Query 025568
Match_columns 250
No_of_seqs 96 out of 115
Neff 4.0
Searched_HMMs 13730
Date Mon Mar 25 12:57:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025568.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025568hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2nn6a2 d.101.1.1 (A:185-302) 20.5 47 0.0034 23.7 3.9 32 170-201 57-88 (118)
2 d2nn6c2 d.101.1.1 (C:188-276) 18.8 56 0.004 21.8 3.8 29 170-198 55-83 (89)
3 d2fnaa1 a.4.5.11 (A:284-356) H 17.2 20 0.0015 24.8 1.0 20 222-242 9-29 (73)
4 d2nn6e2 d.101.1.1 (E:192-285) 16.1 71 0.0052 21.5 3.8 29 170-198 55-83 (94)
5 d2je6a2 d.101.1.1 (A:192-275) 14.0 66 0.0048 21.0 3.1 29 170-198 54-82 (84)
6 d1cmza_ a.91.1.1 (A:) Galpha i 13.1 22 0.0016 25.1 0.3 48 4-59 63-110 (128)
7 d1h9aa2 d.81.1.5 (A:182-412,A: 12.1 20 0.0015 30.1 -0.3 23 46-68 51-73 (290)
8 d1f80d_ a.28.1.1 (D:) Acyl car 11.7 34 0.0025 22.2 0.9 52 44-104 1-53 (74)
9 d1r59o2 c.55.1.4 (O:257-491) G 11.6 46 0.0033 26.2 1.9 18 215-232 116-133 (235)
10 d1qkia2 d.81.1.5 (A:200-434,A: 10.7 24 0.0017 29.8 -0.3 24 45-68 55-78 (297)
No 1
>d2nn6a2 d.101.1.1 (A:185-302) Exosome complex exonuclease RRP45 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.52 E-value=47 Score=23.68 Aligned_cols=32 Identities=22% Similarity=0.262 Sum_probs=28.6
Q ss_pred cCCHHHHHHHhhhhhHHHHHHHHHhhhhhcCC
Q 025568 170 GFDPETLQRCAKLRSREAVNLVEKHSCALFGD 201 (250)
Q Consensus 170 ~fD~eTLqr~A~irSkEav~liEkht~ALFG~ 201 (250)
.|+++++.+|..+..+.+-.|.+..-.||=.+
T Consensus 57 ~l~~~~l~~~~~~A~~~~~el~~~i~~aLk~~ 88 (118)
T d2nn6a2 57 MLLKDQVLRCSKIAGVKVAEITELILKALEND 88 (118)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999999999999999999998543
No 2
>d2nn6c2 d.101.1.1 (C:188-276) Exosome complex exonuclease RRP43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.79 E-value=56 Score=21.80 Aligned_cols=29 Identities=14% Similarity=0.203 Sum_probs=26.3
Q ss_pred cCCHHHHHHHhhhhhHHHHHHHHHhhhhh
Q 025568 170 GFDPETLQRCAKLRSREAVNLVEKHSCAL 198 (250)
Q Consensus 170 ~fD~eTLqr~A~irSkEav~liEkht~AL 198 (250)
.|++++|+.|..+..+.+-.|.+..-+||
T Consensus 55 ~l~~~~l~~~~~~A~~~~~~l~~~l~~al 83 (89)
T d2nn6c2 55 GLTGAKLQDCMSRAVTRHKEVKKLMDEVI 83 (89)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999888877
No 3
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=17.18 E-value=20 Score=24.77 Aligned_cols=20 Identities=10% Similarity=0.290 Sum_probs=14.5
Q ss_pred HHHHHHHhhhhhhh-hhhhccc
Q 025568 222 RLVLEAIAFGSFLW-DAEEYAD 242 (250)
Q Consensus 222 rLVLEAvaFGSFLw-DvEsyVD 242 (250)
+.||+|||+|+= | ++=.||+
T Consensus 9 ~~ILkaia~G~r-Ws~IK~yle 29 (73)
T d2fnaa1 9 LNIMRTLSKCGK-WSDVKRALE 29 (73)
T ss_dssp HHHHHHHTTCBC-HHHHHHHHH
T ss_pred HHHHHHHHccCc-HHHHHHHHH
Confidence 579999999974 6 4555554
No 4
>d2nn6e2 d.101.1.1 (E:192-285) Exosome complex exonuclease RRP42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.07 E-value=71 Score=21.54 Aligned_cols=29 Identities=17% Similarity=0.227 Sum_probs=27.1
Q ss_pred cCCHHHHHHHhhhhhHHHHHHHHHhhhhh
Q 025568 170 GFDPETLQRCAKLRSREAVNLVEKHSCAL 198 (250)
Q Consensus 170 ~fD~eTLqr~A~irSkEav~liEkht~AL 198 (250)
.|+++++..|..+..+-+..|.+..-+||
T Consensus 55 ~l~~~~i~~~i~~A~~~~~el~~~l~~~L 83 (94)
T d2nn6e2 55 SLDPESIFEMMETGKRVGKVLHASLQSVV 83 (94)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999988887
No 5
>d2je6a2 d.101.1.1 (A:192-275) Exosome complex exonuclease 2, ECX2 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=14.00 E-value=66 Score=20.99 Aligned_cols=29 Identities=17% Similarity=0.252 Sum_probs=26.2
Q ss_pred cCCHHHHHHHhhhhhHHHHHHHHHhhhhh
Q 025568 170 GFDPETLQRCAKLRSREAVNLVEKHSCAL 198 (250)
Q Consensus 170 ~fD~eTLqr~A~irSkEav~liEkht~AL 198 (250)
