Citrus Sinensis ID: 025579
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 250 | ||||||
| 224069880 | 275 | predicted protein [Populus trichocarpa] | 0.996 | 0.905 | 0.749 | 1e-104 | |
| 255580495 | 408 | conserved hypothetical protein [Ricinus | 0.996 | 0.610 | 0.712 | 1e-100 | |
| 225467702 | 380 | PREDICTED: uncharacterized protein LOC10 | 0.976 | 0.642 | 0.653 | 1e-90 | |
| 356558985 | 388 | PREDICTED: uncharacterized protein LOC10 | 0.972 | 0.626 | 0.648 | 7e-86 | |
| 356504408 | 393 | PREDICTED: uncharacterized protein LOC10 | 0.972 | 0.618 | 0.636 | 1e-83 | |
| 449464112 | 388 | PREDICTED: uncharacterized protein LOC10 | 0.976 | 0.628 | 0.626 | 3e-83 | |
| 449527687 | 251 | PREDICTED: uncharacterized protein LOC10 | 0.976 | 0.972 | 0.626 | 8e-83 | |
| 357513325 | 372 | hypothetical protein MTR_8g012420 [Medic | 0.988 | 0.663 | 0.62 | 9e-83 | |
| 356566244 | 353 | PREDICTED: uncharacterized protein LOC10 | 0.912 | 0.645 | 0.584 | 7e-78 | |
| 297833518 | 371 | hypothetical protein ARALYDRAFT_896892 [ | 0.88 | 0.592 | 0.592 | 6e-75 |
| >gi|224069880|ref|XP_002303068.1| predicted protein [Populus trichocarpa] gi|222844794|gb|EEE82341.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/251 (74%), Positives = 214/251 (85%), Gaps = 2/251 (0%)
Query: 1 MYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIG 60
MYML+LYKFSEIRV LVPKLSRCIYNGRLEI PSKDWELESIH FEVLEM+REH+STVIG
Sbjct: 26 MYMLVLYKFSEIRVPLVPKLSRCIYNGRLEIRPSKDWELESIHSFEVLEMVREHVSTVIG 85
Query: 61 LRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHR 120
L+AN SV DSWATTE+QR RLGRVY ASILYGYFLKSASLR++LE CL HQD+HL HR
Sbjct: 86 LKANSSVADSWATTEVQRCRLGRVYAASILYGYFLKSASLRHHLEWCLVLPHQDIHLGHR 145
Query: 121 NSLQFPEAW-SYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRC 179
++LQFPE+ SYGL N V G ++N QS S G N + + E LKCY+MGFD ETLQRC
Sbjct: 146 STLQFPESLPSYGL-TNLVFGHISNKQSTSQGTRLNRPKSEHEKLKCYMMGFDSETLQRC 204
Query: 180 AKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEE 239
AKL+S+EAVNL+EKHSCALFGD +TG+L+ DEVILTSFSSLKRLVLEA+AFG FLWD EE
Sbjct: 205 AKLKSKEAVNLIEKHSCALFGDEKTGVLENDEVILTSFSSLKRLVLEAVAFGCFLWDTEE 264
Query: 240 YADAVYKLKEN 250
++VYKLK+N
Sbjct: 265 DVNSVYKLKDN 275
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255580495|ref|XP_002531072.1| conserved hypothetical protein [Ricinus communis] gi|223529318|gb|EEF31286.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|225467702|ref|XP_002272171.1| PREDICTED: uncharacterized protein LOC100251038 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356558985|ref|XP_003547782.1| PREDICTED: uncharacterized protein LOC100804253 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356504408|ref|XP_003520988.1| PREDICTED: uncharacterized protein LOC100793365 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449464112|ref|XP_004149773.1| PREDICTED: uncharacterized protein LOC101209314 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449527687|ref|XP_004170841.1| PREDICTED: uncharacterized protein LOC101230760 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357513325|ref|XP_003626951.1| hypothetical protein MTR_8g012420 [Medicago truncatula] gi|355520973|gb|AET01427.1| hypothetical protein MTR_8g012420 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356566244|ref|XP_003551344.1| PREDICTED: uncharacterized protein LOC100794032 [Glycine max] | Back alignment and taxonomy information |
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| >gi|297833518|ref|XP_002884641.1| hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata] gi|297330481|gb|EFH60900.1| hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 250 | ||||||
