BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>025568
MYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIG
LRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHR
NSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCA
KLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEY
ADAVYKLKEN

High Scoring Gene Products

Symbol, full name Information P value
AT3G07310 protein from Arabidopsis thaliana 1.2e-69
AT5G48590 protein from Arabidopsis thaliana 9.9e-64
AT3G17800 protein from Arabidopsis thaliana 4.2e-40
AT1G48450 protein from Arabidopsis thaliana 5.3e-40
AT1G32160 protein from Arabidopsis thaliana 8.5e-33

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025568
        (250 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2079626 - symbol:AT3G07310 "AT3G07310" species...   437  1.2e-69   2
TAIR|locus:2152516 - symbol:AT5G48590 "AT5G48590" species...   410  9.9e-64   2
TAIR|locus:2088490 - symbol:AT3G17800 "AT3G17800" species...   427  4.2e-40   1
TAIR|locus:2198055 - symbol:AT1G48450 "AT1G48450" species...   426  5.3e-40   1
TAIR|locus:2031760 - symbol:AT1G32160 "AT1G32160" species...   358  8.5e-33   1


>TAIR|locus:2079626 [details] [associations]
            symbol:AT3G07310 "AT3G07310" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0009740 "gibberellic acid mediated signaling
            pathway" evidence=RCA] [GO:0010162 "seed dormancy process"
            evidence=RCA] EMBL:CP002686 EMBL:AC009853 EMBL:AC012395
            InterPro:IPR008479 Pfam:PF05542 HOGENOM:HOG000240370
            ProtClustDB:CLSN2686605 EMBL:AY042881 EMBL:AY087626 EMBL:AY128715
            IPI:IPI00542218 RefSeq:NP_566302.1 UniGene:At.21337 IntAct:Q9S7A6
            STRING:Q9S7A6 EnsemblPlants:AT3G07310.1 GeneID:819919
            KEGG:ath:AT3G07310 TAIR:At3g07310 InParanoid:Q9S7A6 OMA:RCIYNGR
            PhylomeDB:Q9S7A6 ArrayExpress:Q9S7A6 Genevestigator:Q9S7A6
            Uniprot:Q9S7A6
        Length = 368

 Score = 437 (158.9 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
 Identities = 83/112 (74%), Positives = 95/112 (84%)

Query:     1 MYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIG 60
             MYMLI YK+SEIRV LVPKLSRCIYNGRLEIWPSKDWELESI+  + LE+I+EH+S VIG
Sbjct:   137 MYMLIFYKYSEIRVPLVPKLSRCIYNGRLEIWPSKDWELESIYSCDTLEIIKEHVSAVIG 196

Query:    61 LRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAH 112
             LR N  VTD+WATT+IQ+L L +VY ASILYGYFLKSASLR+ LE  L+  H
Sbjct:   197 LRVNSCVTDNWATTQIQKLHLRKVYAASILYGYFLKSASLRHQLECSLSDIH 248

 Score = 287 (106.1 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
 Identities = 67/134 (50%), Positives = 82/134 (61%)

Query:   117 LTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETL 176
             L H+      +    G  ++ + GC       S   GT     KQ+ L+ Y+  FDPETL
Sbjct:   236 LRHQLECSLSDIHGSGYLKSPIFGC-------SFTTGTAQISNKQQ-LRHYISDFDPETL 287

Query:   177 QRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWD 236
             QRCAK R+ EA NL+EK S ALFG  ++     DE I+TSFSSLKRLVLEA+AFG+FLWD
Sbjct:   288 QRCAKPRTEEARNLIEKQSLALFGTEES-----DETIVTSFSSLKRLVLEAVAFGTFLWD 342

Query:   237 AEEYADAVYKLKEN 250
              E Y D  YKLKEN
Sbjct:   343 TELYVDGAYKLKEN 356


>TAIR|locus:2152516 [details] [associations]
            symbol:AT5G48590 "AT5G48590" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0000023 "maltose metabolic process" evidence=RCA]
            [GO:0009627 "systemic acquired resistance" evidence=RCA]
            [GO:0019252 "starch biosynthetic process" evidence=RCA] [GO:0031347
            "regulation of defense response" evidence=RCA] [GO:0043085
            "positive regulation of catalytic activity" evidence=RCA]
            EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB015468
            UniGene:At.21136 UniGene:At.29840 InterPro:IPR008479 Pfam:PF05542
            EMBL:BT003872 EMBL:BT005499 IPI:IPI00527403 RefSeq:NP_199670.1
            EnsemblPlants:AT5G48590.1 GeneID:834916 KEGG:ath:AT5G48590
            TAIR:At5g48590 eggNOG:NOG321639 HOGENOM:HOG000240370
            InParanoid:Q9FJL1 OMA:IAVEDIM PhylomeDB:Q9FJL1
            ProtClustDB:CLSN2686605 ArrayExpress:Q9FJL1 Genevestigator:Q9FJL1
            Uniprot:Q9FJL1
        Length = 344

