEEEEEEEecCchhhhccccccchHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecC--
Confidence 45678899999999987 57888888664 2 1 1223344433 357652 222222
Q ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEcceeecC
Q 025565 91 QLYPLTVAKILKSLVEVEKPGLIILGKQAIDD 122 (251)
Q Consensus 91 ~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~ 122 (251)
++ +..|.+.+++.++|+|++|.. .++
T Consensus 89 --~~---~~~I~~~a~~~~~dliV~G~~-~~~ 114 (141)
T 1jmv_A 89 --DL---GQVLSDAIEQYDVDLLVTGHH-QDF 114 (141)
T ss_dssp --CH---HHHHHHHHHHTTCCEEEEEEC-CCC
T ss_pred --CH---HHHHHHHHHhcCCCEEEEeCC-Cch
Confidence 22 578888999999999999987 543
No 19
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=94.31 E-value=0.31 Score=37.96 Aligned_cols=99 Identities=15% Similarity=-0.019 Sum_probs=64.0
Q ss_pred CCHHhHHHHHHHHHhhhhCCCceEEEEeeCCch------------------------------hHHHHHH----HHHCCC
Q 025565 35 MNPFCEIALEEALRIKESGLASEVVAVSMGPAQ------------------------------CVDTLRT----GLAMGA 80 (251)
Q Consensus 35 in~~d~~Ale~A~~lae~~~g~~V~al~~G~~~------------------------------~~~~l~~----~la~Ga 80 (251)
-++.+..|++.|.+++.. .+.+++.+.+-+.. +++.+++ +-..|.
T Consensus 14 ~s~~s~~al~~A~~la~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~ 92 (170)
T 2dum_A 14 FSEGAYRAVEVFEKRNKM-EVGEVILLHVIDEGTLEELMDGYSFFYDNAEIELKDIKEKLKEEASRKLQEKAEEVKRAFR 92 (170)
T ss_dssp SSHHHHHHHHHHHHHCCS-CCSEEEEEEEEETTGGGCCC------------CCTTSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHh-cCCEEEEEEEecCccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 367788999999999987 68888887642110 1122222 223476
Q ss_pred CEEE--EEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCC----cCcHHHHHHHHcCCCcc
Q 025565 81 DRGV--HVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDD----CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 81 D~vi--~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 140 (251)
+--. ++... + .+..|.+.+++.++|+|++|....++- -|.++-++.....+|++
T Consensus 93 ~~~~~~~~~~g---~---~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~~~PVl 152 (170)
T 2dum_A 93 AKNVRTIIRFG---I---PWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTKKPVL 152 (170)
T ss_dssp CSEEEEEEEEE---C---HHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCSSCEE
T ss_pred ceeeeeEEecC---C---hHHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhCCCCEE
Confidence 5222 23211 2 357888899999999999998854432 34577778888777754
No 20
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=94.19 E-value=0.38 Score=41.06 Aligned_cols=99 Identities=18% Similarity=0.125 Sum_probs=68.7
Q ss_pred CCHHhHHHHHHHHHhhhhCCCceEEEEeeCCch-----hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhC
Q 025565 35 MNPFCEIALEEALRIKESGLASEVVAVSMGPAQ-----CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEK 109 (251)
Q Consensus 35 in~~d~~Ale~A~~lae~~~g~~V~al~~G~~~-----~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~ 109 (251)
-++.+..+++.|.+++.. .+.+++.+.+.+.. .++..+.+-..|.+--+.+.. + ++ +..|.+.+++.+
T Consensus 179 ~s~~s~~al~~a~~la~~-~~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~--g-~~---~~~I~~~a~~~~ 251 (294)
T 3loq_A 179 FSKWADRALEYAKFVVKK-TGGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHVHIES--G-TP---HKAILAKREEIN 251 (294)
T ss_dssp SSHHHHHHHHHHHHHHHH-HTCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEEC--S-CH---HHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhhh-cCCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEEEEec--C-CH---HHHHHHHHHhcC
Confidence 467899999999999987 57899999987642 223344455678873334432 1 33 578888999999
Q ss_pred CCEEEEcceeecCC----cCcHHHHHHHHcCCCcc
Q 025565 110 PGLIILGKQAIDDD----CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 110 ~dlIl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 140 (251)
+|+|++|....++- -|.++-.+.....+|++
T Consensus 252 ~dLlV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pvL 286 (294)
T 3loq_A 252 ATTIFMGSRGAGSVMTMILGSTSESVIRRSPVPVF 286 (294)
T ss_dssp CSEEEEECCCCSCHHHHHHHCHHHHHHHHCSSCEE
T ss_pred cCEEEEeCCCCCCccceeeCcHHHHHHhcCCCCEE
Confidence 99999999764432 23455666666777654
No 21
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=93.87 E-value=0.73 Score=35.96 Aligned_cols=99 Identities=14% Similarity=0.117 Sum_probs=63.9
Q ss_pred CCCHHhHHHHHHHHHhhhhCCCceEEEE--eeCCch--------------------hHHHHH----HHHHCCCC-EEEEE
Q 025565 34 SMNPFCEIALEEALRIKESGLASEVVAV--SMGPAQ--------------------CVDTLR----TGLAMGAD-RGVHV 86 (251)
Q Consensus 34 ~in~~d~~Ale~A~~lae~~~g~~V~al--~~G~~~--------------------~~~~l~----~~la~GaD-~vi~v 86 (251)
--++.+..|++.|.+++. .+.+++.+ .+-+.. +++.++ .+...|.+ --+.+
T Consensus 25 D~s~~s~~al~~A~~lA~--~~a~l~ll~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gv~~v~~~v 102 (163)
T 1tq8_A 25 DGSDSSMRAVDRAAQIAG--ADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEERP 102 (163)
T ss_dssp CSSHHHHHHHHHHHHHHT--TTSEEEEEEECCC--------------------CCTHHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhC--CCCEEEEEEeeeccCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 346888999999999998 47799988 542210 122222 23346776 22333
Q ss_pred eeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCC----cCcHHHHHHHHcCCCcc
Q 025565 87 EAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDD----CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 87 ~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 140 (251)
.. + ++ +..|.+.+++.++|+|++|....++- -|.++-++.....+|++
T Consensus 103 ~~--G-~~---~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a~~PVl 154 (163)
T 1tq8_A 103 IV--G-AP---VDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVL 154 (163)
T ss_dssp EC--S-SH---HHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHTTCEEE
T ss_pred ec--C-CH---HHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhCCCCEE
Confidence 31 1 33 57888899999999999999754431 24566777777776654
No 22
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=93.72 E-value=0.33 Score=41.39 Aligned_cols=99 Identities=12% Similarity=-0.015 Sum_probs=68.2
Q ss_pred CHHhHHHHHHHHHhhhhCCCceEEEEeeCCc-hhHHH----HHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCC
Q 025565 36 NPFCEIALEEALRIKESGLASEVVAVSMGPA-QCVDT----LRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKP 110 (251)
Q Consensus 36 n~~d~~Ale~A~~lae~~~g~~V~al~~G~~-~~~~~----l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~ 110 (251)
++.+..|++.|.+|+.. .+.+++.+.+-++ .+++. .+.+...|.+--..+.. .-++ +..|.+.+++.++
T Consensus 17 s~~s~~al~~A~~la~~-~~a~l~ll~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~g~~---~~~i~~~a~~~~~ 90 (290)
T 3mt0_A 17 DQLEGLALKRAQLIAGV-TQSHLHLLVCEKRRDHSAALNDLAQELREEGYSVSTNQAW--KDSL---HQTIIAEQQAEGC 90 (290)
T ss_dssp SCSCCHHHHHHHHHHHH-HCCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEEC--SSSH---HHHHHHHHHHHTC
T ss_pred CccchHHHHHHHHHHHh-cCCeEEEEEeeCcHHHHHHHHHHHHHHhhCCCeEEEEEEe--CCCH---HHHHHHHHHhcCC
Confidence 45577999999999998 6889999988642 22333 34444567765444431 1122 4678888888999
Q ss_pred CEEEEcceeecCC----cCcHHHHHHHHcCCCcc
Q 025565 111 GLIILGKQAIDDD----CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 111 dlIl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 140 (251)
|+|++|....++- -|.+.-.+....+.|++
T Consensus 91 dliV~G~~~~~~~~~~~~gs~~~~vl~~~~~PVl 124 (290)
T 3mt0_A 91 GLIIKQHFPDNPLKKAILTPDDWKLLRFAPCPVL 124 (290)
T ss_dssp SEEEEECCCSCTTSTTSCCHHHHHHHHHCSSCEE
T ss_pred CEEEEecccCCchhhcccCHHHHHHHhcCCCCEE
Confidence 9999999764432 35677788888888864
No 23
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=92.77 E-value=0.4 Score=35.85 Aligned_cols=92 Identities=20% Similarity=0.120 Sum_probs=59.2
Q ss_pred CHHhHHHHHHHHHhhhhCCCceEEEEeeC-Cc---h---------------------hHHHHHHHHHC---CC--CEEEE
Q 025565 36 NPFCEIALEEALRIKESGLASEVVAVSMG-PA---Q---------------------CVDTLRTGLAM---GA--DRGVH 85 (251)
Q Consensus 36 n~~d~~Ale~A~~lae~~~g~~V~al~~G-~~---~---------------------~~~~l~~~la~---Ga--D~vi~ 85 (251)
++.+..|++.|.+++.. .|.+++.+.+- +. . +++.++++ .. +. .--++
T Consensus 14 s~~s~~al~~a~~la~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~ 91 (138)
T 1q77_A 14 YSDCEKAITYAVNFSEK-LGAELDILAVLEDVYNLERANVTFGLPFPPEIKEESKKRIERRLREV-WEKLTGSTEIPGVE 91 (138)
T ss_dssp TCCCHHHHHHHHHHHTT-TCCEEEEEEECHHHHHHHHHHHHHCCCCCTHHHHHHHHHHHHHHHHH-HHHHHSCCCCCCEE
T ss_pred CHhHHHHHHHHHHHHHH-cCCeEEEEEEecccccccccccccCCCCChHHHHHHHHHHHHHHHHH-HHHhhccCCcceEE
Confidence 34477899999999987 68899988765 31 0 11223333 21 21 11112
Q ss_pred EeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 86 VEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 86 v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
+.. + + .+..|.+.+++.++|+|++|.... .++-++......|++
T Consensus 92 ~~~--g-~---~~~~I~~~a~~~~~dliV~G~~g~-----sv~~~vl~~a~~PVl 135 (138)
T 1q77_A 92 YRI--G-P---LSEEVKKFVEGKGYELVVWACYPS-----AYLCKVIDGLNLASL 135 (138)
T ss_dssp EEC--S-C---HHHHHHHHHTTSCCSEEEECSCCG-----GGTHHHHHHSSSEEE
T ss_pred EEc--C-C---HHHHHHHHHHhcCCCEEEEeCCCC-----chHHHHHHhCCCceE
Confidence 221 1 2 356888889989999999998632 578888888877754
No 24
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=91.37 E-value=1.9 Score=33.48 Aligned_cols=99 Identities=11% Similarity=0.173 Sum_probs=58.6
Q ss_pred CHHhHHHHHHHHHhhhhC--CCceEEEEeeCCch---------------------------hHHHHHH----HHHCCCCE
Q 025565 36 NPFCEIALEEALRIKESG--LASEVVAVSMGPAQ---------------------------CVDTLRT----GLAMGADR 82 (251)
Q Consensus 36 n~~d~~Ale~A~~lae~~--~g~~V~al~~G~~~---------------------------~~~~l~~----~la~GaD~ 82 (251)
.+.+..|++.|.+++.+. .+.+++.+.+-+.. +.+.+++ +...|.+-
T Consensus 24 ~~~s~~al~~a~~la~~~~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~ 103 (175)
T 2gm3_A 24 SISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDEDGFDDVDSIYASPEDFRDMRQSNKAKGLHLLEFFVNKCHEIGVGC 103 (175)
T ss_dssp CHHHHHHHHHHHHHTTTTCTTSEEEEEEEEEC----------CCCCSHHHHHHHTTSHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred cHHHHHHHHHHHHHhhcccCCCCEEEEEEEeecccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCce
Confidence 347889999999976331 36688877542110 1122222 23457653
Q ss_pred EEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCC----cCcHHHHHHHHcCCCcc
Q 025565 83 GVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDD----CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 83 vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 140 (251)
-+++... ++ +..|.+.+++.++|+|++|....++- -|.++-++.....+|++
T Consensus 104 ~~~v~~G---~~---~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~~pVl 159 (175)
T 2gm3_A 104 EAWIKTG---DP---KDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVM 159 (175)
T ss_dssp EEEEEES---CH---HHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCSSCEE
T ss_pred EEEEecC---CH---HHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCCCCEE
Confidence 3334321 33 57888899999999999998754431 24566666666666654
No 25
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=91.20 E-value=0.62 Score=39.67 Aligned_cols=93 Identities=14% Similarity=0.071 Sum_probs=59.3
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCch------------------hHHHHHHHH-HCCCC--EEEEEeeCCCCCHHHH
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPAQ------------------CVDTLRTGL-AMGAD--RGVHVEAAGQLYPLTV 97 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~~------------------~~~~l~~~l-a~GaD--~vi~v~~~~~~d~~a~ 97 (251)
+..|++.|.+++.. .+.+++.+.+-+.. +.+.+++.+ .+|.+ +..+..+ ++
T Consensus 154 s~~al~~a~~la~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~v~~g----~~--- 225 (290)
T 3mt0_A 154 HAGIISHAYDIAGL-AKATLHVISAHPSPMLSSADPTFQLSETIEARYREACRTFQAEYGFSDEQLHIEEG----PA--- 225 (290)
T ss_dssp HHHHHHHHHHHHHH-TTCEEEEEEEEC---------CHHHHHHHHHHHHHHHHHHHHHHTCCTTTEEEEES----CH---
T ss_pred HHHHHHHHHHHHHH-cCCeEEEEEEecCccccccCchhHHHHHHHHHHHHHHHHHHHHcCCCcceEEEecc----CH---
Confidence 78999999999998 68899988775421 122233322 35764 2233331 33
Q ss_pred HHHHHHHHHHhCCCEEEEcceeecCCc----CcHHHHHHHHcCCCc
Q 025565 98 AKILKSLVEVEKPGLIILGKQAIDDDC----NQTGQMVAGLLSWPQ 139 (251)
Q Consensus 98 a~~La~~ik~~~~dlIl~G~~s~d~~~----~~v~~~lA~~Lg~p~ 139 (251)
+..|.+.+++.++|+|++|....++-. |.++-.+.....+|+
T Consensus 226 ~~~I~~~a~~~~~dLiVmG~~g~~~~~~~~~Gsv~~~vl~~~~~pV 271 (290)
T 3mt0_A 226 DVLIPRTAQKLDAVVTVIGTVARTGLSGALIGNTAEVVLDTLESDV 271 (290)
T ss_dssp HHHHHHHHHHHTCSEEEEECCSSCCGGGCCSCHHHHHHHTTCSSEE
T ss_pred HHHHHHHHHhcCCCEEEECCCCCcCCcceecchHHHHHHhcCCCCE
Confidence 478888999999999999987654432 344555555555554
No 26
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=91.11 E-value=1.2 Score=38.14 Aligned_cols=98 Identities=17% Similarity=0.036 Sum_probs=63.9
Q ss_pred CHHhHHHHHHHHHhhhhCCCceEEEEeeCCc-----------------------hhHHHHHH----HHHCCCCEEEEEe-
Q 025565 36 NPFCEIALEEALRIKESGLASEVVAVSMGPA-----------------------QCVDTLRT----GLAMGADRGVHVE- 87 (251)
Q Consensus 36 n~~d~~Ale~A~~lae~~~g~~V~al~~G~~-----------------------~~~~~l~~----~la~GaD~vi~v~- 87 (251)
.+.+..|+..|..|+.. .+.+++.+.+-+. .+++.+++ +...|..--+.+.
T Consensus 17 s~~s~~al~~A~~lA~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~ 95 (319)
T 3olq_A 17 NQDDQPALRRAVYIVQR-NGGRIKAFLPVYDLSYDMTTLLSPDERNAMRKGVINQKTAWIKQQARYYLEAGIQIDIKVIW 95 (319)
T ss_dssp TCSCCHHHHHHHHHHHH-HCCEEEEEEEECCGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CcccHHHHHHHHHHHHH-cCCeEEEEEEecccchhhccccChhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEEEe
Confidence 44567899999999998 6789998876321 01122222 2345766444443
Q ss_pred eCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCC----cCcHHHHHHHHcCCCcc
Q 025565 88 AAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDD----CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 88 ~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 140 (251)
.. ++ +..|.+.+++.++|+|++|....++. -|.+.-++....+.|++
T Consensus 96 ~g---~~---~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PVl 146 (319)
T 3olq_A 96 HN---RP---YEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKCPAPVW 146 (319)
T ss_dssp CS---CH---HHHHHHHHHHHTCSEEEEEEBCC--CCSCBCCHHHHHHHHHCSSCEE
T ss_pred cC---Ch---HHHHHHHHHhcCCCEEEEecCcCchhhcccccccHHHHHhcCCCCEE
Confidence 21 22 46788888888999999998764432 35577788888888865
No 27
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=90.49 E-value=3.2 Score=35.47 Aligned_cols=98 Identities=20% Similarity=0.160 Sum_probs=64.2
Q ss_pred CCCHHhHHHHHHHHHhhhhCCCceEEEEeeCCch----------------hHHHHHHHHH------CCCCEEEEEeeCCC
Q 025565 34 SMNPFCEIALEEALRIKESGLASEVVAVSMGPAQ----------------CVDTLRTGLA------MGADRGVHVEAAGQ 91 (251)
Q Consensus 34 ~in~~d~~Ale~A~~lae~~~g~~V~al~~G~~~----------------~~~~l~~~la------~GaD~vi~v~~~~~ 91 (251)
--++.+..+++.|.+++.. .+.+++.+.+-+.. +++.++++++ .|.+--+.+.. +
T Consensus 179 D~s~~s~~al~~a~~la~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--g 255 (309)
T 3cis_A 179 DGSSASELATAIAFDEASR-RNVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAITRVVVR--D 255 (309)
T ss_dssp CSSHHHHHHHHHHHHHHHH-TTCCEEEEEESCSSCCTTCSSCCHHHHHHHHHHHHHHHHTTHHHHCTTSCEEEEEES--S
T ss_pred CCChHHHHHHHHHHHHHHh-cCCEEEEEEEeecccccCCCcccHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEEEc--C
Confidence 3467889999999999987 67899998875431 1222333332 36654444432 1
Q ss_pred CCHHHHHHHHHHHHHHhCCCEEEEcceeecCC----cCcHHHHHHHHcCCCcc
Q 025565 92 LYPLTVAKILKSLVEVEKPGLIILGKQAIDDD----CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 92 ~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 140 (251)
++ +..|.+.++ ++|+|++|....++- -|.++-++.....+|++
T Consensus 256 -~~---~~~I~~~a~--~adliV~G~~~~~~~~~~l~Gsv~~~vl~~~~~pVl 302 (309)
T 3cis_A 256 -QP---ARQLVQRSE--EAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVI 302 (309)
T ss_dssp -CH---HHHHHHHHT--TCSEEEEESSCSSCCTTCSSCHHHHHHHHHCSSCEE
T ss_pred -CH---HHHHHHhhC--CCCEEEECCCCCCCccccccCcHHHHHHhcCCCCEE
Confidence 33 466777776 899999999764432 34567777777777754
No 28
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=90.42 E-value=2.5 Score=33.80 Aligned_cols=78 Identities=17% Similarity=0.236 Sum_probs=53.9
Q ss_pred EEEEeeCCch----hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHH
Q 025565 58 VVAVSMGPAQ----CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAG 133 (251)
Q Consensus 58 V~al~~G~~~----~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~ 133 (251)
-+++.||+.+ ++++...+-.+|..--+.|.. .+..++.+-+.+.++-++.++++|+++. |..+.+|+.+|.
T Consensus 4 ~V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~s-aHR~p~~~~~~~~~a~~~~~~~ViIa~A----G~aa~LpgvvA~ 78 (159)
T 3rg8_A 4 LVIILMGSSSDMGHAEKIASELKTFGIEYAIRIGS-AHKTAEHVVSMLKEYEALDRPKLYITIA----GRSNALSGFVDG 78 (159)
T ss_dssp EEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECC-TTTCHHHHHHHHHHHHTSCSCEEEEEEC----CSSCCHHHHHHH
T ss_pred eEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEc-ccCCHHHHHHHHHHhhhcCCCcEEEEEC----CchhhhHHHHHh
Confidence 3677888865 344555566899886566653 3456665555544443323699999988 345789999999
Q ss_pred HcCCCcc
Q 025565 134 LLSWPQG 140 (251)
Q Consensus 134 ~Lg~p~v 140 (251)
.-..|+|
T Consensus 79 ~t~~PVI 85 (159)
T 3rg8_A 79 FVKGATI 85 (159)
T ss_dssp HSSSCEE
T ss_pred ccCCCEE
Confidence 9999987
No 29
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=88.54 E-value=4.1 Score=32.90 Aligned_cols=78 Identities=17% Similarity=0.123 Sum_probs=53.7
Q ss_pred eEEEEeeCCch----hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHH
Q 025565 57 EVVAVSMGPAQ----CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVA 132 (251)
Q Consensus 57 ~V~al~~G~~~----~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA 132 (251)
..+++.||+.+ ++++...+-.+|++--+.|.. .+..++.+-+.. +-.+..++++|+++.. ..+.+|+.+|
T Consensus 13 P~V~IimGS~SD~~v~~~a~~~l~~~gi~~ev~V~s-aHR~p~~l~~~~-~~a~~~g~~ViIa~AG----~aahLpgvvA 86 (173)
T 4grd_A 13 PLVGVLMGSSSDWDVMKHAVAILQEFGVPYEAKVVS-AHRMPDEMFDYA-EKARERGLRAIIAGAG----GAAHLPGMLA 86 (173)
T ss_dssp CSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTSHHHHHHHH-HHHTTTTCSEEEEEEE----SSCCHHHHHH
T ss_pred CeEEEEeCcHhHHHHHHHHHHHHHHcCCCEEEEEEc-cccCHHHHHHHH-HHHHhcCCeEEEEecc----ccccchhhhe
Confidence 45788899865 455566677899885555542 244555443332 3334468999998883 4578999999
Q ss_pred HHcCCCcc
Q 025565 133 GLLSWPQG 140 (251)
Q Consensus 133 ~~Lg~p~v 140 (251)
.....|+|
T Consensus 87 ~~t~~PVI 94 (173)
T 4grd_A 87 AKTTVPVL 94 (173)
T ss_dssp HHCCSCEE
T ss_pred ecCCCCEE
Confidence 99999976
No 30
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=88.53 E-value=3.3 Score=34.40 Aligned_cols=100 Identities=17% Similarity=0.017 Sum_probs=66.7
Q ss_pred ccCCCHHhHHHHHHHHHhhhhCCCceEEEEeeCCch--hHH----HHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHH
Q 025565 32 KMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQ--CVD----TLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLV 105 (251)
Q Consensus 32 ~~~in~~d~~Ale~A~~lae~~~g~~V~al~~G~~~--~~~----~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~i 105 (251)
..-.++.+..+++.|.+++.. .+.+++.+.+.+.. .++ ..+.+...|.+--+++.. + ++ +..|.+.+
T Consensus 160 ~~d~s~~~~~al~~a~~la~~-~~a~l~ll~v~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~--g-~~---~~~i~~~a 232 (268)
T 3ab8_A 160 GYDASESAVRALHALAPLARA-LGLGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLG--G-DA---ADHLLRLQ 232 (268)
T ss_dssp ECCSCHHHHHHHHHHHHHHHH-HTCCEEEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEEEEC--S-CH---HHHHHHHC
T ss_pred EECCCHHHHHHHHHHHHhhhc-CCCEEEEEEEcCcHHHHHHHHHHHHHHHHHcCCceEEEEeC--C-Ch---HHHHHHHH
Confidence 334578888999999999987 57789999888752 122 233344568764444432 1 33 46777777
Q ss_pred HHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 106 EVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 106 k~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
++. |+|++|......--|.++-.+.....+|++
T Consensus 233 ~~~--dliV~G~~~~~~~~Gs~~~~vl~~~~~pvl 265 (268)
T 3ab8_A 233 GPG--DLLALGAPVRRLVFGSTAERVIRNAQGPVL 265 (268)
T ss_dssp CTT--EEEEEECCCSCCSSCCHHHHHHHHCSSCEE
T ss_pred HhC--CEEEECCcccccEeccHHHHHHhcCCCCEE
Confidence 765 999999922222346688888888888864
No 31
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=88.47 E-value=3.1 Score=35.18 Aligned_cols=81 Identities=10% Similarity=0.036 Sum_probs=50.9
Q ss_pred CCHHhHHHHHHHH---HhhhhCCCceEEE--EeeCCc--------hhHHHHHHHHHCCCCEEEEEeeCC--CCCHHHHHH
Q 025565 35 MNPFCEIALEEAL---RIKESGLASEVVA--VSMGPA--------QCVDTLRTGLAMGADRGVHVEAAG--QLYPLTVAK 99 (251)
Q Consensus 35 in~~d~~Ale~A~---~lae~~~g~~V~a--l~~G~~--------~~~~~l~~~la~GaD~vi~v~~~~--~~d~~a~a~ 99 (251)
-.|.|+. +..+- +++++ |.+|.. +|-|.. ...|..+.+-.+|++..+.+.-+. ..+......
T Consensus 11 aHPDDe~-l~~Ggtia~~~~~--G~~V~vv~lT~G~~g~~~~~~~R~~E~~~A~~~LGv~~~~~L~~~D~~~~~~~~~~~ 87 (242)
T 2ixd_A 11 AHADDVE-IGMAGTIAKYTKQ--GYEVGICDLTEADLSSNGTIELRKEEAKVAARIMGVKTRLNLAMPDRGLYMKEEYIR 87 (242)
T ss_dssp SSTTHHH-HHHHHHHHHHHHT--TCCEEEEEEECCTTCSSSCHHHHHHHHHHHHHHHTCCEEEEEEECTTCCCCCHHHHH
T ss_pred eCCChHH-HhHHHHHHHHHHC--CCeEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHcCCCeEEECCCCCCCCCChHHHHH
Confidence 4676644 33333 33343 555554 454532 124555666678999776666432 234567889
Q ss_pred HHHHHHHHhCCCEEEEcce
Q 025565 100 ILKSLVEVEKPGLIILGKQ 118 (251)
Q Consensus 100 ~La~~ik~~~~dlIl~G~~ 118 (251)
.|++++++.+||+|++...
T Consensus 88 ~l~~~ir~~~PdvV~t~~~ 106 (242)
T 2ixd_A 88 EIVKVIRTYKPKLVFAPYY 106 (242)
T ss_dssp HHHHHHHHHCCSEEEEECS
T ss_pred HHHHHHHHcCCCEEEECCC
Confidence 9999999999999998764
No 32
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=87.95 E-value=3.1 Score=33.88 Aligned_cols=77 Identities=17% Similarity=0.073 Sum_probs=53.0
Q ss_pred EEEEeeCCchh----HHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHH
Q 025565 58 VVAVSMGPAQC----VDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAG 133 (251)
Q Consensus 58 V~al~~G~~~~----~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~ 133 (251)
.+++.||..+. +++...+-.+|..--+.|-. ....|+.+-+ +++-.++.++++|++|. |..+.+|+.+|.
T Consensus 24 ~V~IimGS~SD~~v~~~a~~~L~~~gI~~e~~V~S-AHRtp~~l~~-~~~~a~~~g~~ViIa~A----G~aahLpGvvAa 97 (181)
T 4b4k_A 24 LVGVIMGSTSDWETMKYACDILDELNIPYEKKVVS-AHRTPDYMFE-YAETARERGLKVIIAGA----GGAAHLPGMVAA 97 (181)
T ss_dssp SEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTSHHHHHH-HHHHTTTTTCCEEEEEE----CSSCCHHHHHHT
T ss_pred cEEEEECCHhHHHHHHHHHHHHHHcCCCeeEEEEc-cccChHHHHH-HHHHHHhcCceEEEEec----cccccchhhHHh
Confidence 58899999763 34445556699885555542 2456665433 33333445899999997 356789999999
Q ss_pred HcCCCcc
Q 025565 134 LLSWPQG 140 (251)
Q Consensus 134 ~Lg~p~v 140 (251)
.-..|+|
T Consensus 98 ~T~~PVI 104 (181)
T 4b4k_A 98 KTNLPVI 104 (181)
T ss_dssp TCCSCEE
T ss_pred cCCCCEE
Confidence 9999876
No 33
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=87.72 E-value=3.6 Score=34.12 Aligned_cols=96 Identities=17% Similarity=0.147 Sum_probs=61.0
Q ss_pred CHHhHHHHHHHHHhhhhCCCceEEEEeeCCch-------------------------------hHHHHHH----HHHCCC
Q 025565 36 NPFCEIALEEALRIKESGLASEVVAVSMGPAQ-------------------------------CVDTLRT----GLAMGA 80 (251)
Q Consensus 36 n~~d~~Ale~A~~lae~~~g~~V~al~~G~~~-------------------------------~~~~l~~----~la~Ga 80 (251)
++.+..|++.|.+++.. .|.+++.+.+-+.. +++.+.+ +-..|.
T Consensus 10 s~~s~~al~~A~~lA~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~ 88 (268)
T 3ab8_A 10 SPQARGAEALAEWLAYK-LSAPLTVLFVVDTRLARIPELLDFGALTVPVPVLRTELERALALRGEAVLERVRQSALAAGV 88 (268)
T ss_dssp CGGGHHHHHHHHHHHHH-HTCCEEEEEEEEHHHHTHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHH-hCCcEEEEEEeccCCcccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 56688999999999987 57788888653211 0111222 334676
Q ss_pred CEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeec-C----CcCcHHHHHHHHcCCCcc
Q 025565 81 DRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAID-D----DCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 81 D~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d-~----~~~~v~~~lA~~Lg~p~v 140 (251)
+--..+... ++ +..|.+. +.++|+|++|....+ + --|.++-++......|++
T Consensus 89 ~~~~~~~~g---~~---~~~I~~~--~~~~dliV~G~~g~~~~~~~~~~Gs~~~~v~~~a~~PVl 145 (268)
T 3ab8_A 89 AVEAVLEEG---VP---HEAILRR--ARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASPVPVL 145 (268)
T ss_dssp CEEEEEEEE---CH---HHHHHHH--HTTCSEEEEESSCTTSCTTCCSCCHHHHHHHHHCSSCEE
T ss_pred CeEEEEecC---CH---HHHHHhh--ccCCCEEEEeccCCCccccccccchhHHHHHHhCCCCEE
Confidence 633333311 22 3556666 679999999987544 2 235678888888888864
No 34
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=87.24 E-value=3.1 Score=34.66 Aligned_cols=50 Identities=8% Similarity=0.001 Sum_probs=37.0
Q ss_pred HHHHHHHHHCCCCEEEEEeeCC--CCCHHHHHHHHHHHHHHhCCCEEEEcce
Q 025565 69 VDTLRTGLAMGADRGVHVEAAG--QLYPLTVAKILKSLVEVEKPGLIILGKQ 118 (251)
Q Consensus 69 ~~~l~~~la~GaD~vi~v~~~~--~~d~~a~a~~La~~ik~~~~dlIl~G~~ 118 (251)
.+..+.+..+|++..+.+.-+. ..+.......|++++++.+||+|++...
T Consensus 53 ~E~~~A~~~lG~~~~~~l~~~D~~l~~~~~~~~~l~~~ir~~~P~~V~t~~~ 104 (227)
T 1uan_A 53 KEVAEASRILGLDFRGNLGFPDGGLADVPEQRLKLAQALRRLRPRVVFAPLE 104 (227)
T ss_dssp HHHHHHHHHHTCSEEEEEEECTTCCCCCHHHHHHHHHHHHHHCEEEEEEECS
T ss_pred HHHHHHHHhcCCCeEEECCCCCCCCCChHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 4555566678999877666432 2345678899999999999999998753
No 35
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=85.75 E-value=2.6 Score=39.82 Aligned_cols=36 Identities=22% Similarity=0.154 Sum_probs=23.4
Q ss_pred HHHHHHHHhCCCEEEEcceeecCCcCcHHHHH---HHHcCCCcc
Q 025565 100 ILKSLVEVEKPGLIILGKQAIDDDCNQTGQMV---AGLLSWPQG 140 (251)
Q Consensus 100 ~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~l---A~~Lg~p~v 140 (251)
.+.+.+++.+|||++.|. .++.++-.+ |.+||+|++
T Consensus 429 ~l~~~i~~~~pDLlig~s-----~~k~~a~~~~~~~~~~giP~i 467 (523)
T 3u7q_B 429 HLRSLVFTDKPDFMIGNS-----YGKFIQRDTLHKGKEFEVPLI 467 (523)
T ss_dssp HHHHHHHHTCCSEEEECT-----THHHHHHHHHHHCGGGCCCEE
T ss_pred HHHHHHHhcCCCEEEECc-----cHHHHHHHhhcccccCCCceE
Confidence 455667778999999876 223344333 444499986
No 36
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=85.74 E-value=3.2 Score=35.42 Aligned_cols=88 Identities=14% Similarity=0.167 Sum_probs=55.8
Q ss_pred HhHHHHHHHHHhhhhCC--CceEEEEeeCCch-----------------------hHHHHHHH-HHCCCCEE-EEEeeCC
Q 025565 38 FCEIALEEALRIKESGL--ASEVVAVSMGPAQ-----------------------CVDTLRTG-LAMGADRG-VHVEAAG 90 (251)
Q Consensus 38 ~d~~Ale~A~~lae~~~--g~~V~al~~G~~~-----------------------~~~~l~~~-la~GaD~v-i~v~~~~ 90 (251)
++..+++.|.+++.. . +.+++.+.+-+.. +.+.+++. -.+|.+.+ +++...
T Consensus 175 ~s~~al~~a~~la~~-~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~g- 252 (319)
T 3olq_A 175 LNLKLIELTNDLSHR-IQKDPDVHLLSAYPVAPINIAIELPDFDPNLYNNALRGQHLIAMKELRQKFSIPEEKTHVKEG- 252 (319)
T ss_dssp HHHHHHHHHHHHHHH-HCSSCCEEEEEEECCCSCSCCTTCTTCCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEES-
T ss_pred HHHHHHHHHHHHHHh-ccCCCeEEEEEeecCcchhhhccCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCcccEEEecC-
Confidence 678999999999987 5 7789888763321 12333333 34676421 223221
Q ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHH
Q 025565 91 QLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVA 132 (251)
Q Consensus 91 ~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA 132 (251)
++ +..|.+.+++.++|+|++|....++-.+.+-+-++
T Consensus 253 --~~---~~~I~~~a~~~~~dLiV~G~~g~~~~~~~~~Gsv~ 289 (319)
T 3olq_A 253 --LP---EQVIPQVCEELNAGIVVLGILGRTGLSAAFLGNTA 289 (319)
T ss_dssp --CH---HHHHHHHHHHTTEEEEEEECCSCCSTHHHHHHHHH
T ss_pred --Cc---HHHHHHHHHHhCCCEEEEeccCccCCccccccHHH
Confidence 33 57888999999999999999765544333333333
No 37
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=85.66 E-value=9.4 Score=30.83 Aligned_cols=77 Identities=19% Similarity=0.169 Sum_probs=53.3
Q ss_pred EEEEeeCCch----hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHH
Q 025565 58 VVAVSMGPAQ----CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAG 133 (251)
Q Consensus 58 V~al~~G~~~----~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~ 133 (251)
-+++.||+.+ ++++...+-.+|..--+.|.. .+..++..-+.+.+ .++.+.++|+++.. ..+.+|+.+|.
T Consensus 9 ~V~IimgS~SD~~v~~~a~~~L~~~gi~~ev~V~S-aHR~p~~~~~~~~~-a~~~g~~ViIa~AG----~aa~LpgvvA~ 82 (174)
T 3lp6_A 9 RVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVS-AHRTPEAMFSYARG-AAARGLEVIIAGAG----GAAHLPGMVAA 82 (174)
T ss_dssp SEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTCHHHHHHHHHH-HHHHTCCEEEEEEE----SSCCHHHHHHH
T ss_pred eEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEC-CCCCHHHHHHHHHH-HHhCCCCEEEEecC----chhhhHHHHHh
Confidence 3677888865 344555666899986666653 24566655554433 34458889998883 45789999999
Q ss_pred HcCCCcc
Q 025565 134 LLSWPQG 140 (251)
Q Consensus 134 ~Lg~p~v 140 (251)
.-..|+|
T Consensus 83 ~t~~PVI 89 (174)
T 3lp6_A 83 ATPLPVI 89 (174)
T ss_dssp HCSSCEE
T ss_pred ccCCCEE
Confidence 9999976
No 38
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=84.39 E-value=5.1 Score=34.14 Aligned_cols=97 Identities=10% Similarity=-0.004 Sum_probs=62.2
Q ss_pred CCHHhHHHHHHHHHhhhhCCCceEEEEeeCCc--------------------hhHHHHHH----HHHC-----CCCEEEE
Q 025565 35 MNPFCEIALEEALRIKESGLASEVVAVSMGPA--------------------QCVDTLRT----GLAM-----GADRGVH 85 (251)
Q Consensus 35 in~~d~~Ale~A~~lae~~~g~~V~al~~G~~--------------------~~~~~l~~----~la~-----GaD~vi~ 85 (251)
-++.+..|++.|.+|+.. .+.+++.+.+-+. .+++.+++ +-.. |.+--..
T Consensus 28 ~s~~s~~al~~A~~lA~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 106 (309)
T 3cis_A 28 DSPAAQVAVRWAARDAEL-RKIPLTLVHAVSPEVATWLEVPLPPGVLRWQQDHGRHLIDDALKVVEQASLRAGPPTVHSE 106 (309)
T ss_dssp SSHHHHHHHHHHHHHHHH-HTCCEEEEEECCCCCCCTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCSSSCCSCEEEE
T ss_pred CCHHHHHHHHHHHHHHHh-cCCcEEEEEEecCcccccccCCCCchhhHHHHHHHHHHHHHHHHHHHHhcccCCCceEEEE
Confidence 467889999999999987 5788888865431 01112222 2222 6654444
Q ss_pred EeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecC----CcCcHHHHHHHHcCCCcc
Q 025565 86 VEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDD----DCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 86 v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~----~~~~v~~~lA~~Lg~p~v 140 (251)
+.. + ++ +..|.+.++ ++|+|++|....++ --|.++-++......|++
T Consensus 107 ~~~--g-~~---~~~I~~~a~--~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PVl 157 (309)
T 3cis_A 107 IVP--A-AA---VPTLVDMSK--DAVLMVVGCLGSGRWPGRLLGSVSSGLLRHAHCPVV 157 (309)
T ss_dssp EES--S-CH---HHHHHHHGG--GEEEEEEESSCTTCCTTCCSCHHHHHHHHHCSSCEE
T ss_pred Eec--C-CH---HHHHHHHhc--CCCEEEECCCCCccccccccCcHHHHHHHhCCCCEE
Confidence 432 1 32 356666655 89999999875443 235677888888888865
No 39
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=84.21 E-value=8.4 Score=30.99 Aligned_cols=77 Identities=13% Similarity=0.110 Sum_probs=53.5
Q ss_pred EEEEeeCCch----hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHH
Q 025565 58 VVAVSMGPAQ----CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAG 133 (251)
Q Consensus 58 V~al~~G~~~----~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~ 133 (251)
-+++.||+.+ ++++...+-.+|..--+.|.. .+..++..-+.+ +-.++.+.++|+++. |..+.+|+.+|.
T Consensus 8 ~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~S-aHR~p~~~~~~~-~~a~~~g~~ViIa~A----G~aa~LpgvvA~ 81 (169)
T 3trh_A 8 FVAILMGSDSDLSTMETAFTELKSLGIPFEAHILS-AHRTPKETVEFV-ENADNRGCAVFIAAA----GLAAHLAGTIAA 81 (169)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTSHHHHHHHH-HHHHHTTEEEEEEEE----CSSCCHHHHHHH
T ss_pred cEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEc-ccCCHHHHHHHH-HHHHhCCCcEEEEEC----ChhhhhHHHHHh
Confidence 4678888865 344555666899986666653 245566554433 333445888999887 345789999999
Q ss_pred HcCCCcc
Q 025565 134 LLSWPQG 140 (251)
Q Consensus 134 ~Lg~p~v 140 (251)
.-..|+|
T Consensus 82 ~t~~PVI 88 (169)
T 3trh_A 82 HTLKPVI 88 (169)
T ss_dssp TCSSCEE
T ss_pred cCCCCEE
Confidence 9999976
No 40
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=83.70 E-value=1 Score=38.30 Aligned_cols=98 Identities=14% Similarity=0.005 Sum_probs=60.6
Q ss_pred CCHHhHHHHHHHHHhhhhCCCceEEEEeeCCch---------------------hHHHH----HHHHHCCCCEEE-EEee
Q 025565 35 MNPFCEIALEEALRIKESGLASEVVAVSMGPAQ---------------------CVDTL----RTGLAMGADRGV-HVEA 88 (251)
Q Consensus 35 in~~d~~Ale~A~~lae~~~g~~V~al~~G~~~---------------------~~~~l----~~~la~GaD~vi-~v~~ 88 (251)
-++.+..|++.|.+|+.. .+.+++++.+-+.. +++.+ +.+...|.+--. .+..
T Consensus 31 ~s~~s~~al~~A~~lA~~-~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~v~~ 109 (294)
T 3loq_A 31 LSENSFKVLEYLGDFKKV-GVEEIGVLFVINLTKLSTVSGGIDIDHYIDEMSEKAEEVLPEVAQKIEAAGIKAEVIKPFP 109 (294)
T ss_dssp SCTGGGGGGGGHHHHHHT-TCCEEEEECCEECTTC-----CCCTTHHHHHHHHHHHHHHHHHHHHHHHTTCEEEECSSCC
T ss_pred CCHHHHHHHHHHHHHHhh-cCCEEEEEEEecCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceeEeec
Confidence 356788999999999998 68899988763311 12222 233346765333 2220
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCC----cCcHHHHHHHHcCCCcc
Q 025565 89 AGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDD----CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 89 ~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 140 (251)
.-++ +..| .+++.++|+|++|....++- -|.++-++......|++
T Consensus 110 --~g~~---~~~I--~a~~~~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PVl 158 (294)
T 3loq_A 110 --AGDP---VVEI--IKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSKVPVY 158 (294)
T ss_dssp --EECH---HHHH--HHHHTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCSSCEE
T ss_pred --cCCh---hHhe--eeccCCCCEEEEcCCCCccccceeeccHHHHHHhcCCCCEE
Confidence 1123 3455 67778999999998643321 14567777777777754
No 41
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=82.63 E-value=8 Score=30.93 Aligned_cols=76 Identities=21% Similarity=0.163 Sum_probs=50.8
Q ss_pred EEEeeCCch----hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHH
Q 025565 59 VAVSMGPAQ----CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGL 134 (251)
Q Consensus 59 ~al~~G~~~----~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~ 134 (251)
+++.||+.+ ++++...+-.+|..--+.+.. .+..++..-+.+ +-.++.+.++|+++.. ..+.+|+.+|..
T Consensus 6 V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~S-aHR~p~~~~~~~-~~a~~~g~~ViIa~AG----~aa~LpgvvA~~ 79 (163)
T 3ors_A 6 VAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVS-AHRTPKMMVQFA-SEARERGINIIIAGAG----GAAHLPGMVASL 79 (163)
T ss_dssp EEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTSHHHHHHHH-HHTTTTTCCEEEEEEE----SSCCHHHHHHHH
T ss_pred EEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEC-CcCCHHHHHHHH-HHHHhCCCcEEEEECC----chhhhHHHHHhc
Confidence 677888765 344555566799986666653 244555443332 2233457899998883 457899999999
Q ss_pred cCCCcc
Q 025565 135 LSWPQG 140 (251)
Q Consensus 135 Lg~p~v 140 (251)
-..|+|
T Consensus 80 t~~PVI 85 (163)
T 3ors_A 80 TTLPVI 85 (163)
T ss_dssp CSSCEE
T ss_pred cCCCEE
Confidence 999976
No 42
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=81.56 E-value=11 Score=30.63 Aligned_cols=77 Identities=16% Similarity=0.099 Sum_probs=51.1
Q ss_pred EEEEeeCCch----hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHH
Q 025565 58 VVAVSMGPAQ----CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAG 133 (251)
Q Consensus 58 V~al~~G~~~----~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~ 133 (251)
-+++.||+.+ .+++...+-.+|..--+.|.. .+..++..-+.+ +-.++.+.++|+++.. ..+.+|+.+|.
T Consensus 23 ~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~S-aHR~p~~l~~~~-~~a~~~g~~ViIa~AG----~aa~LpgvvA~ 96 (182)
T 1u11_A 23 VVGIIMGSQSDWETMRHADALLTELEIPHETLIVS-AHRTPDRLADYA-RTAAERGLNVIIAGAG----GAAHLPGMCAA 96 (182)
T ss_dssp SEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTCHHHHHHHH-HHTTTTTCCEEEEEEE----SSCCHHHHHHH
T ss_pred EEEEEECcHHHHHHHHHHHHHHHHcCCCeEEEEEc-ccCCHHHHHHHH-HHHHhCCCcEEEEecC----chhhhHHHHHh
Confidence 3677888765 345556667899986666653 244555443322 2223346899998873 45789999999
Q ss_pred HcCCCcc
Q 025565 134 LLSWPQG 140 (251)
Q Consensus 134 ~Lg~p~v 140 (251)
.-..|+|
T Consensus 97 ~t~~PVI 103 (182)
T 1u11_A 97 WTRLPVL 103 (182)
T ss_dssp HCSSCEE
T ss_pred ccCCCEE
Confidence 9999976
No 43
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=81.08 E-value=11 Score=30.67 Aligned_cols=78 Identities=19% Similarity=0.191 Sum_probs=53.4
Q ss_pred eEEEEeeCCch----hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHH
Q 025565 57 EVVAVSMGPAQ----CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVA 132 (251)
Q Consensus 57 ~V~al~~G~~~----~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA 132 (251)
..+++.||+.+ ++++...+-.+|..--+.|.. ....+..+.+.+.+ .++.+.++|+++.. ..+.+|+.+|
T Consensus 14 ~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~S-aHR~p~~l~~~~~~-a~~~g~~ViIa~AG----~aa~LpgvvA 87 (183)
T 1o4v_A 14 PRVGIIMGSDSDLPVMKQAAEILEEFGIDYEITIVS-AHRTPDRMFEYAKN-AEERGIEVIIAGAG----GAAHLPGMVA 87 (183)
T ss_dssp CEEEEEESCGGGHHHHHHHHHHHHHTTCEEEEEECC-TTTCHHHHHHHHHH-TTTTTCCEEEEEEE----SSCCHHHHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHHHHHcCCCeEEEEEc-ccCCHHHHHHHHHH-HHhCCCcEEEEecC----cccccHHHHH
Confidence 56888999865 445556677899986666653 24456554333322 23347899998883 4578999999
Q ss_pred HHcCCCcc
Q 025565 133 GLLSWPQG 140 (251)
Q Consensus 133 ~~Lg~p~v 140 (251)
..-..|+|
T Consensus 88 ~~t~~PVI 95 (183)
T 1o4v_A 88 SITHLPVI 95 (183)
T ss_dssp HHCSSCEE
T ss_pred hccCCCEE
Confidence 99999976
No 44
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=80.51 E-value=7.7 Score=36.31 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=25.6
Q ss_pred HHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 100 ILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 100 ~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
.+.+.+++.+||+++.+. ..-.+|.++|+|++
T Consensus 363 el~~~i~~~~pDl~ig~~---------~~r~~a~k~gip~~ 394 (511)
T 2xdq_B 363 VVGDAIARVEPAAIFGTQ---------MERHVGKRLNIPCG 394 (511)
T ss_dssp HHHHHHHHHCCSEEEECH---------HHHHHHHHHTCCEE
T ss_pred HHHHHHHhcCCCEEEecc---------chHHHHHhcCCCeE
Confidence 566778888999999544 56778899999986
No 45
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=80.40 E-value=15 Score=32.46 Aligned_cols=90 Identities=10% Similarity=0.001 Sum_probs=54.4
Q ss_pred HHHHHHHhhhhCCCceEEEEeeC--------CchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEE
Q 025565 42 ALEEALRIKESGLASEVVAVSMG--------PAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLI 113 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G--------~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlI 113 (251)
.+..+.+.+.+ .|.+|..-..- ++...+.++.+..+|+|++.+.+.-....|..+.+.+..+.+.. |++.
T Consensus 138 ~~~~~v~~ak~-~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~-p~~~ 215 (337)
T 3ble_A 138 DVSFVIEYAIK-SGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKY-PDIH 215 (337)
T ss_dssp HHHHHHHHHHH-TTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHC-TTSC
T ss_pred HHHHHHHHHHH-CCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhc-CCCe
Confidence 34444555444 56676644433 22345578889999999988876444678999999888887766 3443
Q ss_pred EEcceeecCCcCcHHHHHHHH
Q 025565 114 ILGKQAIDDDCNQTGQMVAGL 134 (251)
Q Consensus 114 l~G~~s~d~~~~~v~~~lA~~ 134 (251)
|--+.-.| .+-.++-.+|+.
T Consensus 216 i~~H~Hnd-~GlA~AN~laAv 235 (337)
T 3ble_A 216 FEFHGHND-YDLSVANSLQAI 235 (337)
T ss_dssp EEEECBCT-TSCHHHHHHHHH
T ss_pred EEEEecCC-cchHHHHHHHHH
Confidence 33333323 334455555543
No 46
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=79.66 E-value=11 Score=30.25 Aligned_cols=77 Identities=18% Similarity=0.135 Sum_probs=51.9
Q ss_pred EEEEeeCCch----hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHH
Q 025565 58 VVAVSMGPAQ----CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAG 133 (251)
Q Consensus 58 V~al~~G~~~----~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~ 133 (251)
-+++.||+.+ ++++...+-.+|..--+.+.. .+..++.+-+.+.++ ++.+.++|+++. |..+.+|+.+|.
T Consensus 7 ~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~S-aHRtp~~l~~~~~~~-~~~g~~ViIa~A----G~aa~LpgvvA~ 80 (166)
T 3oow_A 7 QVGVIMGSKSDWSTMKECCDILDNLGIGYECEVVS-AHRTPDKMFDYAETA-KERGLKVIIAGA----GGAAHLPGMVAA 80 (166)
T ss_dssp EEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECC-TTTCHHHHHHHHHHT-TTTTCCEEEEEE----CSSCCHHHHHHH
T ss_pred eEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEc-CcCCHHHHHHHHHHH-HhCCCcEEEEEC----CcchhhHHHHHh
Confidence 4678888865 344555566799876555553 244565444433322 334689999888 345789999999
Q ss_pred HcCCCcc
Q 025565 134 LLSWPQG 140 (251)
Q Consensus 134 ~Lg~p~v 140 (251)
.-..|+|
T Consensus 81 ~t~~PVI 87 (166)
T 3oow_A 81 KTTLPVL 87 (166)
T ss_dssp TCSSCEE
T ss_pred ccCCCEE
Confidence 9999976
No 47
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=79.59 E-value=9.9 Score=33.06 Aligned_cols=47 Identities=11% Similarity=0.158 Sum_probs=34.5
Q ss_pred HHHHHHHHHCCCCEEEEEe----e-CCCC--------------CHHHHHHHHHHHHHHhCCCEEEE
Q 025565 69 VDTLRTGLAMGADRGVHVE----A-AGQL--------------YPLTVAKILKSLVEVEKPGLIIL 115 (251)
Q Consensus 69 ~~~l~~~la~GaD~vi~v~----~-~~~~--------------d~~a~a~~La~~ik~~~~dlIl~ 115 (251)
.+..+.+..+|++.++++. - |..+ +.......|++++++.+||+|++
T Consensus 70 ~E~~~A~~~LGv~~~~~L~~~~~~~D~~l~~~~~~~~p~~~~~~~~~~~~~l~~~ir~~rP~vV~t 135 (303)
T 1q74_A 70 GELTAALRALGVSAPIYLGGAGRWRDSGMAGTDQRSQRRFVDADPRQTVGALVAIIRELRPHVVVT 135 (303)
T ss_dssp HHHHHHHHHTTCCCCEETTSTTSSBCCCCC----CCSCBGGGSCHHHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHhCCCeeEECCCCCcCCCCCCCCCccccCcccccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 3455666678999866653 1 2222 56788999999999999999997
No 48
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=78.65 E-value=11 Score=30.35 Aligned_cols=77 Identities=17% Similarity=0.075 Sum_probs=50.9
Q ss_pred EEEEeeCCch----hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHH
Q 025565 58 VVAVSMGPAQ----CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAG 133 (251)
Q Consensus 58 V~al~~G~~~----~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~ 133 (251)
.+++.||+.+ ++++...+-.+|.+--+.|.. ....++.+-+. ++-.++.+.++|+++.. ..+.+|+.+|.
T Consensus 13 ~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~S-aHR~p~~l~~~-~~~a~~~g~~ViIa~AG----~aa~LpgvvA~ 86 (170)
T 1xmp_A 13 LVGVIMGSTSDWETMKYACDILDELNIPYEKKVVS-AHRTPDYMFEY-AETARERGLKVIIAGAG----GAAHLPGMVAA 86 (170)
T ss_dssp SEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTSHHHHHHH-HHHTTTTTCCEEEEEEE----SSCCHHHHHHT
T ss_pred cEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEe-ccCCHHHHHHH-HHHHHhCCCcEEEEECC----chhhhHHHHHh
Confidence 4678888865 345556667799986566553 24455544322 22223346899998873 45789999999
Q ss_pred HcCCCcc
Q 025565 134 LLSWPQG 140 (251)
Q Consensus 134 ~Lg~p~v 140 (251)
.-..|+|
T Consensus 87 ~t~~PVI 93 (170)
T 1xmp_A 87 KTNLPVI 93 (170)
T ss_dssp TCCSCEE
T ss_pred ccCCCEE
Confidence 9999976
No 49
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=78.56 E-value=11 Score=30.55 Aligned_cols=77 Identities=17% Similarity=0.100 Sum_probs=51.9
Q ss_pred EEEEeeCCch----hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHH
Q 025565 58 VVAVSMGPAQ----CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAG 133 (251)
Q Consensus 58 V~al~~G~~~----~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~ 133 (251)
-+++.||+.+ .+++...+-.+|..--+.|.. .+..++.+-+.+ +-.++.+.++|+++.. ..+.+|+.+|.
T Consensus 14 ~V~IimGS~SD~~v~~~a~~~L~~~Gi~~ev~V~S-aHR~p~~~~~~~-~~a~~~g~~ViIa~AG----~aa~LpgvvA~ 87 (174)
T 3kuu_A 14 KIAIVMGSKSDWATMQFAADVLTTLNVPFHVEVVS-AHRTPDRLFSFA-EQAEANGLHVIIAGNG----GAAHLPGMLAA 87 (174)
T ss_dssp CEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTCHHHHHHHH-HHTTTTTCSEEEEEEE----SSCCHHHHHHH
T ss_pred cEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEc-ccCCHHHHHHHH-HHHHhCCCcEEEEECC----hhhhhHHHHHh
Confidence 3677888865 344555566899986666653 244555444432 2233457899998883 45789999999
Q ss_pred HcCCCcc
Q 025565 134 LLSWPQG 140 (251)
Q Consensus 134 ~Lg~p~v 140 (251)
.-..|+|
T Consensus 88 ~t~~PVI 94 (174)
T 3kuu_A 88 KTLVPVL 94 (174)
T ss_dssp TCSSCEE
T ss_pred ccCCCEE
Confidence 9999976
No 50
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=77.89 E-value=16 Score=33.55 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=53.8
Q ss_pred eEEEEeeCCch----hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCC-CEEEEcceeecCCcCcHHHHH
Q 025565 57 EVVAVSMGPAQ----CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKP-GLIILGKQAIDDDCNQTGQMV 131 (251)
Q Consensus 57 ~V~al~~G~~~----~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~-dlIl~G~~s~d~~~~~v~~~l 131 (251)
..+++.||+.+ ++++...+-.+|..--+.|.. .+..+....+.. +-.++.+. ++|+++. |..+.+|+.+
T Consensus 266 ~~V~Ii~gs~SD~~~~~~a~~~l~~~gi~~~v~V~s-aHR~p~~~~~~~-~~~~~~g~~~viIa~A----G~~a~Lpgvv 339 (425)
T 2h31_A 266 CRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTS-AHKGPDETLRIK-AEYEGDGIPTVFVAVA----GRSNGLGPVM 339 (425)
T ss_dssp CEEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTCHHHHHHHH-HHHHTTCCCEEEEEEC----CSSCCHHHHH
T ss_pred CeEEEEecCcccHHHHHHHHHHHHHcCCceEEeeee-ccCCHHHHHHHH-HHHHHCCCCeEEEEEc----CcccchHhHH
Confidence 35778888865 455666677899986666653 245666554433 33344567 6888887 3457899999
Q ss_pred HHHcCCCcc
Q 025565 132 AGLLSWPQG 140 (251)
Q Consensus 132 A~~Lg~p~v 140 (251)
|..-..|+|
T Consensus 340 a~~t~~PVI 348 (425)
T 2h31_A 340 SGNTAYPVI 348 (425)
T ss_dssp HHHCSSCEE
T ss_pred hccCCCCEE
Confidence 999999987
No 51
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=76.17 E-value=13 Score=31.00 Aligned_cols=72 Identities=6% Similarity=-0.113 Sum_probs=50.5
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILG 116 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G 116 (251)
..+.|++|+++ |.+|+...-..+..++..+.+-..|-.+++.+..| -.|.+.+.+.+.++.++. +.|+++.-
T Consensus 21 G~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~G~iD~lvnn 93 (256)
T 4fs3_A 21 AFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQID-VQSDEEVINGFEQIGKDVGNIDGVYHS 93 (256)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECC-TTCHHHHHHHHHHHHHHHCCCSEEEEC
T ss_pred HHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEcc-CCCHHHHHHHHHHHHHHhCCCCEEEec
Confidence 35678888885 77888777766554555555555676666666544 567888888888888887 58988743
No 52
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=75.80 E-value=14 Score=33.37 Aligned_cols=129 Identities=12% Similarity=0.102 Sum_probs=71.7
Q ss_pred EEEEeeccCCCceEEecCC--CeEEccCCccCCCHHhHHHHHH---HHHhhhhCCCceEEEE--eeCCc-----------
Q 025565 5 VAIKRVVDYAVKIRVKSDR--TGVETNNVKMSMNPFCEIALEE---ALRIKESGLASEVVAV--SMGPA----------- 66 (251)
Q Consensus 5 V~~K~Vpd~~~~~~~~~~~--~~~~~~~~~~~in~~d~~Ale~---A~~lae~~~g~~V~al--~~G~~----------- 66 (251)
+.+++-||-+..+++..+- ..+-. +...-+|.+.+.+|. .-.+++. ...+|++| .+|-.
T Consensus 59 ~~~~~F~dGE~~v~i~esvrg~dV~i--iqs~~~~~nd~lmeLl~~idA~k~a-sA~rit~ViPY~~YaRQdr~~~r~~i 135 (379)
T 2ji4_A 59 VQVYQEPNRETRVQIQESVRGKDVFI--IQTVSKDVNTTIMELLIMVYACKTS-CAKSIIGVIPYFPYSKQCKMRKRGSI 135 (379)
T ss_dssp EEEEECTTSCEEEEECSCCTTCEEEE--ECCCCSCHHHHHHHHHHHHHHHHHT-TCSEEEEECSSCSSCCC-------CC
T ss_pred eEEEECCCCCEEEEeCCCcCCCEEEE--EeCCCCCccHHHHHHHHHHHHHHhc-CCceEEEEEeccCccccccccCCCcH
Confidence 3567788877666765331 11110 111223444444433 2234443 34578877 34432
Q ss_pred hhHHHHHHHHHCCCCEEEEEeeCC----C-C----CHHHHHHHHHHHHHHh--C-CCEEEEcceeecCCcCcHHHHHHHH
Q 025565 67 QCVDTLRTGLAMGADRGVHVEAAG----Q-L----YPLTVAKILKSLVEVE--K-PGLIILGKQAIDDDCNQTGQMVAGL 134 (251)
Q Consensus 67 ~~~~~l~~~la~GaD~vi~v~~~~----~-~----d~~a~a~~La~~ik~~--~-~dlIl~G~~s~d~~~~~v~~~lA~~ 134 (251)
.+.-.++.+..+|+|+++.++-.. . + |...-+..|++.+++. + -+.+++|- +..+-.++..+|.+
T Consensus 136 ~ak~vA~lL~~aGad~vit~DlHs~q~qgfF~ipvD~l~A~p~La~~I~~~~~~~~~~vVV~p---d~GGv~~A~~lA~~ 212 (379)
T 2ji4_A 136 VSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAK---SPASAKRAQSFAER 212 (379)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCSSGGGGGGSSSCEEEECCHHHHHHHHHHHSTTGGGEEEEES---SGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCCChhhccccCCceeeeccHHHHHHHHHHhcccCCCcEEEEE---ccchHHHHHHHHHH
Confidence 233345556679999999997422 1 1 2222356677777664 2 24566655 33556799999999
Q ss_pred cCCCc
Q 025565 135 LSWPQ 139 (251)
Q Consensus 135 Lg~p~ 139 (251)
||.|+
T Consensus 213 L~~pl 217 (379)
T 2ji4_A 213 LRLGI 217 (379)
T ss_dssp TTCEE
T ss_pred hCCCE
Confidence 99996
No 53
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=74.81 E-value=16 Score=30.36 Aligned_cols=73 Identities=10% Similarity=0.001 Sum_probs=51.4
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+.+.-..+..++..+++-..|..++..+..| -.|...+.+.+.++.++. ++|+++.-.
