BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025577
(250 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum
lycopersicum GN=CAB6A PE=2 SV=1
Length = 246
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/251 (81%), Positives = 217/251 (86%), Gaps = 7/251 (2%)
Query: 1 MASNTLMSCGIATTAFPSVLSSSKSKFFTAVSL-PAAANATSKYAMSADWMPGEPRPPYL 59
MASNTLMSCGI PS LSS+KSKF A+ + A N S+++MSADWMPG+PRP YL
Sbjct: 1 MASNTLMSCGIPAVC-PSFLSSTKSKFAAAMPVYVGATNFMSRFSMSADWMPGQPRPSYL 59
Query: 60 DGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGLGNWV 119
DGSAPGDFGFD L LGEVP NLERYKESELIHCRWAMLAV I+VPEALGLGNWV
Sbjct: 60 DGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPG-----IIVPEALGLGNWV 114
Query: 120 QAQEWAAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFD 179
+AQEWAA+PGGQATYLG PVPWGTLPTIL IEFL+IAFVEHQRSMEKD EKKKYPGGAFD
Sbjct: 115 KAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFD 174
Query: 180 PLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 239
PLG+SKDP KFEE KVKEIKNGRLALLA VGFCVQQSAY GTGPLENLATHLADPWHNNI
Sbjct: 175 PLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNI 234
Query: 240 GDVIIPRGIVP 250
GDVIIP+GI P
Sbjct: 235 GDVIIPKGIFP 245
>sp|Q01667|CAB6_ARATH Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis
thaliana GN=LHCA1 PE=1 SV=1
Length = 241
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/246 (82%), Positives = 217/246 (88%), Gaps = 8/246 (3%)
Query: 1 MASNTLMSCGIATTAFPSVLSSSKSKFFTA-VSLPAAANATSKYAMSADWMPGEPRPPYL 59
MASN+LMSCGIA +PS+LSSSKSKF +A V LP A N + M+A WMPGEPRP YL
Sbjct: 1 MASNSLMSCGIAAV-YPSLLSSSKSKFVSAGVPLPNAGN-VGRIRMAAHWMPGEPRPAYL 58
Query: 60 DGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGLGNWV 119
DGSAPGDFGFDPL LGEVP NLERYKESELIHCRWAMLAV ILVPEALG GNWV
Sbjct: 59 DGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPG-----ILVPEALGYGNWV 113
Query: 120 QAQEWAAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFD 179
+AQEWAA+PGGQATYLG PVPWGTLPTIL IEFL+IAFVEHQRSMEKDPEKKKYPGGAFD
Sbjct: 114 KAQEWAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFD 173
Query: 180 PLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 239
PLG+SKDP+K EE KVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI
Sbjct: 174 PLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 233
Query: 240 GDVIIP 245
GD++IP
Sbjct: 234 GDIVIP 239
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum
vulgare GN=LHC Ib-21 PE=1 SV=1
Length = 245
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/247 (70%), Positives = 199/247 (80%), Gaps = 7/247 (2%)
Query: 2 ASNTLMSCGIATTAFPSVLSSSKSKFFTAVSLPAAANATSKYAMSADWMPGEPRPPYLDG 61
+S+ L SC + PS+L+ S + + A A + + MSA+W PG+PRP +LDG
Sbjct: 3 SSSGLRSC--SAVGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEWFPGQPRPAHLDG 60
Query: 62 SAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGLGNWVQA 121
S+PGDFGFDPL L VPEN ER+KESE+ HCRWAML V +LVPEALGLGNWV+A
Sbjct: 61 SSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG-----VLVPEALGLGNWVKA 115
Query: 122 QEWAAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPL 181
QEWAA+P GQATYLG PVPWG LPTIL IEFL+IAF E QR+MEKDPEKKKYPGGAFDPL
Sbjct: 116 QEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAFDPL 175
Query: 182 GFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD 241
GFSKDP KFEE K+KEIKNGRLA+LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD
Sbjct: 176 GFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD 235
Query: 242 VIIPRGI 248
++IPR I
Sbjct: 236 IVIPRNI 242
>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1
Length = 287
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 134/271 (49%), Gaps = 58/271 (21%)
Query: 22 SSKSKFFTAVSLPAAANATSKYAMSAD-----WMPGEPRPPYLDGSAPGDFGFDPLRLGE 76
SS S FTA A+ K A + W PG P YLDGS GD+GFDP LG+
Sbjct: 23 SSNSSRFTARFGFGTKKASPKKAKTVISDRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGK 82
Query: 77 VPE-------------------------------------------NLERYKESELIHCR 93
E L+R++E ELIH R
Sbjct: 83 PAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGR 142
Query: 94 WAMLAVVSSKFFWILVPEALGLGNWVQAQEWAAVPGGQATYLGTPVPWGTLPTILVIEFL 153
WAMLA + + + E L W A + V G ++YLG P+P+ ++ T++ IE L
Sbjct: 143 WAMLATLGA-----ITVEWLTGVTWQDAGKVELVDG--SSYLGQPLPF-SISTLIWIEVL 194
Query: 154 SIAFVEHQRSMEKDPEKKKYPGGAF-DPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFC 212
I ++E QR+ E D EK+ YPGG F DPLG + DP K + ++ EIK+ RLA++ F+GF
Sbjct: 195 VIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFA 254
Query: 213 VQQSAYPGTGPLENLATHLADPWHNNIGDVI 243
VQ +A G GPL N ATHL+DP H I D
Sbjct: 255 VQAAA-TGKGPLNNWATHLSDPLHTTIIDTF 284
>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1
Length = 290
Score = 147 bits (372), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 125/238 (52%), Gaps = 53/238 (22%)
Query: 49 WMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLE-------------------------- 82
W PG P +LDGS GD+GFDP LG+ E L+
Sbjct: 58 WYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAA 117
Query: 83 -----------------RYKESELIHCRWAMLAVVSSKFFWILVPEALGLGNWVQAQEWA 125
