Query 025573
Match_columns 250
No_of_seqs 17 out of 19
Neff 2.8
Searched_HMMs 13730
Date Mon Mar 25 13:04:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025573.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025573hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ivxa1 a.74.1.1 (A:7-149) Cyc 20.0 31 0.0022 24.3 2.7 25 174-198 69-93 (143)
2 d2i53a1 a.74.1.1 (A:14-157) Cy 19.6 26 0.0019 24.9 2.2 23 174-196 75-97 (144)
3 d2nptb1 d.15.2.2 (B:42-123) Mi 17.2 11 0.00084 27.1 -0.3 20 127-149 34-53 (82)
4 d2c60a1 d.15.2.2 (A:43-122) Mi 16.8 13 0.00091 26.8 -0.2 20 127-149 34-53 (80)
5 d2i53a2 a.74.1.1 (A:158-267) C 16.1 87 0.0063 21.5 4.3 53 176-228 44-105 (110)
6 d1bu2a1 a.74.1.1 (A:22-148) Vi 15.9 42 0.0031 23.8 2.6 22 177-198 72-93 (127)
7 d1g3nc1 a.74.1.1 (C:16-147) Vi 14.1 42 0.003 23.9 2.1 22 177-198 77-98 (132)
8 d1w98b2 a.74.1.1 (B:88-227) G1 12.8 41 0.003 24.0 1.8 23 178-200 86-108 (140)
9 d1f5qb1 a.74.1.1 (B:6-146) Vir 10.8 60 0.0044 23.4 2.1 23 177-199 85-107 (141)
10 d1ju8a_ g.3.6.4 (A:) Leginsuli 10.4 12 0.00086 23.5 -1.7 21 132-153 10-30 (37)
No 1
>d2ivxa1 a.74.1.1 (A:7-149) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.00 E-value=31 Score=24.30 Aligned_cols=25 Identities=12% Similarity=0.119 Sum_probs=21.3
Q ss_pred CCCchHHHHHHHHHHHhhcCCCCCC
Q 025573 174 AEVPWHLIAIGIFFTVIKLPGPYYP 198 (250)
Q Consensus 174 ~~~pwhLl~i~~fF~liK~~gpy~p 198 (250)
.+..+++++++|+|...|+-.++-+
T Consensus 69 ~~~~~~~va~acl~LA~K~eE~~~~ 93 (143)
T d2ivxa1 69 TKFNKNIISSTALFLAAKVEEQARK 93 (143)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCHHHHHHHHHHHHHHhcccccc
Confidence 3467999999999999999998644
No 2
>d2i53a1 a.74.1.1 (A:14-157) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.60 E-value=26 Score=24.94 Aligned_cols=23 Identities=13% Similarity=0.104 Sum_probs=19.8
Q ss_pred CCCchHHHHHHHHHHHhhcCCCC
Q 025573 174 AEVPWHLIAIGIFFTVIKLPGPY 196 (250)
Q Consensus 174 ~~~pwhLl~i~~fF~liK~~gpy 196 (250)
.+...++++++|+|...|+-...
T Consensus 75 ~~~~~~lva~acl~LA~K~eE~~ 97 (144)
T d2i53a1 75 KQFPRYVTGACCLFLAGKVEETP 97 (144)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTCC
T ss_pred cchhHHHHHHHHHHHHHHhhccc
Confidence 45679999999999999998763
No 3
>d2nptb1 d.15.2.2 (B:42-123) Mitogen-activated protein kinase kinase kinase 2, MEKK 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.17 E-value=11 Score=27.13 Aligned_cols=20 Identities=15% Similarity=0.458 Sum_probs=16.0
Q ss_pred Hhhhhchhhhhhhccceeeeehh
Q 025573 127 AVSSLSEMSYCAHEKKLFLVPVP 149 (250)
Q Consensus 127 avSsLSEmsYc~~~nKel~IPig 149 (250)
|+---.||-|| |.|+.||+-
T Consensus 34 afGq~ldl~y~---n~EL~IPl~ 53 (82)
T d2nptb1 34 AFGQSMDLHYT---NNELVIPLT 53 (82)
T ss_dssp HHTSCEEEEEE---ETTEEEECC
T ss_pred HhCCeeeEEEe---cCeEEEecc
Confidence 34556799999 889999974
No 4
>d2c60a1 d.15.2.2 (A:43-122) Mitogen-activated protein kinase kinase kinase 3, MEKK 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.85 E-value=13 Score=26.81 Aligned_cols=20 Identities=5% Similarity=0.157 Sum_probs=15.9
Q ss_pred Hhhhhchhhhhhhccceeeeehh
Q 025573 127 AVSSLSEMSYCAHEKKLFLVPVP 149 (250)
Q Consensus 127 avSsLSEmsYc~~~nKel~IPig 149 (250)
|+---.||-|| |.|+.||+-
T Consensus 34 afGq~ldl~y~---n~El~IPl~ 53 (80)
T d2c60a1 34 VFGQPLDLHYM---NNELSILLK 53 (80)
T ss_dssp HHSSCCEEEEE---CSSCEEECC
T ss_pred HhCCeeeeEEe---cCeEEEecc
Confidence 34556799999 999999974
No 5
>d2i53a2 a.74.1.1 (A:158-267) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.07 E-value=87 Score=21.52 Aligned_cols=53 Identities=17% Similarity=0.185 Sum_probs=35.4
