BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025583
(250 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449485688|ref|XP_004157245.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 322
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 176/228 (77%), Positives = 185/228 (81%), Gaps = 14/228 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPPRPPGYAF+EFED RDAEDAI GRDGY FDG RLRVE AHGGR HSSS
Sbjct: 30 YGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAIYGRDGYKFDGCRLRVEFAHGGRGHSSS 89
Query: 63 MDRYSSYSSGGSRG-VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
+DRYS SG SRG V RR+DYRVLVTGLPSSASWQDLKDHMRRAGDVCFS+VFRDRGGM
Sbjct: 90 VDRYSR--SGSSRGGVPRRTDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGM 147
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP---SRSPYYSRS 178
GIVDYT+YDDMKYAIRKLD SEFRNAFSR+YVRV+EYDSR SYSRSP SR YSRS
Sbjct: 148 AGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYVRVKEYDSRHSYSRSPSLDSRRSDYSRS 207
Query: 179 RSRSPYYSRSRSPSRSWSYSPRSR--------SYSPRGKYSRRSPSLS 218
SRSPY R RS SRS S S S SPR K+SRRS S+S
Sbjct: 208 PSRSPYRGRGRSQSRSRSRSRSRSRSYSGRSTSLSPRHKHSRRSRSVS 255
>gi|255542756|ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548402|gb|EEF49893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 300
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 185/239 (77%), Positives = 194/239 (81%), Gaps = 9/239 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIV++DLKIPPRPPGYAF+EFED RDAEDAIRGRDGYNFDG RLRVELAHGGRRHSS
Sbjct: 67 YGPIVEVDLKIPPRPPGYAFVEFEDARDAEDAIRGRDGYNFDGCRLRVELAHGGRRHSSP 126
Query: 63 MDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
DRYSSYS SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM
Sbjct: 127 GDRYSSYSGRSGSRGPSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 186
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 181
TGIVDYT+YDDMK+AI+KLD SEFRNAFSRSYVRVREYDSRRSYSRSPS PY RSR
Sbjct: 187 TGIVDYTNYDDMKHAIKKLDDSEFRNAFSRSYVRVREYDSRRSYSRSPSCGPY---DRSR 243
Query: 182 SPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSPPRSFSRSG 240
S SR+RS W SRS SP KY RS S+SP RS S RS +GS PRS S G
Sbjct: 244 SRSRSRTRSRHSDW-----SRSKSPGAKYHSRSLSVSPGRSVSPRSHAGSSPRSSSNLG 297
>gi|357441751|ref|XP_003591153.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480201|gb|AES61404.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 290
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/217 (77%), Positives = 183/217 (84%), Gaps = 3/217 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPP+PPGYAF+EFED RDA+DAI RDGY+FDGYRL VELAHGGR SSS
Sbjct: 61 YGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAHGGRGSSSS 120
Query: 63 MDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
+DRYS +S GSRGVSRRSDYRVLVTGLP SASWQDLKDHMR+AG VCFSQVFR+RGG+
Sbjct: 121 VDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGL 180
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 181
TGIVDYT+YDD+KYAIRKLD SEFRNAFSRSY+RVREYD S S S S SRSR
Sbjct: 181 TGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRR--SYSRSR 238
Query: 182 SPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLS 218
SPY SRSRS S S SYS RSRS SP+ K+SRRS SLS
Sbjct: 239 SPYVSRSRSCSLSHSYSGRSRSLSPKAKHSRRSFSLS 275
>gi|388515137|gb|AFK45630.1| unknown [Medicago truncatula]
Length = 259
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/217 (77%), Positives = 183/217 (84%), Gaps = 3/217 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPP+PPGYAF+EFED RDA+DAI RDGY+FDGYRL VELAHGGR SSS
Sbjct: 30 YGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAHGGRGSSSS 89
Query: 63 MDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
+DRYS +S GSRGVSRRSDYRVLVTGLP SASWQDLKDHMR+AG VCFSQVFR+RGG+
Sbjct: 90 VDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGL 149
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 181
TGIVDYT+YDD+KYAIRKLD SEFRNAFSRSY+RVREYD S S S S SRSR
Sbjct: 150 TGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRR--SYSRSR 207
Query: 182 SPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLS 218
SPY SRSRS S S SYS RSRS SP+ K+SRRS SLS
Sbjct: 208 SPYVSRSRSCSLSHSYSGRSRSLSPKAKHSRRSFSLS 244
>gi|449435631|ref|XP_004135598.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 315
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/227 (74%), Positives = 179/227 (78%), Gaps = 19/227 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPPRPPGYAF+EFED RDAEDAI GRDGY FDG RLRVE AHGGR HSSS
Sbjct: 30 YGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAIYGRDGYKFDGCRLRVEFAHGGRGHSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+DRYS SG SR D+ VLVTGLPSSASWQDLKDHMRRAGDVCFS+VFRDRGGM
Sbjct: 90 VDRYSR--SGSSR------DFAVLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGMA 141
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP---SRSPYYSRSR 179
GIVDYT+YDDMKYAIRKLD SEFRNAFSR+YVRV+EYDSR SYSRSP SR YSRS
Sbjct: 142 GIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYVRVKEYDSRHSYSRSPSLDSRRSDYSRSP 201
Query: 180 SRSPYYSRSRSPSRSWSYSPRSR--------SYSPRGKYSRRSPSLS 218
SRSPY R RS SRS S S S SPR K+SRRS S+S
Sbjct: 202 SRSPYRGRGRSQSRSRSRSRSRSRSYSGRSTSLSPRHKHSRRSRSVS 248
>gi|217073712|gb|ACJ85216.1| unknown [Medicago truncatula]
Length = 246
Score = 283 bits (724), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 166/213 (77%), Positives = 180/213 (84%), Gaps = 3/213 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPP+PPGYAF+EFED RDA+DAI RDGY+FDGYRL VELAHGGR SSS
Sbjct: 30 YGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAHGGRGSSSS 89
Query: 63 MDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
+DRYS +S GSRGVSRRSDYRVLVTGLP SASWQDLKDHMR+AG VCFSQVFR+RGG+
Sbjct: 90 VDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGL 149
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 181
TGIVDYT+YDD+KYAIRKLD SEFRNAFSRSY+RVREYD S S S S SRSR
Sbjct: 150 TGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRR--SYSRSR 207
Query: 182 SPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRS 214
SPY SRSRS S S SYS RSRS SP+ K+SRRS
Sbjct: 208 SPYVSRSRSCSLSHSYSGRSRSLSPKAKHSRRS 240
>gi|148909953|gb|ABR18062.1| unknown [Picea sitchensis]
Length = 331
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 137/159 (86%), Positives = 144/159 (90%), Gaps = 2/159 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPPRPPGY F+EFED RDAEDAIRGRDGYNFDG RLRVELAHGGR SS+
Sbjct: 30 YGPIVDIDLKIPPRPPGYCFIEFEDARDAEDAIRGRDGYNFDGNRLRVELAHGGRGQSST 89
Query: 63 MDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
DRYSSYSS G R GVSRRS+YRVLV+GLPSSASWQDLKDHMRRAGDVCFSQVFRD G
Sbjct: 90 NDRYSSYSSAGGRSGGVSRRSEYRVLVSGLPSSASWQDLKDHMRRAGDVCFSQVFRDSSG 149
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 159
TGIVDYT+YDDMKYAIRKLD SEFRNAFSR Y+RV+EY
Sbjct: 150 TTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGYIRVKEY 188
>gi|357441755|ref|XP_003591155.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480203|gb|AES61406.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 316
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 158/204 (77%), Positives = 172/204 (84%), Gaps = 3/204 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPP+PPGYAF+EFED RDA+DAI RDGY+FDGYRL VELAHGGR SSS
Sbjct: 61 YGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAHGGRGSSSS 120
Query: 63 MDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
+DRYS +S GSRGVSRRSDYRVLVTGLP SASWQDLKDHMR+AG VCFSQVFR+RGG+
Sbjct: 121 VDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGL 180
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 181
TGIVDYT+YDD+KYAIRKLD SEFRNAFSRSY+RVREYD S S S S SRSR
Sbjct: 181 TGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRR--SYSRSR 238
Query: 182 SPYYSRSRSPSRSWSYSPRSRSYS 205
SPY SRSRS S S SYS RSR ++
Sbjct: 239 SPYVSRSRSCSLSHSYSGRSRRFT 262
>gi|357441749|ref|XP_003591152.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480200|gb|AES61403.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 334
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 158/204 (77%), Positives = 172/204 (84%), Gaps = 3/204 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPP+PPGYAF+EFED RDA+DAI RDGY+FDGYRL VELAHGGR SSS
Sbjct: 61 YGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAHGGRGSSSS 120
Query: 63 MDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
+DRYS +S GSRGVSRRSDYRVLVTGLP SASWQDLKDHMR+AG VCFSQVFR+RGG+
Sbjct: 121 VDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGL 180
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 181
TGIVDYT+YDD+KYAIRKLD SEFRNAFSRSY+RVREYD S S S S SRSR
Sbjct: 181 TGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRR--SYSRSR 238
Query: 182 SPYYSRSRSPSRSWSYSPRSRSYS 205
SPY SRSRS S S SYS RSR ++
Sbjct: 239 SPYVSRSRSCSLSHSYSGRSRRFT 262
>gi|357441753|ref|XP_003591154.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480202|gb|AES61405.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 322
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 158/204 (77%), Positives = 172/204 (84%), Gaps = 3/204 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPP+PPGYAF+EFED RDA+DAI RDGY+FDGYRL VELAHGGR SSS
Sbjct: 61 YGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAHGGRGSSSS 120
Query: 63 MDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
+DRYS +S GSRGVSRRSDYRVLVTGLP SASWQDLKDHMR+AG VCFSQVFR+RGG+
Sbjct: 121 VDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGL 180
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 181
TGIVDYT+YDD+KYAIRKLD SEFRNAFSRSY+RVREYD S S S S SRSR
Sbjct: 181 TGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRR--SYSRSR 238
Query: 182 SPYYSRSRSPSRSWSYSPRSRSYS 205
SPY SRSRS S S SYS RSR ++
Sbjct: 239 SPYVSRSRSCSLSHSYSGRSRRFT 262
>gi|357516357|ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 347
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 160/222 (72%), Positives = 179/222 (80%), Gaps = 3/222 (1%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
M YG I IDLK+PPRPPGYAF+EFED +DAEDAIRGRDGY+FDG+RLRVE AHGGR +S
Sbjct: 54 MKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAHGGRGNS 113
Query: 61 SSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
SS DRYSS+S+G R +YRV+V GLPSSASWQDLKDHMR+AGDVCFSQVF D
Sbjct: 114 SSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGR 173
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+SYVRVREYDSRR SRSP R P +SR R
Sbjct: 174 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRD-SRSPGRGPSHSRGR 232
Query: 180 SRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 221
S S SRSRS SRS SRS SP+GK S+RSP+ SPA+
Sbjct: 233 SYSRSRSRSRSHSRS-YSPGHSRSKSPKGKSSQRSPAKSPAK 273
>gi|357511267|ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 401
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 160/222 (72%), Positives = 179/222 (80%), Gaps = 3/222 (1%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
M YG I IDLK+PPRPPGYAF+EFED +DAEDAIRGRDGY+FDG+RLRVE AHGGR +S
Sbjct: 129 MKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAHGGRGNS 188
Query: 61 SSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
SS DRYSS+S+G R +YRV+V GLPSSASWQDLKDHMR+AGDVCFSQVF D
Sbjct: 189 SSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGR 248
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+SYVRVREYDSRR SRSP R P +SR R
Sbjct: 249 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRD-SRSPGRGPSHSRGR 307
Query: 180 SRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 221
S S SRSRS SRS SRS SP+GK S+RSP+ SPA+
Sbjct: 308 SYSRSRSRSRSHSRS-YSPGHSRSKSPKGKSSQRSPAKSPAK 348
>gi|357516353|ref|XP_003628465.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522487|gb|AET02941.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 326
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 152/222 (68%), Positives = 171/222 (77%), Gaps = 3/222 (1%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
M YG I IDLK+PPRPPGYAF+EFED +DAEDAIRGRDGY+FDG+RLRVE AHGGR +S
Sbjct: 54 MKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAHGGRGNS 113
Query: 61 SSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
SS DRYSS+S+G R +YRV+V GLPSSASWQDLKDHMR+AGDVCFSQVF D
Sbjct: 114 SSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGR 173
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+SYVRVREYDSRR SRSP R P +SR R
Sbjct: 174 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRD-SRSPGRGPSHSRGR 232
Query: 180 SRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 221
S S SRS SP+GK S+RSP+ SPA+
Sbjct: 233 SYS-RSRSRSRSHSRSYSPGHSRSKSPKGKSSQRSPAKSPAK 273
>gi|357516359|ref|XP_003628468.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522490|gb|AET02944.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 273
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 152/222 (68%), Positives = 171/222 (77%), Gaps = 3/222 (1%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
M YG I IDLK+PPRPPGYAF+EFED +DAEDAIRGRDGY+FDG+RLRVE AHGGR +S
Sbjct: 1 MKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAHGGRGNS 60
Query: 61 SSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
SS DRYSS+S+G R +YRV+V GLPSSASWQDLKDHMR+AGDVCFSQVF D
Sbjct: 61 SSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGR 120
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+SYVRVREYDSRR SRSP R P +SR R
Sbjct: 121 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRD-SRSPGRGPSHSRGR 179
Query: 180 SRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 221
S S SRS SP+GK S+RSP+ SPA+
Sbjct: 180 SYS-RSRSRSRSHSRSYSPGHSRSKSPKGKSSQRSPAKSPAK 220
>gi|357516355|ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 329
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/222 (72%), Positives = 179/222 (80%), Gaps = 3/222 (1%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
M YG I IDLK+PPRPPGYAF+EFED +DAEDAIRGRDGY+FDG+RLRVE AHGGR +S
Sbjct: 54 MKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAHGGRGNS 113
Query: 61 SSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
SS DRYSS+S+G R +YRV+V GLPSSASWQDLKDHMR+AGDVCFSQVF D
Sbjct: 114 SSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGR 173
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+SYVRVREYDSRR SRSP R P +SR R
Sbjct: 174 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRD-SRSPGRGPSHSRGR 232
Query: 180 SRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 221
S S SRSRS SRS SRS SP+GK S+RSP+ SPA+
Sbjct: 233 SYSRSRSRSRSHSRS-YSPGHSRSKSPKGKSSQRSPAKSPAK 273
>gi|224123080|ref|XP_002318990.1| predicted protein [Populus trichocarpa]
gi|222857366|gb|EEE94913.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/157 (87%), Positives = 146/157 (92%), Gaps = 1/157 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPPRPPGYAF+EFE+ RDAEDAIRGRDGYNFDG RLRVELAHGGRRHSS
Sbjct: 29 YGPIVDIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYNFDGCRLRVELAHGGRRHSSP 88
Query: 63 MDRYSSYSSGGS-RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
+D YSSYS RG S+RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM
Sbjct: 89 VDHYSSYSGSSGSRGPSKRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 148
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 158
TGIVDYT+YDDMKYAI+KLD SEFRNAFSR+Y+RVRE
Sbjct: 149 TGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYIRVRE 185
>gi|218188085|gb|EEC70512.1| hypothetical protein OsI_01613 [Oryza sativa Indica Group]
Length = 447
Score = 262 bits (670), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 144/207 (69%), Positives = 157/207 (75%), Gaps = 20/207 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLKIPPRPPGYAF+EFED RDA+DAI GRD YNFDGYRLRVELAHGGR S S
Sbjct: 219 YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAICGRDRYNFDGYRLRVELAHGGRGQSYS 278
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SYSSG GVSRRS+YRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 279 YDRPRSYSSGRRGGVSRRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATV 338
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSR-------------------- 162
GIVDYT+Y+DMKYAIRKLD SEFRNAFSR+Y+RVREYD R
Sbjct: 339 GIVDYTTYEDMKYAIRKLDDSEFRNAFSRAYIRVREYDDRSRSRSRSYSRSRSYSRSRSP 398
Query: 163 RSYSRSPSRSPYYSRSRSRSPYYSRSR 189
+S SRSPS S SRSR+P S SR
Sbjct: 399 KSVSRSPSPVDERSISRSRTPVSSPSR 425
>gi|357511859|ref|XP_003626218.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501233|gb|AES82436.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 296
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/168 (83%), Positives = 155/168 (92%), Gaps = 2/168 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+GPIVDI+LKIPPRPPGYAF+EFED RDAEDAIR RDGY FDG+RLRVELAHGGR +SSS
Sbjct: 30 FGPIVDIELKIPPRPPGYAFVEFEDARDAEDAIRYRDGYKFDGFRLRVELAHGGRGYSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+DRYSS S GSRGVS+ S+YRVLVTGLP SASWQDLKDHMRRAGDVCFSQVFRDRGGMT
Sbjct: 90 VDRYSS-YSSGSRGVSKHSEYRVLVTGLPPSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPS 170
GIV+YT+Y+DMKYAIRKLD SEFRNAFS +Y+RVREYD RR Y+RSPS
Sbjct: 149 GIVEYTNYEDMKYAIRKLDDSEFRNAFSWAYIRVREYD-RRRYTRSPS 195
>gi|255646543|gb|ACU23746.1| unknown [Glycine max]
Length = 310
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/230 (66%), Positives = 176/230 (76%), Gaps = 6/230 (2%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
+ YG I IDLK+PPRPPGYAF+EFED +DAEDAIRGRDGY+FDG+RLRVE AHGGR HS
Sbjct: 28 LKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGGRGHS 87
Query: 61 SSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
SS DR++S+S+G R +YRVLVTGLPSSASWQDLKDHMR+AGDVCFSQVF D
Sbjct: 88 SSKDRHNSHSNGRGGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGR 147
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+ YVRVREYDSRR SRSPS P +SR R
Sbjct: 148 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGYVRVREYDSRRDSSRSPSHGPSHSRGR 207
Query: 180 SRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSPS 229
S RS+S SP+GK S+RSP+ SP +SQRSP+
Sbjct: 208 S-----YSRSRSRSHSYSRDRSQSKSPKGKSSQRSPAKSPKGKSSQRSPA 252
>gi|449436495|ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 309
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/168 (79%), Positives = 143/168 (85%), Gaps = 1/168 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I IDLK+PPRPPGYAF+EFED DA+DAIRGRDGY+FDG+RLRVELAHGGR HSSS
Sbjct: 30 YGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
DRYSS+ R DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD G
Sbjct: 90 NDRYSSHGGSRGGRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGT 149
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 169
TGIVDYT+YDDMKYAI+KLD SEFRNAFSR+YVRVREYDS+R SRSP
Sbjct: 150 TGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYVRVREYDSKRDLSRSP 197
>gi|356572736|ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 309
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/230 (66%), Positives = 176/230 (76%), Gaps = 6/230 (2%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
+ YG I IDLK+PPRPPGYAF+EFED +DAEDAIRGRDGY+FDG+RLRVE AHGGR HS
Sbjct: 28 LKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGGRGHS 87
Query: 61 SSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
SS DR++S+S+G R +YRVLVTGLPSSASWQDLKDHMR+AGDVCFSQVF D
Sbjct: 88 SSKDRHNSHSNGRGGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGR 147
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+ YVRVREYDSRR SRSPS P +SR R
Sbjct: 148 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGYVRVREYDSRRDSSRSPSHGPSHSRGR 207
Query: 180 SRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSPS 229
S RS+S SP+GK S+RSP+ SP +SQRSP+
Sbjct: 208 S-----YSRSRSRSHSYSRDRSQSKSPKGKSSQRSPAKSPKGKSSQRSPA 252
>gi|357131986|ref|XP_003567614.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 262
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/159 (81%), Positives = 140/159 (88%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLKIPPRPPGYAF+EFED RDA+DAI GRDGYNFDGYRLRVELAHGGR S
Sbjct: 30 YGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGGRGQSYQ 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+R SYSSG GVSRRS+YRVLV GLPSSASWQDLKDHMRRAGDVCFS V+R+ G +
Sbjct: 90 YERPRSYSSGRRGGVSRRSEYRVLVDGLPSSASWQDLKDHMRRAGDVCFSDVYREAGAIV 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GIVDYT+YDDMKYAIRKLD +EFRNAFSRSY+RVREYD+
Sbjct: 150 GIVDYTNYDDMKYAIRKLDGTEFRNAFSRSYIRVREYDA 188
>gi|302791860|ref|XP_002977696.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
gi|300154399|gb|EFJ21034.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
Length = 298
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 128/157 (81%), Positives = 141/157 (89%), Gaps = 4/157 (2%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLK+PPRPPGY F+EFED RDAEDAIRGRDGYNFDGYRLRVE+AHGGR SS
Sbjct: 29 YGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIRGRDGYNFDGYRLRVEIAHGGRGPPSS 88
Query: 63 MDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
DRYSSY GGS VSRRS+YRV++TGLPSSASWQDLKDHMRRAGDVCF+QVFR+ G
Sbjct: 89 -DRYSSYGGRGGS--VSRRSEYRVIITGLPSSASWQDLKDHMRRAGDVCFAQVFREGNGT 145
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 158
TGIVD+T+YDDMKYAI+KLD SEFRN FSRSY+RV+E
Sbjct: 146 TGIVDFTNYDDMKYAIKKLDDSEFRNPFSRSYIRVKE 182
>gi|326495758|dbj|BAJ85975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/159 (79%), Positives = 141/159 (88%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLKIPPRPPGYAF+EFED RDA+DAI GRDGY+FDGYRLRVELAHGG+ S S
Sbjct: 30 YGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGYRLRVELAHGGKAQSYS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SS+SSG GVSRRS+YRV+V GLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 90 YDRPSSFSSGRRGGVSRRSEYRVMVDGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATV 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GIVDYT+YDDMKYAIRKLD +EFRNAFSR+Y+RVREYD+
Sbjct: 150 GIVDYTNYDDMKYAIRKLDGTEFRNAFSRAYIRVREYDA 188
>gi|302795628|ref|XP_002979577.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
gi|300152825|gb|EFJ19466.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
Length = 236
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/157 (81%), Positives = 141/157 (89%), Gaps = 4/157 (2%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLK+PPRPPGY F+EFED RDAEDAIRGRDGYNFDGYRLRVE+AHGGR SS
Sbjct: 27 YGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIRGRDGYNFDGYRLRVEIAHGGRGPPSS 86
Query: 63 MDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
DRYSSY GGS VSRRS+YRV++TGLPSSASWQDLKDHMRRAGDVCF+QVFR+ G
Sbjct: 87 -DRYSSYGGRGGS--VSRRSEYRVIITGLPSSASWQDLKDHMRRAGDVCFAQVFREGNGT 143
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 158
TGIVD+T+YDDMKYAI+KLD SEFRN FSRSY+RV+E
Sbjct: 144 TGIVDFTNYDDMKYAIKKLDDSEFRNPFSRSYIRVKE 180
>gi|224068334|ref|XP_002302710.1| predicted protein [Populus trichocarpa]
gi|222844436|gb|EEE81983.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 151/178 (84%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+ IDLKIPPRPPGYAF+EFE+ RDAEDAIRGRDGY+FDG+RLRVELAHGGR HSSS
Sbjct: 30 YGPVAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGHSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
S G G SRRS+YRV+VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD G T
Sbjct: 90 DRHSSYSGGRGRGGASRRSEYRVVVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTT 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRS 180
GIVDYT+Y+DMKYAI+K+D SEFRNAFS++YVRVREYDS+R SRSP R +SR R+
Sbjct: 150 GIVDYTNYEDMKYAIKKIDDSEFRNAFSQAYVRVREYDSKRDSSRSPGRDRSHSRGRN 207
>gi|147855944|emb|CAN80749.1| hypothetical protein VITISV_040486 [Vitis vinifera]
Length = 282
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/158 (84%), Positives = 143/158 (90%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPPRPPGYAF+EFED RDAEDAI GRDGYNFDG+RLRVELAHGGR SSS
Sbjct: 30 YGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGYNFDGHRLRVELAHGGRGQSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+D YSSYSS G+SR S+YRVLVTGLP SASWQDLKDHMRRAGDVCFSQVFR RGGMT
Sbjct: 90 VDHYSSYSSSSRGGLSRHSEYRVLVTGLPYSASWQDLKDHMRRAGDVCFSQVFRGRGGMT 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
GIVDYT+YDDMKYAIRKLD S F+N FSR+Y+RVREY+
Sbjct: 150 GIVDYTNYDDMKYAIRKLDDSLFKNQFSRAYIRVREYE 187
>gi|224123814|ref|XP_002330215.1| predicted protein [Populus trichocarpa]
gi|222871671|gb|EEF08802.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/159 (83%), Positives = 141/159 (88%), Gaps = 1/159 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPPRPPGYAF+EFED DA+ AIRG DGYNFD RLRVELAHGGRRHSS
Sbjct: 29 YGPIVDIDLKIPPRPPGYAFVEFEDAHDAKYAIRGLDGYNFDACRLRVELAHGGRRHSSP 88
Query: 63 MDRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
+DRYSSYS + SDYRVLV+GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM
Sbjct: 89 VDRYSSYSGSSGSRGPPKHSDYRVLVSGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 148
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
TGIVDYT+YDDMKYAI+KLD SEFRNAFSR+Y+RVREYD
Sbjct: 149 TGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYIRVREYD 187
>gi|296089689|emb|CBI39508.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 133/158 (84%), Positives = 143/158 (90%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPPRPPGYAF+EFED RDAEDAI GRDGYNFDG+RLRVELAHGGR SSS
Sbjct: 30 YGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGYNFDGHRLRVELAHGGRGQSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+D YSSYSS G+SR S+YRVLVTGLP SASWQDLKDHMRRAGDVCFSQVFR RGGMT
Sbjct: 90 VDHYSSYSSSSRGGLSRHSEYRVLVTGLPYSASWQDLKDHMRRAGDVCFSQVFRGRGGMT 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
GIVDYT+YDDMKYAIRKLD S F+N FSR+Y+RVREY+
Sbjct: 150 GIVDYTNYDDMKYAIRKLDDSLFKNQFSRAYIRVREYE 187
>gi|356574963|ref|XP_003555612.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 264
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/159 (83%), Positives = 144/159 (90%), Gaps = 1/159 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPPRPPGYAF+EFED RDAEDAI+ RDGYNFDG+RLRVELAHGGR +SSS
Sbjct: 30 YGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIQYRDGYNFDGFRLRVELAHGGRGYSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
