Query 025569
Match_columns 250
No_of_seqs 16 out of 18
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 12:59:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025569.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025569hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1yqfa1 d.25.1.1 (A:14-195) Hy 17.7 73 0.0053 23.4 4.5 38 170-217 4-42 (182)
2 d1ocxa_ b.81.1.3 (A:) Maltose 16.1 40 0.0029 24.7 2.6 33 145-177 21-53 (182)
3 d2cuia1 b.1.2.1 (A:6-106) Tena 15.1 29 0.0021 21.3 1.3 11 186-196 1-11 (101)
4 d1x5za1 b.1.2.1 (A:8-109) Rece 13.6 26 0.0019 21.8 0.8 13 183-195 5-17 (102)
5 d1pixa2 c.14.1.4 (A:1-287) Glu 11.6 35 0.0025 27.3 1.1 14 138-151 55-68 (287)
6 d1on3a1 c.14.1.4 (A:8-260) Met 10.6 40 0.0029 26.4 1.1 35 193-227 64-100 (253)
7 d2a7sa1 c.14.1.4 (A:20-277) Pr 10.4 41 0.003 26.5 1.1 13 139-151 34-46 (258)
8 d1vrga1 c.14.1.4 (A:1-251) Pro 10.3 42 0.003 26.2 1.1 13 139-151 31-43 (251)
9 d1dfna_ g.9.1.1 (A:) Defensin 10.1 36 0.0026 20.3 0.5 11 45-55 11-21 (30)
10 d1w94a1 c.51.1.2 (A:1-154) Pro 8.8 35 0.0025 25.8 0.1 28 198-226 51-78 (154)
No 1
>d1yqfa1 d.25.1.1 (A:14-195) Hypothetical protein Lmaj011689 {Leishmania major [TaxId: 5664]}
Probab=17.70 E-value=73 Score=23.41 Aligned_cols=38 Identities=29% Similarity=0.338 Sum_probs=22.3
Q ss_pred HHHHHHHhhhccc-ccCCCCCCCCCCcccccCCCCCCCCceeeecCCcc
Q 025569 170 SKVLDALKESDRG-KRRSRLPEAPTNLFDDSKRGLPKPGLTFQFPGGMD 217 (250)
Q Consensus 170 s~vLdAlresDk~-k~~sglPeaP~NlfdDskRg~pKeg~tF~fp~G~d 217 (250)
..|+++|++-=+- +.++-.|+.|. |..||+.+--.|..
T Consensus 4 ~~L~~~l~~Ei~~E~~~~~~~~~p~----------~~~gf~i~d~~g~~ 42 (182)
T d1yqfa1 4 AALADATRRELEEEMGRSDKPEQPT----------PPAGWQVVRKPGTC 42 (182)
T ss_dssp HHHHHHHHHHHHHHHTCSSCCCCCC----------CCTTCEEEECTTSS
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCC----------CCCCCEEEEcCCce
Confidence 3566777655444 44555555552 55699998444443
No 2
>d1ocxa_ b.81.1.3 (A:) Maltose O-acetyltransferase {Escherichia coli [TaxId: 562]}
Probab=16.06 E-value=40 Score=24.73 Aligned_cols=33 Identities=30% Similarity=0.581 Sum_probs=25.9
Q ss_pred HHHHHHHHHhhhhcccCCCCCccccHHHHHHHh
Q 025569 145 ARERLRAARVLSRYTETKASKSDMSSKVLDALK 177 (250)
Q Consensus 145 ARErLraARvL~ry~e~k~sk~e~gs~vLdAlr 177 (250)
.++|+||.+++.+|-...+..++.-..+|..|-
T Consensus 21 ~~~r~~~~~~~~~~n~~~~~~~~~r~~ll~~~~ 53 (182)
T d1ocxa_ 21 SRDRLRARQLIHRYNHSLAEEHTLRQQILADLF 53 (182)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhCCCCcchHHHHHHHHHhc
Confidence 457899999999998877777777777777663
No 3
>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.12 E-value=29 Score=21.29 Aligned_cols=11 Identities=18% Similarity=-0.052 Sum_probs=8.8
Q ss_pred CCCCCCCCCcc
Q 025569 186 SRLPEAPTNLF 196 (250)
Q Consensus 186 sglPeaP~Nlf 196 (250)
+|-|+.|+||-
T Consensus 1 ~g~Pp~~~~l~ 11 (101)
T d2cuia1 1 SGSRPRLSQLS 11 (101)
T ss_dssp CCCCCCCCCCE
T ss_pred CCCccCCCCcE
Confidence 58899998883
No 4
>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.57 E-value=26 Score=21.81 Aligned_cols=13 Identities=23% Similarity=0.519 Sum_probs=10.6
Q ss_pred ccCCCCCCCCCCc
Q 025569 183 KRRSRLPEAPTNL 195 (250)
Q Consensus 183 k~~sglPeaP~Nl 195 (250)
....|+|.+|.||
T Consensus 5 ~T~~~vP~~P~~~ 17 (102)
T d1x5za1 5 ITQTGVPGQPLNF 17 (102)
T ss_dssp CCCSCCCCCCEEE
T ss_pred ECCCCCCcCCCCe
Confidence 4567999999986
No 5
>d1pixa2 c.14.1.4 (A:1-287) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]}
Probab=11.61 E-value=35 Score=27.32 Aligned_cols=14 Identities=43% Similarity=0.586 Sum_probs=11.3
Q ss_pred CCCCCchHHHHHHH
Q 025569 138 SKRSPLTARERLRA 151 (250)
Q Consensus 138 ~kr~pltARErLra 151 (250)
-+|--||||||+..