R++E ELIH RWAMLA + + L E L W A +
Sbjct: 118 DAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGA-----LSVEWLTGVTWQDAGKVE 172
Query: 126 AVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAF-DPLGFS 184
V G ++YLG P+P+ ++ T++ IE L I ++E QR+ E D EK+ YPGG F DPLG +
Sbjct: 173 LVDG--SSYLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLA 229
Query: 185 KDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDV 242
DP+K + ++ EIK+ RLA++AF+GF VQ +A G GPL N ATHL+DP H I D
Sbjct: 230 ADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAA-TGKGPLNNWATHLSDPLHTTIIDT 286
>sp|P27521|CA4_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis
thaliana GN=LHCA4 PE=1 SV=1
Length = 251
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 129/248 (52%), Gaps = 40/248 (16%)
Query: 14 TAFPSVLSSSKSKF-----FTAVSLPAAANATSKYAMSADWMPGEPRPPYLDGSAPGDFG 68
T+ P L+ S + FT++ A ++ A +W+PG P YL GS GD G
Sbjct: 17 TSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNG 76
Query: 69 FDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGLGNWVQAQEWAAVP 128
FDPL L E PENL+ + ++EL++ RWAML V +L+PE + EW
Sbjct: 77 FDPLGLAEDPENLKWFVQAELVNGRWAMLGVAG-----MLLPEVFTKIGIINVPEW--YD 129
Query: 129 GGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQR--------SMEKDPEKKK-------- 172
G+ Y + T+ VIEF+ +VE +R S+ +DP K+
Sbjct: 130 AGKEQYFASS------STLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEV 183
Query: 173 -YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHL 231
YPGG F+PL F+ +E K KE+ NGRLA+LAF+GF VQ + G GP ENL HL
Sbjct: 184 GYPGGIFNPLNFAPT----QEAKEKELANGRLAMLAFLGFVVQHNV-TGKGPFENLLQHL 238
Query: 232 ADPWHNNI 239
+DPWHN I
Sbjct: 239 SDPWHNTI 246
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 140 bits (354), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 108/195 (55%), Gaps = 11/195 (5%)
Query: 52 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPE 111
GEP P YL G PGD+G+D L PE R +E E+IHCRWAML + F +L
Sbjct: 63 GEP-PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARN 121
Query: 112 ALGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEKD 167
+ G W +A GG YLG P V ++ I + + + VE R +
Sbjct: 122 GVKFGEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEG 180
Query: 168 P----EKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGP 223
P E YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GP
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGP 239
Query: 224 LENLATHLADPWHNN 238
LENLA HLADP +NN
Sbjct: 240 LENLADHLADPVNNN 254
>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum
lycopersicum GN=CAB7 PE=3 SV=1
Length = 270
Score = 140 bits (353), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 127/260 (48%), Gaps = 45/260 (17%)
Query: 18 SVLSSSKSKFFTAVSLPAAANATSKYAMSAD------------WMPGEPRPPYLDGSAPG 65
S++ ++K+ F L + +T+ A SA W PG PP+LDGS PG
Sbjct: 25 SIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPG 84
Query: 66 DFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGLGNWVQAQEWA 125
DFGFDPL L PE+L +++EL+HCRWAML I +PE L + W
Sbjct: 85 DFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAG-----IFIPELLTKIGILNTPSWY 139
Query: 126 AVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQR--------SMEKDP--------- 168
G Q + T T+ ++E + I + E +R + DP
Sbjct: 140 TA-GEQEYFTDT-------TTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTG 191
Query: 169 EKKKYPGGA-FDPLGF-SKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLEN 226
YPGG FDPLG+ S P K +E + KEIKNGRLA+LA +G Q Y GTGP++N
Sbjct: 192 TDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQH-IYTGTGPIDN 250
Query: 227 LATHLADPWHNNIGDVIIPR 246
L HLADP H I P+
Sbjct: 251 LFAHLADPGHATIFAAFSPK 270
>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum
GN=lhcA-P4 PE=1 SV=1
Length = 252
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 130/252 (51%), Gaps = 43/252 (17%)
Query: 9 CGIATTAFPSVLSSSKSKFFTAVSL-PAAANATSKYAMSA---DWMPGEPRPPYLDGSAP 64
CG+ + L S K V+ P + ++ + + A +W+PG P YL GS P
Sbjct: 16 CGLKS----RFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLP 71
Query: 65 GDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGLGNWVQAQEW 124
GD GFDPL L E PENL + ++EL++ RWAML V +L+PE + +W
Sbjct: 72 GDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAG-----MLLPEVFTSIGIINVPKW 126
Query: 125 AAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQR--------SMEKDPEKKK---- 172
A G+ Y + T+ VIEF+ +VE +R S+ +DP K+
Sbjct: 127 YAA--GKEEYFASS------STLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 178
Query: 173 -----YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENL 227
YPGG F+PL F+ E K KEI NGRLA+LAF+GF +Q + G GP +NL
Sbjct: 179 AGEVGYPGGIFNPLNFAPT----LEAKEKEIANGRLAMLAFLGFIIQHNV-TGKGPFDNL 233
Query: 228 ATHLADPWHNNI 239
H++DPWHN I
Sbjct: 234 LQHISDPWHNTI 245
>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)
OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1
Length = 231
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 110/204 (53%), Gaps = 20/204 (9%)
Query: 49 WMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWIL 108