+DRYSSYS G R DYRVLVTGLP SASWQDLKDHMR+AGDVCFSQVFR+RGGM
Sbjct: 90 VDRYSSYSGGSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGM 149
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
TGIVDYT+YDDMKYAIRKLD SEFRNAFSR+++RVREYD
Sbjct: 150 TGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAFIRVREYD 188
>gi|225450797|ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera]
Length = 288
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/158 (84%), Positives = 143/158 (90%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPPRPPGYAF+EFED RDAEDAI GRDGYNFDG+RLRVELAHGGR SSS
Sbjct: 30 YGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGYNFDGHRLRVELAHGGRGQSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+D YSSYSS G+SR S+YRVLVTGLP SASWQDLKDHMRRAGDVCFSQVFR RGGMT
Sbjct: 90 VDHYSSYSSSSRGGLSRHSEYRVLVTGLPYSASWQDLKDHMRRAGDVCFSQVFRGRGGMT 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
GIVDYT+YDDMKYAIRKLD S F+N FSR+Y+RVREY+
Sbjct: 150 GIVDYTNYDDMKYAIRKLDDSLFKNQFSRAYIRVREYE 187
>gi|255542752|ref|XP_002512439.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548400|gb|EEF49891.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 444
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 167/277 (60%), Positives = 195/277 (70%), Gaps = 31/277 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IV +DL+ PPR PGYAF++FED +AE+AIRGRDGYNF+G RLRVELA+GGR+HS+
Sbjct: 30 YGLIVRVDLRNPPRTPGYAFVQFEDACNAEEAIRGRDGYNFNGCRLRVELAYGGRKHSTP 89
Query: 63 MD---------RYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
R+ + SG S G S+ SD+RVLVTGLPSSASWQDLKDHMR+AGDVCF
Sbjct: 90 GHGGRKHSFPGRHYNTCSGISENHGPSKHSDHRVLVTGLPSSASWQDLKDHMRQAGDVCF 149
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSR 171
S+VF RGG TGIVDY +YDDMK+AI+KLD SEFRNAFSRSYVRVR+ DSRRSYS+SPS
Sbjct: 150 SRVFPGRGGKTGIVDYKNYDDMKHAIKKLDDSEFRNAFSRSYVRVRKDDSRRSYSQSPSH 209
Query: 172 -SPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSPSG 230
+ S+SRSRS S+SRS SRS + S RSRS SP KYS RS S+SP RS S S +G
Sbjct: 210 GTRDRSKSRSRSRSGSQSRSRSRSRNCSERSRSKSPGAKYSHRSLSVSPGRSVSPHSHAG 269
Query: 231 SPPRS----------------FSRSGSF---ARTWGV 248
PRS F R G A TWG+
Sbjct: 270 LSPRSSSPFIDGLDHYSGAHEFMRVGKIWLCAATWGL 306
>gi|147853033|emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
Length = 720
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/159 (81%), Positives = 141/159 (88%), Gaps = 1/159 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPI IDLKIPPRPPGYAF+EFE+ RDAEDAIRGRDGY+FDG+RLRVELAHGGR HSSS
Sbjct: 30 YGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAHGGRGHSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
+DR+S S G RG + R +YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF D GG
Sbjct: 90 IDRHSHSSGRGGRGGASRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFHDGGGT 149
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
GIVDYT+YDDMK+AIRKLD SEFRNAFSR+YVRV+EYD
Sbjct: 150 VGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRVKEYD 188
>gi|226504020|ref|NP_001150424.1| pre-mRNA-splicing factor SF2 [Zea mays]
gi|195639150|gb|ACG39043.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 263
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 147/199 (73%), Positives = 161/199 (80%), Gaps = 8/199 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLKIPPRPPGYAF+EFED RDA+DAI GRDGYNFDGYRLRVELAHGGR S S
Sbjct: 33 YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGGRGQSYS 92
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 93 YDRSSSYSSACRGGVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETI 152
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y+RVREYD+R S S SR+
Sbjct: 153 GIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYDARSRSRSR-------SHSYSRT 205
Query: 183 PYYSRSRSPSRSWSYSPRS 201
P YSRSRSP +S S SP S
Sbjct: 206 PSYSRSRSP-KSVSQSPSS 223
>gi|448878368|gb|AGE46147.1| arginine/serine-rich splicing factor SR30 transcript VI [Sorghum
bicolor]
Length = 237
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 151/207 (72%), Positives = 169/207 (81%), Gaps = 10/207 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IV+IDLKIPPRPPG+AF+EFED DAEDAI GRDGYNFDG+RLRVELAHGGR SS
Sbjct: 30 YGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGRDGYNFDGHRLRVELAHGGR-GPSS 88
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G
Sbjct: 89 FDRSSSYSSAGQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATI 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
GI DYT+Y+DMK+AIRKLD SEFRNAFSR+Y+RVREYD+RR SRS S+SP +RS SRS
Sbjct: 149 GIADYTNYEDMKHAIRKLDDSEFRNAFSRTYIRVREYDARR--SRSQSKSPVKARSPSRS 206
Query: 183 PYY------SRSRSPSRSWSYSPRSRS 203
P S SRSP+RS S PRS S
Sbjct: 207 PPVSPPRDKSISRSPARSKSL-PRSCS 232
>gi|297849206|ref|XP_002892484.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
gi|297338326|gb|EFH68743.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
Length = 265
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 136/168 (80%), Positives = 153/168 (91%), Gaps = 2/168 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPPRPPGYAF+EFED RDA+DAI GRDGY+FDG RLRVE+AHGGRR SSS
Sbjct: 30 YGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGCRLRVEIAHGGRRGSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+DRYSS +G SR SRRS YRVLVTGLP SASWQDLKDHMR+AGDVCFS+VFRDRG M+
Sbjct: 90 VDRYSSSYTG-SRAPSRRSAYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFRDRGRMS 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPS 170
G+VDY++YDDMKYAIRKLD +EFRNAFSR+Y+RVREY+S RS SRSP+
Sbjct: 149 GVVDYSNYDDMKYAIRKLDDTEFRNAFSRAYIRVREYES-RSVSRSPN 195
>gi|225437350|ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359480272|ref|XP_003632425.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
Length = 296
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/159 (81%), Positives = 141/159 (88%), Gaps = 1/159 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPI IDLKIPPRPPGYAF+EFE+ RDAEDAIRGRDGY+FDG+RLRVELAHGGR HSSS
Sbjct: 30 YGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAHGGRGHSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
+DR+S S G RG + R +YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF D GG
Sbjct: 90 IDRHSHSSGRGGRGGASRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFHDGGGT 149
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
GIVDYT+YDDMK+AIRKLD SEFRNAFSR+YVRV+EYD
Sbjct: 150 VGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRVKEYD 188
>gi|42561847|ref|NP_172386.3| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775270|emb|CAB42557.1| SF2/ASF-like splicing modulator Srp30 [Arabidopsis thaliana]
gi|23297699|gb|AAN13011.1| putative SF2/ASF splicing modulator Srp30 [Arabidopsis thaliana]
gi|332190279|gb|AEE28400.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 268
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/167 (79%), Positives = 147/167 (88%), Gaps = 2/167 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPPRPPGYAF+EFED RDA+DAI GRDGY+FDG RLRVE+AHGGRR S S
Sbjct: 30 YGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGCRLRVEIAHGGRRFSPS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+DRYSS S SRRSDYRVLVTGLP SASWQDLKDHMR+AGDVCFS+VF DR GM+
Sbjct: 90 VDRYSSSYSASRAP-SRRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMS 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 169
G+VDY++YDDMKYAIRKLD +EFRNAFS +Y+RVREY+S RS SRSP
Sbjct: 149 GVVDYSNYDDMKYAIRKLDATEFRNAFSSAYIRVREYES-RSVSRSP 194
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/158 (77%), Positives = 139/158 (87%), Gaps = 2/158 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLKIPPRPPG+AF+EFED RDAEDAIRGRDGYNFDG RLRVELAHGGR +SSS
Sbjct: 96 YGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAHGGRGNSSS 155
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+ +S G GVSR ++YRVLVTGLPSSASWQDLKDHMR AGDVC+S+V+R+ GG
Sbjct: 156 FN--NSGGGGRRGGVSRHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTI 213
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
GIVDYT+YDDMKYAIRKLD SEF+NAFS++Y+RV+EYD
Sbjct: 214 GIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYD 251
>gi|3249109|gb|AAC24092.1| Contains similarity to pre-mRNA splicing factor (SF2), P33 subunit
gb|M72709 from Homo sapiens. ESTs gb|T42588 and
gb|R65514 come from this gene [Arabidopsis thaliana]
Length = 237
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/167 (79%), Positives = 147/167 (88%), Gaps = 2/167 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPPRPPGYAF+EFED RDA+DAI GRDGY+FDG RLRVE+AHGGRR S S
Sbjct: 30 YGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGCRLRVEIAHGGRRFSPS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+DRYSS S SRRSDYRVLVTGLP SASWQDLKDHMR+AGDVCFS+VF DR GM+
Sbjct: 90 VDRYSSSYSASRAP-SRRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMS 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 169
G+VDY++YDDMKYAIRKLD +EFRNAFS +Y+RVREY+S RS SRSP
Sbjct: 149 GVVDYSNYDDMKYAIRKLDATEFRNAFSSAYIRVREYES-RSVSRSP 194
>gi|222637670|gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/160 (76%), Positives = 140/160 (87%), Gaps = 2/160 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLKIPPRPPG+AF+EFED RDAEDAIRGRDGYNFDG RLRVELAHGGR +SSS
Sbjct: 96 YGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAHGGRGNSSS 155
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+ +S G GVSR ++YRVLVTGLPSSASWQDLKDHMR AGDVC+S+V+R+ GG
Sbjct: 156 FN--NSGGGGRRGGVSRHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTI 213
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSR 162
GIVDYT+YDDMKYAIRKLD SEF+NAFS++Y+RV+EYD +
Sbjct: 214 GIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYDGK 253
>gi|79582138|ref|NP_683288.2| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775271|emb|CAB42558.1| SF2/ASF-like splicing modulator Srp30, variant 1 [Arabidopsis
thaliana]
gi|332190280|gb|AEE28401.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 256
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/167 (79%), Positives = 147/167 (88%), Gaps = 2/167 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPPRPPGYAF+EFED RDA+DAI GRDGY+FDG RLRVE+AHGGRR S S
Sbjct: 30 YGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGCRLRVEIAHGGRRFSPS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+DRYSS S SRRSDYRVLVTGLP SASWQDLKDHMR+AGDVCFS+VF DR GM+
Sbjct: 90 VDRYSSSYSASRAP-SRRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMS 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 169
G+VDY++YDDMKYAIRKLD +EFRNAFS +Y+RVREY+S RS SRSP
Sbjct: 149 GVVDYSNYDDMKYAIRKLDATEFRNAFSSAYIRVREYES-RSVSRSP 194
>gi|52140014|gb|AAU29335.1| ASF/SF2-like pre-mRNA splicing factor SRP31'' [Zea mays]
gi|224035263|gb|ACN36707.1| unknown [Zea mays]
gi|413944990|gb|AFW77639.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 284
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/160 (80%), Positives = 143/160 (89%), Gaps = 1/160 (0%)
Query: 2 MYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
MYG IV+IDLKIPPRPPG+AF+EFED RDAEDAI GRDGYNFDG+RLRVELAHGGR +S
Sbjct: 37 MYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGRDGYNFDGHRLRVELAHGGR-GTS 95
Query: 62 SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
S DR SSYSS G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G
Sbjct: 96 SFDRSSSYSSAGQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGAT 155
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GI DYT+Y+DMK+AIRKLD SEFRNAFSR+YVRVREYD+
Sbjct: 156 IGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYVRVREYDA 195
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/158 (77%), Positives = 139/158 (87%), Gaps = 2/158 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLKIPPRPPG+AF+EFED RDAEDAIRGRDGYNFDG RLRVELAHGGR +SSS
Sbjct: 30 YGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAHGGRGNSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+ +S G GVSR ++YRVLVTGLPSSASWQDLKDHMR AGDVC+S+V+R+ GG
Sbjct: 90 FN--NSGGGGRRGGVSRHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTI 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
GIVDYT+YDDMKYAIRKLD SEF+NAFS++Y+RV+EYD
Sbjct: 148 GIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYD 185
>gi|168043399|ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674440|gb|EDQ60948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/154 (79%), Positives = 136/154 (88%), Gaps = 1/154 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLK+PPRPPGY FLEFED RDAEDAIRGRDGYNFDG RLRVE+AHGGR +
Sbjct: 30 YGRIVDIDLKLPPRPPGYCFLEFEDARDAEDAIRGRDGYNFDGNRLRVEIAHGGRGPPPA 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+DR ++ S G + GVSRRS+YRV+VTGLPSSASWQDLKDHMRRAGDVCF+QVFRD G M
Sbjct: 90 VDRSAAESGGRAGGVSRRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDAGTM- 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 156
GIVD+T+YDDMKYAIRKLD SEFRN FSRS++RV
Sbjct: 149 GIVDFTNYDDMKYAIRKLDDSEFRNPFSRSFIRV 182
>gi|148908052|gb|ABR17145.1| unknown [Picea sitchensis]
Length = 263
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/162 (74%), Positives = 137/162 (84%), Gaps = 5/162 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+D+DLK+PPRPPGY F+EFED RDAEDAIRGRDGYNFDG+R+RVE AHGGRR SSS
Sbjct: 30 YGRIIDVDLKVPPRPPGYCFIEFEDARDAEDAIRGRDGYNFDGHRIRVEFAHGGRRTSSS 89
Query: 63 MDRYSSYSSGGSRG-----VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
+ R SSYSS V+R +DYRVLVTGLPSSASWQDLKDHMRRAGDVC+++VFRD
Sbjct: 90 LGRPSSYSSIAGGRGGRGGVTRHTDYRVLVTGLPSSASWQDLKDHMRRAGDVCYAEVFRD 149
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 159
G G VDYT+ +DMKYAIRKLD SEFRNAFSRSY++V+EY
Sbjct: 150 SNGTRGTVDYTNLEDMKYAIRKLDDSEFRNAFSRSYIQVKEY 191
>gi|297743877|emb|CBI36847.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/159 (81%), Positives = 141/159 (88%), Gaps = 1/159 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPI IDLKIPPRPPGYAF+EFE+ RDAEDAIRGRDGY+FDG+RLRVELAHGGR HSSS
Sbjct: 30 YGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAHGGRGHSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
+DR+S S G RG + R +YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF D GG
Sbjct: 90 IDRHSHSSGRGGRGGASRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFHDGGGT 149
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
GIVDYT+YDDMK+AIRKLD SEFRNAFSR+YVRV+EYD
Sbjct: 150 VGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRVKEYD 188
>gi|414877278|tpg|DAA54409.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 254
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/159 (81%), Positives = 141/159 (88%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLKIPPRPPGYAF+EFED RDA+DAI GRDGYNFDGYRLRVELAHGGR S S
Sbjct: 33 YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGGRGQSYS 92
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 93 YDRSSSYSSACRGGVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETI 152
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 153 GIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYDA 191
>gi|414877279|tpg|DAA54410.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 272
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/159 (81%), Positives = 141/159 (88%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLKIPPRPPGYAF+EFED RDA+DAI GRDGYNFDGYRLRVELAHGGR S S
Sbjct: 33 YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGGRGQSYS 92
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 93 YDRSSSYSSACRGGVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETI 152
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 153 GIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYDA 191
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 246 bits (628), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/161 (77%), Positives = 141/161 (87%), Gaps = 2/161 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLKIPPRPPGYAF+EFED RDA+DAI GR+GY+FDG+RLRVELAHGGR S
Sbjct: 53 YGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRNGYDFDGHRLRVELAHGGR--GPS 110
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS G RG ++R+DYRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 111 FDRSSSYSSAGRRGAAKRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATI 170
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRR 163
GIVDYT+Y+DMK AIRKLD SEFRNAFSR+Y+RVREYDS +
Sbjct: 171 GIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYIRVREYDSAK 211
>gi|294461096|gb|ADE76115.1| unknown [Picea sitchensis]
Length = 298
Score = 246 bits (628), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 120/163 (73%), Positives = 138/163 (84%), Gaps = 4/163 (2%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+V IDLK PPRPPGY F+EFE+ RDAEDAIRGRDGY+ DG+RLRVELAHGGR + S
Sbjct: 30 YGPVVKIDLKFPPRPPGYCFIEFENARDAEDAIRGRDGYDIDGHRLRVELAHGGR-GALS 88
Query: 63 MDRYSSYSSGGSRGVSR---RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
+DRYSS+SSGG R R DYRV ++GLPSSASWQDLKDHMRRAGDV F+QVFRD
Sbjct: 89 VDRYSSFSSGGGRRNGRLQSHCDYRVTISGLPSSASWQDLKDHMRRAGDVTFAQVFRDSN 148
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSR 162
G TG+VDYT+YDDMKYAIRKLD +EF+N FSRSY+RV+EY S+
Sbjct: 149 GTTGVVDYTNYDDMKYAIRKLDDTEFKNPFSRSYIRVKEYGSK 191
>gi|194696448|gb|ACF82308.1| unknown [Zea mays]
gi|414877280|tpg|DAA54411.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 263
Score = 246 bits (627), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 129/159 (81%), Positives = 141/159 (88%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLKIPPRPPGYAF+EFED RDA+DAI GRDGYNFDGYRLRVELAHGGR S S
Sbjct: 33 YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGGRGQSYS 92
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 93 YDRSSSYSSACRGGVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETI 152
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 153 GIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYDA 191
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/158 (77%), Positives = 139/158 (87%), Gaps = 2/158 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLKIPPRPPG+AF+EFED RDAEDAIRGRDGYNFDG RLRVELAHGGR +SSS
Sbjct: 30 YGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAHGGRGNSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+ +S G GVSR ++YRVLVTGLPSSASWQDLKDHMR AGDVC+S+V+R+ GG
Sbjct: 90 FN--NSGGGGRRGGVSRHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTI 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
GIVDYT+YDDMKYAIRKLD SEF+NAFS++Y+RV+EYD
Sbjct: 148 GIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYD 185
>gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
gi|194698470|gb|ACF83319.1| unknown [Zea mays]
gi|413944987|gb|AFW77636.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 276
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/159 (79%), Positives = 142/159 (89%), Gaps = 1/159 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IV+IDLKIPPRPPG+AF+EFED RDAEDAI GRDGYNFDG+RLRVELAHGGR +SS
Sbjct: 30 YGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGRDGYNFDGHRLRVELAHGGR-GTSS 88
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G
Sbjct: 89 FDRSSSYSSAGQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATI 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GI DYT+Y+DMK+AIRKLD SEFRNAFSR+YVRVREYD+
Sbjct: 149 GIADYTNYEDMKHAIRKLDDSEFRNAFSRTYVRVREYDA 187
>gi|52140009|gb|AAU29331.1| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
gi|414877275|tpg|DAA54406.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 1 [Zea
mays]
gi|414877276|tpg|DAA54407.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 2 [Zea
mays]
Length = 260
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/159 (81%), Positives = 141/159 (88%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLKIPPRPPGYAF+EFED RDA+DAI GRDGYNFDGYRLRVELAHGGR S S
Sbjct: 30 YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGGRGQSYS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 90 YDRSSSYSSACRGGVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETI 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 150 GIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYDA 188
>gi|222631305|gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
Length = 305
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/159 (78%), Positives = 139/159 (87%), Gaps = 2/159 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLKIPPRPPGYAF+EFED RDA+DAI GR GY+FDG+RLRVELAHGGR S
Sbjct: 30 YGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGYDFDGHRLRVELAHGGR--GPS 87
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS G RG ++R+DYRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 88 FDRSSSYSSAGRRGAAKRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATI 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GIVDYT+Y+DMK AIRKLD SEFRNAFSR+Y+RVREYDS
Sbjct: 148 GIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYIRVREYDS 186
>gi|115463447|ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa Japonica Group]
Length = 294
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/159 (78%), Positives = 139/159 (87%), Gaps = 2/159 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLKIPPRPPGYAF+EFED RDA+DAI GR GY+FDG+RLRVELAHGGR S
Sbjct: 30 YGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGYDFDGHRLRVELAHGGR--GPS 87
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS G RG ++R+DYRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 88 FDRSSSYSSAGRRGAAKRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATI 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GIVDYT+Y+DMK AIRKLD SEFRNAFSR+Y+RVREYDS
Sbjct: 148 GIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYIRVREYDS 186
>gi|224032703|gb|ACN35427.1| unknown [Zea mays]
gi|414877277|tpg|DAA54408.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 234
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/159 (81%), Positives = 141/159 (88%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLKIPPRPPGYAF+EFED RDA+DAI GRDGYNFDGYRLRVELAHGGR S S
Sbjct: 30 YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGGRGQSYS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 90 YDRSSSYSSACRGGVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETI 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 150 GIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYDA 188
>gi|414877281|tpg|DAA54412.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 244
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/159 (81%), Positives = 141/159 (88%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLKIPPRPPGYAF+EFED RDA+DAI GRDGYNFDGYRLRVELAHGGR S S
Sbjct: 33 YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGGRGQSYS 92
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 93 YDRSSSYSSACRGGVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETI 152
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 153 GIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYDA 191
>gi|356505580|ref|XP_003521568.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Glycine max]
Length = 326
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/160 (76%), Positives = 137/160 (85%), Gaps = 1/160 (0%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
+ YG I IDLK+PPRPPGYAF+EFED +DAEDAIRGRDGY+FDG+RLRVE AHGGR HS
Sbjct: 28 LKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGGRGHS 87
Query: 61 SSMDRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
SS DRY+S+S+G R +YRVLV+GLPSSASWQDLKDHMR+AGDVCFSQVF D
Sbjct: 88 SSRDRYNSHSNGRGGRGVSRRSEYRVLVSGLPSSASWQDLKDHMRKAGDVCFSQVFHDGR 147
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 159
G TGIVDYT+YDDMKYAI+KLD SEFRNAFS+ YVRVREY
Sbjct: 148 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGYVRVREY 187
>gi|448878370|gb|AGE46148.1| arginine/serine-rich splicing factor SR27 transcript I [Sorghum
bicolor]
Length = 230
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/159 (81%), Positives = 141/159 (88%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLKIPPRPPGYAF+EFED RDA+DAI GRDGYNFDGYRLRVELAHGGR S S
Sbjct: 30 YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGGRGQSYS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 90 YDRSSSYSSARRGGVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETI 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 150 GIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYDA 188
>gi|52140010|gb|AAU29332.1| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays]
Length = 241
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/159 (81%), Positives = 141/159 (88%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLKIPPRPPGYAF+EFED RDA+DAI GRDGYNFDGYRLRVELAHGGR S S
Sbjct: 30 YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGGRGQSYS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 90 YDRSSSYSSACRGGVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETI 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GIVDYT+YDDMKYAIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 150 GIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYDA 188
>gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays]
gi|413944989|gb|AFW77638.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 253
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 127/159 (79%), Positives = 142/159 (89%), Gaps = 1/159 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IV+IDLKIPPRPPG+AF+EFED RDAEDAI GRDGYNFDG+RLRVELAHGGR +SS
Sbjct: 30 YGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGRDGYNFDGHRLRVELAHGGR-GTSS 88
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G
Sbjct: 89 FDRSSSYSSAGQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATI 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GI DYT+Y+DMK+AIRKLD SEFRNAFSR+YVRVREYD+
Sbjct: 149 GIADYTNYEDMKHAIRKLDDSEFRNAFSRTYVRVREYDA 187
>gi|68035998|gb|AAY84875.1| alternative splicing regulator [Triticum aestivum]
Length = 254