T Consensus 23 G~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lvnnA 96 (262)
T 3pk0_A 23 GRGIATVFARA--GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTD-VSDRAQCDALAGRAVEEFGGIDVVCANA 96 (262)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECC-TTSHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcC-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 45677888875 67888776665555555666666775667766644 567888888888888776 689888654
No 54
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=74.38 E-value=29 Score=29.86 Aligned_cols=87 Identities=14% Similarity=0.155 Sum_probs=52.1
Q ss_pred HHHHHHhhhhCCCceEEEE---eeCC--------chhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhC-C
Q 025565 43 LEEALRIKESGLASEVVAV---SMGP--------AQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEK-P 110 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al---~~G~--------~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~-~ 110 (251)
+..+.+.+.+ .|.+|.+- ++|+ +...+.++.+..+|+|.+.+.+.-....|..+.+.+..+.+..+ .
T Consensus 123 ~~~~i~~a~~-~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~ 201 (298)
T 2cw6_A 123 FDAILKAAQS-ANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLA 201 (298)
T ss_dssp HHHHHHHHHH-TTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGG
T ss_pred HHHHHHHHHH-CCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCC
Confidence 3444444444 56676532 2442 23455678889999998888764445789999998888877652 2
Q ss_pred CEEEEcceeecCCcCcHHHHHHH
Q 025565 111 GLIILGKQAIDDDCNQTGQMVAG 133 (251)
Q Consensus 111 dlIl~G~~s~d~~~~~v~~~lA~ 133 (251)
.+=+=++ +..+-.++-.+|+
T Consensus 202 ~i~~H~H---n~~Gla~An~laA 221 (298)
T 2cw6_A 202 ALAVHCH---DTYGQALANTLMA 221 (298)
T ss_dssp GEEEEEB---CTTSCHHHHHHHH
T ss_pred eEEEEEC---CCCchHHHHHHHH
Confidence 3444333 2233345554444
No 55
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=74.24 E-value=14 Score=32.32 Aligned_cols=38 Identities=29% Similarity=0.284 Sum_probs=28.0
Q ss_pred HHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 100 ILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 100 ~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
.+.+++++.+||+|++.. ..-.+..+|.++|+|++...
T Consensus 114 ~l~~~~~~~~pDlVv~d~------~~~~~~~~a~~~giP~v~~~ 151 (398)
T 4fzr_A 114 EALALAERWKPDLVLTET------YSLTGPLVAATLGIPWIEQS 151 (398)
T ss_dssp HHHHHHHHHCCSEEEEET------TCTHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHhCCCCEEEECc------cccHHHHHHHhhCCCEEEec
Confidence 566677888999998542 23457788889999988654
No 56
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=73.62 E-value=11 Score=32.95 Aligned_cols=88 Identities=17% Similarity=0.191 Sum_probs=52.0
Q ss_pred HHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCC-CCC---------------------HHHHHHH
Q 025565 43 LEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG-QLY---------------------PLTVAKI 100 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~-~~d---------------------~~a~a~~ 100 (251)
+..|..|+++ |.+|+.++-+ ...+.+ -+.|.. ++.+..+- ..+ .......
T Consensus 38 l~La~~L~~~--Gh~V~v~~~~--~~~~~~---~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (415)
T 3rsc_A 38 LTVVTELVRR--GHRVSYVTAG--GFAEPV---RAAGAT-VVPYQSEIIDADAAEVFGSDDLGVRPHLMYLRENVSVLRA 109 (415)
T ss_dssp HHHHHHHHHT--TCEEEEEECG--GGHHHH---HHTTCE-EEECCCSTTTCCHHHHHHSSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCH--HHHHHH---HhcCCE-EEeccccccccccchhhccccHHHHHHHHHHHHHHHHHHH
Confidence 5677778775 7789888833 223333 345755 33333211 111 0122344
Q ss_pred HHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 101 LKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 101 La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
+.+.+++.+||+|++.. .....+..+|.++|+|++...
T Consensus 110 l~~~l~~~~PDlVi~d~-----~~~~~~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 110 TAEALDGDVPDLVLYDD-----FPFIAGQLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHSSSCCSEEEEES-----TTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHhccCCCEEEECc-----hhhhHHHHHHHHhCCCEEEEE
Confidence 55666777899999642 122357788999999998765
No 57
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=73.35 E-value=22 Score=29.32 Aligned_cols=74 Identities=15% Similarity=0.078 Sum_probs=51.8
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcce
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGKQ 118 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~~ 118 (251)
-.+.|.+|+++ |.+|+.+.-..+..++..+++...+..++..+..| -.|...+.+++.++.++. +.|+++....
T Consensus 36 G~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-l~~~~~v~~~~~~~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 36 GSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCD-VTSTEAVDALITQTVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeC-CCCHHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 34677788875 67888776665555555666666676777777644 557888888888877776 6898887653
No 58
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=73.17 E-value=20 Score=30.57 Aligned_cols=75 Identities=13% Similarity=0.098 Sum_probs=53.4
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
--..+.|++|+++ |.+|+.+.-..+..++...++...|..++..+..| -.|...+...+.++.++. +.|+++.-.
T Consensus 52 GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 127 (293)
T 3rih_A 52 GIGRGIATVFARA--GANVAVAARSPRELSSVTAELGELGAGNVIGVRLD-VSDPGSCADAARTVVDAFGALDVVCANA 127 (293)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEe-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3445677888875 67888777766655666666667776677766644 567888888888888776 689888654
No 59
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=73.06 E-value=9.1 Score=35.63 Aligned_cols=32 Identities=19% Similarity=0.100 Sum_probs=25.1
Q ss_pred HHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 100 ILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 100 ~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
-+.+.+++.+|||++.|. -.-.+|.++|+|++
T Consensus 392 el~~~i~~~~pDL~ig~~---------~~~~~a~k~gIP~~ 423 (483)
T 3pdi_A 392 VLLKTVDEYQADILIAGG---------RNMYTALKGRVPFL 423 (483)
T ss_dssp HHHHHHHHTTCSEEECCG---------GGHHHHHHTTCCBC
T ss_pred HHHHHHHhcCCCEEEECC---------chhHHHHHcCCCEE
Confidence 455677888999999765 34478999999997
No 60
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=72.97 E-value=25 Score=33.37 Aligned_cols=93 Identities=15% Similarity=0.098 Sum_probs=56.8
Q ss_pred HHHHHHhhhhCCCceEE-EEe--eCC----chhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEE
Q 025565 43 LEEALRIKESGLASEVV-AVS--MGP----AQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIIL 115 (251)
Q Consensus 43 le~A~~lae~~~g~~V~-al~--~G~----~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~ 115 (251)
+..+.+.+.+ .|.+|. .++ .|+ +...+.++++..+|+|.+.+.+.-....|..+...+..+.+..++++.|-
T Consensus 146 i~~~i~~ak~-~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~ 224 (539)
T 1rqb_A 146 MAHAMAAVKK-AGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQIN 224 (539)
T ss_dssp HHHHHHHHHH-TTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEE
T ss_pred HHHHHHHHHH-CCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCCCceEE
Confidence 4455555554 466664 332 232 23456788899999998777664446789999998888877765355554
Q ss_pred cceeecCCcCcHHHHHHH-HcCC
Q 025565 116 GKQAIDDDCNQTGQMVAG-LLSW 137 (251)
Q Consensus 116 G~~s~d~~~~~v~~~lA~-~Lg~ 137 (251)
=++-.| .|-.++-.+|+ ..|+
T Consensus 225 ~H~Hnd-~GlAvAN~laAveAGa 246 (539)
T 1rqb_A 225 LHCHST-TGVTEVSLMKAIEAGV 246 (539)
T ss_dssp EEEBCT-TSCHHHHHHHHHHTTC
T ss_pred EEeCCC-CChHHHHHHHHHHhCC
Confidence 444434 34445555554 4444
No 61
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=72.95 E-value=23 Score=28.67 Aligned_cols=29 Identities=24% Similarity=0.064 Sum_probs=23.4
Q ss_pred HHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 103 SLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 103 ~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
+.+++.++++|+.|. +...+|.++|.|.+
T Consensus 136 ~~l~~~G~~vvVG~~---------~~~~~A~~~Gl~~v 164 (196)
T 2q5c_A 136 SKVKTENIKIVVSGK---------TVTDEAIKQGLYGE 164 (196)
T ss_dssp HHHHHTTCCEEEECH---------HHHHHHHHTTCEEE
T ss_pred HHHHHCCCeEEECCH---------HHHHHHHHcCCcEE
Confidence 345567999999766 78999999999854
No 62
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=72.91 E-value=13 Score=34.97 Aligned_cols=81 Identities=20% Similarity=0.150 Sum_probs=46.1
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceee
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAI 120 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~ 120 (251)
.++..+.-|... .|.+|+++......-.+.+++.+..-.++++.. + |.+ -+.+.+++.+||+++.+.
T Consensus 291 ~~~~la~~L~~E-lGm~vv~~gt~~~~~~~~~~~~~~~~~~~v~i~-~----D~~----el~~~i~~~~pDL~ig~~--- 357 (525)
T 3aek_B 291 HVIAAARIAAKE-VGFEVVGMGCYNREMARPLRTAAAEYGLEALIT-D----DYL----EVEKAIEAAAPELILGTQ--- 357 (525)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEEESCGGGHHHHHHHHHHTTCCCEEC-S----CHH----HHHHHHHHHCCSEEEECH---
T ss_pred HHHHHHHHHHHH-cCCeeEEEecCchhHHHHHHHHHHhcCCcEEEe-C----CHH----HHHHHHhhcCCCEEEecc---
Confidence 456666666322 566665443333322334444433212333332 1 332 466778888999999544
Q ss_pred cCCcCcHHHHHHHHcCCCcc
Q 025565 121 DDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 121 d~~~~~v~~~lA~~Lg~p~v 140 (251)
-.-.+|.++|+|++
T Consensus 358 ------~~~~~a~~~giP~~ 371 (525)
T 3aek_B 358 ------MERNIAKKLGLPCA 371 (525)
T ss_dssp ------HHHHHHHHHTCCEE
T ss_pred ------hhHHHHHHcCCCEE
Confidence 56678889999986
No 63
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=72.73 E-value=34 Score=27.24 Aligned_cols=79 Identities=11% Similarity=-0.032 Sum_probs=51.1
Q ss_pred eEEEEeeCCch--------hHHHH-HHHHHCCCCEEE--EEeeCCCCCHHHHHHHHHHHHHHhCCCEEEE-cceeecCCc
Q 025565 57 EVVAVSMGPAQ--------CVDTL-RTGLAMGADRGV--HVEAAGQLYPLTVAKILKSLVEVEKPGLIIL-GKQAIDDDC 124 (251)
Q Consensus 57 ~V~al~~G~~~--------~~~~l-~~~la~GaD~vi--~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~-G~~s~d~~~ 124 (251)
+|..++.|++- -...+ +.+..+|++-.. ++.| |.+.+..+|.+++++ +|+|++ |.++.+ ..
T Consensus 5 ~v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~D----d~~~I~~~l~~a~~~--~DlVittGG~g~~-~~ 77 (172)
T 3kbq_A 5 NASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVMD----DLDEIGWAFRVALEV--SDLVVSSGGLGPT-FD 77 (172)
T ss_dssp EEEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEECS----CHHHHHHHHHHHHHH--CSEEEEESCCSSS-TT
T ss_pred EEEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeCC----CHHHHHHHHHHHHhc--CCEEEEcCCCcCC-cc
Confidence 67778888741 12233 445568986443 3332 577888888887764 897764 555443 33
Q ss_pred CcHHHHHHHHcCCCcccc
Q 025565 125 NQTGQMVAGLLSWPQGTF 142 (251)
Q Consensus 125 ~~v~~~lA~~Lg~p~vt~ 142 (251)
-.+...+|..+|.++.-+
T Consensus 78 D~T~ea~a~~~~~~l~~~ 95 (172)
T 3kbq_A 78 DMTVEGFAKCIGQDLRID 95 (172)
T ss_dssp CCHHHHHHHHHTCCCEEC
T ss_pred cchHHHHHHHcCCCeeeC
Confidence 567788888999888644
No 64
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=72.03 E-value=26 Score=27.77 Aligned_cols=73 Identities=18% Similarity=0.218 Sum_probs=50.2
Q ss_pred EEEeeCCch----hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHH
Q 025565 59 VAVSMGPAQ----CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGL 134 (251)
Q Consensus 59 ~al~~G~~~----~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~ 134 (251)
+++.||+.+ ++++...+-.+|..--+.+.. .+..++ .+.+++++...++|+++.. ..+.+|+.+|..
T Consensus 2 V~Iimgs~SD~~v~~~a~~~l~~~gi~~dv~V~s-aHR~p~----~~~~~~~~a~~~ViIa~AG----~aa~Lpgvva~~ 72 (157)
T 2ywx_A 2 ICIIMGSESDLKIAEKAVNILKEFGVEFEVRVAS-AHRTPE----LVEEIVKNSKADVFIAIAG----LAAHLPGVVASL 72 (157)
T ss_dssp EEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTCHH----HHHHHHHHCCCSEEEEEEE----SSCCHHHHHHTT
T ss_pred EEEEEccHHHHHHHHHHHHHHHHcCCCeEEEEEc-ccCCHH----HHHHHHHhcCCCEEEEEcC----chhhhHHHHHhc
Confidence 578888865 445556677899985555542 244554 3445555544499998873 457899999999
Q ss_pred cCCCcc
Q 025565 135 LSWPQG 140 (251)
Q Consensus 135 Lg~p~v 140 (251)
-..|+|
T Consensus 73 t~~PVI 78 (157)
T 2ywx_A 73 TTKPVI 78 (157)
T ss_dssp CSSCEE
T ss_pred cCCCEE
Confidence 999987
No 65
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=71.83 E-value=16 Score=32.67 Aligned_cols=75 Identities=9% Similarity=-0.075 Sum_probs=47.4
Q ss_pred CCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHH
Q 025565 54 LASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAG 133 (251)
Q Consensus 54 ~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~ 133 (251)
.|.+|+++.-.+...... ..-+|+.+.+. ...|.+.+...+.+..++.++|.|+.+.. ..-..++++|+
T Consensus 27 lG~~vv~v~~~~~~~~~~-----~~~~d~~~~~~--~~~d~~~~~~~~~~~~~~~~id~V~~~~e----~~~~~~a~l~e 95 (425)
T 3vot_A 27 LGLKVTFFYNSAEDFPGN-----LPAVERCVPLP--LFEDEEAAMDVVRQTFVEFPFDGVMTLFE----PALPFTAKAAE 95 (425)
T ss_dssp TTCEEEEEEETTSCCCCS-----CTTEEEEEEEC--TTTCHHHHHHHHHHHHHHSCCSEEECCCG----GGHHHHHHHHH
T ss_pred CCCEEEEEECCCcccccC-----HhhccEEEecC--CCCCHHHHHHHHHHhhhhcCCCEEEECCc----hhHHHHHHHHH
Confidence 366777665554321000 11246666554 23478888888989999899999987642 22346678888
Q ss_pred HcCCCc
Q 025565 134 LLSWPQ 139 (251)
Q Consensus 134 ~Lg~p~ 139 (251)
.||+|.
T Consensus 96 ~lglpg 101 (425)
T 3vot_A 96 ALNLPG 101 (425)
T ss_dssp HTTCSS
T ss_pred HcCCCC
Confidence 888874
No 66
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=71.56 E-value=17 Score=33.84 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=25.9
Q ss_pred HHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 100 ILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 100 ~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
-+.+.+++.+|||++.|. -.-.+|.++|+|++
T Consensus 408 el~~~i~~~~pDL~ig~~---------~~~~ia~k~gIP~~ 439 (492)
T 3u7q_A 408 EFEEFVKRIKPDLIGSGI---------KEKFIFQKMGIPFR 439 (492)
T ss_dssp HHHHHHHHHCCSEEEECH---------HHHHHHHHTTCCEE
T ss_pred HHHHHHHhcCCcEEEeCc---------chhHHHHHcCCCEE
Confidence 456677888999999765 44689999999987
No 67
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=70.50 E-value=19 Score=31.11 Aligned_cols=89 Identities=13% Similarity=0.086 Sum_probs=53.0
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCC----------CCCHH------------HHHH
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG----------QLYPL------------TVAK 99 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~----------~~d~~------------a~a~ 99 (251)
.+..|..|+++ |.+|+.++-+ . .....-+.|.. ++.+..+- ..++. ....
T Consensus 21 ~~~La~~L~~~--GheV~v~~~~--~---~~~~~~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (402)
T 3ia7_A 21 SLGLVSELARR--GHRITYVTTP--L---FADEVKAAGAE-VVLYKSEFDTFHVPEVVKQEDAETQLHLVYVRENVAILR 92 (402)
T ss_dssp HHHHHHHHHHT--TCEEEEEECH--H---HHHHHHHTTCE-EEECCCGGGTSSSSSSSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC--CCEEEEEcCH--H---HHHHHHHcCCE-EEecccccccccccccccccchHHHHHHHHHHHHHHHHH
Confidence 46788888875 7789887732 2 23334456764 33333210 00111 1134
Q ss_pred HHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 100 ILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 100 ~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
.+.+.+++.+||+|++.+ ...-.+..+|.++|+|++...
T Consensus 93 ~l~~~l~~~~pD~Vi~d~-----~~~~~~~~aA~~~giP~v~~~ 131 (402)
T 3ia7_A 93 AAEEALGDNPPDLVVYDV-----FPFIAGRLLAARWDRPAVRLT 131 (402)
T ss_dssp HHHHHHTTCCCSEEEEES-----TTHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHhccCCCEEEECc-----hHHHHHHHHHHhhCCCEEEEe
Confidence 455666777999999742 123367888999999988764
No 68
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=69.23 E-value=32 Score=28.96 Aligned_cols=71 Identities=17% Similarity=0.098 Sum_probs=51.7
Q ss_pred HHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 43 LEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
.+.|++|+++ |.+|+......+..++..+++-++|.+ ++.+..| -.|.+.+.+.+.++.++. +.|+++--.
T Consensus 21 ~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~~i~~~g~~-~~~~~~D-vt~~~~v~~~~~~~~~~~G~iDiLVNNA 92 (254)
T 4fn4_A 21 RAIAKKFALN--DSIVVAVELLEDRLNQIVQELRGMGKE-VLGVKAD-VSKKKDVEEFVRRTFETYSRIDVLCNNA 92 (254)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4567888875 778887777666666777778788876 4444433 568888888888888887 589888543
No 69
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=69.18 E-value=28 Score=30.74 Aligned_cols=129 Identities=13% Similarity=0.047 Sum_probs=70.4
Q ss_pred EEEEeeccCCCceEEecCC--Ce-EEccCCccCCCHHhHHHHHH---HHHhhhhCCCceEEEEe--eC-----------C
Q 025565 5 VAIKRVVDYAVKIRVKSDR--TG-VETNNVKMSMNPFCEIALEE---ALRIKESGLASEVVAVS--MG-----------P 65 (251)
Q Consensus 5 V~~K~Vpd~~~~~~~~~~~--~~-~~~~~~~~~in~~d~~Ale~---A~~lae~~~g~~V~al~--~G-----------~ 65 (251)
+.+++-||-+..+++..+- .. +-.. ..-.|.+.+.+|. .-.+++. ...+|+++. +| .
T Consensus 30 ~~~~~F~dGE~~v~i~esvrg~dV~iiq---s~~~p~nd~lmeLl~~idA~k~a-sA~rIt~ViPY~~YaRQDr~~~~re 105 (326)
T 3s5j_B 30 VVTKKFSNQETCVEIGESVRGEDVYIVQ---SGCGEINDNLMELLIMINACKIA-SASRVTAVIPCFPYARQDKKDKSRA 105 (326)
T ss_dssp EEEEECTTSCEEEEECSCCTTCEEEEEC---CCCSCHHHHHHHHHHHHHHHHHT-TCSEEEEEESSCTTTTCCSCTTSSC
T ss_pred eEEeECCCCCEEEEECCCcCCCcEEEEe---cCCCCccHHHHHHHHHHHHHHhc-CCcEEEEeccCccccccCCcCCCCC
Confidence 3577888887667775331 11 1122 1123444444432 3333443 345788774 22 2
Q ss_pred c-hhHHHHHHHHHCCCCEEEEEeeCC----C-C----CHHHHHHHHHHHHHHhC---CCEEEEcceeecCCcCcHHHHHH
Q 025565 66 A-QCVDTLRTGLAMGADRGVHVEAAG----Q-L----YPLTVAKILKSLVEVEK---PGLIILGKQAIDDDCNQTGQMVA 132 (251)
Q Consensus 66 ~-~~~~~l~~~la~GaD~vi~v~~~~----~-~----d~~a~a~~La~~ik~~~---~dlIl~G~~s~d~~~~~v~~~lA 132 (251)
+ .+.-.++.+-.+|+|+++.++-.. + + |...-+..|++.+++.- -+.+++|- |..+-..+..+|
T Consensus 106 pisak~vA~lL~~~G~drvit~DlH~~qiqgfF~ipvd~l~a~p~l~~~i~~~~~~~~~~vVVsp---d~Ggv~~A~~lA 182 (326)
T 3s5j_B 106 PISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSP---DAGGAKRVTSIA 182 (326)
T ss_dssp CCHHHHHHHHHHHHTCSEEEEESCSSGGGGGGCSSCEEEECSHHHHHHHHHHHCTTGGGCEEEES---SGGGHHHHHHHH
T ss_pred CEeHHHHHHHHHHcCCCEEEEEeCCChHHHhhcCCceeceEcHHHHHHHHHHhcCcCCCcEEEEE---CCCchHHHHHHH
Confidence 2 223333444458999999997321 1 2 22222466777776642 24555555 334567899999
Q ss_pred HHcCCCcc
Q 025565 133 GLLSWPQG 140 (251)
Q Consensus 133 ~~Lg~p~v 140 (251)
.+||.|+.
T Consensus 183 ~~L~~~~~ 190 (326)
T 3s5j_B 183 DRLNVDFA 190 (326)
T ss_dssp HHHTCEEE
T ss_pred HHcCCCEE
Confidence 99999864
No 70
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=69.15 E-value=35 Score=28.35 Aligned_cols=87 Identities=7% Similarity=-0.057 Sum_probs=52.3
Q ss_pred CCCHHhHHHHHHHHHhhhhCCCceEEEEeeCCchh-HHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCE
Q 025565 34 SMNPFCEIALEEALRIKESGLASEVVAVSMGPAQC-VDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGL 112 (251)
Q Consensus 34 ~in~~d~~Ale~A~~lae~~~g~~V~al~~G~~~~-~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dl 112 (251)
.++.||. | .|++.+++ .+.++..+.++.-.. -+.+.+.+ |.+=.+..- .+.+..-..+ +.+++.++++
T Consensus 89 ~vs~~Di--l-~aL~~a~~-~~~kIavVg~~~~~~~~~~i~~ll--~~~i~~~~~----~~~ee~~~~i-~~l~~~G~~v 157 (225)
T 2pju_A 89 KPSGYDV--L-QFLAKAGK-LTSSIGVVTYQETIPALVAFQKTF--NLRLDQRSY----ITEEDARGQI-NELKANGTEA 157 (225)
T ss_dssp CCCHHHH--H-HHHHHTTC-TTSCEEEEEESSCCHHHHHHHHHH--TCCEEEEEE----SSHHHHHHHH-HHHHHTTCCE
T ss_pred cCCHHHH--H-HHHHHHHh-hCCcEEEEeCchhhhHHHHHHHHh--CCceEEEEe----CCHHHHHHHH-HHHHHCCCCE
Confidence 4567774 3 45555554 466888888887431 22344444 445222221 1233433444 3455679999
Q ss_pred EEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 113 IILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 113 Il~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
|+.|. +...+|.++|++.+
T Consensus 158 VVG~~---------~~~~~A~~~Gl~~v 176 (225)
T 2pju_A 158 VVGAG---------LITDLAEEAGMTGI 176 (225)
T ss_dssp EEESH---------HHHHHHHHTTSEEE
T ss_pred EECCH---------HHHHHHHHcCCcEE
Confidence 99766 78999999999854
No 71
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=68.36 E-value=20 Score=31.03 Aligned_cols=40 Identities=23% Similarity=0.428 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 98 AKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 98 a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
...|.+++++.+||+|++-. ....+..+|.++|+|++...
T Consensus 103 ~~~l~~~l~~~~PD~Vv~~~------~~~~~~~aa~~~giP~v~~~ 142 (391)
T 3tsa_A 103 LPEYLRLAEAWRPSVLLVDV------CALIGRVLGGLLDLPVVLHR 142 (391)
T ss_dssp HHHHHHHHHHHCCSEEEEET------TCHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHhcCCCEEEeCc------chhHHHHHHHHhCCCEEEEe
Confidence 44566778888999999842 23456778889999988764
No 72
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=67.78 E-value=44 Score=26.82 Aligned_cols=78 Identities=10% Similarity=0.066 Sum_probs=47.1
Q ss_pred ceEEEEeeCCch--------hHHHHHHHHH----CCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEE-cceeecC
Q 025565 56 SEVVAVSMGPAQ--------CVDTLRTGLA----MGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIIL-GKQAIDD 122 (251)
Q Consensus 56 ~~V~al~~G~~~--------~~~~l~~~la----~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~-G~~s~d~ 122 (251)
-+|..++.|++- ....+...+. +|++-....--+ -|.+.+.++|.+++.+.++|+||+ |.++.+.
T Consensus 15 ~rv~IistGdEl~~g~~~D~n~~~L~~~L~~~~~~G~~v~~~~iv~--Dd~~~I~~al~~a~~~~~~DlVIttGGtg~g~ 92 (189)
T 1jlj_A 15 IRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVP--DEIEEIKETLIDWCDEKELNLILTTGGTGFAP 92 (189)
T ss_dssp CEEEEEEECHHHHTTSSCCHHHHHHHHHHHCTTTTCCEEEEEEEEC--SCHHHHHHHHHHHHHTSCCSEEEEESCCSSST
T ss_pred CEEEEEEECCccCCCcccchHHHHHHHHHhchhcCCcEEEEEEEeC--CCHHHHHHHHHHHhhcCCCCEEEEcCCCCCCC
Confidence 367778888651 2235666665 687655432211 157788888888877557897765 5555443
Q ss_pred CcCcHHHHHHHHcC
Q 025565 123 DCNQTGQMVAGLLS 136 (251)
Q Consensus 123 ~~~~v~~~lA~~Lg 136 (251)
--.++..++..++
T Consensus 93 -~D~t~eal~~~~~ 105 (189)
T 1jlj_A 93 -RDVTPEATKEVIE 105 (189)
T ss_dssp -TCCHHHHHHHHCS
T ss_pred -cccHHHHHHHHhc
Confidence 2345566665553
No 73
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=66.64 E-value=49 Score=29.02 Aligned_cols=129 Identities=13% Similarity=0.182 Sum_probs=73.2
Q ss_pred EEEEeeccCCCceEEecC--CCe-EEccCCccCCCHHhHHHHHH---HHHhhhhCCCceEEEEe--eC-----------C
Q 025565 5 VAIKRVVDYAVKIRVKSD--RTG-VETNNVKMSMNPFCEIALEE---ALRIKESGLASEVVAVS--MG-----------P 65 (251)
Q Consensus 5 V~~K~Vpd~~~~~~~~~~--~~~-~~~~~~~~~in~~d~~Ale~---A~~lae~~~g~~V~al~--~G-----------~ 65 (251)
+-+++-||-+..+++..+ +.. +-.. ..-.|.|.+.+|. .-.+++. ...+|+++. +| .
T Consensus 34 ~~~~~F~dGE~~v~i~esvrg~dV~iiq---s~~~p~nd~lmeLl~~idA~k~a-sA~rIt~ViPY~~YaRQDr~~~~~r 109 (319)
T 3dah_A 34 AMVSRFSDGEIQVEIQENVRGKDVFVLQ---STCAPTNDNLMELMIMVDALKRA-SAGRITAAIPYFGYARQDRRPRSAR 109 (319)
T ss_dssp EEEEECTTSCEEEEECSCCBTCEEEEEC---CCCSSHHHHHHHHHHHHHHHHHT-TBSEEEEEESSCTTTTCCSCCTTCC
T ss_pred eEEEECCCCCEEEEECCCcCCCeEEEEc---cCCCCCcHHHHHHHHHHHHHHHc-CCcEEEEEccCccccccccccCCCC
Confidence 346788888766776533 111 1111 1224555555443 2233333 234788774 22 1
Q ss_pred c-hhHHHH-HHHHHCCCCEEEEEeeCC----C-C----CHHHHHHHHHHHHHHhC-CCEEEEcceeecCCcCcHHHHHHH
Q 025565 66 A-QCVDTL-RTGLAMGADRGVHVEAAG----Q-L----YPLTVAKILKSLVEVEK-PGLIILGKQAIDDDCNQTGQMVAG 133 (251)
Q Consensus 66 ~-~~~~~l-~~~la~GaD~vi~v~~~~----~-~----d~~a~a~~La~~ik~~~-~dlIl~G~~s~d~~~~~v~~~lA~ 133 (251)
+ -....+ +.+-.+|+|+++.++-.. + + |....+..|++.+++.+ -+.+++|- |..+-..+..+|.
T Consensus 110 ~pisak~vA~ll~~~G~d~vit~DlH~~qiqgfF~ipvd~l~a~p~l~~~i~~~~~~~~vVVsp---d~Ggv~~A~~lA~ 186 (319)
T 3dah_A 110 VAISAKVVANMLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPILLGDLRKQNYPDLLVVSP---DVGGVVRARALAK 186 (319)
T ss_dssp CCCHHHHHHHHHHHHTCCEEEEESCSCGGGGGGCSSCEEEECCHHHHHHHHHTTCCTTEEEECC---SSTTHHHHHHHHH
T ss_pred CCccHHHHHHHHHhcCCCEEEEEECCChHHhhhcCCceEecccHHHHHHHHHHhCCCCcEEEEe---CCCccHHHHHHHH
Confidence 1 122334 444458999999997422 1 2 22233567888887643 45677765 3455678999999
Q ss_pred HcCCCcc
Q 025565 134 LLSWPQG 140 (251)
Q Consensus 134 ~Lg~p~v 140 (251)
+||.|+.
T Consensus 187 ~L~~p~~ 193 (319)
T 3dah_A 187 QLNCDLA 193 (319)
T ss_dssp HTTCEEE
T ss_pred HhCCCEE
Confidence 9999863
No 74
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=66.35 E-value=45 Score=27.45 Aligned_cols=76 Identities=7% Similarity=-0.001 Sum_probs=50.5
Q ss_pred HhHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 38 FCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 38 ~d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
..+++|-.+.+-.+ ...+|.+|.-..++ ...++.|..+|..- +.++.....+...+-..+.+.+++.+||+|++-.
T Consensus 14 snl~ali~~~~~~~--l~~eI~~Visn~~~-a~v~~~A~~~gIp~-~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~ag 89 (211)
T 3p9x_A 14 TNAEAIIQSQKAGQ--LPCEVALLITDKPG-AKVVERVKVHEIPV-CALDPKTYPSKEAYEIEVVQQLKEKQIDFVVLAG 89 (211)
T ss_dssp HHHHHHHHHHHTTC--CSSEEEEEEESCSS-SHHHHHHHTTTCCE-EECCGGGSSSHHHHHHHHHHHHHHTTCCEEEESS
T ss_pred hHHHHHHHHHHcCC--CCcEEEEEEECCCC-cHHHHHHHHcCCCE-EEeChhhcCchhhhHHHHHHHHHhcCCCEEEEeC
Confidence 35677766654433 34588877766543 35677888999874 3333211235567777888999999999999865
No 75
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=66.00 E-value=30 Score=30.50 Aligned_cols=65 Identities=9% Similarity=0.027 Sum_probs=37.0
Q ss_pred hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHH
Q 025565 68 CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAG 133 (251)
Q Consensus 68 ~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~ 133 (251)
..+.++.+..+|++.+.+.+.-....|..+...+..+-+..++++-+.-+.-.|.. -.++-.+|+
T Consensus 151 ~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G-~avAn~laA 215 (345)
T 1nvm_A 151 LAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLS-LGVANSIVA 215 (345)
T ss_dssp HHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTS-CHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCcc-HHHHHHHHH
Confidence 44456677778888766655333456777777776666655446555444443433 334444433
No 76
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=65.67 E-value=65 Score=27.67 Aligned_cols=94 Identities=14% Similarity=0.066 Sum_probs=53.8
Q ss_pred HHHHHHhhhhCCCceEEEEeeC-----CchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhC-C-CEEEE
Q 025565 43 LEEALRIKESGLASEVVAVSMG-----PAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEK-P-GLIIL 115 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al~~G-----~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~-~-dlIl~ 115 (251)
+....+.+.+ .|.+|..-..- ++...+.++.+..+|+|.+.+.+.-....|..+...+..+.+..+ . ++.|-
T Consensus 123 ~~~~v~~a~~-~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~ 201 (293)
T 3ewb_X 123 IKHHISYARQ-KFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFA 201 (293)
T ss_dssp HHHHHHHHHT-TCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEE
T ss_pred HHHHHHHHHh-CCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEE
Confidence 4444555554 56666532221 112455678899999998777664446789999888877766653 1 23343
Q ss_pred cceeecCCcCcHHHHHHH-HcCCC
Q 025565 116 GKQAIDDDCNQTGQMVAG-LLSWP 138 (251)
Q Consensus 116 G~~s~d~~~~~v~~~lA~-~Lg~p 138 (251)
-+.-.| .+-.++-.+|+ ..|+-
T Consensus 202 ~H~Hnd-~Gla~AN~laA~~aGa~ 224 (293)
T 3ewb_X 202 SHCHDD-LGMATANALAAIENGAR 224 (293)
T ss_dssp EECBCT-TSCHHHHHHHHHHTTCC
T ss_pred EEeCCC-cChHHHHHHHHHHhCCC
Confidence 333333 33445555554 44443
No 77
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=65.67 E-value=42 Score=30.70 Aligned_cols=81 Identities=21% Similarity=0.131 Sum_probs=44.9
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCch--hHHHHHHHHH-CC-CCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQ--CVDTLRTGLA-MG-ADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILG 116 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~--~~~~l~~~la-~G-aD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G 116 (251)
.++..+.-|.| .|.+++.+..+... -++.++++++ .| .+--++.. .|.+ .+.+.+++.+||+++.+
T Consensus 323 ~~~~l~~~L~e--lG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~~----~d~~----~l~~~i~~~~pDl~ig~ 392 (458)
T 1mio_B 323 EIIALSKFIIE--LGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKVE----GDFF----DVHQWIKNEGVDLLISN 392 (458)
T ss_dssp HHHHHHHHHHT--TTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEES----CBHH----HHHHHHHHSCCSEEEES
T ss_pred HHHHHHHHHHH--CCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEEC----CCHH----HHHHHHHhcCCCEEEeC
Confidence 34444544544 46666665555432 1233444333 23 33222222 2333 36677888899999955
Q ss_pred ceeecCCcCcHHHHHHHHcCCCcc
Q 025565 117 KQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 117 ~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
. -.-.+|.++|+|++
T Consensus 393 ~---------~~~~~a~k~gip~~ 407 (458)
T 1mio_B 393 T---------YGKFIAREENIPFV 407 (458)
T ss_dssp G---------GGHHHHHHHTCCEE
T ss_pred c---------chHHHHHHcCCCEE
Confidence 4 34677889999987
No 78
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=65.62 E-value=36 Score=31.54 Aligned_cols=88 Identities=14% Similarity=0.205 Sum_probs=53.3
Q ss_pred HHHHHHhhhhCCCceEE-EEe--eCCc----hhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEE
Q 025565 43 LEEALRIKESGLASEVV-AVS--MGPA----QCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIIL 115 (251)
Q Consensus 43 le~A~~lae~~~g~~V~-al~--~G~~----~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~ 115 (251)
+..+.+.+.+ .|.+|. .++ .|+. ...+.++++..+|||.+.+.+.-....|..+...+.++.+..+ +.|-
T Consensus 129 i~~~i~~ak~-~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~~--~~i~ 205 (464)
T 2nx9_A 129 MQQALQAVKK-MGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVD--VELH 205 (464)
T ss_dssp HHHHHHHHHH-TTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHCC--SCEE
T ss_pred HHHHHHHHHH-CCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhcC--CeEE
Confidence 4455555555 466664 332 2432 2456788899999998877765446789998888888777653 3332
Q ss_pred cceeecCCcCcHHHHHHHH
Q 025565 116 GKQAIDDDCNQTGQMVAGL 134 (251)
Q Consensus 116 G~~s~d~~~~~v~~~lA~~ 134 (251)
-++- +..+-.++-.+|+.
T Consensus 206 ~H~H-nd~GlAvAN~laAv 223 (464)
T 2nx9_A 206 LHCH-STAGLADMTLLKAI 223 (464)
T ss_dssp EEEC-CTTSCHHHHHHHHH
T ss_pred EEEC-CCCChHHHHHHHHH
Confidence 2322 33444566555543
No 79
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=65.00 E-value=41 Score=27.75 Aligned_cols=73 Identities=10% Similarity=-0.006 Sum_probs=48.5
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHH-CCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLA-MGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la-~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+.+.-..+..++..+++.. .|..++..+..| -.|...+...+.++.++. +.|+++.-.
T Consensus 21 G~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lvnnA 95 (265)
T 3lf2_A 21 GLATVELLLEA--GAAVAFCARDGERLRAAESALRQRFPGARLFASVCD-VLDALQVRAFAEACERTLGCASILVNNA 95 (265)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECC-TTCHHHHHHHHHHHHHHHCSCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 45677888875 67877766555444444555544 566656666644 557788888887777776 689888654
No 80
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=64.67 E-value=43 Score=27.84 Aligned_cols=73 Identities=14% Similarity=0.133 Sum_probs=47.5
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILG 116 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G 116 (251)
-..+.|.+|++. |.+|+++.-.++..++...++...|..++..+..| -.|.......+.++.++. ++|+++.-
T Consensus 40 IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-l~d~~~v~~~~~~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 40 IGREMAYHLAKM--GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGT-MEDMTFAEQFVAQAGKLMGGLDMLILN 113 (286)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECC-TTCHHHHHHHHHHHHHHHTSCSEEEEC
T ss_pred HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCC-CCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 345677778875 67888776655444444455555677777766644 457777777777766665 68988843
No 81
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=64.42 E-value=44 Score=31.23 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=23.6
Q ss_pred HHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHc-------CCCcc
Q 025565 100 ILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLL-------SWPQG 140 (251)
Q Consensus 100 ~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~L-------g~p~v 140 (251)
.+.+.+++.+||+++.+. -+-.+|.++ |+|++
T Consensus 425 ~l~~~i~~~~pDLiig~~---------~~~~~a~~~~~~g~~~gip~v 463 (519)
T 1qgu_B 425 HFRSLMFTRQPDFMIGNS---------YGKFIQRDTLAKGKAFEVPLI 463 (519)
T ss_dssp HHHHHHHHHCCSEEEECG---------GGHHHHHHHHHHCGGGCCCEE
T ss_pred HHHHHHhhcCCCEEEECc---------chHHHHHHhhcccccCCCCeE
Confidence 345667777999999665 346678888 99986
No 82
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=63.58 E-value=47 Score=27.56 Aligned_cols=74 Identities=12% Similarity=0.067 Sum_probs=50.4
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCC--EEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGAD--RGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD--~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
--.+.|.+|+++ |.+|+.+.-.++..++..+++-+.|.. ++..+..| -.|...+.+.+.++.++. +.|+++.-.
T Consensus 23 IG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 99 (281)
T 3svt_A 23 IGKGVAAGLVAA--GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTD-ITNEDETARAVDAVTAWHGRLHGVVHCA 99 (281)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345677888875 678887766555455566666666653 66666544 557888888888887776 689888644
No 83
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=62.67 E-value=34 Score=30.00 Aligned_cols=88 Identities=14% Similarity=0.073 Sum_probs=51.8
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCC--CC--------C-----------HHHHHHH
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG--QL--------Y-----------PLTVAKI 100 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~--~~--------d-----------~~a~a~~ 100 (251)
++..|..|+++ |.+|+.++-+.. .+. ....|.+ .+.+.... .. + .......
T Consensus 24 ~~~la~~L~~~--G~~V~~~~~~~~--~~~---~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (430)
T 2iyf_A 24 SLEVIRELVAR--GHRVTYAIPPVF--ADK---VAATGPR-PVLYHSTLPGPDADPEAWGSTLLDNVEPFLNDAIQALPQ 95 (430)
T ss_dssp GHHHHHHHHHT--TCEEEEEECGGG--HHH---HHTTSCE-EEECCCCSCCTTSCGGGGCSSHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHC--CCeEEEEeCHHH--HHH---HHhCCCE-EEEcCCcCccccccccccchhhHHHHHHHHHHHHHHHHH
Confidence 46677778775 778887765542 222 3345765 34444221 11 1 0112334
Q ss_pred HHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 101 LKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 101 La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
+.+.+++.+||+|++-.. ...+..+|..+|+|++...
T Consensus 96 l~~~l~~~~pD~Vi~d~~------~~~~~~~A~~~giP~v~~~ 132 (430)
T 2iyf_A 96 LADAYADDIPDLVLHDIT------SYPARVLARRWGVPAVSLS 132 (430)
T ss_dssp HHHHHTTSCCSEEEEETT------CHHHHHHHHHHTCCEEEEE
T ss_pred HHHHhhccCCCEEEECCc------cHHHHHHHHHcCCCEEEEe
Confidence 556666778999996331 2367788899999987654
No 84
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=62.30 E-value=51 Score=25.88 Aligned_cols=77 Identities=9% Similarity=0.185 Sum_probs=43.4
Q ss_pred eEEEEeeCCch------hHHHHHH-HHHCCCCEEE--EEeeCCCCCHHHHHHHHHHHHHHhCCCEEEE-cceeecCCcCc
Q 025565 57 EVVAVSMGPAQ------CVDTLRT-GLAMGADRGV--HVEAAGQLYPLTVAKILKSLVEVEKPGLIIL-GKQAIDDDCNQ 126 (251)
Q Consensus 57 ~V~al~~G~~~------~~~~l~~-~la~GaD~vi--~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~-G~~s~d~~~~~ 126 (251)
+|..++.|++. ....+.. +..+|++-.. .+.| |.+.+.++|.+++++.++|+||+ |.++.+ ..-.
T Consensus 12 ~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~D----d~~~i~~~l~~a~~~~~~DlVittGG~g~~-~~D~ 86 (172)
T 1mkz_A 12 RIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKE----NRYAIRAQVSAWIASDDVQVVLITGGTGLT-EGDQ 86 (172)
T ss_dssp EEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECS----CHHHHHHHHHHHHHSSSCCEEEEESCCSSS-TTCC
T ss_pred EEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEEeCC----CHHHHHHHHHHHHhcCCCCEEEeCCCCCCC-CCCC
Confidence 67777888752 1123433 4467876433 2322 56777888887776546887765 444433 2234
Q ss_pred HHHHHHHHcCCC
Q 025565 127 TGQMVAGLLSWP 138 (251)
Q Consensus 127 v~~~lA~~Lg~p 138 (251)
+.-.++..++.+
T Consensus 87 t~ea~~~~~~~~ 98 (172)
T 1mkz_A 87 APEALLPLFDRE 98 (172)
T ss_dssp HHHHHGGGCSEE
T ss_pred HHHHHHHHhccc
Confidence 555555555433
No 85
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=61.80 E-value=36 Score=28.26 Aligned_cols=75 Identities=11% Similarity=0.059 Sum_probs=48.4
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCH-HHHHHHHHHHHHHh-CCCEEEEcce
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYP-LTVAKILKSLVEVE-KPGLIILGKQ 118 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~-~a~a~~La~~ik~~-~~dlIl~G~~ 118 (251)
-..+.|++|+++ |.+|+.+.-.....++.++++.+.|-.++..+..| -.|. .........+.++. +.|+++.-..
T Consensus 24 IG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-l~~~~~~v~~~~~~~~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 24 IGFEICKQLSSN--GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLD-VTDPIATMSSLADFIKTHFGKLDILVNNAG 100 (311)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECC-TTSCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEcc-CCCcHHHHHHHHHHHHHhCCCCCEEEECCc
Confidence 345678888875 67888777666555666677777776667666644 3455 55555555555544 6898887553
No 86
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=61.77 E-value=58 Score=25.73 Aligned_cols=76 Identities=13% Similarity=0.056 Sum_probs=45.3
Q ss_pred eEEEEeeCCch--------hHHHHHHHHH----CCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEE-cceeecCC
Q 025565 57 EVVAVSMGPAQ--------CVDTLRTGLA----MGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIIL-GKQAIDDD 123 (251)
Q Consensus 57 ~V~al~~G~~~--------~~~~l~~~la----~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~-G~~s~d~~ 123 (251)
+|..++.|++- ....+...+. +|++-.+.+-.| |.+.+.++|.++++..++|+||+ |.++.+.
T Consensus 7 rv~IistGdE~~~G~i~Dsn~~~l~~~l~~l~~~G~~v~~~iv~D---d~~~I~~~l~~~~~~~~~DlVittGG~g~g~- 82 (178)
T 2pbq_A 7 VIGVVTISDRASKGIYEDISGKAIIDYLKDVIITPFEVEYRVIPD---ERDLIEKTLIELADEKGCSLILTTGGTGPAP- 82 (178)
T ss_dssp EEEEEEECHHHHHTSSCCHHHHHHHHHHHHHBCSCCEEEEEEECS---CHHHHHHHHHHHHHTSCCSEEEEESCCSSST-
T ss_pred EEEEEEeCCcCCCCCeecchHHHHHHHHHHHHhCCCEEEEEEcCC---CHHHHHHHHHHHHhcCCCCEEEECCCCCCCC-
Confidence 67788888751 1234555554 897642222212 57788888888876557897765 5555443
Q ss_pred cCcHHHHHHHHcC
Q 025565 124 CNQTGQMVAGLLS 136 (251)
Q Consensus 124 ~~~v~~~lA~~Lg 136 (251)
--.+...++..++
T Consensus 83 ~D~t~ea~~~~~~ 95 (178)
T 2pbq_A 83 RDVTPEATEAVCE 95 (178)
T ss_dssp TCCHHHHHHHHCS
T ss_pred CCchHHHHHHHhC
Confidence 2345556666554
No 87
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=61.29 E-value=34 Score=28.74 Aligned_cols=75 Identities=12% Similarity=-0.023 Sum_probs=48.3
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
--..+.|.+|++. |.+|+.+.-.++..++...++.+.|...+..+..| -.|...+...+.++.++. +.|+++.-.
T Consensus 44 GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 119 (281)
T 4dry_A 44 GVGRGIAQALSAE--GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCD-VGDPDQVAALFAAVRAEFARLDLLVNNA 119 (281)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECC-TTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3445677888875 67887776655444444555545555554445433 457888888888877776 689888654
No 88
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=60.94 E-value=42 Score=30.85 Aligned_cols=75 Identities=20% Similarity=0.077 Sum_probs=48.0
Q ss_pred CceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCC--CCC---------HHHHHHHHHHHHHHhCCCEEEEcceeecCC
Q 025565 55 ASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG--QLY---------PLTVAKILKSLVEVEKPGLIILGKQAIDDD 123 (251)
Q Consensus 55 g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~--~~d---------~~a~a~~La~~ik~~~~dlIl~G~~s~d~~ 123 (251)
+++=+++..++..+-...+-+..+|..-+....... .++ .+. ..+.+.+++.+||+++.+.
T Consensus 312 ~Gkrv~i~~~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~~~~v~~~D~--~~le~~i~~~~pDllig~~------ 383 (458)
T 3pdi_B 312 SSARTAIAADPDLLLGFDALLRSMGAHTVAAVVPARAAALVDSPLPSVRVGDL--EDLEHAARAGQAQLVIGNS------ 383 (458)
T ss_dssp TTCEEEEECCHHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTTSSCEEESHH--HHHHHHHHHHTCSEEEECT------
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCccCcEEeCCH--HHHHHHHHhcCCCEEEECh------
Confidence 334445544443344455667789999887776321 111 111 2467888889999999654
Q ss_pred cCcHHHHHHHHcCCCcc
Q 025565 124 CNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 124 ~~~v~~~lA~~Lg~p~v 140 (251)
-.-.+|.++|+|++
T Consensus 384 ---~~~~~a~k~gip~~ 397 (458)
T 3pdi_B 384 ---HALASARRLGVPLL 397 (458)
T ss_dssp ---THHHHHHHTTCCEE
T ss_pred ---hHHHHHHHcCCCEE
Confidence 34578999999987
No 89
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=60.83 E-value=38 Score=29.67 Aligned_cols=80 Identities=9% Similarity=0.053 Sum_probs=57.4
Q ss_pred CCHHhHHHHHHHHHhhhhCCCceEEEEeeCCch-----------------hHHHHHHHHHCCCCEEEEEeeCC---CCCH
Q 025565 35 MNPFCEIALEEALRIKESGLASEVVAVSMGPAQ-----------------CVDTLRTGLAMGADRGVHVEAAG---QLYP 94 (251)
Q Consensus 35 in~~d~~Ale~A~~lae~~~g~~V~al~~G~~~-----------------~~~~l~~~la~GaD~vi~v~~~~---~~d~ 94 (251)
++.=-...|+.|++++++ .|...+++++-|.. .++-++.+-++|+|.++.+.-+. ..++
T Consensus 32 vH~GHq~li~~a~~~a~~-~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~lGVD~v~~~~F~~~~a~ls~ 110 (308)
T 3op1_A 32 IHKGHQELFRVANKAARK-DLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTA 110 (308)
T ss_dssp CCHHHHHHHHHHHHHSST-TCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHHTCCEEEEECCCHHHHTCCH
T ss_pred ccHHHHHHHHHHHHHHHh-cCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHcCCCEEEEecCCHHHHcCCH
Confidence 455557789999999987 67788888876521 13445556778999999987543 4677
Q ss_pred HHHHHHHHHHHHHhCCCEEEEcce
Q 025565 95 LTVAKILKSLVEVEKPGLIILGKQ 118 (251)
Q Consensus 95 ~a~a~~La~~ik~~~~dlIl~G~~ 118 (251)
+...+.+ +++.+++.|++|.-
T Consensus 111 e~Fv~~l---l~~l~~~~ivvG~D 131 (308)
T 3op1_A 111 QEFFATY---IKAMNAKIIVAGFD 131 (308)
T ss_dssp HHHHHHH---HHHHTEEEEEEETT
T ss_pred HHHHHHH---HHHcCCCEEEECcC
Confidence 7766633 45678888888864
No 90
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=60.07 E-value=72 Score=26.28 Aligned_cols=74 Identities=8% Similarity=0.011 Sum_probs=47.2
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCC-CEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGA-DRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~Ga-D~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|++. |.+|+++.-.+...++..+++...|. .++..+..| -.|...+..++.++.++. ++|+|+.-.
T Consensus 44 IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-l~~~~~v~~~~~~~~~~~g~iD~vi~~A 119 (279)
T 1xg5_A 44 IGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCD-LSNEEDILSMFSAIRSQHSGVDICINNA 119 (279)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECC-TTCHHHHHHHHHHHHHHHCCCSEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEec-CCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 345677778875 67887776654444444455555664 456555543 457777777777777666 689888644
No 91
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=59.93 E-value=70 Score=26.09 Aligned_cols=61 Identities=5% Similarity=-0.062 Sum_probs=42.2
Q ss_pred CceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 55 ASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 55 g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
+.+|.+|.--+++ ...++.|..+|..-. .++.....+...+...+.+.+++.+||+|++-+
T Consensus 30 ~~~I~~Vit~~~~-~~v~~~A~~~gIp~~-~~~~~~~~~~~~~~~~~~~~l~~~~~Dliv~a~ 90 (212)
T 3av3_A 30 PARVALLVCDRPG-AKVIERAARENVPAF-VFSPKDYPSKAAFESEILRELKGRQIDWIALAG 90 (212)
T ss_dssp CEEEEEEEESSTT-CHHHHHHHHTTCCEE-ECCGGGSSSHHHHHHHHHHHHHHTTCCEEEESS
T ss_pred CCeEEEEEeCCCC-cHHHHHHHHcCCCEE-EeCcccccchhhhHHHHHHHHHhcCCCEEEEch
Confidence 5688777766543 356777889998843 333211235667777888889999999999865
No 92
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=58.86 E-value=29 Score=30.48 Aligned_cols=88 Identities=14% Similarity=0.125 Sum_probs=51.4
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeC--CC-------C-CHH-----------HHHHH
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAA--GQ-------L-YPL-----------TVAKI 100 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~--~~-------~-d~~-----------a~a~~ 100 (251)
.+..|.+|+++ |.+|+.++-.. ..+.++ +.|.+ .+-+.++ .. . +.. .....
T Consensus 29 ~l~la~~L~~~--Gh~V~~~~~~~--~~~~~~---~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (424)
T 2iya_A 29 SLGIVQELVAR--GHRVSYAITDE--FAAQVK---AAGAT-PVVYDSILPKESNPEESWPEDQESAMGLFLDEAVRVLPQ 100 (424)
T ss_dssp HHHHHHHHHHT--TCEEEEEECGG--GHHHHH---HHTCE-EEECCCCSCCTTCTTCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC--CCeEEEEeCHH--HHHHHH---hCCCE-EEecCccccccccchhhcchhHHHHHHHHHHHHHHHHHH
Confidence 46788888875 77888776543 233333 34764 3344322 11 0 111 12233
Q ss_pred HHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 101 LKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 101 La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
+.+++++.+||+|++-... ..+..+|+++|+|++...
T Consensus 101 l~~~l~~~~pD~VI~d~~~------~~~~~~A~~lgIP~v~~~ 137 (424)
T 2iya_A 101 LEDAYADDRPDLIVYDIAS------WPAPVLGRKWDIPFVQLS 137 (424)
T ss_dssp HHHHTTTSCCSEEEEETTC------THHHHHHHHHTCCEEEEE
T ss_pred HHHHHhccCCCEEEEcCcc------cHHHHHHHhcCCCEEEEe
Confidence 4455555689999975421 367889999999988654
No 93
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=58.64 E-value=35 Score=29.63 Aligned_cols=91 Identities=13% Similarity=0.100 Sum_probs=52.8
Q ss_pred HHHHHHhhhhCCCceEEE-E--eeCC--------chhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhC-C
Q 025565 43 LEEALRIKESGLASEVVA-V--SMGP--------AQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEK-P 110 (251)
Q Consensus 43 le~A~~lae~~~g~~V~a-l--~~G~--------~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~-~ 110 (251)
+..+.+.+.+ .|.+|.+ + ++|+ +...+.++.+..+|+|++.+.+.-....|..+.+.+..+.+..+ .
T Consensus 124 ~~~~v~~ak~-~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~ 202 (307)
T 1ydo_A 124 LKQVNNDAQK-ANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPAN 202 (307)
T ss_dssp HHHHHHHHHH-TTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGG
T ss_pred HHHHHHHHHH-CCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCC
Confidence 3444444544 5666642 2 2442 23455678888999999888764445789999888887766552 3
Q ss_pred CEEEEcceeecCCcCcHHHHHH-HHcCC
Q 025565 111 GLIILGKQAIDDDCNQTGQMVA-GLLSW 137 (251)
Q Consensus 111 dlIl~G~~s~d~~~~~v~~~lA-~~Lg~ 137 (251)
.+=+=++. | .+-.++-.+| ...|+
T Consensus 203 ~l~~H~Hn--d-~Gla~AN~laAv~aGa 227 (307)
T 1ydo_A 203 QIALHFHD--T-RGTALANMVTALQMGI 227 (307)
T ss_dssp GEEEECBG--G-GSCHHHHHHHHHHHTC
T ss_pred eEEEEECC--C-CchHHHHHHHHHHhCC
Confidence 34444443 2 2233444444 34444
No 94
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=57.73 E-value=72 Score=25.75 Aligned_cols=75 Identities=12% Similarity=0.081 Sum_probs=42.2
Q ss_pred eEEEEeeCCchh--------HHHHHH-HHHCCCC----EEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEE-cceeecC
Q 025565 57 EVVAVSMGPAQC--------VDTLRT-GLAMGAD----RGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIIL-GKQAIDD 122 (251)
Q Consensus 57 ~V~al~~G~~~~--------~~~l~~-~la~GaD----~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~-G~~s~d~ 122 (251)
+|..++.|++-. ...+.+ +-.+|++ ...++.| |.+.+.++|.+++.+.++|+||+ |.++.+.
T Consensus 5 rv~IIttGdEl~~G~i~D~n~~~L~~~L~~~G~~~~v~~~~iV~D----d~~~I~~al~~a~~~~~~DlVitTGGtg~g~ 80 (195)
T 1di6_A 5 RIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPD----EQAIIEQTLCELVDEMSCHLVLTTGGTGPAR 80 (195)
T ss_dssp EEEEEEEECC-------CCHHHHHHHHHHHHBCSCEEEEEEEEES----CHHHHHHHHHHHHHTSCCSEEEEESCCSSST
T ss_pred EEEEEEECCCCCCCeEEchHHHHHHHHHHHcCCCCceEEEEEeCC----CHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 566667776421 123444 4457877 2233443 56788888888877557897776 5554443
Q ss_pred CcCcHHHHHHHHcC
Q 025565 123 DCNQTGQMVAGLLS 136 (251)
Q Consensus 123 ~~~~v~~~lA~~Lg 136 (251)
+ -.++-.++..++
T Consensus 81 ~-D~T~ea~~~~~~ 93 (195)
T 1di6_A 81 R-DVTPDATLAVAD 93 (195)
T ss_dssp T-CCHHHHHHHTCS
T ss_pred C-ccHHHHHHHHhc
Confidence 2 344555555443
No 95
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=57.70 E-value=75 Score=25.88 Aligned_cols=72 Identities=8% Similarity=0.003 Sum_probs=46.8
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh--CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE--KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~--~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.-.++..++..+++...|. ++..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 22 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~~~~~~~~~~~~~~g~id~lv~~A 95 (260)
T 2ae2_A 22 GYGIVEELASL--GASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCD-LSSRSERQELMNTVANHFHGKLNILVNNA 95 (260)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECC-TTCHHHHHHHHHHHHHHTTTCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcC-CCCHHHHHHHHHHHHHHcCCCCCEEEECC
Confidence 34667788875 67888776655444444455545564 45555433 457888888888887775 589888654
No 96
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=57.65 E-value=63 Score=30.33 Aligned_cols=32 Identities=16% Similarity=0.138 Sum_probs=25.6
Q ss_pred HHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 100 ILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 100 ~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
-+.+.+++.+||+++.|. -.-.+|.++|+|++
T Consensus 447 el~~~i~~~~pDl~ig~~---------~~~~~a~k~gIP~~ 478 (533)
T 1mio_A 447 DMEVVLEKLKPDMFFAGI---------KEKFVIQKGGVLSK 478 (533)
T ss_dssp HHHHHHHHHCCSEEEECH---------HHHHHHHHTTCEEE
T ss_pred HHHHHHHhcCCCEEEccc---------chhHHHHhcCCCEE
Confidence 366778888999998765 35678999999996
No 97
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=57.45 E-value=75 Score=26.06 Aligned_cols=72 Identities=14% Similarity=0.129 Sum_probs=48.3
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+.+.-..+..++..+++...|.. +..+..| -.|...+.+.+.++.++. +.|+++.-.
T Consensus 24 G~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 24 GTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTDTGRR-ALSVGTD-ITDDAQVAHLVDETMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHTSCCSEEEECC
T ss_pred HHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcC-CCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 35677788875 678877766554445555666666654 4444433 567888888888888876 689888654
No 98
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=57.24 E-value=76 Score=25.90 Aligned_cols=72 Identities=15% Similarity=0.000 Sum_probs=49.1
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+.+.-..+..++..+++-+.|. ++..+..| -.|...+...+.++.++.+.|+++...