W+PG P YLDGS GD GFDPL L E PE+L + ++++++ RWAML V +L
Sbjct: 36 WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAG-----ML 90
Query: 109 VPEALGLGNWVQAQEWAAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSMEKDP 168
+PE L + A EW +PG + + + + +E +++ S+ +DP
Sbjct: 91 IPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSSTYVEIRRWQDIKNPGSVNQDP 150
Query: 169 EKKK---------YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYP 219
K YPG F+PL F+ E K KE+ NGRLA+LAF+GF VQ + +
Sbjct: 151 IFKSYSLPPHECGYPGRVFNPLNFAP-----LENKEKELANGRLAMLAFLGFLVQHNVH- 204
Query: 220 GTGPLENLATHLADPWHNNIGDVI 243
G GP ENL HLADPWHN I I
Sbjct: 205 GKGPFENLQQHLADPWHNTIIQTI 228
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 131/268 (48%), Gaps = 41/268 (15%)
Query: 6 LMSCGIATTAFPS-VLSSSKSKFFTAVSLPAAANATSKYAM----------SADWMP--- 51
+ SCGI + AF +SS K + + A + ++ M SA P
Sbjct: 1 MASCGIGSCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYG 60
Query: 52 -----------GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVV 100
GEP P YL G PGD+G+D L PEN + +E E+IHCRWAML +
Sbjct: 61 PDRVLYLGPFSGEP-PSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGAL 119
Query: 101 SSKFFWILVPEALGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIA 156
F +L + G W +A GG YLG P V ++ I + + +
Sbjct: 120 GCVFPELLARNGVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLVHAQSILAIWACQVILMG 178
Query: 157 FVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVG 210
VE R DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + G
Sbjct: 179 AVEGYRIAGGPLGEVTDP---IYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 235
Query: 211 FCVQQSAYPGTGPLENLATHLADPWHNN 238
F V Q+ G GP+ENLA HLADP +NN
Sbjct: 236 FFV-QAIVTGKGPIENLADHLADPVNNN 262
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 104/193 (53%), Gaps = 9/193 (4%)
Query: 53 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEA 112
E P YL G PGD+G+D L PE R +E E+IHCRWAML + F IL
Sbjct: 63 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNG 122
Query: 113 LGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK-- 166
+ G W +A GG YLG P + ++ I + + + FVE R
Sbjct: 123 VTFGEAVWFKAGSQIFSEGG-LDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPL 181
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
+ K YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GP+E
Sbjct: 182 GEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIE 240
Query: 226 NLATHLADPWHNN 238
NL H+ADP NN
Sbjct: 241 NLYDHVADPVANN 253
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 104/193 (53%), Gaps = 9/193 (4%)
Query: 53 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEA 112
E P YL G PGD+G+D L PE R +E E+IHCRWAML + F IL
Sbjct: 63 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNG 122
Query: 113 LGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK-- 166
+ G W +A GG YLG P V ++ I + + + FVE R
Sbjct: 123 VKFGEAVWFKAGSQIFSEGG-LDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPL 181
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
+ K YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GP+E
Sbjct: 182 GEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIE 240
Query: 226 NLATHLADPWHNN 238
NL+ H+ DP NN
Sbjct: 241 NLSDHINDPVANN 253
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 105/193 (54%), Gaps = 9/193 (4%)
Query: 53 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEA 112
E P YL G PGD+G+D L PE R +E E+IHCRWAML + F IL
Sbjct: 35 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNG 94
Query: 113 LGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK-- 166
+ G W +A GG YLG P + ++ I + + + FVE R
Sbjct: 95 VTFGEAVWFKAGSQIFSEGG-LDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPL 153
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
+ K YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GP+E
Sbjct: 154 GEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIE 212
Query: 226 NLATHLADPWHNN 238
NL+ H+ADP NN
Sbjct: 213 NLSDHIADPVANN 225
>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida
PE=2 SV=1
Length = 270
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 128/260 (49%), Gaps = 45/260 (17%)
Query: 18 SVLSSSKSKFFTAVSL-------PAAANATSKYAMSAD-----WMPGEPRPPYLDGSAPG 65
S++ ++K+ F L P + + + A++AD W PG P +LDGS PG
Sbjct: 25 SIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPG 84
Query: 66 DFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGLGNWVQAQEWA 125
DFGFDPL LG PE+L+ ++EL+H RWAML I +PE L + W
Sbjct: 85 DFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAG-----IFIPEFLTKIGVLNTPSWY 139
Query: 126 AVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQR--------SMEKDP--------- 168
G Q + T T+ VIE + I + E +R + DP
Sbjct: 140 TA-GEQEYFTDT-------TTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTG 191
Query: 169 EKKKYPGGA-FDPLGF-SKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLEN 226
YPGG FDPLG+ S P K +E + KEIKNGRLA+LA +G Q Y GTGP++N
Sbjct: 192 TDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQH-IYTGTGPIDN 250