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/159 (74%), Positives = 138/159 (86%), Gaps = 2/159 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPIVDIDLKIPPRPP YAF+EFED RDA+DAI GRDGY+FDG +LRVELAHGG+ S
Sbjct: 30 YGPIVDIDLKIPPRPPVYAFVEFEDPRDADDAIYGRDGYDFDGCKLRVELAHGGK--GPS 87
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR +SY+S G RG RRSDYRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+ G +T
Sbjct: 88 FDRPNSYTSSGRRGALRRSDYRVIVTGLPSSASWQDLKDHMRRAGDVCFSDVYPGAGAIT 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GIV++ +Y+DMK+AIRKLD SEFRNAFSR+Y+RVREY++
Sbjct: 148 GIVEFPNYEDMKHAIRKLDDSEFRNAFSRTYIRVREYNA 186
>gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays]
gi|413944988|gb|AFW77637.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 264
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 127/159 (79%), Positives = 142/159 (89%), Gaps = 1/159 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IV+IDLKIPPRPPG+AF+EFED RDAEDAI GRDGYNFDG+RLRVELAHGGR +SS
Sbjct: 30 YGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGRDGYNFDGHRLRVELAHGGR-GTSS 88
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G
Sbjct: 89 FDRSSSYSSAGQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATI 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GI DYT+Y+DMK+AIRKLD SEFRNAFSR+YVRVREYD+
Sbjct: 149 GIADYTNYEDMKHAIRKLDDSEFRNAFSRTYVRVREYDA 187
>gi|30678395|ref|NP_850934.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|22135918|gb|AAM91541.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|30023782|gb|AAP13424.1| At1g02840 [Arabidopsis thaliana]
gi|332189357|gb|AEE27478.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 285
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 145/239 (60%), Positives = 166/239 (69%), Gaps = 15/239 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+V IDLK+PPRPPGYAF+EF+D RDAEDAI GRDGY+FDG+RLRVELAHGGRR S
Sbjct: 30 YGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGGRRSSDD 89
Query: 63 MDRYSSYSSGGSRGV---------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 113
+ G SRRS++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQ
Sbjct: 90 TRGSFNGGGRGGGRGRGDGGSRGPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQ 149
Query: 114 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSP 173
V+RD G TG+VDYT Y+DMKYA++KLD +EFRNAFS YVRVREYDSR+ SRSP
Sbjct: 150 VYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYDSRKD-----SRSP 204
Query: 174 YYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 232
RS S+S RSRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 205 SRGRSYSKS-RSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 262
>gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
Length = 272
Score = 243 bits (619), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 142/239 (59%), Positives = 162/239 (67%), Gaps = 15/239 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+V IDLK+PPRPPGYAF+EF+D RDAEDAI GRDGY+FDG+RLRVELAHGGRR S
Sbjct: 30 YGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGGRRSSDD 89
Query: 63 MDRYSSYSSGGSRGV---------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 113
+ G SRRS++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQ
Sbjct: 90 TRGSFNGGGRGGGRGRGDGGSRGPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQ 149
Query: 114 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSP 173
V+RD G TG+VDYT Y+DMKYA++KLD +EFRNAFS YVRVREYDSR+ SRSPS
Sbjct: 150 VYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYDSRKD-SRSPS--- 205
Query: 174 YYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 232
RSRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 206 --RGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 262
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 118/157 (75%), Positives = 137/157 (87%), Gaps = 1/157 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IV+IDLK+PPRPPG+AF+EFED RDAEDAI+GRDGYNFDG RLRVELAHGGR +SSS
Sbjct: 30 YGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGYNFDGNRLRVELAHGGRANSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+ S G GVSR ++YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 90 LPN-SHGGGGRRGGVSRHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTI 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 159
GIVDYT+YDDMKYAIRKLD +EF+NAFSR+ +RV+EY
Sbjct: 149 GIVDYTNYDDMKYAIRKLDDTEFKNAFSRAPIRVKEY 185
>gi|108708090|gb|ABF95885.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
Length = 236
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/161 (76%), Positives = 141/161 (87%), Gaps = 1/161 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS-S 61
YG IVDIDLKIPPRPPGYAF+EFED RDAE+A GRDGYNFDG+RLRVE AHGGR + S
Sbjct: 30 YGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGYNFDGHRLRVEPAHGGRGNGGS 89
Query: 62 SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
S DR S++ GG RGVSR S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 90 SFDRPSNFGGGGRRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGT 149
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSR 162
GIVDYT+YDDMKYAI+KLD SEFRNAFS+ ++RV+EYD +
Sbjct: 150 VGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGHIRVKEYDGK 190
>gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 289
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/243 (59%), Positives = 166/243 (68%), Gaps = 19/243 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+V IDLK+PPRPPGYAF+EF+D RDAEDAI GRDGY+FDG+RLRVELAHGGRR S
Sbjct: 30 YGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGGRRSSDD 89
Query: 63 MDRYSSYSSGGSRGV-------------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
+ G SRRS++RVLVTGLPSSASWQDLKDHMR+ GDV
Sbjct: 90 TRGSFNGGGRGGGRGRGDGRGDGGSRGPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDV 149
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 169
CFSQV+RD G TG+VDYT Y+DMKYA++KLD +EFRNAFS YVRVREYDSR+
Sbjct: 150 CFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYDSRKD----- 204
Query: 170 SRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSPS 229
SRSP RS S+S RSRS SP+ K SRRSP+ S +RS RS S
Sbjct: 205 SRSPSRGRSYSKS-RSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKS 263
Query: 230 GSP 232
SP
Sbjct: 264 RSP 266
>gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana]
Length = 270
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/243 (59%), Positives = 166/243 (68%), Gaps = 19/243 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+V IDLK+PPRPPGYAF+EF+D RDAEDAI GRDGY+FDG+RLRVELAHGGRR S
Sbjct: 30 YGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGGRRSSDD 89
Query: 63 MDRYSSYSSGGSRGV-------------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
+ G SRRS++RVLVTGLPSSASWQDLKDHMR+ GDV
Sbjct: 90 TRGSFNGGGRGGGRGRGDGRGDGGSRGPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDV 149
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 169
CFSQV+RD G TG+VDYT Y+DMKYA++KLD +EFRNAFS YVRVREYDSR+
Sbjct: 150 CFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYDSRKD----- 204
Query: 170 SRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSPS 229
SRSP RS S+S RSRS SP+ K SRRSP+ S +RS RS S
Sbjct: 205 SRSPSRGRSYSKS-RSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKS 263
Query: 230 GSP 232
SP
Sbjct: 264 RSP 266
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 138/176 (78%), Gaps = 10/176 (5%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+V IDLK+PPRPPGYAF+EF+D RDAEDAI GRDGY+FDG+RLRVELAHGGRR S
Sbjct: 30 YGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGGRRSSDD 89
Query: 63 MDRYSSYSSGGSRGV---------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 113
+ G SRRS++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQ
Sbjct: 90 TRGSFNGGGRGGGRGRGDGGSRGPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQ 149
Query: 114 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 169
V+RD G TG+VDYT Y+DMKYA++KLD +EFRNAFS YVRVREYDSR+ SRSP
Sbjct: 150 VYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYDSRKD-SRSP 204
>gi|242040955|ref|XP_002467872.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|241921726|gb|EER94870.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|448878354|gb|AGE46140.1| arginine/serine-rich splicing factor SR32 transcript I [Sorghum
bicolor]
Length = 286
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/164 (74%), Positives = 140/164 (85%), Gaps = 3/164 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLK+PPRPPGYAF+EFED RDAEDAI GRDGYNFDG+RLRVE AHGGR ++SS
Sbjct: 30 YGRIVDIDLKVPPRPPGYAFVEFEDARDAEDAIAGRDGYNFDGHRLRVEAAHGGRGNTSS 89
Query: 63 MD---RYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
D + G RGVSR S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ G
Sbjct: 90 YDRSSGFGGGGGGARRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGG 149
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRR 163
G GIVDYT+YDDMKYAI+KLD +EFRNAF R+Y+RV+EYD +R
Sbjct: 150 GTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYDGKR 193
>gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana]
Length = 276
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/243 (58%), Positives = 162/243 (66%), Gaps = 19/243 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+V IDLK+PPRPPGYAF+EF+D RDAEDAI GRDGY+FDG+RLRVELAHGGRR S
Sbjct: 30 YGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGGRRSSDD 89
Query: 63 MDRYSSYSSGGSRGV-------------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
+ G SRRS++RVLVTGLPSSASWQDLKDHMR+ GDV
Sbjct: 90 TRGSFNGGGRGGGRGRGDGRGDGGSRGPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDV 149
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 169
CFSQV+RD G TG+VDYT Y+DMKYA++KLD +EFRNAFS YVRVREYDSR+ SRSP
Sbjct: 150 CFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYDSRKD-SRSP 208
Query: 170 SRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSPS 229
S RSRS SP+ K SRRSP+ S +RS RS S
Sbjct: 209 S-----RGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKS 263
Query: 230 GSP 232
SP
Sbjct: 264 RSP 266
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/157 (75%), Positives = 136/157 (86%), Gaps = 1/157 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IV+IDLK+PPRPPG+AF+EFED RDAEDAI GRDGYNFDG RLRVELAHGGR +SSS
Sbjct: 30 YGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIHGRDGYNFDGNRLRVELAHGGRANSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+ S G GVSR ++YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 90 LPN-SYGGGGRRGGVSRHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTI 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 159
GIVDYT+YDDMKYAIRKLD +EF+NAFSR+ +RV+EY
Sbjct: 149 GIVDYTNYDDMKYAIRKLDDTEFKNAFSRAPIRVKEY 185
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/180 (67%), Positives = 138/180 (76%), Gaps = 14/180 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+V IDLK+PPRPPGYAF+EF+D RDAEDAI GRDGY+FDG+RLRVELAHGGRR S
Sbjct: 30 YGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGGRRSSDD 89
Query: 63 MDRYSSYSSGGSRGV-------------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
+ G SRRS++RVLVTGLPSSASWQDLKDHMR+ GDV
Sbjct: 90 TRGSFNGGGRGGGRGRGDGRGDGGSRGPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDV 149
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 169
CFSQV+RD G TG+VDYT Y+DMKYA++KLD +EFRNAFS YVRVREYDSR+ SRSP
Sbjct: 150 CFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYDSRKD-SRSP 208
>gi|115452963|ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group]
gi|113548553|dbj|BAF11996.1| Os03g0344100 [Oryza sativa Japonica Group]
Length = 264
Score = 240 bits (612), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 123/159 (77%), Positives = 140/159 (88%), Gaps = 1/159 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH-SS 61
YG IVDIDLKIPPRPPGYAF+EFED RDAE+A GRDGYNFDG+RLRVE AHGGR + S
Sbjct: 30 YGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGYNFDGHRLRVEPAHGGRGNGGS 89
Query: 62 SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
S DR S++ GG RGVSR S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 90 SFDRPSNFGGGGRRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGT 149
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
GIVDYT+YDDMKYAI+KLD SEFRNAFS+ ++RV+EYD
Sbjct: 150 VGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGHIRVKEYD 188
>gi|448878366|gb|AGE46146.1| arginine/serine-rich splicing factor SR30 transcript V [Sorghum
bicolor]
Length = 278
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 125/159 (78%), Positives = 140/159 (88%), Gaps = 1/159 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IV+IDLKIPPRPPG+AF+EFED DAEDAI GRDGYNFDG+RLRVELAHGGR SS
Sbjct: 30 YGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGRDGYNFDGHRLRVELAHGGR-GPSS 88
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G
Sbjct: 89 FDRSSSYSSAGQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATI 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GI DYT+Y+DMK+AIRKLD SEFRNAFSR+Y+RVREYD+
Sbjct: 149 GIADYTNYEDMKHAIRKLDDSEFRNAFSRTYIRVREYDA 187
>gi|448878356|gb|AGE46141.1| arginine/serine-rich splicing factor SR32 transcript II [Sorghum
bicolor]
Length = 322
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 122/164 (74%), Positives = 140/164 (85%), Gaps = 3/164 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLK+PPRPPGYAF+EFED RDAEDAI GRDGYNFDG+RLRVE AHGGR ++SS
Sbjct: 30 YGRIVDIDLKVPPRPPGYAFVEFEDARDAEDAIAGRDGYNFDGHRLRVEAAHGGRGNTSS 89
Query: 63 MD---RYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
D + G RGVSR S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ G
Sbjct: 90 YDRSSGFGGGGGGARRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGG 149
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRR 163
G GIVDYT+YDDMKYAI+KLD +EFRNAF R+Y+RV+EYD +R
Sbjct: 150 GTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYDGKR 193
>gi|219363191|ref|NP_001137034.1| uncharacterized protein LOC100217203 [Zea mays]
gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
gi|194693886|gb|ACF81027.1| unknown [Zea mays]
gi|194698082|gb|ACF83125.1| unknown [Zea mays]
gi|413955774|gb|AFW88423.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 1 [Zea mays]
gi|413955775|gb|AFW88424.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 2 [Zea mays]
Length = 285
Score = 239 bits (610), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 120/163 (73%), Positives = 139/163 (85%), Gaps = 2/163 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLK+PPRPPGYAF+EFED RDAE+AI GRDGYNFDG+RLRVE AHGGR ++SS
Sbjct: 30 YGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGYNFDGHRLRVEAAHGGRGNASS 89
Query: 63 MD--RYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
D G RGVSR S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 90 HDRSSGFGGGGGARRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGG 149
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRR 163
GIVDYT+YDDMKYAI+KLD +EFRNAF R+Y+RV+EY+ +R
Sbjct: 150 TVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYNGKR 192
>gi|226496385|ref|NP_001151386.1| LOC100285019 [Zea mays]
gi|195646352|gb|ACG42644.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 275
Score = 239 bits (610), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 126/159 (79%), Positives = 141/159 (88%), Gaps = 2/159 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IV+IDLKIPPRPPG+AF+EFED DAEDAI GRDGYNFDG+RLRVELAHGGR +SS
Sbjct: 30 YGRIVEIDLKIPPRPPGFAFVEFEDA-DAEDAIYGRDGYNFDGHRLRVELAHGGR-GTSS 87
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G
Sbjct: 88 FDRSSSYSSAGQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATI 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GI DYT+Y+DMK+AIRKLD SEFRNAFSR+YVRVREYD+
Sbjct: 148 GIADYTNYEDMKHAIRKLDDSEFRNAFSRTYVRVREYDA 186
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 119/160 (74%), Positives = 135/160 (84%), Gaps = 3/160 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IV+IDLK+PPRPPG+AF+EFED RDAEDAI GRDGYNFDG RLRVELAHGGR +SSS
Sbjct: 30 YGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIHGRDGYNFDGNRLRVELAHGGRANSSS 89
Query: 63 MDR---YSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
+ G GVSR ++YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+
Sbjct: 90 LPNSYGGGGGGGGRRGGVSRHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGD 149
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 159
G TGIVDYT+YDDMKYAIRKLD SEFRNAFSR+ +RV+EY
Sbjct: 150 GTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAPIRVKEY 189
>gi|413955773|gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/163 (72%), Positives = 138/163 (84%), Gaps = 2/163 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLK+PPRPPGYAF+EFED RDAE+AI GRDGYNFDG+RLRVE AHGGR ++SS
Sbjct: 30 YGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGYNFDGHRLRVEAAHGGRGNASS 89
Query: 63 MDRYSSYSSGGSRGVSR--RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
DR S + GG S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 90 HDRSSGFGGGGGARRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGG 149
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRR 163
GIVDYT+YDDMKYAI+KLD +EFRNAF R+Y+RV+EY+ +R
Sbjct: 150 TVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYNGKR 192
>gi|448878358|gb|AGE46142.1| arginine/serine-rich splicing factor SR30 transcript I [Sorghum
bicolor]
Length = 255
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/159 (78%), Positives = 140/159 (88%), Gaps = 1/159 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IV+IDLKIPPRPPG+AF+EFED DAEDAI GRDGYNFDG+RLRVELAHGGR SS
Sbjct: 30 YGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGRDGYNFDGHRLRVELAHGGR-GPSS 88
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G
Sbjct: 89 FDRSSSYSSAGQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATI 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
GI DYT+Y+DMK+AIRKLD SEFRNAFSR+Y+RVREYD+
Sbjct: 149 GIADYTNYEDMKHAIRKLDDSEFRNAFSRTYIRVREYDA 187
>gi|255564164|ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537641|gb|EEF39264.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 292
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/158 (81%), Positives = 140/158 (88%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPI IDLKIPPRPPGYAF+EFE+ RDAEDAIRGRDGY+FDG++LRVELAHGGR HSSS
Sbjct: 30 YGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHQLRVELAHGGRGHSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
S G RGVSRRS+YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD G T
Sbjct: 90 DRHSSHSGGGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTT 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
GIVDYT+Y+DMK+AI+KLD SEFRNAFSR+YVRV+EYD
Sbjct: 150 GIVDYTNYEDMKHAIKKLDDSEFRNAFSRAYVRVKEYD 187
>gi|297843082|ref|XP_002889422.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
gi|297335264|gb|EFH65681.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/245 (55%), Positives = 158/245 (64%), Gaps = 15/245 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+V IDLK+PPRPPGYAF+EF+D RDAEDAI+GRDGY+FDG+RLRVELAHGGRR S
Sbjct: 30 YGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIQGRDGYDFDGHRLRVELAHGGRRSSDD 89
Query: 63 MDRYSSYSSGGSRGV-------------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
+ G SRRS++RVLVTGLPSSASWQDLKDHMR+ GDV
Sbjct: 90 TRGSFNGGGRGGGRGRGDGRGDGGSRGPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDV 149
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRS--YSR 167
CFSQV+RD G TG+VDYT Y+DMKYA++KLD +EFRNAFS YVRVREYDSR+
Sbjct: 150 CFSQVYRDGRGTTGVVDYTCYEDMKYAVKKLDDTEFRNAFSHGYVRVREYDSRKDSRSPS 209
Query: 168 SPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRS 227
RSRS SP+ K SRRSP+ S +RS RS
Sbjct: 210 RGRSYSRSRSRSRSRGRSLSRSRSRSRSRSRSRSRSRSPKAKSSRRSPAKSTSRSPGPRS 269
Query: 228 PSGSP 232
S SP
Sbjct: 270 KSRSP 274
>gi|55792397|gb|AAV65309.1| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/157 (74%), Positives = 136/157 (86%), Gaps = 1/157 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IV+IDLK+PPRPPG+AF+EFED RDAEDAI+GRDGYNFDG RLRVELAHGGR +SSS
Sbjct: 30 YGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGYNFDGNRLRVELAHGGRANSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+ S G GVSR ++YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ G
Sbjct: 90 LPN-SHGGGGRRGGVSRHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREVVGTI 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 159
GIVDYT+YDDMKYAIRKLD +EF+NAFSR+ +RV+EY
Sbjct: 149 GIVDYTNYDDMKYAIRKLDDTEFKNAFSRAPIRVKEY 185
>gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana]
Length = 261
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/181 (65%), Positives = 137/181 (75%), Gaps = 13/181 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+V IDLK+PPRPPGYAF+EF+D RDAEDAI GRDGY+FDG+RLRVELAHGGRR S
Sbjct: 30 YGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGGRRSSDD 89
Query: 63 MDRYSSYSSGGSRGV-------------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
+ G SRRS++RVLVTGLPSSASWQDLKDHMR+ GDV
Sbjct: 90 TRGSFNGGGRGGGRGRGDGRGDGGSRGPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDV 149
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 169
CFSQV+RD G TG+VDYT Y+DMKYA++KLD +EFRNAFS YVRVREYDSR+ R+
Sbjct: 150 CFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYDSRKDSRRAE 209
Query: 170 S 170
+
Sbjct: 210 A 210
>gi|52140006|gb|AAU29329.1| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays]
gi|413955776|gb|AFW88425.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 257
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 120/163 (73%), Positives = 139/163 (85%), Gaps = 2/163 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLK+PPRPPGYAF+EFED RDAE+AI GRDGYNFDG+RLRVE AHGGR ++SS
Sbjct: 30 YGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGYNFDGHRLRVEAAHGGRGNASS 89
Query: 63 MD--RYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
D G RGVSR S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 90 HDRSSGFGGGGGARRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGG 149
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRR 163
GIVDYT+YDDMKYAI+KLD +EFRNAF R+Y+RV+EY+ +R
Sbjct: 150 TVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYNGKR 192
>gi|357112280|ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 289
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/166 (73%), Positives = 137/166 (82%), Gaps = 7/166 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
YG IVDIDLK+PPRPPGYAF+EFED RDAEDA GRDGYNFDG RLRVE AHGGR
Sbjct: 30 YGRIVDIDLKVPPRPPGYAFVEFEDPRDAEDACAGRDGYNFDGNRLRVEPAHGGRGSGGP 89
Query: 62 SMDRYSSYSSGGSRG------VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
S DR SS+ GG G VSR +DYRVLVTGLPSSASWQDLKDHMRRAGDVCFS+V+
Sbjct: 90 SHDRSSSFGGGGGGGGGGRRGVSRHTDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVY 149
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
R+ G TGIVDYT+YDDMKYAI+KLD +EF+NAFS+ Y+RV+EYD+
Sbjct: 150 REGSGTTGIVDYTNYDDMKYAIKKLDDTEFKNAFSKGYIRVKEYDA 195
>gi|168009612|ref|XP_001757499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691193|gb|EDQ77556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/168 (72%), Positives = 134/168 (79%), Gaps = 14/168 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLK+PPRPPGY F+EFED RDAEDAIRGRDGYNFDG RLRVE+AHGGR +
Sbjct: 30 YGRIVDIDLKLPPRPPGYCFIEFEDGRDAEDAIRGRDGYNFDGNRLRVEIAHGGRGPPPA 89
Query: 63 MDRYSSY-------------SSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
+DRYS Y G + GVSRRS+YRV VTGLPSSASWQDLKDHMRRAGDV
Sbjct: 90 VDRYSIYSSGGRGGGGSAADCGGRAGGVSRRSEYRVTVTGLPSSASWQDLKDHMRRAGDV 149
Query: 110 CFSQVFRD-RGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 156
CF+QVFRD G GIVD+T+YDDMKYAIRKLD SEFRN FSRS++RV
Sbjct: 150 CFAQVFRDGTSGTMGIVDFTNYDDMKYAIRKLDDSEFRNPFSRSFIRV 197
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 136/170 (80%), Gaps = 16/170 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR-HSS 61
YG IVDIDLK+PPRPPGY F+EFED RDAEDAIRGRDGYNFDG RLRVE+AHGGR +
Sbjct: 30 YGRIVDIDLKLPPRPPGYCFIEFEDARDAEDAIRGRDGYNFDGNRLRVEIAHGGRGPPPA 89
Query: 62 SMDRYSSY--------------SSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG 107
S+DRYS Y + G + GVSRRS+YRV VTGLPSSASWQDLKDHMRRAG
Sbjct: 90 SVDRYSIYSSGGGRGGGGSASENGGRAGGVSRRSEYRVTVTGLPSSASWQDLKDHMRRAG 149
Query: 108 DVCFSQVFRD-RGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 156
DVCF+QVFRD G GIVD+T+YDDMKYAIRKLD SEFRN FSRS++RV
Sbjct: 150 DVCFAQVFRDGSAGTMGIVDFTNYDDMKYAIRKLDDSEFRNPFSRSFIRV 199
>gi|108708089|gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
gi|215692748|dbj|BAG88168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192809|gb|EEC75236.1| hypothetical protein OsI_11526 [Oryza sativa Indica Group]
gi|222624911|gb|EEE59043.1| hypothetical protein OsJ_10806 [Oryza sativa Japonica Group]
Length = 286
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/232 (66%), Positives = 177/232 (76%), Gaps = 5/232 (2%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS-S 61
YG IVDIDLKIPPRPPGYAF+EFED RDAE+A GRDGYNFDG+RLRVE AHGGR + S
Sbjct: 30 YGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGYNFDGHRLRVEPAHGGRGNGGS 89
Query: 62 SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
S DR S++ GG RGVSR S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 90 SFDRPSNFGGGGRRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGT 149
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 181
GIVDYT+YDDMKYAI+KLD SEFRNAFS+ ++RV+EYD +R+ S S SRSP SRS+SR
Sbjct: 150 VGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGHIRVKEYDGKRARSYSRSRSPSRSRSKSR 209
Query: 182 SPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRS-PSLSPARSASQRSPSGSP 232
S S S S S S S S+ PS SPARS +SP+ SP
Sbjct: 210 SLSKSPRTRRSASRSRSRSRSVSSRSRSASKGRSPSRSPARS---KSPNASP 258
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 135/176 (76%), Gaps = 10/176 (5%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+V IDLK+PPRPPGYAF+EF+D RDAEDAI GRDGY+FDG+RLRVELAHGGRR S
Sbjct: 30 YGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGGRRSSDD 89