 Score = 410 (149.4 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
 Identities = 82/112 (73%), Positives = 91/112 (81%)

Query:     1 MYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIG 60
             MYMLILYKFSEIRV LVPKL  CIYNGRLEI PSKDWELESIH F+VLE+I+EH + VI 
Sbjct:   133 MYMLILYKFSEIRVPLVPKLPSCIYNGRLEISPSKDWELESIHSFDVLELIKEHSNAVIS 192

Query:    61 LRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAH 112
             LR N S+TD  ATTEI + RL +VY AS+LYGYFLKSASLR+ LE C  S H
Sbjct:   193 LRVNSSLTDDCATTEIDKNRLSKVYTASVLYGYFLKSASLRHQLE-CSLSQH 243

 Score = 258 (95.9 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
 Identities = 52/89 (58%), Positives = 67/89 (75%)

Query:   162 ENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLK 221
             + L+ Y+  FDP+ L+RCAK RS EA +L+EK S ALFG  ++    + E I+TSFSSLK
Sbjct:   249 KQLRHYISEFDPKILRRCAKPRSHEAKSLIEKQSLALFGPEES----SKESIVTSFSSLK 304

Query:   222 RLVLEAIAFGSFLWDAEEYADAVYKLKEN 250
             RL+LEA+AFG+FLWD EEY D  +KLKEN
Sbjct:   305 RLLLEAVAFGTFLWDTEEYVDGAFKLKEN 333

 Score = 52 (23.4 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query:   114 DLHLTHRNSLQFPEAWSYGLKQNQVVGCV 142
             D  L+H  SL FP +    +KQN+   CV
Sbjct:     2 DTSLSHHGSLPFPPSRRNFVKQNRGGDCV 30


>TAIR|locus:2088490 [details] [associations]
            symbol:AT3G17800 "AT3G17800" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0010224 "response to UV-B"
            evidence=IGI;IEP] EMBL:CP002686 GO:GO:0010224 UniGene:At.22111
            UniGene:At.71032 UniGene:At.74878 UniGene:At.74926
            InterPro:IPR008479 Pfam:PF05542 IPI:IPI00846743
            RefSeq:NP_001078173.1 PRIDE:F4J6F0 EnsemblPlants:AT3G17800.2
            GeneID:821048 KEGG:ath:AT3G17800 OMA:ESHVDAR Uniprot:F4J6F0
        Length = 427

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 102/255 (40%), Positives = 144/255 (56%)

Query:     1 MYMLILYKFSEIRVQLVPKLSRCIY-NGRLEIWPSKDWELESIHEFEVLEMIREHISTVI 59
             +Y L++ KF E  V LVP +S     +GR++ WP+K  +LE +H  E+ EMI  H++ ++
Sbjct:   176 LYALVVQKFMEANVSLVPSVSPSSDPSGRVDTWPTKVEKLERLHSPEMYEMIHNHLALIL 235

Query:    60 GLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLA--SAHQDLHL 117
             G R      D  +  +I +LR+G+VY AS++YGYFLK    R+ LE+ +       D   
Sbjct:   236 GSRMG----DLNSVAQISKLRVGQVYAASVMYGYFLKRVDQRFQLEKTMKILPGGSDESK 291

Query:   118 THRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQ 177
             T     +    +   +  +  VG      S    +G  G E+K   L+ YVM FD ETLQ
Sbjct:   292 TSVEQAEGTATYQAAVSSHPEVGAFAGGVS---AKGF-GSEIKPSRLRSYVMSFDAETLQ 347

Query:   178 RCAKLRSREAVNLVEKHSCALFGDGQT-----GLLDT--DEVILTSFSSLKRLVLEAIAF 230
             R A +RSREAV ++EKH+ ALFG  +      G +D+  DE I  SF  +KRLVLEA+ F
Sbjct:   348 RYATIRSREAVGIIEKHTEALFGKPEIVITPEGTVDSSKDEQIKISFGGMKRLVLEAVTF 407

Query:   231 GSFLWDAEEYADAVY 245
             GSFLWD E + DA Y
Sbjct:   408 GSFLWDVESHVDARY 422


>TAIR|locus:2198055 [details] [associations]
            symbol:AT1G48450 "AT1G48450" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC020889 InterPro:IPR008479
            Pfam:PF05542 UniGene:At.15305 UniGene:At.27162 HOGENOM:HOG000240370
            EMBL:AY065051 EMBL:BT000942 IPI:IPI00529882 RefSeq:NP_175278.1
            IntAct:Q9LP80 EnsemblPlants:AT1G48450.1 GeneID:841266
            KEGG:ath:AT1G48450 TAIR:At1g48450 InParanoid:Q9LP80 OMA:MSFDGET
            PhylomeDB:Q9LP80 ProtClustDB:CLSN2688500 ArrayExpress:Q9LP80
            Genevestigator:Q9LP80 Uniprot:Q9LP80
        Length = 423

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 107/265 (40%), Positives = 148/265 (55%)