Q ss_pred CchHHHHHHHHHHHhhcCCCC---------CCCcccccceecchhHHHHHHHHHHHHhcCcc
Q 025573 176 VPWHLIAIGIFFTVIKLPGPY---------YPYWGRLFIPHFANGALWRTLWFAFLWYRKPK 228 (250)
Q Consensus 176 ~pwhLl~i~~fF~liK~~gpy---------~p~wgriflpHfANGgL~q~Lw~~~lW~~~~k 228 (250)
+|=|.||+||++...|+.|-= .+.|=.+|-+.+.-..+..+.=-....|.+.|
T Consensus 44 ~~P~~IA~a~I~lA~~~~~~~ip~~~~~~~~~~W~~~f~~dvt~e~i~~i~~~il~lY~~~k 105 (110)
T d2i53a2 44 WEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGK 105 (110)
T ss_dssp SCHHHHHHHHHHHHHHHHTCCGGGGBSSCCSSCGGGGTSSSCCHHHHHHHHHHHHTTTSSSC
T ss_pred cCcHHHHHHHHHHHHHHhCCCCCCcccCcccccHHHHHHccCCHHHHHHHHHHHHHHHcccc
Confidence 566889999999998887632 23466677667666666666554445565433
No 6
>d1bu2a1 a.74.1.1 (A:22-148) Viral cyclin {Herpesvirus saimiri [TaxId: 10381]}
Probab=15.90 E-value=42 Score=23.83 Aligned_cols=22 Identities=9% Similarity=-0.109 Sum_probs=19.1
Q ss_pred chHHHHHHHHHHHhhcCCCCCC
Q 025573 177 PWHLIAIGIFFTVIKLPGPYYP 198 (250)
Q Consensus 177 pwhLl~i~~fF~liK~~gpy~p 198 (250)
..+|+|++|+|+..|+-..+-|
T Consensus 72 ~lqLi~~tcL~IAsK~ee~~~~ 93 (127)
T d1bu2a1 72 TLQKIGAACVLIGSKIRTVKPM 93 (127)
T ss_dssp THHHHHHHHHHHHHHHSSSSCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCC
Confidence 4799999999999999887644
No 7
>d1g3nc1 a.74.1.1 (C:16-147) Viral cyclin {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=14.08 E-value=42 Score=23.90 Aligned_cols=22 Identities=9% Similarity=-0.025 Sum_probs=18.4
Q ss_pred chHHHHHHHHHHHhhcCCCCCC
Q 025573 177 PWHLIAIGIFFTVIKLPGPYYP 198 (250)
Q Consensus 177 pwhLl~i~~fF~liK~~gpy~p 198 (250)
.++|+|++|+|+..|+-..+=|
T Consensus 77 ~lqLia~tcl~iAsK~ee~~~~ 98 (132)
T d1g3nc1 77 HFQKTGSACLLVASKLRSLTPI 98 (132)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHHHHhcccCCC
Confidence 3799999999999999776543
No 8
>d1w98b2 a.74.1.1 (B:88-227) G1/S-specific cyclin-E1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.81 E-value=41 Score=24.05 Aligned_cols=23 Identities=35% Similarity=0.466 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCc
Q 025573 178 WHLIAIGIFFTVIKLPGPYYPYW 200 (250)
Q Consensus 178 whLl~i~~fF~liK~~gpy~p~w 200 (250)
..|+|++|+|+..|+--.+-|..
T Consensus 86 lqL~a~acL~IAsK~ee~~~~~~ 108 (140)
T d1w98b2 86 LQLIGISSLFIAAKLEEIYPPKL 108 (140)
T ss_dssp HHHHHHHHHHHHHHHHCSSCCCH
T ss_pred HhHHHHHHHHHHHHHcccCCCCH
Confidence 68999999999999987765543
No 9
>d1f5qb1 a.74.1.1 (B:6-146) Viral cyclin {Murine herpesvirus 68 [TaxId: 33708]}
Probab=10.81 E-value=60 Score=23.39 Aligned_cols=23 Identities=9% Similarity=-0.148 Sum_probs=19.6
Q ss_pred chHHHHHHHHHHHhhcCCCCCCC
Q 025573 177 PWHLIAIGIFFTVIKLPGPYYPY 199 (250)
Q Consensus 177 pwhLl~i~~fF~liK~~gpy~p~ 199 (250)
..+|+|++|+|+..|+-..+-|.
T Consensus 85 ~lqL~a~tcL~IAsK~ee~~~~~ 107 (141)
T d1f5qb1 85 NYQSTAAVALHIAGKVRAYMPIK 107 (141)
T ss_dssp GHHHHHHHHHHHHHHHHCSSCCC
T ss_pred HHHHHHHHHHHHHHHHHhcCccc
Confidence 48999999999999998876554
No 10
>d1ju8a_ g.3.6.4 (A:) Leginsulin {Soybean (Glycine max) [TaxId: 3847]}
Probab=10.39 E-value=12 Score=23.54 Aligned_cols=21 Identities=29% Similarity=0.565 Sum_probs=13.1
Q ss_pred chhhhhhhccceeeeehhHHHH
Q 025573 132 SEMSYCAHEKKLFLVPVPLLIG 153 (250)
Q Consensus 132 SEmsYc~~~nKel~IPigLl~G 153 (250)
-||-=|-+ ..-.-||+||++|
T Consensus 10 FemPpc~s-~dCRCiP~gL~vG 30 (37)
T d1ju8a_ 10 FEVPPCRS-RDCRCVPIGLFVG 30 (37)
T ss_dssp SSSSSSSC-TTSEEEECSSSCE
T ss_pred cccCCCCC-CCceEEEeEEEEE
Confidence 34555544 3346788888877
Done!