T Consensus 20 G~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~g~id~lv~nA 91 (252)
T 3h7a_A 20 GAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLD-ARNEDEVTAFLNAADAHAPLEVTIFNV 91 (252)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECC-TTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECc-CCCHHHHHHHHHHHHhhCCceEEEECC
Confidence 45677888885 67888877766666666666666665 55555533 457777777777776664578877644
No 99
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=55.95 E-value=87 Score=26.59 Aligned_cols=74 Identities=16% Similarity=0.126 Sum_probs=49.7
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeC----------CchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-
Q 025565 40 EIALEEALRIKESGLASEVVAVSMG----------PAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE- 108 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G----------~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~- 108 (251)
--..+.|.+|++. |.+|+++... ....++...++...|. ++..+..| -.|...+.+.+.++.++.
T Consensus 38 GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-v~d~~~v~~~~~~~~~~~g 113 (322)
T 3qlj_A 38 GIGRAHALAFAAE--GARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG-EAVADGSN-VADWDQAAGLIQTAVETFG 113 (322)
T ss_dssp HHHHHHHHHHHHT--TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTC-EEEEECCC-TTSHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHC--CCEEEEEeCcccccccccccHHHHHHHHHHHHhcCC-cEEEEECC-CCCHHHHHHHHHHHHHHcC
Confidence 3446778888885 6788877654 3444555666666665 55555533 557888888888887776
Q ss_pred CCCEEEEcc
Q 025565 109 KPGLIILGK 117 (251)
Q Consensus 109 ~~dlIl~G~ 117 (251)
+.|+++.-.
T Consensus 114 ~iD~lv~nA 122 (322)
T 3qlj_A 114 GLDVLVNNA 122 (322)
T ss_dssp CCCEEECCC
T ss_pred CCCEEEECC
Confidence 689888654
No 100
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=55.88 E-value=38 Score=27.76 Aligned_cols=73 Identities=5% Similarity=-0.040 Sum_probs=47.6
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHC--CCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAM--GADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~--GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|++. |.+|+.+.-..+..++..+++.+. +..++..+..| -.|.......+.++.++. +.|+++.-.
T Consensus 20 G~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~iD~lvnnA 95 (250)
T 3nyw_A 20 GAVIAAGLATD--GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLD-ITDCTKADTEIKDIHQKYGAVDILVNAA 95 (250)
T ss_dssp HHHHHHHHHHH--TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECC-TTCHHHHHHHHHHHHHHHCCEEEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEecc-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 45677888886 668877766554444444555444 43556665543 457788888888887776 589887654
No 101
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=55.51 E-value=77 Score=26.53 Aligned_cols=72 Identities=6% Similarity=0.036 Sum_probs=43.4
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHH-HHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTG-LAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~-la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|++|+++ |.+|+.+.-......+.+.+. -..|. ++..+..| -.|...+.+.+.++.++. +.|+++.-.
T Consensus 60 G~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 133 (291)
T 3ijr_A 60 GRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGD-LSDEQHCKDIVQETVRQLGSLNILVNNV 133 (291)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEESC-TTSHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCC-cEEEEECC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 35667777775 667776655543323333333 33454 34444433 457788888888887776 689888643
No 102
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=55.33 E-value=66 Score=27.26 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHhCCCEEEEcc
Q 025565 95 LTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 95 ~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
......|++++++.+||+|++..
T Consensus 134 ~~l~~~l~~~ir~~~PdvV~t~~ 156 (273)
T 3dff_A 134 GEVADDIRSIIDEFDPTLVVTCA 156 (273)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEECC
Confidence 57888899999999999999963
No 103
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=55.21 E-value=64 Score=25.87 Aligned_cols=76 Identities=8% Similarity=-0.011 Sum_probs=49.1
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCC-CCCHHHHHHHHHHHHHHh-CCCEEEEcce
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG-QLYPLTVAKILKSLVEVE-KPGLIILGKQ 118 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~-~~d~~a~a~~La~~ik~~-~~dlIl~G~~ 118 (251)
-..+.|.+|+++ |.+|+.+.-.+...++..+++...|..+...+..+- ..|...+...+.++.++. ++|+++.-..
T Consensus 26 IG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg 103 (247)
T 3i1j_A 26 IGAAAARAYAAH--GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNAS 103 (247)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCc
Confidence 345677888875 678877766655555555666666655444443232 357777777777777766 6898886553
No 104
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=54.98 E-value=51 Score=27.07 Aligned_cols=77 Identities=21% Similarity=0.140 Sum_probs=48.5
Q ss_pred HHhHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEc
Q 025565 37 PFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILG 116 (251)
Q Consensus 37 ~~d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G 116 (251)
...+++|-.+.+-.+ .+.+|.+|.-..+.+ ..++.|..+|..- +.++.....+...+-..+.+.+++.+||+|++-
T Consensus 18 gsnl~all~~~~~~~--l~~~I~~Visn~~~a-~~l~~A~~~gIp~-~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~a 93 (209)
T 4ds3_A 18 GSNMEALIRAAQAPG--FPAEIVAVFSDKAEA-GGLAKAEAAGIAT-QVFKRKDFASKEAHEDAILAALDVLKPDIICLA 93 (209)
T ss_dssp CHHHHHHHHHHTSTT--CSEEEEEEEESCTTC-THHHHHHHTTCCE-EECCGGGSSSHHHHHHHHHHHHHHHCCSEEEES
T ss_pred cHHHHHHHHHHHcCC--CCcEEEEEEECCccc-HHHHHHHHcCCCE-EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 345555555543222 346888777765443 3467888999873 333321122456666788889999999999986
Q ss_pred c
Q 025565 117 K 117 (251)
Q Consensus 117 ~ 117 (251)
.
T Consensus 94 g 94 (209)
T 4ds3_A 94 G 94 (209)
T ss_dssp S
T ss_pred c
Confidence 5
No 105
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=54.65 E-value=81 Score=25.74 Aligned_cols=72 Identities=10% Similarity=0.064 Sum_probs=48.1
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-.+.|++|+++ |.+|+.+.-..+..++..+++...|.. +..+..| -.|...+...+.++.++. +.|+++.-.
T Consensus 25 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~id~lv~nA 97 (256)
T 3gaf_A 25 GRAIAGTFAKA--GASVVVTDLKSEGAEAVAAAIRQAGGK-AIGLECN-VTDEQHREAVIKAALDQFGKITVLVNNA 97 (256)
T ss_dssp HHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEECC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 45677888886 678877666554445555556566654 4444433 567888888888888776 689888654
No 106
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=54.61 E-value=90 Score=25.84 Aligned_cols=61 Identities=18% Similarity=0.172 Sum_probs=41.0
Q ss_pred CceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 55 ASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 55 g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
+.+|.+|.-.+++ ...++.|..+|..- +.++.....+-..+...+.+.+++.+||+|++-.
T Consensus 49 ~~~I~~Vvt~~~~-~~~~~~A~~~gIp~-~~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~ag 109 (229)
T 3auf_A 49 PGRVAVVISDRAD-AYGLERARRAGVDA-LHMDPAAYPSRTAFDAALAERLQAYGVDLVCLAG 109 (229)
T ss_dssp SEEEEEEEESSTT-CHHHHHHHHTTCEE-EECCGGGSSSHHHHHHHHHHHHHHTTCSEEEESS
T ss_pred CCeEEEEEcCCCc-hHHHHHHHHcCCCE-EEECcccccchhhccHHHHHHHHhcCCCEEEEcC
Confidence 5678777766543 23567788899873 3333211234556667788889999999999865
No 107
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=54.59 E-value=42 Score=28.27 Aligned_cols=71 Identities=13% Similarity=0.098 Sum_probs=50.1
Q ss_pred HHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 43 LEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
.+.|++|+++ |.+|+....-.+..++..+++.+.|.+ ++.+..| -.|...+.+.+.++.++. +.|+++--.
T Consensus 23 ~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~l~~~g~~-~~~~~~D-v~~~~~v~~~~~~~~~~~G~iDiLVNNA 94 (255)
T 4g81_D 23 FAYAEGLAAA--GARVILNDIRATLLAESVDTLTRKGYD-AHGVAFD-VTDELAIEAAFSKLDAEGIHVDILINNA 94 (255)
T ss_dssp HHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCC-EEECCCC-TTCHHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred HHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEee-CCCHHHHHHHHHHHHHHCCCCcEEEECC
Confidence 4678888885 778776655555556667777788865 4444433 568888888888888887 589888644
No 108
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=54.51 E-value=85 Score=26.41 Aligned_cols=93 Identities=15% Similarity=0.091 Sum_probs=52.9
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCC--CC-------CHH---HHHHHHHHHHH
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG--QL-------YPL---TVAKILKSLVE 106 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~--~~-------d~~---a~a~~La~~ik 106 (251)
-..++..|..|++. |.+|+.++.++..... ..-..|.. ++.+.... .. ... .....+.+.++
T Consensus 20 ~~~~~~la~~L~~~--G~~V~v~~~~~~~~~~---~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 93 (364)
T 1f0k_A 20 VFPGLAVAHHLMAQ--GWQVRWLGTADRMEAD---LVPKHGIE-IDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMK 93 (364)
T ss_dssp HHHHHHHHHHHHTT--TCEEEEEECTTSTHHH---HGGGGTCE-EEECCCCCCTTCCHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHc--CCEEEEEecCCcchhh---hccccCCc-eEEecCCccCcCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456778888874 7799988877642111 12224653 44443221 11 111 12345667788
Q ss_pred HhCCCEEEEcceeecCCcCcHHHHHHHHcCCCccc
Q 025565 107 VEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGT 141 (251)
Q Consensus 107 ~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 141 (251)
+.+||+|++-... ....+..+|..+++|++.
T Consensus 94 ~~~pDvv~~~~~~----~~~~~~~~~~~~~~p~v~ 124 (364)
T 1f0k_A 94 AYKPDVVLGMGGY----VSGPGGLAAWSLGIPVVL 124 (364)
T ss_dssp HHCCSEEEECSST----THHHHHHHHHHTTCCEEE
T ss_pred hcCCCEEEEeCCc----CchHHHHHHHHcCCCEEE
Confidence 8899999985321 112345566778999873
No 109
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=54.43 E-value=78 Score=26.27 Aligned_cols=74 Identities=15% Similarity=0.052 Sum_probs=48.6
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
--..+.|.+|+++ |.+|+.+.-..+..++..+++...|.+ +..+..| -.|...+...+.++.++. +.|+++.-.
T Consensus 35 GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~id~lv~nA 109 (279)
T 3sju_A 35 GIGLAVARTLAAR--GIAVYGCARDAKNVSAAVDGLRAAGHD-VDGSSCD-VTSTDEVHAAVAAAVERFGPIGILVNSA 109 (279)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHCSCCEEEECC
T ss_pred HHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEECC-CCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 3445677888875 678877665554445555556566655 4444433 557888888888888776 589888654
No 110
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=54.42 E-value=1.1e+02 Score=27.35 Aligned_cols=71 Identities=11% Similarity=0.035 Sum_probs=45.4
Q ss_pred hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCC--CEEEEcceeecCCcCcHHHHHHH-HcCCCc
Q 025565 68 CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKP--GLIILGKQAIDDDCNQTGQMVAG-LLSWPQ 139 (251)
Q Consensus 68 ~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~--dlIl~G~~s~d~~~~~v~~~lA~-~Lg~p~ 139 (251)
..+.++.+..+|+|++.+.+.-....|..+...+..+.+..+. ++.|--+.-.| .+-.++--+|+ ..|+-.
T Consensus 159 ~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd-~GlAvAN~laAv~aGa~~ 232 (370)
T 3rmj_A 159 LAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHND-LGLAVANSLAALKGGARQ 232 (370)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCT-TSCHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCC-CChHHHHHHHHHHhCCCE
Confidence 4566788999999987776644467899999998887776542 24444344334 33445555554 445443
No 111
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=54.41 E-value=54 Score=27.72 Aligned_cols=23 Identities=13% Similarity=0.268 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHhCCCEEEEcc
Q 025565 95 LTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 95 ~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
......|++++++.+||+|++..
T Consensus 131 ~~~~~~l~~~ir~~~PdvV~t~~ 153 (270)
T 3dfi_A 131 AAIREDIESMIAECDPTLVLTCV 153 (270)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEeCC
Confidence 46788899999999999999964
No 112
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=54.03 E-value=64 Score=27.21 Aligned_cols=74 Identities=14% Similarity=0.079 Sum_probs=48.0
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCC--EEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGAD--RGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD--~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+++.-.++..++..+++...|.. ++..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 38 IG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 114 (297)
T 1xhl_A 38 IGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVAD-VTEASGQDDIINTTLAKFGKIDILVNNA 114 (297)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecC-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 345677888875 678887766554444444555555641 45555433 457788888888877776 689888754
No 113
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=53.56 E-value=72 Score=25.22 Aligned_cols=75 Identities=12% Similarity=0.171 Sum_probs=43.7
Q ss_pred ceEEEEeeCCchh-------------HHHHH-HHHHCCCCEEEE--EeeCCCCCHHHHHHHHHHHHHHhCCCEEEE-cce
Q 025565 56 SEVVAVSMGPAQC-------------VDTLR-TGLAMGADRGVH--VEAAGQLYPLTVAKILKSLVEVEKPGLIIL-GKQ 118 (251)
Q Consensus 56 ~~V~al~~G~~~~-------------~~~l~-~~la~GaD~vi~--v~~~~~~d~~a~a~~La~~ik~~~~dlIl~-G~~ 118 (251)
-+|..++.|++-. ...+. .+-.+|++-... +.| |.+.+.++|.+++++.++|+||+ |.+
T Consensus 16 ~rv~IittGde~~~~~~~~G~i~Dsn~~~L~~~l~~~G~~v~~~~iv~D----d~~~I~~al~~a~~~~~~DlVittGG~ 91 (178)
T 2pjk_A 16 LNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPD----DKIKILKAFTDALSIDEVDVIISTGGT 91 (178)
T ss_dssp CEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECS----CHHHHHHHHHHHHTCTTCCEEEEESCC
T ss_pred CEEEEEEeCcccccccccCCeEeehHHHHHHHHHHHCCCEEEEEEEeCC----CHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 4788888885311 12343 355678864433 332 57788888888876556997764 555
Q ss_pred eecCCcCcHHHHHHHHc
Q 025565 119 AIDDDCNQTGQMVAGLL 135 (251)
Q Consensus 119 s~d~~~~~v~~~lA~~L 135 (251)
+.+. --.++.-++..+
T Consensus 92 s~g~-~D~t~eal~~~~ 107 (178)
T 2pjk_A 92 GYSP-TDITVETIRKLF 107 (178)
T ss_dssp SSST-TCCHHHHHGGGC
T ss_pred CCCC-CcchHHHHHHHh
Confidence 5443 234444454443
No 114
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=53.53 E-value=79 Score=26.20 Aligned_cols=72 Identities=8% Similarity=-0.007 Sum_probs=47.7
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|++. |.+|+.+.-..+..++..+++-..|. ++..+..| -.|...+...+.++.++. +.|+++...
T Consensus 17 G~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lVnnA 89 (264)
T 3tfo_A 17 GEGIARELGVA--GAKILLGARRQARIEAIATEIRDAGG-TALAQVLD-VTDRHSVAAFAQAAVDTWGRIDVLVNNA 89 (264)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 35677888875 67887766555444555555656665 44444433 557888888888877776 689888654
No 115
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=53.37 E-value=91 Score=25.40 Aligned_cols=75 Identities=12% Similarity=0.036 Sum_probs=48.0
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
.+++|-.+.+-.+ .+.+|.+|.--++.+ ..++.|..+|..-. .++.....+...+-..+.+.+++.+||+|++-.
T Consensus 13 ~L~aLi~~~~~~~--~~~~I~~Vvs~~~~~-~~~~~A~~~gIp~~-~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~a~ 87 (209)
T 1meo_A 13 NLQALIDSTREPN--SSAQIDIVISNKAAV-AGLDKAERAGIPTR-VINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAG 87 (209)
T ss_dssp THHHHHHHHHSTT--CSCEEEEEEESSTTC-HHHHHHHHTTCCEE-ECCGGGSSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred HHHHHHHHHhcCC--CCcEEEEEEeCCCCh-HHHHHHHHcCCCEE-EECccccCchhhhhHHHHHHHHhcCCCEEEEcc
Confidence 4566655443322 356888887777643 34677889998843 333211234455556777888999999999765
No 116
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=53.36 E-value=29 Score=29.13 Aligned_cols=84 Identities=15% Similarity=0.088 Sum_probs=46.8
Q ss_pred CceEEEEeeCCchhHHHHHHH-HHCCCCE-EEEEeeCC------CCCHHHHHHHH----HHHHHHhCCCEEEEcceeecC
Q 025565 55 ASEVVAVSMGPAQCVDTLRTG-LAMGADR-GVHVEAAG------QLYPLTVAKIL----KSLVEVEKPGLIILGKQAIDD 122 (251)
Q Consensus 55 g~~V~al~~G~~~~~~~l~~~-la~GaD~-vi~v~~~~------~~d~~a~a~~L----a~~ik~~~~dlIl~G~~s~d~ 122 (251)
|.++-+++..... ....+++ .++|.+. +..+.... ..+.......+ .+.+++.+.|.|++|++..-
T Consensus 109 ~~rigVlaT~~t~-~~~~~~~l~~~g~~~~~~~v~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~gad~IVLGCTh~p- 186 (245)
T 3qvl_A 109 ATRFSIVTTLPRT-LIIARHLLHQYGFHQHCAALHAIDLPVLALEDGSGLAQEKVRERCIRALKEDGSGAIVLGSGGMA- 186 (245)
T ss_dssp CSCEEEEESCGGG-HHHHHHHHHHHTCGGGEEEEEECCSCGGGGGSSSSHHHHHHHHHHHHHHHHSCCSEEEECCGGGG-
T ss_pred CCEEEEEEcchhH-HHHHHHHHHHcCCCCeEEEEeCCCCCHHHHcCCcHHHHHHHHHHHHHHHHhcCCCEEEECCCChH-
Confidence 4567666666543 4445443 3567653 22222111 11222222223 33344568999999998644
Q ss_pred CcCcHHHHHHHHcCCCcccce
Q 025565 123 DCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 123 ~~~~v~~~lA~~Lg~p~vt~v 143 (251)
.+...+.+.+|.|++..+
T Consensus 187 ---~l~~~i~~~~gVpvID~~ 204 (245)
T 3qvl_A 187 ---TLAQQLTRELRVPVIDGV 204 (245)
T ss_dssp ---GGHHHHHHHHTSCEECHH
T ss_pred ---HHHHHHHHHcCCeEEccH
Confidence 477788899998877433
No 117
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=52.92 E-value=68 Score=26.71 Aligned_cols=74 Identities=12% Similarity=0.182 Sum_probs=45.8
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCch-hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQ-CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~-~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+.+.-.... .++...++...+-.++..+..| -.|...+..++.++.++. +.|+++.-.
T Consensus 37 IG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lv~nA 112 (281)
T 3v2h_A 37 IGLAIARTLAKA--GANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPAD-MTKPSEIADMMAMVADRFGGADILVNNA 112 (281)
T ss_dssp HHHHHHHHHHHT--TCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCC-TTCHHHHHHHHHHHHHHTSSCSEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCC-CCCHHHHHHHHHHHHHHCCCCCEEEECC
Confidence 445677888875 6677766553322 2333334444434556666543 557888888888887776 689888654
No 118
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=52.82 E-value=55 Score=26.68 Aligned_cols=75 Identities=12% Similarity=0.084 Sum_probs=46.9
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcce
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGKQ 118 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~~ 118 (251)
-..+.|.+|+++ |.+|+.+.-.+....+.+++.+...-.++..+..| -.|...+.+++.++.++. ++|+++.-..
T Consensus 19 IG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-l~~~~~v~~~~~~~~~~~g~id~lv~~Ag 94 (264)
T 3i4f_A 19 LGKQVTEKLLAK--GYSVTVTYHSDTTAMETMKETYKDVEERLQFVQAD-VTKKEDLHKIVEEAMSHFGKIDFLINNAG 94 (264)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred hHHHHHHHHHHC--CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEec-CCCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 345677888875 67887665555443444544443322345555533 457888888888777776 6898886553
No 119
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=52.66 E-value=26 Score=30.96 Aligned_cols=20 Identities=5% Similarity=-0.054 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHhCCCEEEEc
Q 025565 97 VAKILKSLVEVEKPGLIILG 116 (251)
Q Consensus 97 ~a~~La~~ik~~~~dlIl~G 116 (251)
+...+.++....++|+||-.
T Consensus 228 ~~~~v~~~t~~~g~d~v~d~ 247 (379)
T 3iup_A 228 FMQDLTEALVSTGATIAFDA 247 (379)
T ss_dssp HHHHHHHHHHHHCCCEEEES
T ss_pred HHHHHHHHhcCCCceEEEEC
Confidence 34555555555678888843
No 120
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=52.29 E-value=1.1e+02 Score=25.89 Aligned_cols=96 Identities=7% Similarity=-0.122 Sum_probs=60.0
Q ss_pred CCHHhHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEE
Q 025565 35 MNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLII 114 (251)
Q Consensus 35 in~~d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl 114 (251)
.+-........+..|+ |.+|++++.+.... .....-...--+++.+..........+...+.+.+++.+||+|.
T Consensus 18 ~gG~~~~~~~l~~~L~----g~~v~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~Dvv~ 91 (394)
T 3okp_A 18 IGGIQSYLRDFIATQD----PESIVVFASTQNAE--EAHAYDKTLDYEVIRWPRSVMLPTPTTAHAMAEIIREREIDNVW 91 (394)
T ss_dssp CSHHHHHHHHHHTTSC----GGGEEEEEECSSHH--HHHHHHTTCSSEEEEESSSSCCSCHHHHHHHHHHHHHTTCSEEE
T ss_pred cchHHHHHHHHHHHhc----CCeEEEEECCCCcc--chhhhccccceEEEEccccccccchhhHHHHHHHHHhcCCCEEE
Confidence 3445556666766662 56899999887642 11222222233555554322334456778888999999999999
Q ss_pred EcceeecCCcCcHHHHHHHHcCCC-cc
Q 025565 115 LGKQAIDDDCNQTGQMVAGLLSWP-QG 140 (251)
Q Consensus 115 ~G~~s~d~~~~~v~~~lA~~Lg~p-~v 140 (251)
+.... .......++.+++.| ++
T Consensus 92 ~~~~~----~~~~~~~~~~~~~~~~~i 114 (394)
T 3okp_A 92 FGAAA----PLALMAGTAKQAGASKVI 114 (394)
T ss_dssp ESSCT----TGGGGHHHHHHTTCSEEE
T ss_pred ECCcc----hHHHHHHHHHhcCCCcEE
Confidence 86632 233566778888988 44
No 121
>1xw8_A UPF0271 protein YBGL; NESG, northeast structural genomics consortium, structural genomics, protein structure initiative, PSI, X-RAY; 2.00A {Escherichia coli} SCOP: c.6.2.5
Probab=52.27 E-value=17 Score=31.08 Aligned_cols=45 Identities=13% Similarity=0.074 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 93 YPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 93 d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
....+|++++++++..+|+|+|+|-. +..--+.|..+|.+++..+
T Consensus 115 ~d~~~A~av~~av~~~d~~L~l~~l~------gs~~~~~A~~~Gl~~~~E~ 159 (252)
T 1xw8_A 115 KEAQLADAIARAVYACDPALILVGLA------GSELIRAGKQYGLTTREEV 159 (252)
T ss_dssp TCHHHHHHHHHHHHHHCTTCEEEEET------TSHHHHHHHHTTCCEEEEE
T ss_pred hCHHHHHHHHHHHHHhCCCcEEEecC------ChHHHHHHHHcCCcEEEEE
Confidence 34578999999999999999999842 2477899999999987544
No 122
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=52.14 E-value=49 Score=27.01 Aligned_cols=74 Identities=4% Similarity=-0.076 Sum_probs=46.0
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCC-CCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG-QLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~-~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-.+.|++|++. |.+|+.+.-..+..++..+++.+.|..++..+..|- ..|.....+.+.++.++. +.|+++.-.
T Consensus 25 G~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nA 100 (252)
T 3f1l_A 25 GREAAMTYARY--GATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNA 100 (252)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 45677788875 678877665554444444555454544444444332 257777777777777776 589888654
No 123
>2x5e_A UPF0271 protein PA4511; unknown function; HET: CIT; 2.30A {Pseudomonas aeruginosa} PDB: 2xu2_A*
Probab=52.06 E-value=11 Score=32.21 Aligned_cols=48 Identities=13% Similarity=-0.028 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 93 YPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 93 d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
....+|++++++++..+|+|+|+|-...|+ ..--+.|..+|.+++..+
T Consensus 126 ~d~~~A~av~~av~~~d~~L~l~~l~~~~g---s~~~~~A~~~Gl~~~~E~ 173 (252)
T 2x5e_A 126 GDDELLRAVLDACAAYRKGLPLMVLALADN---GRELELADEADVPLLFEA 173 (252)
T ss_dssp TCHHHHHHHHHHHHHHCTTCCEEEECCSCC---HHHHHHHHHHTCCEEEEE
T ss_pred hCHHHHHHHHHHHHHhCCCcEEEEeCCCCC---CHHHHHHHHcCCcEEEEE
Confidence 346789999999999999999999643333 477899999999987554
No 124
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=51.85 E-value=69 Score=26.48 Aligned_cols=73 Identities=14% Similarity=0.073 Sum_probs=46.3
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCC--EEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGAD--RGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD--~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.-.++..++..+++...|.. ++..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 19 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~iD~lv~nA 94 (280)
T 1xkq_A 19 GRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVAD-VTTEDGQDQIINSTLKQFGKIDVLVNNA 94 (280)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEec-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 34677788875 678887765544334444444445541 45555433 457788888888877776 589888654
No 125
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=51.75 E-value=55 Score=25.39 Aligned_cols=75 Identities=19% Similarity=0.197 Sum_probs=42.5
Q ss_pred eEEEEeeCCch--------hHHHHHHHH-HCCCCEEE--EEeeCCCCCHHHHHHHHHHHHHHhCCCEEEE-cceeecCCc
Q 025565 57 EVVAVSMGPAQ--------CVDTLRTGL-AMGADRGV--HVEAAGQLYPLTVAKILKSLVEVEKPGLIIL-GKQAIDDDC 124 (251)
Q Consensus 57 ~V~al~~G~~~--------~~~~l~~~l-a~GaD~vi--~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~-G~~s~d~~~ 124 (251)
+|..++.|++- ....+...+ ++|++-.. .+.| |.+.+.++|.+++++.++|+|++ |.++.+. .
T Consensus 3 ~v~Ii~tGdEl~~G~i~D~n~~~l~~~l~~~G~~v~~~~iv~D----d~~~i~~~l~~~~~~~~~DlVittGG~g~g~-~ 77 (164)
T 2is8_A 3 RVGILTVSDKGFRGERQDTTHLAIREVLAGGPFEVAAYELVPD----EPPMIKKVLRLWADREGLDLILTNGGTGLAP-R 77 (164)
T ss_dssp EEEEEEECHHHHHTSSCCCHHHHHHHHHTTSSEEEEEEEEECS----CHHHHHHHHHHHHHTSCCSEEEEESCCSSST-T
T ss_pred EEEEEEEcCcccCCCcccchHHHHHHHHHHCCCeEeEEEEcCC----CHHHHHHHHHHHHhcCCCCEEEEcCCCCCCC-C
Confidence 45666777641 123455544 47875433 2332 57788888888776446897765 5555442 2
Q ss_pred CcHHHHHHHHcC
Q 025565 125 NQTGQMVAGLLS 136 (251)
Q Consensus 125 ~~v~~~lA~~Lg 136 (251)
-.+...++..++
T Consensus 78 D~t~ea~~~~~~ 89 (164)
T 2is8_A 78 DRTPEATRELLD 89 (164)
T ss_dssp CCHHHHHHTTCS
T ss_pred CChHHHHHHHhC
Confidence 345555555443
No 126
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=51.40 E-value=58 Score=27.00 Aligned_cols=73 Identities=14% Similarity=0.095 Sum_probs=45.2
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHH-CCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLA-MGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la-~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+.+.-..+..++..+++.. .|. ++..+..| -.|...+...+.++.++. +.|+++.-.
T Consensus 39 IG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 113 (277)
T 4fc7_A 39 IGFRIAEIFMRH--GCHTVIASRSLPRVLTAARKLAGATGR-RCLPLSMD-VRAPPAVMAAVDQALKEFGRIDILINCA 113 (277)
T ss_dssp HHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345677778775 66777665554433444444433 344 45555433 457788888888887776 689888654
No 127
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=51.33 E-value=48 Score=27.65 Aligned_cols=73 Identities=16% Similarity=0.171 Sum_probs=43.9
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
--..+.|.+|+++ |.+|+++.-.++..++..+++...| ++..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 40 gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 113 (276)
T 2b4q_A 40 GIGQMIAQGLLEA--GARVFICARDAEACADTATRLSAYG--DCQAIPAD-LSSEAGARRLAQALGELSARLDILVNNA 113 (276)
T ss_dssp HHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCC-TTSHHHHHHHHHHHHHHCSCCSEEEECC
T ss_pred hHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEee-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 3345677788875 6677766554433333334443345 45555433 457777777777777765 689888654
No 128
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=51.07 E-value=84 Score=25.59 Aligned_cols=72 Identities=10% Similarity=0.024 Sum_probs=45.8
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHH-CCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLA-MGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la-~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+.+.-... ..+.+.+... .|..++..+..| -.|...+.+.+.++.++. .+|+++...
T Consensus 22 G~~ia~~l~~~--G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~li~~A 95 (266)
T 3oig_A 22 AWGIARSLHEA--GARLIFTYAGER-LEKSVHELAGTLDRNDSIILPCD-VTNDAEIETCFASIKEQVGVIHGIAHCI 95 (266)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSGG-GHHHHHHHHHTSSSCCCEEEECC-CSSSHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEecCchH-HHHHHHHHHHhcCCCCceEEeCC-CCCHHHHHHHHHHHHHHhCCeeEEEEcc
Confidence 35677888875 678877655543 3444554443 455466666544 456777777787777776 589887654
No 129
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=50.96 E-value=85 Score=24.40 Aligned_cols=76 Identities=14% Similarity=0.122 Sum_probs=42.9
Q ss_pred ceEEEEeeCCch------hHHHHHH-HHHCCCCEEE--EEeeCCCCCHHHHHHHHHHHHHHhCCCEEEE-cceeecCCcC
Q 025565 56 SEVVAVSMGPAQ------CVDTLRT-GLAMGADRGV--HVEAAGQLYPLTVAKILKSLVEVEKPGLIIL-GKQAIDDDCN 125 (251)
Q Consensus 56 ~~V~al~~G~~~------~~~~l~~-~la~GaD~vi--~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~-G~~s~d~~~~ 125 (251)
-+|..++.|++- ....+.. +.++|++-.. .+.| |.+.+..+|.++++..++|+|++ |.++.+. --
T Consensus 14 ~rv~Ii~tGdElg~i~Dsn~~~l~~~L~~~G~~v~~~~iv~D----d~~~i~~~l~~~~~~~~~DlVittGG~g~g~-~D 88 (169)
T 1y5e_A 14 VRCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTSYEIVKD----DKESIQQAVLAGYHKEDVDVVLTNGGTGITK-RD 88 (169)
T ss_dssp CEEEEEEECSSCCTTTCHHHHHHHHHHHHHTCEEEEEEEECS----SHHHHHHHHHHHHTCTTCSEEEEECCCSSST-TC
T ss_pred CEEEEEEEcCccCeeccChHHHHHHHHHHCCCeEeEEEEeCC----CHHHHHHHHHHHHhcCCCCEEEEcCCCCCCC-CC
Confidence 367788888752 1223444 4457876433 2332 57778888888776446887766 5554442 23
Q ss_pred cHHHHHHHHcC
Q 025565 126 QTGQMVAGLLS 136 (251)
Q Consensus 126 ~v~~~lA~~Lg 136 (251)
.+.-.++..++
T Consensus 89 ~t~ea~~~~~~ 99 (169)
T 1y5e_A 89 VTIEAVSALLD 99 (169)
T ss_dssp CHHHHHHTTCS
T ss_pred CcHHHHHHHcC
Confidence 34444544443
No 130
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=50.43 E-value=81 Score=26.31 Aligned_cols=73 Identities=15% Similarity=0.169 Sum_probs=46.9
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|++|++. |.+|+.+.-..+..++...++.+.|.. +..+..| -.|...+..++.++.++. +.|+++.-.
T Consensus 40 IG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lVnnA 113 (283)
T 3v8b_A 40 IGRATALALAAD--GVTVGALGRTRTEVEEVADEIVGAGGQ-AIALEAD-VSDELQMRNAVRDLVLKFGHLDIVVANA 113 (283)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHTTTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcc-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 345677888875 667777665544444444555455544 4444433 457888888888888776 689888644
No 131
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=50.37 E-value=1.1e+02 Score=25.46 Aligned_cols=72 Identities=11% Similarity=0.089 Sum_probs=47.3
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|++|+++ |.+|+.+.-..+..++..+++...|.. +..+..| -.|...+.+.+.++.++. +.|+++...
T Consensus 45 G~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-l~d~~~v~~~~~~~~~~~g~iD~lvnnA 117 (276)
T 3r1i_A 45 GKKVALAYAEA--GAQVAVAARHSDALQVVADEIAGVGGK-ALPIRCD-VTQPDQVRGMLDQMTGELGGIDIAVCNA 117 (276)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCC-CEEEECC-TTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 35677788875 667777766655555555666566643 3444433 457777888888877776 689888654
No 132
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=50.24 E-value=51 Score=23.08 Aligned_cols=63 Identities=11% Similarity=0.119 Sum_probs=35.5
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCC-CHHHHHHHHHHHHHH
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQL-YPLTVAKILKSLVEV 107 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~-d~~a~a~~La~~ik~ 107 (251)
+...++...+|++.++...+++++-... .+...+++..|++..+. . .+ +......++..+++.
T Consensus 63 ~~~g~~~~~~l~~~~~~~~ii~~t~~~~--~~~~~~~~~~g~~~~l~-K---P~~~~~~l~~~i~~~l~~ 126 (130)
T 3eod_A 63 RMNGLKLLEHIRNRGDQTPVLVISATEN--MADIAKALRLGVEDVLL-K---PVKDLNRLREMVFACLYP 126 (130)
T ss_dssp ---CHHHHHHHHHTTCCCCEEEEECCCC--HHHHHHHHHHCCSEEEE-S---CC---CHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHhcCCCCCEEEEEcCCC--HHHHHHHHHcCCCEEEe-C---CCCcHHHHHHHHHHHhch
Confidence 3445666667776544556665554442 45667888899997544 2 23 556666677666654
No 133
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=49.74 E-value=1.2e+02 Score=25.55 Aligned_cols=76 Identities=9% Similarity=0.040 Sum_probs=49.5
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
.--..+.|.+|+++ |.+|+.+.-..+..++..+++-..|.+- ..+..| -.|...+.+++.++.++. ++|+++.-.
T Consensus 41 ~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~D-v~d~~~v~~~~~~~~~~~g~id~lvnnA 116 (301)
T 3tjr_A 41 SGIGLATATEFARR--GARLVLSDVDQPALEQAVNGLRGQGFDA-HGVVCD-VRHLDEMVRLADEAFRLLGGVDVVFSNA 116 (301)
T ss_dssp SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCE-EEEECC-TTCHHHHHHHHHHHHHHHSSCSEEEECC
T ss_pred CHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCce-EEEEcc-CCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 34456778888875 6788777666554455555666667653 333323 457777778887777776 689888755
Q ss_pred e
Q 025565 118 Q 118 (251)
Q Consensus 118 ~ 118 (251)
.
T Consensus 117 g 117 (301)
T 3tjr_A 117 G 117 (301)
T ss_dssp C
T ss_pred C
Confidence 3
No 134
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=49.64 E-value=32 Score=29.79 Aligned_cols=33 Identities=12% Similarity=0.085 Sum_probs=18.4
Q ss_pred CCceEEEEeeCCchh-HHHHHHHHHCCCCEEEEEe
Q 025565 54 LASEVVAVSMGPAQC-VDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 54 ~g~~V~al~~G~~~~-~~~l~~~la~GaD~vi~v~ 87 (251)
.|++++.++-|.... .-+++-|.++|+ +++.+.
T Consensus 163 ~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~ 196 (349)
T 3pi7_A 163 EGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTV 196 (349)
T ss_dssp HCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEe
Confidence 454555554444332 234455667788 777765
No 135
>1v6t_A Hypothetical UPF0271 protein PH0986; TIM-barrel, lactam utilization protein, structural genomics; 1.70A {Pyrococcus horikoshii} SCOP: c.6.2.5
Probab=49.22 E-value=19 Score=30.82 Aligned_cols=44 Identities=11% Similarity=-0.017 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 94 PLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 94 ~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
...+|++++++++..+|+|+|+|-. +..--+.|..+|.+++..+
T Consensus 121 d~~~A~av~~av~~~d~~L~l~~l~------gs~~~~~A~~~Gl~~~~E~ 164 (255)
T 1v6t_A 121 EEDLARAVIEGILDFDKDLILVTLS------NSRVADIAEEMGLKVAHEV 164 (255)
T ss_dssp CHHHHHHHHHHHHHHCTTCEEEEET------TCHHHHHHHHHTCCEEEEE
T ss_pred CHHHHHHHHHHHHHhCCCcEEEecC------ChHHHHHHHHcCCcEEEEE
Confidence 3578999999999999999999842 2477899999999987554
No 136
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=49.18 E-value=1e+02 Score=24.77 Aligned_cols=73 Identities=11% Similarity=0.089 Sum_probs=48.6
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+.+.-..+..++..+++...|. ++..+..| -.|...+.+.+.++.++. ++|+++...
T Consensus 21 iG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~li~~A 94 (253)
T 3qiv_A 21 IGQAYAEALARE--GAAVVVADINAEAAEAVAKQIVADGG-TAISVAVD-VSDPESAKAMADRTLAEFGGIDYLVNNA 94 (253)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345678888885 67887776655444555555656554 45555533 457777778877777776 699888755
No 137
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=47.79 E-value=1.2e+02 Score=25.04 Aligned_cols=73 Identities=15% Similarity=0.166 Sum_probs=45.5
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCch-hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQ-CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~-~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|++|+++ |.+|+.+.--... .++..+++...|.. +..+..| -.|...+.+.+.++.++. +.|+++.-.
T Consensus 40 IG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-~~d~~~v~~~~~~~~~~~g~id~lv~nA 114 (269)
T 4dmm_A 40 IGRAIALELAAA--GAKVAVNYASSAGAADEVVAAIAAAGGE-AFAVKAD-VSQESEVEALFAAVIERWGRLDVLVNNA 114 (269)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhcCCc-EEEEECC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345677888875 6777765552322 33334444455654 4444433 567888888888887776 689888654
No 138
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=47.76 E-value=1.1e+02 Score=25.35 Aligned_cols=72 Identities=7% Similarity=0.108 Sum_probs=42.9
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
..+.|++|+++ |.+|+.+.-.++..++..+++.+.|.. +..+..| -.|.......+.++.+..+.|+++.-.
T Consensus 46 G~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-v~~~~~~~~~~~~~~~~g~iD~lvnnA 117 (275)
T 4imr_A 46 GAAIAEGLAGA--GAHVILHGVKPGSTAAVQQRIIASGGT-AQELAGD-LSEAGAGTDLIERAEAIAPVDILVINA 117 (275)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSTTTTHHHHHHHHHTTCC-EEEEECC-TTSTTHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCe-EEEEEec-CCCHHHHHHHHHHHHHhCCCCEEEECC
Confidence 35667777775 667777776665555556666666654 3333323 334555555665555544688887644
No 139
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=47.66 E-value=87 Score=25.90 Aligned_cols=73 Identities=11% Similarity=0.017 Sum_probs=45.5
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+.+.-..+..++..+++...|..- ..+..| -.|...+...+.++.++. +.|+++.-.
T Consensus 40 IG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 113 (270)
T 3ftp_A 40 IGRAIALELARR--GAMVIGTATTEAGAEGIGAAFKQAGLEG-RGAVLN-VNDATAVDALVESTLKEFGALNVLVNNA 113 (270)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHTCCC-EEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcE-EEEEEe-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345677788875 6677766655444444445555556542 223222 457778888888877776 589888654
No 140
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=47.45 E-value=1.1e+02 Score=24.53 Aligned_cols=72 Identities=8% Similarity=0.034 Sum_probs=47.3
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|++. |.+|+.+.-.+...++..+++...|.+ +..+..| -.|...+.+.+.++.++. ++|+++.-.
T Consensus 18 G~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~~~id~li~~A 90 (247)
T 3lyl_A 18 GFEVAHALASK--GATVVGTATSQASAEKFENSMKEKGFK-ARGLVLN-ISDIESIQNFFAEIKAENLAIDILVNNA 90 (247)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHTTCCCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 35677888875 678877766655445555566666755 4444433 457777777777777665 589888654
No 141
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=47.40 E-value=89 Score=25.47 Aligned_cols=72 Identities=11% Similarity=0.046 Sum_probs=45.9
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+.+.-..+..++...++-+.|. ++..+..| -.|...+...+.++.++. +.|+++.-.
T Consensus 19 G~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 91 (257)
T 3imf_A 19 GKGMATRFAKE--GARVVITGRTKEKLEEAKLEIEQFPG-QILTVQMD-VRNTDDIQKMIEQIDEKFGRIDILINNA 91 (257)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCSTT-CEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 45677888885 67887766554443444444444554 45555433 557788888888877776 689888644
No 142
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=47.35 E-value=1.3e+02 Score=25.59 Aligned_cols=75 Identities=12% Similarity=0.007 Sum_probs=47.9
Q ss_pred HHHHHHhhhhCCCceEEEE---eeCC--------chhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CC
Q 025565 43 LEEALRIKESGLASEVVAV---SMGP--------AQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KP 110 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al---~~G~--------~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~ 110 (251)
+....+.+.+ .|.+|.+- ++|. +.+.+.++.+..+|+|.+.+.+.-....|..+.+.+.++.+.. +.
T Consensus 126 ~~~~v~~a~~-~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~ 204 (302)
T 2ftp_A 126 FVPVLEAARQ-HQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRE 204 (302)
T ss_dssp HHHHHHHHHH-TTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGG
T ss_pred HHHHHHHHHH-CCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCC
Confidence 3444555555 57676421 2342 2345567777799999888875434568998888888776665 34
Q ss_pred CEEEEcce
Q 025565 111 GLIILGKQ 118 (251)
Q Consensus 111 dlIl~G~~ 118 (251)
.+.+=++.
T Consensus 205 ~l~~H~Hn 212 (302)
T 2ftp_A 205 RLAGHFHD 212 (302)
T ss_dssp GEEEEEBC
T ss_pred eEEEEeCC
Confidence 57776664
No 143
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=47.35 E-value=1.2e+02 Score=25.04 Aligned_cols=72 Identities=13% Similarity=0.123 Sum_probs=44.5
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCch-hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQ-CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~-~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|++|+++ |.+|+.+..-... .++...++-..|.. +..+..| ..|...+.+++.++.++. +.|+++.-.
T Consensus 44 G~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 117 (271)
T 3v2g_A 44 GAAIAKRLALE--GAAVALTYVNAAERAQAVVSEIEQAGGR-AVAIRAD-NRDAEAIEQAIRETVEALGGLDILVNSA 117 (271)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCc-EEEEECC-CCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 35677778875 6676665444322 23344445555654 4444433 457888888888888776 689888654
No 144
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=47.29 E-value=59 Score=29.11 Aligned_cols=72 Identities=21% Similarity=0.185 Sum_probs=43.0
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
...++..++.+++ .|.+++++.-.+.......+ -+|+.+.+......+.+.-...|.+++++.++|+|+.|.
T Consensus 15 g~~a~~i~~aa~~--~G~~~v~v~~~~~~~~~~~~-----~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~i~p~~ 86 (446)
T 3ouz_A 15 GEIALRALRTIKE--MGKKAICVYSEADKDALYLK-----YADASICIGKARSSESYLNIPAIIAAAEIAEADAIFPGY 86 (446)
T ss_dssp HHHHHHHHHHHHH--TTCEEEEEEEGGGTTCTHHH-----HSSEEEEEECCTTTTGGGCHHHHHHHHHHHTCSEEECCS
T ss_pred CHHHHHHHHHHHH--cCCEEEEEEcCcccccchHh-----hCCEEEEcCCCCccccccCHHHHHHHHHHhCcCEEEECC
Confidence 3466777777776 47788877544321111111 269988885322222333335677888888999998663
No 145
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=47.28 E-value=77 Score=27.24 Aligned_cols=126 Identities=11% Similarity=-0.015 Sum_probs=72.5
Q ss_pred EEEeeccCCCceEEecCCCe-EEccCCccCCCHHhHHHHH---HHHHhhhhCCCceEEEEe--eC-----------Cc-h
Q 025565 6 AIKRVVDYAVKIRVKSDRTG-VETNNVKMSMNPFCEIALE---EALRIKESGLASEVVAVS--MG-----------PA-Q 67 (251)
Q Consensus 6 ~~K~Vpd~~~~~~~~~~~~~-~~~~~~~~~in~~d~~Ale---~A~~lae~~~g~~V~al~--~G-----------~~-~ 67 (251)
-+++-||-+..+++..++.. +-.+. .-.|.+.+.+| ..-.+++. ...+++++. +| .+ .
T Consensus 28 ~~~~F~dGE~~v~i~e~g~dV~iiqs---~~~p~nd~lmeLl~~ida~k~~-~A~~it~ViPY~~YaRQDr~~~~~e~is 103 (286)
T 3lrt_A 28 DERRFPDGELYLRYDEDLTGHNIFII---GNTHSDAEVMEMILTLSAIQDY-RTKSVNIIAPYYGYARQHQRYKNGEPIS 103 (286)
T ss_dssp EEEECTTSCEEEECCSCCTTSEEEEE---CCCCSHHHHHHHHHHHHHGGGS-CCSEEEEEESSCTTTTCCSCSSTTCCCH
T ss_pred EEEECCCCCEEEEEcCCCCcEEEEEe---CCCCCcHHHHHHHHHHHHHHHc-CCCEEEEEecCcccccCcccCCCCCccc
Confidence 46788888766776544221 11111 11234444443 33344443 235788774 22 12 2
Q ss_pred hHHHHHHHHHCCCCEEEEEeeCC-----CCC----HHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCC
Q 025565 68 CVDTLRTGLAMGADRGVHVEAAG-----QLY----PLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWP 138 (251)
Q Consensus 68 ~~~~l~~~la~GaD~vi~v~~~~-----~~d----~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p 138 (251)
+.-.++.+-.+ +|+++.++-.. .++ ...-+..|++.+++.++++|+... ..+-..+..+|.+||.|
T Consensus 104 ak~vA~ll~~~-~d~vit~DlH~~~iq~ff~~pvd~l~~~~~la~~i~~~~~~vVV~pd----~Gg~~~A~~lA~~L~~p 178 (286)
T 3lrt_A 104 SQILTEIYSSY-SNSIATVDIHDEKTLSYSKVKFSDLHANDAIVRYYKNVDVDYVVSPD----DGGLARVADISAKLGKK 178 (286)
T ss_dssp HHHHHHHHHHT-CSEEEEESCSCGGGGGGCSSEEEEECCHHHHHHHHTTSCCSEEEESS----SSSHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHH-hCeEEEecCChHHHhhhcCCcEEEeecHHHHHHHHHhcCCCEEEEEC----CCccHHHHHHHHHhCCC
Confidence 33334444467 99999997422 122 222356788888776777777554 34567899999999998
Q ss_pred cc
Q 025565 139 QG 140 (251)
Q Consensus 139 ~v 140 (251)
++
T Consensus 179 ~~ 180 (286)
T 3lrt_A 179 HF 180 (286)
T ss_dssp EE
T ss_pred eE
Confidence 64
No 146
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=47.14 E-value=92 Score=25.32 Aligned_cols=72 Identities=10% Similarity=0.166 Sum_probs=44.4
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHC--CCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAM--GADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~--GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.-.++..++..+++... |. ++..+..| -.|...+..++.++.++.+.|+++.-.
T Consensus 20 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~gid~lv~~A 93 (260)
T 2z1n_A 20 GFASALELARN--GARLLLFSRNREKLEAAASRIASLVSGA-QVDIVAGD-IREPGDIDRLFEKARDLGGADILVYST 93 (260)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTC-CEEEEECC-TTCHHHHHHHHHHHHHTTCCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCC-eEEEEEcc-CCCHHHHHHHHHHHHHhcCCCEEEECC
Confidence 35677788875 678877765543333333333222 32 45555433 457888888888887777899888754
No 147
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=46.82 E-value=77 Score=22.67 Aligned_cols=64 Identities=14% Similarity=0.091 Sum_probs=42.8
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE 108 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~ 108 (251)
+...++...+|++.++...|+.++--. ..+...+++..|++..+. . .++.......|..+++..
T Consensus 79 ~~~g~~~~~~l~~~~~~~~ii~lt~~~--~~~~~~~~~~~ga~~~l~-K---p~~~~~L~~~i~~~~~~~ 142 (146)
T 4dad_A 79 DTAELAAIEKLSRLHPGLTCLLVTTDA--SSQTLLDAMRAGVRDVLR-W---PLEPRALDDALKRAAAQC 142 (146)
T ss_dssp CHHHHHHHHHHHHHCTTCEEEEEESCC--CHHHHHHHHTTTEEEEEE-S---SCCHHHHHHHHHHHHHTC
T ss_pred CccHHHHHHHHHHhCCCCcEEEEeCCC--CHHHHHHHHHhCCceeEc-C---CCCHHHHHHHHHHHHhhh
Confidence 455677777787764455565555433 246778899999986443 2 467888888888877654
No 148
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=46.67 E-value=1.2e+02 Score=24.95 Aligned_cols=73 Identities=16% Similarity=0.144 Sum_probs=46.8
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+++.-.++..++..+++-..|.+ +..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 34 IG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~g~iD~lv~~A 107 (277)
T 2rhc_B 34 IGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVE-ADGRTCD-VRSVPEIEALVAAVVERYGPVDVLVNNA 107 (277)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHTCSCSEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEECC-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 345677788875 678887766654444444555555654 4444433 457778888888877776 589888654
No 149
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=46.50 E-value=1.3e+02 Score=25.28 Aligned_cols=84 Identities=12% Similarity=0.000 Sum_probs=46.9
Q ss_pred ceEEEEeeCCchhHHHHHH-HHHCCCCEEEEEeeCCC--------CCHHHHHHHHHHHHHHhCCCEEEEc-ceeecCCcC
Q 025565 56 SEVVAVSMGPAQCVDTLRT-GLAMGADRGVHVEAAGQ--------LYPLTVAKILKSLVEVEKPGLIILG-KQAIDDDCN 125 (251)
Q Consensus 56 ~~V~al~~G~~~~~~~l~~-~la~GaD~vi~v~~~~~--------~d~~a~a~~La~~ik~~~~dlIl~G-~~s~d~~~~ 125 (251)
.+|-.++--.....+..++ .-++|.+ ++....... .+...+.+++.++ ...+.|.|++| +|-... -
T Consensus 147 ~rvgvltp~~~~~~~~~~~~l~~~Gi~-v~~~~~~~~~~~~~~g~~~~~~l~~~~~~l-~~~gadaIvLg~CT~l~~--~ 222 (273)
T 2xed_A 147 QRVALVTPYMRPLAEKVVAYLEAEGFT-ISDWRALEVADNTEVGCIPGEQVMAAARSL-DLSEVDALVISCAVQMPS--L 222 (273)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHTTCE-EEEEEECCCCBHHHHHTCCHHHHHHHHHHS-CCTTCSEEEEESSSSSCC--T
T ss_pred CeEEEEcCChhhhHHHHHHHHHHCCCE-EeccccCCCccchhhcccCHHHHHHHHHHH-hhCCCCEEEEcCCCCcch--H
Confidence 4666666444332334444 4458987 333332222 2444444433333 33479999999 875332 2
Q ss_pred cHHHHHHHHcCCCcccce
Q 025565 126 QTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 126 ~v~~~lA~~Lg~p~vt~v 143 (251)
.+...+...+|.|+++..
T Consensus 223 ~~~~~le~~lg~PVids~ 240 (273)
T 2xed_A 223 PLVETAEREFGIPVLSAA 240 (273)
T ss_dssp THHHHHHHHHSSCEEEHH
T ss_pred HhHHHHHHHhCCCEEcHH
Confidence 356778888999987544
No 150
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=46.19 E-value=44 Score=29.40 Aligned_cols=90 Identities=12% Similarity=0.029 Sum_probs=45.8
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCC--------C-C-CHHHHHHHHHHHHHH----
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG--------Q-L-YPLTVAKILKSLVEV---- 107 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~--------~-~-d~~a~a~~La~~ik~---- 107 (251)
.+..|..|+++ |.+|+.++-+. ..+. .-+.|.+-.-+-.+.. . . -.......+.+..+.
T Consensus 17 ~~~La~~L~~~--Gh~V~v~~~~~--~~~~---v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 89 (404)
T 3h4t_A 17 LVALAARLREL--GADARMCLPPD--YVER---CAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVAEWFDKVPAA 89 (404)
T ss_dssp HHHHHHHHHHT--TCCEEEEECGG--GHHH---HHHTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC--CCeEEEEeCHH--HHHH---HHHcCCceeecCCCHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677788775 67888766432 2333 3346876443322110 0 0 011112222222211
Q ss_pred -hCCCEEEEcceeecCCcCcHHHHHHHHcCCCccc
Q 025565 108 -EKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGT 141 (251)
Q Consensus 108 -~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 141 (251)
.+||+|+..... ..+..+..+|+++|+|+++
T Consensus 90 ~~~pD~Vi~~~~~---~~~~~a~~~A~~lgiP~v~ 121 (404)
T 3h4t_A 90 IEGCDAVVTTGLL---PAAVAVRSMAEKLGIPYRY 121 (404)
T ss_dssp HTTCSEEEEEECH---HHHHHHHHHHHHHTCCEEE
T ss_pred hcCCCEEEECCch---hhhhhhhhHHhhcCCCEEE
Confidence 379999874321 1112337889999999983
No 151
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=45.78 E-value=1e+02 Score=25.16 Aligned_cols=60 Identities=5% Similarity=-0.010 Sum_probs=40.1
Q ss_pred ceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 56 SEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 56 ~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
.+|.+|.-.++. ...++.|..+|..-. .++.....+...+...+.+.+++.+||+|++-+
T Consensus 29 ~~i~~Vvs~~~~-~~~~~~A~~~gIp~~-~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~a~ 88 (216)
T 2ywr_A 29 ASIELVISDNPK-AYAIERCKKHNVECK-VIQRKEFPSKKEFEERMALELKKKGVELVVLAG 88 (216)
T ss_dssp EEEEEEEESCTT-CHHHHHHHHHTCCEE-ECCGGGSSSHHHHHHHHHHHHHHTTCCEEEESS
T ss_pred CeEEEEEeCCCC-hHHHHHHHHcCCCEE-EeCcccccchhhhhHHHHHHHHhcCCCEEEEeC
Confidence 477777666544 245677888998843 333211234556667788889999999999865
No 152
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=45.74 E-value=1.3e+02 Score=24.83 Aligned_cols=73 Identities=11% Similarity=0.157 Sum_probs=45.7
Q ss_pred HHHHHHHHhhhhCCCceEEEEee-------------CCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHH
Q 025565 41 IALEEALRIKESGLASEVVAVSM-------------GPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEV 107 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~-------------G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~ 107 (251)
--.+.|++|+++ |.+|+++.. ..+..++..+.+...|.. +..+..| -.|...+.+.+.++.++
T Consensus 27 IG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~ 102 (280)
T 3pgx_A 27 QGRSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRK-ALTRVLD-VRDDAALRELVADGMEQ 102 (280)
T ss_dssp HHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCC-EEEEECC-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCe-EEEEEcC-CCCHHHHHHHHHHHHHH
Confidence 345678888875 678877654 222233344444455654 4444433 45788888888888777
Q ss_pred h-CCCEEEEcc
Q 025565 108 E-KPGLIILGK 117 (251)
Q Consensus 108 ~-~~dlIl~G~ 117 (251)
. +.|+++...
T Consensus 103 ~g~id~lvnnA 113 (280)
T 3pgx_A 103 FGRLDVVVANA 113 (280)
T ss_dssp HCCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 6 689888654
No 153
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=45.63 E-value=1e+02 Score=23.88 Aligned_cols=64 Identities=9% Similarity=0.113 Sum_probs=37.6
Q ss_pred ceEEEEeeCCchh-------------HHHHH-HHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEE-cceee
Q 025565 56 SEVVAVSMGPAQC-------------VDTLR-TGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIIL-GKQAI 120 (251)
Q Consensus 56 ~~V~al~~G~~~~-------------~~~l~-~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~-G~~s~ 120 (251)
-+|..+++|+... ...+. .+.++|++-....--+ -|.+....++.++....++|+|++ |..+.
T Consensus 16 ~~v~iitvsd~~~~~~~~~g~i~D~ng~~L~~~L~~~G~~v~~~~iV~--Dd~~~i~~al~~~~a~~~~DlVittGG~g~ 93 (178)
T 3iwt_A 16 LNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVP--DDKIKILKAFTDALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp CEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEEC--SCHHHHHHHHHHHHTCTTCCEEEEESCCSS
T ss_pred CEEEEEEEcCCCccccccCCCCCcchHHHHHHHHHHCCCEEEEEEEeC--CCHHHHHHHHHHHHhcCCCCEEEecCCccc
Confidence 4688888886321 12344 4556898754432211 156677777777666667998876 44443
Q ss_pred c
Q 025565 121 D 121 (251)
Q Consensus 121 d 121 (251)
+
T Consensus 94 ~ 94 (178)
T 3iwt_A 94 S 94 (178)
T ss_dssp S
T ss_pred C
Confidence 3
No 154
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=45.59 E-value=1.2e+02 Score=24.55 Aligned_cols=73 Identities=15% Similarity=0.092 Sum_probs=45.9
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
--.+.|.+|+++ |.+|+++.-.++..++..+++...|.+ +..+..| -.|.......+.++.++. ++|+++.-.
T Consensus 26 IG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~g~iD~lv~~A 99 (260)
T 2zat_A 26 IGLAIARRLAQD--GAHVVVSSRKQENVDRTVATLQGEGLS-VTGTVCH-VGKAEDRERLVAMAVNLHGGVDILVSNA 99 (260)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345677788875 678887766544344444555555654 4444333 457777777787777776 689888644
No 155
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=45.53 E-value=1.3e+02 Score=25.07 Aligned_cols=73 Identities=11% Similarity=0.160 Sum_probs=47.3
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeC------------CchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh
Q 025565 41 IALEEALRIKESGLASEVVAVSMG------------PAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE 108 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G------------~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~ 108 (251)
--.+.|++|++. |.+|+++... .+..++..+++-..|.. +..+..| -.|...+...+.++.++.
T Consensus 40 IG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~ 115 (299)
T 3t7c_A 40 QGRSHAITLARE--GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRR-IIASQVD-VRDFDAMQAAVDDGVTQL 115 (299)
T ss_dssp HHHHHHHHHHHT--TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC--CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCc-eEEEECC-CCCHHHHHHHHHHHHHHh
Confidence 345678888885 6788876554 22234445555566654 4444433 557888888888887776
Q ss_pred -CCCEEEEcc
Q 025565 109 -KPGLIILGK 117 (251)
Q Consensus 109 -~~dlIl~G~ 117 (251)
+.|+++.-.
T Consensus 116 g~iD~lv~nA 125 (299)
T 3t7c_A 116 GRLDIVLANA 125 (299)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 689887644
No 156
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=45.29 E-value=1.3e+02 Score=24.69 Aligned_cols=73 Identities=12% Similarity=0.096 Sum_probs=45.0
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHH-HHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLR-TGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~-~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|++|+++ |.+|+.+.-.+....+.+. ..-..|.. +..+..| ..|...+.+.+.++.++. +.|+++.-.
T Consensus 41 IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~li~nA 115 (271)
T 4iin_A 41 IGAEIAKTLASM--GLKVWINYRSNAEVADALKNELEEKGYK-AAVIKFD-AASESDFIEAIQTIVQSDGGLSYLVNNA 115 (271)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCc-eEEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 345778888875 6677776654433333333 34445544 4444433 457777778887777765 689888654
No 157
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=45.16 E-value=1.4e+02 Score=25.24 Aligned_cols=73 Identities=12% Similarity=0.180 Sum_probs=43.5
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeC------------CchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh
Q 025565 41 IALEEALRIKESGLASEVVAVSMG------------PAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE 108 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G------------~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~ 108 (251)
-..+.|.+|+++ |.+|+++... .+..++..+.+...|.. +..+..| -.|...+...+.++.++.