Query: 63 MDRYSSYSSGGSRGV---------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 113
+ G SRRS++RVLVT L SSASWQDLKDH+ + GDVCFSQ
Sbjct: 90 TRGSFNGGGRGGGRGRGDGGSRGPSRRSEFRVLVTWLASSASWQDLKDHIAKGGDVCFSQ 149
Query: 114 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 169
V+RD G TG+VDYT Y+DMKYA++KLD +EFRNAFS YVRVREYDSR+ SRSP
Sbjct: 150 VYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYDSRKD-SRSP 204
>gi|242052807|ref|XP_002455549.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
gi|241927524|gb|EES00669.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
Length = 186
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/152 (80%), Positives = 132/152 (86%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLKIPPRPPGYAF+EFED RDA+DAI GRDGYNFDGYRLRVELAHGGR S S
Sbjct: 30 YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGGRGQSYS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 90 YDRSSSYSSARRGGVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETI 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 154
GIVDYT+YDDMKYAIRKLD S+FRNAFSR +
Sbjct: 150 GIVDYTNYDDMKYAIRKLDDSQFRNAFSRCSI 181
>gi|326495240|dbj|BAJ85716.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504388|dbj|BAJ91026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510429|dbj|BAJ87431.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523109|dbj|BAJ88595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 118/166 (71%), Positives = 132/166 (79%), Gaps = 8/166 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR----- 57
YG IVDIDLK+PPRPPGYAF+EFED RDAEDA GRDGYNFDG RLRVE AHGGR
Sbjct: 30 YGRIVDIDLKVPPRPPGYAFVEFEDPRDAEDACAGRDGYNFDGNRLRVEPAHGGRGSGGP 89
Query: 58 ---RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
R S + G RGVSR +DYRVLVTGLPSSASWQDLKDHMRRAGDVCFS+V
Sbjct: 90 SHDRSGSFGGGGGAGGGSGRRGVSRHTDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEV 149
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
+R+ GG GI DYT+YDDMKYAI+KLD +EF+NAFS+ Y+RV+EYD
Sbjct: 150 YREGGGTIGIADYTNYDDMKYAIKKLDDTEFKNAFSKGYIRVKEYD 195
>gi|297814065|ref|XP_002874916.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
gi|297320753|gb|EFH51175.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 115/163 (70%), Positives = 128/163 (78%), Gaps = 10/163 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+V IDLKIPPRPPGYAF+EFED RDA+DAI GRDGY+FDG+RLRVELAHGGRR S
Sbjct: 30 YGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYDFDGHRLRVELAHGGRRSSHD 89
Query: 63 MDRYSSYSSGGSRGV----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S G R SRRS+YRV+V+GLPSSASWQDLKDHMR+ G+VCFS
Sbjct: 90 ARGSYSGGGRGGRDGGDGGVRGRGPSRRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFS 149
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVR 155
QVFRD G TGIVDYTSY+DMKYAI+KLD +EFRNAFS YVR
Sbjct: 150 QVFRDGRGTTGIVDYTSYEDMKYAIKKLDDTEFRNAFSHGYVR 192
>gi|222618302|gb|EEE54434.1| hypothetical protein OsJ_01505 [Oryza sativa Japonica Group]
Length = 270
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/166 (72%), Positives = 131/166 (78%), Gaps = 3/166 (1%)
Query: 13 IPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG 72
I R F +FED RDA+DAI GRDGYNFDGYRLRVELAHGGR S S DR SYSSG
Sbjct: 89 IREREVEDLFYKFEDPRDADDAICGRDGYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSG 148
Query: 73 GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 132
GVSRRS+YRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+Y+D
Sbjct: 149 RRGGVSRRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYED 208
Query: 133 MKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRS 178
MKYAIRKLD SEFRNAFSR+Y+RVRE SR SR+P SP RS
Sbjct: 209 MKYAIRKLDDSEFRNAFSRAYIRVRESISR---SRTPVSSPSRGRS 251
>gi|255557727|ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223540939|gb|EEF42497.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 264
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 145/208 (69%), Gaps = 29/208 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DI+LKIPPRPP Y F+EFE+ RDAEDAIRGRDGYNFDG RLRVELAHGGR SSS
Sbjct: 30 YGRILDIELKIPPRPPCYCFVEFENTRDAEDAIRGRDGYNFDGCRLRVELAHGGRGQSSS 89
Query: 63 -------MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
SGG +SR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V
Sbjct: 90 DRRGGYGGSGGGGSGSGGRYCISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS 149
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD--------------- 160
RD G GIVDYT+Y+DMKYAIRKLD +EFRN ++R+Y+RV+ Y+
Sbjct: 150 RDSDGTFGIVDYTNYEDMKYAIRKLDDTEFRNPWARAYIRVKMYENSPSRSRSRSRSRSR 209
Query: 161 -----SRRSYSRSPSRSPYYSRSRSRSP 183
+S RSPSRS S+SRS SP
Sbjct: 210 SPRRNRSKSLERSPSRS--VSKSRSASP 235
>gi|30679143|ref|NP_567235.3| splicing factor SR1B [Arabidopsis thaliana]
gi|332656770|gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 278
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/168 (70%), Positives = 130/168 (77%), Gaps = 13/168 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+V IDLKIPPRPPGYAF+EFED RDA+DAI GRDGY+FDG+ LRVELAHGGRR S
Sbjct: 30 YGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYDFDGHHLRVELAHGGRRSSHD 89
Query: 63 MDRYSSYSSGGSRGV----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S G RG SRRS+YRV+V+GLPSSASWQDLKDHMR+ G+VCFS
Sbjct: 90 ARGSYSGRGRGGRGGGDGGGRERGPSRRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFS 149
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
QVFRD G TGIVDYTSY+DMKYA LD +EFRNAFS YVRVREYD
Sbjct: 150 QVFRDGRGTTGIVDYTSYEDMKYA---LDDTEFRNAFSHEYVRVREYD 194
>gi|302804889|ref|XP_002984196.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
gi|300148045|gb|EFJ14706.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
Length = 298
Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 118/168 (70%), Positives = 134/168 (79%), Gaps = 12/168 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH-GGRRHSS 61
YG I+DIDLK+PPRPPGYAF+EF+D RDAEDAI+ RDGY FDG+RLRVE AH GGR H S
Sbjct: 29 YGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIKARDGYVFDGHRLRVEFAHSGGRGHPS 88
Query: 62 -SMDRYSS----------YSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
DR+S+ GG RGVSRRS+YRV+VTGLPSSASWQDLKDHMR AGDVC
Sbjct: 89 YGGDRHSNSYRGGGGGGGGGGGGGRGVSRRSEYRVVVTGLPSSASWQDLKDHMRTAGDVC 148
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 158
F+QVFR+ G GIVD+T+YDDMK AIRKLD +EFRN FS SY+RVRE
Sbjct: 149 FAQVFRESNGTRGIVDFTNYDDMKNAIRKLDDTEFRNPFSHSYIRVRE 196
>gi|302781020|ref|XP_002972284.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
gi|300159751|gb|EFJ26370.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
Length = 288
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/168 (70%), Positives = 134/168 (79%), Gaps = 12/168 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH-GGRRHSS 61
YG I+DIDLK+PPRPPGYAF+EF+D RDAEDAI+ RDGY FDG+RLRVE AH GGR H S
Sbjct: 29 YGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIKARDGYVFDGHRLRVEFAHSGGRGHPS 88
Query: 62 -SMDRYSS----------YSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
DR+S+ GG RGVSRRS+YRV+VTGLPSSASWQDLKDHMR AGDVC
Sbjct: 89 YGGDRHSNSYRGGGGGGGGGGGGGRGVSRRSEYRVVVTGLPSSASWQDLKDHMRTAGDVC 148
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 158
F+QVFR+ G GIVD+T+YDDMK AIRKLD +EFRN FS SY+RVRE
Sbjct: 149 FAQVFRESNGTRGIVDFTNYDDMKNAIRKLDDTEFRNPFSHSYIRVRE 196
>gi|297816162|ref|XP_002875964.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
gi|297321802|gb|EFH52223.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
Length = 301
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 130/171 (76%), Gaps = 13/171 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDI+LK+PPRPP Y F+EFE RDAEDAI+GRDGYNFDG RLRVELAHGGR SSS
Sbjct: 30 YGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYNFDGCRLRVELAHGGRGQSSS 89
Query: 63 MDRYSSYSSGGSR-------------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
R GG GVSR S++RV+V GLPSSASWQDLKDHMR+AGDV
Sbjct: 90 DRRGGYGGGGGGGYGGGGGGGGSARFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDV 149
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
CF++V RD G G+VDYT+YDDMKYAIRKLD +EFRN ++R ++RV++Y+
Sbjct: 150 CFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 200
>gi|115436242|ref|NP_001042879.1| Os01g0316600 [Oryza sativa Japonica Group]
gi|113532410|dbj|BAF04793.1| Os01g0316600, partial [Oryza sativa Japonica Group]
Length = 178
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/136 (80%), Positives = 119/136 (87%)
Query: 25 FEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYR 84
FED RDA+DAI GRDGYNFDGYRLRVELAHGGR S S DR SYSSG GVSRRS+YR
Sbjct: 1 FEDPRDADDAICGRDGYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYR 60
Query: 85 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 144
V+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+Y+DMKYAIRKLD SE
Sbjct: 61 VMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAIRKLDDSE 120
Query: 145 FRNAFSRSYVRVREYD 160
FRNAFSR+Y+RVREYD
Sbjct: 121 FRNAFSRAYIRVREYD 136
>gi|357464165|ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
gi|355491412|gb|AES72615.1| RNA-binding protein [Medicago truncatula]
Length = 380
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 132/171 (77%), Gaps = 13/171 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I++I+LK+PPRPP Y F+EF++ RDAEDAIRGRDGYNFDG RLRVELAHGGR SSS
Sbjct: 137 YGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSS 196
Query: 63 -------------MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
+ GG GVSR S++RV+V GLPSSASWQDLKDHMR+AGDV
Sbjct: 197 DRRGYGGGGGGGGRGGGGDSAGGGRFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDV 256
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
CF++V RD G G+VDYT+YDDMKYAIRKLD +EFRN ++RSY+RVR+Y+
Sbjct: 257 CFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYE 307
>gi|224285040|gb|ACN40249.1| unknown [Picea sitchensis]
Length = 398
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/159 (72%), Positives = 130/159 (81%), Gaps = 6/159 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLK+PPRPPGY F+EF++ RDAEDAIRGRDGY FDG+RLRVE AHG +SS
Sbjct: 29 YGRIIDIDLKLPPRPPGYCFIEFDNARDAEDAIRGRDGYKFDGHRLRVERAHG---RASS 85
Query: 63 MDRY--SSYSSGGSRGVSRRSD-YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
+D Y S S S G+ RRS YRV+V GLP+SASWQDLKDHMRRAGDVCFSQV+R
Sbjct: 86 VDVYYGSHSSGSRSSGLYRRSTGYRVIVHGLPTSASWQDLKDHMRRAGDVCFSQVYRKGS 145
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 158
G G+VDYTSY+DMKYAIRKLD SEFRN FSRSY+RVRE
Sbjct: 146 GTVGVVDYTSYEDMKYAIRKLDDSEFRNPFSRSYIRVRE 184
>gi|359490737|ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359490739|ref|XP_003634149.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
gi|302143975|emb|CBI23080.3| unnamed protein product [Vitis vinifera]
Length = 250
Score = 216 bits (550), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 126/196 (64%), Positives = 150/196 (76%), Gaps = 5/196 (2%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+D++LKIPPRPP Y F+EFE+ RDAEDAIRGRDGYNFDG RLRVELAHGGR SSS
Sbjct: 30 YGRILDVELKIPPRPPCYCFVEFENSRDAEDAIRGRDGYNFDGCRLRVELAHGGRGQSSS 89
Query: 63 MDRYSSYSSGGSRGVSR--RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
DR + SGG S+YRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G
Sbjct: 90 SDRRGGHGSGGGGRFGVSRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDADG 149
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD---SRRSYSRSPSRSPYYSR 177
G+VDYT+++DMKYAIRKLD +EFRN ++R+Y+RV+ YD RS S SPSRS R
Sbjct: 150 TFGLVDYTNHEDMKYAIRKLDDTEFRNPWARAYIRVKRYDVSPRSRSRSHSPSRSRSLKR 209
Query: 178 SRSRSPYYSRSRSPSR 193
+RS+S S SRS S+
Sbjct: 210 NRSKSLERSVSRSASK 225
>gi|76573323|gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
Length = 269
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 114/164 (69%), Positives = 130/164 (79%), Gaps = 7/164 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DI+LKIPPRPP Y F+EFE RDAEDAIRGRDGYNFDG RLRVELAHGGR SSS
Sbjct: 30 YGRILDIELKIPPRPPCYCFVEFESSRDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSS 89
Query: 63 MDRYSSYSSGGSRGVSR-------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
DR SY S G G SDYRV++ GLPSSASWQDLKDHMR+AGDVCF++V
Sbjct: 90 SDRRGSYGSSGGGGGGGGRHGISRHSDYRVIIRGLPSSASWQDLKDHMRKAGDVCFAEVS 149
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 159
RD G G+VDYT+Y+DMKYAIRKLD +EFRN ++R+Y+RVREY
Sbjct: 150 RDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTRTYIRVREY 193
>gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|334185842|ref|NP_001190041.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|124301106|gb|ABN04805.1| At3g49430 [Arabidopsis thaliana]
gi|332645020|gb|AEE78541.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645022|gb|AEE78543.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 300
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 128/170 (75%), Gaps = 12/170 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDI+LK+PPRPP Y F+EFE RDAEDAI+GRDGYN DG RLRVELAHGGR SSS
Sbjct: 30 YGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYNLDGCRLRVELAHGGRGQSSS 89
Query: 63 MDRYSSYSSGGSR------------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
R G GVSR S++RV+V GLPSSASWQDLKDHMR+AGDVC
Sbjct: 90 DRRGGYGGGGSGYGGGGGGGGSARFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVC 149
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
F++V RD G G+VDYT+YDDMKYAIRKLD +EFRN ++R ++RV++Y+
Sbjct: 150 FAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199
>gi|12324445|gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514 [Arabidopsis thaliana]
Length = 295
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 128/170 (75%), Gaps = 12/170 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDI+LK+PPRPP Y F+EFE RDAEDAI+GRDGYN DG RLRVELAHGGR SSS
Sbjct: 30 YGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYNLDGCRLRVELAHGGRGQSSS 89
Query: 63 MDRYSSYSSGGSR------------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
R G GVSR S++RV+V GLPSSASWQDLKDHMR+AGDVC
Sbjct: 90 DRRGGYGGGGSGYGGGGGGGGSARFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVC 149
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
F++V RD G G+VDYT+YDDMKYAIRKLD +EFRN ++R ++RV++Y+
Sbjct: 150 FAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199
>gi|255648057|gb|ACU24484.1| unknown [Glycine max]
Length = 267
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/164 (67%), Positives = 133/164 (81%), Gaps = 6/164 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DI+LK+PPRPP Y F+EF++ RDAEDAIRGRDGYNFDG RLRVELAHGGR SSS
Sbjct: 30 YGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSS 89
Query: 63 ------MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
+ + GG G+SR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R
Sbjct: 90 DRRGYGGGGGNGGAGGGRFGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSR 149
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
D G GIVDYT+YDDMKYAIRKLD +EFRN ++R+Y+RVR+Y+
Sbjct: 150 DSEGTFGIVDYTNYDDMKYAIRKLDDAEFRNPWARAYIRVRKYE 193
>gi|145332797|ref|NP_001078264.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645021|gb|AEE78542.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 297
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 128/170 (75%), Gaps = 12/170 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDI+LK+PPRPP Y F+EFE RDAEDAI+GRDGYN DG RLRVELAHGGR SSS
Sbjct: 30 YGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYNLDGCRLRVELAHGGRGQSSS 89
Query: 63 MDRYSSYSSGGSR------------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
R G GVSR S++RV+V GLPSSASWQDLKDHMR+AGDVC
Sbjct: 90 DRRGGYGGGGSGYGGGGGGGGSARFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVC 149
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
F++V RD G G+VDYT+YDDMKYAIRKLD +EFRN ++R ++RV++Y+
Sbjct: 150 FAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYE 199
>gi|357464169|ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
gi|355491414|gb|AES72617.1| RNA-binding protein [Medicago truncatula]
Length = 273
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 132/171 (77%), Gaps = 13/171 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I++I+LK+PPRPP Y F+EF++ RDAEDAIRGRDGYNFDG RLRVELAHGGR SSS
Sbjct: 30 YGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSS 89
Query: 63 -------------MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
+ GG GVSR S++RV+V GLPSSASWQDLKDHMR+AGDV
Sbjct: 90 DRRGYGGGGGGGGRGGGGDSAGGGRFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDV 149
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
CF++V RD G G+VDYT+YDDMKYAIRKLD +EFRN ++RSY+RVR+Y+
Sbjct: 150 CFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYE 200
>gi|357464167|ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
gi|355491413|gb|AES72616.1| RNA-binding protein [Medicago truncatula]
Length = 272
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 132/171 (77%), Gaps = 13/171 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I++I+LK+PPRPP Y F+EF++ RDAEDAIRGRDGYNFDG RLRVELAHGGR SSS
Sbjct: 30 YGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSS 89
Query: 63 -------------MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
+ GG GVSR S++RV+V GLPSSASWQDLKDHMR+AGDV
Sbjct: 90 DRRGYGGGGGGGGRGGGGDSAGGGRFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDV 149
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
CF++V RD G G+VDYT+YDDMKYAIRKLD +EFRN ++RSY+RVR+Y+
Sbjct: 150 CFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYE 200
>gi|363807302|ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
gi|255636783|gb|ACU18725.1| unknown [Glycine max]
Length = 267
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/164 (66%), Positives = 132/164 (80%), Gaps = 6/164 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DI+LK+PPRPP Y F+EF++ RDAEDAIRGRDGYNFDG RLRVELAHGGR SSS
Sbjct: 30 YGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSS 89
Query: 63 ------MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
+ + GG G+SR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R
Sbjct: 90 DRRGYGGGGGNGGAGGGRFGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSR 149
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
D G GIVDYT+YDDMKYAIRKLD +EFRN ++ +Y+RVR+Y+
Sbjct: 150 DSEGTLGIVDYTNYDDMKYAIRKLDDTEFRNPWAIAYIRVRKYE 193
>gi|224132592|ref|XP_002321360.1| predicted protein [Populus trichocarpa]
gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa]
Length = 240
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/161 (65%), Positives = 132/161 (81%), Gaps = 3/161 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+D++LKIPPRPP Y F+EFE+ RDAEDAIRGRDGYNFDG RLRVELAHGGR SS+
Sbjct: 30 YGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSN 89
Query: 63 ---MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
SGG G+SR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 90 DRRGGYGGGGGSGGRFGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSD 149
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
G G+VDYT+++DMKYAIRKLD +EFRN ++R+Y+RV++++
Sbjct: 150 GTFGVVDYTNHEDMKYAIRKLDDTEFRNPWARAYIRVKQHE 190
>gi|224120944|ref|XP_002318458.1| predicted protein [Populus trichocarpa]
gi|222859131|gb|EEE96678.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 132/172 (76%), Gaps = 14/172 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+D++LKIPPRPP Y F+EFE+ RDAEDAIRGRDGYNFDG RLRVELAHGGR SS+
Sbjct: 30 YGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGSRLRVELAHGGRGPSSN 89
Query: 63 MDRYSSYSSGGSR--------------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGD 108
R GG G+SR S++RV+V GLPSSASWQDLKDHMR+AGD
Sbjct: 90 DRRGGYGGGGGGGGGGGGGGGGGGGRLGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGD 149
Query: 109 VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
VCF++V RD G G+VDYT+++DMKYAIRKLD +EF+N ++R+Y+RV++Y+
Sbjct: 150 VCFAEVTRDGDGTLGLVDYTNHEDMKYAIRKLDDTEFKNPWARAYIRVKQYE 201
>gi|388500622|gb|AFK38377.1| unknown [Lotus japonicus]
Length = 174
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 121/140 (86%), Gaps = 1/140 (0%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR-RHSS 61
+GPIVDIDLKIPPRPPGYAF++FED RDAEDAI RDGY+FDG+RLRVELAHGGR SS
Sbjct: 30 FGPIVDIDLKIPPRPPGYAFVQFEDARDAEDAIYYRDGYDFDGFRLRVELAHGGRGSSSS 89
Query: 62 SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
S SRG SRRSDYRVLVTGLP SASWQDLKDHMR+AGDVCFSQVFR+RGGM
Sbjct: 90 VDRYSSYSGGSSSRGASRRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGM 149
Query: 122 TGIVDYTSYDDMKYAIRKLD 141
TGIVDYT+YDDMKYA+RKLD
Sbjct: 150 TGIVDYTNYDDMKYALRKLD 169
>gi|448878372|gb|AGE46149.1| arginine/serine-rich splicing factor SR27 transcript II [Sorghum
bicolor]
Length = 165
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/134 (81%), Positives = 117/134 (87%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLKIPPRPPGYAF+EFED RDA+DAI GRDGYNFDGYRLRVELAHGGR S S
Sbjct: 30 YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGGRGQSYS 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR SSYSS GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 90 YDRSSSYSSARRGGVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETI 149
Query: 123 GIVDYTSYDDMKYA 136
GIVDYT+YDDMKYA
Sbjct: 150 GIVDYTNYDDMKYA 163
>gi|357442431|ref|XP_003591493.1| Serine/arginine-rich splicing factor [Medicago truncatula]
gi|355480541|gb|AES61744.1| Serine/arginine-rich splicing factor [Medicago truncatula]
Length = 390
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/152 (67%), Positives = 117/152 (76%), Gaps = 1/152 (0%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
M YG I IDLK+PPRPP YAF+ F+D +A+DAI DGY+FDG RLRVE AH G +S
Sbjct: 81 MKYGHITRIDLKVPPRPPCYAFVVFKDALNADDAICECDGYDFDGCRLRVEAAHVGYCNS 140
Query: 61 SSMDRYSSYSSG-GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
SS DRYS +S+G G RGVS S+YRVLV LPSSAS QDLKDHMR+AG VCFSQV D
Sbjct: 141 SSRDRYSIHSNGQGGRGVSSHSEYRVLVNRLPSSASCQDLKDHMRKAGAVCFSQVVHDGR 200
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR 151
TGIVDYT+ DDMKYAI+ LD SEF+NAFSR
Sbjct: 201 VTTGIVDYTNCDDMKYAIKNLDGSEFQNAFSR 232
>gi|224128490|ref|XP_002320345.1| predicted protein [Populus trichocarpa]
gi|222861118|gb|EEE98660.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/138 (75%), Positives = 114/138 (82%), Gaps = 2/138 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPI IDLKIPPRPPGYAF+EFE+ RDAEDAIRGRDGY+FDG+RLRVELAHGGR HSSS
Sbjct: 30 YGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGHSSS 89
Query: 63 MDRYSSYSSGGSRGVSRRS--DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
S SGG +YRV+VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD G
Sbjct: 90 DRHSSYSGSGGRGRGGVSRRSEYRVVVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSG 149
Query: 121 MTGIVDYTSYDDMKYAIR 138
TGIVDYT+Y+DMKYA++
Sbjct: 150 TTGIVDYTNYEDMKYAVK 167
>gi|227206256|dbj|BAH57183.1| AT4G02430 [Arabidopsis thaliana]
Length = 176
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/149 (69%), Positives = 116/149 (77%), Gaps = 10/149 (6%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
+ YGP+V IDLKIPPRPPGYAF+EFED RDA+DAI GRDGY+FDG+ LRVELAHGGRR S
Sbjct: 26 LKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYDFDGHHLRVELAHGGRRSS 85
Query: 61 SSMDRYSSYSSGGSRGV----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
S G RG SRRS+YRV+V+GLPSSASWQDLKDHMR+ G+VC
Sbjct: 86 HDARGSYSGRGRGGRGGGDGGGRERGPSRRSEYRVVVSGLPSSASWQDLKDHMRKGGEVC 145
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
FSQVFRD G TGIVDYTSY+DMKYAI+K
Sbjct: 146 FSQVFRDGRGTTGIVDYTSYEDMKYAIKK 174
>gi|30679138|ref|NP_849537.1| splicing factor SR1B [Arabidopsis thaliana]
gi|26451203|dbj|BAC42705.1| unknown protein [Arabidopsis thaliana]
gi|332656771|gb|AEE82171.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 178
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/147 (70%), Positives = 115/147 (78%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+V IDLKIPPRPPGYAF+EFED RDA+DAI GRDGY+FDG+ LRVELAHGGRR S
Sbjct: 30 YGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYDFDGHHLRVELAHGGRRSSHD 89
Query: 63 MDRYSSYSSGGSRGV----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S G RG SRRS+YRV+V+GLPSSASWQDLKDHMR+ G+VCFS
Sbjct: 90 ARGSYSGRGRGGRGGGDGGGRERGPSRRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFS 149
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRK 139
QVFRD G TGIVDYTSY+DMKYAI+K
Sbjct: 150 QVFRDGRGTTGIVDYTSYEDMKYAIKK 176
>gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana]
gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana]
Length = 294
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 102/146 (69%), Positives = 114/146 (78%), Gaps = 10/146 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+V IDLKIPPRPPGYAF+EFED RDA+DAI GRDGY+FDG+ LRVELAHGGRR S
Sbjct: 30 YGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYDFDGHHLRVELAHGGRRSSHD 89
Query: 63 MDRYSSYSSGGSRGV----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S G RG SRRS+YRV+V+GLPSSASWQDLKDHMR+ G+VCFS
Sbjct: 90 ARGSYSGRGRGGRGGGDGGGRERGPSRRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFS 149
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIR 138
QVFRD G TGIVDYTSY+DMKYA+R
Sbjct: 150 QVFRDGRGTTGIVDYTSYEDMKYAVR 175
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 119/160 (74%), Gaps = 19/160 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLKIPPRPPG+AF+EFED RDAEDAIRGRDGYNFDG RLRVELAHGGR +SSS
Sbjct: 96 YGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAHGGRGNSSS 155
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+ +S G GVSR ++YRVLVTGLPSSASWQDLKDHMR AGDV
Sbjct: 156 FN--NSGGGGRRGGVSRHTEYRVLVTGLPSSASWQDLKDHMRNAGDVV------------ 201
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSR 162
T ++ IRKLD SEF+NAFS++Y+RV+EYD +
Sbjct: 202 -----TLKCTVRVVIRKLDDSEFKNAFSKAYIRVKEYDGK 236
>gi|356516144|ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 263