Query: 227 LATHLADPWHNNIGDVIIPR 246
L HLADP H I P+
Sbjct: 251 LFAHLADPGHATIFAAFSPK 270
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 134 bits (338), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 2 ASNTLMSCGIATTAFPSVLSSSKSKFFTAVSLPAAANATSKYAMSADW-----------M 50
AS T +S A A SSS+ V++ AN + + W
Sbjct: 3 ASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPF 62
Query: 51 PGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVP 110
GE P YL G PGD+G+D L PE + +E E+IHCRWAML + F +L
Sbjct: 63 SGE-SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 121
Query: 111 EALGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK 166
+ G W +A GG YLG P V ++ I + + + VE R +
Sbjct: 122 NGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGE 180
Query: 167 ------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPG 220
DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G
Sbjct: 181 PLGEVVDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QALVTG 236
Query: 221 TGPLENLATHLADPWHNN 238
GPLENLA HLADP +NN
Sbjct: 237 KGPLENLADHLADPVNNN 254
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 133 bits (335), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 103/191 (53%), Gaps = 10/191 (5%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE R +E E+IH RWAML + F +L +
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKF 126
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEKDP--- 168
G W +A GG YLG P V ++ I + + + VE R P
Sbjct: 127 GEAVWFKAGSQIFSDGGL-DYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 185
Query: 169 -EKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENL 227
E YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GP+ENL
Sbjct: 186 AEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENL 244
Query: 228 ATHLADPWHNN 238
A HLADP +NN
Sbjct: 245 ADHLADPVNNN 255
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 133 bits (335), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 103/191 (53%), Gaps = 10/191 (5%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE R +E E+IH RWAML + F +L +
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKF 126
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEKDP--- 168
G W +A GG YLG P V ++ I + + + VE R P
Sbjct: 127 GEAVWFKAGSQIFSDGGL-DYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 185
Query: 169 -EKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENL 227
E YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GP+ENL
Sbjct: 186 AEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENL 244
Query: 228 ATHLADPWHNN 238
A HLADP +NN
Sbjct: 245 ADHLADPVNNN 255
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 103/191 (53%), Gaps = 10/191 (5%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE R +E E+IH RWAML + F +L +
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKF 126
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEKDP--- 168
G W +A GG YLG P V ++ I + + + VE R P
Sbjct: 127 GEAVWFKAGSQIFSDGGL-DYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 185
Query: 169 -EKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENL 227
E YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GP+ENL
Sbjct: 186 AEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENL 244
Query: 228 ATHLADPWHNN 238
A HLADP +NN
Sbjct: 245 ADHLADPVNNN 255
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 105/193 (54%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE + +E E+IHCRWAML + F +L +
Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 166
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 128 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 186
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 187 VDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 242
Query: 226 NLATHLADPWHNN 238
NLA HLADP +NN
Sbjct: 243 NLADHLADPVNNN 255
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 105/193 (54%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE + +E E+IHCRWAML + F +L +
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 125
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 166
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 126 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 184
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 185 VDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 240
Query: 226 NLATHLADPWHNN 238
NLA HLADP +NN
Sbjct: 241 NLADHLADPVNNN 253
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 104/193 (53%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE + +E E+IHCRWAML + F +L +
Sbjct: 68 PSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 166
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 128 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 186
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 187 VDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 242
Query: 226 NLATHLADPWHNN 238
NLA HLADP +NN
Sbjct: 243 NLADHLADPVNNN 255
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 105/193 (54%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE + +E E+IHCRWAML + F +L +
