Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>025572
MLMCCGGRVLAGLYPAKKPLIPYNYHGGNSRFRRLNSNWRCRASEPESSSFAPSIDAESA
DKNAAGFCIIEGPETVQDFAKMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELG
ISKEEQDNELPSFPSFIPFLPPLSAANLKVYYATCFSLIAGVILFGGLLAPSLELKLGIG
GTSYADFIQSVHLPMQLSQVDPIVASFSGGAVGVISALMIVEVNNVKQQEQKRCKYCLGT
GIFLNLSSIF

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025572
        (250 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2151556 - symbol:AT5G61670 "AT5G61670" species...   794  5.4e-79   1
TAIR|locus:2152845 - symbol:AT5G06130 species:3702 "Arabi...   591  1.7e-57   1


>TAIR|locus:2151556 [details] [associations]
            symbol:AT5G61670 "AT5G61670" species:3702 "Arabidopsis
            thaliana" [GO:0009536 "plastid" evidence=ISS] [GO:0009661
            "chromoplast organization" evidence=ISS] [GO:0016120 "carotene
            biosynthetic process" evidence=ISS] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB012239 eggNOG:NOG279301
            ProtClustDB:CLSN2686933 EMBL:AY065401 EMBL:AY094431 EMBL:AY117226
            EMBL:AY084568 EMBL:AY149953 IPI:IPI00531772 RefSeq:NP_200975.1
            RefSeq:NP_974975.1 UniGene:At.28655 ProteinModelPortal:Q9FKF4
            STRING:Q9FKF4 PaxDb:Q9FKF4 PRIDE:Q9FKF4 EnsemblPlants:AT5G61670.1
            EnsemblPlants:AT5G61670.2 GeneID:836289 KEGG:ath:AT5G61670
            TAIR:At5g61670 HOGENOM:HOG000265745 InParanoid:Q9FKF4 OMA:INEEQEH
            PhylomeDB:Q9FKF4 ArrayExpress:Q9FKF4 Genevestigator:Q9FKF4
            Uniprot:Q9FKF4
        Length = 307

 Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
 Identities = 167/237 (70%), Positives = 181/237 (76%)

Query:     7 GRVLAGLYPAKKPLIPYNYHGGNSRFRR-LNSNWRCRXXXXXXXXXXXXIDAES-ADKNA 64
             GR+L+  YP      PY +     +    L  N R R            +D+ES ADK A
Sbjct:     5 GRILSVSYPPD----PYTWRFSQYKLSSSLGRNRRLRWRFTALDPESSSLDSESSADKFA 60

Query:    65 AGFCIIEGPETVQDFAKMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKE 124
             +GFCIIEGPETVQDFAKM+LQEI DNIRSRRNKIFLHMEEVRRLRIQQRIKN ELGI  E
Sbjct:    61 SGFCIIEGPETVQDFAKMQLQEIQDNIRSRRNKIFLHMEEVRRLRIQQRIKNTELGIINE 120

Query:   125 EQDNEXXXXXXXXXXXXXXXAANLKVYYATCFSLIAGVILFGGLLAPSLELKLGIGGTSY 184
             EQ++E               AANLKVYYATCFSLIAG+ILFGGLLAP+LELKLGIGGTSY
Sbjct:   121 EQEHELPNFPSFIPFLPPLTAANLKVYYATCFSLIAGIILFGGLLAPTLELKLGIGGTSY 180

Query:   185 ADFIQSVHLPMQLSQVDPIVASFSGGAVGVISALMIVEVNNVKQQEQKRCKYCLGTG 241
             ADFIQS+HLPMQLSQVDPIVASFSGGAVGVISALM+VEVNNVKQQE KRCKYCLGTG
Sbjct:   181 ADFIQSLHLPMQLSQVDPIVASFSGGAVGVISALMVVEVNNVKQQEHKRCKYCLGTG 237


>TAIR|locus:2152845 [details] [associations]
            symbol:AT5G06130 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002688
            EMBL:AY072147 EMBL:AY133750 IPI:IPI00527561 RefSeq:NP_196231.2
            UniGene:At.9801 ProteinModelPortal:Q8VYD8 SMR:Q8VYD8 PaxDb:Q8VYD8
            PRIDE:Q8VYD8 EnsemblPlants:AT5G06130.2 GeneID:830500
            KEGG:ath:AT5G06130 TAIR:At5g06130 eggNOG:NOG279301
            InParanoid:Q8VYD8 OMA:PCARCSA ProtClustDB:CLSN2686933
            ArrayExpress:Q8VYD8 Genevestigator:Q8VYD8 Uniprot:Q8VYD8
        Length = 315

 Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
 Identities = 119/184 (64%), Positives = 140/184 (76%)

Query:    59 SADKNAAGFCIIEGPETVQDFAKMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAE 118
             S D     FCIIEG ETVQDF +M+LQEI DNIRSRRNKIFL MEEVRRLR+QQRIK+ +
Sbjct:    62 SGDTVPNNFCIIEGSETVQDFVQMQLQEIQDNIRSRRNKIFLLMEEVRRLRVQQRIKSVK 121

Query:   119 -LGISKEEQDNEXXXXXXXXXXXXXXXAANLKVYYATCFSLIAGVILFGGLLAPSLELKL 177
              +    E +  E                  LK  Y+T  +LI+G+I FGGL+AP+LELK+
Sbjct:   122 AINEDSELEATEMPEITSSIPFLPNVTPKTLKQLYSTSVALISGIIFFGGLIAPNLELKV 181

Query:   178 GIGGTSYADFIQSVHLPMQLSQVDPIVASFSGGAVGVISALMIVEVNNVKQQEQKRCKYC 237
             G+GGTSY DFI+S+HLP+QLSQVDPIVASFSGGAVGVIS LM++EVNNVKQQE+KRCKYC
Sbjct:   182 GLGGTSYEDFIRSLHLPLQLSQVDPIVASFSGGAVGVISTLMLIEVNNVKQQEKKRCKYC 241

Query:   238 LGTG 241
             LGTG
Sbjct:   242 LGTG 245


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.139   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      250       223   0.00098  112 3  11 22  0.49    32
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  167 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.25u 0.10s 19.35t   Elapsed:  00:00:01
  Total cpu time:  19.25u 0.10s 19.35t   Elapsed:  00:00:01
  Start:  Fri May 10 15:41:53 2013   End:  Fri May 10 15:41:54 2013

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