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/231 (57%), Positives = 156/231 (67%), Gaps = 30/231 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DI+LK+PPRPP Y F+EF++ RDAEDAIRGRDGYNFDG RLRVELAHGGR SSS
Sbjct: 30 YGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSS 89
Query: 63 MDRYSSYSSGGSRG------------VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
R GG G +SR S++RV+V GLPSSASWQDLKDHMR+AGDVC
Sbjct: 90 DRRGYGGGGGGGGGGGGSGAGGGRFGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVC 149
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPS 170
F++V RD G GIVDYT+YDDMKYAIRKLD +EFRN ++R+Y+RVR+Y+S RS S S S
Sbjct: 150 FAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVRKYESSRSRSHSRS 209
Query: 171 RSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 221
S S R RS RS S SRS RS S+SP +
Sbjct: 210 PSRSRSPKRVRSRSLERSVSRSRS------------------RSRSVSPIK 242
>gi|6561944|emb|CAB62448.1| PRE-MRNA SPLICING FACTOR SF2-like protein [Arabidopsis thaliana]
Length = 243
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/150 (64%), Positives = 110/150 (73%), Gaps = 12/150 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDI+LK+PPRPP Y F+EFE RDAEDAI+GRDGYN DG RLRVELAHGGR SSS
Sbjct: 30 YGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYNLDGCRLRVELAHGGRGQSSS 89
Query: 63 MDRYSSYSSGGSR------------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
R G GVSR S++RV+V GLPSSASWQDLKDHMR+AGDVC
Sbjct: 90 DRRGGYGGGGSGYGGGGGGGGSARFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVC 149
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 140
F++V RD G G+VDYT+YDDMKYA+R L
Sbjct: 150 FAEVTRDSDGTYGVVDYTNYDDMKYAVRNL 179
>gi|21954085|gb|AAK93589.2| putative SF2/ASF splicing modulator Srp30 protein [Arabidopsis
thaliana]
Length = 207
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/135 (75%), Positives = 115/135 (85%), Gaps = 2/135 (1%)
Query: 35 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 94
I GRDGY+FDG RLRVE+AHGGRR S S+DRYSS S SRRSDY VLVTGLP SA
Sbjct: 1 IYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAP-SRRSDYHVLVTGLPPSA 59
Query: 95 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 154
SWQDLKDHMR+AGDVCFS+VF DR GM+G+VDY++YDDMKYAIRKLD +EFRNAFS +Y+
Sbjct: 60 SWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYI 119
Query: 155 RVREYDSRRSYSRSP 169
RVREY+S RS SRSP
Sbjct: 120 RVREYES-RSVSRSP 133
>gi|449456443|ref|XP_004145959.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Cucumis sativus]
Length = 248
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/160 (63%), Positives = 118/160 (73%), Gaps = 8/160 (5%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DI+LKIPPRPP Y F+EFE RDAEDAIR RDGYNFDG RLRVELAHGGR SSS
Sbjct: 30 YGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSS 89
Query: 63 MDRYSSYSSGGSRGVSR--RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
DR SSY GG G DY ++ L +DHMR+AGDVCF++V RD G
Sbjct: 90 -DRRSSYGGGGGGGGQGFLLLDYVDMMNLLEXC-----FQDHMRKAGDVCFAEVSRDSEG 143
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
GIVDYT+YDDMKYAIRKLD +EFRN ++R+Y+RV++YD
Sbjct: 144 TFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYD 183
>gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa Japonica
Group]
Length = 145
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/118 (78%), Positives = 103/118 (87%), Gaps = 2/118 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLKIPPRPPGYAF+EFED RDA+DAI GR GY+FDG+RLRVELAHGGR S
Sbjct: 30 YGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGYDFDGHRLRVELAHGGR--GPS 87
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
DR SSYSS G RG ++R+DYRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ GG
Sbjct: 88 FDRSSSYSSAGRRGAAKRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGG 145
>gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 151
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/110 (80%), Positives = 97/110 (88%), Gaps = 2/110 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLKIPPRPPGYAF+EFED RDA+DAI GR GY+FDG+RLRVELAHGGR S
Sbjct: 30 YGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGYDFDGHRLRVELAHGGR--GPS 87
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
DR SSYSS G RG ++R+DYRV+VTGLPSSASWQDLKDHMRRAGDVCFS
Sbjct: 88 FDRSSSYSSAGRRGAAKRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFS 137
>gi|147788227|emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]
Length = 267
Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 138/205 (67%), Gaps = 18/205 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+D++LKIPPRPP Y F+EFE+ RDAEDAIRGRDGYNFDG RLRVELAHGGR SSS
Sbjct: 30 YGRILDVELKIPPRPPCYCFVEFENSRDAEDAIRGRDGYNFDGCRLRVELAHGGRGQSSS 89
Query: 63 MD--RYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
D GG GVSR S+YR G + DHMR+AGDVCF++V RD G
Sbjct: 90 SDRRGGHGSGGGGRFGVSRHSEYR----GAYEIGRYCWNLDHMRKAGDVCFAEVSRDADG 145
Query: 121 MTGIVDYTSYDDMKYA---------IRKLDRSEFRNAFSRSYVRVREYD---SRRSYSRS 168
G+VDYT+++DMKYA IRKLD +EFRN ++R+Y+RV+ YD RS S S
Sbjct: 146 TFGLVDYTNHEDMKYAQLTCSSLSQIRKLDDTEFRNPWARAYIRVKRYDVSPRSRSRSHS 205
Query: 169 PSRSPYYSRSRSRSPYYSRSRSPSR 193
PSRS R+RS+S S SRS S+
Sbjct: 206 PSRSRSLKRNRSKSLERSVSRSASK 230
>gi|52140007|gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'' [Zea mays]
Length = 150
Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 90/120 (75%), Positives = 101/120 (84%), Gaps = 2/120 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVDIDLK+PPRPPGYAF+EFED RDAE+AI GRDGYNFDG+RLRVE AHGGR ++SS
Sbjct: 30 YGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGYNFDGHRLRVEAAHGGRGNASS 89
Query: 63 MD--RYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
D G RGVSR S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 90 HDRSSGFGGGGGARRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGG 149
>gi|256092018|ref|XP_002581797.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 194
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 119/172 (69%), Gaps = 12/172 (6%)
Query: 3 YGPIVDIDLKIPPR-PPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
YGPI IDLK R P +AF+EFED DA DA+RGRDGYNFDGY LRVEL G
Sbjct: 33 YGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAVRGRDGYNFDGYALRVELPRTG----- 87
Query: 62 SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
+R + GG+ G SRRSD+RV+VTGLP + SWQDLKDHMR AGDV ++ VFRD
Sbjct: 88 VPERRFNRGGGGASGPSRRSDFRVIVTGLPPTGSWQDLKDHMREAGDVGYADVFRD---G 144
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRS 172
TG+V++ Y+DMKYAIR+LD S+FR + SY+RVRE R SRS SRS
Sbjct: 145 TGVVEFLRYEDMKYAIRRLDDSKFRSHEGESSYIRVRE--ERAGGSRSRSRS 194
>gi|307103808|gb|EFN52065.1| hypothetical protein CHLNCDRAFT_36976 [Chlorella variabilis]
Length = 302
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 105/156 (67%), Gaps = 5/156 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG +V ID+K P RPP +AF+EF D RDAEDA+RGRDGY+F G RLRVELA G
Sbjct: 33 YGKVVSIDMKAPVRPPAFAFVEFADPRDAEDAVRGRDGYDFYGNRLRVELAKGAGGRGRG 92
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R++ +RVLV GLP SASWQDLKDH+R+ ++ VFRDR G+T
Sbjct: 93 -----FGGGPPPGFRPRQTGFRVLVKGLPMSASWQDLKDHVRQVCKPAYTNVFRDRDGVT 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 158
G+V++ + DDM+ IRKLD +EFRN F R+YVRV E
Sbjct: 148 GVVEFETADDMERTIRKLDDTEFRNPFDRAYVRVVE 183
>gi|312088410|ref|XP_003145851.1| arginine/serine-rich splicing factor 3 [Loa loa]
gi|307758983|gb|EFO18217.1| arginine/serine-rich splicing factor 3 [Loa loa]
Length = 228
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 136/210 (64%), Gaps = 22/210 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG ++ +DLK R P +AF+EFED RDAEDA+RGRDGY+++GYRLRVE G
Sbjct: 28 YGKVLYVDLK-DRRQPYFAFVEFEDARDAEDAVRGRDGYDYEGYRLRVEFPRGLGPRGPG 86
Query: 63 MDRYSSYSSGGSRGVSR------------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
Y +G + +SR R++YRV+V+GLP+S SWQDLKDHMR AGDVC
Sbjct: 87 G---RPYDTGRNLSLSRNASGGGSSSGGRRANYRVIVSGLPASGSWQDLKDHMREAGDVC 143
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSP 169
++ V RD TGIV+Y Y+DMKYA+RKLD ++F+ + SY+RVRE D+ S + S
Sbjct: 144 YTDVLRD---GTGIVEYGRYEDMKYALRKLDDTKFKSHEGETSYIRVRE-DNGESRAHSR 199
Query: 170 SRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 199
SRSP SR SP YS S S S S S+SP
Sbjct: 200 SRSPVGRASRG-SPQYSPSYSNSGSHSHSP 228
>gi|302847745|ref|XP_002955406.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
gi|300259248|gb|EFJ43477.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
Length = 245
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 106/160 (66%), Gaps = 13/160 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +DLKI PRPP +AF+EFED RDA DA+RGRDG F G RLRVE++HG R
Sbjct: 22 YGRIRSVDLKIGPRPPAFAFVEFEDQRDAYDAVRGRDGIEFQGQRLRVEISHGRRGGFGG 81
Query: 63 MDRYSSYSSGGSR-------------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
G G SRR+DYRV+VTGLP S+SWQDLKDHMRRAG+V
Sbjct: 82 GGGGGGGGGYGGGGGGGYGGGGPNPYGPSRRTDYRVIVTGLPISSSWQDLKDHMRRAGEV 141
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 149
FSQV RD GM G++DY + +DM+ A+RKLD SEFRN +
Sbjct: 142 TFSQVMRDGRGMLGLIDYATREDMETALRKLDGSEFRNPY 181
>gi|301116808|ref|XP_002906132.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
gi|262107481|gb|EEY65533.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
Length = 297
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 111/157 (70%), Gaps = 7/157 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DID+K P RPP +AF++FED RDAEDAIRGRDGY++DG RLRVE A+GGRR S+
Sbjct: 27 YGRIRDIDVKFPSRPPAFAFVDFEDARDAEDAIRGRDGYDYDGARLRVEAANGGRRESA- 85
Query: 63 MDRYSSYSSGG-SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
R S+ S R + ++ V V+ LP SWQDLKD MR+AGDV F++V RGG
Sbjct: 86 --RDSARGSARYPRNIRGNGEFTVEVSNLPPRVSWQDLKDFMRKAGDVTFTEV-DGRGG- 141
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 158
G+V+Y++ DMKYA+ KLD +EFR SYVRVR+
Sbjct: 142 -GVVEYSNKRDMKYAVEKLDDTEFRGRSENSYVRVRQ 177
>gi|170588713|ref|XP_001899118.1| SF2 [Brugia malayi]
gi|158593331|gb|EDP31926.1| SF2, putative [Brugia malayi]
Length = 228
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 136/207 (65%), Gaps = 16/207 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG ++ +DLK R P +AF+EFED RDAEDA+RGRDGY+++GYRLRVE G
Sbjct: 28 YGRVLYVDLK-DRRQPYFAFVEFEDARDAEDAVRGRDGYDYEGYRLRVEFPRGLGPRGPG 86
Query: 63 MDRYSS---------YSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 113
Y S GGS SRR++YRV+V+GLP+S SWQDLKDHMR AGDVC++
Sbjct: 87 GRPYDSGRNLSVSRSAGGGGSSSGSRRANYRVIVSGLPASGSWQDLKDHMREAGDVCYTD 146
Query: 114 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRS 172
V RD TGIV+Y Y+DMKYA+RKLD ++F+ + SY+RV+E D+ S + S SRS
Sbjct: 147 VLRD---GTGIVEYGRYEDMKYALRKLDDTKFKSHEGETSYIRVKE-DNGESRAHSRSRS 202
Query: 173 PYYSRSRSRSPYYSRSRSPSRSWSYSP 199
P SR SP YS S S S S S+SP
Sbjct: 203 PVGRASRG-SPQYSPSYSNSGSHSHSP 228
>gi|66548276|ref|XP_393525.2| PREDICTED: serine/arginine-rich splicing factor 1-like [Apis
mellifera]
Length = 248
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 133/219 (60%), Gaps = 35/219 (15%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G ++ +DLK PP +AF+EF+D RDAEDA+ RDGY++DGYRLRVE GG ++
Sbjct: 32 FGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGGGPSNNF 90
Query: 63 MDRYSSYSSG-GSRGV----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
+ SG G RG +RRS YRVLVTGLP S SWQDLKDHMR AGDVCF
Sbjct: 91 RGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVTGLPPSGSWQDLKDHMREAGDVCF 150
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPS 170
+ VF+D TG+V++ Y+DMKYA++KLD S FR + +Y+RV+E
Sbjct: 151 ADVFKD---GTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEVAYIRVKE------------ 195
Query: 171 RSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSR---SYSP 206
+ S R RS R RS SR SYSPR R +YSP
Sbjct: 196 --DHNSGDRGRSEDRERGRSHSR--SYSPRRRGSPTYSP 230
>gi|383848005|ref|XP_003699643.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Megachile
rotundata]
Length = 248
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 123/193 (63%), Gaps = 16/193 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G ++ +DLK PP +AF+EF+D RDAEDA+ RDGY++DGYRLRVE GG ++
Sbjct: 32 FGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGGGPSNNF 90
Query: 63 MDRYSSYSSG-GSRGV----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
+ SG G RG +RRS YRVLVTGLP S SWQDLKDHMR AGDVCF
Sbjct: 91 RGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVTGLPPSGSWQDLKDHMREAGDVCF 150
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPS 170
+ V++D TG+V++ Y+DMKYA++KLD S FR + +Y+RV+E S RS
Sbjct: 151 ADVYKD---GTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEVAYIRVKEDHSSGDRGRSED 207
Query: 171 RSPYYSRSRSRSP 183
R S SRS SP
Sbjct: 208 RERGRSHSRSYSP 220
>gi|340726341|ref|XP_003401518.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
terrestris]
gi|350423930|ref|XP_003493634.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
impatiens]
Length = 248
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 133/219 (60%), Gaps = 35/219 (15%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G ++ +DLK PP +AF+EF+D RDAEDA+ RDGY++DGYRLRVE GG ++
Sbjct: 32 FGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGGGPSNNF 90
Query: 63 MDRYSSYSSG-GSRGV----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
+ SG G RG +RRS YRVLVTGLP S SWQDLKDHMR AGDVCF
Sbjct: 91 RGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVTGLPPSGSWQDLKDHMREAGDVCF 150
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPS 170
+ V++D TG+V++ Y+DMKYA++KLD S FR + +Y+RV+E
Sbjct: 151 ADVYKD---GTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEVAYIRVKE------------ 195
Query: 171 RSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSR---SYSP 206
+ S R RS R RS SR SYSPR R +YSP
Sbjct: 196 --DHNSGDRGRSEDRERGRSHSR--SYSPRRRGSPTYSP 230
>gi|325190523|emb|CCA25022.1| premRNAsplicing factor SF2 putative [Albugo laibachii Nc14]
Length = 303
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 108/157 (68%), Gaps = 13/157 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I DIDLK+P RPP YAF++FED RDAEDAI RDGY ++G RLRVE R + +
Sbjct: 26 HGKIQDIDLKLPLRPPAYAFIDFEDARDAEDAIEARDGYKYEGQRLRVE-----RANPKN 80
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+++ S+G + V VT LPS SWQDLKD MR+AG+V F+++ D+ G
Sbjct: 81 IEKEKHVRGSRSKGSN-----TVKVTNLPSRVSWQDLKDFMRKAGEVTFAKI--DKHG-D 132
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 159
GIVD+ +DDMKYAI++LD ++FRN F R+YVRV++
Sbjct: 133 GIVDFKHHDDMKYAIKRLDDTKFRNRFDRAYVRVKQL 169
>gi|350646485|emb|CCD58884.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 207
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 109/158 (68%), Gaps = 14/158 (8%)
Query: 3 YGPIVDIDLKIPPR-PPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
YGPI IDLK R P +AF+EFED DA DA+RGRDGYNFDGY LRVEL G +
Sbjct: 29 YGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAVRGRDGYNFDGYALRVELPRTGGFNRG 88
Query: 62 SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
G+ G SRRSD+RV+VTGLP + SWQDLKDHMR AGDV ++ VFRD
Sbjct: 89 GG---------GASGPSRRSDFRVIVTGLPPTGSWQDLKDHMREAGDVGYADVFRD---G 136
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
TG+V++ Y+DMKYAIR+LD S+FR + SY+RVRE
Sbjct: 137 TGVVEFLRYEDMKYAIRRLDDSKFRSHEGESSYIRVRE 174
>gi|157113456|ref|XP_001657837.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108877724|gb|EAT41949.1| AAEL006473-PA [Aedes aegypti]
Length = 237
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 117/165 (70%), Gaps = 13/165 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR--RHS 60
+G + +DLK PP +AF+EFED RDA+DA++ RDGY++DGYRLRVE GG R+S
Sbjct: 31 FGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGGGPGRYS 89
Query: 61 SSMDRYSSYSSGGSRG------VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
SS +S GG+R +RRS +RV+VTGLP+S SWQDLKDHMR AGDVCF+ V
Sbjct: 90 SSSRGGNSDRGGGARDRGNRGPPARRSQFRVMVTGLPASGSWQDLKDHMREAGDVCFADV 149
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
++D TG+V++ ++DMKYAI+KLD S FR + +Y+RVRE
Sbjct: 150 YKD---GTGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 191
>gi|348687956|gb|EGZ27770.1| hypothetical protein PHYSODRAFT_246920 [Phytophthora sojae]
Length = 838
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 108/157 (68%), Gaps = 12/157 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
YG I DID+K P RPP +AF++FED RDAEDAIRGRDGY++DG RLRVE A+GGRR S+
Sbjct: 554 YGRIRDIDVKFPSRPPAFAFVDFEDPRDAEDAIRGRDGYDYDGARLRVEPANGGRRESAP 613
Query: 62 -SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
RY R + DY V ++ LP SWQDLKD MR+AGDV F++V RGG
Sbjct: 614 RGSGRY-------PRNIRGTGDYTVEISNLPPRVSWQDLKDFMRKAGDVVFTEV-DGRGG 665
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 157
GIV+Y++ DMKYA+ KLD SEFR SYVRVR
Sbjct: 666 --GIVEYSNKRDMKYAVEKLDDSEFRGRSENSYVRVR 700
>gi|380024306|ref|XP_003695942.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Apis florea]
Length = 248
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 132/219 (60%), Gaps = 35/219 (15%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G ++ +DLK PP +AF+EF+D RDAEDA+ RDGY++DGYRLRVE GG ++
Sbjct: 32 FGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGGGPSNNF 90
Query: 63 MDRYSSYSSG-GSRGV----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
+ SG G RG +RRS YRVLVTGLP S SWQDLKDHMR AGDVCF
Sbjct: 91 RGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVTGLPPSGSWQDLKDHMREAGDVCF 150
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPS 170
+ VF+D TG+V++ Y+DMKYA++K D S FR + +Y+RV+E
Sbjct: 151 ADVFKD---GTGVVEFLRYEDMKYAVKKXDDSRFRSHEGEVAYIRVKE------------ 195
Query: 171 RSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSR---SYSP 206
+ S R RS R RS SR SYSPR R +YSP
Sbjct: 196 --DHNSGDRGRSEDRERGRSHSR--SYSPRRRGSPTYSP 230
>gi|357631525|gb|EHJ78995.1| hypothetical protein KGM_15683 [Danaus plexippus]
Length = 249
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 130/203 (64%), Gaps = 19/203 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL----AHGGRR 58
+G + +DLK PP +AF+EFED RDA+DA+R RDGY++DGYRLRVE G R
Sbjct: 35 FGKVTFVDLKNRKGPP-FAFVEFEDPRDADDAVRARDGYDYDGYRLRVEFPRGGGGGARG 93
Query: 59 HSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
S DR+ + +RG +RRS+YRVLVTGLP S SWQDLKDHMR AGDVCF+ F+D
Sbjct: 94 GRSQPDRFGPRPA--ARGPPARRSEYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD 151
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYS 176
TG+V++ ++DMKYA++KLD S FR + SY+RV+E RSP Y
Sbjct: 152 ---GTGVVEFLRHEDMKYAVKKLDDSRFRSHEGEVSYIRVKEDYGSGGGGGLRDRSPEY- 207
Query: 177 RSRSRSPYYSRSRSPSRSWSYSP 199
++ SP Y+R SP SYSP
Sbjct: 208 --QAGSPSYTRRGSP----SYSP 224
>gi|427777641|gb|JAA54272.1| Putative sf2 [Rhipicephalus pulchellus]
Length = 223
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 109/158 (68%), Gaps = 12/158 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I IDLK PP +AF+EF+D RDAEDA++ RDGY++DGYRLRVE G S
Sbjct: 31 FGKITFIDLKNRRGPP-FAFVEFDDPRDAEDAVQARDGYDYDGYRLRVEFPRGSAPGRGS 89
Query: 63 MDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
M G RG +RRS YRVLV+GLP S SWQDLKDHMR AGDVC++ VF+D
Sbjct: 90 M------GPGRGRGPPARRSQYRVLVSGLPPSGSWQDLKDHMREAGDVCYADVFKD---G 140
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
TG+V++ Y+DMKYA++KLD S FR + SY+RVRE
Sbjct: 141 TGVVEFLRYEDMKYAVKKLDDSRFRSHEGEVSYIRVRE 178
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 135/226 (59%), Gaps = 17/226 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS-- 60
+G + +DLK PP +AF+EFED RDA+DA++ RDGY++DGYRLRVE GG S
Sbjct: 31 FGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGGGPGSYR 89
Query: 61 ----SSMDRYSSYSSGGSRG-VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
+ DR S +RG +RRS +RV+VTGLPSS SWQDLKDHMR AGDVCF+ V+
Sbjct: 90 GSRQGNSDRNSRGGDRNNRGPPARRSQFRVMVTGLPSSGSWQDLKDHMREAGDVCFADVY 149
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYY 175
+D TG+V++ ++DMKYAI+KLD S FR+ V + R
Sbjct: 150 KD---GTGVVEFLRHEDMKYAIKKLDDSRFRS----HEVSKKTRGEREREREKERGRERE 202
Query: 176 SRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 221
S + R+ + S + SPR++SYSPR + R SP+ SP +
Sbjct: 203 SSTCERANFIPIPIFYILSQTMSPRAKSYSPRRR--RGSPTYSPVQ 246
>gi|402587972|gb|EJW81906.1| splicing factor [Wuchereria bancrofti]
Length = 228
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 135/207 (65%), Gaps = 16/207 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG ++ +DLK R P +AF+EFED RDAEDA+RGRDGY+++GYRLRVE G
Sbjct: 28 YGRVLYVDLK-DRRQPYFAFVEFEDARDAEDAVRGRDGYDYEGYRLRVEFPRGLGPRGPG 86
Query: 63 MDRYSS---------YSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 113
Y S GGS SRR+ YRV+V+GLP+S SWQDLKDHMR AGDVC++
Sbjct: 87 GRPYDSGRNLSVSRSACGGGSSSGSRRASYRVIVSGLPASGSWQDLKDHMREAGDVCYTD 146
Query: 114 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRS 172
V RD TGIV+Y Y+DMKYA+RKLD ++F+ + SY+RV+E D+ S + S SRS
Sbjct: 147 VLRD---GTGIVEYGRYEDMKYALRKLDDTKFKSHEGETSYIRVKE-DNGESRAHSRSRS 202
Query: 173 PYYSRSRSRSPYYSRSRSPSRSWSYSP 199
P SR SP YS S S S S S+SP
Sbjct: 203 PVGRASRG-SPQYSPSYSNSGSHSHSP 228
>gi|289739445|gb|ADD18470.1| alternative splicing factor ASF/SF2 [Glossina morsitans morsitans]
Length = 236
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 111/165 (67%), Gaps = 13/165 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G + +DLK PP +AF+EFED RDA+DA++ RDGY++DGYRLRVE GG R+
Sbjct: 30 FGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGGGRNEHR 88
Query: 63 MDRYSSYSSGGSRGV--------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
+R + + G ++RS YRVLVTGLPSS SWQDLKDHMR AGDVCF+
Sbjct: 89 NNRGNERGNQREGGRGGGGRGPPTKRSQYRVLVTGLPSSGSWQDLKDHMREAGDVCFADT 148
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
++D TG+V++ ++DMKYAI+KLD S FR + Y+RVRE
Sbjct: 149 YKD---GTGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVGYIRVRE 190
>gi|346471975|gb|AEO35832.1| hypothetical protein [Amblyomma maculatum]
Length = 223
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 108/158 (68%), Gaps = 12/158 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I IDLK PP +AF+EF+D RDAEDA+ RDGY++DGYRLRVE G S
Sbjct: 31 FGKITFIDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGSAPGRGS 89
Query: 63 MDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
M G RG +RRS YRVLV+GLP S SWQDLKDHMR AGDVC++ VF+D
Sbjct: 90 M------GPGRGRGPPARRSQYRVLVSGLPPSGSWQDLKDHMREAGDVCYADVFKD---G 140
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
TG+V++ Y+DMKYA++KLD S FR + SY+RVRE
Sbjct: 141 TGVVEFLRYEDMKYAVKKLDDSRFRSHEGEVSYIRVRE 178
>gi|325303176|tpg|DAA34416.1| TPA_inf: alternative splicing factor ASF/SF2 [Amblyomma variegatum]
Length = 222
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 108/158 (68%), Gaps = 12/158 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I IDLK PP +AF+EF+D RDAEDA+ RDGY++DGYRLRVE G S
Sbjct: 31 FGKITFIDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGSAPGRGS 89
Query: 63 MDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
M G RG +RRS YRVLV+GLP S SWQDLKDHMR AGDVC++ VF+D
Sbjct: 90 M------GPGRGRGPPARRSQYRVLVSGLPPSGSWQDLKDHMREAGDVCYADVFKD---G 140
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
TG+V++ Y+DMKYA++KLD S FR + SY+RVRE
Sbjct: 141 TGVVEFLRYEDMKYAVKKLDDSRFRSHEGEVSYIRVRE 178
>gi|358336433|dbj|GAA54942.1| splicing factor arginine/serine-rich 1/9 [Clonorchis sinensis]
Length = 251
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 115/171 (67%), Gaps = 28/171 (16%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGPI +IDLK PP +AF+EFED DA DA+RGRDGYNFDGY LRVE GG
Sbjct: 29 YGPIAEIDLKSRRGPP-FAFIEFEDELDAADAVRGRDGYNFDGYALRVEFPRGGT----- 82
Query: 63 MDRYSSYS-SGGS-------------RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGD 108
+SY+ SGG+ G SRRSD+RV+VTGLP + SWQDLKDHMR AGD
Sbjct: 83 ----ASYNGSGGNFNSFRRGGFGRGGGGPSRRSDFRVVVTGLPPTGSWQDLKDHMREAGD 138
Query: 109 VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
V ++ VFRD TG+V++ Y+DMKYA+RKLD S+FR + SY+RVRE
Sbjct: 139 VGYADVFRDG---TGVVEFLRYEDMKYAVRKLDDSKFRSHEGESSYIRVRE 186
>gi|156545752|ref|XP_001605411.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Nasonia
vitripennis]
Length = 257
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 111/165 (67%), Gaps = 13/165 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
+G + +DLK PP +AF+EF+D RDAEDA+ RDGY++DGYRLRVE GG SS
Sbjct: 43 FGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGGGPSSSF 101
Query: 62 ----SMDRYSSYSSGGSRG---VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
D G SRG +RRS YRVLVTGLP S SWQDLKDHMR AGDVCF+ V
Sbjct: 102 RGRGGGDSRGRGDMGNSRGRGPPARRSQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADV 161
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
++D TG+V++ Y+DMKYA++KLD S FR + +Y+RV+E
Sbjct: 162 YKD---GTGVVEFLRYEDMKYAVKKLDDSRFRSHEGEVAYIRVKE 203
>gi|324504398|gb|ADY41900.1| Serine/arginine-rich splicing factor 1 [Ascaris suum]
Length = 233
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 131/212 (61%), Gaps = 22/212 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL---------- 52
+G ++ +DLK RPP +AF+EFED RDAEDA+R RDGY+F GYRLRVE
Sbjct: 28 FGKVLFVDLK-DKRPPYFAFVEFEDPRDAEDAVRSRDGYDFYGYRLRVEFPRGVGPRGPG 86
Query: 53 ---AHGGRR--HSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG 107
HG R S D GSR RR++YRV+VTGLP+S SWQDLKDHMR AG
Sbjct: 87 GRPLHGNDRGYSGSRGDGGYGGGGSGSRSGGRRTNYRVIVTGLPTSGSWQDLKDHMREAG 146
Query: 108 DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYS 166
DVC++ + RD TG+V+Y DDMKYAIRKLD ++F+ + +Y+RVRE D
Sbjct: 147 DVCYADITRD---GTGVVEYARLDDMKYAIRKLDDTKFKSHEGETAYIRVRE-DDINGGG 202
Query: 167 RSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS 198
RS SRSP +R+ SP YS SRS S S
Sbjct: 203 RSRSRSP-MARATRGSPQYSPKGGRSRSRSTS 233
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 112/160 (70%), Gaps = 17/160 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I IDLK PP +AF+EFED RDAEDA+ RDGY++DGY+LRVE G +S+
Sbjct: 30 YGKITFIDLKNRRGPP-FAFVEFEDPRDAEDAVSARDGYDYDGYKLRVEFPRG----NSA 84
Query: 63 MDRYSSYSSGGSRG---VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
R G SRG +RRS YRV+VTGLP + SWQDLKDHMR AGDVC++ V++D
Sbjct: 85 RPR-----GGPSRGRGPPARRSQYRVIVTGLPPTGSWQDLKDHMREAGDVCYADVYKD-- 137