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 126
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 166
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 127 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 185
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 186 VDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 241
Query: 226 NLATHLADPWHNN 238
NLA HLADP +NN
Sbjct: 242 NLADHLADPVNNN 254
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 104/193 (53%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE + +E E+IHCRWAML + F +L +
Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 166
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 128 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 186
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 187 VDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 242
Query: 226 NLATHLADPWHNN 238
NLA HLADP +NN
Sbjct: 243 NLADHLADPVNNN 255
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 105/193 (54%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE + +E E+IHCRWAML + F +L +
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 125
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 166
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 126 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 184
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 185 VDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 240
Query: 226 NLATHLADPWHNN 238
NLA HLADP +NN
Sbjct: 241 NLADHLADPVNNN 253
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 105/193 (54%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE + +E E+IHCRWAML + F +L +
Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 166
G W + GG YLG P V ++ I + + + VE R +
Sbjct: 128 GEAVWFKGGSQIFSQGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEV 186
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 187 VDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 242
Query: 226 NLATHLADPWHNN 238
NLA HLADP +NN
Sbjct: 243 NLADHLADPVNNN 255
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 108/199 (54%), Gaps = 16/199 (8%)
Query: 50 MPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILV 109
+ GEP P YL G PGD+G+D L PE + +E E+IH RWAML + F +L
Sbjct: 61 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 119
Query: 110 PEALGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSME 165
+ G W +A GG YLG P + ++ I ++ + + VE R
Sbjct: 120 RNGVKFGEAVWFKAGSQIFSEGGL-DYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 178
Query: 166 K------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYP 219
DP YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+
Sbjct: 179 GPLGEVVDP---LYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVT 234
Query: 220 GTGPLENLATHLADPWHNN 238
G GPLENLA HLADP +NN
Sbjct: 235 GKGPLENLADHLADPVNNN 253
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 104/193 (53%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE + +E E+IHCRWAML + F +L +
Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 166
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 128 GEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEV 186
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 187 VDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 242
Query: 226 NLATHLADPWHNN 238
NLA HLADP +NN
Sbjct: 243 NLADHLADPVNNN 255
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum
GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 108/199 (54%), Gaps = 16/199 (8%)
Query: 50 MPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILV 109
+ GEP P YL G PGD+G+D L PE + +E E+IHCRWAML + F +L
Sbjct: 62 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120
Query: 110 PEALGLG--NWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSME 165
+ G W +A GG YLG P V +L I + + + VE R
Sbjct: 121 RNGVKFGEAGWFKAGSQIFSDGG-LDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAG 179
Query: 166 K------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYP 219
DP YPGG+FDPLG ++ PQ F E KVKEIKNGRLA+ + GF V Q+
Sbjct: 180 GPLGEIVDP---LYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFV-QAIVT 235
Query: 220 GTGPLENLATHLADPWHNN 238
G GPLE+LA H+ADP +NN
Sbjct: 236 GKGPLEDLADHIADPVNNN 254
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 53 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEA 112
E P YL G PGD+G+D L PE R +E E+IHCRWAML + F IL
Sbjct: 63 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNG 122
Query: 113 LGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK-- 166
+ G W +A GG YLG P + ++ + + + + +E R
Sbjct: 123 VKFGEAVWFKAGSQIFSEGG-LDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPL 181
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
+ K YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GP+E
Sbjct: 182 GEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIE 240
Query: 226 NLATHLADPWHNN 238
NL H+ADP NN
Sbjct: 241 NLFDHVADPVANN 253