T Consensus 58 IG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~ 133 (317)
T 3oec_A 58 QGRTHAVRLAQD--GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR-IIARQAD-VRDLASLQAVVDEALAEF 133 (317)
T ss_dssp HHHHHHHHHHHT--TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC--CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCe-EEEEECC-CCCHHHHHHHHHHHHHHc
Confidence 345677777775 6677766443 12223333444455544 4444433 457777888888887776
Q ss_pred -CCCEEEEcc
Q 025565 109 -KPGLIILGK 117 (251)
Q Consensus 109 -~~dlIl~G~ 117 (251)
+.|+++.-.
T Consensus 134 g~iD~lVnnA 143 (317)
T 3oec_A 134 GHIDILVSNV 143 (317)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 689888654
No 158
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=45.13 E-value=1.2e+02 Score=24.58 Aligned_cols=75 Identities=11% Similarity=0.061 Sum_probs=47.8
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
.--..+.|.+|+++ |.+|+.+.-..+..++..+++...|. ++..+..| -.|...+..++.++.++. .+|+++...
T Consensus 39 ~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lv~~A 114 (262)
T 3rkr_A 39 RGIGAAIARKLGSL--GARVVLTARDVEKLRAVEREIVAAGG-EAESHACD-LSHSDAIAAFATGVLAAHGRCDVLVNNA 114 (262)
T ss_dssp SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECC-TTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred ChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEec-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 33446677888875 66777665554444445555556664 45444433 457778888888777776 689888654
No 159
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=45.11 E-value=96 Score=26.75 Aligned_cols=32 Identities=31% Similarity=0.367 Sum_probs=18.2
Q ss_pred CCceEEEEeeCCchh-HHHHHHHHHCCCCEEEEEe
Q 025565 54 LASEVVAVSMGPAQC-VDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 54 ~g~~V~al~~G~~~~-~~~l~~~la~GaD~vi~v~ 87 (251)
.|.+|.. +|.... .-+++-|.++|+.+++.++
T Consensus 171 ~g~~VlV--~GaG~vG~~aiqlak~~Ga~~Vi~~~ 203 (356)
T 1pl8_A 171 LGHKVLV--CGAGPIGMVTLLVAKAMGAAQVVVTD 203 (356)
T ss_dssp TTCEEEE--ECCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCEEEE--ECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 4555544 343221 2345556678988888775
No 160
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=45.11 E-value=1.2e+02 Score=24.59 Aligned_cols=75 Identities=16% Similarity=0.111 Sum_probs=48.1
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
.+++|-.+.+-.+ .+.+|.+|.--++.+ ..++.|..+|..- +.++.....+...+...+.+.+++.+||+|++-.
T Consensus 13 nl~ali~~~~~~~--~~~~i~~Vis~~~~~-~~~~~A~~~gIp~-~~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~ag 87 (212)
T 1jkx_A 13 NLQAIIDACKTNK--IKGTVRAVFSNKADA-FGLERARQAGIAT-HTLIASAFDSREAYDRELIHEIDMYAPDVVVLAG 87 (212)
T ss_dssp HHHHHHHHHHTTS--SSSEEEEEEESCTTC-HHHHHHHHTTCEE-EECCGGGCSSHHHHHHHHHHHHGGGCCSEEEESS
T ss_pred HHHHHHHHHHcCC--CCceEEEEEeCCCch-HHHHHHHHcCCcE-EEeCcccccchhhccHHHHHHHHhcCCCEEEEeC
Confidence 3555555543322 356888777775442 3567788999873 3333211235566677788889999999999865
No 161
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=44.80 E-value=1.2e+02 Score=24.37 Aligned_cols=72 Identities=17% Similarity=0.155 Sum_probs=46.0
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCc-hhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPA-QCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~-~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-.+.|.+|+++ |.+|+.+.-.+. ..++..+++...|.+- ..+..| -.|...+.+.+.++.++. ++|+++.-.
T Consensus 17 G~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D-v~d~~~v~~~~~~~~~~~g~id~lv~nA 90 (246)
T 3osu_A 17 GRSIALQLAEE--GYNVAVNYAGSKEKAEAVVEEIKAKGVDS-FAIQAN-VADADEVKAMIKEVVSQFGSLDVLVNNA 90 (246)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTSCE-EEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcE-EEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 34667788875 678876655443 2344445555667653 444433 557888888888887776 689888654
No 162
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=44.73 E-value=1.2e+02 Score=24.41 Aligned_cols=72 Identities=14% Similarity=-0.014 Sum_probs=46.2
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.-.++..++..+++-..|.+ +..+..| -.|...+..++.++.++. +.|+++.-.
T Consensus 20 G~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-v~~~~~~~~~~~~~~~~~g~id~lv~nA 92 (247)
T 2jah_A 20 GEATARALAAE--GAAVAIAARRVEKLRALGDELTAAGAK-VHVLELD-VADRQGVDAAVASTVEALGGLDILVNNA 92 (247)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEECC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 35677788875 678887766554444444455455654 4444433 457778888888777776 689888644
No 163
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=44.63 E-value=1.2e+02 Score=24.20 Aligned_cols=72 Identities=15% Similarity=0.106 Sum_probs=47.3
Q ss_pred HHHHHHHhhhhCCCceEEEEeeC-CchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMG-PAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G-~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.+.+|+++ |.+|+++.-. ++..++..+++...|. ++..+..| -.|...+..++.++.++. ++|+|+.-.
T Consensus 20 G~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~vi~~A 93 (258)
T 3afn_B 20 GLATARLFARA--GAKVGLHGRKAPANIDETIASMRADGG-DAAFFAAD-LATSEACQQLVDEFVAKFGGIDVLINNA 93 (258)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSCCTTHHHHHHHHHHTTC-EEEEEECC-TTSHHHHHHHHHHHHHHHSSCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEECCCchhhHHHHHHHHHhcCC-ceEEEECC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 34667778875 6788887766 4444444555555554 45555533 457888888888777776 699888654
No 164
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=44.58 E-value=80 Score=26.90 Aligned_cols=75 Identities=8% Similarity=-0.018 Sum_probs=49.5
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCC-EEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcce
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGAD-RGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGKQ 118 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD-~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~~ 118 (251)
-..+.|.+|+++ |.+|+++.-..+..++...++.+.|.+ ++..+..| -.|...+..++.++.++. +.|+++.-..
T Consensus 20 IG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-l~~~~~v~~~~~~~~~~~g~id~lv~nAg 96 (319)
T 3ioy_A 20 VGIGLVRQLLNQ--GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLD-VASREGFKMAADEVEARFGPVSILCNNAG 96 (319)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECC-TTCHHHHHHHHHHHHHHTCCEEEEEECCC
T ss_pred HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECC-CCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 445678888875 678887776665555555555555642 45555533 557788888887777776 5788886553
No 165
>2dfa_A Hypothetical UPF0271 protein TTHB195; lactam utilization protein, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} SCOP: c.6.2.5
Probab=44.54 E-value=21 Score=30.43 Aligned_cols=44 Identities=16% Similarity=0.001 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 94 PLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 94 ~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
...+|++++++++..+|+|+|+|-. +..--+.|..+|.+++..+
T Consensus 121 d~~~A~av~~av~~~d~~L~l~~l~------gs~~~~~A~~~Gl~~~~E~ 164 (250)
T 2dfa_A 121 DRETARAIALAVKAFDPGLPLVVLP------GTVYEEEARKAGLRVVLEA 164 (250)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEECT------TSHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHhCCCcEEEecC------ChHHHHHHHHcCCcEEEEE
Confidence 3578999999999999999999842 3477899999999987544
No 166
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=44.46 E-value=1.3e+02 Score=24.64 Aligned_cols=76 Identities=18% Similarity=0.105 Sum_probs=48.6
Q ss_pred HHhHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEc
Q 025565 37 PFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILG 116 (251)
Q Consensus 37 ~~d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G 116 (251)
...+++|-.+.+-. .+.+|.+|.-..+++ ..++.|..+|..- +.++.....+...+-..+.+.+++.+||+|++-
T Consensus 16 Gsnl~all~~~~~~---~~~eI~~Vis~~~~a-~~~~~A~~~gIp~-~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~a 90 (215)
T 3tqr_A 16 GTNLQAIIGAIQKG---LAIEIRAVISNRADA-YGLKRAQQADIPT-HIIPHEEFPSRTDFESTLQKTIDHYDPKLIVLA 90 (215)
T ss_dssp CHHHHHHHHHHHTT---CSEEEEEEEESCTTC-HHHHHHHHTTCCE-EECCGGGSSSHHHHHHHHHHHHHTTCCSEEEES
T ss_pred cHHHHHHHHHHHcC---CCCEEEEEEeCCcch-HHHHHHHHcCCCE-EEeCccccCchhHhHHHHHHHHHhcCCCEEEEc
Confidence 44566665554322 356888777765543 3467788999874 343321122455666778889999999999986
Q ss_pred c
Q 025565 117 K 117 (251)
Q Consensus 117 ~ 117 (251)
.
T Consensus 91 g 91 (215)
T 3tqr_A 91 G 91 (215)
T ss_dssp S
T ss_pred c
Confidence 5
No 167
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=44.44 E-value=68 Score=26.40 Aligned_cols=73 Identities=14% Similarity=0.069 Sum_probs=44.5
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHH-CCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLA-MGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la-~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
--.+.|.+|+++ |.+|+.+.-..+..++..+++.. .|.+ +..+..| -.|...+.+.+.++.++. +.|+++.-.
T Consensus 32 IG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 106 (266)
T 4egf_A 32 IGADIARAFAAA--GARLVLSGRDVSELDAARRALGEQFGTD-VHTVAID-LAEPDAPAELARRAAEAFGGLDVLVNNA 106 (266)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCC-EEEEECC-TTSTTHHHHHHHHHHHHHTSCSEEEEEC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCc-EEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345677888875 67877666554444444444444 4544 4444433 446666677777777766 689887654
No 168
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=43.86 E-value=91 Score=27.17 Aligned_cols=70 Identities=16% Similarity=0.083 Sum_probs=43.9
Q ss_pred hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCC--CEEEEcceeecCCcCcHHHHHHH-HcCCC
Q 025565 68 CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKP--GLIILGKQAIDDDCNQTGQMVAG-LLSWP 138 (251)
Q Consensus 68 ~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~--dlIl~G~~s~d~~~~~v~~~lA~-~Lg~p 138 (251)
..+.++.+..+|+|.+.+.+.-....|..+.+.+..+.+..+. ++.|--+.-.| .+-.++-.+|+ ..|+-
T Consensus 153 ~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd-~GlA~AN~laA~~aGa~ 225 (325)
T 3eeg_A 153 LARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHND-LGLATANSLAALQNGAR 225 (325)
T ss_dssp HHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCT-TSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCC-CCHHHHHHHHHHHhCCC
Confidence 3566788889999987666543457899999888877666541 24444444334 33445555554 45543
No 169
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=43.62 E-value=1.3e+02 Score=24.54 Aligned_cols=73 Identities=14% Similarity=0.156 Sum_probs=46.1
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCch-hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQ-CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~-~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+.+..-... .++..+++...|.+- ..+..| -.|...+.+.+.++.++. +.|+++.-.
T Consensus 30 IG~aia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lvnnA 104 (270)
T 3is3_A 30 IGAAVAVHLGRL--GAKVVVNYANSTKDAEKVVSEIKALGSDA-IAIKAD-IRQVPEIVKLFDQAVAHFGHLDIAVSNS 104 (270)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCE-EEEECC-TTSHHHHHHHHHHHHHHHSCCCEEECCC
T ss_pred HHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcE-EEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345677888875 6777765544332 334445555667554 344433 457888888888888776 689888543
No 170
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=43.56 E-value=79 Score=26.18 Aligned_cols=73 Identities=11% Similarity=0.124 Sum_probs=46.3
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+.+.-.++..++..+++.+.|.+ +..+..| -.|...+.+.+.++.++. +.|+++.-.
T Consensus 38 IG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lv~nA 111 (271)
T 4ibo_A 38 LGRAMAEGLAVA--GARILINGTDPSRVAQTVQEFRNVGHD-AEAVAFD-VTSESEIIEAFARLDEQGIDVDILVNNA 111 (271)
T ss_dssp HHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCC-EEECCCC-TTCHHHHHHHHHHHHHHTCCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcC-CCCHHHHHHHHHHHHHHCCCCCEEEECC
Confidence 345677788875 667765544444444555666666654 4444433 457788888888877776 689888654
No 171
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=43.50 E-value=32 Score=30.39 Aligned_cols=63 Identities=8% Similarity=0.157 Sum_probs=42.8
Q ss_pred CCHHhHHHHHHHHHhhhhCCCceEEEEeeCCc---------------hhHHHHHHHHHCCCCEEEEEeeCC---CCCHHH
Q 025565 35 MNPFCEIALEEALRIKESGLASEVVAVSMGPA---------------QCVDTLRTGLAMGADRGVHVEAAG---QLYPLT 96 (251)
Q Consensus 35 in~~d~~Ale~A~~lae~~~g~~V~al~~G~~---------------~~~~~l~~~la~GaD~vi~v~~~~---~~d~~a 96 (251)
+..=-...|+.|+++++. .|...+++++-+. ..++-++.+-++|+|.++.+.-+. ..+++.
T Consensus 27 vH~GHq~Li~~a~~~a~~-~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~gVD~v~v~~F~~~~a~ls~e~ 105 (338)
T 2x0k_A 27 VHRGHQKLINATVEKARE-VGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFGIDGVLVIDFTRELSGTSPEK 105 (338)
T ss_dssp CCHHHHHHHHHHHHHHHH-HTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHTTCSEEEEECTTTSSSSCCHHH
T ss_pred ccHHHHHHHHHHHHHHHH-cCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhcCCCEEEEccccHHHHhCCHHH
Confidence 455567889999999987 5778888887441 124445666678999999886432 245554
Q ss_pred HH
Q 025565 97 VA 98 (251)
Q Consensus 97 ~a 98 (251)
+.
T Consensus 106 Fi 107 (338)
T 2x0k_A 106 YV 107 (338)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 172
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=43.29 E-value=81 Score=25.93 Aligned_cols=76 Identities=13% Similarity=0.052 Sum_probs=49.6
Q ss_pred CHHhHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEE
Q 025565 36 NPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIIL 115 (251)
Q Consensus 36 n~~d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~ 115 (251)
+...+++|=.+. .+. .+.+|.+|.-.++ ...++.|..+|..-.. ++.....+-..+-..+.+.+++.+||+|++
T Consensus 22 ~gsnl~all~~~--~~~-~~~eI~~Vis~~~--a~~~~~A~~~gIp~~~-~~~~~~~~r~~~d~~~~~~l~~~~~Dlivl 95 (215)
T 3da8_A 22 TGSLLRSLLDAA--VGD-YPARVVAVGVDRE--CRAAEIAAEASVPVFT-VRLADHPSRDAWDVAITAATAAHEPDLVVS 95 (215)
T ss_dssp CCHHHHHHHHHS--STT-CSEEEEEEEESSC--CHHHHHHHHTTCCEEE-CCGGGSSSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred ChHHHHHHHHHH--hcc-CCCeEEEEEeCCc--hHHHHHHHHcCCCEEE-eCcccccchhhhhHHHHHHHHhhCCCEEEE
Confidence 345666665543 222 4568887766664 3567889999987433 332112345566677888999999999998
Q ss_pred cc
Q 025565 116 GK 117 (251)
Q Consensus 116 G~ 117 (251)
-.
T Consensus 96 ag 97 (215)
T 3da8_A 96 AG 97 (215)
T ss_dssp EE
T ss_pred cC
Confidence 55
No 173
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=43.28 E-value=56 Score=28.14 Aligned_cols=61 Identities=15% Similarity=0.141 Sum_probs=41.1
Q ss_pred HCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-----CCCEEEEcceeecCCcCcHHHHHHHHcCCCc
Q 025565 77 AMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-----KPGLIILGKQAIDDDCNQTGQMVAGLLSWPQ 139 (251)
Q Consensus 77 a~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-----~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~ 139 (251)
..|..+.+...++ . ..+-...+..+++++- +.|.|++|.++.|......+.+++.+||++-
T Consensus 38 ~~Gi~~R~~a~~~-e-~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~ 103 (321)
T 3il6_A 38 RTGISERRIVTQE-N-TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATE 103 (321)
T ss_dssp HHSCSEEECCSSC-C-HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTT
T ss_pred hcCceEEEECCCC-C-HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCC
Confidence 3488887766533 2 2233334444555542 4689999988877777788999999999874
No 174
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=43.06 E-value=1.3e+02 Score=24.26 Aligned_cols=63 Identities=14% Similarity=0.104 Sum_probs=42.6
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE 108 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~ 108 (251)
+...++...+|++. +...|+.++.-.. .+...+++..||+..+. ..+++.....+|..+++..
T Consensus 93 ~~~G~~l~~~lr~~-~~~~iI~lt~~~~--~~~~~~a~~~Ga~~yl~----Kp~~~~~L~~~i~~~l~~~ 155 (249)
T 3q9s_A 93 DFDGGDVVQRLRKN-SALPIIVLTARDT--VEEKVRLLGLGADDYLI----KPFHPDELLARVKVQLRQR 155 (249)
T ss_dssp HHHHHHHHHHHHTT-CCCCEEEEESCCS--HHHHHHHHHHTCSEEEE----SSCCHHHHHHHHHHHHCCC
T ss_pred CCCHHHHHHHHHcC-CCCCEEEEECCCC--HHHHHHHHHCCCcEEEE----CCCCHHHHHHHHHHHHhhc
Confidence 45567777777764 5667776665543 46678888999997554 2457777777777776643
No 175
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=42.95 E-value=58 Score=25.99 Aligned_cols=72 Identities=7% Similarity=-0.035 Sum_probs=44.6
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHH-HCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGL-AMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~l-a~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+.+.-..+..++..+++. ..|. ++..+..| -.|...+..++.++.++. ++|+++...
T Consensus 15 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~li~~A 88 (235)
T 3l77_A 15 GEAIARALARD--GYALALGARSVDRLEKIAHELMQEQGV-EVFYHHLD-VSKAESVEEFSKKVLERFGDVDVVVANA 88 (235)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECC-TTCHHHHHHHCC-HHHHHSSCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCC-eEEEEEec-cCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 45677888875 6677766655444444444443 3454 45555433 457777777777777766 689888654
No 176
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=42.72 E-value=87 Score=22.15 Aligned_cols=63 Identities=10% Similarity=0.095 Sum_probs=41.3
Q ss_pred hHHHHHHHHHhhh--hCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHH
Q 025565 39 CEIALEEALRIKE--SGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEV 107 (251)
Q Consensus 39 d~~Ale~A~~lae--~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~ 107 (251)
+...++...+|++ ......|+.++--.. .+...+++..|++..+. . .++.......|..+++.
T Consensus 63 ~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~--~~~~~~~~~~g~~~~l~-K---P~~~~~l~~~i~~~~~~ 127 (140)
T 3lua_A 63 EKEGLEVLSAIRNNSRTANTPVIIATKSDN--PGYRHAALKFKVSDYIL-K---PYPTKRLENSVRSVLKI 127 (140)
T ss_dssp HHHHHHHHHHHHHSGGGTTCCEEEEESCCC--HHHHHHHHHSCCSEEEE-S---SCCTTHHHHHHHHHHCC
T ss_pred CCcHHHHHHHHHhCcccCCCCEEEEeCCCC--HHHHHHHHHcCCCEEEE-C---CCCHHHHHHHHHHHHHh
Confidence 4456777777777 435566766664432 46778899999997544 2 34566667777776654
No 177
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=42.70 E-value=87 Score=22.14 Aligned_cols=63 Identities=6% Similarity=0.110 Sum_probs=43.7
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE 108 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~ 108 (251)
...++...+|++..+...++.++-... .+...+++..|++..+. ..++...+...|.++.+..
T Consensus 65 ~~g~~~~~~l~~~~~~~~ii~~s~~~~--~~~~~~~~~~ga~~~l~----KP~~~~~l~~~i~~~~~~~ 127 (136)
T 3kto_A 65 DSGIELLETLVKRGFHLPTIVMASSSD--IPTAVRAMRASAADFIE----KPFIEHVLVHDVQQIINGA 127 (136)
T ss_dssp THHHHHHHHHHHTTCCCCEEEEESSCC--HHHHHHHHHTTCSEEEE----SSBCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhCCCCCCEEEEEcCCC--HHHHHHHHHcChHHhee----CCCCHHHHHHHHHHHHhcc
Confidence 566777888887644556666554432 45678899999997544 2467888888888877764
No 178
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=42.64 E-value=22 Score=30.99 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 98 AKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 98 a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
...+.+++++.+||+|++... .-.+..+|.++|+|++...
T Consensus 119 ~~~l~~~l~~~~pDlVv~d~~------~~~~~~aA~~~giP~v~~~ 158 (398)
T 3oti_A 119 VDGTMALVDDYRPDLVVYEQG------ATVGLLAADRAGVPAVQRN 158 (398)
T ss_dssp HHHHHHHHHHHCCSEEEEETT------CHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECch------hhHHHHHHHHcCCCEEEEe
Confidence 345677788889999997321 2347788899999988654
No 179
>3qel_B Glutamate [NMDA] receptor subunit epsilon-2; ION channel, allosteric modulation, phenylethanolamine, N-glycosylation, extracellular; HET: NAG BMA MAN FUC QEL; 2.60A {Rattus norvegicus} PDB: 3qem_B* 3jpw_A* 3jpy_A*
Probab=42.53 E-value=36 Score=29.79 Aligned_cols=86 Identities=7% Similarity=0.039 Sum_probs=47.8
Q ss_pred eEEEEeeCCchhHHHHHHHHHCCC----C-EEEEEee-CCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHH
Q 025565 57 EVVAVSMGPAQCVDTLRTGLAMGA----D-RGVHVEA-AGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQM 130 (251)
Q Consensus 57 ~V~al~~G~~~~~~~l~~~la~Ga----D-~vi~v~~-~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~ 130 (251)
.|-++.-|... +.++|.++...- . ++..+.. ....|+...+..+++.+...+.-.|+.|.++......++-..
T Consensus 6 ~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~~~C~~l~~~~V~aiIgg~~s~~~a~a~~v~~ 84 (364)
T 3qel_B 6 GIAVILVGTSD-EVAIKDAHEKDDFHHLSVVPRVELVAMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDF 84 (364)
T ss_dssp EEEEEEESSCC-HHHHTC---------CCSEEEEEEEEECCCSHHHHHHHHHHHHHHSCEEEEEEEESSCCTHHHHHHHH
T ss_pred EEEEEEcccch-hhhhccccCccccccCCccceEEEEEecCCCHHHHHHHHHHHHHhCCeEEEEecCCCCchHHHHHHHH
Confidence 34444446654 566666654321 1 2322221 124689998888888887555666666665422111233567
Q ss_pred HHHHcCCCcccce
Q 025565 131 VAGLLSWPQGTFA 143 (251)
Q Consensus 131 lA~~Lg~p~vt~v 143 (251)
++..+++|+++.-
T Consensus 85 i~~~~~iP~IS~~ 97 (364)
T 3qel_B 85 ISAQTLTPILGIH 97 (364)
T ss_dssp HHHHHTCCEEEEE
T ss_pred HHhccCCCEEEee
Confidence 8899999999865
No 180
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=42.48 E-value=17 Score=31.68 Aligned_cols=67 Identities=13% Similarity=0.024 Sum_probs=45.0
Q ss_pred HHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCC-CCCHHHHHHHHHHHHHHh-CCCE
Q 025565 45 EALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG-QLYPLTVAKILKSLVEVE-KPGL 112 (251)
Q Consensus 45 ~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~-~~d~~a~a~~La~~ik~~-~~dl 112 (251)
.-.++++. ....|+++.=|+-..-+.++.++.+|+|-+.+-+.-- ..||...++.+.++++.+ +|++
T Consensus 189 lI~~Ike~-~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~Akafv~Av~~~~~~~~ 257 (291)
T 3o07_A 189 LLKDVLEK-GKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLATAVVEATTHFDNPSK 257 (291)
T ss_dssp HHHHHHHH-TSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHc-cCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHHHHHHHHHHhccCHHH
Confidence 34455665 4445555555664334567778899999988866321 458999999999999875 4543
No 181
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=42.34 E-value=1.3e+02 Score=24.21 Aligned_cols=71 Identities=14% Similarity=0.020 Sum_probs=46.0
Q ss_pred HHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 43 LEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
.+.|.+|+++ |.+|+++.-.++..++..+++...|.. +..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 16 ~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lv~nA 87 (256)
T 1geg_A 16 KAIALRLVKD--GFAVAIADYNDATAKAVASEINQAGGH-AVAVKVD-VSDRDQVFAAVEQARKTLGGFDVIVNNA 87 (256)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTSHHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEec-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 4667788875 678887766554444444555555643 4444433 457778888888877776 689888644
No 182
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=42.29 E-value=1.4e+02 Score=24.34 Aligned_cols=72 Identities=14% Similarity=0.191 Sum_probs=44.7
Q ss_pred HHHHHHHhhhhCCCceEEEE-eeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAV-SMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al-~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-.+.|++|+++ |.+|+.+ .-..+..++..+++...|.+ +..+..| -.|...+...+.++.++. ++|+++.-.
T Consensus 17 G~aia~~l~~~--G~~vv~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 90 (258)
T 3oid_A 17 GKAAAIRLAEN--GYNIVINYARSKKAALETAEEIEKLGVK-VLVVKAN-VGQPAKIKEMFQQIDETFGRLDVFVNNA 90 (258)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCc-EEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 34667788875 6677654 23322333444555555654 4444433 557888888888887776 689888654
No 183
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=41.91 E-value=37 Score=29.61 Aligned_cols=31 Identities=23% Similarity=0.216 Sum_probs=16.8
Q ss_pred CCceEEEEeeCCchh-HHHHHHHHHCCCCEEEEEe
Q 025565 54 LASEVVAVSMGPAQC-VDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 54 ~g~~V~al~~G~~~~-~~~l~~~la~GaD~vi~v~ 87 (251)
.|..|. ..|.... .-+++-|.++|+ +++.+.
T Consensus 189 ~g~~Vl--V~G~G~vG~~a~qla~~~Ga-~Vi~~~ 220 (363)
T 3uog_A 189 AGDRVV--VQGTGGVALFGLQIAKATGA-EVIVTS 220 (363)
T ss_dssp TTCEEE--EESSBHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCEEE--EECCCHHHHHHHHHHHHcCC-EEEEEe
Confidence 454444 3443222 334566667888 677665
No 184
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=41.75 E-value=35 Score=24.52 Aligned_cols=46 Identities=11% Similarity=0.008 Sum_probs=30.7
Q ss_pred CHHHHHHHHHHHHHHhCCCEEEEc-----ceeecC---CcCcHHHHHHHHcCCCc
Q 025565 93 YPLTVAKILKSLVEVEKPGLIILG-----KQAIDD---DCNQTGQMVAGLLSWPQ 139 (251)
Q Consensus 93 d~~a~a~~La~~ik~~~~dlIl~G-----~~s~d~---~~~~v~~~lA~~Lg~p~ 139 (251)
+.......|.+++++++++.|++| +.+.+. .....+-+|+.+ ++|+
T Consensus 35 ~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~-~lpV 88 (98)
T 1iv0_A 35 TLEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRAR-GVEV 88 (98)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHT-TCEE
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcC-CCCE
Confidence 455667899999999999999999 322221 112346677766 6553
No 185
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=41.74 E-value=73 Score=25.94 Aligned_cols=73 Identities=15% Similarity=0.069 Sum_probs=45.4
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchh-HHHHHHHHH-CCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcce
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQC-VDTLRTGLA-MGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGKQ 118 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~-~~~l~~~la-~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~~ 118 (251)
..+.|++|++. |.+|+.+.-..... ++.++++.. +|. ++..+..| -.|...+.+.+.++.++. +.|+++....
T Consensus 35 G~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~D-l~~~~~v~~~~~~~~~~~g~id~li~nAg 110 (267)
T 3gdg_A 35 GIEAARGCAEM--GAAVAITYASRAQGAEENVKELEKTYGI-KAKAYKCQ-VDSYESCEKLVKDVVADFGQIDAFIANAG 110 (267)
T ss_dssp HHHHHHHHHHT--SCEEEECBSSSSSHHHHHHHHHHHHHCC-CEECCBCC-TTCHHHHHHHHHHHHHHTSCCSEEEECCC
T ss_pred HHHHHHHHHHC--CCeEEEEeCCcchhHHHHHHHHHHhcCC-ceeEEecC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 45677788875 66777666555433 445555443 343 45444433 457777778887777776 6898886553
No 186
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=41.67 E-value=1.5e+02 Score=24.46 Aligned_cols=85 Identities=11% Similarity=-0.003 Sum_probs=51.0
Q ss_pred ceEEEEeeCCchhHHHHHH-HHHCCCCEEEEEeeCC--------CCCHHHHHHHHHHHH-HHhCCCEEEEcceeecCCcC
Q 025565 56 SEVVAVSMGPAQCVDTLRT-GLAMGADRGVHVEAAG--------QLYPLTVAKILKSLV-EVEKPGLIILGKQAIDDDCN 125 (251)
Q Consensus 56 ~~V~al~~G~~~~~~~l~~-~la~GaD~vi~v~~~~--------~~d~~a~a~~La~~i-k~~~~dlIl~G~~s~d~~~~ 125 (251)
.+|-.++--.....+..++ +-+.|.+ ++...... ..++..+...+.+++ ...+.|.|++|+|..- +-
T Consensus 118 ~rvglltpy~~~~~~~~~~~l~~~Gie-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~adaivL~CT~l~--~l 194 (240)
T 3ixl_A 118 RRVALATAYIDDVNERLAAFLAEESLV-PTGCRSLGITGVEAMARVDTATLVDLCVRAFEAAPDSDGILLSSGGLL--TL 194 (240)
T ss_dssp SEEEEEESSCHHHHHHHHHHHHHTTCE-EEEEEECCCCCHHHHHTCCHHHHHHHHHHHHHTSTTCSEEEEECTTSC--CT
T ss_pred CEEEEEeCChHHHHHHHHHHHHHCCCE-EeccccCCCCCcchhhcCCHHHHHHHHHHHhhcCCCCCEEEEeCCCCc--hh
Confidence 4666554332222334444 4458986 44444322 235666666666634 5558999999987543 22
Q ss_pred cHHHHHHHHcCCCcccce
Q 025565 126 QTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 126 ~v~~~lA~~Lg~p~vt~v 143 (251)
.+...+-..+|.|+++..
T Consensus 195 ~~i~~le~~lg~PVids~ 212 (240)
T 3ixl_A 195 DAIPEVERRLGVPVVSSS 212 (240)
T ss_dssp THHHHHHHHHSSCEEEHH
T ss_pred hhHHHHHHHhCCCEEeHH
Confidence 356788999999997654
No 187
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=41.55 E-value=97 Score=22.33 Aligned_cols=61 Identities=20% Similarity=0.178 Sum_probs=40.5
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHH
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEV 107 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~ 107 (251)
..++...+|++..++..+++++-... .+...+++..|++..+. ..++......+|..+++.
T Consensus 80 ~g~~~~~~l~~~~~~~~ii~ls~~~~--~~~~~~~~~~g~~~~l~----Kp~~~~~l~~~i~~~~~~ 140 (150)
T 4e7p_A 80 TGLEVLEWIRSEKLETKVVVVTTFKR--AGYFERAVKAGVDAYVL----KERSIADLMQTLHTVLEG 140 (150)
T ss_dssp CHHHHHHHHHHTTCSCEEEEEESCCC--HHHHHHHHHTTCSEEEE----TTSCHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHhCCCCeEEEEeCCCC--HHHHHHHHHCCCcEEEe----cCCCHHHHHHHHHHHHcC
Confidence 34666667776545556665554432 56778899999996554 245777777888777764
No 188
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=41.49 E-value=1.5e+02 Score=24.47 Aligned_cols=73 Identities=14% Similarity=0.119 Sum_probs=45.4
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCC-chhHHHHHHHH-HCCCCEEEEEeeCCCCC----HHHHHHHHHHHHHHh-CCCEE
Q 025565 41 IALEEALRIKESGLASEVVAVSMGP-AQCVDTLRTGL-AMGADRGVHVEAAGQLY----PLTVAKILKSLVEVE-KPGLI 113 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~-~~~~~~l~~~l-a~GaD~vi~v~~~~~~d----~~a~a~~La~~ik~~-~~dlI 113 (251)
-..+.|.+|++. |.+|+++.-.+ +..++..+++- ..|. ++..+..| -.| ...+..++.++.++. +.|++
T Consensus 35 IG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~-~~~~~~~D-v~~~~~~~~~v~~~~~~~~~~~g~iD~l 110 (288)
T 2x9g_A 35 IGRAIAVKLHQT--GYRVVIHYHNSAEAAVSLADELNKERSN-TAVVCQAD-LTNSNVLPASCEEIINSCFRAFGRCDVL 110 (288)
T ss_dssp HHHHHHHHHHHH--TCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECC-CSCSTTHHHHHHHHHHHHHHHHSCCCEE
T ss_pred HHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhhcCC-ceEEEEee-cCCccCCHHHHHHHHHHHHHhcCCCCEE
Confidence 345677888886 67888777665 43333334433 4564 45555433 345 777777777777766 68988
Q ss_pred EEcc
Q 025565 114 ILGK 117 (251)
Q Consensus 114 l~G~ 117 (251)
+.-.
T Consensus 111 vnnA 114 (288)
T 2x9g_A 111 VNNA 114 (288)
T ss_dssp EECC
T ss_pred EECC
Confidence 8654
No 189
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=41.39 E-value=1.5e+02 Score=24.83 Aligned_cols=72 Identities=6% Similarity=-0.016 Sum_probs=44.4
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.-.++..++..+++...|.. +..+..| -.|...+..++.++.++. +.|+++.-.
T Consensus 47 G~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 119 (291)
T 3cxt_A 47 GFAIASAYAKA--GATIVFNDINQELVDRGMAAYKAAGIN-AHGYVCD-VTDEDGIQAMVAQIESEVGIIDILVNNA 119 (291)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCC-CEEEECC-TTCHHHHHHHHHHHHHHTCCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEEec-CCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 45677778875 668777665544334444444455643 3333323 457777778887777776 589888644
No 190
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=41.27 E-value=63 Score=28.32 Aligned_cols=17 Identities=12% Similarity=0.261 Sum_probs=11.3
Q ss_pred HHHHHHHCCCCEEEEEe
Q 025565 71 TLRTGLAMGADRGVHVE 87 (251)
Q Consensus 71 ~l~~~la~GaD~vi~v~ 87 (251)
+++-|.++|+.+++.+.
T Consensus 211 aiqlak~~Ga~~Vi~~~ 227 (380)
T 1vj0_A 211 GVVIARSLGAENVIVIA 227 (380)
T ss_dssp HHHHHHHTTBSEEEEEE
T ss_pred HHHHHHHcCCceEEEEc
Confidence 45556677876777665
No 191
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=41.26 E-value=1.4e+02 Score=24.60 Aligned_cols=73 Identities=18% Similarity=0.159 Sum_probs=44.2
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCch-hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQ-CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~-~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
--.+.|++|+++ |.+|+.+.-.... .++..+++...|.. +..+..| -.|...+.+.+.++.++. +.|+++.-.
T Consensus 39 IG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-l~~~~~v~~~~~~~~~~~g~iD~lvnnA 113 (267)
T 3u5t_A 39 IGAAIAARLASD--GFTVVINYAGKAAAAEEVAGKIEAAGGK-ALTAQAD-VSDPAAVRRLFATAEEAFGGVDVLVNNA 113 (267)
T ss_dssp HHHHHHHHHHHH--TCEEEEEESSCSHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCe-EEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345677788876 6677655443332 23334444556654 4444433 457778888888777776 588887654
No 192
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=41.10 E-value=30 Score=28.97 Aligned_cols=58 Identities=17% Similarity=0.161 Sum_probs=37.0
Q ss_pred CCCEEEEEeeCC-CCCHH---HHHHHHHHHHHHh--CCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 79 GADRGVHVEAAG-QLYPL---TVAKILKSLVEVE--KPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 79 GaD~vi~v~~~~-~~d~~---a~a~~La~~ik~~--~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
|-..=|.++... ..+|. ..++.+|+.+++. ++|+|++... .+--++..+|..||.|++
T Consensus 52 G~~Sp~Y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~----gGi~~a~~lA~~L~~p~~ 115 (234)
T 3m3h_A 52 GMKSPIYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTAT----AGIAHAAWVSDRMDLPMC 115 (234)
T ss_dssp SCEESEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEC-------CHHHHHHHHHHHTCCEE
T ss_pred CCcCCEEEeCHHhccCHHHHHHHHHHHHHHHHHhCCCCCEEEEecc----chHHHHHHHHHHcCCCEE
Confidence 444445554322 12443 5677788888776 7898877653 334688999999999974
No 193
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=40.97 E-value=42 Score=29.77 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=18.3
Q ss_pred CCceEEEEeeCCchh-HHHHHHHHHCCCCEEEEEe
Q 025565 54 LASEVVAVSMGPAQC-VDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 54 ~g~~V~al~~G~~~~-~~~l~~~la~GaD~vi~v~ 87 (251)
.|.+|.+. |.... .-+++-|.++|+.+++.++
T Consensus 213 ~g~~VlV~--GaG~vG~~aiqlak~~Ga~~Vi~~~ 245 (404)
T 3ip1_A 213 PGDNVVIL--GGGPIGLAAVAILKHAGASKVILSE 245 (404)
T ss_dssp TTCEEEEE--CCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEE--CCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 45455443 43222 2345556678998888875
No 194
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=40.48 E-value=1.4e+02 Score=23.89 Aligned_cols=84 Identities=13% Similarity=0.005 Sum_probs=49.3
Q ss_pred ceEEEEeeCCchhHHHHHH-HHHCCCCEEEEEeeCCC--------CCHHHHHHHHHHHHHHh--CCCEEEEcceeecCCc
Q 025565 56 SEVVAVSMGPAQCVDTLRT-GLAMGADRGVHVEAAGQ--------LYPLTVAKILKSLVEVE--KPGLIILGKQAIDDDC 124 (251)
Q Consensus 56 ~~V~al~~G~~~~~~~l~~-~la~GaD~vi~v~~~~~--------~d~~a~a~~La~~ik~~--~~dlIl~G~~s~d~~~ 124 (251)
.+|-.++--.....+..++ +-++|.+ ++....... .+...+.+++.++ .+. +.|.|++|+|-...
T Consensus 109 ~rvgvlt~~~~~~~~~~~~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~gadaIvLgCT~l~~-- 184 (223)
T 2dgd_A 109 RKLWIGTPYIKERTLEEVEWWRNKGFE-IVGYDGLGKIRGIDISNTPIFTIYRLVKRH-LNEVLKADAVYIACTALST-- 184 (223)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHTTTCE-EEEEEECCCCSHHHHHTCCHHHHHHHHHTT-HHHHTTSSEEEECCTTSCC--
T ss_pred CeEEEEeCCchHHHHHHHHHHHhCCcE-EecccCCCCCCcchhhccCHHHHHHHHHHH-hcccCCCCEEEEeCCcccH--
Confidence 4666665444332334544 4458977 444433221 3455555555554 445 89999999875332
Q ss_pred CcHHHHHHHHcCCCcccce
Q 025565 125 NQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 125 ~~v~~~lA~~Lg~p~vt~v 143 (251)
-.+...+...+|.|+++..
T Consensus 185 ~~~~~~l~~~~g~PVids~ 203 (223)
T 2dgd_A 185 YEAVQYLHEDLDMPVVSEN 203 (223)
T ss_dssp TTHHHHHHHHHTSCEEEHH
T ss_pred HHHHHHHHHHhCCCEEEhH
Confidence 2356777888999987543
No 195
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=40.33 E-value=1.5e+02 Score=24.09 Aligned_cols=72 Identities=15% Similarity=0.121 Sum_probs=46.0
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+.+.-.++..++..+++...|.. +..+..| -.|...+...+.++.++. +.|+++.-.
T Consensus 20 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~lv~nA 92 (262)
T 1zem_A 20 GLATALRLAEE--GTAIALLDMNREALEKAEASVREKGVE-ARSYVCD-VTSEEAVIGTVDSVVRDFGKIDFLFNNA 92 (262)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTSC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEec-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 45677888885 678877765544334444444445654 4444433 457778888888877776 689888744
No 196
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=40.26 E-value=1.3e+02 Score=24.99 Aligned_cols=74 Identities=14% Similarity=0.115 Sum_probs=45.9
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCc-hhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPA-QCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~-~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
--..+.|.+|+++ |.+|+++..... ..++..+++...|.. +..+..| -.|...+.+++.++.++. +.|+++.-.
T Consensus 40 GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 115 (280)
T 4da9_A 40 GIGLGIARALAAS--GFDIAITGIGDAEGVAPVIAELSGLGAR-VIFLRAD-LADLSSHQATVDAVVAEFGRIDCLVNNA 115 (280)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEESCCHHHHHHHHHHHHHTTCC-EEEEECC-TTSGGGHHHHHHHHHHHHSCCCEEEEEC
T ss_pred HHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCCc-EEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3445677888875 678877665333 234444555566654 4444433 456667777777777776 689888654
No 197
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=39.92 E-value=1.9e+02 Score=28.26 Aligned_cols=90 Identities=17% Similarity=0.089 Sum_probs=53.7
Q ss_pred HHHHHHHhhhhCCCceEE-EEeeC----C--------chhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh
Q 025565 42 ALEEALRIKESGLASEVV-AVSMG----P--------AQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE 108 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~-al~~G----~--------~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~ 108 (251)
-+..+.+.+.+ .|..|. ++++. + +...+.++.+..+|||.+.+.+.-....|..+...+..+.+..
T Consensus 225 ~l~~~i~~ak~-~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~ 303 (718)
T 3bg3_A 225 NMLLGMEAAGS-AGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRF 303 (718)
T ss_dssp HHHHHHHHHHT-TTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHH-cCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhC
Confidence 45555554444 455554 35554 1 1235567888899999888776444578999888888777766
Q ss_pred CCCEEEEcceeecCCcCcHHHHHHHH
Q 025565 109 KPGLIILGKQAIDDDCNQTGQMVAGL 134 (251)
Q Consensus 109 ~~dlIl~G~~s~d~~~~~v~~~lA~~ 134 (251)
|++.|-=++-.| .+-.++-.+|+.
T Consensus 304 -p~~~I~~H~Hnd-~GlAvANslaAv 327 (718)
T 3bg3_A 304 -PDLPLHIHTHDT-SGAGVAAMLACA 327 (718)
T ss_dssp -TTCCEEEECCCT-TSCHHHHHHHHH
T ss_pred -CCCeEEEEECCC-ccHHHHHHHHHH
Confidence 244433333323 444566665554
No 198
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=39.77 E-value=67 Score=27.83 Aligned_cols=61 Identities=16% Similarity=0.061 Sum_probs=41.7
Q ss_pred HCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-----CCCEEEEcceeecCCcCcHHHHHHHHcCCC
Q 025565 77 AMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-----KPGLIILGKQAIDDDCNQTGQMVAGLLSWP 138 (251)
Q Consensus 77 a~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-----~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p 138 (251)
..|..+-++...+ ....+-.+.+..+++++- +.|.|++|.++.|......+.+++.+||++
T Consensus 53 ~tGi~~R~~~~~~-~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~ 118 (345)
T 3s21_A 53 VAGIHARRLWDQD-VQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVS 118 (345)
T ss_dssp TTCCSEEEECSSC-CCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCC
T ss_pred hhCceeEEECCCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCC
Confidence 5688888876532 222233334444555542 468999999887776678899999999986
No 199
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=39.76 E-value=32 Score=30.55 Aligned_cols=37 Identities=16% Similarity=0.265 Sum_probs=26.9
Q ss_pred HHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 101 LKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 101 La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
+.+++++.+||+|++.... ..+..+|.++|+|++...
T Consensus 136 l~~~~~~~~pDlVv~d~~~------~~~~~aA~~lgiP~v~~~ 172 (441)
T 2yjn_A 136 MVSFCRKWRPDLVIWEPLT------FAAPIAAAVTGTPHARLL 172 (441)
T ss_dssp HHHHHHHHCCSEEEECTTC------THHHHHHHHHTCCEEEEC
T ss_pred HHHHHHhcCCCEEEecCcc------hhHHHHHHHcCCCEEEEe
Confidence 4445566799999975421 367888999999987653
No 200
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=39.56 E-value=1.5e+02 Score=23.81 Aligned_cols=72 Identities=15% Similarity=0.211 Sum_probs=44.4
Q ss_pred HHHHHHHhhhhCCCceEEEEee-CCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSM-GPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~-G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-.+.|.+|+++ |.+|+++.- .++..++..+++-..|.+ +..+..| -.|...+...+.++.++. ++|+++.-.
T Consensus 17 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~lv~nA 90 (246)
T 2uvd_A 17 GRAIAIDLAKQ--GANVVVNYAGNEQKANEVVDEIKKLGSD-AIAVRAD-VANAEDVTNMVKQTVDVFGQVDILVNNA 90 (246)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCc-EEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 34667788875 678877665 333233334444445654 4444433 457788888887777776 689888644
No 201
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=39.31 E-value=1.1e+02 Score=26.27 Aligned_cols=61 Identities=16% Similarity=0.129 Sum_probs=40.5
Q ss_pred HCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-----CCCEEEEcceeecCCcCcHHHHHHHHcCCC
Q 025565 77 AMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-----KPGLIILGKQAIDDDCNQTGQMVAGLLSWP 138 (251)
Q Consensus 77 a~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-----~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p 138 (251)
..|..+......+ ....+--+.+..+++++- +.|.|++|.++.+......+.+++.+||++
T Consensus 43 ~tGi~~R~~a~~~-~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~ 108 (323)
T 3il3_A 43 RSGIRERRIAAED-ETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNID 108 (323)
T ss_dssp HTCCCEEECCCTT-CCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCS
T ss_pred hcCCcEEEECCCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCC
Confidence 4688877665422 222233344444555543 468999998887766667899999999986
No 202
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=39.26 E-value=1.5e+02 Score=23.94 Aligned_cols=72 Identities=10% Similarity=0.081 Sum_probs=44.6
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHH-h-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEV-E-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~-~-~~dlIl~G~ 117 (251)
-.+.|.+|+++ |.+|+++.-.++..++..+++...|. ++..+..| -.|...+...+.++.++ . ..|+++.-.
T Consensus 18 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~~g~id~lvnnA 91 (260)
T 2qq5_A 18 GRGIALQLCKA--GATVYITGRHLDTLRVVAQEAQSLGG-QCVPVVCD-SSQESEVRSLFEQVDREQQGRLDVLVNNA 91 (260)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSS-EEEEEECC-TTSHHHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEECC-CCCHHHHHHHHHHHHHhcCCCceEEEECC
Confidence 35677788875 67887766554433444444444453 55555533 45777777777777665 3 689888654
No 203
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=39.11 E-value=1.4e+02 Score=23.54 Aligned_cols=72 Identities=13% Similarity=0.067 Sum_probs=42.7
Q ss_pred HHHHHHhhhhCCCceEEEE-eeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 43 LEEALRIKESGLASEVVAV-SMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al-~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
.+.|.+|+++ |.+|+++ .-.++..++..+++-..|..-.+.+..| -.|......++.++.++. ++|+|+.-.
T Consensus 15 ~~~a~~l~~~--G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~~~~d~li~~A 88 (245)
T 2ph3_A 15 RAIALRLAED--GFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGAN-LLEAEAATALVHQAAEVLGGLDTLVNNA 88 (245)
T ss_dssp HHHHHHHHTT--TCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECC-TTSHHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred HHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEecc-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 4567778875 6677766 3333333333444445565533324433 457777777777777665 689888654
No 204
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=39.03 E-value=1.4e+02 Score=26.08 Aligned_cols=61 Identities=16% Similarity=0.218 Sum_probs=42.1
Q ss_pred HCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-----CCCEEEEcceeecCCcCcHHHHHHHHcCCC
Q 025565 77 AMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-----KPGLIILGKQAIDDDCNQTGQMVAGLLSWP 138 (251)
Q Consensus 77 a~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-----~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p 138 (251)
..|..+-.....+ ....+-.+.++.+++++- +.|.|++|.++.+.....++.+++.+||++
T Consensus 59 ~tGi~~R~~a~~~-~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~ 124 (359)
T 3h78_A 59 RTGVRTRYHVEPE-QAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLR 124 (359)
T ss_dssp HHCCCEEEECCTT-CCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCC
T ss_pred hcCceEEEEcCCC-CCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCC
Confidence 3488887766532 233444455555666543 468999998887666667899999999997
No 205
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=38.84 E-value=1.6e+02 Score=24.08 Aligned_cols=73 Identities=12% Similarity=0.068 Sum_probs=46.0
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh--CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE--KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~--~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+++.-.++..++..+++...|.+ +..+..| -.|...+..++.++.++. +.|+++.-.
T Consensus 33 IG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~~g~id~lv~nA 107 (273)
T 1ae1_A 33 IGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLN-VEGSVCD-LLSRTERDKLMQTVAHVFDGKLNILVNNA 107 (273)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHTTSCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEECC-CCCHHHHHHHHHHHHHHcCCCCcEEEECC
Confidence 345677788875 678877665544334444455455654 4444433 457788888888777775 589888655
No 206
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=38.80 E-value=31 Score=29.89 Aligned_cols=39 Identities=18% Similarity=0.202 Sum_probs=28.2
Q ss_pred HHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 99 KILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 99 ~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
..+.+.+++.+||+|++-.. .-.+..+|.++|+|++...
T Consensus 120 ~~l~~~l~~~~pDvVv~~~~------~~~~~~aa~~~giP~v~~~ 158 (412)
T 3otg_A 120 DELQPVIERLRPDLVVQEIS------NYGAGLAALKAGIPTICHG 158 (412)
T ss_dssp HHHHHHHHHHCCSEEEEETT------CHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHhcCCCEEEECch------hhHHHHHHHHcCCCEEEec
Confidence 56777888889999987421 1236677889999987644
No 207
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=38.64 E-value=1.6e+02 Score=24.02 Aligned_cols=74 Identities=15% Similarity=0.228 Sum_probs=46.4
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeC------------CchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh
Q 025565 41 IALEEALRIKESGLASEVVAVSMG------------PAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE 108 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G------------~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~ 108 (251)
-..+.|.+|+++ |.+|+++... .+..++..+.+-..|. ++..+..| -.|...+.+.+.++.++.
T Consensus 25 IG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~ 100 (278)
T 3sx2_A 25 QGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQAD-VRDRESLSAALQAGLDEL 100 (278)
T ss_dssp HHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECC-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCC-CCCHHHHHHHHHHHHHHc
Confidence 345677888875 6788776544 2223333444445564 45555433 557888888888887776
Q ss_pred -CCCEEEEcce
Q 025565 109 -KPGLIILGKQ 118 (251)
Q Consensus 109 -~~dlIl~G~~ 118 (251)
+.|+++.-..
T Consensus 101 g~id~lv~nAg 111 (278)
T 3sx2_A 101 GRLDIVVANAG 111 (278)
T ss_dssp CCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 6898887553
No 208
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=38.58 E-value=28 Score=30.66 Aligned_cols=50 Identities=22% Similarity=0.145 Sum_probs=31.5
Q ss_pred hHHHHHHHHHCCCCEEEEEeeCC-CCCH-----HHHHHHHHHHHHHhCCCEEEEccee
Q 025565 68 CVDTLRTGLAMGADRGVHVEAAG-QLYP-----LTVAKILKSLVEVEKPGLIILGKQA 119 (251)
Q Consensus 68 ~~~~l~~~la~GaD~vi~v~~~~-~~d~-----~a~a~~La~~ik~~~~dlIl~G~~s 119 (251)
+.+.++++-+.|+|-+|++.+-. ..|. +-.+..||+.+ -+.|+||.|++-
T Consensus 196 ~~~~v~~Lk~~g~D~II~l~H~G~~~d~~~~~~e~~~~~lA~~v--~giD~IigGHsH 251 (341)
T 3gve_A 196 ANETIPKMKAEGADVIIALAHTGIEKQAQSSGAENAVFDLATKT--KGIDAIISGHQH 251 (341)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCCCCSSCCCTTCSSCHHHHHHHC--SCCCEEEECSSC
T ss_pred HHHHHHHHHhcCCCEEEEEeccCccccccccccchhHHHHHhcC--CCCcEEEECCCC
Confidence 44556667778999999998643 1221 11123455443 379999999964
No 209
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=38.53 E-value=1.6e+02 Score=23.93 Aligned_cols=73 Identities=11% Similarity=0.029 Sum_probs=45.7
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHC--CCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAM--GADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~--GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+++.-.++..++..+++... |. ++..+..| -.|...+.+++.++.++. +.|+++.-.
T Consensus 25 IG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lv~nA 100 (267)
T 1iy8_A 25 LGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDA-EVLTTVAD-VSDEAQVEAYVTATTERFGRIDGFFNNA 100 (267)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTC-CEEEEECC-TTSHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCc-eEEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345677888875 678887766554333334444333 44 34444433 457778888888777776 689888654
No 210
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=38.52 E-value=1.5e+02 Score=23.67 Aligned_cols=73 Identities=16% Similarity=0.185 Sum_probs=45.7
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+++.-.+...++..+++...|.+ +..+..| -.|...+..++.++.++. ++|+|+.-.
T Consensus 25 iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~~~id~vi~~A 98 (260)
T 3awd_A 25 IGLACVTALAEA--GARVIIADLDEAMATKAVEDLRMEGHD-VSSVVMD-VTNTESVQNAVRSVHEQEGRVDILVACA 98 (260)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345677788875 678887766544334444455455644 4444433 457777777777777766 689888644
No 211
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=38.49 E-value=1.6e+02 Score=24.06 Aligned_cols=73 Identities=16% Similarity=0.175 Sum_probs=45.9
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeC-------------CchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHH
Q 025565 41 IALEEALRIKESGLASEVVAVSMG-------------PAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEV 107 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G-------------~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~ 107 (251)
--.+.|++|+++ |.+|+++... .+..++..+..-..|.. +..+..| -.|...+.+.+.++.++
T Consensus 23 IG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~v~~~~~~~~~~ 98 (277)
T 3tsc_A 23 QGRAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRR-IVAAVVD-TRDFDRLRKVVDDGVAA 98 (277)
T ss_dssp HHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCe-EEEEECC-CCCHHHHHHHHHHHHHH
Confidence 345678888885 6788877552 22233344445555644 4444433 55788888888888877
Q ss_pred h-CCCEEEEcc
Q 025565 108 E-KPGLIILGK 117 (251)
Q Consensus 108 ~-~~dlIl~G~ 117 (251)
. +.|+++.-.
T Consensus 99 ~g~id~lvnnA 109 (277)
T 3tsc_A 99 LGRLDIIVANA 109 (277)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 6 589888654
No 212
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=38.41 E-value=1.3e+02 Score=24.34 Aligned_cols=70 Identities=9% Similarity=0.057 Sum_probs=42.5
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcce
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGKQ 118 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~~ 118 (251)
-.+.|.+|+++ |.+|+.+.-..+..++..++ .|.. +..+..| -.|...+..++.++.++. ++|+++.-..
T Consensus 21 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~---~~~~-~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lv~~Ag 91 (259)
T 4e6p_A 21 GRAFAEAYVRE--GATVAIADIDIERARQAAAE---IGPA-AYAVQMD-VTRQDSIDAAIAATVEHAGGLDILVNNAA 91 (259)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHH---HCTT-EEEEECC-TTCHHHHHHHHHHHHHHSSSCCEEEECCC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---hCCC-ceEEEee-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 34667788875 66777665544332222222 2433 4444433 457888888888887776 6898887553
No 213
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=38.29 E-value=1.1e+02 Score=24.65 Aligned_cols=73 Identities=8% Similarity=-0.027 Sum_probs=44.7
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|++. .|.+|+++.-.+...++..+++...|.. +..+..| -.|...+..++.++.++. ++|+|+.-.
T Consensus 17 G~~~a~~L~~~-~g~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-l~~~~~~~~~~~~~~~~~g~id~li~~A 90 (276)
T 1wma_A 17 GLAIVRDLCRL-FSGDVVLTARDVTRGQAAVQQLQAEGLS-PRFHQLD-IDDLQSIRALRDFLRKEYGGLDVLVNNA 90 (276)
T ss_dssp HHHHHHHHHHH-SSSEEEEEESSHHHHHHHHHHHHHTTCC-CEEEECC-TTCHHHHHHHHHHHHHHHSSEEEEEECC
T ss_pred HHHHHHHHHHh-cCCeEEEEeCChHHHHHHHHHHHhcCCe-eEEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 34567778872 2668877766554444455555555643 4444333 457777777777777666 689887544
No 214
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=38.15 E-value=1.5e+02 Score=23.68 Aligned_cols=72 Identities=15% Similarity=0.148 Sum_probs=44.3
Q ss_pred HHHHHHHhhhhCCCceEEEEee-CCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSM-GPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~-G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.- .++..++..+++...|. ++..+..| -.|...+.+.+.++.++. ++|+++.-.
T Consensus 20 G~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~li~~A 93 (261)
T 1gee_A 20 GKSMAIRFATE--KAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGD-VTVESDVINLVQSAIKEFGKLDVMINNA 93 (261)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 34667778875 678887765 33333333444444554 45555433 457777777777777766 689888654
No 215
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=38.12 E-value=1.6e+02 Score=23.94 Aligned_cols=76 Identities=7% Similarity=-0.053 Sum_probs=46.1
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCch-hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEc
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPAQ-CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILG 116 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~~-~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G 116 (251)
.--..+.|.+|+++ |.+|+.+.--... .+...+.+...|. ++..+..| -.|...+...+.++.++. ++|+++.-
T Consensus 36 ~gIG~a~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-l~~~~~v~~~~~~~~~~~g~id~li~n 111 (272)
T 4e3z_A 36 RGIGAAVCRLAARQ--GWRVGVNYAANREAADAVVAAITESGG-EAVAIPGD-VGNAADIAAMFSAVDRQFGRLDGLVNN 111 (272)
T ss_dssp SHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred chHHHHHHHHHHHC--CCEEEEEcCCChhHHHHHHHHHHhcCC-cEEEEEcC-CCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 34456778888885 6677655333332 2333344444554 55555543 457777778777777776 68988865
Q ss_pred ce
Q 025565 117 KQ 118 (251)
Q Consensus 117 ~~ 118 (251)
..
T Consensus 112 Ag 113 (272)
T 4e3z_A 112 AG 113 (272)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 216
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=38.04 E-value=1.3e+02 Score=24.76 Aligned_cols=73 Identities=14% Similarity=0.123 Sum_probs=44.5
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHC-CCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAM-GADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~-GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+++.-.+...++..+++... |. ++..+..| -.|...+..++.++.++. ++|+|+.-.
T Consensus 38 iG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D-l~~~~~~~~~~~~~~~~~g~id~li~~A 112 (302)
T 1w6u_A 38 LGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCD-VRDPDMVQNTVSELIKVAGHPNIVINNA 112 (302)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECC-TTCHHHHHHHHHHHHHHTCSCSEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEeC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345677778875 678877665544333333333332 44 35555433 457777778877777766 589888654
No 217
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=37.98 E-value=1.6e+02 Score=23.95 Aligned_cols=74 Identities=11% Similarity=0.001 Sum_probs=46.7
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
--..+.|.+|++. |.+|+++.-.+...++..+++...|.. +..+..| -.|...+..++.++.++. ++|+|+.-.
T Consensus 42 gIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-l~~~~~v~~~~~~~~~~~g~iD~li~~A 116 (272)
T 1yb1_A 42 GIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAK-VHTFVVD-CSNREDIYSSAKKVKAEIGDVSILVNNA 116 (272)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHTCCCSEEEECC
T ss_pred hHHHHHHHHHHHC--CCEEEEEEcCHHHHHHHHHHHHhcCCe-EEEEEee-CCCHHHHHHHHHHHHHHCCCCcEEEECC
Confidence 3445677788875 678887766554444444555556653 4444433 457777777777777665 689888655
No 218
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=37.96 E-value=50 Score=24.85 Aligned_cols=43 Identities=14% Similarity=-0.092 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 94 PLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 94 ~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
....+..||+.++..++|+|+.-. ..+-.++..+|..||.|++
T Consensus 11 ~~~~~~~la~~i~~~~~d~iv~v~----~gg~~~a~~la~~l~~~~~ 53 (153)
T 1vdm_A 11 VDRAIFALAEKLREYKPDVIIGVA----RGGLIPAVRLSHILGDIPL 53 (153)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEET----TTTHHHHHHHHHHTTSCCE
T ss_pred HHHHHHHHHHHHHccCCCEEEEEC----CcCHHHHHHHHHHhCCCce
Confidence 344566777777666899877543 3456789999999999965
No 219
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=37.86 E-value=1.6e+02 Score=24.01 Aligned_cols=73 Identities=11% Similarity=0.048 Sum_probs=42.9
Q ss_pred HHHHHHHHhhhhCCCceEEEEee-CCchhHHHHHHHHHC-CCCEEEEEeeCCCCCH----HHHHHHHHHHHHHh-CCCEE
Q 025565 41 IALEEALRIKESGLASEVVAVSM-GPAQCVDTLRTGLAM-GADRGVHVEAAGQLYP----LTVAKILKSLVEVE-KPGLI 113 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~-G~~~~~~~l~~~la~-GaD~vi~v~~~~~~d~----~a~a~~La~~ik~~-~~dlI 113 (251)
--.+.|.+|+++ |.+|+++.- .++..++..+++-+. |. ++..+..| -.|. ..+..++.++.++. ++|++
T Consensus 23 IG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D-l~~~~~~~~~~~~~~~~~~~~~g~id~l 98 (276)
T 1mxh_A 23 IGHSIAVRLHQQ--GFRVVVHYRHSEGAAQRLVAELNAARAG-SAVLCKGD-LSLSSSLLDCCEDIIDCSFRAFGRCDVL 98 (276)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECC-CSSSTTHHHHHHHHHHHHHHHHSCCCEE
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHHhcCC-ceEEEecc-CCCccccHHHHHHHHHHHHHhcCCCCEE
Confidence 345677788875 678887766 443333333443333 54 34444433 3355 66777777777666 68988
Q ss_pred EEcc
Q 025565 114 ILGK 117 (251)
Q Consensus 114 l~G~ 117 (251)
+.-.