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SYVRVRE 158
TG+V++ Y+DMKYA++KLD S FR+ S SYVRV+E
Sbjct: 138 -GTGVVEFLRYEDMKYAVKKLDDSRFRSHESEVSYVRVKE 176
>gi|82233969|sp|Q5ZML3.3|SRSF1_CHICK RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|53127294|emb|CAG31030.1| hypothetical protein RCJMB04_1l5 [Gallus gallus]
Length = 257
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 116/183 (63%), Gaps = 15/183 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--- 155
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
TG+V++ +DM YA+RKLD ++FR + +Y+RV+ RSP Y RSR
Sbjct: 156 GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK---------VDGPRSPSYGRSR 206
Query: 180 SRS 182
SRS
Sbjct: 207 SRS 209
>gi|260833612|ref|XP_002611806.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
gi|229297178|gb|EEN67815.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
Length = 175
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 102/147 (69%), Gaps = 7/147 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+ +DLKI PP +AF+EFED RDA+DA+ GRDGY DGYRLRVE G R
Sbjct: 29 YGKIIHVDLKIGRGPP-FAFVEFEDKRDADDAVYGRDGYTLDGYRLRVEFPRGSARGGYG 87
Query: 63 MDRYSSYSSGGSRGV---SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
GG+R SRRS+YRVLV+GLP + SWQDLKDHMR AGDVCF+ VFRD
Sbjct: 88 RSGGGGGGGGGARRGGAPSRRSEYRVLVSGLPPTGSWQDLKDHMREAGDVCFADVFRDG- 146
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR 146
TG+V++ YDDMKYA++ LD S+FR
Sbjct: 147 --TGVVEFLRYDDMKYAVKHLDDSKFR 171
>gi|170045710|ref|XP_001850441.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
gi|167868651|gb|EDS32034.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
Length = 241
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 122/200 (61%), Gaps = 21/200 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGG------ 56
+G + +DLK PP +AF+EFED RDA+DA++ RDGY++DGYRLRVE GG
Sbjct: 31 FGKVTFVDLKNRRGPP-FAFVEFEDNRDADDAVKARDGYDYDGYRLRVEFPRGGGPGSYR 89
Query: 57 -----RRHSSSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
G +RG +RRS +RV+VTGLP+S SWQDLKDHMR AGDVC
Sbjct: 90 GSRGSTSGDRGGGSSGRDRGGNNRGPPARRSQFRVVVTGLPASGSWQDLKDHMREAGDVC 149
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE---YDSRRSYS 166
F+ V++D TG+V+Y ++DMKYAI+KLD S FR + +Y+RVRE D RR
Sbjct: 150 FADVYKD---GTGVVEYLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGNDDRRGGG 206
Query: 167 RSPSRSPYYSRSRSRSPYYS 186
RS Y R R +P YS
Sbjct: 207 EHRDRS-YSPRRRRGTPTYS 225
>gi|332027470|gb|EGI67553.1| Splicing factor, arginine/serine-rich 1 [Acromyrmex echinatior]
Length = 248
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 116/182 (63%), Gaps = 16/182 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G + +DLK PP +AF+EF+D RDAEDA+ RDGY++DGYRLRVE GG ++
Sbjct: 32 FGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGGGPSNNF 90
Query: 63 MDRYSSYSSG-GSRGV----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
+ SG G RG +RRS YRVLV+GLP S SWQDLKDHMR AGDVCF
Sbjct: 91 RGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVSGLPPSGSWQDLKDHMREAGDVCF 150
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPS 170
+ V++D TG+V++ +DDMKYA++KLD S FR + +Y+RV+E S RS
Sbjct: 151 ADVYKD---GTGVVEFLRHDDMKYAVKKLDDSRFRSHEGEVAYIRVKEDHSGGDRGRSED 207
Query: 171 RS 172
R
Sbjct: 208 RE 209
>gi|291228498|ref|XP_002734207.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 230
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 109/158 (68%), Gaps = 6/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLK PP ++F+EFED RDAEDA+RGRDGY++DGYRLRVE GG
Sbjct: 37 YGNILDIDLKNRRGPP-FSFVEFEDKRDAEDAVRGRDGYDYDGYRLRVEFPRGGGGGGGG 95
Query: 63 MDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
G G +RRS+YR LV+GLP + SWQDLKDHMR AGDVCF+ V+RD
Sbjct: 96 GGGLGGGPGRGRGGPPARRSEYRCLVSGLPPTGSWQDLKDHMREAGDVCFADVYRDG--- 152
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
TG+V++ Y+DMKYA + LD ++FR + SY+RV+E
Sbjct: 153 TGVVEFLRYEDMKYAAKHLDDTKFRSHEGETSYIRVKE 190
>gi|260833614|ref|XP_002611807.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
gi|229297179|gb|EEN67816.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
Length = 177
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 102/144 (70%), Gaps = 11/144 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I IDLK PP +AF+EF+D RDAEDA+RGRDGYN+DGYRLRVE G R
Sbjct: 31 YGNIRHIDLKNKRGPP-FAFVEFDDKRDAEDAVRGRDGYNYDGYRLRVEFPRGTSRGGYR 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R S RRS+YRVLV+GLP + SWQDLKDHMR AGDVC++ VFRD T
Sbjct: 90 GGRRVGQPS-------RRSEYRVLVSGLPPTGSWQDLKDHMREAGDVCYADVFRDG---T 139
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
G+V++ +Y+DMKYA+++LD S+FR
Sbjct: 140 GVVEFLNYEDMKYAVKQLDDSKFR 163
>gi|428183363|gb|EKX52221.1| hypothetical protein GUITHDRAFT_41825, partial [Guillardia theta
CCMP2712]
Length = 195
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 104/156 (66%), Gaps = 11/156 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG-GRRHSS 61
YG I DI++K P RPP +AF+ FEDYRDAEDAIRGRDG +F+G RLR E++ G G R S
Sbjct: 22 YGRIRDIEVKTPNRPPAFAFVSFEDYRDAEDAIRGRDGISFEGARLRCEMSRGNGPRGSR 81
Query: 62 SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
R RRSDYRV+V+ LP SASWQDLKDH R+ G+V ++ V R
Sbjct: 82 QQPRRDL----------RRSDYRVIVSNLPPSASWQDLKDHFRQVGEVVYTDVDRSLKSS 131
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 157
GIV++ S + + AI++LD +EF+N F + Y+RV+
Sbjct: 132 GGIVEFASRSEQEAAIKQLDDTEFKNPFDKVYIRVK 167
>gi|348518702|ref|XP_003446870.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 243
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 107/160 (66%), Gaps = 11/160 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE R
Sbjct: 39 YGIIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFP---RSGRGG 95
Query: 63 MDRYSSYSSGGSRG----VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
+ G RG SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 96 GRGGGGGALGTPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVYRD- 154
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG+V++ +DM YAIRKLD ++FR + +Y+RV+
Sbjct: 155 --GTGVVEFVRKEDMTYAIRKLDNTKFRSHEGETAYIRVK 192
>gi|156394189|ref|XP_001636709.1| predicted protein [Nematostella vectensis]
gi|156223814|gb|EDO44646.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 105/161 (65%), Gaps = 30/161 (18%)
Query: 3 YGPIVDIDLKI-----PPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR 57
YG I D+DLK PP +AF+EFED RDAEDA++GRDG+ FDGYR+RVE
Sbjct: 32 YGHIADVDLKNRRGAGPP----FAFVEFEDPRDAEDAVKGRDGHEFDGYRIRVE------ 81
Query: 58 RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
+ GGS RRSD+RV V+GLP + SWQDLKDHMR AGDV F+ VF+D
Sbjct: 82 -----------FPRGGSGPPPRRSDFRVQVSGLPPTGSWQDLKDHMREAGDVLFTDVFKD 130
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG+V++ YDDMK+AIR LD S+FR + SY+RV+
Sbjct: 131 ---GTGVVEFARYDDMKFAIRNLDDSKFRSHEGETSYIRVK 168
>gi|307203784|gb|EFN82720.1| Splicing factor, arginine/serine-rich 1 [Harpegnathos saltator]
Length = 193
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 104/155 (67%), Gaps = 15/155 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G + +DLK PP +AF+EF+D RDAEDA+ RDGY++DGYRLRVE GG ++
Sbjct: 32 FGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGGGPSNNF 90
Query: 63 MDRYSSYSSG-GSRGV----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
+ SG G RG +RRS YRVLVTGLP S SWQDLKDHMR AGDVCF
Sbjct: 91 RGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVTGLPPSGSWQDLKDHMREAGDVCF 150
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 146
+ V++D TG+V++ +DDMKYA++KLD S FR
Sbjct: 151 ADVYKD---GTGVVEFLRHDDMKYAVKKLDDSRFR 182
>gi|56758822|gb|AAW27551.1| SJCHGC05822 protein [Schistosoma japonicum]
gi|226469552|emb|CAX76606.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469554|emb|CAX76607.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469556|emb|CAX76608.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469558|emb|CAX76609.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469560|emb|CAX76610.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469562|emb|CAX76611.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469564|emb|CAX76612.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472960|emb|CAX71166.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472964|emb|CAX71168.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472966|emb|CAX71169.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 225
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 112/167 (67%), Gaps = 14/167 (8%)
Query: 3 YGPIVDIDLKIPPR-PPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGG----- 56
YGPI IDLK R P +AF+EFED DA DA+RGRDGYNFDGY LRVEL G
Sbjct: 29 YGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAVRGRDGYNFDGYALRVELPRTGSYNNG 88
Query: 57 ----RRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
+ ++ GGS G SRRSD+RV+VTGLP + SWQDLKDHMR AGDV ++
Sbjct: 89 NGGPNNNQFRRGGFNRGGGGGSSGPSRRSDFRVIVTGLPPTGSWQDLKDHMREAGDVGYA 148
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
VFRD TG+V++ Y+DMKYAIR+LD S+FR + SY+RVRE
Sbjct: 149 DVFRD---GTGVVEFLRYEDMKYAIRRLDDSKFRSHEGESSYIRVRE 192
>gi|194744791|ref|XP_001954876.1| GF16525 [Drosophila ananassae]
gi|190627913|gb|EDV43437.1| GF16525 [Drosophila ananassae]
Length = 253
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 110/161 (68%), Gaps = 9/161 (5%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G + +DLK PP +AF+EFED RDA+DA++ RDGY++DGYRLRVE GG S
Sbjct: 30 FGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGGGPGSYR 88
Query: 63 MDRYSSYSSGGSRGV----SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
+R GG G ++RS YRV+VTGLP S SWQDLKDHMR AGDVCF+ ++D
Sbjct: 89 GNRNDRSRDGGRMGGRGPPAKRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYKD- 147
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
+G+V++ ++DMKYAI+KLD S FR + +Y+RVRE
Sbjct: 148 --GSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 186
>gi|299469752|emb|CBN76606.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 330
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 106/166 (63%), Gaps = 15/166 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR----- 57
+G IVDIDLK P RPP + F+ F+D RDAE+A+R RDGY+ DG RLRVE++ G R
Sbjct: 25 FGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRDPFGM 84
Query: 58 -------RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
R M G ++++YRV+VTGLP SASWQDLKDHMR+AG+
Sbjct: 85 GGGGHGGRMGMPMGGGRGGFGGRGGAGFQQTEYRVIVTGLPPSASWQDLKDHMRKAGEPT 144
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 156
++ V +GG GIV + + DDM YA+RKLD S+FRN F +S + V
Sbjct: 145 YTDVDH-KGG--GIVHFRTRDDMDYALRKLDGSDFRNPFEKSRISV 187
>gi|410910210|ref|XP_003968583.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
gi|47227796|emb|CAG08959.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 105/156 (67%), Gaps = 4/156 (2%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDA+DA+ GRDGY++DGYRLRVE GR
Sbjct: 37 YGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGSRGG 96
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
G SRRS+YRVLV+GLP S SWQDLKDHMR AGDVC++ V+RD T
Sbjct: 97 FGGIGGAPRGRYGPPSRRSEYRVLVSGLPQSGSWQDLKDHMREAGDVCYADVYRD---GT 153
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
G+V++ +DM YA+RKLD ++FR + +Y++V+
Sbjct: 154 GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIQVK 189
>gi|432889874|ref|XP_004075374.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 245
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 105/156 (67%), Gaps = 4/156 (2%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDA+DA+ GRDGY++DGYRLRVE GR
Sbjct: 37 YGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGSRGG 96
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
G SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ V+RD T
Sbjct: 97 FGGIGGAPRGRYGPPSRRSEYRVVVSGLPQSGSWQDLKDHMREAGDVCYADVYRD---GT 153
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
G+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 154 GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 189
>gi|312074319|ref|XP_003139917.1| arginine/serine-rich splicing factor 1B [Loa loa]
gi|307764919|gb|EFO24153.1| arginine/serine-rich splicing factor 1B [Loa loa]
Length = 266
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/256 (41%), Positives = 143/256 (55%), Gaps = 34/256 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ID+K P +AF+EF+D RDA DA+ GRDGY+FDG R+RVEL G
Sbjct: 30 YGRINFIDIKFTRDVP-FAFVEFDDPRDARDAVHGRDGYDFDGCRIRVELTRGVGPRGPG 88
Query: 63 MDRYSSYSSGGSRG--VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
R RRS YRV+++GLP + SWQDLKDHMR AG++C++ VFRD
Sbjct: 89 GRPLYGPDPRSPRHGPPPRRSGYRVVISGLPDTGSWQDLKDHMRDAGEICYADVFRD--- 145
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
TG+V+YT+Y+DMKYA+RKLD ++F+ + +Y+RVRE + SP SRSR
Sbjct: 146 GTGVVEYTNYEDMKYALRKLDDTKFKSHEGEVTYIRVREAN---------INSPNRSRSR 196
Query: 180 SRSPYYSRSRSPSRSWSYSP-----------RSRSYSPRGKYSRRSPSLSPARSASQRSP 228
S +P +RS S YSP + RR S+SP S+ RSP
Sbjct: 197 SYTPRKTRS-----SPKYSPIRSVSRSRSRSSRSRSHSHASFVRR--SVSPVNSSHSRSP 249
Query: 229 SGSPPRSFSRSGSFAR 244
S + ++ RS S +R
Sbjct: 250 SRTRSKTCPRSRSESR 265
>gi|241849002|ref|XP_002415663.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215509877|gb|EEC19330.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 223
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 106/157 (67%), Gaps = 10/157 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I IDLK PP +AF+EFED RDAEDA RDGY++DGYRLRVE G S+
Sbjct: 31 FGKITFIDLKNRRGPP-FAFVEFEDPRDAEDAAHARDGYDYDGYRLRVEFPRG-----SA 84
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G +RRS YRVLV+GLP S SWQDLKDHMR AGDVC++ VF+D T
Sbjct: 85 PGRGGMGPGRGRGPPARRSQYRVLVSGLPPSGSWQDLKDHMREAGDVCYADVFKD---GT 141
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
G+V++ Y+DMKYA++KLD S FR + SY+RVRE
Sbjct: 142 GVVEFLRYEDMKYAVKKLDDSRFRSHEGEVSYIRVRE 178
>gi|195038647|ref|XP_001990768.1| GH18077 [Drosophila grimshawi]
gi|193894964|gb|EDV93830.1| GH18077 [Drosophila grimshawi]
Length = 252
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 109/163 (66%), Gaps = 11/163 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR----R 58
+G + +DLK PP +AF+EFED RDA+DA++ RDGY++DGYRLRVE GG R
Sbjct: 30 FGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGGGPGSYR 88
Query: 59 HSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
++ DR ++RS YRV+VTGLP S SWQDLKDHMR AGDVCF+ ++
Sbjct: 89 GNNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYK 148
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
D +G+V++ ++DMKYAI+KLD S FR + +Y+RVRE
Sbjct: 149 D---GSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 188
>gi|432113649|gb|ELK35931.1| Vascular endothelial zinc finger 1 [Myotis davidii]
Length = 688
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 98/146 (67%), Gaps = 5/146 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 156
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
TG+V++ +DM YA+RKLD ++FR
Sbjct: 157 -TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|172046470|emb|CAQ34907.1| ASF/SF2 protein [Chironomus tentans]
Length = 246
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 111/163 (68%), Gaps = 11/163 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGG------ 56
+G + +DLK PP + F+EFED+RDA DA++ R Y++DGY+LRVE GG
Sbjct: 32 FGKVSFVDLKNRRGPP-FVFVEFEDHRDASDAVKARSNYDYDGYKLRVEFPRGGGPGSSY 90
Query: 57 RRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
R S++ S G +R +RRS YRVLV+GLPSS SWQDLKDHMR AGDVCF+ V++
Sbjct: 91 RGRSNNDRGGSGRGGGNNRPAARRSQYRVLVSGLPSSGSWQDLKDHMREAGDVCFADVYK 150
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
D TG+V++ Y+DMKYAI+KLD S FR + +Y+R++E
Sbjct: 151 D---GTGVVEFLRYEDMKYAIKKLDDSRFRSHEGEVAYIRIKE 190
>gi|322789865|gb|EFZ15012.1| hypothetical protein SINV_14247 [Solenopsis invicta]
Length = 186
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 104/155 (67%), Gaps = 15/155 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G + +DLK PP +AF+EF+D RDAEDA+ RDGY++DGYRLRVE GG ++
Sbjct: 33 FGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGGGPSNNF 91
Query: 63 MDRYSSYSSG-GSRGV----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
+ SG G RG +RRS YRVLV+GLP S SWQDLKDHMR AGDVCF
Sbjct: 92 RGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVSGLPPSGSWQDLKDHMREAGDVCF 151
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 146
+ V++D TG+V++ +DDMKYA++KLD S FR
Sbjct: 152 ADVYKD---GTGVVEFLRHDDMKYAVKKLDDSRFR 183
>gi|195152782|ref|XP_002017315.1| GL22249 [Drosophila persimilis]
gi|198454070|ref|XP_001359460.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
gi|194112372|gb|EDW34415.1| GL22249 [Drosophila persimilis]
gi|198132637|gb|EAL28606.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
Length = 263
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 109/163 (66%), Gaps = 11/163 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G + +DLK PP +AF+EFED RDA+DA++ RDGY++DGYRLRVE GG S
Sbjct: 30 FGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGGGPGSYR 88
Query: 63 MDRYSSYSSGGSRGV------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
+R + + ++RS YRV+VTGLP S SWQDLKDHMR AGDVCF+ ++
Sbjct: 89 GNRNDRNNGRDGGRMGGRGPPAKRSQYRVMVTGLPPSGSWQDLKDHMREAGDVCFADTYK 148
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
D +G+V++ ++DMKYAI+KLD S FR + +Y+RVRE
Sbjct: 149 D---GSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 188
>gi|166091440|ref|NP_001107213.1| serine/arginine-rich splicing factor 1 [Gallus gallus]
Length = 248
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 106/158 (67%), Gaps = 6/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--- 155
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 156 GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|195996923|ref|XP_002108330.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
gi|190589106|gb|EDV29128.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
Length = 223
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 113/169 (66%), Gaps = 6/169 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+ I LK R P +AF+EFED RDAEDAI GRDGY+FDG RLRVE GG
Sbjct: 30 YGKILSISLKDNRRGPPFAFVEFEDKRDAEDAIDGRDGYDFDGCRLRVEAPRGGGGGGGD 89
Query: 63 MDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
R + G +RRSD+RV+V+GLP + SWQDLKDHMR AG+V F+ V+RD
Sbjct: 90 YGRRGRGNGSGGGRGPARRSDHRVIVSGLPQTGSWQDLKDHMREAGEVYFADVYRD---G 146
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSP 169
TG+V++ Y D+KYA++ LD S+FR + SYVRV+E D RS SRSP
Sbjct: 147 TGVVEFAHYSDVKYALKHLDDSKFRSHEGETSYVRVKE-DRGRSRSRSP 194
>gi|195110201|ref|XP_001999670.1| GI24651 [Drosophila mojavensis]
gi|193916264|gb|EDW15131.1| GI24651 [Drosophila mojavensis]
Length = 246
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 109/163 (66%), Gaps = 11/163 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR----R 58
+G + +DLK PP +AF+EFED RDA+DA++ RDGY++DGYRLRVE GG R
Sbjct: 30 FGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGGGPGSYR 88
Query: 59 HSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
++ DR ++RS YRV+VTGLP S SWQDLKDHMR AGDVCF+ ++
Sbjct: 89 GNNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYK 148
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
D +G+V++ ++DMKYAI+KLD S FR + +Y+RVRE
Sbjct: 149 D---GSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 188
>gi|195388956|ref|XP_002053144.1| GJ23504 [Drosophila virilis]
gi|194151230|gb|EDW66664.1| GJ23504 [Drosophila virilis]
Length = 247
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 109/163 (66%), Gaps = 11/163 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR----R 58
+G + +DLK PP +AF+EFED RDA+DA++ RDGY++DGYRLRVE GG R
Sbjct: 30 FGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGGGPGSYR 88
Query: 59 HSSSMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
++ DR ++RS YRV+VTGLP S SWQDLKDHMR AGDVCF+ ++
Sbjct: 89 GNNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYK 148
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
D +G+V++ ++DMKYAI+KLD S FR + +Y+RVRE
Sbjct: 149 D---GSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 188
>gi|291190420|ref|NP_001167114.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
gi|223648208|gb|ACN10862.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
Length = 251
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 104/159 (65%), Gaps = 7/159 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDA+DA+ GRDGY++DGYRLRVE GR
Sbjct: 38 YGAIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGGGRG 97
Query: 63 MDRYSSYSSGGSRGV---SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD
Sbjct: 98 GFGGGGVGGAPRGRYGPPSRRSEYRVIVSGLPQSGSWQDLKDHMREAGDVCYADVFRD-- 155
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG+V++ +DM YA+RKLD ++FR + +YVRV+
Sbjct: 156 -GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYVRVK 193
>gi|45433540|ref|NP_956887.2| serine/arginine-rich splicing factor 1B [Danio rerio]
gi|71162369|sp|Q6NYA0.1|SRS1B_DANRE RecName: Full=Serine/arginine-rich splicing factor 1B; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1B
gi|44890669|gb|AAH66682.1| Splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Danio rerio]
Length = 245
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 106/158 (67%), Gaps = 6/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 38 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRG 97
Query: 63 MDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD
Sbjct: 98 GGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--- 154
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 155 GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 192
>gi|324504146|gb|ADY41791.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 215
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 114/176 (64%), Gaps = 22/176 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL---------- 52
+G ++ +DLK RPP +AF+EFED RDAEDA+R RDGY+F GYRLRVE
Sbjct: 28 FGKVLFVDLK-DKRPPYFAFVEFEDPRDAEDAVRSRDGYDFYGYRLRVEFPRGVGPRGPG 86
Query: 53 ---AHGGRR--HSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG 107
HG R S D GSR RR++YRV+VTGLP+S SWQDLKDHMR AG
Sbjct: 87 GRPLHGNDRGYSGSRGDGGYGGGGSGSRSGGRRTNYRVIVTGLPTSGSWQDLKDHMREAG 146
Query: 108 DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAF--SRSYVRVREYD 160
DVC++ + RD TG+V+Y DDMKYAIRKLD ++F+ + F +Y+RVRE D
Sbjct: 147 DVCYADITRDG---TGVVEYARLDDMKYAIRKLDDTKFKSHEFQGETAYIRVREDD 199
>gi|240848767|ref|NP_001155687.1| serine/arginine-rich splicing factor 1-like [Acyrthosiphon pisum]
gi|239789607|dbj|BAH71418.1| ACYPI006929 [Acyrthosiphon pisum]
Length = 244
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 18/170 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
+G ++ +DLK PP +AF+EF+D RDAEDA+ RDGY++DGYRLRVE G H
Sbjct: 29 FGKVLFVDLKNQRGPP-FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGNGPHRSG 87
Query: 60 -----SSSMDRYSSYSSGGSRGV-----SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
SS Y+ + G G +RRS YRVLVTGLP+S SWQDLKDHMR AGDV
Sbjct: 88 GGGGSSSGGGSYNRGGASGGSGRSRGPPARRSQYRVLVTGLPASGSWQDLKDHMREAGDV 147
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
C++ V++D +G+V++ YDDMKYA+RKLD S FR + +Y+RV++
Sbjct: 148 CYADVYKDG---SGVVEFLRYDDMKYAVRKLDDSRFRSHEGEVTYIRVKD 194
>gi|334322457|ref|XP_003340247.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Monodelphis
domestica]
gi|395531888|ref|XP_003768005.1| PREDICTED: serine/arginine-rich splicing factor 1 [Sarcophilus
harrisii]
Length = 249
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 104/159 (65%), Gaps = 7/159 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV---SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGGAPRGRYGPPSRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-- 156
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 157 -GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 194
>gi|384252888|gb|EIE26363.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 343
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 111/188 (59%), Gaps = 23/188 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +IDLK+PPRPP +AF+EFE AEDA++GRDGY FD +RVEL+ GG S
Sbjct: 29 YGRIRNIDLKLPPRPPAFAFVEFEKPSHAEDAVKGRDGYVFDNNPIRVELSRGGMGGRSG 88
Query: 63 MDRYS-----------------SYSSGGSRGV-----SRRSDYRVLVTGLPSSASWQDLK 100
D+ S ++ V + S YR V LP SASWQDLK
Sbjct: 89 GDKTSGAPPRDRDEPRGGGGGATFGRAAPPPVPSNFRQKGSAYRATVKNLPMSASWQDLK 148
Query: 101 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVR-VREY 159
DH R+ + VFRDRGG+ G+V++ + +D+ AIRKLD +EFRN F R+Y+R V +
Sbjct: 149 DHFRKVCTPNYVNVFRDRGGVLGVVEFDTPEDLARAIRKLDDTEFRNPFERAYIRVVDDS 208
Query: 160 DSRRSYSR 167
D +R++ +
Sbjct: 209 DDKRNHGK 216
>gi|402899743|ref|XP_003912847.1| PREDICTED: serine/arginine-rich splicing factor 1 [Papio anubis]
Length = 375
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 105/158 (66%), Gaps = 6/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 166 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 225
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 226 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 283
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 284 -TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 320
>gi|348505538|ref|XP_003440318.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 244
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 106/156 (67%), Gaps = 5/156 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDA+DA+ GRDGY++DGYRLRVE GR
Sbjct: 37 YGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGSRGG 96
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+ G SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ V+RD T
Sbjct: 97 FGIGGA-PRGRYGPPSRRSEYRVVVSGLPQSGSWQDLKDHMREAGDVCYADVYRD---GT 152
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
G+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 153 GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 188