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 102/193 (52%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE + +E E+IHCRWAML + F IL +
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKF 125
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SME 165
G W +A GG YLG P + ++ I + + + FVE R
Sbjct: 126 GEAVWFKAGSQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEG 184
Query: 166 KDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGGAFDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GP+E
Sbjct: 185 LDP---IYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIE 240
Query: 226 NLATHLADPWHNN 238
NL HLADP NN
Sbjct: 241 NLFDHLADPVANN 253
>sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1
Length = 276
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 117/224 (52%), Gaps = 52/224 (23%)
Query: 49 WMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLE-------------------------- 82
W PG P +LDGS GD GFDP LG+ E L+
Sbjct: 59 WFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESS 118
Query: 83 -----------------RYKESELIHCRWAMLAVVSSKFFWILVPEALGLGNWVQAQEWA 125
R++E ELIH RWAML + + + EAL W A +
Sbjct: 119 EIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGA-----IAVEALTGIAWQDAGKVE 173
Query: 126 AVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGFSK 185
V G ++YLG P+P+ +L T++ IE L + ++E QR+ E DPEK+ YPGG FDPLG +
Sbjct: 174 LVEG--SSYLGQPLPF-SLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGGYFDPLGLAA 230
Query: 186 DPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAT 229
DP+K + K+ EIK+ RLA++AF+ F + Q+A+ G GP+ LAT
Sbjct: 231 DPEKLDTLKLAEIKHSRLAMVAFLIFAL-QAAFTGKGPVSFLAT 273
>sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis
thaliana GN=LHCB5 PE=2 SV=1
Length = 280
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 107/195 (54%), Gaps = 13/195 (6%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL+G GD+G+DP LG+ PEN +Y+ ELIH RWAML ++PEAL
Sbjct: 82 PEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAG-----FIIPEALNK 136
Query: 116 --GNWVQAQEW-----AAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSMEKDP 168
N W + G Y G +P + ++ L ++ + D
Sbjct: 137 YGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDF 196
Query: 169 EKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLA 228
E K +PGG FDPLG +KDP++ KVKEIKNGRLA+ A +GF + Q+ G GP+ENLA
Sbjct: 197 EDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFI-QAYVTGEGPVENLA 255
Query: 229 THLADPWHNNIGDVI 243
HL+DP+ NN+ VI
Sbjct: 256 KHLSDPFGNNLLTVI 270
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 103/193 (53%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE + +E E+IHCRWAML + F + +
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKF 126
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 166
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 127 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 185
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 186 IDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 241
Query: 226 NLATHLADPWHNN 238
NLA HLADP +NN
Sbjct: 242 NLADHLADPVNNN 254
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 53 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEA 112
E P YL G PGD+G+D L PE R +E E+IH RWAML + F IL
Sbjct: 61 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNG 120
Query: 113 LGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK-- 166
+ G W +A GG YLG P V ++ I ++ + + FVE R
Sbjct: 121 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPL 179
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
+ K YPGGAFDPLG + DP F E KVKE+KNGRLA+ + GF V Q+ G GP+E
Sbjct: 180 GEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIE 238
Query: 226 NLATHLADPWHNN 238
NL H+ADP NN
Sbjct: 239 NLFDHVADPVANN 251
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 53 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEA 112
E P YL G PGD+G+D L PE R +E E+IH RWAML + F IL
Sbjct: 61 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNG 120
Query: 113 LGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK-- 166
+ G W +A GG YLG P V ++ I ++ + + FVE R
Sbjct: 121 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPL 179
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
+ K YPGGAFDPLG + DP F E KVKE+KNGRLA+ + GF V Q+ G GP+E
Sbjct: 180 GEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIE 238
Query: 226 NLATHLADPWHNN 238
NL H+ADP NN
Sbjct: 239 NLFDHVADPVANN 251
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 104/193 (53%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE + +E E+IHCRWAML + F +L +
Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 166
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 128 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 186
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGG+FDPLG ++DP+ F E KVK IKNGRLA+ + GF V Q+ G GPLE
Sbjct: 187 VDP---LYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFV-QAIVTGKGPLE 242
Query: 226 NLATHLADPWHNN 238
NLA HLADP +NN
Sbjct: 243 NLADHLADPVNNN 255
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 108/199 (54%), Gaps = 16/199 (8%)