T Consensus 55 ~~rgkltaReRI~~ 68 (287)
T d1pixa2 55 NKRGELTALQRIEK 68 (287)
T ss_dssp HHTTCCCHHHHHHH
T ss_pred HHhCCCCHHHHHHH
Confidence 45677999999975
No 6
>d1on3a1 c.14.1.4 (A:8-260) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]}
Probab=10.56 E-value=40 Score=26.41 Aligned_cols=35 Identities=23% Similarity=0.254 Sum_probs=19.6
Q ss_pred CCcccccCCCCCCCCcee--eecCCcceEEEeehhHH
Q 025569 193 TNLFDDSKRGLPKPGLTF--QFPGGMDLFVIAFSFVF 227 (250)
Q Consensus 193 ~NlfdDskRg~pKeg~tF--~fp~G~d~f~i~~SFv~ 227 (250)
..++++-+...|.+|.-. =.=.|-.+++++.=|.+
T Consensus 64 ~~~~~~~~~~~~~dgvV~G~G~I~gr~v~v~a~Dftv 100 (253)
T d1on3a1 64 TTLFGMDKAVVPADGVVTGRGTILGRPVHAASQDFTV 100 (253)
T ss_dssp CCTTTTTTCCCGGGGEEEEEEEETTEEEEEEEECTTT
T ss_pred hhhhhhhcccccCCcEEEEEEEEeceechhhhchhhh
Confidence 345666666666665332 13356666666666654
No 7
>d2a7sa1 c.14.1.4 (A:20-277) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=10.44 E-value=41 Score=26.51 Aligned_cols=13 Identities=54% Similarity=0.703 Sum_probs=10.5
Q ss_pred CCCCchHHHHHHH
Q 025569 139 KRSPLTARERLRA 151 (250)
Q Consensus 139 kr~pltARErLra 151 (250)
+|--||||||+..
T Consensus 34 ~~GkltaReRi~~ 46 (258)
T d2a7sa1 34 AKGKLTARERIYA 46 (258)
T ss_dssp HTTCCCHHHHHHH
T ss_pred HcCCCCHHHHHHH
Confidence 4667999999965
No 8
>d1vrga1 c.14.1.4 (A:1-251) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]}
Probab=10.27 E-value=42 Score=26.20 Aligned_cols=13 Identities=46% Similarity=0.532 Sum_probs=10.4
Q ss_pred CCCCchHHHHHHH
Q 025569 139 KRSPLTARERLRA 151 (250)
Q Consensus 139 kr~pltARErLra 151 (250)
+|--||||||+..
T Consensus 31 ~~GkltaReRi~~ 43 (251)
T d1vrga1 31 RAGKLTAWERLEL 43 (251)
T ss_dssp HTTCCCHHHHHHH
T ss_pred HcCCCCHHHHHHH
Confidence 4567899999975
No 9
>d1dfna_ g.9.1.1 (A:) Defensin HNP-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.10 E-value=36 Score=20.32 Aligned_cols=11 Identities=27% Similarity=0.591 Sum_probs=8.8
Q ss_pred eccccccceee
Q 025569 45 IKKRTWGFCRS 55 (250)
Q Consensus 45 ik~rr~g~~~s 55 (250)
--|||+|.|+-
T Consensus 11 agerrygtc~y 21 (30)
T d1dfna_ 11 AGERRYGTCIY 21 (30)
T ss_dssp TTCCEEEEEEE
T ss_pred cCccceeeEEE
Confidence 35899999985
No 10
>d1w94a1 c.51.1.2 (A:1-154) Probable ribosomal biogenesis protein {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=8.79 E-value=35 Score=25.83 Aligned_cols=28 Identities=25% Similarity=0.268 Sum_probs=23.6
Q ss_pred ccCCCCCCCCceeeecCCcceEEEeehhH
Q 025569 198 DSKRGLPKPGLTFQFPGGMDLFVIAFSFV 226 (250)
Q Consensus 198 DskRg~pKeg~tF~fp~G~d~f~i~~SFv 226 (250)
...||.| .|++|-+|.|+...|.+.+..
T Consensus 51 ~E~rg~P-~~l~ih~p~gpt~~f~l~~v~ 78 (154)
T d1w94a1 51 SERHGNP-ARITFLDERGGERGYILFNPS 78 (154)
T ss_dssp EEETTEE-EEEEEECTTSCEEEEEEEEEE
T ss_pred ECCCCCC-ceEEEEeCCCCcEEEEEeeEE
Confidence 3468999 699999999999998887764
Done!