>gi|198432543|ref|XP_002131859.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1
[Ciona intestinalis]
Length = 235
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 109/156 (69%), Gaps = 6/156 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ++LK PP +AF+EFED RDAED++ GR+GYNFDGY+LRVE G
Sbjct: 32 YGSIRHVNLKNRRGPP-FAFVEFEDRRDAEDSVHGRNGYNFDGYKLRVEHPRGNGPSQRP 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
SS+ + G SRR+D+RV+V+GLP + SWQDLKDHMR AGDVC++ V+RD T
Sbjct: 91 AYGMSSFRARGGP-PSRRTDFRVMVSGLPPTGSWQDLKDHMREAGDVCYADVYRD---GT 146
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
G+V++ + DDM++A++ LD ++FR + +Y+RV+
Sbjct: 147 GVVEFVNRDDMQFAVKHLDDTKFRSHEGETAYIRVK 182
>gi|357134013|ref|XP_003568614.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Brachypodium distachyon]
Length = 169
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/117 (65%), Positives = 87/117 (74%), Gaps = 4/117 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLK PPR P YAF+E DAEDAI G DGY+F ++VELAHGG S
Sbjct: 56 YGRILDIDLKXPPRRPVYAFVEVIYRCDAEDAIYGHDGYDF--XIIQVELAHGGT--GPS 111
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
DR SYSS G R +R S+YRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 112 FDRLRSYSSSGRREAARHSNYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAG 168
>gi|324500331|gb|ADY40159.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 244
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 109/165 (66%), Gaps = 13/165 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR---- 58
YG I ID+K+ P +AF+EF+D RDA DA+ GRDGY+ DG R+RVE+ G
Sbjct: 30 YGRINYIDIKLSRGAP-FAFIEFDDPRDARDAVHGRDGYDMDGCRIRVEMTRGVGPRGPG 88
Query: 59 ----HSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
++S DR RRS YRV+V+GLPSS SWQDLKDHMR AGD+C++ V
Sbjct: 89 GRPLYASERDRDRRPPPAPRGPPPRRSGYRVIVSGLPSSGSWQDLKDHMRDAGDICYADV 148
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
+RD TG+V+YT YDDMKYAIRKLD ++F+ + SY+RVRE
Sbjct: 149 YRDG---TGVVEYTKYDDMKYAIRKLDDTKFKSHEGDTSYIRVRE 190
>gi|91085405|ref|XP_967263.1| PREDICTED: similar to GA20008-PA [Tribolium castaneum]
gi|270009156|gb|EFA05604.1| hypothetical protein TcasGA2_TC015810 [Tribolium castaneum]
Length = 226
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 108/158 (68%), Gaps = 6/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G + +DLK PP +AF+EFED RDA+DA+ RDGY++DGYRLRVE GG S
Sbjct: 31 FGKVTFVDLKNRRGPP-FAFVEFEDPRDADDAVHARDGYDYDGYRLRVEFPRGGGHGSFR 89
Query: 63 MDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
R SRG +RRS +RVLVTGLP S SWQDLKDHMR AGDVCF+ F+D
Sbjct: 90 GGRGGGDRGRSSRGPPARRSQFRVLVTGLPPSGSWQDLKDHMREAGDVCFADAFKDG--- 146
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
+G+V++ Y+DMKYAI+KLD S FR + SY+RV+E
Sbjct: 147 SGVVEFLRYEDMKYAIKKLDDSRFRSHEGEVSYIRVKE 184
>gi|306966179|ref|NP_001182476.1| splicing factor, arginine/serine-rich 1B [Pan troglodytes]
gi|291405734|ref|XP_002719321.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
gi|297272653|ref|XP_001103473.2| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Macaca mulatta]
gi|348562139|ref|XP_003466868.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 2
[Cavia porcellus]
gi|119614898|gb|EAW94492.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_g [Homo sapiens]
Length = 253
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 105/158 (66%), Gaps = 6/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--- 155
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 156 GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|34785174|gb|AAH56752.1| Sfrs1 protein [Danio rerio]
Length = 188
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/146 (55%), Positives = 99/146 (67%), Gaps = 5/146 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 38 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRG 97
Query: 63 MDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD
Sbjct: 98 GGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG-- 155
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
TG+V++ +DM YA+RKLD ++FR
Sbjct: 156 -TGVVEFVRKEDMTYAVRKLDNTKFR 180
>gi|63101956|gb|AAH95586.1| Sfrs1 protein [Danio rerio]
gi|182889684|gb|AAI65510.1| Sfrs1 protein [Danio rerio]
Length = 258
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 105/158 (66%), Gaps = 6/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 38 YGAIRDIDLKNRRGGQPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRG 97
Query: 63 MDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD
Sbjct: 98 GGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG-- 155
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 156 -TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 192
>gi|417409273|gb|JAA51151.1| Putative splicing factor arginine/serine-rich 1-like protein,
partial [Desmodus rotundus]
Length = 278
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 105/158 (66%), Gaps = 6/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 69 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 128
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 129 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 186
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 187 -TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 223
>gi|395845812|ref|XP_003795615.1| PREDICTED: serine/arginine-rich splicing factor 1 [Otolemur
garnettii]
Length = 312
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 105/158 (66%), Gaps = 6/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 103 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 162
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 163 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 220
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 221 -TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 257
>gi|197099026|ref|NP_001126337.1| serine/arginine-rich splicing factor 1 [Pongo abelii]
gi|68724975|sp|Q5R7H2.3|SRSF1_PONAB RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|55731147|emb|CAH92288.1| hypothetical protein [Pongo abelii]
Length = 248
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 105/158 (66%), Gaps = 6/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--- 155
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 156 GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|5902076|ref|NP_008855.1| serine/arginine-rich splicing factor 1 isoform 1 [Homo sapiens]
gi|34328400|ref|NP_775550.2| serine/arginine-rich splicing factor 1 isoform 1 [Mus musculus]
gi|83921643|ref|NP_001033096.1| serine/arginine-rich splicing factor 1 [Sus scrofa]
gi|115497078|ref|NP_001069862.1| serine/arginine-rich splicing factor 1 [Bos taurus]
gi|157818019|ref|NP_001103022.1| splicing factor, arginine/serine-rich 1B [Rattus norvegicus]
gi|306966181|ref|NP_001182477.1| splicing factor, arginine/serine-rich 1 [Equus caballus]
gi|306966183|ref|NP_001182478.1| splicing factor, arginine/serine-rich 1 [Macaca mulatta]
gi|73966540|ref|XP_866729.1| PREDICTED: serine/arginine-rich splicing factor 1 isoform 2 [Canis
lupus familiaris]
gi|296202380|ref|XP_002748436.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Callithrix jacchus]
gi|332246407|ref|XP_003272345.1| PREDICTED: serine/arginine-rich splicing factor 1 [Nomascus
leucogenys]
gi|344285799|ref|XP_003414647.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Loxodonta
africana]
gi|397493084|ref|XP_003817443.1| PREDICTED: serine/arginine-rich splicing factor 1 [Pan paniscus]
gi|403279712|ref|XP_003931390.1| PREDICTED: serine/arginine-rich splicing factor 1 [Saimiri
boliviensis boliviensis]
gi|410980663|ref|XP_003996696.1| PREDICTED: serine/arginine-rich splicing factor 1 [Felis catus]
gi|426347344|ref|XP_004041313.1| PREDICTED: serine/arginine-rich splicing factor 1 [Gorilla gorilla
gorilla]
gi|730773|sp|Q07955.2|SRSF1_HUMAN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Alternative-splicing factor 1; Short=ASF-1;
AltName: Full=Splicing factor, arginine/serine-rich 1;
AltName: Full=pre-mRNA-splicing factor SF2, P33 subunit
gi|68725069|sp|Q6PDM2.3|SRSF1_MOUSE RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=ASF/SF2; AltName: Full=Pre-mRNA-splicing factor
SRp30a; AltName: Full=Splicing factor,
arginine/serine-rich 1
gi|114152157|sp|Q3YLA6.3|SRSF1_PIG RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|122145605|sp|Q0VCY7.1|SRSF1_BOVIN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|179075|gb|AAA35565.1| alternative [Homo sapiens]
gi|338047|gb|AAA03476.1| SF2p33 [Homo sapiens]
gi|16307434|gb|AAH10264.1| Splicing factor, arginine/serine-rich 1 [Homo sapiens]
gi|21104372|dbj|BAB93456.1| OK/SW-cl.3 [Homo sapiens]
gi|28386236|gb|AAH46773.1| Sfrs1 protein [Mus musculus]
gi|35192949|gb|AAH58627.1| Splicing factor, arginine/serine-rich 1 (ASF/SF2) [Mus musculus]
gi|61364743|gb|AAX42596.1| splicing factor arginine/serine-rich 1 [synthetic construct]
gi|73810229|gb|AAZ86088.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|73810231|gb|AAZ86089.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|74151692|dbj|BAE29641.1| unnamed protein product [Mus musculus]
gi|111306978|gb|AAI19931.1| Splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|119614891|gb|EAW94485.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|119614892|gb|EAW94486.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|149053807|gb|EDM05624.1| rCG34610, isoform CRA_c [Rattus norvegicus]
gi|189053478|dbj|BAG35644.1| unnamed protein product [Homo sapiens]
gi|296477057|tpg|DAA19172.1| TPA: splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|336088097|dbj|BAK39908.1| splicing factor, arginine/serine-rich 1, transcript variant 1
[Cricetulus griseus]
gi|344243483|gb|EGV99586.1| Splicing factor, arginine/serine-rich 1 [Cricetulus griseus]
gi|380784743|gb|AFE64247.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|383420721|gb|AFH33574.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|384941916|gb|AFI34563.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|410224700|gb|JAA09569.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410263644|gb|JAA19788.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308964|gb|JAA33082.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351427|gb|JAA42317.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351431|gb|JAA42319.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|431890828|gb|ELK01707.1| Splicing factor, arginine/serine-rich 1 [Pteropus alecto]
Length = 248
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 105/158 (66%), Gaps = 6/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--- 155
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 156 GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|60811245|gb|AAX36166.1| splicing factor arginine/serine-rich 1 [synthetic construct]
Length = 249
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 105/158 (66%), Gaps = 6/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 156
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 157 -TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|324512727|gb|ADY45260.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 242
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 123/193 (63%), Gaps = 15/193 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ID+K P +AFLEFED RDAEDAIRGRDGY+ DG R+RVE+ G
Sbjct: 30 YGRICFIDVKYSRGAP-FAFLEFEDSRDAEDAIRGRDGYDLDGCRIRVEMTRGVGPRGPG 88
Query: 63 MDRYSSYSSGGSRGVSRR------SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
R + R S YRV+++GLP+S SWQDLKDHMR AGD+C++ V++
Sbjct: 89 GRPIYGGGGYDRRPPAPRGPPVRRSGYRVIISGLPASGSWQDLKDHMRDAGDICYADVYK 148
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYY 175
D TG+V+YT YDDMKYA+RKLD ++F+ + SY+RVRE S RS SR+ SRSP+
Sbjct: 149 D---GTGVVEYTKYDDMKYAVRKLDDTKFKSHEGDTSYIRVREA-SARSRSRTRSRSPHT 204
Query: 176 SRSRSRSPYYSRS 188
R SP YS +
Sbjct: 205 KRD---SPQYSPA 214
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 138
R D RV V LPS+ +DL+D + G +CF V RG +++ D + AIR
Sbjct: 4 RRDCRVYVGNLPSNVKQRDLEDLFDKYGRICFIDVKYSRGAPFAFLEFEDSRDAEDAIR 62
>gi|21358097|ref|NP_652611.1| SF2, isoform A [Drosophila melanogaster]
gi|386765902|ref|NP_001247139.1| SF2, isoform B [Drosophila melanogaster]
gi|194901262|ref|XP_001980171.1| GG20059 [Drosophila erecta]
gi|195349404|ref|XP_002041235.1| GM15444 [Drosophila sechellia]
gi|7243684|gb|AAF43413.1|AF232773_1 SR family splicing factor SF2 [Drosophila melanogaster]
gi|7331146|gb|AAF60294.1|AF234157_1 SR family splicing factor [Drosophila melanogaster]
gi|7300132|gb|AAF55300.1| SF2, isoform A [Drosophila melanogaster]
gi|15292149|gb|AAK93343.1| LD40489p [Drosophila melanogaster]
gi|190651874|gb|EDV49129.1| GG20059 [Drosophila erecta]
gi|194122840|gb|EDW44883.1| GM15444 [Drosophila sechellia]
gi|220946268|gb|ACL85677.1| SF2-PA [synthetic construct]
gi|220955952|gb|ACL90519.1| SF2-PA [synthetic construct]
gi|383292748|gb|AFH06457.1| SF2, isoform B [Drosophila melanogaster]
Length = 255
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 110/163 (67%), Gaps = 11/163 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G + +DLK PP +AF+EFED RDA+DA++ RDGY++DGYRLRVE GG S
Sbjct: 30 FGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGGGPGSYR 88
Query: 63 MDRYSSYSSGGSRGV------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
+ S G + ++RS YRV+VTGLP+S SWQDLKDHMR AGDVCF+ ++
Sbjct: 89 GGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYK 148
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
D +G+V++ ++DMKYAI+KLD S FR + +Y+RVRE
Sbjct: 149 D---GSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 188
>gi|195501014|ref|XP_002097620.1| GE26323 [Drosophila yakuba]
gi|194183721|gb|EDW97332.1| GE26323 [Drosophila yakuba]
Length = 254
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 110/163 (67%), Gaps = 11/163 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G + +DLK PP +AF+EFED RDA+DA++ RDGY++DGYRLRVE GG S
Sbjct: 30 FGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGGGPGSYR 88
Query: 63 MDRYSSYSSGGSRGV------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
+ S G + ++RS YRV+VTGLP+S SWQDLKDHMR AGDVCF+ ++
Sbjct: 89 GGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYK 148
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
D +G+V++ ++DMKYAI+KLD S FR + +Y+RVRE
Sbjct: 149 D---GSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 188
>gi|170591727|ref|XP_001900621.1| SF2 [Brugia malayi]
gi|158591773|gb|EDP30376.1| SF2, putative [Brugia malayi]
Length = 298
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 139/233 (59%), Gaps = 14/233 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ID+K P +AF+EF+D RDA DA+ GRDGY+FDG R+RVEL G
Sbjct: 30 YGRINFIDIKFTRDVP-FAFIEFDDPRDARDAVHGRDGYDFDGCRIRVELTRGVGPRGPG 88
Query: 63 MDRY--SSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
S RRS YRV+V+GLP + SWQDLKDHMR AG++C++ VFRD
Sbjct: 89 GRPLYGPDSRSPRRGPPPRRSGYRVIVSGLPDTGSWQDLKDHMRDAGEICYADVFRDG-- 146
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRR-SYSRSPSRSPYYSRS 178
TG+V+YT+Y+DMKYA+RKLD ++F+ + +Y+RV+E + + SRS S +P +RS
Sbjct: 147 -TGVVEYTNYEDMKYALRKLDDTKFKSHEGEVTYIRVKEANINSPNRSRSRSHTPRKTRS 205
Query: 179 RSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGS 231
SP YS +RS + R + RRS SP S++ RSPS +
Sbjct: 206 ---SPKYSPTRS-ASRSRSRSSRSRSHTRTSFVRRST--SPVHSSNSRSPSKT 252
>gi|118835441|gb|AAI28932.1| Sfrs1 protein [Xenopus laevis]
Length = 294
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 108/174 (62%), Gaps = 22/174 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 69 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGAGGR 128
Query: 63 MDRYSSYSSGGSRGV------------------SRRSDYRVLVTGLPSSASWQDLKDHMR 104
SGG G SRRS+YRV+V+GLP S SWQDLKDHMR
Sbjct: 129 GGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVVVSGLPPSGSWQDLKDHMR 188
Query: 105 RAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
AGDVC++ VFRD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 189 EAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 239
>gi|114108043|gb|AAI23123.1| Sfrs1 protein [Xenopus laevis]
Length = 296
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 108/174 (62%), Gaps = 22/174 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 71 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGAGGR 130
Query: 63 MDRYSSYSSGGSRGV------------------SRRSDYRVLVTGLPSSASWQDLKDHMR 104
SGG G SRRS+YRV+V+GLP S SWQDLKDHMR
Sbjct: 131 GGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVVVSGLPPSGSWQDLKDHMR 190
Query: 105 RAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
AGDVC++ VFRD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 191 EAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 241
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 148/255 (58%), Gaps = 18/255 (7%)
Query: 3 YGPIVDIDLKIPPRP-PGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
YG I +ID+K R P +AF++F+D RDA++A+R RDGY FDG RLRVE G
Sbjct: 27 YGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARDGYEFDGKRLRVEFPRGQGPRGP 86
Query: 62 SMDRYSSYSS--GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
S G + G +RS+YR++V GLP S SWQD+KDH+++AG++C++ V
Sbjct: 87 GGRPTRDNGSRFGRNGGPPKRSNYRLIVEGLPRSGSWQDIKDHLKQAGEICYANVH---- 142
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE-------YDSRRSYSRSPSR 171
G+V++ Y+D++YAIRK D ++FR + +Y+R++E + RR+ S S S+
Sbjct: 143 NGEGVVEFERYEDLEYAIRKYDDTKFRSHKGETAYIRLKEDKSEYAKENKRRTRSISRSK 202
Query: 172 SPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSR-RSPSLSPARSASQ-RSPS 229
SP R S S R+ S S +SRS SP + R RS S SPAR S+ RSP
Sbjct: 203 SPIRGRCSRSSSRSKSSIRGRRNGSAS-KSRSRSPVSRQHRDRSESGSPARRVSRSRSPI 261
Query: 230 GSPPRSFSRSGSFAR 244
R+ S SG+ AR
Sbjct: 262 SRQRRARSESGTPAR 276
>gi|291228500|ref|XP_002734208.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 244
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 108/172 (62%), Gaps = 20/172 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLK PP ++F+EFED RDAEDA+RGRDGY++DGYRLRVE GGR
Sbjct: 37 YGNILDIDLKNRRGPP-FSFVEFEDKRDAEDAVRGRDGYDYDGYRLRVEFPRGGRAGGGP 95
Query: 63 MDRYSSYSSGGSRGVSRR---------------SDYRVLVTGLPSSASWQDLKDHMRRAG 107
GG G S+YR LV+GLP + SWQDLKDHMR AG
Sbjct: 96 PRGIGGGGGGGGGGGGGLGGGPGRGRGGPPARRSEYRCLVSGLPPTGSWQDLKDHMREAG 155
Query: 108 DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
DVCF+ V+RD TG+V++ Y+DMKYA + LD ++FR + SY+RV+E
Sbjct: 156 DVCFADVYRDG---TGVVEFLRYEDMKYAAKHLDDTKFRSHEGETSYIRVKE 204
>gi|321460885|gb|EFX71923.1| hypothetical protein DAPPUDRAFT_59706 [Daphnia pulex]
Length = 255
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 106/171 (61%), Gaps = 19/171 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I IDLK PP +AF+EFED RDAEDA+ RDGY++DGYRLRVE G +
Sbjct: 32 FGKIAYIDLKNRRGPP-FAFVEFEDPRDAEDAVHARDGYDYDGYRLRVEFPRGSQNSGGG 90
Query: 63 MDRYSSYSSGGSRGV--------------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGD 108
G G +RR++YRV+VTGLP + SWQDLKDHMR AGD
Sbjct: 91 HSGGRGGDGGRGGGDGGGSNGGGRSRGPPARRTNYRVIVTGLPPTGSWQDLKDHMREAGD 150
Query: 109 VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
VC++ ++D TG+V++ Y+DMKYAI+KLD S FR + SYVRV+E
Sbjct: 151 VCYADTYKD---GTGMVEFLRYEDMKYAIKKLDDSRFRSHEGEVSYVRVKE 198
>gi|27503247|gb|AAH42354.1| Sfrs1 protein, partial [Xenopus laevis]
Length = 283
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 108/174 (62%), Gaps = 22/174 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 58 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGAGGR 117
Query: 63 MDRYSSYSSGGSRGV------------------SRRSDYRVLVTGLPSSASWQDLKDHMR 104
SGG G SRRS+YRV+V+GLP S SWQDLKDHMR
Sbjct: 118 GGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVVVSGLPPSGSWQDLKDHMR 177
Query: 105 RAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
AGDVC++ VFRD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 178 EAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 228
>gi|62088696|dbj|BAD92795.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) variant [Homo sapiens]
Length = 233
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 71 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 130
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 131 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 188
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
TG+V++ +DM YA+RKLD ++FR + Y R+ +D
Sbjct: 189 -TGVVEFVRKEDMTYAVRKLDNTKFR-SHEVGYTRILFFDQ 227
>gi|269849649|sp|Q7SXP4.2|SRS1A_DANRE RecName: Full=Serine/arginine-rich splicing factor 1A; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1A
gi|157423199|gb|AAI53597.1| Sfrs1l protein [Danio rerio]
gi|157423322|gb|AAI53598.1| Sfrs1l protein [Danio rerio]
Length = 257
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 106/168 (63%), Gaps = 16/168 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ RDGY++DGYRLRVE GR
Sbjct: 38 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRG 97
Query: 63 MDRYSSYSSGGSRGV------------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
GG G SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC
Sbjct: 98 GFGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVC 157
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
++ VFRD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 158 YADVFRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 202
>gi|410915734|ref|XP_003971342.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
Length = 238
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 104/156 (66%), Gaps = 7/156 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I DIDLK P +AF+EFED RD+ DA+ RDGY++DGYRLRVE GGR
Sbjct: 38 FGAIRDIDLKNRRGGPPFAFVEFEDPRDSGDAVYERDGYDYDGYRLRVEFPRGGRGGGGR 97
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
G SRRSDYRV+V+GLP S SWQDLKDHMR AGDVC++ V+RD T
Sbjct: 98 GMGPPRTRYGPP---SRRSDYRVVVSGLPQSGSWQDLKDHMREAGDVCYTDVYRDG---T 151
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
G+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 152 GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 187
>gi|47087630|ref|NP_998180.1| serine/arginine-rich splicing factor 1A [Danio rerio]
gi|33416587|gb|AAH55511.1| Splicing factor, arginine/serine-rich 1, like [Danio rerio]
Length = 245
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 106/169 (62%), Gaps = 17/169 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ RDGY++DGYRLRVE GR
Sbjct: 38 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRG 97
Query: 63 MDRYSSYSSGGSRGV-------------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
GG G SRRS+YRV+V+GLP S SWQDLKDHMR AGDV
Sbjct: 98 GFGGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDV 157
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
C++ VFRD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 158 CYADVFRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 203
>gi|118582269|ref|NP_001071634.1| serine/arginine-rich splicing factor 1 isoform 2 [Homo sapiens]
gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sapiens]
gi|119614895|gb|EAW94489.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_d [Homo sapiens]
gi|168277706|dbj|BAG10831.1| splicing factor, arginine/serine-rich 1 [synthetic construct]
gi|410263646|gb|JAA19789.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308966|gb|JAA33083.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351429|gb|JAA42318.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
Length = 201
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 156
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
TG+V++ +DM YA+RKLD ++FR + Y R+ +D
Sbjct: 157 -TGVVEFVRKEDMTYAVRKLDNTKFR-SHEVGYTRILFFDQ 195
>gi|170591729|ref|XP_001900622.1| SF2 [Brugia malayi]
gi|158591774|gb|EDP30377.1| SF2, putative [Brugia malayi]
Length = 277
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 105/164 (64%), Gaps = 12/164 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ID+K+ P +AF+EF+D RDA DAIRGRDGY DG R+RVE+ G
Sbjct: 70 YGHINFIDVKLTRGAP-FAFIEFDDPRDARDAIRGRDGYELDGCRIRVEMTRGVGPRGPG 128
Query: 63 MDRYSSYSSG-------GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
G RG RRS YRVLVTGLP + SWQDLKDHMR AGD+C++ VF
Sbjct: 129 GRPLYGPDRGERDRRPPPPRGPPRRSGYRVLVTGLPVTGSWQDLKDHMREAGDICYADVF 188
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
+D TG+V+YT DDMKYAI+KLD ++F+ + SY+RV+E
Sbjct: 189 KDG---TGVVEYTRQDDMKYAIKKLDDTKFKSHEGETSYIRVKE 229
>gi|195451089|ref|XP_002072763.1| GK13511 [Drosophila willistoni]
gi|194168848|gb|EDW83749.1| GK13511 [Drosophila willistoni]
Length = 263
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 110/166 (66%), Gaps = 14/166 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G + +DLK PP +AF+EFED RDA+DA++ RDGY++DGYRLRVE GG S
Sbjct: 30 FGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGGGPGSYR 88
Query: 63 MDRYSSYSSGGSRGV---------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 113
+ + G G ++RS YRV+VTGLP+S SWQDLKDHMR AGDVCF+
Sbjct: 89 GGNRNDRNRDGGGGGGRMGGRGPPAKRSQYRVMVTGLPTSGSWQDLKDHMREAGDVCFAD 148
Query: 114 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
++D +G+V++ ++DMKYAI+KLD S FR + +Y+RVRE
Sbjct: 149 TYKD---GSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVRE 191
>gi|426236979|ref|XP_004023550.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1 [Ovis aries]
Length = 190
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/144 (54%), Positives = 96/144 (66%), Gaps = 12/144 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRXGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRR 98
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD T
Sbjct: 99 GRYGPP---------SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---T 146
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
G+V++ +DM YA+RKLD ++FR
Sbjct: 147 GVVEFVRKEDMTYAVRKLDNTKFR 170
>gi|351713363|gb|EHB16282.1| Splicing factor, arginine/serine-rich 1 [Heterocephalus glaber]
Length = 292