Query: 50 MPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILV 109
+ GEP P YL G PGD+G+D L PE + +E E+IH RWAML + F +L
Sbjct: 57 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 115
Query: 110 PEALGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSME 165
+ G W +A GG YLG P + ++ I ++ + + VE R
Sbjct: 116 RNGVKFGEAVWFKAGSQIFSEGGL-DYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 174
Query: 166 K------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYP 219
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+
Sbjct: 175 GPLGEVVDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVT 230
Query: 220 GTGPLENLATHLADPWHNN 238
G GPLENLA HLADP +NN
Sbjct: 231 GKGPLENLADHLADPVNNN 249
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 130 bits (328), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 104/193 (53%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE + +E E+IHCRWAML + F + +
Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKF 127
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SME 165
G W++A GG YLG P V ++ I + L + VE R +
Sbjct: 128 GEAVWLKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVV 186
Query: 166 KDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGG+FDPLG ++DP+ F E KVKE KNGRLA+ + GF + Q+ G GPLE
Sbjct: 187 VDP---LYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFI-QAIVTGKGPLE 242
Query: 226 NLATHLADPWHNN 238
NLA HL DP +NN
Sbjct: 243 NLADHLVDPVNNN 255
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 108/199 (54%), Gaps = 16/199 (8%)
Query: 50 MPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILV 109
+ GEP P YL G PGD+G+D L PE + +E E+IHCRWAML + F +L
Sbjct: 61 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 119
Query: 110 PEALGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSME 165
+ G W +A GG YLG P + ++ I + + + VE R
Sbjct: 120 RNGVKFGEAVWFKAGSQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 178
Query: 166 K------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYP 219
DP YPGG+FDPLG + DP+ F E KVKE+K GRLA+L+ GF V Q+
Sbjct: 179 GPLGEVVDP---LYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFV-QAIVT 234
Query: 220 GTGPLENLATHLADPWHNN 238
G GPLENLA H+ADP +NN
Sbjct: 235 GKGPLENLADHIADPVNNN 253
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 103/193 (53%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G P D+G+D L PE + +E E+IHCRWAML + F + +
Sbjct: 68 PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKF 127
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 166
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 128 GEAVWFKAGAQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 186
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLE
Sbjct: 187 IDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLE 242
Query: 226 NLATHLADPWHNN 238
NLA HLADP +NN
Sbjct: 243 NLADHLADPVNNN 255
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 103/193 (53%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE + +E E+IHCRWAML + F +L +
Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSME------ 165
G W +A GG YLG P V ++ I + + + +E R
Sbjct: 128 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEV 186
Query: 166 KDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPL+
Sbjct: 187 TDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLD 242
Query: 226 NLATHLADPWHNN 238
NL HLADP +NN
Sbjct: 243 NLVDHLADPVNNN 255
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 127 bits (320), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 53 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEA 112
E P YL G PGD+G+D L PE + +E E+IH RWAML + F +L
Sbjct: 62 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNG 121
Query: 113 LGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------ 162
+ G W +A GG YLG P V ++ I + + + +E R
Sbjct: 122 VQFGEAVWFKAGAQIFSEGG-LDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPL 180
Query: 163 SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTG 222
DP YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G G
Sbjct: 181 GEGLDP---LYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKG 236
Query: 223 PLENLATHLADPWHNN 238
P+ENLA H+ADP NN
Sbjct: 237 PIENLADHIADPVANN 252
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 127 bits (320), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 106/197 (53%), Gaps = 16/197 (8%)
Query: 52 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPE 111
GEP P YL G PGD+G+D L PE + +E E+IH RWAML + F +L
Sbjct: 53 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 111
Query: 112 ALGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR----- 162
+ G W +A GG YLG P V ++ I + + + VE R
Sbjct: 112 GVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 170
Query: 163 -SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGT 221
DP YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G
Sbjct: 171 LGEVTDP---IYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGK 226
Query: 222 GPLENLATHLADPWHNN 238
GPLENLA HLADP +NN