T Consensus 99 v~nA 102 (276)
T 1mxh_A 99 VNNA 102 (276)
T ss_dssp EECC
T ss_pred EECC
Confidence 8654
No 220
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=37.83 E-value=1e+02 Score=27.27 Aligned_cols=89 Identities=12% Similarity=0.155 Sum_probs=43.3
Q ss_pred HHHHhhhhCC-CceEEEEeeCCc--hhHHHHHHHHHCCC--CEEEEEeeCCCCCHHHHHH---HHHHHHHHhCCCEEEEc
Q 025565 45 EALRIKESGL-ASEVVAVSMGPA--QCVDTLRTGLAMGA--DRGVHVEAAGQLYPLTVAK---ILKSLVEVEKPGLIILG 116 (251)
Q Consensus 45 ~A~~lae~~~-g~~V~al~~G~~--~~~~~l~~~la~Ga--D~vi~v~~~~~~d~~a~a~---~La~~ik~~~~dlIl~G 116 (251)
....|++. . +.++..+.-|.. ...+.+ + .+|. |.-+-+......-...++. .+.+++++.+||+|++-
T Consensus 46 li~~l~~~-~~~~~~~~~~tG~h~~m~~~~~-~--~~~i~~~~~l~v~~~~~~~~~~~~~~~~~l~~~l~~~kPD~Vi~~ 121 (403)
T 3ot5_A 46 LVLALEKE-PETFESTVVITAQHREMLDQVL-E--IFDIKPDIDLDIMKKGQTLAEITSRVMNGINEVIAAENPDIVLVH 121 (403)
T ss_dssp HHHHHHTC-TTTEEEEEEECC-----CHHHH-H--HTTCCCSEECCCCC-CCCHHHHHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHhC-CCCCcEEEEEecCcHHHHHHHH-H--hcCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 34444443 3 557666666654 223333 2 3565 3222221111111222344 45566778899999863
Q ss_pred ceeecCCcCcHHHHHHHHcCCCcc
Q 025565 117 KQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 117 ~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
. |..+.-.+...|.++|+|++
T Consensus 122 g---d~~~~l~~~laA~~~~IPv~ 142 (403)
T 3ot5_A 122 G---DTTTSFAAGLATFYQQKMLG 142 (403)
T ss_dssp T---TCHHHHHHHHHHHHTTCEEE
T ss_pred C---CchhHHHHHHHHHHhCCCEE
Confidence 3 11111224677889999965
No 221
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=37.62 E-value=38 Score=28.51 Aligned_cols=41 Identities=10% Similarity=0.114 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHh--CCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 96 TVAKILKSLVEVE--KPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 96 a~a~~La~~ik~~--~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
.+++.+++.+++. ++|+|+.... .+--++..+|..|+.|++
T Consensus 85 ~l~~~la~~i~~~~~~~DvIvg~~~----gGi~~A~~lA~~L~~p~~ 127 (243)
T 3dez_A 85 LIENGFVETIKEAFPEVEVIAGTAT----AGIPHGAIIADKMNLPLA 127 (243)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEETT----TTHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEEecC----chHHHHHHHHHHcCCCEE
Confidence 4567777777765 7898887663 334688999999999974
No 222
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=37.12 E-value=26 Score=25.18 Aligned_cols=40 Identities=8% Similarity=0.046 Sum_probs=26.6
Q ss_pred CCCEEEEcceeecC-CcCcHHHHHHHHcCCCcccceeeEEEe
Q 025565 109 KPGLIILGKQAIDD-DCNQTGQMVAGLLSWPQGTFASKVVLD 149 (251)
Q Consensus 109 ~~dlIl~G~~s~d~-~~~~v~~~lA~~Lg~p~vt~v~~l~~~ 149 (251)
+|-+|+++....+. +|.++-..||++|++|. ++-+++++.
T Consensus 3 eygYI~~~~~~ls~~eG~~l~~~la~ll~l~~-~~Ft~i~V~ 43 (91)
T 2qt7_A 3 EYGYIVTDQKPLSLAAGVKLLEILAEHVHMSS-GSFINISVV 43 (91)
T ss_dssp CEEEEEESCTTCCHHHHHHHHHHHHHHHTSCG-GGEEEEEEE
T ss_pred eeEEEEecCCCCCHHHHHHHHHHHHHHhcCCc-cceeeeEee
Confidence 45667776543222 57789999999999995 344455555
No 223
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=37.11 E-value=1.7e+02 Score=23.90 Aligned_cols=74 Identities=15% Similarity=0.122 Sum_probs=45.6
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHH-HHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTG-LAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~-la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
--..+.|.+|+++ |.+|+++.-.++..++..+++ -..|.. +..+..| -.|...+..++.++.++. +.|+++.-.
T Consensus 32 gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D-l~~~~~v~~~~~~~~~~~g~iD~lvnnA 107 (267)
T 1vl8_A 32 GLGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLTEKYGVE-TMAFRCD-VSNYEEVKKLLEAVKEKFGKLDTVVNAA 107 (267)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCe-EEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3445677888875 678887766544333333333 234544 4444433 457777888887777776 689888644
No 224
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=36.92 E-value=1e+02 Score=22.34 Aligned_cols=44 Identities=14% Similarity=-0.028 Sum_probs=31.7
Q ss_pred HHHHHHHhhhhCCCceEEEEee--CCchhHHHHHHHHHCCCCEEEEEe
Q 025565 42 ALEEALRIKESGLASEVVAVSM--GPAQCVDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~--G~~~~~~~l~~~la~GaD~vi~v~ 87 (251)
.-..+.++++.. ..|..-++ +.++.++.++++.+.|+++++++.
T Consensus 24 ~~~l~~~l~~~~--~~V~~a~le~~~P~l~~~l~~l~~~G~~~vvvvP 69 (126)
T 3lyh_A 24 FEKLAEPTVESI--ENAAIAYMELAEPSLDTIVNRAKGQGVEQFTVVP 69 (126)
T ss_dssp HHHHHHHHHHHS--TTCEEEESSSSSSBHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHhhc--CCEEEEEEeCCCCCHHHHHHHHHHcCCCEEEEEe
Confidence 344556666663 34544444 666788999999999999999987
No 225
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=36.49 E-value=1.2e+02 Score=22.04 Aligned_cols=57 Identities=18% Similarity=0.101 Sum_probs=34.7
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHH
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSL 104 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ 104 (251)
.++...+|++......|++++--.. .+...+++..|++..+. . .++...+...|..+
T Consensus 98 g~~~~~~lr~~~~~~~ii~ls~~~~--~~~~~~~~~~g~~~~l~-K---P~~~~~l~~~i~~~ 154 (157)
T 3hzh_A 98 GITCLSNIMEFDKNARVIMISALGK--EQLVKDCLIKGAKTFIV-K---PLDRAKVLQRVMSV 154 (157)
T ss_dssp HHHHHHHHHHHCTTCCEEEEESCCC--HHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHT
T ss_pred HHHHHHHHHhhCCCCcEEEEeccCc--HHHHHHHHHcCCCEEEe-C---CCCHHHHHHHHHHH
Confidence 4566666776544556665554432 46677889999987544 2 45666655555544
No 226
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=36.48 E-value=94 Score=27.10 Aligned_cols=61 Identities=16% Similarity=0.088 Sum_probs=38.7
Q ss_pred HCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-----CCCEEEEcceeecCCcCcHHHHHHHHcCCC
Q 025565 77 AMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-----KPGLIILGKQAIDDDCNQTGQMVAGLLSWP 138 (251)
Q Consensus 77 a~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-----~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p 138 (251)
..|..+-+....+ ....+-.+.+..+++++- +.|.|++|.++.|......+.+++.+||+|
T Consensus 51 ~tGI~~R~~a~~~-~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~ 116 (354)
T 4efi_A 51 MIGVNRRRWADAQ-TSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLP 116 (354)
T ss_dssp HHCCSEEECCCTT-CCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCC
T ss_pred hcCCeEEEEcCCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcC
Confidence 3477766655422 212223334444455442 468999998877777777899999999986
No 227
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=36.29 E-value=44 Score=28.73 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=26.7
Q ss_pred HHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 100 ILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 100 ~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
.+.+.+++.+||+|++-.. ...+..+|..+|+|++...
T Consensus 98 ~l~~~l~~~~pD~Vi~~~~------~~~~~~~a~~~giP~v~~~ 135 (384)
T 2p6p_A 98 RMLDFSRAWRPDLIVGGTM------SYVAPLLALHLGVPHARQT 135 (384)
T ss_dssp HHHHHHHHHCCSEEEEETT------CTHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHhccCCcEEEECcc------hhhHHHHHHhcCCCEEEec
Confidence 3445567779999997432 2356678999999987554
No 228
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=36.22 E-value=50 Score=30.25 Aligned_cols=72 Identities=17% Similarity=0.120 Sum_probs=48.1
Q ss_pred HHhhhhCCCceEEEEeeCC---chhHHHHHHHHHCCCCEEEEEeeCCC-------------------C-CHH-----HHH
Q 025565 47 LRIKESGLASEVVAVSMGP---AQCVDTLRTGLAMGADRGVHVEAAGQ-------------------L-YPL-----TVA 98 (251)
Q Consensus 47 ~~lae~~~g~~V~al~~G~---~~~~~~l~~~la~GaD~vi~v~~~~~-------------------~-d~~-----a~a 98 (251)
..|+++ |.+|+++++-- .+.+.+-+.|..+|+.+.+.++-... + .+. ..+
T Consensus 32 ~~Lke~--G~eViavt~d~Gq~~Ele~A~~vA~~lGi~~~~VvDl~eef~~~v~~p~i~~na~yeg~Y~~g~~l~Rp~i~ 109 (421)
T 1vl2_A 32 KWLCEK--GFDVIAYVANVGQKDDFVAIKEKALKTGASKVYVEDLRREFVTDYIFTALLGNAMYEGRYLLGTAIARPLIA 109 (421)
T ss_dssp HHHHHT--TCEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHTTTCCBTTTBCCHHHHHHHHHH
T ss_pred HHHHHC--CCeEEEEEEEcCCHHHHHHHHHHHHHcCCceEEEEecHHHHHHhhhhHHHhcCCcccCceeCCCcccHHHHH
Confidence 344554 77999988743 23566677799999987777763210 1 111 134
Q ss_pred HHHHHHHHHhCCCEEEEcceee
Q 025565 99 KILKSLVEVEKPGLIILGKQAI 120 (251)
Q Consensus 99 ~~La~~ik~~~~dlIl~G~~s~ 120 (251)
..+.+.+++.++|.|..|++..
T Consensus 110 ~~l~~~A~~~Gad~IA~G~~~k 131 (421)
T 1vl2_A 110 KRQVEIAEKEGAQYVAHGATGK 131 (421)
T ss_dssp HHHHHHHHHHTCSEEECCCCTT
T ss_pred HHHHHHHHHcCCCEEEECCeeC
Confidence 5677788889999999999864
No 229
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=35.89 E-value=50 Score=28.53 Aligned_cols=52 Identities=19% Similarity=0.280 Sum_probs=37.5
Q ss_pred chhHHHHHHHHHCCCCEEE-EEeeCC---CCCHHHHHHHHHHHHHHhCCCEEEEcce
Q 025565 66 AQCVDTLRTGLAMGADRGV-HVEAAG---QLYPLTVAKILKSLVEVEKPGLIILGKQ 118 (251)
Q Consensus 66 ~~~~~~l~~~la~GaD~vi-~v~~~~---~~d~~a~a~~La~~ik~~~~dlIl~G~~ 118 (251)
++..+...+|...||.-++ |+.|+. ..|++.|..++. .|++..||+|+--.|
T Consensus 34 eEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~-~IR~~~pd~ii~~TT 89 (284)
T 3chv_A 34 SEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTE-GLHTHCPGMIVQFST 89 (284)
T ss_dssp HHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHH-HHHHHSTTCEEEECC
T ss_pred HHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHH-HHHHhCCCeEEEeCC
Confidence 3344556778888998665 455543 369999999995 667668899997666
No 230
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=35.85 E-value=93 Score=25.91 Aligned_cols=73 Identities=8% Similarity=-0.052 Sum_probs=44.2
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcce
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGKQ 118 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~~ 118 (251)
..+.|++|+++ |.+|+.+.-..+..++..+++...|. ++..+..| -.|...+...+.++.++. +.|+++.-..
T Consensus 21 G~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~g~iD~lvnnAg 94 (280)
T 3tox_A 21 GRAAALLFARE--GAKVVVTARNGNALAELTDEIAGGGG-EAAALAGD-VGDEALHEALVELAVRRFGGLDTAFNNAG 94 (280)
T ss_dssp HHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHTTTTC-CEEECCCC-TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 45677888875 66776554443333334444434454 44444433 457777888888777776 6898886543
No 231
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=35.77 E-value=93 Score=21.68 Aligned_cols=61 Identities=8% Similarity=-0.047 Sum_probs=37.7
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHH
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEV 107 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~ 107 (251)
..++...+|++..++..++.++-.. ..+...+++..|++..+. . ..+......+|..+++.
T Consensus 60 ~g~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~l~-k---p~~~~~l~~~i~~~~~~ 120 (134)
T 3f6c_A 60 NGIQVLETLRKRQYSGIIIIVSAKN--DHFYGKHCADAGANGFVS-K---KEGMNNIIAAIEAAKNG 120 (134)
T ss_dssp CHHHHHHHHHHTTCCSEEEEEECC-----CTHHHHHHTTCSEEEE-G---GGCTHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHhcCCCCeEEEEeCCC--ChHHHHHHHHhCCCEEEe-C---CCCHHHHHHHHHHHHCC
Confidence 3456666777664555555554433 245678899999997544 2 35667777777777654
No 232
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=35.76 E-value=1.9e+02 Score=24.02 Aligned_cols=70 Identities=6% Similarity=-0.068 Sum_probs=47.3
Q ss_pred HHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 43 LEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
.+.|++|+++ |..|+...--.+. .+.+.+....|..-.+ +..| -.|.....+.+.+++++. +.|+++--.
T Consensus 21 ~aia~~la~~--Ga~Vv~~~r~~~~-~~~~~~~~~~~~~~~~-~~~D-v~~~~~v~~~v~~~~~~~G~iDiLVNnA 91 (258)
T 4gkb_A 21 GAISMRLAEE--RAIPVVFARHAPD-GAFLDALAQRQPRATY-LPVE-LQDDAQCRDAVAQTIATFGRLDGLVNNA 91 (258)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCCC-HHHHHHHHHHCTTCEE-EECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHc--CCEEEEEECCccc-HHHHHHHHhcCCCEEE-EEee-cCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 4567788885 6777776665543 4455666666765443 3323 557888888899998887 589888654
No 233
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=35.69 E-value=1.1e+02 Score=26.81 Aligned_cols=61 Identities=16% Similarity=0.093 Sum_probs=42.5
Q ss_pred HCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-----CCCEEEEcceeecCCcCcHHHHHHHHcCCC
Q 025565 77 AMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-----KPGLIILGKQAIDDDCNQTGQMVAGLLSWP 138 (251)
Q Consensus 77 a~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-----~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p 138 (251)
..|..+-++..++ ....+-.+.+..+++++- +.|.|++|.++.|......+.+++.+||++
T Consensus 65 ~tGI~~R~~a~~~-~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~ 130 (365)
T 3gwa_A 65 KTGIRERRIAAPR-ETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIP 130 (365)
T ss_dssp HHCCCEEEECCTT-CCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCC
T ss_pred hcCccEEEECCCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCC
Confidence 4688888877532 222333344555566543 468999998887776677899999999998
No 234
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=35.11 E-value=1.3e+02 Score=24.81 Aligned_cols=83 Identities=12% Similarity=0.056 Sum_probs=50.8
Q ss_pred ceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCC--------C--CCH----HHHHHHHHHHHHHh-------------
Q 025565 56 SEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG--------Q--LYP----LTVAKILKSLVEVE------------- 108 (251)
Q Consensus 56 ~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~--------~--~d~----~a~a~~La~~ik~~------------- 108 (251)
.+|..+-.|+-. .+.++.+...|+.++.+++.|. . +.. ..-+.++++.+++.
T Consensus 29 ~~VlvvG~GglG-~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 107 (251)
T 1zud_1 29 SQVLIIGLGGLG-TPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL 107 (251)
T ss_dssp CEEEEECCSTTH-HHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CcEEEEccCHHH-HHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 478888888753 5678889999999999987652 0 110 02234444444332
Q ss_pred ----------CCCEEEEcceeecCCcCcHHHHHHHHcCCCccc
Q 025565 109 ----------KPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGT 141 (251)
Q Consensus 109 ----------~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 141 (251)
++|+|+...-+ ..++..-...+...+.|+++
T Consensus 108 ~~~~~~~~~~~~DvVi~~~d~--~~~r~~l~~~~~~~~~p~i~ 148 (251)
T 1zud_1 108 TGEALKDAVARADVVLDCTDN--MATRQEINAACVALNTPLIT 148 (251)
T ss_dssp CHHHHHHHHHHCSEEEECCSS--HHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHhcCCEEEECCCC--HHHHHHHHHHHHHhCCCEEE
Confidence 36888855422 12344555666778899875
No 235
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=35.03 E-value=1.1e+02 Score=21.45 Aligned_cols=60 Identities=18% Similarity=0.009 Sum_probs=38.2
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHH
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEV 107 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~ 107 (251)
.++...+|++......+++++-.. ..+....++..|++..+.- ..+.......|..+++.
T Consensus 67 g~~~~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~g~~~~l~k----p~~~~~l~~~l~~~~~~ 126 (140)
T 2qr3_A 67 GLFWLHEIKRQYRDLPVVLFTAYA--DIDLAVRGIKEGASDFVVK----PWDNQKLLETLLNAASQ 126 (140)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEEGG--GHHHHHHHHHTTCCEEEEE----SCCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhhCcCCCEEEEECCC--CHHHHHHHHHcCchheeeC----CCCHHHHHHHHHHHHHh
Confidence 455566666654455666655443 3566788999999975542 35677777777776653
No 236
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=34.75 E-value=53 Score=28.98 Aligned_cols=104 Identities=16% Similarity=0.167 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHhCCCEEEE-cceeecCCcCcHHHHHHHHcCCCcccceeeEEEecCCCeEEEEEEeCCeEEEEEEC-
Q 025565 94 PLTVAKILKSLVEVEKPGLIIL-GKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELD- 171 (251)
Q Consensus 94 ~~a~a~~La~~ik~~~~dlIl~-G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~l~~~R~~~gG~~~~~~~- 171 (251)
+......+.+.+++.++|+|+. |.- ...+++-.+|.+.+.|++.--+-. ...|-+.+.+.. ..+-+..+.-.
T Consensus 72 ~~~~v~~~~~~~~~~~~D~IIavGGG----s~iD~aK~iA~~~~~p~i~IPTTa-tgSe~t~~~v~~-~~~~K~~~~~~~ 145 (353)
T 3hl0_A 72 PVEVTKTAVEAYRAAGADCVVSLGGG----STTGLGKAIALRTDAAQIVIPTTY-AGSEVTPILGQT-ENGVKTTMRGPE 145 (353)
T ss_dssp BHHHHHHHHHHHHHTTCSEEEEEESH----HHHHHHHHHHHHHCCEEEEEECSS-CCGGGCCEEEEE-ETTEEEEEECTT
T ss_pred cHHHHHHHHHHHhccCCCEEEEeCCc----HHHHHHHHHHhccCCCEEEEeCCc-hhhhccCceEEc-CCCeeEeeecCC
Confidence 3455566667778889998764 332 223488899999999987544433 221112232222 22334444433
Q ss_pred -CCEEEEEeCCCCC--CCCCChHHHHHhcCCCcee
Q 025565 172 -LPAVITTDLRLNQ--PRYATLPNIMKAKSKPIKK 203 (251)
Q Consensus 172 -~P~vvtv~~~~~~--pr~p~l~~i~~A~k~~i~~ 203 (251)
.|.++-+.+.... |+.-...+.+.|-++-+|.
T Consensus 146 ~~P~~vi~Dp~l~~tlP~~~~aag~~Dal~ha~Ea 180 (353)
T 3hl0_A 146 ILPEVVIYDAELTLGLPVAISMTSGLNAMAHAAEA 180 (353)
T ss_dssp TSCSEEEECGGGGTTSCHHHHHHHHHHHHHHHHHH
T ss_pred cCccEEEEChHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 5888888876543 4334445566665555543
No 237
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=34.75 E-value=34 Score=29.57 Aligned_cols=56 Identities=21% Similarity=0.191 Sum_probs=38.4
Q ss_pred EEEeeC--CchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecC
Q 025565 59 VAVSMG--PAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDD 122 (251)
Q Consensus 59 ~al~~G--~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~ 122 (251)
+++.+| .....+.++++.+.|+|-.+.-+- ....+ ....++.+-.+|++|+.+++.
T Consensus 198 IaV~~GgGtsG~~~~i~~a~~~GvDt~ITGe~----~~~~~----~~~A~E~ginVI~AGHyATEt 255 (278)
T 3rxy_A 198 IAVVHGAGTNGGYAVARAYFDHGVRTVLYIHI----APEEA----ERLRREGGGNLIVTGHIASDL 255 (278)
T ss_dssp EEECCSSSSCCHHHHHHHHHHTTCCEEEESCC----CHHHH----HHHHHHCSSEEEECCHHHHHH
T ss_pred EEEEcCCCCCCcHHHHHHHHHcCCCEEEEecC----chHHH----HHHHHHcCCeEEEeccchHhH
Confidence 355555 223467899999999998887542 22222 134556689999999998775
No 238
>3qek_A NMDA glutamate receptor subunit; amino terminal domain, ION channel, NMDA receptor, allosteri modulation, phenylethanolamine, polyamine; HET: NAG BMA; 2.00A {Xenopus laevis} PDB: 3qel_A* 3qem_A* 3q41_A*
Probab=34.63 E-value=42 Score=29.00 Aligned_cols=60 Identities=12% Similarity=0.058 Sum_probs=36.3
Q ss_pred EEEEeeCCCCCHHHHHHHHHH-HHHHhCCCEEEEcceee--cCCcCcHHHHHHHHcCCCcccce
Q 025565 83 GVHVEAAGQLYPLTVAKILKS-LVEVEKPGLIILGKQAI--DDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 83 vi~v~~~~~~d~~a~a~~La~-~ik~~~~dlIl~G~~s~--d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
+.++..|...|+...+..+++ ++.+ +.+.|+-+.++. ..........++..+++|+++..
T Consensus 39 l~~~~~d~~~d~~~a~~~~~~~Li~~-~V~aiiG~~~~~~~~s~~~~a~~~~~~~~~iP~is~~ 101 (384)
T 3qek_A 39 LQATSVTHRPNAIQMALSVCEDLISS-QVYAILVSHPPAPTDHLTPTPISYTAGFYRIPVIGLT 101 (384)
T ss_dssp EEEEEEECCSSHHHHHHHHHHHTGGG-TEEEEEECC--------CCHHHHHHHHTTTCCEEESS
T ss_pred EEEEEecccCCHHHHHHHHHHHHHHc-CceEEEEecCCCCccchhHHHHHHHHhcCCCCEEecc
Confidence 333333346788888877777 5664 777777643321 22233455678899999999754
No 239
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=34.60 E-value=1.6e+02 Score=22.72 Aligned_cols=44 Identities=16% Similarity=0.223 Sum_probs=27.7
Q ss_pred CHHHHHHHHHHHHHHhCCCEEEE-cceeecCCcCcHHHHHHHHcCC
Q 025565 93 YPLTVAKILKSLVEVEKPGLIIL-GKQAIDDDCNQTGQMVAGLLSW 137 (251)
Q Consensus 93 d~~a~a~~La~~ik~~~~dlIl~-G~~s~d~~~~~v~~~lA~~Lg~ 137 (251)
|.+.+.++|.++++..++|+|++ |.++.+ .--.+..-++..++.
T Consensus 55 d~~~i~~~l~~~~~~~~~DlVittGG~g~g-~~D~t~~a~~~~~~~ 99 (167)
T 1uuy_A 55 EVERIKDILQKWSDVDEMDLILTLGGTGFT-PRDVTPEATKKVIER 99 (167)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEEESCCSSS-TTCCHHHHHHHHCSE
T ss_pred CHHHHHHHHHHHHhcCCCCEEEECCCCCCC-CCCchHHHHHHHhcC
Confidence 57778888888776457897776 444433 334456666666543
No 240
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=34.53 E-value=1.8e+02 Score=23.52 Aligned_cols=72 Identities=13% Similarity=0.116 Sum_probs=44.5
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCch-hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQ-CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~-~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-.+.|.+|+++ |.+|+.+.-.... .++..+++...|.. +..+..| -.|.......+.++.++. +.|+++.-.
T Consensus 21 G~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 94 (259)
T 3edm_A 21 GRACAIRFAQE--GANVVLTYNGAAEGAATAVAEIEKLGRS-ALAIKAD-LTNAAEVEAAISAAADKFGEIHGLVHVA 94 (259)
T ss_dssp HHHHHHHHHHT--TCEEEEEECSSCHHHHHHHHHHHTTTSC-CEEEECC-TTCHHHHHHHHHHHHHHHCSEEEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCc-eEEEEcC-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 35677888875 6777765333332 33344555555644 4444433 557888888888888776 578888644
No 241
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=34.47 E-value=50 Score=28.71 Aligned_cols=50 Identities=14% Similarity=0.042 Sum_probs=25.1
Q ss_pred CCceEEEEeeCCchhHHHHHHHHHC-CCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEE
Q 025565 54 LASEVVAVSMGPAQCVDTLRTGLAM-GADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLII 114 (251)
Q Consensus 54 ~g~~V~al~~G~~~~~~~l~~~la~-GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl 114 (251)
.|.+|.+.-.|+ --.-+++-|.++ |+ +++.++.. +.. .+.+++.+.|.++
T Consensus 186 ~g~~VlV~GaG~-vG~~avqlak~~~Ga-~Vi~~~~~----~~~-----~~~~~~lGa~~vi 236 (359)
T 1h2b_A 186 PGAYVAIVGVGG-LGHIAVQLLKVMTPA-TVIALDVK----EEK-----LKLAERLGADHVV 236 (359)
T ss_dssp TTCEEEEECCSH-HHHHHHHHHHHHCCC-EEEEEESS----HHH-----HHHHHHTTCSEEE
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCC-eEEEEeCC----HHH-----HHHHHHhCCCEEE
Confidence 455554444432 112345556667 88 67766521 111 1234556777666
No 242
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=34.31 E-value=16 Score=28.69 Aligned_cols=46 Identities=15% Similarity=0.229 Sum_probs=27.8
Q ss_pred HHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccceee
Q 025565 100 ILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASK 145 (251)
Q Consensus 100 ~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 145 (251)
.+++.+++-+-=+|++|......+..+-.-++|+++|+|+++....
T Consensus 26 ~aa~~L~~AkrPvil~G~g~~~~~a~~~l~~lae~~~iPV~~t~~g 71 (170)
T 3cf4_G 26 MAAKIISKAKRPLLMVGTLALDPELLDRVVKISKAANIPIAATGSS 71 (170)
T ss_dssp HHHHHHHHCSSEEEEECSTTCCHHHHHHHHHHHHHHTCCEEECTTT
T ss_pred HHHHHHHcCCCCEEEECCCccchhHHHHHHHHHHHhCCCEEECccc
Confidence 3444555434446666664433233445678999999998876543
No 243
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=34.22 E-value=1.4e+02 Score=24.63 Aligned_cols=71 Identities=14% Similarity=0.142 Sum_probs=42.3
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
--..+.|.+|+++ |.+|+.+.-..+..++..++ .| .++..+..| -.|...+.+.+.++.++. ++|+++.-.
T Consensus 39 GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lVnnA 110 (272)
T 4dyv_A 39 GVGRAVAVALAGA--GYGVALAGRRLDALQETAAE---IG-DDALCVPTD-VTDPDSVRALFTATVEKFGRVDVLFNNA 110 (272)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHH---HT-SCCEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHH---hC-CCeEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3445677788875 66776655443322222222 23 344444433 457788888888877776 689888654
No 244
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=34.21 E-value=48 Score=28.71 Aligned_cols=16 Identities=6% Similarity=0.027 Sum_probs=8.7
Q ss_pred HHHHHHHCCCCEEEEE
Q 025565 71 TLRTGLAMGADRGVHV 86 (251)
Q Consensus 71 ~l~~~la~GaD~vi~v 86 (251)
+++-|.++|+..+..+
T Consensus 184 aiqlak~~Ga~vi~~~ 199 (364)
T 1gu7_A 184 ASQIGKLLNFNSISVI 199 (364)
T ss_dssp HHHHHHHHTCEEEEEE
T ss_pred HHHHHHHCCCEEEEEe
Confidence 4455666788533333
No 245
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=34.06 E-value=1.2e+02 Score=25.97 Aligned_cols=61 Identities=11% Similarity=0.112 Sum_probs=41.0
Q ss_pred CCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-----CCCEEEEcceeecCCcCcHHHHHHHHcCCCc
Q 025565 78 MGADRGVHVEAAGQLYPLTVAKILKSLVEVE-----KPGLIILGKQAIDDDCNQTGQMVAGLLSWPQ 139 (251)
Q Consensus 78 ~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-----~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~ 139 (251)
-|..+-++...++ ...+--..+..+++++- +.|+|+++.++.|......+.+|+.+||++-
T Consensus 48 tGI~~R~~a~~~e-~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~ 113 (350)
T 4ewp_A 48 TGIVTRQRATAEE-TVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATP 113 (350)
T ss_dssp HCCSEEECCCSSC-CHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTT
T ss_pred cCceEEEEcCCCC-CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCC
Confidence 3877776665332 22222234444555542 4689999998888777889999999999864
No 246
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=34.02 E-value=1.8e+02 Score=23.37 Aligned_cols=72 Identities=7% Similarity=0.053 Sum_probs=45.4
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCch--hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQ--CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~--~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.-.++. .++..+++-..|. ++..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 15 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~g~iD~lv~nA 89 (258)
T 3a28_C 15 GRGISEKLAAD--GFDIAVADLPQQEEQAAETIKLIEAADQ-KAVFVGLD-VTDKANFDSAIDEAAEKLGGFDVLVNNA 89 (258)
T ss_dssp HHHHHHHHHHH--TCEEEEEECGGGHHHHHHHHHHHHTTTC-CEEEEECC-TTCHHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHHhcCC-cEEEEEcc-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 34677788886 6788777655443 3334444444454 35555433 457777778888777776 689888654
No 247
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=33.80 E-value=1.9e+02 Score=23.48 Aligned_cols=76 Identities=8% Similarity=-0.044 Sum_probs=45.3
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCchh-HHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEc
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPAQC-VDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILG 116 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~~~-~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G 116 (251)
.--..+.|.+|++. |.+|+++....... ++.+......|. ++..+..| -.|...+.+.+.++.++. +.|+++..
T Consensus 35 ~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-l~~~~~v~~~~~~~~~~~g~id~li~n 110 (269)
T 3gk3_A 35 GGLGAAISRRLHDA--GMAVAVSHSERNDHVSTWLMHERDAGR-DFKAYAVD-VADFESCERCAEKVLADFGKVDVLINN 110 (269)
T ss_dssp SHHHHHHHHHHHTT--TCEEEEEECSCHHHHHHHHHHHHTTTC-CCEEEECC-TTCHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred chHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCC-ceEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 34446677888875 66777665444322 223333444443 34444433 457777778887777776 68988865
Q ss_pred ce
Q 025565 117 KQ 118 (251)
Q Consensus 117 ~~ 118 (251)
..
T Consensus 111 Ag 112 (269)
T 3gk3_A 111 AG 112 (269)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 248
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=33.53 E-value=1.8e+02 Score=23.20 Aligned_cols=70 Identities=13% Similarity=0.043 Sum_probs=44.0
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+++.-.+...++..++. |. ++..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 24 iG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~li~~A 94 (265)
T 2o23_A 24 LGLATAERLVGQ--GASAVLLDLPNSGGEAQAKKL---GN-NCVFAPAD-VTSEKDVQTALALAKGKFGRVDVAVNCA 94 (265)
T ss_dssp HHHHHHHHHHHT--TCEEEEEECTTSSHHHHHHHH---CT-TEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCcHhHHHHHHHh---CC-ceEEEEcC-CCCHHHHHHHHHHHHHHCCCCCEEEECC
Confidence 345677778875 678888776665444443333 43 34444433 457777777777777766 689888654
No 249
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=33.50 E-value=1.8e+02 Score=23.06 Aligned_cols=73 Identities=10% Similarity=0.117 Sum_probs=45.7
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.+.+|+++ |.+|+++.-.++..++..+++...|.. +..+..| -.|...+..++.++.++. ++|+|+.-.
T Consensus 23 iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~~~~d~vi~~A 96 (255)
T 1fmc_A 23 IGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQ-AFACRCD-ITSEQELSALADFAISKLGKVDILVNNA 96 (255)
T ss_dssp HHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHHhCCc-eEEEEcC-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 345667778875 678887766554434444555555654 4444433 457777777777776665 689888644
No 250
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=33.35 E-value=31 Score=30.59 Aligned_cols=104 Identities=15% Similarity=0.114 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHhCCCEEEE-cceeecCCcCcHHHHHHHHcCCCcccceeeEEEecCCCeEEEEEEeCCeEEEEEE--
Q 025565 94 PLTVAKILKSLVEVEKPGLIIL-GKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLEL-- 170 (251)
Q Consensus 94 ~~a~a~~La~~ik~~~~dlIl~-G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~l~~~R~~~gG~~~~~~-- 170 (251)
+......+.+.+++.++|+|+. |.- ..-+++-.+|.+.+.|++.--+.. ...|-+.+.+.. ..+-+..+.-
T Consensus 74 ~~~~v~~~~~~~~~~~~D~IIavGGG----sviD~aK~iA~~~~~p~i~IPTT~-tgSevt~~~v~~-~~~~K~~~~~~~ 147 (358)
T 3jzd_A 74 PIESARDATARAREAGADCAVAVGGG----STTGLGKAIALETGMPIVAIPTTY-AGSEVTPVYGLT-EAGTKRTGRDPR 147 (358)
T ss_dssp BHHHHHHHHHHHHHHTCSEEEEEESH----HHHHHHHHHHHHHCCCEEEEECSS-CCGGGCSEEEEE-ETTEEEEEECGG
T ss_pred CHHHHHHHHHHhhccCCCEEEEeCCc----HHHHHHHHHHhccCCCEEEEeCCc-cccccccceEEc-CCCeeEeeccCC
Confidence 3455666667778889997764 332 223488889999999987543332 111112222222 2233444432
Q ss_pred CCCEEEEEeCCCCC--CCCCChHHHHHhcCCCcee
Q 025565 171 DLPAVITTDLRLNQ--PRYATLPNIMKAKSKPIKK 203 (251)
Q Consensus 171 ~~P~vvtv~~~~~~--pr~p~l~~i~~A~k~~i~~ 203 (251)
-.|.++-+.+.... |+.-...+.+.|-++-+|.
T Consensus 148 ~~P~~vi~Dp~l~~tlP~~~~aag~~Dal~ha~Ea 182 (358)
T 3jzd_A 148 VLPRTVIYDPALTVGLPRGLSVTSALNAIAHAAEG 182 (358)
T ss_dssp GSCSEEEECGGGGTTSCHHHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEChHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 26888888876543 4333444556665555544
No 251
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=33.26 E-value=1.5e+02 Score=23.45 Aligned_cols=72 Identities=18% Similarity=0.138 Sum_probs=42.9
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHH-HHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTG-LAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~-la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.-.++..++..+++ -..|. ++..+..| -.|...+..++.++.++. ++|+|+.-.
T Consensus 15 G~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~~~~~~~~~~~~~~~id~li~~A 88 (250)
T 2cfc_A 15 GLAIATRFLAR--GDRVAALDLSAETLEETARTHWHAYAD-KVLRVRAD-VADEGDVNAAIAATMEQFGAIDVLVNNA 88 (250)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHSTTTGG-GEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEec-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 34567778875 668877765543333333333 22343 34445433 457777777777777766 689888654
No 252
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=33.08 E-value=1.2e+02 Score=27.01 Aligned_cols=68 Identities=19% Similarity=0.026 Sum_probs=39.7
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHH--HHHHHHHHHhCCCEEEEcc
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVA--KILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a--~~La~~ik~~~~dlIl~G~ 117 (251)
..++..++.+++. |.+++++.-.+....... .-+|+.+.+. +. +...|. ..|.+++++.++|+|+.|.
T Consensus 12 ~~~~~~~~a~~~~--G~~vv~v~~~~~~~~~~~-----~~ad~~~~~~-p~--~~~~~~d~~~l~~~~~~~~~d~v~~~~ 81 (451)
T 1ulz_A 12 EIAVRIIRACKEL--GIPTVAIYNEVESTARHV-----KLADEAYMIG-TD--PLDTYLNKQRIINLALEVGADAIHPGY 81 (451)
T ss_dssp HHHHHHHHHHHHH--TCCEEEEECGGGTTCHHH-----HHSSEEEECC-SS--TTHHHHCHHHHHHHHHHTTCCEEECCS
T ss_pred HHHHHHHHHHHHc--CCeEEEEechhhcccchh-----hhCcEEEEcC-CC--cccccCCHHHHHHHHHHcCCCEEEECC
Confidence 3456666666664 677777653322101111 1268887764 21 222333 6778888888999999874
No 253
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=32.99 E-value=1.5e+02 Score=23.87 Aligned_cols=69 Identities=9% Similarity=-0.022 Sum_probs=38.6
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+.+.-.++..++..++. |. ++..+..| -.|...+..++.++.++. +.|+++.-.
T Consensus 20 G~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 89 (257)
T 3tpc_A 20 GAAVTRMLAQE--GATVLGLDLKPPAGEEPAAEL---GA-AVRFRNAD-VTNEADATAALAFAKQEFGHVHGLVNCA 89 (257)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSCC----------------CEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHh---CC-ceEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 35667778875 678877766655433333332 32 34444433 457778888888877776 689888654
No 254
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=32.99 E-value=2e+02 Score=23.42 Aligned_cols=73 Identities=11% Similarity=0.111 Sum_probs=46.3
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeC------------CchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh
Q 025565 41 IALEEALRIKESGLASEVVAVSMG------------PAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE 108 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G------------~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~ 108 (251)
-..+.|++|+++ |.+|+.+... ....++...+....|. ++..+..| -.|...+.+.+.++.++.
T Consensus 22 IG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~ 97 (287)
T 3pxx_A 22 QGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVD-VRDRAAVSRELANAVAEF 97 (287)
T ss_dssp HHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECC-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEcc-CCCHHHHHHHHHHHHHHc
Confidence 345678888885 6788776554 2222333344445564 45555433 567888888888888776
Q ss_pred -CCCEEEEcc
Q 025565 109 -KPGLIILGK 117 (251)
Q Consensus 109 -~~dlIl~G~ 117 (251)
+.|+++.-.
T Consensus 98 g~id~lv~nA 107 (287)
T 3pxx_A 98 GKLDVVVANA 107 (287)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 689888654
No 255
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=32.84 E-value=1.5e+02 Score=24.45 Aligned_cols=68 Identities=9% Similarity=0.084 Sum_probs=39.2
Q ss_pred HHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 43 LEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
.+.|.+|+++ |.+|+.+.-..+..++..++. |.. +..+..| -.|...+...+.++.++. ++|+++.-.
T Consensus 43 ~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 111 (277)
T 3gvc_A 43 LAVARRLADE--GCHVLCADIDGDAADAAATKI---GCG-AAACRVD-VSDEQQIIAMVDACVAAFGGVDKLVANA 111 (277)
T ss_dssp HHHHHHHHHT--TCEEEEEESSHHHHHHHHHHH---CSS-CEEEECC-TTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc---CCc-ceEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4567777775 567766554433222222222 433 3333322 457778888888877776 689888654
No 256
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=32.81 E-value=1.9e+02 Score=23.18 Aligned_cols=74 Identities=16% Similarity=0.174 Sum_probs=44.9
Q ss_pred HHHHHHHHHhhhhCCCceEEEEee-CCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 40 EIALEEALRIKESGLASEVVAVSM-GPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~-G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
--..+.+.+|+++ |.+|+++.- .+...++..+++-..|.+ +..+..| -.|...+..++.++.++. ++|+|+.-.
T Consensus 32 giG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~~~~d~vi~~A 107 (274)
T 1ja9_A 32 GIGRGIAIELGRR--GASVVVNYGSSSKAAEEVVAELKKLGAQ-GVAIQAD-ISKPSEVVALFDKAVSHFGGLDFVMSNS 107 (274)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC-TTSHHHHHHHHHHHHHHHSCEEEEECCC
T ss_pred hHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3445677788875 668877665 332233334444455655 4444433 457777777777777766 689887544
No 257
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=32.72 E-value=2e+02 Score=23.25 Aligned_cols=72 Identities=15% Similarity=0.148 Sum_probs=44.0
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHC-CCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAM-GADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~-GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.-.++..++..+++... |. ++..+..| -.|...+..++.++.++. +.|+++.-.
T Consensus 20 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~lv~~A 93 (263)
T 3ai3_A 20 GLAIAEGFAKE--GAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVD-VATPEGVDAVVESVRSSFGGADILVNNA 93 (263)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECC-TTSHHHHHHHHHHHHHHHSSCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 35677788875 678877665543333333333332 54 34444433 457777888887777776 689888654
No 258
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=32.66 E-value=2.1e+02 Score=23.49 Aligned_cols=70 Identities=13% Similarity=0.047 Sum_probs=43.8
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|++. |.+|+.+.-.. ..+.++++...+.+ +..+..| -.|...+...+.++.++. .+|+++.-.
T Consensus 41 G~~ia~~l~~~--G~~V~~~~r~~--~~~~~~~l~~~~~~-~~~~~~D-l~~~~~v~~~~~~~~~~~g~id~li~nA 111 (280)
T 3nrc_A 41 AYGIAKAMHRE--GAELAFTYVGQ--FKDRVEKLCAEFNP-AAVLPCD-VISDQEIKDLFVELGKVWDGLDAIVHSI 111 (280)
T ss_dssp HHHHHHHHHHT--TCEEEEEECTT--CHHHHHHHHGGGCC-SEEEECC-TTCHHHHHHHHHHHHHHCSSCCEEEECC
T ss_pred HHHHHHHHHHc--CCEEEEeeCch--HHHHHHHHHHhcCC-ceEEEee-cCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 35667777775 66777766665 24555555444333 3344333 457777788887777775 689888654
No 259
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=32.64 E-value=55 Score=27.12 Aligned_cols=43 Identities=19% Similarity=0.037 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHh--CCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 94 PLTVAKILKSLVEVE--KPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 94 ~~a~a~~La~~ik~~--~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
....++.|++.++.. ++|+|+.-. ..|-.++..+|..||.|++
T Consensus 54 ~~~~~~~la~~i~~~~~~~d~Ivgv~----~gG~~~a~~lA~~L~~p~~ 98 (236)
T 1qb7_A 54 LKAIRDFLVQRYRAMSPAPTHILGFD----ARGFLFGPMIAVELEIPFV 98 (236)
T ss_dssp HHHHHHHHHHHHHHCSSCCSEEEEET----TGGGGTHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHhhCCCCCEEEEEC----cCcHHHHHHHHHHhCCCEE
Confidence 345667777777766 789887644 3445789999999999974
No 260
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=32.28 E-value=1.7e+02 Score=22.47 Aligned_cols=60 Identities=23% Similarity=0.293 Sum_probs=40.8
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHH
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEV 107 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~ 107 (251)
.++...+|++..+...|+.++.... .+....++..|++..+. ..+++......|..+++.
T Consensus 66 g~~~~~~lr~~~~~~~ii~ls~~~~--~~~~~~~~~~Ga~~~l~----Kp~~~~~L~~~i~~~~~~ 125 (215)
T 1a04_A 66 GLETLDKLREKSLSGRIVVFSVSNH--EEDVVTALKRGADGYLL----KDMEPEDLLKALHQAAAG 125 (215)
T ss_dssp HHHHHHHHHHSCCCSEEEEEECCCC--HHHHHHHHHTTCSEEEE----TTCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCCcEEEEECCCC--HHHHHHHHHcCCcEEEe----CCCCHHHHHHHHHHHHcC
Confidence 4566677776544556766665543 46678899999997544 246777777787777664
No 261
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=32.23 E-value=1.6e+02 Score=23.73 Aligned_cols=69 Identities=10% Similarity=0.173 Sum_probs=41.2
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|++|+++ |.+|+.+.-..+..++..++ .|.. +..+..| -.|...+.+.+.++.++. +.|+++.-.
T Consensus 19 G~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~---~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 88 (247)
T 3rwb_A 19 GKAIAARLAAD--GATVIVSDINAEGAKAAAAS---IGKK-ARAIAAD-ISDPGSVKALFAEIQALTGGIDILVNNA 88 (247)
T ss_dssp HHHHHHHHHHT--TCEEEEECSCHHHHHHHHHH---HCTT-EEECCCC-TTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---hCCc-eEEEEcC-CCCHHHHHHHHHHHHHHCCCCCEEEECC
Confidence 34677788875 66777654443322222222 2543 4444433 457888888888877776 689888654
No 262
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=32.17 E-value=2.5e+02 Score=25.24 Aligned_cols=31 Identities=13% Similarity=-0.046 Sum_probs=21.5
Q ss_pred HHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 101 LKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 101 La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
+.+.+++.+||+++.|.. ......++|+|..
T Consensus 369 ~~~~i~~~~pDliig~~~---------~~~p~~~~G~P~~ 399 (437)
T 3aek_A 369 QLDRHEAINPDLTVCGLG---------LANPLEAKGHATK 399 (437)
T ss_dssp HHHHHHHHCCSEEEECHH---------HHHHHHTTTCCEE
T ss_pred HHHHHhccCCCEEEeCCc---------cccHHHHCCCCEE
Confidence 347788889999997752 2234566898864
No 263
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=32.12 E-value=82 Score=28.38 Aligned_cols=6 Identities=0% Similarity=0.274 Sum_probs=3.8
Q ss_pred CCCEEE
Q 025565 109 KPGLII 114 (251)
Q Consensus 109 ~~dlIl 114 (251)
++|+|+
T Consensus 314 g~Dvvi 319 (456)
T 3krt_A 314 DIDIVF 319 (456)
T ss_dssp CEEEEE
T ss_pred CCcEEE
Confidence 566666
No 264
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=32.04 E-value=1.3e+02 Score=26.58 Aligned_cols=94 Identities=11% Similarity=0.081 Sum_probs=58.6
Q ss_pred ceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCC----C------CCH----HHHHHHHHHHHHHh-------------
Q 025565 56 SEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG----Q------LYP----LTVAKILKSLVEVE------------- 108 (251)
Q Consensus 56 ~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~----~------~d~----~a~a~~La~~ik~~------------- 108 (251)
.+|..+-.|+- ....++.+...|+-++.+++.|. + +.. ..-+.++++.+++.
T Consensus 35 ~~VlIvGaGGl-Gs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~~i 113 (340)
T 3rui_A 35 TKVLLLGAGTL-GCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI 113 (340)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred CEEEEECCCHH-HHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence 47777777764 35678888899999999998653 1 110 01233333333332
Q ss_pred -------------------------CCCEEEEcceeecCCcCcHHHHHHHHcCCCcccceeeEEEecCCCeEEE
Q 025565 109 -------------------------KPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMV 157 (251)
Q Consensus 109 -------------------------~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~l~~ 157 (251)
++|+|+...-+ ..++....+.+..++.|+++.. +.+ +|.+.+
T Consensus 114 ~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn--~~tR~lin~~c~~~~~plI~aa--~G~---~G~l~v 180 (340)
T 3rui_A 114 PMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS--RESRWLPSLLSNIENKTVINAA--LGF---DSYLVM 180 (340)
T ss_dssp CCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS--TGGGHHHHHHHHHTTCEEEEEE--ECS---SEEEEE
T ss_pred cccCcccchhhhhcCCHHHHHhhhccCCEEEecCCC--HHHHHHHHHHHHHcCCcEEEee--ecc---eEEEEE
Confidence 36777765432 3567888899999999999743 443 355544
No 265
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=31.86 E-value=1.2e+02 Score=24.35 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=40.4
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCC------CEEEEEeeCCCCCHHHHHHHHHHHHHHhC-C-CE
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGA------DRGVHVEAAGQLYPLTVAKILKSLVEVEK-P-GL 112 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~Ga------D~vi~v~~~~~~d~~a~a~~La~~ik~~~-~-dl 112 (251)
-..+.|.+|+++ |.+|+++.-.+...++..+++-+.|. .++..+..| -.|...+..++.++.++.+ . |+
T Consensus 19 iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~g~i~d~ 95 (264)
T 2pd6_A 19 IGRAVSVRLAGE--GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQAD-VSEARAARCLLEQVQACFSRPPSV 95 (264)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTC------------CCEEEECC-TTSHHHHHHHHHHHHHHHSSCCSE
T ss_pred HHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEec-CCCHHHHHHHHHHHHHHhCCCCeE
Confidence 345667778875 66887776554333333333323331 234444433 4577777777777766664 4 98
Q ss_pred EEEcc
Q 025565 113 IILGK 117 (251)
Q Consensus 113 Il~G~ 117 (251)
|+.-.
T Consensus 96 vi~~A 100 (264)
T 2pd6_A 96 VVSCA 100 (264)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 88644
No 266
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=31.74 E-value=2e+02 Score=23.94 Aligned_cols=74 Identities=9% Similarity=0.023 Sum_probs=43.1
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCc-h-hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPA-Q-CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~-~-~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
--.+.|++|+++ |.+|+.+..... . .+......-..|. ++..+..| -.|...+..++.++.++. +.|+++.-.
T Consensus 61 IG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lv~nA 136 (294)
T 3r3s_A 61 IGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPGD-LSDESFARSLVHKAREALGGLDILALVA 136 (294)
T ss_dssp HHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTC-CEEECCCC-TTSHHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCC-cEEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345677788875 667766555422 1 2222233334554 44444433 457777777777777776 689888655
Q ss_pred e
Q 025565 118 Q 118 (251)
Q Consensus 118 ~ 118 (251)
.
T Consensus 137 g 137 (294)
T 3r3s_A 137 G 137 (294)
T ss_dssp C
T ss_pred C
Confidence 3
No 267
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=31.73 E-value=48 Score=26.71 Aligned_cols=41 Identities=12% Similarity=-0.055 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHH--hCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 96 TVAKILKSLVEV--EKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 96 a~a~~La~~ik~--~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
.+++.+++.+++ .++|+|+.-... +-.++..+|..|+.|++
T Consensus 47 ~l~~~la~~i~~~~~~~d~Iv~v~~~----g~~~a~~la~~l~~p~~ 89 (205)
T 2wns_A 47 QVADILFQTAQNAGISFDTVCGVPYT----ALPLATVICSTNQIPML 89 (205)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEECTTT----THHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCc----hHHHHHHHHHHHCcCEE
Confidence 356677777766 478988765543 45688999999999974
No 268
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=31.64 E-value=1.9e+02 Score=23.95 Aligned_cols=72 Identities=10% Similarity=-0.044 Sum_probs=41.2
Q ss_pred HHHHHHHhhhhCCCceEEEEe-eCCchhHHHHHHHH-HCCCCEEEEEeeCCCCCHH-----------------HHHHHHH
Q 025565 42 ALEEALRIKESGLASEVVAVS-MGPAQCVDTLRTGL-AMGADRGVHVEAAGQLYPL-----------------TVAKILK 102 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~-~G~~~~~~~l~~~l-a~GaD~vi~v~~~~~~d~~-----------------a~a~~La 102 (251)
-.+.|.+|+++ |.+|+.+. -.++..++..+++- ..|.. +..+..| -.|.. .+..++.
T Consensus 22 G~aia~~la~~--G~~V~~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D-l~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 97 (291)
T 1e7w_A 22 GRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNS-AITVQAD-LSNVATAPVSGADGSAPVTLFTRCAELVA 97 (291)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTC-EEEEECC-CSSSCBCCCC----CCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHHhhhcCCe-eEEEEee-cCCcccccccccccccccchHHHHHHHHH
Confidence 35677788875 67877766 54433333334443 45643 4444433 22333 5566666
Q ss_pred HHHHHh-CCCEEEEcc
Q 025565 103 SLVEVE-KPGLIILGK 117 (251)
Q Consensus 103 ~~ik~~-~~dlIl~G~ 117 (251)
++.++. +.|+++.-.
T Consensus 98 ~~~~~~g~iD~lvnnA 113 (291)
T 1e7w_A 98 ACYTHWGRCDVLVNNA 113 (291)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 666665 689888755
No 269
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=31.57 E-value=1.9e+02 Score=24.70 Aligned_cols=61 Identities=15% Similarity=0.041 Sum_probs=41.1
Q ss_pred HCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-----CCCEEEEcceeecCCcCcHHHHHHHHcCCC
Q 025565 77 AMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-----KPGLIILGKQAIDDDCNQTGQMVAGLLSWP 138 (251)
Q Consensus 77 a~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-----~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p 138 (251)
..|..+-.....+ ....+-...+..+++++- +.|.|++|.++.|......+.+++.+||+|
T Consensus 50 rtgi~~r~~~~~~-~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~ 115 (333)
T 4dfe_A 50 RTGIHARYFAEPD-VTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIR 115 (333)
T ss_dssp HHCCSEEEECCTT-CCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCC
T ss_pred hcCceEEEEcCCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCC
Confidence 3488887765432 222333344444555542 468999998887776678899999999995
No 270
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=31.54 E-value=49 Score=28.51 Aligned_cols=49 Identities=12% Similarity=-0.052 Sum_probs=27.0
Q ss_pred CCceEEEEeeCCchh-HHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEE
Q 025565 54 LASEVVAVSMGPAQC-VDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLII 114 (251)
Q Consensus 54 ~g~~V~al~~G~~~~-~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl 114 (251)
.|.+|... |.... .-+++-|.++|+ +++.+.... .-. +.+++.+.|.++
T Consensus 176 ~g~~VlV~--GaG~vG~~a~qla~~~Ga-~Vi~~~~~~--~~~-------~~~~~lGa~~v~ 225 (348)
T 3two_A 176 KGTKVGVA--GFGGLGSMAVKYAVAMGA-EVSVFARNE--HKK-------QDALSMGVKHFY 225 (348)
T ss_dssp TTCEEEEE--SCSHHHHHHHHHHHHTTC-EEEEECSSS--TTH-------HHHHHTTCSEEE
T ss_pred CCCEEEEE--CCcHHHHHHHHHHHHCCC-eEEEEeCCH--HHH-------HHHHhcCCCeec
Confidence 45555543 54322 334566777899 787765321 111 134567888777
No 271
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=31.43 E-value=1.4e+02 Score=21.13 Aligned_cols=63 Identities=11% Similarity=0.064 Sum_probs=41.5
Q ss_pred HHHHHHHHHhhh--hCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCC-CHHHHHHHHHHHHHHh
Q 025565 40 EIALEEALRIKE--SGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQL-YPLTVAKILKSLVEVE 108 (251)
Q Consensus 40 ~~Ale~A~~lae--~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~-d~~a~a~~La~~ik~~ 108 (251)
...++...+|++ ...+..+++++-.. ..+...+++..|++..+. ... +...+..+|..+++..
T Consensus 64 ~~g~~~~~~lr~~~~~~~~pii~~s~~~--~~~~~~~~~~~ga~~~l~----Kp~~~~~~l~~~i~~~l~~~ 129 (144)
T 3kht_A 64 ANGFEVMSAVRKPGANQHTPIVILTDNV--SDDRAKQCMAAGASSVVD----KSSNNVTDFYGRIYAIFSYW 129 (144)
T ss_dssp GCHHHHHHHHHSSSTTTTCCEEEEETTC--CHHHHHHHHHTTCSEEEE----CCTTSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcccccCCCEEEEeCCC--CHHHHHHHHHcCCCEEEE----CCCCcHHHHHHHHHHHHHHH
Confidence 345666667766 22445566655443 256778899999997554 245 7888888888887764
No 272
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=31.43 E-value=1e+02 Score=26.31 Aligned_cols=16 Identities=25% Similarity=0.281 Sum_probs=9.0
Q ss_pred HHHHHHCCCCEEEEEe
Q 025565 72 LRTGLAMGADRGVHVE 87 (251)
Q Consensus 72 l~~~la~GaD~vi~v~ 87 (251)
++-|.++|..+++.++
T Consensus 188 ~qla~~~g~~~Vi~~~ 203 (345)
T 3jv7_A 188 IQILRAVSAARVIAVD 203 (345)
T ss_dssp HHHHHHHCCCEEEEEE
T ss_pred HHHHHHcCCCEEEEEc
Confidence 3444455666666664
No 273
>2fts_A Gephyrin; gephyrin, neuroreceptor anchoring, structu protein; 2.41A {Rattus norvegicus} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 2fu3_A 1t3e_A
Probab=31.39 E-value=2.5e+02 Score=25.32 Aligned_cols=103 Identities=16% Similarity=-0.018 Sum_probs=58.9
Q ss_pred ccCCCHHhHHHHHHHHHhhhh--CCCceEEEEeeCCchh---------------HHHHHH-HHHCCCCEEEEEeeCCCCC
Q 025565 32 KMSMNPFCEIALEEALRIKES--GLASEVVAVSMGPAQC---------------VDTLRT-GLAMGADRGVHVEAAGQLY 93 (251)
Q Consensus 32 ~~~in~~d~~Ale~A~~lae~--~~g~~V~al~~G~~~~---------------~~~l~~-~la~GaD~vi~v~~~~~~d 93 (251)
...|+|.+.-+|. +.-+.+- +.--+|..++.|++-. ...+.. +-.+|++-..+.--+ -|
T Consensus 157 G~~l~p~~iglLa-s~G~~~v~V~~~prv~IistGdEl~~~g~~~~~G~i~dsN~~~L~~~l~~~G~~v~~~~iv~--Dd 233 (419)
T 2fts_A 157 GTHMGPSEIGLLA-TVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVG--DN 233 (419)
T ss_dssp TCBCCHHHHHHHH-HHTCCEEEEECCCCEEEEEECTTEECTTSCCCTTCEECCHHHHHHHHHHTTTCCEEEEEEEC--SS
T ss_pred CCCcCHHHHHHHH-hCCCCeeEecCCCEEEEEEechhccCCCCCCCCCcEecCchHHHHHHHHHCCCEEEEEeecC--CC
Confidence 5689999976663 3333321 1123677888887521 234554 445798755432211 25
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCc
Q 025565 94 PLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQ 139 (251)
Q Consensus 94 ~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~ 139 (251)
.+.+.++|.+++++ +|+|++...++-++.-.+...++..+|..+
T Consensus 234 ~~~i~~~l~~a~~~--~DlVittGG~s~g~~D~t~~al~~~lg~~~ 277 (419)
T 2fts_A 234 PDDLLNALNEGISR--ADVIITSGGVSMGEKDYLKQVLDIDLHAQI 277 (419)
T ss_dssp HHHHHHHHHHHHHH--CSEEEEESCCSSSCCHHHHHHHHTTTCCEE
T ss_pred HHHHHHHHHHHHhc--CCEEEEcCCCcCCCcccHHHHHHHHcCCce
Confidence 77888888888764 897766544433332344555546776543
No 274
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=31.26 E-value=1.8e+02 Score=23.41 Aligned_cols=69 Identities=10% Similarity=0.051 Sum_probs=41.1
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-.+.|.+|+++ |.+|+++.-.++..++..+++ |. ++..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 19 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lv~~A 88 (253)
T 1hxh_A 19 GLEVVKLLLGE--GAKVAFSDINEAAGQQLAAEL---GE-RSMFVRHD-VSSEADWTLVMAAVQRRLGTLNVLVNNA 88 (253)
T ss_dssp HHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHH---CT-TEEEECCC-TTCHHHHHHHHHHHHHHHCSCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc---CC-ceEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 34667788875 667776654433222222222 43 34444433 457777888887777776 589888654
No 275
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=31.24 E-value=1.5e+02 Score=25.00 Aligned_cols=34 Identities=9% Similarity=-0.192 Sum_probs=17.6
Q ss_pred HHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 106 EVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 106 k~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
++.++|+|+.......+..+.+ ..+.+.+|+|++
T Consensus 62 ~~~~~D~v~~~~hg~~ge~~~~-~~~le~~gip~~ 95 (317)
T 4eg0_A 62 KDEGFVRAFNALHGGYGENGQI-QGALDFYGIRYT 95 (317)
T ss_dssp HHTTCCEEEECCCSGGGTSSHH-HHHHHHHTCEES
T ss_pred hhcCCCEEEEcCCCCCCchHHH-HHHHHHcCCCee
Confidence 3456777775444333333333 445556666655
No 276
>4f06_A Extracellular ligand-binding receptor; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: MSE PHB; 1.30A {Rhodopseudomonas palustris} PDB: 4evs_A*
Probab=31.19 E-value=40 Score=29.09 Aligned_cols=52 Identities=10% Similarity=-0.072 Sum_probs=28.6
Q ss_pred eCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccc
Q 025565 88 AAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTF 142 (251)
Q Consensus 88 ~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 142 (251)
|+...|+........+++.+.+.+.|+-+.+|.. ..-...+++..++|+++.
