BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025572
(250 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3U1V8|M3K9_MOUSE Mitogen-activated protein kinase kinase kinase 9 OS=Mus musculus
GN=Map3k9 PE=2 SV=2
Length = 1077
Score = 35.0 bits (79), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 76 VQDFAKMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKEEQD 127
+QD K E+QE+ D +R++ ++ EE+ R +QQ KN E + + EQ+
Sbjct: 415 LQDDWKHEIQEMFDQLRAKEKELRTWEEELTRAALQQ--KNQEELLRRREQE 464
>sp|P80192|M3K9_HUMAN Mitogen-activated protein kinase kinase kinase 9 OS=Homo sapiens
GN=MAP3K9 PE=1 SV=3
Length = 1104
Score = 34.7 bits (78), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 76 VQDFAKMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKEEQD 127
+QD K E+QE+ D +R++ ++ EE+ R +QQ KN E + + EQ+
Sbjct: 422 LQDNWKHEIQEMFDQLRAKEKELRTWEEELTRAALQQ--KNQEELLRRREQE 471
>sp|Q5TCX8|M3KL4_HUMAN Mitogen-activated protein kinase kinase kinase MLK4 OS=Homo sapiens
GN=MLK4 PE=1 SV=1
Length = 1036
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 66 GFCIIEGPE----TVQDFAKMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGI 121
G + E P+ ++QD K+E+Q++ D +R++ ++ EE+ R +QQ+ + EL
Sbjct: 403 GAVMTEMPQESFHSMQDDWKLEIQQMFDELRTKEKELRSREEELTRAALQQKSQE-ELLK 461
Query: 122 SKEEQ 126
+E+Q
Sbjct: 462 RREQQ 466
>sp|O96133|YB145_PLAF7 Uncharacterized protein PFB0145c OS=Plasmodium falciparum (isolate
3D7) GN=PFB0145c PE=2 SV=1
Length = 1979
Score = 32.0 bits (71), Expect = 4.7, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 81 KMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKEEQDNEL 130
K E++ + NI+S N I + EEV L+ + +K +E+ + KEE D +L
Sbjct: 661 KQEMELLRGNIKSSEN-ILNNDEEVCDLKRKLSLKESEMKMMKEEHDKKL 709
>sp|P18187|PHNS_DESFR Periplasmic [NiFe] hydrogenase small subunit OS=Desulfovibrio
fructosovorans GN=hydA PE=1 SV=4
Length = 314
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 7/51 (13%)
Query: 47 ESSSFAPSIDAESADKNAAGFCIIE----GPETVQDFAKMELQEIHDNIRS 93
E+S FAPS D+E A K GFC+ E GP T + K+ +++ +++
Sbjct: 244 EASEFAPSFDSEEAKK---GFCLYELGCKGPVTYNNCPKVLFNQVNWPVQA 291
>sp|C4YJE1|ENOPH_CANAW Enolase-phosphatase E1 OS=Candida albicans (strain WO-1) GN=UTR4
PE=3 SV=1
Length = 271
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 84 LQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKEE--QDNEL--PSFPS---F 136
L+++ DNI I+ H + + I+ I + G+ ++ ++NEL P + F
Sbjct: 67 LKQLPDNITKSSESIYKHFKNLVDQDIKDPILKSLQGLIWKQGYENNELQAPIYQDSVEF 126
Query: 137 IPFLPPLSAANLKVYYATCFSLIAGVILFG 166
I P S+ N K+Y + S+ A ++LFG
Sbjct: 127 IESFPTKSSTNNKIYIYSSGSIKAQILLFG 156
>sp|Q5AM80|ENOPH_CANAL Enolase-phosphatase E1 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=UTR4 PE=3 SV=1
Length = 265
Score = 31.2 bits (69), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 84 LQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKEE--QDNEL--PSFPSFIPF 139
L+++ DNI I+ H + + I+ I + G+ ++ + NEL P + I F
Sbjct: 67 LKQLPDNITKSSESIYKHFKNLVDQDIKDPILKSLQGLIWKQGYEKNELQAPIYQDSIEF 126
Query: 140 L---PPLSAANLKVYYATCFSLIAGVILFGGL 168
+ P S+ N K+Y + S+ A ++LFG +
Sbjct: 127 IESFPTKSSTNNKIYIYSSGSIKAQILLFGHV 158
>sp|O88943|KCNQ2_RAT Potassium voltage-gated channel subfamily KQT member 2 OS=Rattus
norvegicus GN=Kcnq2 PE=2 SV=1
Length = 852
Score = 31.2 bits (69), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 25 YHGGN---SRFRRLNSNWRCRASEP-----ESSSFAPSIDAESADKNAAGFCIIEGPETV 76
Y GGN + F RL CR SE ++S PS+D E +++ +GF I + E +
Sbjct: 735 YSGGNRASTEFLRLEGTPACRPSEAALRDSDTSISIPSVDHEELERSFSGFSISQSKENL 794
Query: 77 QDFA 80
A
Sbjct: 795 NALA 798
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,749,523
Number of Sequences: 539616
Number of extensions: 3581951
Number of successful extensions: 9768
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 9766
Number of HSP's gapped (non-prelim): 11
length of query: 250
length of database: 191,569,459
effective HSP length: 115
effective length of query: 135
effective length of database: 129,513,619
effective search space: 17484338565
effective search space used: 17484338565
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)