Query:     1 MYMLILYKFSEIRVQLVPKL--SRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTV 58
             +Y L++ KF +  V LVP +  S    +GR++ WP+ D ELE +H  EV EMI+ H+S +
Sbjct:   161 LYALVVQKFMDANVTLVPSITSSSADPSGRVDTWPTLDGELERLHSPEVYEMIQNHLSII 220

Query:    59 IGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECL---------- 108
             +  R +    D  A  +I +L +G+VY AS++YGYFLK    R+ LE+ +          
Sbjct:   221 LKNRTD----DLTAVAQISKLGVGQVYAASVMYGYFLKRIDQRFQLEKTMRILPGGSDEG 276

Query:   109 -ASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCY 167
               S  Q      RN  +  E     +  NQ VG       I+   G +  ++KQ  LK Y
Sbjct:   277 ETSIEQAGRDVERNFYEEAEETYQAVSSNQDVGSF--VGGINASGGFSS-DMKQSRLKTY 333

Query:   168 VMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQT-----GLLDT--DEVILTSFSSL 220
             VM FD ETLQR A +RSRE+V ++EKH+ ALFG  +      G +D+  DE I  SF  L
Sbjct:   334 VMSFDGETLQRYATIRSRESVGIIEKHTEALFGRPEIVITPQGTIDSSKDEHIKISFKGL 393

Query:   221 KRLVLEAIAFGSFLWDAEEYADAVY 245
             KRLVLEA+ FGSFLWD E + D+ Y
Sbjct:   394 KRLVLEAVTFGSFLWDVESHVDSRY 418


>TAIR|locus:2031760 [details] [associations]
            symbol:AT1G32160 "AT1G32160" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009570
            "chloroplast stroma" evidence=IDA] [GO:0009965 "leaf morphogenesis"
            evidence=RCA] [GO:0010155 "regulation of proton transport"
            evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
            [GO:0046777 "protein autophosphorylation" evidence=RCA]
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009570 EMBL:AC084165
            InterPro:IPR008479 Pfam:PF05542 HOGENOM:HOG000240370 EMBL:AY037196
            EMBL:AY087896 EMBL:BT002680 IPI:IPI00538936 PIR:A86446
            RefSeq:NP_564389.1 UniGene:At.24385 STRING:Q9FVR1 PaxDb:Q9FVR1
            PRIDE:Q9FVR1 EnsemblPlants:AT1G32160.1 GeneID:840108
            KEGG:ath:AT1G32160 TAIR:At1g32160 eggNOG:NOG282956
            InParanoid:Q9FVR1 OMA:DAFEMIQ PhylomeDB:Q9FVR1
            ProtClustDB:CLSN2688184 Genevestigator:Q9FVR1 Uniprot:Q9FVR1
        Length = 406

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 90/257 (35%), Positives = 144/257 (56%)

Query:     1 MYMLILYKFSEIRVQLVPKLSRCIYN-GRLEIWPSKDWELESIHEFEVLEMIREHISTVI 59
             +Y L++++F E  + ++P++       GR+++WP+++ +LE IH  +  EMI+ H+S+V+
Sbjct:   151 IYCLVVHRFVEKGISMIPRIKPTSDPAGRIDLWPNQEEKLEVIHSADAFEMIQSHLSSVL 210

Query:    60 GLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTH 119
             G     +V    +  +I +++LG++Y AS +YGYFL+    RY LE  + +  +    T 
Sbjct:   211 G--DGPAVGPLSSIVQIGKIKLGKLYAASAMYGYFLRRVDQRYQLERTMNTLPKRPEKT- 267

Query:   120 RNSLQFPEAWSYGLKQNQVVGCVN----NTQSISLGRGTNGHELKQENLKCYVMGFDPET 175
             R   + P    Y L     +  +     +    ++ R  N  E     L+ YV   D +T
Sbjct:   268 RERFEEPSP-PYPLWDPDSLIRIQPEEYDPDEYAIQR--NEDESSSYGLRSYVTYLDSDT 324

Query:   176 LQRCAKLRSREAVNLVEKHSCALFGDG-----QTGLLDT--DEVILTSFSSLKRLVLEAI 228
             LQR A +RS+EA+ L+EK + ALFG       + G LDT  DEV+  S S L  LVLEA+
Sbjct:   325 LQRYATIRSKEAMTLIEKQTQALFGRPDIRILEDGKLDTSNDEVLSLSVSGLAMLVLEAV 384

Query:   229 AFGSFLWDAEEYADAVY 245
             AFGSFLWD+E Y ++ Y
Sbjct:   385 AFGSFLWDSESYVESKY 401


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      250       250   0.00080  114 3  11 22  0.41    33
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  212 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.22u 0.11s 20.33t   Elapsed:  00:00:01
  Total cpu time:  20.22u 0.11s 20.33t   Elapsed:  00:00:01
  Start:  Fri May 10 15:32:52 2013   End:  Fri May 10 15:32:53 2013

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