T Consensus 51 D~~~~~p~~a~~~a~~Li~~d~V~aiiG~~~S~~---~~a~~~~~~~~~vp~i~~ 102 (371)
T 4f06_A 51 DEVSPNPAQSKALAQELIVKEKVQYLAGLYFTPN---AMAVAPLLQEAKVPMVVM 102 (371)
T ss_dssp ECCSSCHHHHHHHHHHHHHTSCCSEEEECCSHHH---HHHHGGGHHHHTCCEEES
T ss_pred cCCCCCHHHHHHHHHHHHhcCCCEEEEecccccc---hHHHHHHHHhhcCCcccc
Confidence 3334566655555556666666777665554411 123334566677777654
No 277
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=31.12 E-value=2.2e+02 Score=23.32 Aligned_cols=74 Identities=18% Similarity=0.162 Sum_probs=46.3
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeC----------------CchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHH
Q 025565 41 IALEEALRIKESGLASEVVAVSMG----------------PAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSL 104 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G----------------~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ 104 (251)
-..+.|++|++. |.+|+++... .+..++..++....|. ++..+..| -.|...+.+.+.++
T Consensus 23 IG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~ 98 (286)
T 3uve_A 23 QGRSHAVRLAQE--GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR-RIVTAEVD-VRDYDALKAAVDSG 98 (286)
T ss_dssp HHHHHHHHHHHT--TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC-CEEEEECC-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC--CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC-ceEEEEcC-CCCHHHHHHHHHHH
Confidence 345778888885 6788877543 1222333334444554 45555533 56788888888888
Q ss_pred HHHh-CCCEEEEcce
Q 025565 105 VEVE-KPGLIILGKQ 118 (251)
Q Consensus 105 ik~~-~~dlIl~G~~ 118 (251)
.++. +.|+++.-..
T Consensus 99 ~~~~g~id~lv~nAg 113 (286)
T 3uve_A 99 VEQLGRLDIIVANAG 113 (286)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCCEEEECCc
Confidence 8776 6898886543
No 278
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=31.08 E-value=13 Score=28.97 Aligned_cols=43 Identities=14% Similarity=0.156 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhCCCEEEEc-----ceeecCCc---CcHHHHHHHHcCCCcc
Q 025565 98 AKILKSLVEVEKPGLIILG-----KQAIDDDC---NQTGQMVAGLLSWPQG 140 (251)
Q Consensus 98 a~~La~~ik~~~~dlIl~G-----~~s~d~~~---~~v~~~lA~~Lg~p~v 140 (251)
...|.+++++++|+.|++| +.+.+..+ ..++-+|+.+.++|+.
T Consensus 44 ~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~ 94 (150)
T 1vhx_A 44 LSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVV 94 (150)
T ss_dssp HHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEE
T ss_pred HHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEE
Confidence 4688899999999999999 43322222 2334466776677653
No 279
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=31.00 E-value=1.9e+02 Score=25.36 Aligned_cols=91 Identities=12% Similarity=0.148 Sum_probs=46.2
Q ss_pred HHHHHhhhhCCCceEEEEeeCCchhHHHHHHH-HHCCCCEEEEEee--CCCCCHHHHHH---HHHHHHHHhCCCEEEEcc
Q 025565 44 EEALRIKESGLASEVVAVSMGPAQCVDTLRTG-LAMGADRGVHVEA--AGQLYPLTVAK---ILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 44 e~A~~lae~~~g~~V~al~~G~~~~~~~l~~~-la~GaD~vi~v~~--~~~~d~~a~a~---~La~~ik~~~~dlIl~G~ 117 (251)
-....|++. ++.++..+.-|... +...+. -.+|.+.-+.+.- ....-...++. .+.+++++.+||+|++-.
T Consensus 43 ~li~~l~~~-~~~~~~~~~tG~h~--~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~g 119 (396)
T 3dzc_A 43 PLVQQLCQD-NRFVAKVCVTGQHR--EMLDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLGMQQVLSSEQPDVVLVHG 119 (396)
T ss_dssp HHHHHHHHC-TTEEEEEEECCSSS--HHHHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHHHHHHHHHHCCSEEEEET
T ss_pred HHHHHHHhC-CCCcEEEEEecccH--HHHHHHHHhcCCCCceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 334455554 46677666667653 122222 2466532233331 11112223344 445667788999998632
Q ss_pred eeecCCcCcHHHHHHHHcCCCcc
Q 025565 118 QAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 118 ~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
|..+.-.+...|.++|+|++
T Consensus 120 ---~~~~~~~~~~aa~~~~IPv~ 139 (396)
T 3dzc_A 120 ---DTATTFAASLAAYYQQIPVG 139 (396)
T ss_dssp ---TSHHHHHHHHHHHTTTCCEE
T ss_pred ---CchhHHHHHHHHHHhCCCEE
Confidence 11111223567778899975
No 280
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=31.00 E-value=60 Score=27.46 Aligned_cols=63 Identities=13% Similarity=0.059 Sum_probs=36.6
Q ss_pred HHHHHhhhhCCC-ceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 44 EEALRIKESGLA-SEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 44 e~A~~lae~~~g-~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
..++.+++. .| .+|+++...+.. .. .+-+|+.+.+. ..+...+...|.+++++.++|+|+.+.
T Consensus 17 ~l~~~l~~~-~~~~~v~~~d~~~~~--~~-----~~~~d~~~~~~---~~~~~~~~~~l~~~~~~~~~d~vi~~~ 80 (331)
T 2pn1_A 17 KLVEYFVKE-FKTGRVSTADCSPLA--SA-----LYMADQHYIVP---KIDEVEYIDHLLTLCQDEGVTALLTLI 80 (331)
T ss_dssp HHHHHHHHH-CCSSEEEEEESCTTC--GG-----GGGSSSEEECC---CTTSTTHHHHHHHHHHHHTCCEEEESS
T ss_pred HHHHHHHHh-cCCCEEEEEeCCCcc--hh-----HHhhhceecCC---CCCChhHHHHHHHHHHHcCCCEEEeCC
Confidence 345566665 34 566666544321 11 11267766654 122234667788888888999998754
No 281
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=30.67 E-value=1.3e+02 Score=20.44 Aligned_cols=57 Identities=12% Similarity=0.146 Sum_probs=32.4
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHH
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKS 103 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~ 103 (251)
..++...+|++..++..++.++-... .+....++..|++..+. . .++.......|..
T Consensus 61 ~g~~~~~~l~~~~~~~~ii~~s~~~~--~~~~~~~~~~g~~~~l~-K---P~~~~~l~~~i~~ 117 (120)
T 1tmy_A 61 NGIDAIKEIMKIDPNAKIIVCSAMGQ--QAMVIEAIKAGAKDFIV-K---PFQPSRVVEALNK 117 (120)
T ss_dssp CHHHHHHHHHHHCTTCCEEEEECTTC--HHHHHHHHHTTCCEEEE-S---SCCHHHHHHHHHH
T ss_pred cHHHHHHHHHhhCCCCeEEEEeCCCC--HHHHHHHHHhCcceeEe-C---CCCHHHHHHHHHH
Confidence 34556666666534556665554433 45567788889886443 2 3455555555443
No 282
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=30.66 E-value=46 Score=28.76 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=18.8
Q ss_pred CCceEEEEeeCCchh-HHHHHHHHHCCCCEEEEEe
Q 025565 54 LASEVVAVSMGPAQC-VDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 54 ~g~~V~al~~G~~~~-~~~l~~~la~GaD~vi~v~ 87 (251)
.|.+|... |.... .-+++-|.++|+.+++.++
T Consensus 166 ~g~~VlV~--GaG~vG~~a~qla~~~Ga~~Vi~~~ 198 (352)
T 3fpc_A 166 LGDTVCVI--GIGPVGLMSVAGANHLGAGRIFAVG 198 (352)
T ss_dssp TTCCEEEE--CCSHHHHHHHHHHHTTTCSSEEEEC
T ss_pred CCCEEEEE--CCCHHHHHHHHHHHHcCCcEEEEEC
Confidence 45555444 43222 2345666778988888875
No 283
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=30.60 E-value=1.7e+02 Score=23.13 Aligned_cols=72 Identities=10% Similarity=0.039 Sum_probs=42.0
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.+.+|+++ |.+|+++.-.++..++..++ +... .++..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 18 iG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~-~~~~-~~~~~~~~D-~~~~~~~~~~~~~~~~~~~~id~li~~A 90 (251)
T 1zk4_A 18 IGLAIATKFVEE--GAKVMITGRHSDVGEKAAKS-VGTP-DQIQFFQHD-SSDEDGWTKLFDATEKAFGPVSTLVNNA 90 (251)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHH-HCCT-TTEEEEECC-TTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH-hhcc-CceEEEECC-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 345677788875 67877766554332222222 2221 345555433 457777777777777766 589888654
No 284
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=30.59 E-value=1.3e+02 Score=20.65 Aligned_cols=59 Identities=8% Similarity=0.074 Sum_probs=36.1
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHH
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVE 106 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik 106 (251)
.++...+|++..+...++.++-... .+...+++..|++..+. . .++......+|..+.+
T Consensus 62 g~~~~~~l~~~~~~~~ii~~s~~~~--~~~~~~~~~~ga~~~l~-K---p~~~~~l~~~i~~~~~ 120 (126)
T 1dbw_A 62 GVELLRNLGDLKINIPSIVITGHGD--VPMAVEAMKAGAVDFIE-K---PFEDTVIIEAIERASE 120 (126)
T ss_dssp HHHHHHHHHHTTCCCCEEEEECTTC--HHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCC--HHHHHHHHHhCHHHhee-C---CCCHHHHHHHHHHHHH
Confidence 3555666766534556666654432 45677888999985433 2 4567766666666554
No 285
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=30.59 E-value=91 Score=27.15 Aligned_cols=15 Identities=13% Similarity=-0.004 Sum_probs=8.2
Q ss_pred HHHHHHHCCCCEEEEE
Q 025565 71 TLRTGLAMGADRGVHV 86 (251)
Q Consensus 71 ~l~~~la~GaD~vi~v 86 (251)
+++-|..+|+ +++.+
T Consensus 181 a~qla~~~Ga-~Vi~~ 195 (371)
T 3gqv_A 181 TMQMLRLSGY-IPIAT 195 (371)
T ss_dssp HHHHHHHTTC-EEEEE
T ss_pred HHHHHHHCCC-EEEEE
Confidence 3455556677 45544
No 286
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=30.54 E-value=1.6e+02 Score=21.56 Aligned_cols=74 Identities=9% Similarity=0.181 Sum_probs=43.1
Q ss_pred HHHHHHHhhhhCCCceEEE-EeeCCchhHHHHHHHHHCCCCEEEEEeeCC-CCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVA-VSMGPAQCVDTLRTGLAMGADRGVHVEAAG-QLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~a-l~~G~~~~~~~l~~~la~GaD~vi~v~~~~-~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
.|+.+.+..+. .|.++.. +..|. .++..++.+-..++|-++.=.... ..........-..++++-...++++..
T Consensus 84 ~l~~~~~~~~~-~g~~~~~~v~~G~-~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~~~pVlvv~~ 159 (162)
T 1mjh_A 84 KMENIKKELED-VGFKVKDIIVVGI-PHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVKR 159 (162)
T ss_dssp HHHHHHHHHHH-TTCEEEEEEEEEC-HHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHCCSCEEEECC
T ss_pred HHHHHHHHHHH-cCCceEEEEcCCC-HHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhCCCCEEEEeC
Confidence 35555554444 4656543 44564 357777888888999877765332 222222334445566666777777754
No 287
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=30.53 E-value=1.2e+02 Score=26.08 Aligned_cols=16 Identities=25% Similarity=0.119 Sum_probs=9.7
Q ss_pred HHHHHHHCCCCEEEEEe
Q 025565 71 TLRTGLAMGADRGVHVE 87 (251)
Q Consensus 71 ~l~~~la~GaD~vi~v~ 87 (251)
+++-|.++|+. ++.+.
T Consensus 184 a~qla~~~Ga~-Vi~~~ 199 (352)
T 1e3j_A 184 SVLAAKAYGAF-VVCTA 199 (352)
T ss_dssp HHHHHHHTTCE-EEEEE
T ss_pred HHHHHHHcCCE-EEEEc
Confidence 44556667876 65554
No 288
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=30.51 E-value=1.9e+02 Score=23.03 Aligned_cols=73 Identities=12% Similarity=0.065 Sum_probs=43.6
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHH-CCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLA-MGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la-~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+++.-.+....+.++++.. +|.. +..+..| -.|...+..++.++.++. .+|+++.-.
T Consensus 26 iG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D-l~~~~~~~~~~~~~~~~~~~id~li~~A 100 (265)
T 1h5q_A 26 IGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVK-TKAYQCD-VSNTDIVTKTIQQIDADLGPISGLIANA 100 (265)
T ss_dssp HHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCC-EEEEECC-TTCHHHHHHHHHHHHHHSCSEEEEEECC
T ss_pred HHHHHHHHHHHC--CCeEEEEeCcchhhHHHHHHHHHhcCCe-eEEEEee-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 345677788875 67888776544443444444332 3433 4444433 457777777777776665 478777644
No 289
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=30.45 E-value=1.5e+02 Score=21.23 Aligned_cols=60 Identities=13% Similarity=0.079 Sum_probs=39.2
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHH
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEV 107 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~ 107 (251)
.++...+|++..+...|+.++-.. ..+...+++..|++..+. . ..+...+..+|..+++.
T Consensus 76 g~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~l~-K---p~~~~~l~~~i~~~~~~ 135 (152)
T 3eul_A 76 GAQVAAAVRSYELPTRVLLISAHD--EPAIVYQALQQGAAGFLL-K---DSTRTEIVKAVLDCAKG 135 (152)
T ss_dssp HHHHHHHHHHTTCSCEEEEEESCC--CHHHHHHHHHTTCSEEEE-T---TCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCeEEEEEccC--CHHHHHHHHHcCCCEEEe-c---CCCHHHHHHHHHHHHcC
Confidence 455566666654455555555443 256678899999997544 2 45778888888777764
No 290
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=30.40 E-value=2.3e+02 Score=23.26 Aligned_cols=75 Identities=12% Similarity=0.171 Sum_probs=44.6
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
.--..+.|.+|++. |.+|+++.-.++..++..+++...|.+ +..+..| -.|...+..++.++.++. ++|+|+.-.
T Consensus 54 ggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-l~d~~~v~~~~~~~~~~~~~id~li~~A 129 (285)
T 2c07_A 54 RGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIKSFGYE-SSGYAGD-VSKKEEISEVINKILTEHKNVDILVNNA 129 (285)
T ss_dssp SHHHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHHHTTTCC-EEEEECC-TTCHHHHHHHHHHHHHHCSCCCEEEECC
T ss_pred cHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHHHhcCCc-eeEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 33445677788875 667777443333333334444445654 4444433 457777778777777765 689888754
No 291
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=30.38 E-value=2e+02 Score=24.51 Aligned_cols=73 Identities=10% Similarity=-0.034 Sum_probs=39.7
Q ss_pred HHHHHHHHhhhhCCCceEEEEe-eCCchhHHHHHHHH-HCCCCEEEEEeeCCCCCHH-----------------HHHHHH
Q 025565 41 IALEEALRIKESGLASEVVAVS-MGPAQCVDTLRTGL-AMGADRGVHVEAAGQLYPL-----------------TVAKIL 101 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~-~G~~~~~~~l~~~l-a~GaD~vi~v~~~~~~d~~-----------------a~a~~L 101 (251)
-..+.|.+|+++ |.+|+.+. -.++..++..+++- ..|. ++..+..| -.|.. .+..++
T Consensus 58 IG~aia~~La~~--G~~Vv~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D-l~d~~~~~~~~~~~~~~~~~~~~v~~~~ 133 (328)
T 2qhx_A 58 LGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPN-SAITVQAD-LSNVATAPVSGADGSAPVTLFTRCAELV 133 (328)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECC-CSSSCBCC-------CCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhhcCC-eEEEEEee-CCCchhccccccccccccccHHHHHHHH
Confidence 345677778775 66777665 44333333333332 4553 34444433 22333 555666
Q ss_pred HHHHHHh-CCCEEEEcc
Q 025565 102 KSLVEVE-KPGLIILGK 117 (251)
Q Consensus 102 a~~ik~~-~~dlIl~G~ 117 (251)
.++.++. ++|+++.-.
T Consensus 134 ~~~~~~~g~iD~lVnnA 150 (328)
T 2qhx_A 134 AACYTHWGRCDVLVNNA 150 (328)
T ss_dssp HHHHHHHSCCCEEEECC
T ss_pred HHHHHhcCCCCEEEECC
Confidence 6666665 689888655
No 292
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=30.34 E-value=1.2e+02 Score=27.01 Aligned_cols=30 Identities=7% Similarity=0.081 Sum_probs=26.0
Q ss_pred EEEeeCCchhHHHHHHHHHCCCCEEEEEee
Q 025565 59 VAVSMGPAQCVDTLRTGLAMGADRGVHVEA 88 (251)
Q Consensus 59 ~al~~G~~~~~~~l~~~la~GaD~vi~v~~ 88 (251)
.+.-.|.+..+++++++.+.|+++++.+.-
T Consensus 97 ~amry~~P~i~~~l~~l~~~G~~~ivvlPl 126 (359)
T 3hcn_A 97 IGFRYVHPLTEEAIEEMERDGLERAIAFTQ 126 (359)
T ss_dssp EEESSSSSBHHHHHHHHHHTTCSEEEEEES
T ss_pred EEEeeCCCCHHHHHHHHHhcCCCeEEEEEC
Confidence 466778888999999999999999999974
No 293
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=30.32 E-value=72 Score=24.32 Aligned_cols=43 Identities=19% Similarity=0.275 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhCCCEEEEccee-ecC-Cc------CcHHHHHHHHcCCCcc
Q 025565 98 AKILKSLVEVEKPGLIILGKQA-IDD-DC------NQTGQMVAGLLSWPQG 140 (251)
Q Consensus 98 a~~La~~ik~~~~dlIl~G~~s-~d~-~~------~~v~~~lA~~Lg~p~v 140 (251)
...|.+++++.+++.|++|--. .|+ .+ ...+-+|+.++++|+.
T Consensus 42 ~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~ 92 (138)
T 1nu0_A 42 WNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVK 92 (138)
T ss_dssp HHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEE
Confidence 4688889999999999999221 122 22 4678888888877753
No 294
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=30.26 E-value=80 Score=28.18 Aligned_cols=89 Identities=16% Similarity=0.084 Sum_probs=54.5
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCc-----------hhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHH
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPA-----------QCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEV 107 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~-----------~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~ 107 (251)
-.+.++.|++ . +..+++++ |+- .-.+-.+.+..+|+|-++.+.-.....+..+++-...++.+
T Consensus 68 Hq~lI~~a~~---~--~~~~~Vms-~~~~~vqrg~~~l~~~~~R~~~~~~~GvD~vielpF~~~~s~~~Fv~~~v~ll~~ 141 (357)
T 3gmi_A 68 HKYALEKGKE---H--GIFISVLP-GPLERSGRGIPYFLNRYIRAEMAIRAGADIVVEGPPMGIMGSGQYMRCLIKMFYS 141 (357)
T ss_dssp HHHHHHHHHT---S--SEEEEEEC-CTTSBCTTSSBCSSCHHHHHHHHHHHTCSEEEECCCGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---c--CCeEEEEc-CchHHhcCCCCcCCCHHHHHHHHHHCCCCEEEEcCchhhCCHHHHHHHHHHHHHH
Confidence 3566777766 2 43455544 321 12455677888999999988642234566666544456778
Q ss_pred hCCCEEEEcceeecCCcCcHHHHHHHHcCCC
Q 025565 108 EKPGLIILGKQAIDDDCNQTGQMVAGLLSWP 138 (251)
Q Consensus 108 ~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p 138 (251)
.+.+.|++|. +.+. + --.+|..+.-+
T Consensus 142 l~~~~iv~G~-~~~~---~-~~~~~~~i~~~ 167 (357)
T 3gmi_A 142 LGAEIIPRGY-IPEK---T-MEKVIDCINKG 167 (357)
T ss_dssp HTCCEEEEEE-CCCH---H-HHHHHHHHHTT
T ss_pred cCCCEEEECC-CCch---h-HHHHHHHHhcc
Confidence 8999999999 3221 1 44556666544
No 295
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=30.18 E-value=2e+02 Score=22.89 Aligned_cols=69 Identities=13% Similarity=0.028 Sum_probs=42.0
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+.+.-..+..++..++. |. ++..+..| -.|...+...+.++.++. ..|+++.-.
T Consensus 16 G~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lvnnA 85 (235)
T 3l6e_A 16 GRALTIGLVER--GHQVSMMGRRYQRLQQQELLL---GN-AVIGIVAD-LAHHEDVDVAFAAAVEWGGLPELVLHCA 85 (235)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH---GG-GEEEEECC-TTSHHHHHHHHHHHHHHHCSCSEEEEEC
T ss_pred HHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh---cC-CceEEECC-CCCHHHHHHHHHHHHHhcCCCcEEEECC
Confidence 34677888875 678777665544333322222 32 35555433 457778888887777776 589887544
No 296
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=30.18 E-value=32 Score=32.28 Aligned_cols=52 Identities=12% Similarity=0.079 Sum_probs=33.6
Q ss_pred CHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccceee
Q 025565 93 YPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASK 145 (251)
Q Consensus 93 d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 145 (251)
+...+. .+++.+++-+-=+|++|......+..+---++|+++|+|+++...+
T Consensus 193 ~~~~i~-~~~~~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~~ 244 (566)
T 1ozh_A 193 PDDAID-QVAKLIAQAKNPIFLLGLMASQPENSKALRRLLETSHIPVTSTYQA 244 (566)
T ss_dssp CHHHHH-HHHHHHHHCSSEEEEECGGGGSGGGHHHHHHHHHHHCCCEEECGGG
T ss_pred CHHHHH-HHHHHHHcCCCeEEEECCCcccccHHHHHHHHHHHHCCCEEEcccc
Confidence 444443 3444455433348888887644444566789999999999987654
No 297
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=30.13 E-value=70 Score=27.44 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=26.3
Q ss_pred HHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccc
Q 025565 101 LKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTF 142 (251)
Q Consensus 101 La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 142 (251)
+.+.++..+||+|+.... .-.++.+|..+|+|++..
T Consensus 120 l~~~~~~~~pD~Vv~d~~------~~~~~~~A~~~gip~~~~ 155 (400)
T 4amg_A 120 ALRTARSWRPDLVVHTPT------QGAGPLTAAALQLPCVEL 155 (400)
T ss_dssp HHHHHHHHCCSEEEECTT------CTHHHHHHHHTTCCEEEC
T ss_pred HHHHHHhcCCCEEEECcc------hHHHHHHHHHcCCCceee
Confidence 445667779999986432 236788999999997654
No 298
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=30.12 E-value=34 Score=30.04 Aligned_cols=33 Identities=18% Similarity=0.276 Sum_probs=19.0
Q ss_pred CCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEe
Q 025565 54 LASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 54 ~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~ 87 (251)
.|.+|.++-.|+- -.-+++-|.++|+.+++.++
T Consensus 193 ~g~~VlV~GaG~v-G~~a~q~a~~~Ga~~Vi~~~ 225 (378)
T 3uko_A 193 PGSNVAIFGLGTV-GLAVAEGAKTAGASRIIGID 225 (378)
T ss_dssp TTCCEEEECCSHH-HHHHHHHHHHHTCSCEEEEC
T ss_pred CCCEEEEECCCHH-HHHHHHHHHHcCCCeEEEEc
Confidence 4555544433321 13345666678998888876
No 299
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=30.11 E-value=2.4e+02 Score=23.43 Aligned_cols=70 Identities=10% Similarity=0.001 Sum_probs=40.4
Q ss_pred HHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 43 LEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
.+.|++|++. |.+|+.+.-.+ ...+.+++....+. ++..+..| -.|...+...+.++.++. +.|+++.-.
T Consensus 47 ~aia~~la~~--G~~V~~~~r~~-~~~~~~~~~~~~~~-~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lVnnA 117 (293)
T 3grk_A 47 WGIAKAAREA--GAELAFTYQGD-ALKKRVEPLAEELG-AFVAGHCD-VADAASIDAVFETLEKKWGKLDFLVHAI 117 (293)
T ss_dssp HHHHHHHHHT--TCEEEEEECSH-HHHHHHHHHHHHHT-CEEEEECC-TTCHHHHHHHHHHHHHHTSCCSEEEECC
T ss_pred HHHHHHHHHC--CCEEEEEcCCH-HHHHHHHHHHHhcC-CceEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 4566777775 56766554432 22333444333222 24444433 457788888888877776 689888654
No 300
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=30.05 E-value=37 Score=28.78 Aligned_cols=65 Identities=15% Similarity=0.084 Sum_probs=38.6
Q ss_pred EEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCC-cCcHHHHHHHHc
Q 025565 59 VAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDD-CNQTGQMVAGLL 135 (251)
Q Consensus 59 ~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~-~~~v~~~lA~~L 135 (251)
+|++-|.. ...++.+.+.|||- .|+.+-.+.. +..+++.+..+|.+|+. +... -..++..|.+++
T Consensus 180 VAv~~GsG--~~~~~~a~~~gaD~--~ITGd~~~h~-------~~~A~e~gi~~i~~GH~-tE~~~~~~l~~~L~~~~ 245 (267)
T 2fyw_A 180 VAICGGSG--QSFYKDALAKGADV--YITGDIYYHT-------AQDMLSDGLLALDPGHY-IEVIFVEKIAALLSQWK 245 (267)
T ss_dssp EEEESSSC--GGGHHHHHHTTCSE--EEESCCCHHH-------HHHHHHTTCEEEECCGG-GGGHHHHHHHHHHHHHH
T ss_pred EEEEcCCC--HHHHHHHHHcCCCE--EEEccCcHHH-------HHHHHHCCCeEEECCcH-HHHHHHHHHHHHHHHHh
Confidence 46777764 35788999999993 3343322211 22334568999999998 5532 223445555555
No 301
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=29.83 E-value=77 Score=27.02 Aligned_cols=50 Identities=12% Similarity=-0.006 Sum_probs=26.6
Q ss_pred HHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHc
Q 025565 70 DTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLL 135 (251)
Q Consensus 70 ~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~L 135 (251)
.+++-+.++|+ +++.+... ... + +.+++.+.|.++-.. ...+...+.+..
T Consensus 164 ~~~~~a~~~Ga-~Vi~~~~~----~~~----~-~~~~~~ga~~~~~~~------~~~~~~~~~~~~ 213 (334)
T 3qwb_A 164 ILNQLLKMKGA-HTIAVAST----DEK----L-KIAKEYGAEYLINAS------KEDILRQVLKFT 213 (334)
T ss_dssp HHHHHHHHTTC-EEEEEESS----HHH----H-HHHHHTTCSEEEETT------TSCHHHHHHHHT
T ss_pred HHHHHHHHCCC-EEEEEeCC----HHH----H-HHHHHcCCcEEEeCC------CchHHHHHHHHh
Confidence 35566777899 67766531 221 1 134556777666432 233555555554
No 302
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=29.66 E-value=1.5e+02 Score=20.87 Aligned_cols=63 Identities=17% Similarity=0.102 Sum_probs=41.1
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE 108 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~ 108 (251)
...++...+|++.+.+..+++++-... .+....++..|++..+. ..++.......|..+++..
T Consensus 60 ~~g~~~~~~l~~~~~~~pii~ls~~~~--~~~~~~~~~~g~~~~l~----kP~~~~~l~~~i~~~~~~~ 122 (142)
T 2qxy_A 60 EESLNLIRRIREEFPDTKVAVLSAYVD--KDLIINSVKAGAVDYIL----KPFRLDYLLERVKKIISST 122 (142)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEESCCC--HHHHHHHHHHTCSCEEE----SSCCHHHHHHHHHHHHHC-
T ss_pred CcHHHHHHHHHHHCCCCCEEEEECCCC--HHHHHHHHHCCcceeEe----CCCCHHHHHHHHHHHHhhc
Confidence 455677777777644555665554432 56678889999996543 2457788888888877643
No 303
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=29.48 E-value=1.2e+02 Score=25.51 Aligned_cols=88 Identities=7% Similarity=0.033 Sum_probs=47.1
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHC-CCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEccee
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAM-GADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQA 119 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~-GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s 119 (251)
.+.-....|++.+++.+++.++- +. ..+.++ .+ +.|+++.++..........-..+...+++.+||+++--..
T Consensus 16 ~~~p~l~~Lk~~~P~~~i~~l~~-~~-~~~l~~---~~p~i~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vid~~~- 89 (348)
T 1psw_A 16 MSQSLYRTLQARYPQAIIDVMAP-AW-CRPLLS---RMPEVNEAIPMPLGHGALEIGERRKLGHSLREKRYDRAYVLPN- 89 (348)
T ss_dssp HHHHHHHHHHHHSTTCEEEEEEC-GG-GHHHHT---TCTTEEEEEEC-------CHHHHHHHHHHTTTTTCSEEEECSC-
T ss_pred HHHHHHHHHHHHCCCCEEEEEEC-cc-hhHHHh---cCCccCEEEEecCCccccchHHHHHHHHHHHhcCCCEEEECCC-
Confidence 44555566777767888887764 32 233221 12 3678887642211111112234555666678999884332
Q ss_pred ecCCcCcHHHHHHHHcCCCc
Q 025565 120 IDDDCNQTGQMVAGLLSWPQ 139 (251)
Q Consensus 120 ~d~~~~~v~~~lA~~Lg~p~ 139 (251)
..-...++...|+|.
T Consensus 90 -----~~~sa~~~~~~~~~~ 104 (348)
T 1psw_A 90 -----SFKSALVPLFAGIPH 104 (348)
T ss_dssp -----CSGGGHHHHHTTCSE
T ss_pred -----ChHHHHHHHHhCCCE
Confidence 123556777778774
No 304
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=29.25 E-value=2.5e+02 Score=23.34 Aligned_cols=70 Identities=14% Similarity=0.119 Sum_probs=42.3
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHH-HCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGL-AMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~l-a~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|++. |.+|+.+.-... ..+.+++.. ..|.- ..+..| -.|...+.+++.++.++. +.|+++...
T Consensus 45 G~~ia~~la~~--G~~V~~~~r~~~-~~~~~~~~~~~~~~~--~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lVnnA 116 (296)
T 3k31_A 45 AWGIAKAVCAQ--GAEVALTYLSET-FKKRVDPLAESLGVK--LTVPCD-VSDAESVDNMFKVLAEEWGSLDFVVHAV 116 (296)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSGG-GHHHHHHHHHHHTCC--EEEECC-TTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCChH-HHHHHHHHHHhcCCe--EEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 34567777775 667776665543 233343333 33432 333322 457888888888887776 689888655
No 305
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=29.10 E-value=2.6e+02 Score=23.50 Aligned_cols=77 Identities=16% Similarity=0.141 Sum_probs=49.0
Q ss_pred HHHHHHHHhhhhCCCceEEE-Ee--eC--------CchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhC
Q 025565 41 IALEEALRIKESGLASEVVA-VS--MG--------PAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEK 109 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~a-l~--~G--------~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~ 109 (251)
+.+..+.+.+.+ .|.+|.+ ++ +| ++.+.+.++.+..+|+|.+.+.+.-....|..+.+.+..+.+..+
T Consensus 120 ~~~~~~v~~a~~-~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~ 198 (295)
T 1ydn_A 120 ERLSPVIGAAIN-DGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAP 198 (295)
T ss_dssp HHHHHHHHHHHH-TTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHH-cCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCC
Confidence 334455566655 5777652 22 22 123455677777999998888753335689998888888776654
Q ss_pred -CCEEEEcce
Q 025565 110 -PGLIILGKQ 118 (251)
Q Consensus 110 -~dlIl~G~~ 118 (251)
..+.+=++.
T Consensus 199 ~~~l~~H~Hn 208 (295)
T 1ydn_A 199 AHSLAGHYHD 208 (295)
T ss_dssp GGGEEEEEBC
T ss_pred CCeEEEEECC
Confidence 347776654
No 306
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=29.09 E-value=2.2e+02 Score=22.77 Aligned_cols=70 Identities=16% Similarity=0.132 Sum_probs=41.5
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+.+.-..+..++..+ .+|.. +..+..| -.|...+...+.++.++. ++|+++...
T Consensus 21 IG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~---~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~li~~A 91 (261)
T 3n74_A 21 FGEGMAKRFAKG--GAKVVIVDRDKAGAERVAG---EIGDA-ALAVAAD-ISKEADVDAAVEAALSKFGKVDILVNNA 91 (261)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH---HHCTT-EEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH---HhCCc-eEEEEec-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 345677888875 6677766544332222222 23433 4444433 457777777777777766 689888655
No 307
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=29.03 E-value=1.5e+02 Score=20.70 Aligned_cols=61 Identities=16% Similarity=0.225 Sum_probs=38.8
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE 108 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~ 108 (251)
.++...+|++..+...+++ +......+...+++..|++..+. ..++...+...|.++.+..
T Consensus 66 g~~~~~~l~~~~~~~~ii~--~s~~~~~~~~~~~~~~g~~~~l~----kP~~~~~l~~~i~~~~~~~ 126 (137)
T 3hdg_A 66 GLEMLDRIKAGGAKPYVIV--ISAFSEMKYFIKAIELGVHLFLP----KPIEPGRLMETLEDFRHIK 126 (137)
T ss_dssp HHHHHHHHHHTTCCCEEEE--CCCCCCHHHHHHHHHHCCSEECC----SSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcEEE--EecCcChHHHHHHHhCCcceeEc----CCCCHHHHHHHHHHHHHHH
Confidence 4566667776533434443 33333356778889999997433 2467888888888877653
No 308
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=28.78 E-value=2.3e+02 Score=22.75 Aligned_cols=74 Identities=8% Similarity=-0.017 Sum_probs=45.3
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh--CCCEEEEcc
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE--KPGLIILGK 117 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~--~~dlIl~G~ 117 (251)
--..+.|.+|+++ |.+|+++.-.+...++..+++...|.. +..+..| ..|......++.++.++. ++|+|+.-.
T Consensus 25 giG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~~~~id~li~~A 100 (266)
T 1xq1_A 25 GIGHAIVEEFAGF--GAVIHTCARNEYELNECLSKWQKKGFQ-VTGSVCD-ASLRPEREKLMQTVSSMFGGKLDILINNL 100 (266)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTSHHHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred HHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCe-eEEEECC-CCCHHHHHHHHHHHHHHhCCCCcEEEECC
Confidence 3445677788875 668887765544334444555555654 4333333 457777777777776665 689887543
No 309
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=28.73 E-value=2.4e+02 Score=23.13 Aligned_cols=70 Identities=10% Similarity=0.110 Sum_probs=41.4
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+.+.-..+..++...+ .|.. +..+..| -.|...+.+++.++.++. ++|+++.-.
T Consensus 39 IG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~---~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lv~nA 109 (277)
T 4dqx_A 39 IGRATAELFAKN--GAYVVVADVNEDAAVRVANE---IGSK-AFGVRVD-VSSAKDAESMVEKTTAKWGRVDVLVNNA 109 (277)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHH---HCTT-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---hCCc-eEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345667777775 66777665543322222222 3433 4444433 457788888888877776 689888654
No 310
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=28.72 E-value=1.3e+02 Score=26.73 Aligned_cols=88 Identities=20% Similarity=0.070 Sum_probs=46.6
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeC---CC-CCHHHHHHHHHHHHHHhCCCEEEE
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAA---GQ-LYPLTVAKILKSLVEVEKPGLIIL 115 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~---~~-~d~~a~a~~La~~ik~~~~dlIl~ 115 (251)
..++..+..+++. |.+++++.-.+...... ..-+|+.+.+... .. .|. ..|.+++++.++|+|+.
T Consensus 12 ~~~~~~~~a~~~~--G~~vv~v~~~~~~~~~~-----~~~ad~~~~~~p~~~~~~~~d~----~~l~~~~~~~~~d~v~~ 80 (449)
T 2w70_A 12 EIALRILRACKEL--GIKTVAVHSSADRDLKH-----VLLADETVCIGPAPSVKSYLNI----PAIISAAEITGAVAIHP 80 (449)
T ss_dssp HHHHHHHHHHHHH--TCEEEEEEEGGGTTCHH-----HHHSSEEEEEECSSGGGTTTCH----HHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHc--CCeEEEEeccccccCch-----hhhCCEEEEcCCCCccccccCH----HHHHHHHHHcCCCEEEE
Confidence 3556666666664 77888775432210111 1126888877311 12 233 45667788889999998
Q ss_pred cceeecCCcCcHHHHHHHHcCCCcc
Q 025565 116 GKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 116 G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
|..... +.. ....+.+.+|+|++
T Consensus 81 ~~g~~~-e~~-~~~~~~e~~gi~~~ 103 (449)
T 2w70_A 81 GYGFLS-ENA-NFAEQVERSGFIFI 103 (449)
T ss_dssp CSSTTT-TCH-HHHHHHHHTTCEES
T ss_pred CCCCcc-cCH-HHHHHHHHcCCceE
Confidence 742111 111 12344455666543
No 311
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=28.34 E-value=1.4e+02 Score=25.87 Aligned_cols=57 Identities=11% Similarity=-0.054 Sum_probs=38.9
Q ss_pred EEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 84 VHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 84 i~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
+.+.|+...++........+++.+.+.+.|+-+.+|. ...-...++...++|+++..
T Consensus 58 l~~~D~~~~~~~~a~~~a~~li~~~~v~aiiG~~~s~---~~~a~~~~~~~~~ip~i~~~ 114 (419)
T 3h5l_A 58 LVFADTQSKGVDVVIQSAQRLIDRDNASALIAGYNLE---NGTALHDVAADAGVIAMHAN 114 (419)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHTTCCSEEECSCCSS---CSCHHHHHHHHHTCEEEECC
T ss_pred EEEccCCCCCHHHHHHHHHHHhhhcCCeEEEccccch---hHHHhHHHHHHcCCeEEEcC
Confidence 3344443357777777777788778999998655542 23355678888999999754
No 312
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=28.11 E-value=33 Score=28.83 Aligned_cols=68 Identities=10% Similarity=0.071 Sum_probs=40.2
Q ss_pred EEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCC-cCcHHHHHHHHcCC
Q 025565 59 VAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDD-CNQTGQMVAGLLSW 137 (251)
Q Consensus 59 ~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~-~~~v~~~lA~~Lg~ 137 (251)
+|++-|.. ...++.+.+.|||- .|+.+-.+.. +..+++.+..+|.+|+..+... -..++..|.+.++.
T Consensus 168 VAv~~GsG--~~~~~~a~~~gaD~--~iTGd~~~h~-------~~~a~e~gi~~i~~GH~~tE~~~~~~l~~~L~~~~~~ 236 (247)
T 1nmo_A 168 VAWCTGGG--QSFIDSAARFGVDA--FITGEVSEQT-------IHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDL 236 (247)
T ss_dssp EEECSSSC--GGGHHHHHHHCCSE--EEESCCCHHH-------HHHHHHTTCEEEECCHHHHTSHHHHHHHHHHHHHSSC
T ss_pred EEEECCCc--HHHHHHHHHcCCCE--EEEcCccHHH-------HHHHHHCCCeEEEcCCHHHHHHHHHHHHHHHHHhcCC
Confidence 56676654 46788999999993 3333322211 1123456899999999865532 22445555555544
No 313
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=28.08 E-value=69 Score=28.14 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=37.1
Q ss_pred hhHHHHHHHHHCCCCEEE-EEeeC-C---CCCHHHHHHHHHHHHHHhCCCEEEEccee
Q 025565 67 QCVDTLRTGLAMGADRGV-HVEAA-G---QLYPLTVAKILKSLVEVEKPGLIILGKQA 119 (251)
Q Consensus 67 ~~~~~l~~~la~GaD~vi-~v~~~-~---~~d~~a~a~~La~~ik~~~~dlIl~G~~s 119 (251)
+..+...+|...||.-+. |+.|+ . ..|++.|..++. .|++..+|+|+--.+.
T Consensus 49 EIa~~A~~a~~AGAaivHlHvRd~~~G~ps~d~~~y~e~~~-~IR~~~~d~ii~~TTg 105 (316)
T 3c6c_A 49 QIADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVD-RVRSSGTDIVLNLTCG 105 (316)
T ss_dssp HHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHH-HHHTTTCCCEEEEECC
T ss_pred HHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHH-HHHHHCCCeEEEeCCC
Confidence 344556778888999765 46664 2 369999999995 5666678999876654
No 314
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=27.98 E-value=55 Score=29.02 Aligned_cols=80 Identities=18% Similarity=0.218 Sum_probs=45.1
Q ss_pred ceEEEEeeCCchhHHHHHHHHH--CCCCE-EEEEeeCCCCCHHHHHHHHH---HHHHHhCCCEEEEcceeecCCcCcHHH
Q 025565 56 SEVVAVSMGPAQCVDTLRTGLA--MGADR-GVHVEAAGQLYPLTVAKILK---SLVEVEKPGLIILGKQAIDDDCNQTGQ 129 (251)
Q Consensus 56 ~~V~al~~G~~~~~~~l~~~la--~GaD~-vi~v~~~~~~d~~a~a~~La---~~ik~~~~dlIl~G~~s~d~~~~~v~~ 129 (251)
-+...+.-|... +..+.+... +|.++ -+.++.+...-...++..+. +++++.+||+|++-. | .+..++.
T Consensus 36 ~~~~~~~tgqh~-~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~kPD~Vlv~g---d-~~~~~aa 110 (385)
T 4hwg_A 36 TKHILVHTGQNY-AYELNQVFFDDMGIRKPDYFLEVAADNTAKSIGLVIEKVDEVLEKEKPDAVLFYG---D-TNSCLSA 110 (385)
T ss_dssp SEEEEEECSCHH-HHHHTHHHHC-CCCCCCSEECCCCCCCSHHHHHHHHHHHHHHHHHHCCSEEEEES---C-SGGGGGH
T ss_pred CCEEEEEeCCCC-ChhHHHHHHhhCCCCCCceecCCCCCCHHHHHHHHHHHHHHHHHhcCCcEEEEEC---C-chHHHHH
Confidence 366667777642 334555332 34421 23343333333556665544 567788999888633 1 1123557
Q ss_pred HHHHHcCCCcc
Q 025565 130 MVAGLLSWPQG 140 (251)
Q Consensus 130 ~lA~~Lg~p~v 140 (251)
..|.++|+|++
T Consensus 111 laA~~~~IPv~ 121 (385)
T 4hwg_A 111 IAAKRRKIPIF 121 (385)
T ss_dssp HHHHHTTCCEE
T ss_pred HHHHHhCCCEE
Confidence 88889999965
No 315
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=27.80 E-value=76 Score=27.27 Aligned_cols=17 Identities=18% Similarity=0.132 Sum_probs=11.7
Q ss_pred HHHHHHHHCCCCEEEEEe
Q 025565 70 DTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 70 ~~l~~~la~GaD~vi~v~ 87 (251)
-+++-+.++|+ +++.+.
T Consensus 166 ~a~qla~~~Ga-~Vi~~~ 182 (346)
T 3fbg_A 166 IATQIAKAYGL-RVITTA 182 (346)
T ss_dssp HHHHHHHHTTC-EEEEEC
T ss_pred HHHHHHHHcCC-EEEEEe
Confidence 34566677898 777765
No 316
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=27.67 E-value=1.5e+02 Score=20.31 Aligned_cols=60 Identities=13% Similarity=0.166 Sum_probs=37.1
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHH
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVE 106 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik 106 (251)
...++...++++. .+..++.++-... ......++..|++..+. . .++.......+.++++
T Consensus 59 ~~g~~~~~~lr~~-~~~~ii~~t~~~~--~~~~~~~~~~ga~~~l~-K---P~~~~~l~~~i~~~l~ 118 (120)
T 3f6p_A 59 KDGVEVCREVRKK-YDMPIIMLTAKDS--EIDKVIGLEIGADDYVT-K---PFSTRELLARVKANLR 118 (120)
T ss_dssp THHHHHHHHHHTT-CCSCEEEEEESSC--HHHHHHHHHTTCCEEEE-E---SCCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhc-CCCCEEEEECCCC--hHHHHHHHhCCcceeEc-C---CCCHHHHHHHHHHHHh
Confidence 3456666777765 4556776665543 35566788999986544 2 3566666666655543
No 317
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=27.65 E-value=1.7e+02 Score=20.94 Aligned_cols=59 Identities=14% Similarity=0.196 Sum_probs=36.2
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHH
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVE 106 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik 106 (251)
.++...+|++...+..|++++-... .+....++..|++..+.- .++.......|..+++
T Consensus 66 g~~~~~~l~~~~~~~~ii~ls~~~~--~~~~~~~~~~g~~~~l~k----p~~~~~L~~~i~~~~~ 124 (153)
T 3cz5_A 66 GIEATRHIRQWDGAARILIFTMHQG--SAFALKAFEAGASGYVTK----SSDPAELVQAIEAILA 124 (153)
T ss_dssp HHHHHHHHHHHCTTCCEEEEESCCS--HHHHHHHHHTTCSEEEET----TSCTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCeEEEEECCCC--HHHHHHHHHCCCcEEEec----CCCHHHHHHHHHHHHh
Confidence 4556666666544556666654432 466788999999976542 3455556666665554
No 318
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=27.50 E-value=1.7e+02 Score=25.40 Aligned_cols=79 Identities=15% Similarity=-0.060 Sum_probs=46.0
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeec
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAID 121 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d 121 (251)
++..++.+++. |.+++++..-+..+ ...+ -+|+.+.++ ..|. ..|.+++++.++|.|+.+.. +
T Consensus 19 ~~~~~~a~~~~--G~~~v~v~~~~~~~-~~~~-----~ad~~~~~~---~~d~----~~l~~~~~~~~~d~v~~~~~--~ 81 (403)
T 4dim_A 19 QLGLYKAAKEL--GIHTIAGTMPNAHK-PCLN-----LADEISYMD---ISNP----DEVEQKVKDLNLDGAATCCL--D 81 (403)
T ss_dssp GHHHHHHHHHH--TCEEEEEECSSCCH-HHHH-----HCSEEEECC---TTCH----HHHHHHTTTSCCSEEECCSC--S
T ss_pred HHHHHHHHHHC--CCEEEEEcCCCCCC-cchh-----hCCeEEEec---CCCH----HHHHHHHHHcCCCEEEeCCc--c
Confidence 45556666664 77888886522121 1122 268887764 2243 45667778889999998521 2
Q ss_pred CCcCcHHHHHHHHcCCC
Q 025565 122 DDCNQTGQMVAGLLSWP 138 (251)
Q Consensus 122 ~~~~~v~~~lA~~Lg~p 138 (251)
.. -....++++.+|+|
T Consensus 82 ~~-~~~~a~~~~~~gl~ 97 (403)
T 4dim_A 82 TG-IVSLARICDKENLV 97 (403)
T ss_dssp TT-HHHHHHHHHHHTCS
T ss_pred hh-HHHHHHHHHHcCcC
Confidence 12 12456677777765
No 319
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=27.46 E-value=1.7e+02 Score=23.62 Aligned_cols=69 Identities=12% Similarity=0.016 Sum_probs=41.1
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-.+.|.+|+++ |.+|+++.-.++..++..++ .|. ++..+..| -.|...+..++.++.++. +.|+++.-.
T Consensus 18 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~---~~~-~~~~~~~D-~~~~~~~~~~~~~~~~~~g~iD~lv~nA 87 (254)
T 1hdc_A 18 GAEAARQAVAA--GARVVLADVLDEEGAATARE---LGD-AARYQHLD-VTIEEDWQRVVAYAREEFGSVDGLVNNA 87 (254)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHT---TGG-GEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---hCC-ceeEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 34667778875 67877765544322222222 243 34444433 457777888888777776 689888644
No 320
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=27.46 E-value=42 Score=29.76 Aligned_cols=64 Identities=17% Similarity=0.079 Sum_probs=44.4
Q ss_pred HHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeC-CCCCHHHHHHHHHHHHHHh
Q 025565 44 EEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAA-GQLYPLTVAKILKSLVEVE 108 (251)
Q Consensus 44 e~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~-~~~d~~a~a~~La~~ik~~ 108 (251)
+.-.++++. ..-.|+.+..|+-...+.++.++..|+|-+.+.+.= ...||...++.+.++++++
T Consensus 230 ell~~i~~~-~~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~~~ 294 (330)
T 2yzr_A 230 EVLLEVKKL-GRLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYNY 294 (330)
T ss_dssp HHHHHHHHH-TSCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHh-CCCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHHhc
Confidence 444455554 333555578888644566788889999998887631 1358999999998888753
No 321
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=27.42 E-value=60 Score=27.66 Aligned_cols=51 Identities=14% Similarity=0.008 Sum_probs=26.5
Q ss_pred HHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcC
Q 025565 70 DTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLS 136 (251)
Q Consensus 70 ~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg 136 (251)
.+++-+.++|+ +++.+... ... + +.+++.+.|.++-.. ...+...+.+..+
T Consensus 156 ~~~~~a~~~Ga-~Vi~~~~~----~~~----~-~~~~~~Ga~~~~~~~------~~~~~~~~~~~~~ 206 (325)
T 3jyn_A 156 LACQWAKALGA-KLIGTVSS----PEK----A-AHAKALGAWETIDYS------HEDVAKRVLELTD 206 (325)
T ss_dssp HHHHHHHHHTC-EEEEEESS----HHH----H-HHHHHHTCSEEEETT------TSCHHHHHHHHTT
T ss_pred HHHHHHHHCCC-EEEEEeCC----HHH----H-HHHHHcCCCEEEeCC------CccHHHHHHHHhC
Confidence 34566677899 67776521 111 1 233455677665322 2345555555543
No 322
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=27.39 E-value=78 Score=27.54 Aligned_cols=32 Identities=16% Similarity=0.183 Sum_probs=18.6
Q ss_pred CCceEEEEeeCCchh-HHHHHHHHHCCCCEEEEEe
Q 025565 54 LASEVVAVSMGPAQC-VDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 54 ~g~~V~al~~G~~~~-~~~l~~~la~GaD~vi~v~ 87 (251)
.|.+|.+. |.... .-+++-|.++|+.+++.++
T Consensus 195 ~g~~VlV~--GaG~vG~~aiqlak~~Ga~~Vi~~~ 227 (376)
T 1e3i_A 195 PGSTCAVF--GLGCVGLSAIIGCKIAGASRIIAID 227 (376)
T ss_dssp TTCEEEEE--CCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEE--CCCHHHHHHHHHHHHcCCCeEEEEc
Confidence 45455443 43222 3345666778998888775
No 323
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=27.32 E-value=2.4e+02 Score=22.64 Aligned_cols=72 Identities=14% Similarity=0.076 Sum_probs=44.1
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCch-hHHHHHHHHHC-CCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQ-CVDTLRTGLAM-GADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~-~~~~l~~~la~-GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-.+.|.+|+++ |.+|+++.-.++. .++..+++... |.+ +..+..| -.|...+...+.++.++. ++|+++.-.
T Consensus 17 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~v~~~~~~~~~~~g~iD~lv~~A 91 (260)
T 1x1t_A 17 GLGIATALAAQ--GADIVLNGFGDAAEIEKVRAGLAAQHGVK-VLYDGAD-LSKGEAVRGLVDNAVRQMGRIDILVNNA 91 (260)
T ss_dssp HHHHHHHHHHT--TCEEEEECCSCHHHHHHHHHHHHHHHTSC-EEEECCC-TTSHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHhccCCc-EEEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 34667788875 6788776655543 33333333332 543 4444433 457777888888777776 689888654
No 324
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=27.31 E-value=2.2e+02 Score=22.99 Aligned_cols=73 Identities=7% Similarity=0.026 Sum_probs=43.1
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHC-CCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAM-GADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~-GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.-.++..++..+++... .-.++..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 20 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lv~~A 94 (267)
T 2gdz_A 20 GRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD-VADQQQLRDTFRKVVDHFGRLDILVNNA 94 (267)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 34667778875 678887765543323222333221 12245555433 457778888887777776 589888654
No 325
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=27.19 E-value=2.3e+02 Score=22.31 Aligned_cols=72 Identities=14% Similarity=0.120 Sum_probs=43.8
Q ss_pred HHHHHHHhhhhCCCceEEEE-eeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAV-SMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al-~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++ .-.+...++..+++-..|.+ +..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 18 G~~~a~~l~~~--G~~V~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~~~~d~vi~~A 91 (247)
T 2hq1_A 18 GKAIAWKLGNM--GANIVLNGSPASTSLDATAEEFKAAGIN-VVVAKGD-VKNPEDVENMVKTAMDAFGRIDILVNNA 91 (247)
T ss_dssp HHHHHHHHHHT--TCEEEEEECTTCSHHHHHHHHHHHTTCC-EEEEESC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEcCcCHHHHHHHHHHHHhcCCc-EEEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 34667778875 6687776 33433334444444455654 4444433 457777777777777766 689888654
No 326
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=27.18 E-value=2.5e+02 Score=22.82 Aligned_cols=70 Identities=10% Similarity=0.113 Sum_probs=44.0
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcce
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGKQ 118 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~~ 118 (251)
-.+.|.+|+++ |.+|+.+.-..+..++..++. |..-.++ ..| -.|...+.+.+.++.++. +.|+++....
T Consensus 24 G~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~---~~~~~~~-~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nAg 94 (271)
T 3tzq_B 24 GLETSRVLARA--GARVVLADLPETDLAGAAASV---GRGAVHH-VVD-LTNEVSVRALIDFTIDTFGRLDIVDNNAA 94 (271)
T ss_dssp HHHHHHHHHHT--TCEEEEEECTTSCHHHHHHHH---CTTCEEE-ECC-TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHh---CCCeEEE-ECC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 45677788875 678877776665544444433 4433333 222 457778888888877776 6898887553
No 327
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=27.18 E-value=1.5e+02 Score=20.42 Aligned_cols=58 Identities=14% Similarity=0.209 Sum_probs=34.6
Q ss_pred HHHHHHHhhhh--CCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHH
Q 025565 42 ALEEALRIKES--GLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLV 105 (251)
Q Consensus 42 Ale~A~~lae~--~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~i 105 (251)
.++...+|++. .....|+.++-... .+....++..|++..+. . .+++......+.+++
T Consensus 61 g~~~~~~l~~~~~~~~~pii~~s~~~~--~~~~~~~~~~Ga~~~l~-K---P~~~~~L~~~i~~~l 120 (122)
T 3gl9_A 61 GFTVLKKLQEKEEWKRIPVIVLTAKGG--EEDESLALSLGARKVMR-K---PFSPSQFIEEVKHLL 120 (122)
T ss_dssp HHHHHHHHHTSTTTTTSCEEEEESCCS--HHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccCCCEEEEecCCc--hHHHHHHHhcChhhhcc-C---CCCHHHHHHHHHHHh
Confidence 34555556543 13446666665432 45677889999996443 2 456776666666554
No 328
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=27.16 E-value=1.3e+02 Score=26.84 Aligned_cols=67 Identities=16% Similarity=0.022 Sum_probs=39.3
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCC---CC-CHHHHHHHHHHHHHHhCCCEEEE
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG---QL-YPLTVAKILKSLVEVEKPGLIIL 115 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~---~~-d~~a~a~~La~~ik~~~~dlIl~ 115 (251)
..++..++.+++ .|.+++++.-.+.......+ -+|+.+.+.... .+ |. ..|.+++++.++|+|+.
T Consensus 11 ~~~~~i~~a~~~--~G~~vv~v~~~~~~~~~~~~-----~ad~~~~i~~~~~~~~~~d~----~~l~~~~~~~~~d~v~~ 79 (451)
T 2vpq_A 11 EIAVRIIRACRD--LGIQTVAIYSEGDKDALHTQ-----IADEAYCVGPTLSKDSYLNI----PNILSIATSTGCDGVHP 79 (451)
T ss_dssp HHHHHHHHHHHH--TTCEEEEEEEGGGTTCHHHH-----HSSEEEEEECSSGGGTTTCH----HHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHHHHH--cCCEEEEEecccccccchhh-----hCCEEEEcCCCCccccccCH----HHHHHHHHHcCCCEEEE
Confidence 345556666666 47788877543321011111 268988875211 22 33 45667788889999998
Q ss_pred cc
Q 025565 116 GK 117 (251)
Q Consensus 116 G~ 117 (251)
|.
T Consensus 80 ~~ 81 (451)
T 2vpq_A 80 GY 81 (451)
T ss_dssp CS
T ss_pred CC
Confidence 84
No 329
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=27.00 E-value=2.4e+02 Score=22.55 Aligned_cols=70 Identities=13% Similarity=0.097 Sum_probs=44.5
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.-.++ ++..+++...|.+ +..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 17 G~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~l~~~~~~-~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lv~~A 87 (255)
T 2q2v_A 17 GLGIAQVLARA--GANIVLNGFGDP--APALAEIARHGVK-AVHHPAD-LSDVAQIEALFALAEREFGGVDILVNNA 87 (255)
T ss_dssp HHHHHHHHHHT--TCEEEEECSSCC--HHHHHHHHTTSCC-EEEECCC-TTSHHHHHHHHHHHHHHHSSCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCch--HHHHHHHHhcCCc-eEEEeCC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 34677788875 678877655543 3444555455644 4444433 457778888887777776 689888644
No 330
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=26.94 E-value=2.3e+02 Score=23.84 Aligned_cols=68 Identities=10% Similarity=0.167 Sum_probs=39.7
Q ss_pred HHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 43 LEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
.+.|++|+++ |.+|+......+..++..++ +|.. ++.+..| -.|...+.+.+.++.++. +.|+++.-.
T Consensus 43 ~aiA~~la~~--Ga~V~i~~r~~~~l~~~~~~---~g~~-~~~~~~D-v~~~~~v~~~~~~~~~~~G~iDiLVNNA 111 (273)
T 4fgs_A 43 LAAAKRFVAE--GARVFITGRRKDVLDAAIAE---IGGG-AVGIQAD-SANLAELDRLYEKVKAEAGRIDVLFVNA 111 (273)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHHHHHHHHHH---HCTT-CEEEECC-TTCHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred HHHHHHHHHC--CCEEEEEECCHHHHHHHHHH---cCCC-eEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4567777775 66776555443322222222 3543 3333322 457888888888888887 578777543
No 331
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=26.87 E-value=65 Score=27.71 Aligned_cols=18 Identities=22% Similarity=0.361 Sum_probs=12.4
Q ss_pred HHHHHHHHHCCCCEEEEEe
Q 025565 69 VDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 69 ~~~l~~~la~GaD~vi~v~ 87 (251)
..+++-+.++|+ +++.+.
T Consensus 174 ~~~~~~a~~~Ga-~Vi~~~ 191 (342)
T 4eye_A 174 TAAIQIAKGMGA-KVIAVV 191 (342)
T ss_dssp HHHHHHHHHTTC-EEEEEE
T ss_pred HHHHHHHHHcCC-EEEEEe
Confidence 335566778899 777765
No 332
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=26.80 E-value=2.4e+02 Score=22.45 Aligned_cols=73 Identities=15% Similarity=0.046 Sum_probs=46.3
Q ss_pred HHHHHHHHhhhhCCCceEEEEe-eCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVS-MGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~-~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+++. -......+.+.+..+.|.+ +..+..| -.|...+.+.+.++.++. +.|+++...