| TAIR|locus:2079626 | 368 | AT3G07310 "AT3G07310" [Arabido | 0.448 | 0.304 | 0.741 | 1.2e-69 | |
| TAIR|locus:2152516 | 344 | AT5G48590 "AT5G48590" [Arabido | 0.444 | 0.322 | 0.732 | 9.9e-64 | |
| TAIR|locus:2088490 | 427 | AT3G17800 "AT3G17800" [Arabido | 0.948 | 0.555 | 0.4 | 4.2e-40 | |
| TAIR|locus:2198055 | 423 | AT1G48450 "AT1G48450" [Arabido | 0.952 | 0.562 | 0.403 | 5.3e-40 | |
| TAIR|locus:2031760 | 406 | AT1G32160 "AT1G32160" [Arabido | 0.956 | 0.588 | 0.350 | 8.5e-33 |
| TAIR|locus:2079626 AT3G07310 "AT3G07310" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 437 (158.9 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 83/112 (74%), Positives = 95/112 (84%)
Query: 1 MYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIG 60
MYMLI YK+SEIRV LVPKLSRCIYNGRLEIWPSKDWELESI+ + LE+I+EH+S VIG
Sbjct: 137 MYMLIFYKYSEIRVPLVPKLSRCIYNGRLEIWPSKDWELESIYSCDTLEIIKEHVSAVIG 196
Query: 61 LRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAH 112
LR N VTD+WATT+IQ+L L +VY ASILYGYFLKSASLR+ LE L+ H
Sbjct: 197 LRVNSCVTDNWATTQIQKLHLRKVYAASILYGYFLKSASLRHQLECSLSDIH 248
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| TAIR|locus:2152516 AT5G48590 "AT5G48590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2088490 AT3G17800 "AT3G17800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2198055 AT1G48450 "AT1G48450" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2031760 AT1G32160 "AT1G32160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00002530 | hypothetical protein (275 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 250 | |||
| pfam05542 | 85 | pfam05542, DUF760, Protein of unknown function (DU | 6e-15 |
| >gnl|CDD|203271 pfam05542, DUF760, Protein of unknown function (DUF760) | Back alignment and domain information |
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Score = 67.6 bits (166), Expect = 6e-15
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 38 ELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKS 97
L EVLE +R ++S ++G T + R L ++ +S++ GYFL++
Sbjct: 17 RLADSASPEVLEAMRRNVSGLLGSL---PSDHFEVTIQTSRENLAQLLASSMMTGYFLRN 73
Query: 98 ASLRYYLEECL 108
A R LE L
Sbjct: 74 AEQRLELERSL 84
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This family contains several uncharacterized plant proteins. Length = 85 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 250 | |||
| PF05542 | 86 | DUF760: Protein of unknown function (DUF760); Inte | 99.92 | |
| PF05542 | 86 | DUF760: Protein of unknown function (DUF760); Inte | 97.86 |
| >PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins | Back alignment and domain information |
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Probab=99.92 E-value=2e-25 Score=172.41 Aligned_cols=72 Identities=29% Similarity=0.419 Sum_probs=67.1
Q ss_pred cchhhcccCcHHHHHHHHHHHHHhhccc-cCCCCCCCcceEEechhhhhhHHHHHhhhhHhhhhhhhHhHHHHHHh
Q 025579 35 KDWELESIHEFEVLEMIREHISTVIGLR-ANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLA 109 (250)
Q Consensus 35 ~~~~Le~~hS~Ev~emI~~hl~~vLG~~-~~~~~~~~~~~~~isr~~Lg~lyAAsmM~GYFLr~~eqR~~LE~sl~ 109 (250)
.-..++++|||||+|+|++||.++||++ |++.++ ++++++|++||||||++||+|||||++|+|++||++|+
T Consensus 14 ~~~~l~~~~s~ev~e~m~~~v~~llG~l~p~~~~~---~~i~~s~~~La~L~~~~mm~GYfLr~~E~R~~Le~sL~ 86 (86)
T PF05542_consen 14 RIQQLSEPASPEVLEAMKQHVSGLLGNLSPSDQFN---VTIQTSRENLAQLLAWSMMTGYFLRNAEQRLELERSLK 86 (86)
T ss_pred HHHHhhccCCHHHHHHHHHHHHHHHcCCCCcccCc---ceeEECHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence 3467999999999999999999999999 877655 89999999999999999999999999999999999985
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| >PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00