Sbjct: 227 GPLENLADHLADPVNNN 243
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 127 bits (320), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 52 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPE 111
GEP P YL G PGD+G+D L PE + +E E+IH RWAML + F +L
Sbjct: 76 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 134
Query: 112 ALGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK- 166
+ G W +A GG YLG+P + ++ I + + + +E R
Sbjct: 135 GVKFGEAVWFKAGAQIFSEGG-LDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGP 193
Query: 167 --DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPL 224
+ YPGG FDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GP+
Sbjct: 194 LGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPI 252
Query: 225 ENLATHLADPWHNN 238
ENLA HLADP +NN
Sbjct: 253 ENLADHLADPVNNN 266
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 103/193 (53%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE + +E E+IH RWAML + F +L +
Sbjct: 70 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 129
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 166
G W +A GG YLG P V ++ I + + + VE R
Sbjct: 130 GEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEV 188
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPLE
Sbjct: 189 VDP---LYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLE 244
Query: 226 NLATHLADPWHNN 238
NLA HLADP +NN
Sbjct: 245 NLADHLADPVNNN 257
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 105/193 (54%), Gaps = 15/193 (7%)
Query: 56 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPEALGL 115
P YL G PGD+G+D L PE + +E E+IH RWAML + F +L +
Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 124
Query: 116 GN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK----- 166
G W +A GG YLG P V ++ +I + + + VE R
Sbjct: 125 GEAVWFKAGSQIFSEGGL-DYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEI 183
Query: 167 -DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 225
DP YPGG+FDPLG ++DP++ E KVKE+KNGRLA+ + GF V Q+ G GPLE
Sbjct: 184 VDP---LYPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLE 239
Query: 226 NLATHLADPWHNN 238
NLA HLADP +NN
Sbjct: 240 NLADHLADPVNNN 252
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 106/197 (53%), Gaps = 16/197 (8%)
Query: 52 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPE 111
GEP P YL G PGD+G+D L PE + +E E+IH RWAML + F +L
Sbjct: 60 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 118
Query: 112 ALGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK- 166
+ G W +A GG YLG P + ++ I + + + VE R
Sbjct: 119 GVKFGEAVWFKAGSQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 177
Query: 167 -----DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGT 221
DP YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G
Sbjct: 178 LGEVVDP---LYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGK 233
Query: 222 GPLENLATHLADPWHNN 238
GPLENLA H+ADP +NN
Sbjct: 234 GPLENLADHIADPVNNN 250
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 106/199 (53%), Gaps = 16/199 (8%)
Query: 50 MPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILV 109
+ GEP P YL G PGD+G+D L PE + +E E+IH RWAML + F +L
Sbjct: 61 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 119
Query: 110 PEALGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSME 165
+ G W +A GG YLG P + ++ I + + + +E R
Sbjct: 120 RNGVKFGEAVWFKAGSQIFSEGGL-DYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAG 178
Query: 166 K------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYP 219
DP YPGG FDPLG + DP+ F + KVKE+KNGRLA+ + GF V Q+
Sbjct: 179 GPLGEVVDP---LYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFV-QAIVT 234
Query: 220 GTGPLENLATHLADPWHNN 238
G GPLENLA HLADP +NN
Sbjct: 235 GKGPLENLADHLADPVNNN 253
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 52 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVVSSKFFWILVPE 111
GEP P YL G PGD+G+D L PE + +E E+IH RWAML + F +L
Sbjct: 76 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 134
Query: 112 ALGLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK- 166
+ G W +A GG YLG+P + ++ I + + + +E R
Sbjct: 135 GVKFGEAVWFKAGAQIFSEGG-LDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGP 193
Query: 167 --DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPL 224
+ YPGG FDPLG + DP F + KVKEIKNGRLA+ + GF V Q+ G GP+
Sbjct: 194 LGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPI 252
Query: 225 ENLATHLADPWHNN 238
ENLA HLADP +NN
Sbjct: 253 ENLADHLADPVNNN 266
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,121,548
Number of Sequences: 539616
Number of extensions: 4500204
Number of successful extensions: 9399
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 9064
Number of HSP's gapped (non-prelim): 130
length of query: 250
length of database: 191,569,459
effective HSP length: 115
effective length of query: 135
effective length of database: 129,513,619
effective search space: 17484338565
effective search space used: 17484338565
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)