T Consensus 25 iG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~~A 99 (256)
T 3ezl_A 25 IGTSICQRLHKD--GFRVVAGCGPNSPRRVKWLEDQKALGFD-FYASEGN-VGDWDSTKQAFDKVKAEVGEIDVLVNNA 99 (256)
T ss_dssp HHHHHHHHHHHT--TEEEEEEECTTCSSHHHHHHHHHHTTCC-CEEEECC-TTCHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCe-eEEEecC-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 445778888875 67776655 2233345556666667754 4444433 457777777887777776 578887654
No 333
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=26.79 E-value=49 Score=28.44 Aligned_cols=18 Identities=11% Similarity=-0.079 Sum_probs=12.0
Q ss_pred HHHHHHHHHCCCCEEEEEe
Q 025565 69 VDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 69 ~~~l~~~la~GaD~vi~v~ 87 (251)
..+++-+.++|+ +++.+.
T Consensus 159 ~~~~~~a~~~Ga-~Vi~~~ 176 (340)
T 3gms_A 159 HLFAQLSQILNF-RLIAVT 176 (340)
T ss_dssp HHHHHHHHHHTC-EEEEEE
T ss_pred HHHHHHHHHcCC-EEEEEe
Confidence 334566677898 777765
No 334
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=26.70 E-value=67 Score=27.70 Aligned_cols=54 Identities=13% Similarity=0.130 Sum_probs=37.6
Q ss_pred CchhHHHHHHHHHCCCCEEE-EEeeCC---CCCHHHHHHHHHHHHHHhCCCEEEEccee
Q 025565 65 PAQCVDTLRTGLAMGADRGV-HVEAAG---QLYPLTVAKILKSLVEVEKPGLIILGKQA 119 (251)
Q Consensus 65 ~~~~~~~l~~~la~GaD~vi-~v~~~~---~~d~~a~a~~La~~ik~~~~dlIl~G~~s 119 (251)
+++..+...+|...||.-+. |+.|+. ..|++.|..++. .|++..||+|+--.+.
T Consensus 33 peEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~-~IR~~~pd~ii~~TTg 90 (282)
T 2y7e_A 33 PEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAIS-AIREVVPEIIIQISTG 90 (282)
T ss_dssp HHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHH-HHHHHCTTSEEEECSS
T ss_pred HHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHH-HHHHHCCCeEEEeCCC
Confidence 33444566778888988664 455432 369999999995 6676689999977763
No 335
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=26.53 E-value=2.2e+02 Score=23.34 Aligned_cols=83 Identities=8% Similarity=-0.029 Sum_probs=49.1
Q ss_pred eEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCC-C-----------------CCHHHHHHHHHHH--------------
Q 025565 57 EVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG-Q-----------------LYPLTVAKILKSL-------------- 104 (251)
Q Consensus 57 ~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~-~-----------------~d~~a~a~~La~~-------------- 104 (251)
+|..+-.|+- ....++.+...|+.++.+++.|. . .-.++.++.|.+.
T Consensus 33 ~VlVvG~Gg~-G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~ 111 (249)
T 1jw9_B 33 RVLIVGLGGL-GCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD 111 (249)
T ss_dssp EEEEECCSHH-HHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC
T ss_pred eEEEEeeCHH-HHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccCC
Confidence 6766666643 35567888889999999998653 0 1122233333221
Q ss_pred ---HHH--hCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccc
Q 025565 105 ---VEV--EKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTF 142 (251)
Q Consensus 105 ---ik~--~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 142 (251)
+.+ .++|+|+...-+ ..++..-...+...+.|++..
T Consensus 112 ~~~~~~~~~~~DvVi~~~d~--~~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 112 DAELAALIAEHDLVLDCTDN--VAVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HHHHHHHHHTSSEEEECCSS--HHHHHHHHHHHHHHTCCEEEE
T ss_pred HhHHHHHHhCCCEEEEeCCC--HHHHHHHHHHHHHcCCCEEEe
Confidence 011 157888876532 234556667777889998753
No 336
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=26.38 E-value=2.2e+02 Score=21.91 Aligned_cols=72 Identities=11% Similarity=0.136 Sum_probs=40.8
Q ss_pred eEEEEeeCCchh--------HHHHHH-HHHCCCCEEE--EEeeCCCCCHHHHHHHHHHHHHHhCCCEEEE-cceeecCCc
Q 025565 57 EVVAVSMGPAQC--------VDTLRT-GLAMGADRGV--HVEAAGQLYPLTVAKILKSLVEVEKPGLIIL-GKQAIDDDC 124 (251)
Q Consensus 57 ~V~al~~G~~~~--------~~~l~~-~la~GaD~vi--~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~-G~~s~d~~~ 124 (251)
+|..++.|++-. ...+.. +-.+|++-.. ++.| | +.+.++|.++++ .++|+|++ |.+|.+. -
T Consensus 9 rv~ii~tGdEl~~G~i~Dsn~~~l~~~l~~~G~~v~~~~iv~D----d-~~i~~al~~a~~-~~~DlVittGG~s~g~-~ 81 (164)
T 3pzy_A 9 SARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVVAD----G-SPVGEALRKAID-DDVDVILTSGGTGIAP-T 81 (164)
T ss_dssp EEEEEEECHHHHC----CCHHHHHHHHHHHTTCEECCCEEECS----S-HHHHHHHHHHHH-TTCSEEEEESCCSSST-T
T ss_pred EEEEEEECCCCCCCceeeHHHHHHHHHHHHCCCEEEEEEEeCC----H-HHHHHHHHHHHh-CCCCEEEECCCCCCCC-C
Confidence 678888887521 123444 4457876432 2322 5 777888887775 36897764 5555443 2
Q ss_pred CcHHHHHHHHc
Q 025565 125 NQTGQMVAGLL 135 (251)
Q Consensus 125 ~~v~~~lA~~L 135 (251)
-.++..++..+
T Consensus 82 D~t~eal~~~~ 92 (164)
T 3pzy_A 82 DSTPDQTVAVV 92 (164)
T ss_dssp CCHHHHHHTTC
T ss_pred ccHHHHHHHHh
Confidence 34444454443
No 337
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=26.36 E-value=1e+02 Score=21.63 Aligned_cols=60 Identities=13% Similarity=0.044 Sum_probs=36.8
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHH
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVE 106 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik 106 (251)
..++...+|++..+...++.++--. ..+...+++..|++..+. . .+++......|..+++
T Consensus 73 ~g~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~l~-K---P~~~~~L~~~i~~~~~ 132 (135)
T 3snk_A 73 LGKPGIVEARALWATVPLIAVSDEL--TSEQTRVLVRMNASDWLH-K---PLDGKELLNAVTFHDT 132 (135)
T ss_dssp GGSTTHHHHHGGGTTCCEEEEESCC--CHHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHTC-
T ss_pred hHHHHHHHHHhhCCCCcEEEEeCCC--CHHHHHHHHHcCcHhhcc-C---CCCHHHHHHHHHHHhc
Confidence 4455666677653445666555443 256678899999997544 2 4567766666655443
No 338
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=26.32 E-value=2.1e+02 Score=23.06 Aligned_cols=72 Identities=11% Similarity=0.065 Sum_probs=40.9
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|.+|+++ |.+|+++.-.+...++..++ +.. ..++..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 28 iG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~-~~~-~~~~~~~~~D-~~~~~~~~~~~~~~~~~~~~id~li~~A 100 (278)
T 2bgk_A 28 IGETTAKLFVRY--GAKVVIADIADDHGQKVCNN-IGS-PDVISFVHCD-VTKDEDVRNLVDTTIAKHGKLDIMFGNV 100 (278)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHH-HCC-TTTEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEcCChhHHHHHHHH-hCC-CCceEEEECC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345677778875 66777765443222222222 211 1245555433 457777777777777666 689888544
No 339
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=26.27 E-value=2.4e+02 Score=22.17 Aligned_cols=72 Identities=10% Similarity=0.114 Sum_probs=42.5
Q ss_pred HHHHHHHhhhhCCCceEEEEe-eCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVS-MGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~-~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++. -.+...++..+++-..|. ++..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 14 G~~la~~l~~~--G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~li~~A 87 (244)
T 1edo_A 14 GKAIALSLGKA--GCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGD-VSKEADVEAMMKTAIDAWGTIDVVVNNA 87 (244)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECC-TTSHHHHHHHHHHHHHHSSCCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEeCC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 34667788875 66777643 222222333333334454 55555533 457777777777777766 689888654
No 340
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=26.21 E-value=1.4e+02 Score=24.57 Aligned_cols=70 Identities=11% Similarity=-0.056 Sum_probs=40.7
Q ss_pred HHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 43 LEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
.+.|.+|+++ |.+|+++.-.++..++..+++ ... .++..+..| -.|...+..++.++.++. +.|+++.-.
T Consensus 35 ~aia~~La~~--G~~V~~~~r~~~~~~~~~~~~-~~~-~~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 105 (272)
T 2nwq_A 35 EACARRFAEA--GWSLVLTGRREERLQALAGEL-SAK-TRVLPLTLD-VRDRAAMSAAVDNLPEEFATLRGLINNA 105 (272)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH-TTT-SCEEEEECC-TTCHHHHHHHHHTCCGGGSSCCEEEECC
T ss_pred HHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-hcC-CcEEEEEcC-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 4567778875 678877665543323222222 222 355555533 457777777766666655 579888754
No 341
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=26.05 E-value=2.7e+02 Score=22.80 Aligned_cols=73 Identities=18% Similarity=0.090 Sum_probs=44.7
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHH-----CCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEE
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLA-----MGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLII 114 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la-----~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl 114 (251)
-..+.|.+|+++ |.+|+++.-.++..++..+++.. .|. ++..+..| -.|...+..++.++.++. ++|+|+
T Consensus 30 IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~li 105 (303)
T 1yxm_A 30 IGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQA-RVIPIQCN-IRNEEEVNNLVKSTLDTFGKINFLV 105 (303)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCC-CEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhccccCCc-cEEEEecC-CCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 345677778875 66877766554433333344433 243 45555533 457777778877777766 689888
Q ss_pred Ecc
Q 025565 115 LGK 117 (251)
Q Consensus 115 ~G~ 117 (251)
.-.
T Consensus 106 ~~A 108 (303)
T 1yxm_A 106 NNG 108 (303)
T ss_dssp ECC
T ss_pred ECC
Confidence 654
No 342
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=26.02 E-value=2e+02 Score=22.96 Aligned_cols=66 Identities=14% Similarity=0.101 Sum_probs=39.5
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHH-HCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGL-AMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~l-a~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.-.++. ++++. ..| +..+..| -.|...+..++.++.++. +.|+++.-.
T Consensus 18 G~~ia~~l~~~--G~~V~~~~r~~~~----~~~~~~~~~---~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~lvn~A 85 (245)
T 1uls_A 18 GRATLELFAKE--GARLVACDIEEGP----LREAAEAVG---AHPVVMD-VADPASVERGFAEALAHLGRLDGVVHYA 85 (245)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHH----HHHHHHTTT---CEEEECC-TTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHH----HHHHHHHcC---CEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 34567778875 6788776554322 22222 225 2333323 457778888888877776 589888644
No 343
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=25.99 E-value=44 Score=30.88 Aligned_cols=51 Identities=20% Similarity=0.196 Sum_probs=32.7
Q ss_pred CHHHHHHHHHHHHHH-hCCCEEEEcceeecCCcCcHHHHHHHHcCCCc-ccceee
Q 025565 93 YPLTVAKILKSLVEV-EKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQ-GTFASK 145 (251)
Q Consensus 93 d~~a~a~~La~~ik~-~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~-vt~v~~ 145 (251)
+...+.. +++.+++ ..| +|++|......+..+---++|+++|+|+ ++....
T Consensus 186 ~~~~i~~-~~~~l~~a~rp-vil~G~g~~~~~a~~~l~~lae~~~~Pv~~~~~~g 238 (528)
T 1q6z_A 186 NDQDLDI-LVKALNSASNP-AIVLGPDVDAANANADCVMLAERLKAPVWVAPSAP 238 (528)
T ss_dssp CHHHHHH-HHHHHHHCSSC-EEEECHHHHHTTCHHHHHHHHHHHTCCEEECSSCS
T ss_pred CHHHHHH-HHHHHhcCCCe-EEEECCccchhhHHHHHHHHHHHHCCCEEEeccCc
Confidence 4544443 3444444 456 8999987544444567789999999999 554333
No 344
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=25.77 E-value=1.6e+02 Score=20.11 Aligned_cols=60 Identities=20% Similarity=0.163 Sum_probs=36.1
Q ss_pred HHHHHHHhhhh--CCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHH
Q 025565 42 ALEEALRIKES--GLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEV 107 (251)
Q Consensus 42 Ale~A~~lae~--~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~ 107 (251)
.++...+|++. .....++.++-... .+....++..|++..+. ..++.......|..+++.
T Consensus 64 g~~l~~~l~~~~~~~~~~ii~~s~~~~--~~~~~~~~~~ga~~~l~----KP~~~~~l~~~i~~~~~~ 125 (128)
T 1jbe_A 64 GLELLKTIRAXXAMSALPVLMVTAEAK--KENIIAAAQAGASGYVV----KPFTAATLEEKLNKIFEK 125 (128)
T ss_dssp HHHHHHHHHC--CCTTCCEEEEESSCC--HHHHHHHHHTTCSEEEE----SSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccCCCcEEEEecCcc--HHHHHHHHHhCcCceee----cCCCHHHHHHHHHHHHHH
Confidence 34555666652 12345555554432 45677889999987543 245777777777776654
No 345
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis}
Probab=25.67 E-value=51 Score=30.28 Aligned_cols=55 Identities=9% Similarity=-0.058 Sum_probs=37.9
Q ss_pred CCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCC
Q 025565 80 ADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWP 138 (251)
Q Consensus 80 aD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p 138 (251)
||+.|++..+...+...+...|.+++++.++|.|+.+... .-...+++++.+|++
T Consensus 73 Ad~~~~~~~~~~~~~~~~i~~I~~~a~~~~id~Vip~sE~----~l~~~a~~~e~~Gi~ 127 (474)
T 3vmm_A 73 PDSIYWAHEDHNKPEEEVVEQIVKVAEMFGADAITTNNEL----FIAPMAKACERLGLR 127 (474)
T ss_dssp CSCCSSCCSCCCCCHHHHHHHHHHHHHHTTCSEEEESCGG----GHHHHHHHHHHTTCC
T ss_pred cCeEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEECCcc----cHHHHHHHHHHcCCC
Confidence 7888877533334666788888899999999999885421 112456667777776
No 346
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=25.67 E-value=3.2e+02 Score=23.48 Aligned_cols=74 Identities=8% Similarity=0.073 Sum_probs=45.5
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCch-------hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCE
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQ-------CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGL 112 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~-------~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dl 112 (251)
-..+.|++|++. |.+|+.+.-..+. ..+..++.-+.|. ++..+..| -.|...+.+++.++.++. +.|+
T Consensus 57 IG~aia~~La~~--Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~-~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iDi 132 (346)
T 3kvo_A 57 IGKAIALKAAKD--GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG-KALPCIVD-VRDEQQISAAVEKAIKKFGGIDI 132 (346)
T ss_dssp HHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTC-EEEEEECC-TTCHHHHHHHHHHHHHHHSCCCE
T ss_pred HHHHHHHHHHHC--CCEEEEEECChhhhhhhHHHHHHHHHHHHhcCC-eEEEEEcc-CCCHHHHHHHHHHHHHHcCCCCE
Confidence 345667777775 5677766554432 2344455555564 44444433 457788888888887776 6898
Q ss_pred EEEcce
Q 025565 113 IILGKQ 118 (251)
Q Consensus 113 Il~G~~ 118 (251)
++.-..
T Consensus 133 lVnnAG 138 (346)
T 3kvo_A 133 LVNNAS 138 (346)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 886553
No 347
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=25.63 E-value=2.3e+02 Score=21.78 Aligned_cols=74 Identities=16% Similarity=0.101 Sum_probs=39.2
Q ss_pred eEEEEeeCCchh--------HHHHHHH-----HHCCCCEEE--EEeeCCCCCHHHHHHHHHHHHHHhCCCEEEE-cceee
Q 025565 57 EVVAVSMGPAQC--------VDTLRTG-----LAMGADRGV--HVEAAGQLYPLTVAKILKSLVEVEKPGLIIL-GKQAI 120 (251)
Q Consensus 57 ~V~al~~G~~~~--------~~~l~~~-----la~GaD~vi--~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~-G~~s~ 120 (251)
++..++.|++-. ...+.+. -.+|++-.. ++.| |.+.+.++|.+++++ ++|+|++ |.++.
T Consensus 7 ~v~Ii~~GdEl~~G~i~D~n~~~l~~~~~~~l~~~G~~v~~~~iv~D----d~~~I~~~l~~a~~~-~~DlVittGG~g~ 81 (167)
T 2g2c_A 7 KSAIIVVSDRISTGTRENKALPLLQRLMSDELQDYSYELISEVVVPE----GYDTVVEAIATALKQ-GARFIITAGGTGI 81 (167)
T ss_dssp EEEEEEECHHHHHTSSCCCHHHHHHHHHCC----CEEEEEEEEEECS----SHHHHHHHHHHHHHT-TCSEEEEESCCSS
T ss_pred EEEEEEECCcccCCceeccHHHHHHHhHHhHHHHCCCEEeEEEEeCC----CHHHHHHHHHHHHhC-CCCEEEECCCCCC
Confidence 567777776521 1244444 346765332 2332 577777888777653 4897765 44443
Q ss_pred cCCcCcHHHHHHHHcC
Q 025565 121 DDDCNQTGQMVAGLLS 136 (251)
Q Consensus 121 d~~~~~v~~~lA~~Lg 136 (251)
+. --.++-.++..++
T Consensus 82 ~~-~D~t~ea~~~~~~ 96 (167)
T 2g2c_A 82 RA-KNQTPEATASFIH 96 (167)
T ss_dssp ST-TCCHHHHHHTTCS
T ss_pred CC-CcChHHHHHHHhC
Confidence 32 2334555554443
No 348
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=25.63 E-value=1.2e+02 Score=22.22 Aligned_cols=28 Identities=11% Similarity=0.287 Sum_probs=17.8
Q ss_pred HHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCC
Q 025565 103 SLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSW 137 (251)
Q Consensus 103 ~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~ 137 (251)
+.+++.+.|.|+.+... ++-+++.+|..
T Consensus 112 ~~l~~~G~d~vi~p~~~-------~a~~i~~~l~~ 139 (140)
T 3fwz_A 112 AYITERGANQVVMGERE-------IARTMLELLET 139 (140)
T ss_dssp HHHHHTTCSEEEEHHHH-------HHHHHHHHHHC
T ss_pred HHHHHCCCCEEECchHH-------HHHHHHHHhhC
Confidence 34556688888877643 66666665543
No 349
>4hti_A Receptor-type tyrosine-protein phosphatase N2; phogrin, IA-2BETA, protein-tyrosine phosphatase, transmembra protein, diabetes, autoimmunity; 1.95A {Homo sapiens} PDB: 4htj_A
Probab=25.55 E-value=79 Score=22.98 Aligned_cols=41 Identities=22% Similarity=0.262 Sum_probs=29.1
Q ss_pred hCCCEEEEcceeecC-CcCcHHHHHHHHcCCCcccceeeEEEe
Q 025565 108 EKPGLIILGKQAIDD-DCNQTGQMVAGLLSWPQGTFASKVVLD 149 (251)
Q Consensus 108 ~~~dlIl~G~~s~d~-~~~~v~~~lA~~Lg~p~vt~v~~l~~~ 149 (251)
..|-+|++++...+. +|.++--.||++|++|.- +-.++++.
T Consensus 9 eeygYIvt~~~~l~~~~G~~l~~~la~~l~l~~~-~F~~isV~ 50 (99)
T 4hti_A 9 EARGYIVTDRDPLRPEEGRRLVEDVARLLQVPSS-AFADVEVL 50 (99)
T ss_dssp -CCEEEEESCSSCCHHHHHHHHHHHHHHTTCCGG-GEEEEEEE
T ss_pred ceeEEEEECCCCCCHHHHHHHHHHHHHHhCCchh-heeeeeec
Confidence 467888888764332 678899999999999953 34555554
No 350
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=25.45 E-value=1.7e+02 Score=25.08 Aligned_cols=30 Identities=10% Similarity=0.029 Sum_probs=25.6
Q ss_pred EEEeeCCchhHHHHHHHHHCCCCEEEEEee
Q 025565 59 VAVSMGPAQCVDTLRTGLAMGADRGVHVEA 88 (251)
Q Consensus 59 ~al~~G~~~~~~~l~~~la~GaD~vi~v~~ 88 (251)
.+.-.|.+..+++++++.+.|+++++++.-
T Consensus 84 ~amry~~P~i~~~l~~l~~~G~~~ivvlPl 113 (310)
T 2h1v_A 84 IGLAHIEPFIEDAVAEMHKDGITEAVSIVL 113 (310)
T ss_dssp EEESSSSSBHHHHHHHHHHTTCCEEEEEES
T ss_pred ehhcCCCCCHHHHHHHHHhcCCCEEEEEEC
Confidence 456668888899999999999999999874
No 351
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=25.45 E-value=1.7e+02 Score=26.20 Aligned_cols=88 Identities=15% Similarity=0.072 Sum_probs=54.7
Q ss_pred HHHHHHhhh---hCCCceEEEEeeCCc----hhHHHHHHHHHCCCCEEEEEee----------CC--------CC--CHH
Q 025565 43 LEEALRIKE---SGLASEVVAVSMGPA----QCVDTLRTGLAMGADRGVHVEA----------AG--------QL--YPL 95 (251)
Q Consensus 43 le~A~~lae---~~~g~~V~al~~G~~----~~~~~l~~~la~GaD~vi~v~~----------~~--------~~--d~~ 95 (251)
+..|+.|+. + .|..|+..++|+- .....|.++-+.|+|--++-+- +. ++ .+-
T Consensus 76 ID~ai~LA~~~~~-~~~~vi~~TfGDm~RVPGs~~SL~~ara~GaDVRiVYSplDAl~iA~~nP~k~VVFfaiGFETTaP 154 (372)
T 2z1d_A 76 IVAMQLIMRKARE-EGEEIILTTFGDMYKIPTPMGSFADLKSEGFDVRIVYGIFDTYRIAKENPDKTVVHFSPGFETTTA 154 (372)
T ss_dssp HHHHHHHHHHHHH-TTCCEEEEECTTGGGCCCTTCCHHHHHHTTCEEEECSSHHHHHHHHHHCTTSEEEEEEEECHHHHH
T ss_pred HHHHHHHHhhhcc-cCCCeEEEeccccccCCCCCCCHHHHHhCCCCEEEEeCHHHHHHHHHHCCCCeEEEEeeChhhccH
Confidence 566666766 3 2457999999972 2344789999999985555441 11 12 344
Q ss_pred HHHHHHHHHHHHh--CCCEEEEcceeecCCcCcHHHHHHHHcCCCc
Q 025565 96 TVAKILKSLVEVE--KPGLIILGKQAIDDDCNQTGQMVAGLLSWPQ 139 (251)
Q Consensus 96 a~a~~La~~ik~~--~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~ 139 (251)
.+|.+|.++.++. ++. |++.+ ..++|-+...|+-|-
T Consensus 155 ~tA~~i~~a~~~~l~Nfs-vl~~h-------~l~pPa~~all~~~~ 192 (372)
T 2z1d_A 155 PAAGMLNVAAQEELENFK-IYSVH-------RLTPPAVEVLLKQGT 192 (372)
T ss_dssp HHHHHHHHHHHHTCSSEE-EEEEE-------ECHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHcCCCCEE-EEEec-------cccHHHHHHHHcCCC
Confidence 5555555655543 343 44434 349999999998774
No 352
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=25.43 E-value=2.8e+02 Score=22.66 Aligned_cols=74 Identities=14% Similarity=0.166 Sum_probs=45.1
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCch-hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcce
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQ-CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGKQ 118 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~-~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~~ 118 (251)
--.+.|.+|+++ |.+|+++.-.... .++..+++...|.+ +..+..| -.|...+...+.++.++. +.|+++.-..
T Consensus 41 IG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag 116 (283)
T 1g0o_A 41 IGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSD-AACVKAN-VGVVEDIVRMFEEAVKIFGKLDIVCSNSG 116 (283)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHHhCCC-eEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 345677788875 6787776555432 22333444556655 3334333 457777777777777766 6898886553
No 353
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=25.34 E-value=1.1e+02 Score=26.61 Aligned_cols=69 Identities=12% Similarity=0.022 Sum_probs=40.4
Q ss_pred HHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeC----C------CC---CHHHHHHHHHHHHHHhC
Q 025565 43 LEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAA----G------QL---YPLTVAKILKSLVEVEK 109 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~----~------~~---d~~a~a~~La~~ik~~~ 109 (251)
..+.++.+.+ .|-.-++.++.+ +..+...+.|+|-+ .++-+ . .. +...+.+.+.+++++.+
T Consensus 152 eve~I~~A~~-~gL~Ti~~v~~~----eeA~amA~agpDiI-~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vn 225 (286)
T 2p10_A 152 EVEMIAEAHK-LDLLTTPYVFSP----EDAVAMAKAGADIL-VCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIR 225 (286)
T ss_dssp HHHHHHHHHH-TTCEECCEECSH----HHHHHHHHHTCSEE-EEECSCC---------CCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHH-CCCeEEEecCCH----HHHHHHHHcCCCEE-EECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhC
Confidence 4455566655 464434444443 34556667899954 44422 1 11 22457788888999999
Q ss_pred CC-EEEEcc
Q 025565 110 PG-LIILGK 117 (251)
Q Consensus 110 ~d-lIl~G~ 117 (251)
|| +|||+.
T Consensus 226 pdvivLc~g 234 (286)
T 2p10_A 226 DDIIILSHG 234 (286)
T ss_dssp SCCEEEEES
T ss_pred CCcEEEecC
Confidence 99 556665
No 354
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=25.24 E-value=3.4e+02 Score=23.59 Aligned_cols=87 Identities=23% Similarity=0.189 Sum_probs=54.3
Q ss_pred HHHHHHhhhhCCCceEEEE-eeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHH-hCCCEEEEcceee
Q 025565 43 LEEALRIKESGLASEVVAV-SMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEV-EKPGLIILGKQAI 120 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al-~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~-~~~dlIl~G~~s~ 120 (251)
+...+.-+.. .. .+..+ +||...--=++..+++-|||-+++=+ ..++.+.+.+.|.+..++ .++.+|++....
T Consensus 150 id~i~~ta~s-~~-rv~iVEvMGR~aG~lAl~a~lA~ga~~iliPE--~~~~~~~i~~~i~~~~~~gk~~~iIvvaEG~- 224 (319)
T 1zxx_A 150 IDKIRDTASS-HH-RVFIVNVMGRNCGDIAMRVGVACGADAIVIPE--RPYDVEEIANRLKQAQESGKDHGLVVVAEGV- 224 (319)
T ss_dssp HHHHHHHHHH-TT-CEEEEEECCTTCCHHHHHHHHHTTCSEEECTT--SCCCHHHHHHHHHHHHHTTCCCEEEEEETTT-
T ss_pred HHHHHHHHhc-CC-CEEEEEeCCCCHHHHHHHHHHhcCCCEEEeCC--CCCCHHHHHHHHHHHHHcCCCcEEEEEeCCc-
Confidence 3333444444 33 56555 79976433467788899999777622 257888887877777654 578899998765
Q ss_pred cCCcCcHHHHHHHHc
Q 025565 121 DDDCNQTGQMVAGLL 135 (251)
Q Consensus 121 d~~~~~v~~~lA~~L 135 (251)
+++..++-.+.+++
T Consensus 225 -~~~~~l~~~i~~~~ 238 (319)
T 1zxx_A 225 -MTADQFMAELKKYG 238 (319)
T ss_dssp -CCHHHHHHHHHHSS
T ss_pred -ChHHHHHHHHHHhh
Confidence 23344555555543
No 355
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=25.20 E-value=1.2e+02 Score=25.81 Aligned_cols=33 Identities=15% Similarity=0.315 Sum_probs=18.2
Q ss_pred CCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEe
Q 025565 54 LASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 54 ~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~ 87 (251)
.|.+|...-.|+- -.-++.-|.++|+..++.++
T Consensus 160 ~g~~VlV~GaG~v-G~~aiq~ak~~G~~~vi~~~ 192 (346)
T 4a2c_A 160 ENKNVIIIGAGTI-GLLAIQCAVALGAKSVTAID 192 (346)
T ss_dssp TTSEEEEECCSHH-HHHHHHHHHHTTCSEEEEEE
T ss_pred CCCEEEEECCCCc-chHHHHHHHHcCCcEEEEEe
Confidence 4545444333321 13345667778888877765
No 356
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=25.08 E-value=62 Score=25.61 Aligned_cols=41 Identities=12% Similarity=-0.018 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 96 TVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 96 a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
.++..|++.++..++|+|+.-. ..|-.++..+|..||.|++
T Consensus 40 ~l~~~la~~~~~~~~d~Iv~v~----~rG~~~a~~la~~l~~p~~ 80 (197)
T 1y0b_A 40 RIGDEFASRFAKDGITKIVTIE----SSGIAPAVMTGLKLGVPVV 80 (197)
T ss_dssp HHHHHHHHHTTTTTCCEEEEET----TTTHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHhhcCCCCEEEEEc----ccCHHHHHHHHHHhCCCEE
Confidence 3444444444444678877543 3445789999999999964
No 357
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=25.00 E-value=69 Score=25.21 Aligned_cols=42 Identities=17% Similarity=-0.059 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHH----hCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 95 LTVAKILKSLVEV----EKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 95 ~a~a~~La~~ik~----~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
...++.|++.+++ .++|+|++-. ..|-.++..+|..||+|+.
T Consensus 41 ~~~~~~La~~i~~~~~~~~~d~Iv~v~----~~G~~~a~~la~~l~~p~~ 86 (187)
T 1g2q_A 41 QKLIDAFKLHLEEAFPEVKIDYIVGLE----SRGFLFGPTLALALGVGFV 86 (187)
T ss_dssp HHHHHHHHHHHHHHCTTSCCCEEEEET----TTHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHhhhcccCCCCEEEEEc----cCcHHHHHHHHHHHCCCEE
Confidence 3556677777765 4688887542 2344799999999999976
No 358
>3vdp_A Recombination protein RECR; zinc finger, DNA repair, DNA binding; 2.45A {Thermoanaerobacter tengcongensis} PDB: 3vdu_A 3ve5_D
Probab=24.92 E-value=1.5e+02 Score=24.42 Aligned_cols=70 Identities=13% Similarity=0.115 Sum_probs=48.3
Q ss_pred CCCHHhHHHHHHHHHhhhhCCCceEEEEe--------eCCch--hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHH
Q 025565 34 SMNPFCEIALEEALRIKESGLASEVVAVS--------MGPAQ--CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKS 103 (251)
Q Consensus 34 ~in~~d~~Ale~A~~lae~~~g~~V~al~--------~G~~~--~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~ 103 (251)
+=+|.|..|+|.+...+ |.-.++- +||++ .+..++....-++.++|+..++ ..+.++||.-|++
T Consensus 99 VE~~~Dv~aiE~t~~y~-----G~YhVLgG~iSPldGigP~~L~i~~L~~Ri~~~~v~EVIlAtnp-TvEGeaTa~Yi~~ 172 (212)
T 3vdp_A 99 VSHPMDVVAMEKVKEYK-----GVYHVLHGVISPIEGVGPEDIRIKELLERVRDGSVKEVILATNP-DIEGEATAMYIAK 172 (212)
T ss_dssp ESSHHHHHHHHTTSCCC-----EEEEECSSCCBTTTTBCGGGTTHHHHHHHHHHSCCSEEEECCCS-SHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHhhCccc-----eEEEecCCccCccCCCCccccCHHHHHHHHhcCCCcEEEEECCC-CccHHHHHHHHHH
Confidence 44899999998864332 3333332 35543 4556666667789999998754 5678899999999
Q ss_pred HHHHhC
Q 025565 104 LVEVEK 109 (251)
Q Consensus 104 ~ik~~~ 109 (251)
.++..+
T Consensus 173 ~Lk~~~ 178 (212)
T 3vdp_A 173 LLKPFG 178 (212)
T ss_dssp HHTTTT
T ss_pred HhhhcC
Confidence 998643
No 359
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=24.91 E-value=1.4e+02 Score=22.16 Aligned_cols=59 Identities=12% Similarity=0.137 Sum_probs=37.4
Q ss_pred HHHHHHHhhhh--CCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHH
Q 025565 42 ALEEALRIKES--GLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVE 106 (251)
Q Consensus 42 Ale~A~~lae~--~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik 106 (251)
.++...+|+.. .....|+.+|.-.. .+...+++..|++.- +.. .+++...-..|.++++
T Consensus 72 G~el~~~ir~~~~~~~ipvI~lTa~~~--~~~~~~~~~~Ga~~y-l~K---P~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 72 GIDLLKNIRADEELKHLPVLMITAEAK--REQIIEAAQAGVNGY-IVK---PFTAATLKEKLDKIFE 132 (134)
T ss_dssp HHHHHHHHHHSTTTTTCCEEEEESSCC--HHHHHHHHHTTCCEE-EES---SCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCCCCCCeEEEEECCCC--HHHHHHHHHCCCCEE-EEC---CCCHHHHHHHHHHHHh
Confidence 35566666643 13445777775543 466788999999964 333 5677777777766654
No 360
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=24.88 E-value=1.8e+02 Score=20.36 Aligned_cols=60 Identities=10% Similarity=0.084 Sum_probs=39.2
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHH
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEV 107 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~ 107 (251)
.++...+|++..+...+++++-... .+...+++..|++..+. . .++...+...|..+++.
T Consensus 64 g~~~~~~l~~~~~~~~ii~ls~~~~--~~~~~~~~~~g~~~~l~-k---p~~~~~l~~~l~~~~~~ 123 (143)
T 3jte_A 64 GMDILREIKKITPHMAVIILTGHGD--LDNAILAMKEGAFEYLR-K---PVTAQDLSIAINNAINR 123 (143)
T ss_dssp HHHHHHHHHHHCTTCEEEEEECTTC--HHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEEECCCC--HHHHHHHHHhCcceeEe-C---CCCHHHHHHHHHHHHHH
Confidence 4555666666544556665554432 46678899999997544 2 46777788888777764
No 361
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=24.82 E-value=1.1e+02 Score=26.41 Aligned_cols=18 Identities=17% Similarity=0.189 Sum_probs=11.7
Q ss_pred HHHHHHHHHCCCCEEEEEe
Q 025565 69 VDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 69 ~~~l~~~la~GaD~vi~v~ 87 (251)
..+++-+.++|+ +++.+.
T Consensus 182 ~~~~~~a~~~Ga-~Vi~~~ 199 (353)
T 4dup_A 182 TTAIQLARAFGA-EVYATA 199 (353)
T ss_dssp HHHHHHHHHTTC-EEEEEE
T ss_pred HHHHHHHHHcCC-EEEEEe
Confidence 335566777888 576665
No 362
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=24.79 E-value=1.7e+02 Score=25.81 Aligned_cols=31 Identities=13% Similarity=0.034 Sum_probs=25.9
Q ss_pred CCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 109 KPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 109 ~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
+.|+|+++.++ |...-..+.+++.+||++-.
T Consensus 102 dId~li~~t~t-~~~~p~~a~~v~~~LGl~~~ 132 (379)
T 3euo_A 102 QITHMVSTTCT-DSANPGYDHYVAKELGLSDR 132 (379)
T ss_dssp GCCEEEEECSS-CCCSSCHHHHHHHHHTCCTT
T ss_pred HCCEEEEEecC-CCCCCCHHHHHHHHcCCCCC
Confidence 46999999887 77777899999999998753
No 363
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=24.78 E-value=2.2e+02 Score=21.22 Aligned_cols=78 Identities=12% Similarity=0.009 Sum_probs=46.9
Q ss_pred hHHHHHHHHHhhhhCCCce-EEE-EeeCCchhHHHHHHHHHCCCCEEEEEeeCCC-CCHHHHHHHHHHHHHHhCCCEEEE
Q 025565 39 CEIALEEALRIKESGLASE-VVA-VSMGPAQCVDTLRTGLAMGADRGVHVEAAGQ-LYPLTVAKILKSLVEVEKPGLIIL 115 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~-V~a-l~~G~~~~~~~l~~~la~GaD~vi~v~~~~~-~d~~a~a~~La~~ik~~~~dlIl~ 115 (251)
....|+.+.+..+. .|.+ +.. +..|+ .++..++.+-..++|-++.=..... +........-..+++.-...++++
T Consensus 79 ~~~~l~~~~~~~~~-~gv~~v~~~v~~G~-~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a~~PVlvV 156 (163)
T 1tq8_A 79 IYEILHDAKERAHN-AGAKNVEERPIVGA-PVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIV 156 (163)
T ss_dssp HHHHHHHHHHHHHT-TTCCEEEEEEECSS-HHHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHH-cCCCeEEEEEecCC-HHHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhCCCCEEEE
Confidence 44567776666655 4555 544 44554 4577778788899998777553222 122233344456667667788887
Q ss_pred cce
Q 025565 116 GKQ 118 (251)
Q Consensus 116 G~~ 118 (251)
...
T Consensus 157 ~~~ 159 (163)
T 1tq8_A 157 HTT 159 (163)
T ss_dssp CCC
T ss_pred eCC
Confidence 653
No 364
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=24.76 E-value=1e+02 Score=26.37 Aligned_cols=53 Identities=21% Similarity=0.303 Sum_probs=36.5
Q ss_pred chhHHHHHHHHHCCCCEEE-EEeeCC---CCCHHHHHHHHHHHHHHhCCCEEEEccee
Q 025565 66 AQCVDTLRTGLAMGADRGV-HVEAAG---QLYPLTVAKILKSLVEVEKPGLIILGKQA 119 (251)
Q Consensus 66 ~~~~~~l~~~la~GaD~vi-~v~~~~---~~d~~a~a~~La~~ik~~~~dlIl~G~~s 119 (251)
++..+...+|...||.-++ |+.|+. ..|++.|..++..+ ++.-||+|+--.+.
T Consensus 30 eEia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~I-R~~~pd~ii~~Ttg 86 (275)
T 3no5_A 30 SEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGI-RKHAPGMITQVSTG 86 (275)
T ss_dssp HHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHH-HHHSTTCEEEECCC
T ss_pred HHHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHH-HHhCCCeEEEeCCC
Confidence 3344566778888998665 455543 36999999999774 54458988865543
No 365
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=24.71 E-value=1.5e+02 Score=24.01 Aligned_cols=68 Identities=12% Similarity=0.122 Sum_probs=39.9
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHH-CCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLA-MGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la-~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.-.++. +.+..+ ... ++..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 25 G~~ia~~l~~~--G~~V~~~~r~~~~----~~~~~~~~~~-~~~~~~~D-~~d~~~v~~~~~~~~~~~g~iD~lv~~A 94 (263)
T 3ak4_A 25 GAAIARALDKA--GATVAIADLDVMA----AQAVVAGLEN-GGFAVEVD-VTKRASVDAAMQKAIDALGGFDLLCANA 94 (263)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHH----HHHHHHTCTT-CCEEEECC-TTCHHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHH----HHHHHHHHhc-CCeEEEEe-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 45667777775 6677766554322 222222 221 34444433 457777777777777776 689888654
No 366
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=24.68 E-value=1.5e+02 Score=23.12 Aligned_cols=43 Identities=14% Similarity=0.238 Sum_probs=22.3
Q ss_pred HHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCC-CCEEEEEe
Q 025565 43 LEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMG-ADRGVHVE 87 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~G-aD~vi~v~ 87 (251)
.+.+.++++. |.+|.++.+|+..-.+.|+.....| -.++|.+.
T Consensus 136 ~~~a~~l~~~--gi~i~~igvG~~~~~~~L~~iA~~~~~~~~~~~~ 179 (202)
T 1ijb_A 136 VRYVQGLKKK--KVIVIPVGIGPHANLKQIRLIEKQAPENKAFVLS 179 (202)
T ss_dssp HHHHHHHHHT--TEEEEEEEESTTSCHHHHHHHHHHCTTCCCEEES
T ss_pred HHHHHHHHHC--CCEEEEEecCCcCCHHHHHHHhCCCCcccEEEeC
Confidence 3444555553 5666777777532234555544433 34556554
No 367
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=24.44 E-value=2.9e+02 Score=22.64 Aligned_cols=72 Identities=14% Similarity=0.069 Sum_probs=46.8
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCc-------hhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEE
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPA-------QCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLI 113 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~-------~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlI 113 (251)
..+.|++|+++ |.+|+.+.-..+ ..++..++.-..|. ++..+..| -.|...+.+.+.++.++. +.|++
T Consensus 22 G~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~l 97 (285)
T 3sc4_A 22 GLAIAKRVAAD--GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGD-IRDGDAVAAAVAKTVEQFGGIDIC 97 (285)
T ss_dssp HHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECC-TTSHHHHHHHHHHHHHHHSCCSEE
T ss_pred HHHHHHHHHHC--CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECC-CCCHHHHHHHHHHHHHHcCCCCEE
Confidence 35677888875 678877766554 23444555555565 45555433 557888888888887776 68988
Q ss_pred EEcc
Q 025565 114 ILGK 117 (251)
Q Consensus 114 l~G~ 117 (251)
+...
T Consensus 98 vnnA 101 (285)
T 3sc4_A 98 VNNA 101 (285)
T ss_dssp EECC
T ss_pred EECC
Confidence 8654
No 368
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=24.41 E-value=2.8e+02 Score=23.81 Aligned_cols=25 Identities=16% Similarity=0.030 Sum_probs=16.5
Q ss_pred CCCEEEEcceeecCCcCcHHHHHHHHcCCCccc
Q 025565 109 KPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGT 141 (251)
Q Consensus 109 ~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 141 (251)
..|+++...+ =+..+|..+|.|.++
T Consensus 261 ~a~~~i~~Ds--------G~~HlAaa~g~P~v~ 285 (349)
T 3tov_A 261 RCNLLITNDS--------GPMHVGISQGVPIVA 285 (349)
T ss_dssp TCSEEEEESS--------HHHHHHHTTTCCEEE
T ss_pred hCCEEEECCC--------CHHHHHHhcCCCEEE
Confidence 4677765442 356678888888763
No 369
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=24.32 E-value=85 Score=29.25 Aligned_cols=46 Identities=9% Similarity=0.205 Sum_probs=29.9
Q ss_pred HHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceee
Q 025565 69 VDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAI 120 (251)
Q Consensus 69 ~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~ 120 (251)
.+.++++-+.|+|-+|++.+.. . ..-..||+.+ .+.|+||.|++-.
T Consensus 198 ~~~v~~l~~~g~D~iI~l~H~g-~---~~d~~la~~~--~giDlIlgGHtH~ 243 (546)
T 4h2g_A 198 QPEVDKLKTLNVNKIIALGHSG-F---EMDKLIAQKV--RGVDVVVGGHSNT 243 (546)
T ss_dssp HHHHHHHHHTTCCCEEEEEESC-H---HHHHHHHHHS--TTCCEEECCSSCC
T ss_pred HHHHHHHHhcCCCEEEEEeccC-c---cchHHHHHhC--CCCcEEEeCCcCc
Confidence 4455566667999999998642 1 1223444433 3799999999753
No 370
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=24.27 E-value=64 Score=23.80 Aligned_cols=34 Identities=9% Similarity=0.078 Sum_probs=19.3
Q ss_pred HHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCc
Q 025565 105 VEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQ 139 (251)
Q Consensus 105 ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~ 139 (251)
+++..||+||+=-.-.+.+|-++.-++-. .++|+
T Consensus 49 ~~~~~~DlvllDi~mP~~~G~el~~~lr~-~~ipv 82 (123)
T 2lpm_A 49 ARKGQFDIAIIDVNLDGEPSYPVADILAE-RNVPF 82 (123)
T ss_dssp HHHCCSSEEEECSSSSSCCSHHHHHHHHH-TCCSS
T ss_pred HHhCCCCEEEEecCCCCCCHHHHHHHHHc-CCCCE
Confidence 34456777776666555565555555543 35553
No 371
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=24.21 E-value=2.9e+02 Score=22.49 Aligned_cols=70 Identities=9% Similarity=-0.020 Sum_probs=41.3
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-..+.|++|+++ |.+|+.+.-..+..++..+ ..|.+ +..+..| -.|...+.+++.++.++. +.|+++.-.
T Consensus 39 IG~aia~~la~~--G~~V~~~~r~~~~~~~~~~---~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 109 (266)
T 3grp_A 39 IGEAIARCFHAQ--GAIVGLHGTREDKLKEIAA---DLGKD-VFVFSAN-LSDRKSIKQLAEVAEREMEGIDILVNNA 109 (266)
T ss_dssp HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH---HHCSS-EEEEECC-TTSHHHHHHHHHHHHHHHTSCCEEEECC
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HhCCc-eEEEEee-cCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 345677788875 6677655443322222222 23543 4444433 457788888887777776 689888654
No 372
>3saj_A Glutamate receptor 1; rossman fold, ION channel, membrane, transport protein; HET: NAG BMA MAN; 2.50A {Rattus norvegicus}
Probab=24.12 E-value=77 Score=27.33 Aligned_cols=47 Identities=11% Similarity=-0.247 Sum_probs=26.9
Q ss_pred CCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccc
Q 025565 92 LYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTF 142 (251)
Q Consensus 92 ~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 142 (251)
.|+...+.+..+++.+ +.+.|+-+.+|. .......++...++|+++.
T Consensus 51 ~d~~~a~~~~~~l~~~-~V~aiiG~~~S~---~~~a~~~~~~~~~iP~is~ 97 (384)
T 3saj_A 51 SDSFEMTYRFCSQFSK-GVYAIFGFYERR---TVNMLTSFCGALHVCFITP 97 (384)
T ss_dssp TCHHHHHHHHHHHHHT-TCSCEEECCCHH---HHHHHHHHHHHHTCCEEEC
T ss_pred CchhhHHHHHHHHHhc-CeEEEECCCCHH---HHHHHHHHhccCCCCeEec
Confidence 3666666666666654 566665554431 1233455667777777765
No 373
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=24.06 E-value=2.5e+02 Score=29.00 Aligned_cols=65 Identities=17% Similarity=0.102 Sum_probs=42.9
Q ss_pred hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHc
Q 025565 68 CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLL 135 (251)
Q Consensus 68 ~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~L 135 (251)
..+.++++..+|+|.+.+.+.-....|..+...+..+.+..+..+=+-.+ +..+-.++-.+|+..
T Consensus 711 ~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~i~~H~H---nd~GlAvAn~laAv~ 775 (1165)
T 2qf7_A 711 YTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREATGLPIHFHTH---DTSGIAAATVLAAVE 775 (1165)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHCSSCEEEEEC---BTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhcCCeEEEEEC---CCCCHHHHHHHHHHH
Confidence 45677889999999877776544678999988888877766433333333 334455666666543
No 374
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=24.01 E-value=4e+02 Score=24.08 Aligned_cols=90 Identities=16% Similarity=0.067 Sum_probs=51.2
Q ss_pred HHHHhhhhCCCceEEEEeeCC-----chhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEccee
Q 025565 45 EALRIKESGLASEVVAVSMGP-----AQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQA 119 (251)
Q Consensus 45 ~A~~lae~~~g~~V~al~~G~-----~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s 119 (251)
.+.+.+.. .|.+|..-..-. +...+.++.+..+|+|++.+.+.-....|..+...+..+.+..+ +.|--+.-
T Consensus 155 ~~v~~ak~-~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~--~~i~~H~H 231 (423)
T 3ivs_A 155 EVINFVKS-KGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVS--CDIECHFH 231 (423)
T ss_dssp HHHHHHHT-TTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCS--SEEEEEEB
T ss_pred HHHHHHHH-CCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcC--CeEEEEEC
Confidence 34444444 466665432211 12345678888999998777654445789998888877666544 33332333
Q ss_pred ecCCcCcHHHHHHH-HcCCC
Q 025565 120 IDDDCNQTGQMVAG-LLSWP 138 (251)
Q Consensus 120 ~d~~~~~v~~~lA~-~Lg~p 138 (251)
.| .+-.++-.+|+ ..|+-
T Consensus 232 nd-~GlAvAN~laAv~aGa~ 250 (423)
T 3ivs_A 232 ND-TGMAIANAYCALEAGAT 250 (423)
T ss_dssp CT-TSCHHHHHHHHHHTTCC
T ss_pred CC-CchHHHHHHHHHHhCCC
Confidence 33 44456665555 44443
No 375
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=23.62 E-value=1.4e+02 Score=25.79 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=18.8
Q ss_pred CCceEEEEeeCCchh-HHHHHHHHHCCCCEEEEEe
Q 025565 54 LASEVVAVSMGPAQC-VDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 54 ~g~~V~al~~G~~~~-~~~l~~~la~GaD~vi~v~ 87 (251)
.|.+|.+. |.... .-+++-|.++|+.+++.++
T Consensus 192 ~g~~VlV~--GaG~vG~~a~qla~~~Ga~~Vi~~~ 224 (374)
T 1cdo_A 192 PGSTCAVF--GLGAVGLAAVMGCHSAGAKRIIAVD 224 (374)
T ss_dssp TTCEEEEE--CCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEE--CCCHHHHHHHHHHHHcCCCEEEEEc
Confidence 45454443 43222 3345667778998888775
No 376
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=23.56 E-value=3.4e+02 Score=24.30 Aligned_cols=31 Identities=13% Similarity=0.082 Sum_probs=20.9
Q ss_pred HHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 101 LKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 101 La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
+.+.+++.+||+++.+... ...+.++|+|+.
T Consensus 386 l~~~i~~~~pDL~ig~~~~---------~~~~~r~G~P~~ 416 (460)
T 2xdq_A 386 QLQRIKALQPDLVITGMAH---------ANPLEARGISTK 416 (460)
T ss_dssp HHHHHHHHCCSEEEECHHH---------HHHHHTBTCCEE
T ss_pred HHHHHhccCCCEEEeCccc---------CceeeeccCcEE
Confidence 4566777899999955321 134677898864
No 377
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=23.53 E-value=1.7e+02 Score=23.81 Aligned_cols=68 Identities=15% Similarity=0.063 Sum_probs=40.9
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHH-CCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLA-MGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la-~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-.+.|.+|+++ |.+|+++.-.++ .+.++.+ .+ .++..+..| -.|...+...+.++.++. +.|+++.-.
T Consensus 19 G~aia~~l~~~--G~~V~~~~r~~~----~~~~~~~~~~-~~~~~~~~D-~~~~~~v~~~~~~~~~~~g~iD~lvnnA 88 (263)
T 2a4k_A 19 GRAALDLFARE--GASLVAVDREER----LLAEAVAALE-AEAIAVVAD-VSDPKAVEAVFAEALEEFGRLHGVAHFA 88 (263)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHH----HHHHHHHTCC-SSEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEEGG
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHH----HHHHHHHHhc-CceEEEEcC-CCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 34567778875 667776654432 2333222 23 345555433 457777778888877776 589888644
No 378
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=23.41 E-value=2.2e+02 Score=23.01 Aligned_cols=69 Identities=13% Similarity=0.092 Sum_probs=40.5
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|++|+++ |.+|+.+.-.++..++..++ +|. ++..+..| -.|...+...+.++.++. +.|+++.-.
T Consensus 21 G~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~---~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 90 (255)
T 4eso_A 21 GLATVRRLVEG--GAEVLLTGRNESNIARIREE---FGP-RVHALRSD-IADLNEIAVLGAAAGQTLGAIDLLHINA 90 (255)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHH---HGG-GEEEEECC-TTCHHHHHHHHHHHHHHHSSEEEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---hCC-cceEEEcc-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 34677788875 66777665544332222222 243 34444433 457777777777777766 588877644
No 379
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=23.37 E-value=3e+02 Score=22.36 Aligned_cols=72 Identities=7% Similarity=0.062 Sum_probs=44.1
Q ss_pred HHHHHHHhhhhCCCceEEEEeeC------------CchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-
Q 025565 42 ALEEALRIKESGLASEVVAVSMG------------PAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE- 108 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G------------~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~- 108 (251)
-.+.|.+|+++ |.+|+.+.-. .+..++.....-..|.. +..+..| -.|...+.+.+.++.++.
T Consensus 23 G~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~g 98 (281)
T 3s55_A 23 GRSHAVALAEA--GADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRR-CISAKVD-VKDRAALESFVAEAEDTLG 98 (281)
T ss_dssp HHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHC--CCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCe-EEEEeCC-CCCHHHHHHHHHHHHHhcC
Confidence 35677788875 6777766543 12223333444455644 4555433 457778888888777776
Q ss_pred CCCEEEEcc
Q 025565 109 KPGLIILGK 117 (251)
Q Consensus 109 ~~dlIl~G~ 117 (251)
+.|+++.-.
T Consensus 99 ~id~lv~nA 107 (281)
T 3s55_A 99 GIDIAITNA 107 (281)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 689888644
No 380
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=23.35 E-value=86 Score=28.99 Aligned_cols=46 Identities=7% Similarity=0.125 Sum_probs=30.4
Q ss_pred hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEccee
Q 025565 68 CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQA 119 (251)
Q Consensus 68 ~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s 119 (251)
+...+.++-+.|+|-+|.+.+- .++ ....||+.+. +.|+|+.|++-
T Consensus 175 ~~~~v~~Lr~~g~D~II~LsH~-G~~---~d~~la~~v~--giD~IlgGHsH 220 (530)
T 4h1s_A 175 LQPEVDKLKTLNVNKIIALGHS-GFE---MDKLIAQKVR--GVDVVVGGHSN 220 (530)
T ss_dssp HHHHHHHHHHTTCCCEEEEEES-CHH---HHHHHHHHST--TCCEEECCSSC
T ss_pred HHHHHhhhhhcCCCEEEEeccC-Cch---HHHHHHhcCC--CCCeeccCCcc
Confidence 3445666777899999999864 222 2234444332 79999999875
No 381
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=23.30 E-value=1.5e+02 Score=30.93 Aligned_cols=72 Identities=19% Similarity=0.134 Sum_probs=42.8
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
.+.++..++.+++. |.+++++.--+.......+ -+|+.+.+......+.+.-...|.+++++.++|+|+.|.
T Consensus 40 Geia~~iiraar~l--Gi~vVaV~s~~d~~a~~~~-----~ADe~~~i~p~~~~~syld~~~Il~~a~~~~iDaI~pg~ 111 (1236)
T 3va7_A 40 GEIAVRIMKTLKRM--GIKSVAVYSDPDKYSQHVT-----DADFSVALHGRTAAETYLDIDKIINAAKKTGAQAIIPGY 111 (1236)
T ss_dssp HHHHHHHHHHHHHH--TCEEEEEECSGGGGCHHHH-----HSSEEEECCCSSTTTTTTCHHHHHHHHHHTTCSEEECCS
T ss_pred CHHHHHHHHHHHHC--CCEEEEEEcCCCcCchhhh-----hCCEEEEeCCCcccccccCHHHHHHHHHHhCCCEEEECC
Confidence 44577777777774 7787777544432111111 269999885322222222234667778888999999764
No 382
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=23.28 E-value=90 Score=26.78 Aligned_cols=19 Identities=21% Similarity=0.073 Sum_probs=12.8
Q ss_pred HHHHHHHHHCCCCEEEEEe
Q 025565 69 VDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 69 ~~~l~~~la~GaD~vi~v~ 87 (251)
..+++-+.++|+.+++.+.
T Consensus 181 ~~~~q~a~~~Ga~~Vi~~~ 199 (348)
T 2d8a_A 181 LLGIAVAKASGAYPVIVSE 199 (348)
T ss_dssp HHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEEC
Confidence 3355667778987777664
No 383
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=23.12 E-value=81 Score=28.19 Aligned_cols=105 Identities=14% Similarity=0.033 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHhCCCEEEE-cceeecCCcCcHHHHHHHHcCCCcccceeeEEEecCCCeEEEEEEeCCeEEEEEE--C
Q 025565 95 LTVAKILKSLVEVEKPGLIIL-GKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLEL--D 171 (251)
Q Consensus 95 ~a~a~~La~~ik~~~~dlIl~-G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~l~~~R~~~gG~~~~~~--~ 171 (251)
......+.+.+++.++|+|+. |.-| ..+++-.+|.+++.|++.--+.-..+.|-+...+.-...+....... .
T Consensus 92 ~~~v~~~~~~~~~~~~d~IIavGGGs----~~D~AK~iA~~~~~p~i~IPTTagtgSevt~~avi~~~~~~~k~~~~~~~ 167 (387)
T 3uhj_A 92 TSEIERVRKVAIEHGSDILVGVGGGK----TADTAKIVAIDTGARIVIAPTIASTDAPCSAIAVRYTEHGVYEEALRLPR 167 (387)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESSHH----HHHHHHHHHHHTTCEEEECCSSCCCSTTTSSEEEEECTTSCEEEEEECSC
T ss_pred HHHHHHHHHHHhhcCCCEEEEeCCcH----HHHHHHHHHHhcCCCEEEecCcccCCcccCCeEEEEcCCCceEeeeecCC
Confidence 345556667777789998764 3322 23489999999999987554432222111222222222222222122 3
Q ss_pred CCEEEEEeCCCC--CCCCCChHHHHHhcCCCcee
Q 025565 172 LPAVITTDLRLN--QPRYATLPNIMKAKSKPIKK 203 (251)
Q Consensus 172 ~P~vvtv~~~~~--~pr~p~l~~i~~A~k~~i~~ 203 (251)
.|.++-+.+... -|+.-...+.+.|-++-+|.
T Consensus 168 ~P~~vi~Dp~l~~tlP~~~~aag~~Dal~ha~Ea 201 (387)
T 3uhj_A 168 NPDAVVVDSALVAAAPARFLVAGIGDALSTWFEA 201 (387)
T ss_dssp CCSEEEECHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEChHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 687777776543 23333444566665555543
No 384
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=23.10 E-value=54 Score=30.21 Aligned_cols=51 Identities=8% Similarity=-0.031 Sum_probs=29.6
Q ss_pred HHHHHHHHH-CCCCEEEEEeeCCCC-CHH-----HHHHHHHHHHHHhCCCEEEEccee
Q 025565 69 VDTLRTGLA-MGADRGVHVEAAGQL-YPL-----TVAKILKSLVEVEKPGLIILGKQA 119 (251)
Q Consensus 69 ~~~l~~~la-~GaD~vi~v~~~~~~-d~~-----a~a~~La~~ik~~~~dlIl~G~~s 119 (251)
.+.++++-+ -|+|-+|++.+.... +.. .....||+.+...++|+||+|++-
T Consensus 172 ~~~v~~l~~~~~~d~iI~l~H~g~~~~~~~~~~~~~~~~la~~~~~~~iDlilgGHtH 229 (516)
T 1hp1_A 172 KLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQ 229 (516)
T ss_dssp HHHHHHHHHHTCCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTTSSSEEECCSSC
T ss_pred HHHHHHHHhcCCCCEEEEEecCCccCCCcccccCchHHHHHHhCCCCceeEEECCCCC
Confidence 344555544 389999999864321 000 112345544443359999999975
No 385
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.03 E-value=3e+02 Score=22.23 Aligned_cols=73 Identities=15% Similarity=0.075 Sum_probs=43.3
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCC--CCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMG--ADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~G--aD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.-.++..++..+++...+ -.++..+..| -.|...+..++.++.++. +.|+++.-.
T Consensus 19 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~lv~~A 94 (278)
T 1spx_A 19 GRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVAD-VTTDAGQDEILSTTLGKFGKLDILVNNA 94 (278)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecc-cCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 34667788875 6788877655443333333332211 1234444433 457777778887777776 689888644
No 386
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=22.93 E-value=1.7e+02 Score=25.11 Aligned_cols=32 Identities=25% Similarity=0.211 Sum_probs=19.7
Q ss_pred CCceEEEEeeCCchh-HHHHHHHHHCCCCEEEEEe
Q 025565 54 LASEVVAVSMGPAQC-VDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 54 ~g~~V~al~~G~~~~-~~~l~~~la~GaD~vi~v~ 87 (251)
.|.+|... |.... .-+++-|.++|+.+++.++
T Consensus 179 ~g~~VlV~--GaG~vG~~aiqlak~~Ga~~Vi~~~ 211 (363)
T 3m6i_A 179 LGDPVLIC--GAGPIGLITMLCAKAAGACPLVITD 211 (363)
T ss_dssp TTCCEEEE--CCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCEEEEE--CCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 56555544 44222 3355667789998888775
No 387
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=22.82 E-value=4.2e+02 Score=24.29 Aligned_cols=65 Identities=11% Similarity=0.106 Sum_probs=43.4
Q ss_pred CceEEEEee--CC---chhHHHHHHHHHCCCCEEEEEeeCC--------------------C--C-CHHH-----HHHHH
Q 025565 55 ASEVVAVSM--GP---AQCVDTLRTGLAMGADRGVHVEAAG--------------------Q--L-YPLT-----VAKIL 101 (251)
Q Consensus 55 g~~V~al~~--G~---~~~~~~l~~~la~GaD~vi~v~~~~--------------------~--~-d~~a-----~a~~L 101 (251)
|.+|+++++ |. .+.+.+-+.|..+|+.+.+.++-.. . + .... ....+
T Consensus 34 G~eViavtvd~Gq~~~~ele~a~~~A~~lGi~~~~vvD~~eef~~~v~p~i~~na~y~~eg~rcY~l~t~~aRp~i~~~l 113 (455)
T 1k92_A 34 GAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTML 113 (455)
T ss_dssp TCEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEECHHHHHHHHHHHHHHTCCCCEETTEECCCHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEeChHHHHHHhHHHHHcCCcccccCceecccCCcchHHHHHHHH
Confidence 678999887 43 1345566778899997777665311 0 1 1111 24667
Q ss_pred HHHHHHhCCCEEEEccee
Q 025565 102 KSLVEVEKPGLIILGKQA 119 (251)
Q Consensus 102 a~~ik~~~~dlIl~G~~s 119 (251)
.+++++.++|.|..|++.