.|+++.+.+|-.+..+.+..|++..-+||
T Consensus 54 ~~~~~~i~~~i~~A~~~~~~l~~~l~~~l 82 (84)
T d2je6a2 54 SMSLQDIDQAENTARSTAVKLLEELKKHL 82 (84)
T ss_dssp CEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999887776
No 6
>d1cmza_ a.91.1.1 (A:) Galpha interacting protein, GaIP {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.13 E-value=22 Score=25.11 Aligned_cols=48 Identities=15% Similarity=0.164 Sum_probs=27.5
Q ss_pred HHHHHHhhcCcccccCCCccccCCccccCCCcchhhcccCcHHHHHHHHHHHHHhh
Q 025568 4 LILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVI 59 (250)
Q Consensus 4 lIv~KF~~~~V~mvP~ls~~~~~grv~~wP~~~~~Le~~hS~Ev~emI~~hl~~vL 59 (250)
-|.+||...+-+.-+.+++.+.+. ....+..++ +++++.++++|..+|
T Consensus 63 ~Iy~~yi~~~s~~~~~i~~~~r~~-------i~~~~~~~~-~~~F~~aq~~V~~~l 110 (128)
T d1cmza_ 63 LIYEDYVSILSPKEVSLDSRVREG-------INKKMQEPS-AHTFDDAQLQIYTLM 110 (128)
T ss_dssp HHHHHTTTCSSSCCCSCCSHHHHH-------HHHHSSSCC-TTSTHHHHHHHHHHH
T ss_pred HHHHHHhccCCCccCCcCHHHHHH-------HHHHhcCCC-HHHHHHHHHHHHHHH
Confidence 478888888877766666532110 012233333 566666777766665
No 7
>d1h9aa2 d.81.1.5 (A:182-412,A:427-485) Glucose 6-phosphate dehydrogenase {Leuconostoc mesenteroides [TaxId: 1245]}
Probab=12.09 E-value=20 Score=30.11 Aligned_cols=23 Identities=26% Similarity=0.414 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhhccccCCCCC
Q 025568 46 EVLEMIREHISTVIGLRANCSVT 68 (250)
Q Consensus 46 Ev~emI~~hl~~vLG~~~~~~~~ 68 (250)
-+.|||+|||..||...+-+...
T Consensus 51 aiRDmvQNHLlQll~lvaMe~P~ 73 (290)
T d1h9aa2 51 ALLDMIQNHTMQIVGWLAMEKPE 73 (290)
T ss_dssp HHHHTTTTHHHHHHHHHHCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHhCccc
Confidence 45899999999999988766443
No 8
>d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]}
Probab=11.69 E-value=34 Score=22.17 Aligned_cols=52 Identities=12% Similarity=0.082 Sum_probs=32.2
Q ss_pred cHHHHHHHHHHHHHhhccccCCCCCCCcceEEechhhhh-hHHHHHhhhhHhhhhhhhHhHH
Q 025568 44 EFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLG-RVYVASILYGYFLKSASLRYYL 104 (250)
Q Consensus 44 S~Ev~emI~~hl~~vLG~~~~~~~~~~~~~~~isr~~Lg-~lyAAsmM~GYFLr~~eqR~~L 104 (250)
|.|+++-|++.+...+|.-|.. .++ .. ++. .+-.=|+|.-=++.+++++|.+
T Consensus 1 s~dv~~~v~~iia~~l~~~~~~-i~~-----~~---~~~~DlG~DSl~~vel~~~le~~f~i 53 (74)
T d1f80d_ 1 SADTLERVTKIIVDRLGVDEAD-VKL-----EA---SFKEDLGADXLDVVELVMELEDEFDM 53 (74)
T ss_dssp CCHHHHHHHHHHHHHSSCCSSC-CCT-----TC---BHHHHSCCCHHHHHHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHHHHHHCcCHHH-cCC-----Cc---cHHHhcCccHhHHHHHHHHHHHHhCC
Confidence 5789999999999999976643 221 11 222 2334566665555555555543
No 9
>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]}
Probab=11.61 E-value=46 Score=26.20 Aligned_cols=18 Identities=33% Similarity=0.466 Sum_probs=14.6
Q ss_pred echhhhHHHHHHHHhhhh
Q 025568 215 TSFSSLKRLVLEAIAFGS 232 (250)
Q Consensus 215 isfs~LkrLVLEAvaFGS 232 (250)
.+-..|-|.|||+|||+.
T Consensus 116 ~~~~~l~rAvlEgiaf~~ 133 (235)
T d1r59o2 116 TTKEDFVRATLQAVAYQS 133 (235)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 345568899999999984
No 10
>d1qkia2 d.81.1.5 (A:200-434,A:450-511) Glucose 6-phosphate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.67 E-value=24 Score=29.83 Aligned_cols=24 Identities=13% Similarity=0.133 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHhhccccCCCCC
Q 025568 45 FEVLEMIREHISTVIGLRANCSVT 68 (250)
Q Consensus 45 ~Ev~emI~~hl~~vLG~~~~~~~~ 68 (250)
--+.|||+|||..||...+-+...
T Consensus 55 GalRDmvQNHllQll~lvaME~P~ 78 (297)
T d1qkia2 55 GIIRDVMQNHLLQMLCLVAMEKPA 78 (297)
T ss_dssp HHHHHTTTTHHHHHHHHHHCCCCS
T ss_pred chHHHHHHHHHHHHHHHHHhCCcc
Confidence 456899999999999977665443
Done!