T Consensus 114 ~e~A~e~Gad~IAtGht~ 131 (455)
T 1k92_A 114 VAAMKEDGVNIWGDGSTY 131 (455)
T ss_dssp HHHHHHTTCCEEECCCCT
T ss_pred HHHHHHcCCCEEEECCcC
Confidence 788888899999999974
No 388
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=22.71 E-value=1.7e+02 Score=20.47 Aligned_cols=59 Identities=17% Similarity=0.225 Sum_probs=35.3
Q ss_pred HHHHHHHhhhh-CCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHH
Q 025565 42 ALEEALRIKES-GLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVE 106 (251)
Q Consensus 42 Ale~A~~lae~-~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik 106 (251)
.++...+|++. .....|+.++-... .+...+++..|++..+. . .++......+|.++++
T Consensus 67 G~~~~~~lr~~~~~~~~ii~lt~~~~--~~~~~~~~~~ga~~~l~-K---P~~~~~L~~~l~~~~~ 126 (133)
T 2r25_B 67 GLLSTKMIRRDLGYTSPIVALTAFAD--DSNIKECLESGMNGFLS-K---PIKRPKLKTILTEFCA 126 (133)
T ss_dssp HHHHHHHHHHHSCCCSCEEEEESCCS--HHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHHCT
T ss_pred hHHHHHHHHhhcCCCCCEEEEECCCC--HHHHHHHHHcCCCEEEe-C---CCCHHHHHHHHHHHHH
Confidence 35666667653 22345666554432 45677888999986443 2 4567766666666544
No 389
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=22.70 E-value=1.4e+02 Score=24.85 Aligned_cols=50 Identities=16% Similarity=0.061 Sum_probs=25.5
Q ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 91 QLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 91 ~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
..++......+.+++.+.+.+.|+.+..+.. ..-...++...++|+++..
T Consensus 51 ~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~---~~~~~~~~~~~~ip~v~~~ 100 (362)
T 3snr_A 51 GGDPTAATTNARRFVTESKADVIMGSSVTPP---SVAISNVANEAQIPHIALA 100 (362)
T ss_dssp TTCHHHHHHHHHHHHHTSCCSEEEECSSHHH---HHHHHHHHHHHTCCEEESS
T ss_pred CCCHHHHHHHHHHHHhccCceEEEcCCCcHH---HHHHHHHHHHcCccEEEec
Confidence 4455555555555555556776665433311 1122344555677766543
No 390
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=22.65 E-value=2.2e+02 Score=20.54 Aligned_cols=75 Identities=13% Similarity=0.151 Sum_probs=43.1
Q ss_pred CceEEEEeeCCch--hHHHHHHHHHCCCC-EEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHH
Q 025565 55 ASEVVAVSMGPAQ--CVDTLRTGLAMGAD-RGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMV 131 (251)
Q Consensus 55 g~~V~al~~G~~~--~~~~l~~~la~GaD-~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~l 131 (251)
|.+++.+++|... +.++++.+-+.|.+ .++.+..-..+|.. .|.++++ +.+.|++=... .+|+++..+
T Consensus 13 g~dv~iv~~Gs~~~~a~eA~~~L~~~Gi~v~vi~~r~~~P~d~~----~l~~~~~--~~~~vvvvE~~---~~G~l~~~i 83 (118)
T 3ju3_A 13 EADITFVTWGSQKGPILDVIEDLKEEGISANLLYLKMFSPFPTE----FVKNVLS--SANLVIDVESN---YTAQAAQMI 83 (118)
T ss_dssp SCSEEEEEEGGGHHHHHHHHHHHHHTTCCEEEEEECSSCSCCHH----HHHHHHT--TCSCCCCCCCC---CCCCHHHHH
T ss_pred CCCEEEEEECccHHHHHHHHHHHHHCCCceEEEEECeEecCCHH----HHHHHHc--CCCEEEEEECC---CCCcHHHHH
Confidence 5578888999742 34455556667765 34444322245554 3444454 34444444433 247899888
Q ss_pred HHHcCCC
Q 025565 132 AGLLSWP 138 (251)
Q Consensus 132 A~~Lg~p 138 (251)
...++..
T Consensus 84 ~~~~~~~ 90 (118)
T 3ju3_A 84 KLYTGID 90 (118)
T ss_dssp HHHHCCC
T ss_pred HHHcCCC
Confidence 8877764
No 391
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=22.62 E-value=57 Score=29.76 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=31.6
Q ss_pred CCCEEEEcceeecCCcCcHHHHHHHHcCCCcccceeeEEE
Q 025565 109 KPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVL 148 (251)
Q Consensus 109 ~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~ 148 (251)
+-|+|+++.+|.+.....++..+..+||.+-.+++..+++
T Consensus 75 ~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~ 114 (460)
T 2wya_A 75 SVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDT 114 (460)
T ss_dssp GEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEE
T ss_pred HCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEech
Confidence 3578999998888888899999999998766666655554
No 392
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=22.58 E-value=1.4e+02 Score=23.51 Aligned_cols=49 Identities=16% Similarity=0.134 Sum_probs=23.3
Q ss_pred HHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCc
Q 025565 71 TLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDC 124 (251)
Q Consensus 71 ~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~ 124 (251)
++..+..+|++.+.+++-|..++-...++.|++ +||.|+|=..-+.|+|
T Consensus 39 A~~~l~~~G~~~i~v~~VPGafEiP~aak~la~-----~yDavIaLG~VIrG~T 87 (160)
T 2c92_A 39 ARKVAAGCGLDDPTVVRVLGAIEIPVVAQELAR-----NHDAVVALGVVIRGQT 87 (160)
T ss_dssp HHHHHHHTTCSCCEEEEESSGGGHHHHHHHHHT-----SCSEEEEEEEEECCSS
T ss_pred HHHHHHHcCCCceEEEECCcHHHHHHHHHHHHh-----cCCEEEEEeeeecCCc
Confidence 344555566654444444444443333444432 4666665444444444
No 393
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=22.43 E-value=1.5e+02 Score=25.92 Aligned_cols=32 Identities=16% Similarity=0.156 Sum_probs=19.2
Q ss_pred CCceEEEEeeCCchh-HHHHHHHHHCCCCEEEEEe
Q 025565 54 LASEVVAVSMGPAQC-VDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 54 ~g~~V~al~~G~~~~-~~~l~~~la~GaD~vi~v~ 87 (251)
.|.+|.+ +|.... .-+++-|.++|+.+++.++
T Consensus 185 ~g~~VlV--~GaG~vG~~aiqlAk~~Ga~~Vi~~~ 217 (398)
T 1kol_A 185 PGSTVYV--AGAGPVGLAAAASARLLGAAVVIVGD 217 (398)
T ss_dssp TTCEEEE--ECCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCEEEE--ECCcHHHHHHHHHHHHCCCCeEEEEc
Confidence 4555544 453222 3345667778999888875
No 394
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=22.37 E-value=1.4e+02 Score=26.71 Aligned_cols=70 Identities=14% Similarity=0.006 Sum_probs=39.2
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCC-CCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG-QLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~-~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
.++..++.+++. |.+++++.-.+....... .-+|+.+.+..+. ..+.+.-...|.+++++.++|+|+.|.
T Consensus 17 ~~~~i~~a~~~~--G~~vv~v~~~~~~~~~~~-----~~ad~~~~i~~~~~~~~~y~d~~~l~~~~~~~~id~v~~~~ 87 (461)
T 2dzd_A 17 IAIRVFRACTEL--GIRTVAIYSKEDVGSYHR-----YKADEAYLVGEGKKPIEAYLDIEGIIEIAKAHDVDAIHPGY 87 (461)
T ss_dssp HHHHHHHHHHHH--TCEEEEEECGGGTTCTHH-----HHSSSEEECSTTSCTTGGGTCHHHHHHHHHHTTCCEEECCS
T ss_pred HHHHHHHHHHHc--CCEEEEEECCcccccchh-----hhCCEEEEcCCCCCccccccCHHHHHHHHHHhCCCEEEECC
Confidence 455666666664 778887765432100111 1368888775321 111111135567778888999999875
No 395
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=22.36 E-value=2e+02 Score=19.96 Aligned_cols=59 Identities=14% Similarity=0.106 Sum_probs=36.4
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHH
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVE 106 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik 106 (251)
.++...+|++..+...|+.++--.. .+...+++..|++..+. . .+++......|..+.+
T Consensus 64 g~~~~~~l~~~~~~~~ii~ls~~~~--~~~~~~~~~~ga~~~l~-K---p~~~~~L~~~i~~~~~ 122 (133)
T 3b2n_A 64 GLEVLAEIRKKHLNIKVIIVTTFKR--PGYFEKAVVNDVDAYVL-K---ERSIEELVETINKVNN 122 (133)
T ss_dssp HHHHHHHHHHTTCSCEEEEEESCCC--HHHHHHHHHTTCSEEEE-T---TSCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCcEEEEecCCC--HHHHHHHHHcCCcEEEE-C---CCCHHHHHHHHHHHHc
Confidence 4556666766534556665554432 45677888999986543 2 4567776666666554
No 396
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=22.36 E-value=3.1e+02 Score=22.09 Aligned_cols=75 Identities=11% Similarity=-0.022 Sum_probs=45.9
Q ss_pred hHHHHHHHHHhhhhCCCceEEEEeeCC-chhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEc
Q 025565 39 CEIALEEALRIKESGLASEVVAVSMGP-AQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILG 116 (251)
Q Consensus 39 d~~Ale~A~~lae~~~g~~V~al~~G~-~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G 116 (251)
.--..+.|.+|+++ |.+|+++.--. ...++.++++.+.|.+- ..+..| -.|...+.+++.++.++. +.|+++..
T Consensus 36 ~gIG~~la~~l~~~--G~~v~i~~~r~~~~~~~~~~~l~~~~~~~-~~~~~D-l~~~~~~~~~~~~~~~~~g~id~li~n 111 (267)
T 4iiu_A 36 KGIGRAIARQLAAD--GFNIGVHYHRDAAGAQETLNAIVANGGNG-RLLSFD-VANREQCREVLEHEIAQHGAWYGVVSN 111 (267)
T ss_dssp SHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCE-EEEECC-TTCHHHHHHHHHHHHHHHCCCSEEEEC
T ss_pred ChHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCce-EEEEec-CCCHHHHHHHHHHHHHHhCCccEEEEC
Confidence 33445778888885 66775544332 22344555666666553 333323 457788888888777776 68988765
Q ss_pred c
Q 025565 117 K 117 (251)
Q Consensus 117 ~ 117 (251)
.
T Consensus 112 A 112 (267)
T 4iiu_A 112 A 112 (267)
T ss_dssp C
T ss_pred C
Confidence 4
No 397
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=22.32 E-value=1.5e+02 Score=24.94 Aligned_cols=70 Identities=16% Similarity=0.006 Sum_probs=43.7
Q ss_pred HHHHHHHCCCCEE-----EEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 71 TLRTGLAMGADRG-----VHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 71 ~l~~~la~GaD~v-----i~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
.....+.+.++++ -++..|...++......+.+++.+.+.+.|+.+..+.. ..-...++...++|+++..
T Consensus 46 ~~~~g~~~a~~~i~G~~i~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~---~~~~~~~~~~~~ip~v~~~ 120 (386)
T 3sg0_A 46 PQSKTVAALPKEIGGEKVTYFALDDESDPTKAAQNARKLLSEEKVDVLIGSSLTPV---SLPLIDIAAEAKTPLMTMA 120 (386)
T ss_dssp HHHHHGGGSCSEETTEEEEEEEEECTTCHHHHHHHHHHHHHTSCCSEEECCSSHHH---HHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHHcCCEEEEEEEecCCCCHHHHHHHHHHHHhhcCceEEECCCCchh---HHHHHHHHHhcCCeEEEec
Confidence 4566666777763 22222335677777777777777768999886544321 1233456778899988754
No 398
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=22.12 E-value=3.1e+02 Score=21.99 Aligned_cols=70 Identities=14% Similarity=0.046 Sum_probs=39.7
Q ss_pred HHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 43 LEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
.+.|.+|++.+.|..|+.+.-..+..+ .+.+. +| .++..+..| -.|.....+.+.++.++. ++|+++.-.
T Consensus 16 ~aia~~l~~~g~~~~v~~~~r~~~~~~-~~~~~--~~-~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lvnnA 86 (254)
T 3kzv_A 16 KSIVDVLFSLDKDTVVYGVARSEAPLK-KLKEK--YG-DRFFYVVGD-ITEDSVLKQLVNAAVKGHGKIDSLVANA 86 (254)
T ss_dssp HHHHHHHHHHCSSCEEEEEESCHHHHH-HHHHH--HG-GGEEEEESC-TTSHHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred HHHHHHHHhcCCCeEEEEecCCHHHHH-HHHHH--hC-CceEEEECC-CCCHHHHHHHHHHHHHhcCCccEEEECC
Confidence 456777887632445554433322222 22222 24 345555433 457888888888888776 689887654
No 399
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=22.09 E-value=3.2e+02 Score=22.20 Aligned_cols=71 Identities=15% Similarity=0.107 Sum_probs=41.9
Q ss_pred HhHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcc
Q 025565 38 FCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 38 ~d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
....+|-.+. ++...+.+|.+|.-..+++ ..++.|..+|..- +.++ ...+.. ..+.+.+++.+||+|++-.
T Consensus 20 snl~all~~~--~~~~~~~~I~~Vis~~~~a-~~l~~A~~~gIp~-~~~~-~~~~~~----~~~~~~L~~~~~Dlivlag 90 (215)
T 3kcq_A 20 SNLEALAKAF--STEESSVVISCVISNNAEA-RGLLIAQSYGIPT-FVVK-RKPLDI----EHISTVLREHDVDLVCLAG 90 (215)
T ss_dssp HHHHHHHHHT--CCC-CSEEEEEEEESCTTC-THHHHHHHTTCCE-EECC-BTTBCH----HHHHHHHHHTTCSEEEESS
T ss_pred HHHHHHHHHH--HcCCCCcEEEEEEeCCcch-HHHHHHHHcCCCE-EEeC-cccCCh----HHHHHHHHHhCCCEEEEeC
Confidence 3445554443 2211345787777655433 3467788899873 3333 223332 4666778888999999865
No 400
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=22.07 E-value=1.6e+02 Score=20.40 Aligned_cols=59 Identities=14% Similarity=0.142 Sum_probs=30.5
Q ss_pred HHHHHHhhhh-CCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHH
Q 025565 43 LEEALRIKES-GLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEV 107 (251)
Q Consensus 43 le~A~~lae~-~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~ 107 (251)
++...+|++. .....++.++-.+. .+...+++..|++..+. . .++.......|.+++++
T Consensus 64 ~~~~~~l~~~~~~~~~ii~ls~~~~--~~~~~~~~~~ga~~~l~-K---P~~~~~l~~~i~~~~~~ 123 (130)
T 1dz3_A 64 LAVLERIRAGFEHQPNVIMLTAFGQ--EDVTKKAVELGASYFIL-K---PFDMENLAHHIRQVYGK 123 (130)
T ss_dssp HHHHHHHHHHCSSCCEEEEEEETTC--HHHHHHHHHTTCEEEEE-C---SSCCTTHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCCCcEEEEecCCC--HHHHHHHHHcCCCEEEe-C---CCCHHHHHHHHHHHhcC
Confidence 4444555543 13334555544332 45567788888875433 2 23444555666665554
No 401
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=22.01 E-value=1.8e+02 Score=25.87 Aligned_cols=7 Identities=14% Similarity=0.619 Sum_probs=5.0
Q ss_pred CCCEEEE
Q 025565 109 KPGLIIL 115 (251)
Q Consensus 109 ~~dlIl~ 115 (251)
++|+|+-
T Consensus 306 g~Dvvid 312 (447)
T 4a0s_A 306 EPDIVFE 312 (447)
T ss_dssp CCSEEEE
T ss_pred CceEEEE
Confidence 6788874
No 402
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=21.90 E-value=3.1e+02 Score=21.88 Aligned_cols=69 Identities=13% Similarity=0.152 Sum_probs=43.1
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCC-chhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGP-AQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~-~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
-.+.|.+|+++ |.+|+++.-.+ +..++ .+-..|. ++..+..| -.|...+..++.++.++. +.|+++.-.
T Consensus 20 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~---~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 90 (249)
T 2ew8_A 20 GRAIAERFAVE--GADIAIADLVPAPEAEA---AIRNLGR-RVLTVKCD-VSQPGDVEAFGKQVISTFGRCDILVNNA 90 (249)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSCCHHHHH---HHHHTTC-CEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEcCCchhHHHH---HHHhcCC-cEEEEEee-cCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 35677788875 67888776655 32222 2334554 45555433 457777777777777766 689888654
No 403
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=21.85 E-value=1.6e+02 Score=20.28 Aligned_cols=59 Identities=15% Similarity=0.213 Sum_probs=31.0
Q ss_pred HHHHHHHhhhhCC-CceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHH
Q 025565 42 ALEEALRIKESGL-ASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVE 106 (251)
Q Consensus 42 Ale~A~~lae~~~-g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik 106 (251)
.++...+|++... ...++.++-+. . .+...+++..|++..+. ..++.......|....+
T Consensus 65 g~~~~~~l~~~~~~~~~~ii~~~~~-~-~~~~~~~~~~g~~~~l~----kP~~~~~l~~~i~~~~~ 124 (132)
T 3lte_A 65 GLDVIRSLRQNKVANQPKILVVSGL-D-KAKLQQAVTEGADDYLE----KPFDNDALLDRIHDLVN 124 (132)
T ss_dssp HHHHHHHHHTTTCSSCCEEEEECCS-C-SHHHHHHHHHTCCEEEC----SSCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCccCCCeEEEEeCC-C-hHHHHHHHHhChHHHhh----CCCCHHHHHHHHHHHcC
Confidence 3555556665421 22333333332 2 23567788888886443 24566666666665544
No 404
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=21.81 E-value=2e+02 Score=23.74 Aligned_cols=26 Identities=8% Similarity=-0.037 Sum_probs=21.5
Q ss_pred eCCchhHHHHHHHHHCCCCEEEEEee
Q 025565 63 MGPAQCVDTLRTGLAMGADRGVHVEA 88 (251)
Q Consensus 63 ~G~~~~~~~l~~~la~GaD~vi~v~~ 88 (251)
++.++..++++++.+.|+++++++.-
T Consensus 62 ~~~P~i~~al~~l~~~G~~~ivV~Pl 87 (269)
T 2xvy_A 62 IAAPSPAEALAGMAEEGFTHVAVQSL 87 (269)
T ss_dssp CCCCCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHCCCCEEEEEec
Confidence 46677888999999999999988863
No 405
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=21.74 E-value=2.3e+02 Score=21.25 Aligned_cols=58 Identities=10% Similarity=0.070 Sum_probs=35.7
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHH
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLV 105 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~i 105 (251)
.++...+|++..+...|+.++--.. .+...+++..|++..+. . .+++......|..++
T Consensus 66 g~~~~~~l~~~~~~~~ii~lt~~~~--~~~~~~a~~~Ga~~~l~-K---P~~~~~L~~~i~~~~ 123 (184)
T 3rqi_A 66 GLSLIAPLCDLQPDARILVLTGYAS--IATAVQAVKDGADNYLA-K---PANVESILAALQTNA 123 (184)
T ss_dssp SHHHHHHHHHHCTTCEEEEEESSCC--HHHHHHHHHHTCSEEEE-S---SCCHHHHHHHTSTTH
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCCC--HHHHHHHHHhCHHHhee-C---CCCHHHHHHHHHHHH
Confidence 4556666776545556666665443 46678899999997554 2 345555555554443
No 406
>3hsy_A Glutamate receptor 2; ligand-gated ION channel, synapse, cell CELL membrane, endoplasmic reticulum, glycoprotein, ION TRA ionic channel; HET: NAG BMA; 1.75A {Rattus norvegicus} PDB: 3h5v_A* 3h5w_A 3o2j_A* 2wjw_A* 2wjx_A 3n6v_A
Probab=21.70 E-value=1.5e+02 Score=25.46 Aligned_cols=10 Identities=10% Similarity=-0.107 Sum_probs=4.9
Q ss_pred hHHHHHHHHH
Q 025565 39 CEIALEEALR 48 (251)
Q Consensus 39 d~~Ale~A~~ 48 (251)
.+.+++.|++
T Consensus 16 ~~~~~~lAv~ 25 (376)
T 3hsy_A 16 EYSAFRVGMV 25 (376)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3455555543
No 407
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=21.59 E-value=78 Score=29.11 Aligned_cols=69 Identities=13% Similarity=0.015 Sum_probs=45.8
Q ss_pred hHHHHHHHHHCCCCEEEEEe--eCC-----------CCCHHH---HHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHH
Q 025565 68 CVDTLRTGLAMGADRGVHVE--AAG-----------QLYPLT---VAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMV 131 (251)
Q Consensus 68 ~~~~l~~~la~GaD~vi~v~--~~~-----------~~d~~a---~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~l 131 (251)
.++.++.++..|+.+.-+.. ... ..+|.. .++.+++.++..++|+|+.... .+--++..+
T Consensus 259 ~~~~~~~l~~~~a~~~g~F~L~SG~~S~~y~D~~~l~~~p~~~~~l~~~la~~~~~~~~D~Ivg~~~----gGi~~A~~l 334 (453)
T 3qw4_B 259 SVELAKALVDSHCVRFGNFTLKSGKSSPIYIDLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPY----AALPIASAI 334 (453)
T ss_dssp CHHHHHHHHHTTSEEESCCBCTTSSBCSEEECCGGGGGCHHHHHHHHHHHHHHHTTSCCSEEEECTT----TTHHHHHHH
T ss_pred HHHHHHHHHHCCCCEECCEeccCCCcCCEEEechHhccCHHHHHHHHHHHHHHhccCCCCEEEeccC----CcHHHHHHH
Confidence 35678888888987654332 110 124443 4556666666668999887664 334689999
Q ss_pred HHHcCCCcc
Q 025565 132 AGLLSWPQG 140 (251)
Q Consensus 132 A~~Lg~p~v 140 (251)
|..||.|++
T Consensus 335 A~~L~~p~~ 343 (453)
T 3qw4_B 335 SNEMNVPLI 343 (453)
T ss_dssp HHHHCCCEE
T ss_pred HHHhCCCEE
Confidence 999999975
No 408
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=21.53 E-value=3.4e+02 Score=22.23 Aligned_cols=43 Identities=14% Similarity=0.088 Sum_probs=26.7
Q ss_pred hHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEE
Q 025565 68 CVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIIL 115 (251)
Q Consensus 68 ~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~ 115 (251)
..+.++.++..|||++++=+ ....+|. .+.+++++++.+-|++
T Consensus 86 s~e~~~~~l~~GadkVii~t-~a~~~p~----li~e~~~~~g~q~iv~ 128 (243)
T 4gj1_A 86 SKEEVKALLDCGVKRVVIGS-MAIKDAT----LCLEILKEFGSEAIVL 128 (243)
T ss_dssp CHHHHHHHHHTTCSEEEECT-TTTTCHH----HHHHHHHHHCTTTEEE
T ss_pred cHHHHHHHHHcCCCEEEEcc-ccccCCc----hHHHHHhcccCceEEE
Confidence 35677888899999988743 2234665 3445566666554443
No 409
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=21.52 E-value=2e+02 Score=26.33 Aligned_cols=31 Identities=13% Similarity=0.034 Sum_probs=25.5
Q ss_pred CCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 109 KPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 109 ~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
+.|+|+++.++ |...-.++.+++.+||++-.
T Consensus 131 dId~li~~t~t-~~~~P~~a~~v~~~LGl~~~ 161 (465)
T 3e1h_A 131 QITHMVSTTCT-DSANPGYDHYVAKELGLSDR 161 (465)
T ss_dssp GCCEEEEECSS-CCCSSCHHHHHHHHHTCCTT
T ss_pred HCCEEEEEeeC-CCCCCcHHHHHHHHhCCCCC
Confidence 47899999877 76777889999999998753
No 410
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=21.48 E-value=80 Score=28.24 Aligned_cols=124 Identities=18% Similarity=0.149 Sum_probs=63.0
Q ss_pred HHHHH-HCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEE-Ecc-eeecCCcCcHHHHHHHHc-------------
Q 025565 72 LRTGL-AMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLII-LGK-QAIDDDCNQTGQMVAGLL------------- 135 (251)
Q Consensus 72 l~~~l-a~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl-~G~-~s~d~~~~~v~~~lA~~L------------- 135 (251)
+.+.+ ..|.+- ....+-..--+......+.+.+++.++|+|+ +|. +..| ++-.+|..+
T Consensus 64 v~~~L~~~g~~~-~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsviD-----~AK~iA~~~~~~~~~~d~~~~~ 137 (407)
T 1vlj_A 64 VVDSLKKHGIEW-VEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSVVD-----SAKAVAAGALYEGDIWDAFIGK 137 (407)
T ss_dssp HHHHHHHTTCEE-EEECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHHHH-----HHHHHHHHTTCSSCGGGGGGTS
T ss_pred HHHHHHHcCCeE-EEecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChhHHH-----HHHHHHHHHhCCCCHHHHhccc
Confidence 44444 456643 3333211122445566666777888999888 554 3444 777788763
Q ss_pred -----CCCcccceeeEEEecC-CCeEEEEEEeCCeEEEEEE--CCCEEEEEeCCCCC--CCCCChHHHHHhcCCCc
Q 025565 136 -----SWPQGTFASKVVLDKE-KQLAMVEREVDGGLETLEL--DLPAVITTDLRLNQ--PRYATLPNIMKAKSKPI 201 (251)
Q Consensus 136 -----g~p~vt~v~~l~~~~~-~~~l~~~R~~~gG~~~~~~--~~P~vvtv~~~~~~--pr~p~l~~i~~A~k~~i 201 (251)
+.|++.--+-.-.+.| ++.-.++.+..+.+..+.- -.|.++-+.+.... |+.-...+.+.|-+.-+
T Consensus 138 ~~~~~~~p~i~IPTTagtgSevt~~avi~~~~~~~K~~i~~~~~~P~~ai~Dp~l~~tlP~~~~aag~~Dal~hai 213 (407)
T 1vlj_A 138 YQIEKALPIFDVLTISATGTEMNGNAVITNEKTKEKYGVSSKALYPKVSIIDPSVQFTLPKEQTVYGAVDAISHIL 213 (407)
T ss_dssp CCCCCCCCEEEEECSCSSCGGGSSEEEEEETTTTEEEEEECGGGSCSEEEECGGGGGGSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCEEEEeCCCCcchhhcCeEEEEECCCCeEEEecCCCccceEEEEChHHhcCCCHHHHHHHHHHHHHHHH
Confidence 5665533222211111 2333344333334554443 26888888776543 33333444555555444
No 411
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=21.36 E-value=1e+02 Score=28.94 Aligned_cols=45 Identities=13% Similarity=0.069 Sum_probs=29.4
Q ss_pred HHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEccee
Q 025565 69 VDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQA 119 (251)
Q Consensus 69 ~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s 119 (251)
...++++-+.|+|-+|++.+.. ++ ....||+.+ -+.|+||.|++-
T Consensus 184 ~~~v~~lk~~g~d~iI~l~H~G-~~---~d~~la~~~--~giDlIlgGHtH 228 (579)
T 3ztv_A 184 QIMANALKQQGINKIILLSHAG-SE---KNIEIAQKV--NDIDVIVTGDSH 228 (579)
T ss_dssp HHHHHHHHTTTCCCEEEEEETC-HH---HHHHHHHHC--SSCCEEEECSSC
T ss_pred HHHHHHHHhCCCCEEEEEeccC-ch---hhHHHHHhC--CCCCEEEeCCCC
Confidence 4456666678999999998642 21 123444333 279999999964
No 412
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=21.33 E-value=3.3e+02 Score=22.03 Aligned_cols=69 Identities=7% Similarity=0.011 Sum_probs=42.2
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
....|.+|+++ |.+|+++.-..+..++... .+|. ++..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 18 G~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~---~~~~-~~~~~~~D-v~~~~~~~~~~~~~~~~~g~id~lv~~A 87 (281)
T 3m1a_A 18 GRAIAEAAVAA--GDTVIGTARRTEALDDLVA---AYPD-RAEAISLD-VTDGERIDVVAADVLARYGRVDVLVNNA 87 (281)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSGGGGHHHHH---HCTT-TEEEEECC-TTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---hccC-CceEEEee-CCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 34567778875 6788777655543333222 2333 34444433 457778888888777776 689888654
No 413
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=21.32 E-value=1.4e+02 Score=25.68 Aligned_cols=87 Identities=9% Similarity=0.035 Sum_probs=50.6
Q ss_pred HHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCC-CEEEEcceeec
Q 025565 43 LEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKP-GLIILGKQAID 121 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~-dlIl~G~~s~d 121 (251)
+-....|++.+++.+++.++--. ..+.++. .-++|+++.++..........-..+...+++.+| |+++-=..+
T Consensus 26 ~P~l~~L~~~~P~a~I~~l~~~~--~~~l~~~--~p~vd~vi~~~~~~~~~~~~~~~~l~~~Lr~~~y~D~vidl~~~-- 99 (349)
T 3tov_A 26 TPFLEVLRKAAPHSHITYVIDEK--LQQVMEY--NPNIDELIVVDKKGRHNSISGLNEVAREINAKGKTDIVINLHPN-- 99 (349)
T ss_dssp HHHHHHHHHHCTTSEEEEEEEGG--GGGGTSS--CTTCSEEEEECCSSHHHHHHHHHHHHHHHHHHCCCCEEEECCCS--
T ss_pred HHHHHHHHHHCCCCEEEEEECcc--hhHHHhc--CCCccEEEEeCcccccccHHHHHHHHHHHhhCCCCeEEEECCCC--
Confidence 44556677777888888766543 2333322 1368999988632111111112234556777799 999964432
Q ss_pred CCcCcHHHHHHHHcCCCc
Q 025565 122 DDCNQTGQMVAGLLSWPQ 139 (251)
Q Consensus 122 ~~~~~v~~~lA~~Lg~p~ 139 (251)
.-...++...|++.
T Consensus 100 ----~rs~~l~~~~~a~~ 113 (349)
T 3tov_A 100 ----ERTSYLAWKIHAPI 113 (349)
T ss_dssp ----HHHHHHHHHHCCSE
T ss_pred ----hHHHHHHHHhCCCe
Confidence 23556777888774
No 414
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=21.28 E-value=1.1e+02 Score=25.83 Aligned_cols=51 Identities=12% Similarity=-0.016 Sum_probs=33.2
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcccce
Q 025565 90 GQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 90 ~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
...++.....+..+++.+.+.++|+.+.+|.. ..-...++...++|+++..
T Consensus 56 ~~~~p~~a~~~a~~li~~~~v~~i~g~~~s~~---~~a~~~~~~~~~vp~i~~~ 106 (353)
T 4gnr_A 56 NKSETAEAASVTTNLVTQSKVSAVVGPATSGA---TAAAVANATKAGVPLISPS 106 (353)
T ss_dssp CTTCHHHHHHHHHHHHHTSCCSEEECCCSHHH---HHHHHHHHHHTTCCEEESS
T ss_pred CCCCHHHHHHHHHHHHhhCCceEEeccccCcc---cceehhhhhccCcceEeec
Confidence 35677777777777777666777766554422 2234567788888888654
No 415
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=21.22 E-value=79 Score=27.46 Aligned_cols=32 Identities=22% Similarity=0.178 Sum_probs=18.2
Q ss_pred CCceEEEEeeCCchh-HHHHHHHHHCCCCEEEEEe
Q 025565 54 LASEVVAVSMGPAQC-VDTLRTGLAMGADRGVHVE 87 (251)
Q Consensus 54 ~g~~V~al~~G~~~~-~~~l~~~la~GaD~vi~v~ 87 (251)
.|.+|.++ |.... .-+++-|.++|+.+++.++
T Consensus 191 ~g~~VlV~--GaG~vG~~aiqlak~~Ga~~Vi~~~ 223 (373)
T 1p0f_A 191 PGSTCAVF--GLGGVGFSAIVGCKAAGASRIIGVG 223 (373)
T ss_dssp TTCEEEEE--CCSHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCCEEEEE--CCCHHHHHHHHHHHHcCCCeEEEEC
Confidence 45555444 43222 2345556678988888775
No 416
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=21.12 E-value=3.3e+02 Score=22.03 Aligned_cols=69 Identities=7% Similarity=-0.042 Sum_probs=41.7
Q ss_pred HHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHH-CCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 43 LEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLA-MGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 43 le~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la-~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
.+.|.+|+++ |.+|+.+.-.+. .++.++++.. .|. +..+..| -.|...+...+.++.++. ++|+++.-.
T Consensus 22 ~~~a~~l~~~--G~~V~~~~r~~~-~~~~~~~l~~~~~~--~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lv~nA 92 (275)
T 2pd4_A 22 YGIAQSCFNQ--GATLAFTYLNES-LEKRVRPIAQELNS--PYVYELD-VSKEEHFKSLYNSVKKDLGSLDFIVHSV 92 (275)
T ss_dssp HHHHHHHHTT--TCEEEEEESSTT-THHHHHHHHHHTTC--CCEEECC-TTCHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH-HHHHHHHHHHhcCC--cEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4567777875 678877665543 3344444433 342 3333323 457777777777777766 579887654
No 417
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=20.98 E-value=3e+02 Score=21.53 Aligned_cols=71 Identities=18% Similarity=0.037 Sum_probs=42.2
Q ss_pred HHHHHHhhhhCCCc-------eEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEE
Q 025565 43 LEEALRIKESGLAS-------EVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLII 114 (251)
Q Consensus 43 le~A~~lae~~~g~-------~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl 114 (251)
.+.|.+|+++ |. +|+++.-.+...+...+++...|. ++..+..| -.|...+..++.++.++. ++|+++
T Consensus 16 ~~la~~l~~~--G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~li 91 (244)
T 2bd0_A 16 RAIALEFARA--ARHHPDFEPVLVLSSRTAADLEKISLECRAEGA-LTDTITAD-ISDMADVRRLTTHIVERYGHIDCLV 91 (244)
T ss_dssp HHHHHHHHHH--TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC-EEEEEECC-TTSHHHHHHHHHHHHHHTSCCSEEE
T ss_pred HHHHHHHHHh--cCcccccceEEEEEeCCHHHHHHHHHHHHccCC-eeeEEEec-CCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 4566777775 44 677665544333333333333453 45555533 457777777777777766 689888
Q ss_pred Ecc
Q 025565 115 LGK 117 (251)
Q Consensus 115 ~G~ 117 (251)
.-.
T Consensus 92 ~~A 94 (244)
T 2bd0_A 92 NNA 94 (244)
T ss_dssp ECC
T ss_pred EcC
Confidence 654
No 418
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=20.92 E-value=3.3e+02 Score=21.92 Aligned_cols=69 Identities=9% Similarity=-0.027 Sum_probs=41.1
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.-.++..++..+++ + +++..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 20 G~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D-~~~~~~v~~~~~~~~~~~g~iD~lv~~A 89 (260)
T 1nff_A 20 GASHVRAMVAE--GAKVVFGDILDEEGKAMAAEL---A-DAARYVHLD-VTQPAQWKAAVDTAVTAFGGLHVLVNNA 89 (260)
T ss_dssp HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---G-GGEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh---h-cCceEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 34567778875 678877665543322222221 2 124444433 457788888888877776 689888644
No 419
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=20.84 E-value=39 Score=29.74 Aligned_cols=52 Identities=21% Similarity=0.165 Sum_probs=29.4
Q ss_pred hHHHHHHHHHCCCCEEEEEeeCC-CCCHHH-HHHHHHHHHHH-hCCCEEEEccee
Q 025565 68 CVDTLRTGLAMGADRGVHVEAAG-QLYPLT-VAKILKSLVEV-EKPGLIILGKQA 119 (251)
Q Consensus 68 ~~~~l~~~la~GaD~vi~v~~~~-~~d~~a-~a~~La~~ik~-~~~dlIl~G~~s 119 (251)
+.+.+.++-+.|+|-+|.+.+-. ..|... .+.--...+++ -+.|+||.|++-
T Consensus 190 ~~~~v~~lr~~g~D~II~l~H~G~~~d~~~~~~en~~~~~~~v~gID~IlgGHsH 244 (339)
T 3jyf_A 190 ARKYIPEMRAKGADVVVVVAHSGLSADPYQAMAENSVYYLSQVPGVDAIMFGHAH 244 (339)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCCCCCSCCCTTCSCCHHHHTTSTTCCEEEECSSC
T ss_pred HHHHHHHHHhcCCCEEEEEeccCccccccccccchhHHHHhhCCCCCEEEeCCCc
Confidence 45566667778999999998643 112110 00000011223 379999999964
No 420
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=20.83 E-value=3.2e+02 Score=21.79 Aligned_cols=69 Identities=12% Similarity=0.135 Sum_probs=40.9
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+.+.-..+..++..++. +. ++..+..| -.|...+.+++.++.++. +.|+++.-.
T Consensus 22 G~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lv~nA 91 (248)
T 3op4_A 22 GKAIAELLAER--GAKVIGTATSESGAQAISDYL---GD-NGKGMALN-VTNPESIEAVLKAITDEFGGVDILVNNA 91 (248)
T ss_dssp HHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHH---GG-GEEEEECC-TTCHHHHHHHHHHHHHHHCCCSEEEECC
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh---cc-cceEEEEe-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 45677788875 678776654433222222222 22 23334333 457888888888887776 689888654
No 421
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=20.81 E-value=3.6e+02 Score=22.35 Aligned_cols=80 Identities=10% Similarity=-0.002 Sum_probs=43.6
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceee
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAI 120 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~ 120 (251)
+-.+.+.+|.+. |.++ ++++|++.-.+..++..+ +...+ .+. ...+-. -++++++ ..|++++..+
T Consensus 198 ~~~~l~~~L~~~--~~~v-vl~~g~~~e~~~~~~i~~-~~~~~-~l~--g~~sl~----el~ali~--~a~l~I~~DS-- 262 (326)
T 2gt1_A 198 HWRELIGLLADS--GIRI-KLPWGAPHEEERAKRLAE-GFAYV-EVL--PKMSLE----GVARVLA--GAKFVVSVDT-- 262 (326)
T ss_dssp HHHHHHHHTTTT--CCEE-EECCSSHHHHHHHHHHHT-TCTTE-EEC--CCCCHH----HHHHHHH--TCSEEEEESS--
T ss_pred HHHHHHHHHHHC--CCcE-EEecCCHHHHHHHHHHHh-hCCcc-ccc--CCCCHH----HHHHHHH--hCCEEEecCC--
Confidence 445677778753 4443 334575432233333333 33333 232 123333 3344555 5899997653
Q ss_pred cCCcCcHHHHHHHHcCCCccc
Q 025565 121 DDDCNQTGQMVAGLLSWPQGT 141 (251)
Q Consensus 121 d~~~~~v~~~lA~~Lg~p~vt 141 (251)
=+..||..+|.|+++
T Consensus 263 ------G~~HlAaa~g~P~v~ 277 (326)
T 2gt1_A 263 ------GLSHLTAALDRPNIT 277 (326)
T ss_dssp ------HHHHHHHHTTCCEEE
T ss_pred ------cHHHHHHHcCCCEEE
Confidence 356889999999873
No 422
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=20.71 E-value=1.4e+02 Score=21.43 Aligned_cols=63 Identities=21% Similarity=0.236 Sum_probs=36.6
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE 108 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~ 108 (251)
...++...+|++..++..+++++-.. ..+....++..|++..+. ...+.......|..+++..
T Consensus 63 ~~g~~~~~~l~~~~~~~~ii~ls~~~--~~~~~~~~~~~g~~~~l~----kp~~~~~L~~~l~~~~~~~ 125 (154)
T 2qsj_A 63 AEAIDGLVRLKRFDPSNAVALISGET--DHELIRAALEAGADGFIP----KSADPQVLIHAVSLILEGE 125 (154)
T ss_dssp --CHHHHHHHHHHCTTSEEEEC-------CHHHHHHHHTTCCBBCC----TTSCHHHHHHHHHHHHTTC
T ss_pred CchHHHHHHHHHhCCCCeEEEEeCCC--CHHHHHHHHHccCCEEEe----CCCCHHHHHHHHHHHHcCC
Confidence 34566667777654444555444332 245677888999886433 2457777777777776643
No 423
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=20.70 E-value=2.1e+02 Score=19.74 Aligned_cols=59 Identities=10% Similarity=0.179 Sum_probs=34.0
Q ss_pred HHHHHHHhhhh--CCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHH
Q 025565 42 ALEEALRIKES--GLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVE 106 (251)
Q Consensus 42 Ale~A~~lae~--~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik 106 (251)
.++...+|++. .....|+.++--.. .+...+++..|++..+. ..+++......|..+++
T Consensus 66 g~~~~~~lr~~~~~~~~pii~~s~~~~--~~~~~~~~~~g~~~~l~----KP~~~~~L~~~l~~~l~ 126 (129)
T 3h1g_A 66 GLDLVKKVRSDSRFKEIPIIMITAEGG--KAEVITALKAGVNNYIV----KPFTPQVLKEKLEVVLG 126 (129)
T ss_dssp HHHHHHHHHTSTTCTTCCEEEEESCCS--HHHHHHHHHHTCCEEEE----SCCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCCeEEEEeCCCC--hHHHHHHHHcCccEEEe----CCCCHHHHHHHHHHHhc
Confidence 34555566553 12345555554332 45667788889887544 24567766666666553
No 424
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=20.63 E-value=92 Score=26.99 Aligned_cols=52 Identities=19% Similarity=0.139 Sum_probs=28.0
Q ss_pred CCceEEEEeeCCchh-HHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEc
Q 025565 54 LASEVVAVSMGPAQC-VDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILG 116 (251)
Q Consensus 54 ~g~~V~al~~G~~~~-~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G 116 (251)
.|.+|..+ |.... .-+++-|.++|+.+++.++.. +.. .+.+++.+.|.++-.
T Consensus 190 ~g~~VlV~--GaG~vG~~a~qlak~~Ga~~Vi~~~~~----~~~-----~~~a~~lGa~~vi~~ 242 (371)
T 1f8f_A 190 PASSFVTW--GAGAVGLSALLAAKVCGASIIIAVDIV----ESR-----LELAKQLGATHVINS 242 (371)
T ss_dssp TTCEEEEE--SCSHHHHHHHHHHHHHTCSEEEEEESC----HHH-----HHHHHHHTCSEEEET
T ss_pred CCCEEEEE--CCCHHHHHHHHHHHHcCCCeEEEECCC----HHH-----HHHHHHcCCCEEecC
Confidence 45555444 54322 234555667899888887622 111 123455677777643
No 425
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=20.55 E-value=1.9e+02 Score=20.33 Aligned_cols=60 Identities=10% Similarity=0.183 Sum_probs=36.6
Q ss_pred HHHHHHHhhhh--CCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHH
Q 025565 42 ALEEALRIKES--GLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEV 107 (251)
Q Consensus 42 Ale~A~~lae~--~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~ 107 (251)
.++...+|++. .....++.++-... .+...+++..|++..+. ..+++......+..+++.
T Consensus 63 g~~~~~~lr~~~~~~~~pii~~t~~~~--~~~~~~~~~~ga~~~l~----KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 63 GYTLCKRVRQHPLTKTLPILMLTAQGD--ISAKIAGFEAGANDYLA----KPFEPQELVYRVKNILAR 124 (136)
T ss_dssp HHHHHHHHHHSGGGTTCCEEEEECTTC--HHHHHHHHHHTCSEEEE----TTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCcCCccEEEEecCCC--HHHHHHHHhcCcceEEe----CCCCHHHHHHHHHHHHhc
Confidence 35555556552 12345555554432 45667888999997443 256788878888777764
No 426
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=20.51 E-value=55 Score=25.85 Aligned_cols=41 Identities=12% Similarity=-0.165 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 96 TVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 96 a~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
..++.|++.++..++|+|+.-.. .+-..+..+|..||.|++
T Consensus 50 ~l~~~la~~~~~~~~d~Iv~v~~----rG~~~a~~la~~l~~p~~ 90 (190)
T 2dy0_A 50 LSIDLLVERYKNAGITKVVGTEA----RGFLFGAPVALGLGVGFV 90 (190)
T ss_dssp HHHHHHHHHHTTTTCCEEEEETT----HHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHhccCCCCEEEEECc----ccHHHHHHHHHHHCCCEE
Confidence 45666666666557888875542 334688999999999964
No 427
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=20.48 E-value=3.7e+02 Score=22.32 Aligned_cols=89 Identities=8% Similarity=0.006 Sum_probs=49.2
Q ss_pred HHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCC-CEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEccee
Q 025565 41 IALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGA-DRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQA 119 (251)
Q Consensus 41 ~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~Ga-D~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s 119 (251)
.++++..+|.+.++ .+..+.+|.....+.+++.. .|. +.+.... ..+.+. +.++.+ ..|++++....
T Consensus 215 ~li~a~~~l~~~~~--~~~l~i~G~g~~~~~l~~~~-~~~~~~v~~~g---~~~~~~----~~~~~~--~ad~~v~ps~~ 282 (394)
T 3okp_A 215 SLIKAMPQVIAARP--DAQLLIVGSGRYESTLRRLA-TDVSQNVKFLG---RLEYQD----MINTLA--AADIFAMPART 282 (394)
T ss_dssp HHHHHHHHHHHHST--TCEEEEECCCTTHHHHHHHT-GGGGGGEEEEE---SCCHHH----HHHHHH--HCSEEEECCCC
T ss_pred HHHHHHHHHHhhCC--CeEEEEEcCchHHHHHHHHH-hcccCeEEEcC---CCCHHH----HHHHHH--hCCEEEecCcc
Confidence 35667777776533 34555666554455666655 554 4555543 223333 333333 37888887765
Q ss_pred ec----CCcCcHHHHHHHHcCCCccc
Q 025565 120 ID----DDCNQTGQMVAGLLSWPQGT 141 (251)
Q Consensus 120 ~d----~~~~~v~~~lA~~Lg~p~vt 141 (251)
.. .++.-+...=|-..|.|+++
T Consensus 283 ~~~~~~~e~~~~~~~Ea~a~G~PvI~ 308 (394)
T 3okp_A 283 RGGGLDVEGLGIVYLEAQACGVPVIA 308 (394)
T ss_dssp BGGGTBCCSSCHHHHHHHHTTCCEEE
T ss_pred ccccccccccCcHHHHHHHcCCCEEE
Confidence 21 03333555567778888775
No 428
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=20.43 E-value=3.7e+02 Score=23.00 Aligned_cols=82 Identities=24% Similarity=0.191 Sum_probs=42.4
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEEcceeec
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAID 121 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~G~~s~d 121 (251)
+.+.+..+++ .|.+|+++..-+.. .. ..-+|+.+.++ ..|. ..|.+++++.++|+|+.+....
T Consensus 23 ~~~~~~a~~~--~G~~v~~~~~~~~~--~~-----~~~~d~~~~~~---~~d~----~~l~~~~~~~~~d~v~~~~e~~- 85 (391)
T 1kjq_A 23 GKEVAIECQR--LGVEVIAVDRYADA--PA-----MHVAHRSHVIN---MLDG----DALRRVVELEKPHYIVPEIEAI- 85 (391)
T ss_dssp HHHHHHHHHT--TTCEEEEEESSTTC--GG-----GGGSSEEEECC---TTCH----HHHHHHHHHHCCSEEEECSSCS-
T ss_pred HHHHHHHHHH--cCCEEEEEECCCCC--ch-----hhhccceEECC---CCCH----HHHHHHHHHcCCCEEEECCCcC-
Confidence 4445555554 35677766654432 00 11256665543 2343 3566677778999999876321
Q ss_pred CCcCcHHHHHHHHcCCCcccce
Q 025565 122 DDCNQTGQMVAGLLSWPQGTFA 143 (251)
Q Consensus 122 ~~~~~v~~~lA~~Lg~p~vt~v 143 (251)
. -+ .....+.+|++..++.
T Consensus 86 -~-~~-~~~~l~~~gi~~~~~~ 104 (391)
T 1kjq_A 86 -A-TD-MLIQLEEEGLNVVPCA 104 (391)
T ss_dssp -C-HH-HHHHHHHTTCEESSCH
T ss_pred -C-HH-HHHHHHhCCCCcCCCH
Confidence 1 11 2233456676544433
No 429
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=20.39 E-value=3.9e+02 Score=22.50 Aligned_cols=98 Identities=12% Similarity=0.041 Sum_probs=55.4
Q ss_pred CCHHhHHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEE--EeeCC------CCCHHHHHHHHHHHHH
Q 025565 35 MNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVH--VEAAG------QLYPLTVAKILKSLVE 106 (251)
Q Consensus 35 in~~d~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~--v~~~~------~~d~~a~a~~La~~ik 106 (251)
.+-......+.|..|++. |.+|+.++..... . .. .-.+.+.. +.... ..........+.+.++
T Consensus 26 ~GG~~~~~~~la~~L~~~--G~~V~v~~~~~~~--~-~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 96 (394)
T 2jjm_A 26 VGGSGVVGTELGKQLAER--GHEIHFITSGLPF--R-LN----KVYPNIYFHEVTVNQYSVFQYPPYDLALASKMAEVAQ 96 (394)
T ss_dssp -CHHHHHHHHHHHHHHHT--TCEEEEECSSCC-----------CCCTTEEEECCCCC----CCSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhC--CCEEEEEeCCCCC--c-cc----ccCCceEEEecccccccccccccccHHHHHHHHHHHH
Confidence 455667788889999885 7799998876532 1 11 11122222 11110 0112345567888888
Q ss_pred HhCCCEEEEcceeecCCcCcHHHHHHHHc---CCCcccceee
Q 025565 107 VEKPGLIILGKQAIDDDCNQTGQMVAGLL---SWPQGTFASK 145 (251)
Q Consensus 107 ~~~~dlIl~G~~s~d~~~~~v~~~lA~~L---g~p~vt~v~~ 145 (251)
+.+||+|.+-... ...+.+.++.++ +.|++..+-+
T Consensus 97 ~~~~Dvv~~~~~~----~~~~~~~~~~~~~~~~~p~v~~~h~ 134 (394)
T 2jjm_A 97 RENLDILHVHYAI----PHAICAYLAKQMIGERIKIVTTLHG 134 (394)
T ss_dssp HHTCSEEEECSST----THHHHHHHHHHHTTTCSEEEEECCH
T ss_pred HcCCCEEEEcchh----HHHHHHHHHHHhhcCCCCEEEEEec
Confidence 8999999985421 122455666555 4787655433
No 430
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=20.37 E-value=3.8e+02 Score=22.38 Aligned_cols=91 Identities=10% Similarity=0.064 Sum_probs=46.0
Q ss_pred HHHHHhhhhCCCceEEEEeeCCchhHHHHHH-HHHCCCCEEEEEeeC-CCCCH----HHHHHHHHHHHHHhCCCEEEEcc
Q 025565 44 EEALRIKESGLASEVVAVSMGPAQCVDTLRT-GLAMGADRGVHVEAA-GQLYP----LTVAKILKSLVEVEKPGLIILGK 117 (251)
Q Consensus 44 e~A~~lae~~~g~~V~al~~G~~~~~~~l~~-~la~GaD~vi~v~~~-~~~d~----~a~a~~La~~ik~~~~dlIl~G~ 117 (251)
..+..|++. +|.++..++.|... ....+ .-.+|..--+.+.-. ..... ......+.+.+++.+||+|++-.
T Consensus 23 ~l~~~L~~~-~g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~ 99 (376)
T 1v4v_A 23 PVYLALRGI-PGLKPLVLLTGQHR--EQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQAARALKEMGADYVLVHG 99 (376)
T ss_dssp HHHHHHHTS-TTEEEEEEECSSCH--HHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHHHHHHHHHTTCSEEEEES
T ss_pred HHHHHHHhC-CCCceEEEEcCCcH--HHHHHHHHHcCCCcccccccCCCCccHHHHHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 345556653 35577766666532 22222 223665321222211 11121 12234567778888999999832
Q ss_pred eeecCCcCcH-HHHHHHHcCCCccc
Q 025565 118 QAIDDDCNQT-GQMVAGLLSWPQGT 141 (251)
Q Consensus 118 ~s~d~~~~~v-~~~lA~~Lg~p~vt 141 (251)
. ....+ +...|..+++|++.
T Consensus 100 ~----~~~~~~~~~~a~~~~ip~v~ 120 (376)
T 1v4v_A 100 D----TLTTFAVAWAAFLEGIPVGH 120 (376)
T ss_dssp S----CHHHHHHHHHHHHTTCCEEE
T ss_pred C----hHHHHHHHHHHHHhCCCEEE
Confidence 1 11124 35567778999763
No 431
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=20.23 E-value=3.5e+02 Score=21.90 Aligned_cols=70 Identities=17% Similarity=0.153 Sum_probs=42.6
Q ss_pred HHHHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcce
Q 025565 40 EIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGKQ 118 (251)
Q Consensus 40 ~~Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~~ 118 (251)
--..+.|.+|++. |.+|+++.-..+...+.+ ...|+ ..+..| -.|...+...+.++.++. ++|+++.-..
T Consensus 38 gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~---~~~~~---~~~~~D-v~~~~~v~~~~~~~~~~~g~iD~lv~nAg 108 (260)
T 3gem_A 38 RVGLHCALRLLEH--GHRVIISYRTEHASVTEL---RQAGA---VALYGD-FSCETGIMAFIDLLKTQTSSLRAVVHNAS 108 (260)
T ss_dssp HHHHHHHHHHHHT--TCCEEEEESSCCHHHHHH---HHHTC---EEEECC-TTSHHHHHHHHHHHHHHCSCCSEEEECCC
T ss_pred HHHHHHHHHHHHC--CCEEEEEeCChHHHHHHH---HhcCC---eEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 3445677778875 667777766554332333 23342 233322 457777888888777776 6898886553
No 432
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=20.23 E-value=2.4e+02 Score=20.09 Aligned_cols=60 Identities=12% Similarity=0.078 Sum_probs=38.1
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCC-CCEEEEEeeCCCCCHHHHHHHHHHHHHH
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMG-ADRGVHVEAAGQLYPLTVAKILKSLVEV 107 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~G-aD~vi~v~~~~~~d~~a~a~~La~~ik~ 107 (251)
.++...+|++.+....|++++-.. ..+...+++..| ++..+. ..++...+...|..+++.
T Consensus 73 g~~~~~~l~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~~l~----KP~~~~~l~~~i~~~l~~ 133 (153)
T 3hv2_A 73 GPTLLARIHQQYPSTTRILLTGDP--DLKLIAKAINEGEIYRYLS----KPWDDQELLLALRQALEH 133 (153)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCCC--CHHHHHHHHHTTCCSEEEC----SSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHCCCCeEEEEECCC--CHHHHHHHHhCCCcceEEe----CCCCHHHHHHHHHHHHHH
Confidence 355556666654455665554433 356778899999 886543 246777777777777653
No 433
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=20.22 E-value=3.7e+02 Score=22.35 Aligned_cols=61 Identities=10% Similarity=0.121 Sum_probs=35.4
Q ss_pred HCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-----CCCEEEEcceeecCCcCcHHHHHHHHcCCC
Q 025565 77 AMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-----KPGLIILGKQAIDDDCNQTGQMVAGLLSWP 138 (251)
Q Consensus 77 a~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-----~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p 138 (251)
..|.++-.....+ .....-...+..+++++- +.|.|++|..+.+.....++.+++.+||++
T Consensus 36 ~~Gi~~r~~~~~~-~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~ 101 (317)
T 1hnj_A 36 RTGIRERHIAAPN-ETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK 101 (317)
T ss_dssp HHCCCEEEECCTT-CCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCC
T ss_pred HhCceEEEecCCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC
Confidence 4577766665322 111222233344444432 356888887766655556888888888886
No 434
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=20.22 E-value=1.3e+02 Score=25.92 Aligned_cols=39 Identities=13% Similarity=0.007 Sum_probs=20.3
Q ss_pred HHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHhCCCEEEE
Q 025565 71 TLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIIL 115 (251)
Q Consensus 71 ~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~~~dlIl~ 115 (251)
+++-|.++|+..+..++.+. +.. ...+.+++.+.|.++-
T Consensus 184 aiqlak~~Ga~vi~~~~~~~--~~~----~~~~~~~~lGa~~vi~ 222 (357)
T 1zsy_A 184 VIQIAAALGLRTINVVRDRP--DIQ----KLSDRLKSLGAEHVIT 222 (357)
T ss_dssp HHHHHHHHTCEEEEEECCCS--CHH----HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCEEEEEecCcc--chH----HHHHHHHhcCCcEEEe
Confidence 45556678997666654221 111 1123345567776664
No 435
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=20.19 E-value=78 Score=27.17 Aligned_cols=40 Identities=15% Similarity=0.131 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhCCCEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 97 VAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 97 ~a~~La~~ik~~~~dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
++..|++.++..++|+|++-. ..|-..+..+|..||.|++
T Consensus 118 la~~la~~~~~~~~d~Iv~V~----~rG~~~A~~lA~~L~vp~v 157 (291)
T 1o57_A 118 VGKLFASVFAEREIDVVMTVA----TKGIPLAYAAASYLNVPVV 157 (291)
T ss_dssp HHHHHHHHTTTSCCSEEEEET----TTTHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHhhccCCCEEEEEC----CCCHHHHHHHHHHhCCCEE
Confidence 334444444444689888654 2334688899999999974
No 436
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=20.03 E-value=3.5e+02 Score=21.80 Aligned_cols=72 Identities=7% Similarity=-0.026 Sum_probs=43.4
Q ss_pred HHHHHHHhhhhCCCceEEEEeeCCchhHHHHHHHHHCCCCEEEEEeeCCCCCHHHHHHHHHHHHHHh-CCCEEEEcc
Q 025565 42 ALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVE-KPGLIILGK 117 (251)
Q Consensus 42 Ale~A~~lae~~~g~~V~al~~G~~~~~~~l~~~la~GaD~vi~v~~~~~~d~~a~a~~La~~ik~~-~~dlIl~G~ 117 (251)
..+.|.+|+++ |.+|+++.-.+...++..+.+-.+|.. +..+..| -.|...+..++.++.++. .+|+|+.-.
T Consensus 47 G~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-l~~~~~~~~~~~~~~~~~g~id~li~~A 119 (279)
T 3ctm_A 47 GWAVAEAYAQA--GADVAIWYNSHPADEKAEHLQKTYGVH-SKAYKCN-ISDPKSVEETISQQEKDFGTIDVFVANA 119 (279)
T ss_dssp HHHHHHHHHHH--TCEEEEEESSSCCHHHHHHHHHHHCSC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCSEEEECG
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCc-ceEEEee-cCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 34567777775 567777766554433333333344543 4444433 457777777777777666 589888644
No 437
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=20.00 E-value=32 Score=25.98 Aligned_cols=28 Identities=14% Similarity=0.093 Sum_probs=20.1
Q ss_pred CEEEEcceeecCCcCcHHHHHHHHcCCCcc
Q 025565 111 GLIILGKQAIDDDCNQTGQMVAGLLSWPQG 140 (251)
Q Consensus 111 dlIl~G~~s~d~~~~~v~~~lA~~Lg~p~v 140 (251)
.++|+|...+|+ ..++-+||.+||+|++
T Consensus 9 ~i~l~G~~GsGK--STva~~La~~lg~~~i 36 (168)
T 1zuh_A 9 HLVLIGFMGSGK--SSLAQELGLALKLEVL 36 (168)
T ss_dssp EEEEESCTTSSH--HHHHHHHHHHHTCCEE
T ss_pred eEEEECCCCCCH--HHHHHHHHHHhCCCEE
Confidence 466777765554 3588888999998876
Done!