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 98/146 (67%), Gaps = 5/146 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 156
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
TG+V++ +DM YA+RKLD ++FR
Sbjct: 157 -TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|179074|gb|AAA35564.1| alternative [Homo sapiens]
gi|119614894|gb|EAW94488.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_c [Homo sapiens]
Length = 292
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 98/146 (67%), Gaps = 5/146 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 156
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
TG+V++ +DM YA+RKLD ++FR
Sbjct: 157 -TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|312074323|ref|XP_003139919.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|307764921|gb|EFO24155.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|393908262|gb|EJD74982.1| arginine/serine-rich splicing factor 1, variant 1 [Loa loa]
gi|393908263|gb|EJD74983.1| arginine/serine-rich splicing factor 1, variant 2 [Loa loa]
gi|393908264|gb|EJD74984.1| arginine/serine-rich splicing factor 1, variant 3 [Loa loa]
gi|393908265|gb|EJD74985.1| arginine/serine-rich splicing factor 1, variant 4 [Loa loa]
gi|402591888|gb|EJW85817.1| hypothetical protein WUBG_03274 [Wuchereria bancrofti]
Length = 237
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 105/164 (64%), Gaps = 12/164 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ID+K+ P +AF+EF+D RDA DAIRGRDGY DG R+RVE+ G
Sbjct: 30 YGHINFIDVKLTRGAP-FAFIEFDDPRDARDAIRGRDGYELDGCRIRVEMTRGVGPRGPG 88
Query: 63 MDRYSSYSSG-------GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
G RG RRS YRVLVTGLP + SWQDLKDHMR AGD+C++ VF
Sbjct: 89 GRPLYGPDRGERDRRPPPPRGPPRRSGYRVLVTGLPVTGSWQDLKDHMREAGDICYADVF 148
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
+D TG+V+YT DDMKYAI+KLD ++F+ + SY+RV+E
Sbjct: 149 KDG---TGVVEYTRQDDMKYAIKKLDDTKFKSHEGETSYIRVKE 189
>gi|148669917|gb|EDL01864.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_b
[Mus musculus]
Length = 193
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 98/146 (67%), Gaps = 5/146 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--- 155
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
TG+V++ +DM YA+RKLD ++FR
Sbjct: 156 GTGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|158260889|dbj|BAF82622.1| unnamed protein product [Homo sapiens]
Length = 248
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 104/158 (65%), Gaps = 6/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED +DAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPQDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--- 155
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 156 GTGAVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|402581303|gb|EJW75251.1| alternative splicing regulator, partial [Wuchereria bancrofti]
Length = 217
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 132/234 (56%), Gaps = 33/234 (14%)
Query: 22 FLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRY--SSYSSGGSRGVSR 79
F + ED RDA DA+ GRDGY+FDG R+RVEL G S R
Sbjct: 1 FGKLEDCRDARDAVHGRDGYDFDGCRIRVELTRGVGPRGPGGRPLYGPDPRSPRRGPPPR 60
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
RS YRV+V+GLP + SWQDLKDHMR AG++C++ VFRD TG+V+YT+Y+DMKYA+RK
Sbjct: 61 RSGYRVIVSGLPDTGSWQDLKDHMRDAGEICYADVFRD---GTGVVEYTNYEDMKYALRK 117
Query: 140 LDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS 198
LD ++F+ + +Y+RV+E + SP SRSRS +P +RS S YS
Sbjct: 118 LDDTKFKSHEGEVTYIRVKE---------ANINSPNRSRSRSHTPRKTRS-----SPKYS 163
Query: 199 P-----------RSRSYSPRGKYSRRSPSLSPARSASQRSPSGSPPRSFSRSGS 241
P R + RR S SP S++ RSPS + ++ SRSGS
Sbjct: 164 PTRSPSKSRSRSSRSRSHSRTSFVRR--STSPVHSSNSRSPSKTRSKTRSRSGS 215
>gi|354472029|ref|XP_003498243.1| PREDICTED: serine/arginine-rich splicing factor 1 [Cricetulus
griseus]
Length = 201
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 98/146 (67%), Gaps = 5/146 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 156
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
TG+V++ +DM YA+RKLD ++FR
Sbjct: 157 -TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|55742372|ref|NP_001006919.1| serine/arginine-rich splicing factor 1 [Xenopus (Silurana)
tropicalis]
gi|92058727|sp|Q6DII2.1|SRSF1_XENTR RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|49523075|gb|AAH75558.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Xenopus (Silurana)
tropicalis]
Length = 267
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 107/177 (60%), Gaps = 25/177 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL---------- 52
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGAGGR 98
Query: 53 -------AHGGRRHSSSMDRYSSYSSGGSRG----VSRRSDYRVLVTGLPSSASWQDLKD 101
GG G RG SRRS+YRV+V+GLP S SWQDLKD
Sbjct: 99 GGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVVVSGLPPSGSWQDLKD 158
Query: 102 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
HMR AGDVC++ VFRD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 159 HMREAGDVCYADVFRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 212
>gi|417397107|gb|JAA45587.1| Putative serine/arginine-rich splicing factor 1 isoform 2 [Desmodus
rotundus]
Length = 207
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 98/146 (67%), Gaps = 5/146 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 156
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
TG+V++ +DM YA+RKLD ++FR
Sbjct: 157 -TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|336088099|dbj|BAK39909.1| splicing factor, arginine/serine-rich 1, transcript variant 2
[Cricetulus griseus]
Length = 201
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 98/146 (67%), Gaps = 5/146 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 156
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
TG+V++ +DM YA+RKLD ++FR
Sbjct: 157 -TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|118582271|ref|NP_001071635.1| serine/arginine-rich splicing factor 1 isoform 2 [Mus musculus]
gi|26347437|dbj|BAC37367.1| unnamed protein product [Mus musculus]
Length = 201
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 98/146 (67%), Gaps = 5/146 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 156
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
TG+V++ +DM YA+RKLD ++FR
Sbjct: 157 -TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 105/169 (62%), Gaps = 17/169 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG------- 55
YG I +D+K R P +AF+EFED+RDAEDA+R RDGY FDG R+RVE G
Sbjct: 32 YGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPS 90
Query: 56 GRRHSSSMDRYSSYSSGGSRGVSRRSD-----YRVLVTGLPSSASWQDLKDHMRRAGDVC 110
GR D GG G YRV+V GLP + SWQDLKDHMR AGDVC
Sbjct: 91 GRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVEGLPPTGSWQDLKDHMRDAGDVC 150
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
++ V RD TG+V++T Y+D+KYA+RKLD ++FR + +Y+RVRE
Sbjct: 151 YADVARD---GTGVVEFTRYEDVKYAVRKLDDTKFRSHEGETAYIRVRE 196
>gi|339244049|ref|XP_003377950.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
gi|316973185|gb|EFV56805.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
Length = 300
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 96/146 (65%), Gaps = 6/146 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS-- 60
+G +V +DLK PP +AF+EFED RDAEDA+R +DGY DGY+LRVE G H
Sbjct: 33 FGKVVAVDLKNRKGPP-FAFVEFEDARDAEDAVRYKDGYELDGYKLRVEFPRGSGVHPGY 91
Query: 61 SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ +R + +G SR + +R ++GLP+S SWQDLKDHMR AGDVCFS V+++
Sbjct: 92 NQRNRMLAGRNGCRTNASRHTGFRCYISGLPASGSWQDLKDHMREAGDVCFSDVYKNG-- 149
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
G+V+Y +D++YA+ L+ S FR
Sbjct: 150 -NGVVEYMRAEDLEYALANLNESRFR 174
>gi|348562137|ref|XP_003466867.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Cavia porcellus]
gi|380788319|gb|AFE66035.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|383420723|gb|AFH33575.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|384941914|gb|AFI34562.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
Length = 201
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 98/146 (67%), Gaps = 5/146 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 156
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
TG+V++ +DM YA+RKLD ++FR
Sbjct: 157 -TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 146/267 (54%), Gaps = 45/267 (16%)
Query: 3 YGPIVDIDLKIPPRP-PGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
YG I +ID+K R P +AF++F+D RDA++A+R RDGY FDG RLRVE G
Sbjct: 27 YGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARDGYEFDGKRLRVEFPRGQGPRGP 86
Query: 62 SMDRYSSYSS--GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
S G + G +RS+YR++V GLP S SWQD+KDH+++AG++C++ V
Sbjct: 87 GGRPTRDNGSRFGRNGGPPKRSNYRLIVEGLPRSGSWQDIKDHLKQAGEICYANVH---- 142
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRS 178
G+V++ Y+D++YA RK D ++FR + +Y+R++E +S Y +
Sbjct: 143 NGEGVVEFERYEDLEYAFRKYDDTKFRSHKGETAYIRLKE-----------DKSEYAKEN 191
Query: 179 RSRSPYYSRSRSPSRSWSY--------------SPRSRSYSPRGKYSR-RSPSLSPARSA 223
+ R+ SRS+SP R S + +SRS SP ++ R RS S SPAR
Sbjct: 192 KRRTRSISRSKSPIRGRSSSRSKSSIRGRRTGSASKSRSRSPVSRHHRDRSESGSPARRV 251
Query: 224 SQ-----------RSPSGSPPRSFSRS 239
S+ RS SG+P R +RS
Sbjct: 252 SRSRSPISRQRPARSESGTPARRATRS 278
>gi|355754034|gb|EHH57999.1| hypothetical protein EGM_07756 [Macaca fascicularis]
Length = 248
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 104/158 (65%), Gaps = 6/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++ GYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYYGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GSGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--- 155
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 156 GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|308490885|ref|XP_003107634.1| CRE-RSP-3 protein [Caenorhabditis remanei]
gi|308250503|gb|EFO94455.1| CRE-RSP-3 protein [Caenorhabditis remanei]
Length = 262
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 105/172 (61%), Gaps = 20/172 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ID+K R P +AF+EFED+RDAEDA+R RDGY FDG R+RVE G
Sbjct: 32 YGRIKYIDIK-SGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPG 90
Query: 63 MDRYSS---------------YSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG 107
+ G G RR+ YRV+V GLP + SWQDLKDHMR AG
Sbjct: 91 GRPLNEEGGGYRGGGDFRGGRGGGRGGGGPQRRTGYRVIVEGLPPTGSWQDLKDHMREAG 150
Query: 108 DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
DVC++ V RD TG+V++T YDD+KYA+RKLD ++FR + +Y+RVRE
Sbjct: 151 DVCYADVARD---GTGVVEFTRYDDVKYAVRKLDDTKFRSHEGETAYIRVRE 199
>gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus]
Length = 248
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/146 (53%), Positives = 97/146 (66%), Gaps = 5/146 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRR++ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRAENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--- 155
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
TG+V+ +DM YA+RKLD ++FR
Sbjct: 156 GTGVVECVPKEDMTYAVRKLDNTKFR 181
>gi|348518531|ref|XP_003446785.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 264
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 106/167 (63%), Gaps = 15/167 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF++F+D RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 38 YGSIRDIDLKNRRGGPPFAFVQFDDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGGG 97
Query: 63 MDRYSSYSSGGSRGV-----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
GG G SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC+
Sbjct: 98 GGGGGGGGGGGGGGGMGPPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCY 157
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
+ VFRD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 158 ADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 201
>gi|341889616|gb|EGT45551.1| hypothetical protein CAEBREN_06053 [Caenorhabditis brenneri]
Length = 260
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 106/175 (60%), Gaps = 25/175 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ID+K R P +AF+EFED+RDAEDA+R RDGY FDG R+RVE G
Sbjct: 33 YGRIKYIDIK-SGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPG 91
Query: 63 MDRYSSYSSGG------------------SRGVSRRSDYRVLVTGLPSSASWQDLKDHMR 104
+ GG G RR+ YRV+V GLP + SWQDLKDHMR
Sbjct: 92 GRPLN--DDGGYSGGRDRGDYRGGRGGGRGGGPQRRTGYRVIVEGLPPTGSWQDLKDHMR 149
Query: 105 RAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
AGDVC++ V RD TG+V++T YDD+KYA+RKLD ++FR + +Y+RVRE
Sbjct: 150 EAGDVCYADVARD---GTGVVEFTRYDDVKYAVRKLDDTKFRSHEGETAYIRVRE 201
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 147/255 (57%), Gaps = 18/255 (7%)
Query: 3 YGPIVDIDLKIPPRP-PGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
YG I +ID+K R P +AF++F+D RDA++A+R DGY FDG RLRVE G
Sbjct: 27 YGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRACDGYEFDGKRLRVEFPRGKGPRGP 86
Query: 62 SMDRYSSYSS--GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
S G + G +RS+YR++V GLP S SWQD+KDH+++AG++C++ V
Sbjct: 87 GGRPTRDNGSRFGRNGGPPKRSNYRLIVEGLPRSGSWQDIKDHLKQAGEICYANVH---- 142
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE-------YDSRRSYSRSPSR 171
G+V++ Y++++YAIRK D ++FR + +Y+R++E + RR+ S S S+
Sbjct: 143 NGEGVVEFERYENLEYAIRKYDDTKFRSHKGETAYIRLKEDKSEYAKENKRRTRSISRSK 202
Query: 172 SPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSR-RSPSLSPARSASQ-RSPS 229
SP R S S R+ S S +SRS SP + R RS S SPAR S+ RSP
Sbjct: 203 SPNRGRCSRSSSRSKSSIRGRRTGSAS-KSRSRSPVSRQHRDRSESGSPARRVSRSRSPI 261
Query: 230 GSPPRSFSRSGSFAR 244
R+ S SG+ AR
Sbjct: 262 SRQRRARSESGTPAR 276
>gi|25150290|ref|NP_499649.2| Protein RSP-3 [Caenorhabditis elegans]
gi|56749665|sp|Q9NEW6.2|RSP3_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 3;
AltName: Full=CeSF2; AltName: Full=CeSF2/ASF
gi|21615505|emb|CAC35847.2| Protein RSP-3 [Caenorhabditis elegans]
Length = 258
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 105/171 (61%), Gaps = 21/171 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVE----------- 51
YG I +D+K R P +AF+EFED+RDAEDA+R RDGY FDG R+RVE
Sbjct: 32 YGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPG 90
Query: 52 ---LAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGD 108
L GG G RR+ YRV+V GLP + SWQDLKDHMR AGD
Sbjct: 91 GRPLQDGGDHRGGDFRGGRGGGR--GGGPQRRTGYRVIVEGLPPTGSWQDLKDHMRDAGD 148
Query: 109 VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
VC++ V RD TG+V++T Y+D+KYA+RKLD ++FR + +Y+RVRE
Sbjct: 149 VCYADVARD---GTGVVEFTRYEDVKYAVRKLDDTKFRSHEGETAYIRVRE 196
>gi|307173759|gb|EFN64546.1| Splicing factor, arginine/serine-rich 1 [Camponotus floridanus]
Length = 262
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 103/169 (60%), Gaps = 15/169 (8%)
Query: 2 MYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
+ I + K+ P+ D RDAEDA+ RDGY++DGYRLRVE GG ++
Sbjct: 44 LIAAISGLVAKLEPKSKAPIISLQNDSRDAEDAVHARDGYDYDGYRLRVEFPRGGGPSNN 103
Query: 62 SMDRYSSYSSG-GSRGV----------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
+ SG G RG +RRS YRVLV+GLP + SWQDLKDHMR AGDVC
Sbjct: 104 FRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVSGLPPTGSWQDLKDHMREAGDVC 163
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
F+ V++D TG+V++ +DDMKYA++KLD S FR + +Y+RVRE
Sbjct: 164 FADVYKDG---TGVVEFLRHDDMKYAVKKLDDSRFRSHEGEVAYIRVRE 209
>gi|297264540|ref|XP_001103237.2| PREDICTED: splicing factor, arginine/serine-rich 1-like [Macaca
mulatta]
Length = 300
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 102/158 (64%), Gaps = 6/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAED + GRDGY++ GYRLRVE GR
Sbjct: 91 YGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGYDYYGYRLRVEFPPSGRGTGRG 150
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRR + RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 151 GSGGGGGGAPRGRYGPPSRRCENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 208
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
TG++++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 209 -TGVMEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 245
>gi|355565042|gb|EHH21531.1| hypothetical protein EGK_04623, partial [Macaca mulatta]
Length = 231
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 96/146 (65%), Gaps = 5/146 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAED + GRDGY++ GYRLRVE GR
Sbjct: 69 YGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGYDYYGYRLRVEFPPSGRGTGRG 128
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 129 GSGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 186
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
TG+V++ +DM YA+RKLD ++FR
Sbjct: 187 -TGVVEFVRKEDMTYAVRKLDNTKFR 211
>gi|119614893|gb|EAW94487.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_b [Homo sapiens]
Length = 230
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 97/143 (67%), Gaps = 6/143 (4%)
Query: 18 PGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV 77
P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR + R
Sbjct: 36 PPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYG 95
Query: 78 --SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 135
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM Y
Sbjct: 96 PPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTY 152
Query: 136 AIRKLDRSEFR-NAFSRSYVRVR 157
A+RKLD ++FR + +Y+RV+
Sbjct: 153 AVRKLDNTKFRSHEGETAYIRVK 175
>gi|355568562|gb|EHH24843.1| hypothetical protein EGK_08569 [Macaca mulatta]
Length = 292
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 97/146 (66%), Gaps = 5/146 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++ GYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYYGYRLRVEFPPSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG-- 156
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
TG++++ +DM YA+RKLD ++FR
Sbjct: 157 -TGVMEFVRKEDMTYAVRKLDNTKFR 181
>gi|413948773|gb|AFW81422.1| hypothetical protein ZEAMMB73_489346 [Zea mays]
Length = 446
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/117 (58%), Positives = 78/117 (66%), Gaps = 2/117 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DIDLKIPPRPP YA +EFED DA+DAI GRD YNFDGYRL + +A
Sbjct: 271 YGRILDIDLKIPPRPPRYAVVEFEDPHDADDAIYGRDEYNFDGYRLLLIVAEASLILMIV 330
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
S ++ G V+VTGLPSS SWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 331 QAAISVHAVEVFLGA--LISMVVMVTGLPSSVSWQDLKDHMRRAGDVCFSDVYREVG 385
>gi|324516767|gb|ADY46629.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 210
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 97/150 (64%), Gaps = 12/150 (8%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
M+YG +I R +F+EF+D RDA DA+RGRDGY+FDG RLRVEL G
Sbjct: 1 MLYG------CQIHTRRTILSFIEFDDPRDARDAVRGRDGYSFDGCRLRVELTRGVGPRG 54
Query: 61 SSMDRY---SSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
S RRS YRV+++GLP+S SWQDLKDHMR AGD+C+++V +D
Sbjct: 55 PGGRPLYAAEQMSPRRRAPPPRRSGYRVVISGLPASGSWQDLKDHMREAGDICYAEVSKD 114
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEFRN 147
TG+V+Y +YDDMKYA+RKLD ++F++
Sbjct: 115 G---TGVVEYINYDDMKYAVRKLDDTKFKS 141
>gi|302828648|ref|XP_002945891.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
gi|300268706|gb|EFJ52886.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
Length = 288
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 99/158 (62%), Gaps = 7/158 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I ID+K P RPPG+AF+EF+D R AE+A R R+ Y F G R+RVE+A GG S
Sbjct: 33 FGRIRMIDIKKPARPPGFAFIEFDDPRSAEEAARRRNNYEFAGMRMRVEIARGGEGSGSQ 92
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD-RGGM 121
Y R + +R+ V GLP SASWQDLKD +RR ++++F+D R +
Sbjct: 93 QPLRIGY-----RPIRNTLGFRLYVKGLPRSASWQDLKDFVRRVCKPLYTEIFKDHRDNV 147
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS-YVRVRE 158
G+V++ S DDMK A+RKLD SEF N F + YVR+ E
Sbjct: 148 LGVVEFESKDDMKAALRKLDDSEFTNPFDKGHYVRLVE 185
>gi|428170004|gb|EKX38933.1| hypothetical protein GUITHDRAFT_39633, partial [Guillardia theta
CCMP2712]
Length = 171
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 105/160 (65%), Gaps = 14/160 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA----IRGRDGYNFDGYRLRVELAHGGRR 58
YG I DI++K P RPP +AF+EF++ DAEDA + DG F+G RLRVE++ G
Sbjct: 20 YGRIRDIEVKTPSRPPAFAFVEFDNLYDAEDAGMCALPCTDGVMFEGARLRVEMSRG--- 76
Query: 59 HSSSMDRYSSYSSGGS--RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
+++ Y SG + R + RRSDYRV+++GLP SASWQDLKD R+AG++ ++ V R
Sbjct: 77 -TAATYGYDKRGSGKAPPRNL-RRSDYRVIISGLPKSASWQDLKDFFRQAGEIVYTDVDR 134
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 156
G GIV++ + DD YAI+K D +EF N F R Y+RV
Sbjct: 135 QGG---GIVEFANEDDRDYAIKKFDDTEFSNPFDRGYIRV 171
>gi|301790878|ref|XP_002930446.1| PREDICTED: splicing factor, arginine/serine-rich 9-like [Ailuropoda
melanoleuca]
Length = 253
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 106/158 (67%), Gaps = 16/158 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL--AHGGRRHS 60
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +GGR
Sbjct: 69 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGR--- 125
Query: 61 SSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
+ + GG G +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 126 ------AGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD-- 177
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 178 GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 214
>gi|281340832|gb|EFB16416.1| hypothetical protein PANDA_020890 [Ailuropoda melanoleuca]
Length = 215
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 106/158 (67%), Gaps = 16/158 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL--AHGGRRHS 60
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +GGR
Sbjct: 31 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGR--- 87
Query: 61 SSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
+ + GG G +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 88 ------AGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD-- 139
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 140 GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 176
>gi|47086241|ref|NP_998064.1| splicing factor, arginine/serine-rich 9 [Danio rerio]
gi|45501375|gb|AAH67134.1| Zgc:77449 [Danio rerio]
Length = 244
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 99/158 (62%), Gaps = 5/158 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG-GRRHSS 61
YG I DI+LK +AF+ FED RDAEDA+ GR+GY F +LRVE G + S
Sbjct: 27 YGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNGYGFGDCKLRVEYPRSSGSKFSG 86
Query: 62 SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
G +RRS++RV+VTGLP + SWQDLKDHMR AGDVCF+ V RD
Sbjct: 87 PAGGGGGGPRGRFGPPTRRSEFRVIVTGLPPTGSWQDLKDHMREAGDVCFADVQRD---G 143
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
G+V++ +DM+YA+R+LD +EFR + +Y+RV E
Sbjct: 144 EGVVEFLRREDMEYALRRLDSTEFRSHQGETAYIRVME 181
>gi|390336105|ref|XP_003724280.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Strongylocentrotus purpuratus]
Length = 299
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 104/170 (61%), Gaps = 28/170 (16%)
Query: 3 YGPIVDIDLKIPPRPPGY--------------AFLEFEDYRDAEDAIRGRDGYNFDGYRL 48
+G + DIDLK RPP + AF+EF D RDA+DA+ RDGYN+DGYR+
Sbjct: 39 FGSVADIDLK-NKRPPSFSSSGSERERFGTPFAFVEFYDRRDADDAVLARDGYNYDGYRI 97
Query: 49 RVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGD 108
RVE G + S R S YRV+V+GLPS+ SWQDLKDHMR AGD
Sbjct: 98 RVEFPRGTKGFKGSRPRGPPPRR---------SSYRVIVSGLPSTGSWQDLKDHMREAGD 148
Query: 109 VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
VC++ V+RD TG+V++ +DMKYA+++LD ++FR + SY+RV+
Sbjct: 149 VCYADVYRDG---TGVVEFLRPEDMKYAVKQLDDTKFRSHEGDVSYIRVK 195
>gi|410976794|ref|XP_003994798.1| PREDICTED: serine/arginine-rich splicing factor 9 [Felis catus]
Length = 340
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 104/158 (65%), Gaps = 16/158 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL--AHGGRRHS 60
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +G R
Sbjct: 156 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGSR--- 212
Query: 61 SSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
+ GG G +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 213 ------GGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD-- 264
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 265 GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 301
>gi|159479816|ref|XP_001697982.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158273781|gb|EDO99567.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 320
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 97/158 (61%), Gaps = 7/158 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I ID+K P RPPG+AF+EFED R AE+A R R+ Y F G R+RVE+A GG +
Sbjct: 58 FGRIRMIDIKKPARPPGFAFVEFEDPRSAEEAARRRNNYEFAGMRMRVEIARGGEAAGAQ 117
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD-RGGM 121
Y R + +R+ V LP SASWQDLKD +RR +++VF+D R +
Sbjct: 118 QPLRIGY-----RPIRNTMGFRLYVKNLPRSASWQDLKDFVRRVCKPLYTEVFKDNRDNV 172
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS-YVRVRE 158
G+V++ S +DMK +RKLD +EF N F + YVR+ E
Sbjct: 173 VGVVEFESKEDMKATVRKLDDTEFANPFDKGHYVRLTE 210
>gi|12860555|dbj|BAB31986.1| unnamed protein product [Mus musculus]
Length = 190
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 104/158 (65%), Gaps = 16/158 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL--AHGGRRHS 60
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +GGR
Sbjct: 6 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGR--- 62
Query: 61 SSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
+ G G +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 63 ------GGWPRGARNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD-- 114
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 115 GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 151
>gi|74192738|dbj|BAE34886.1| unnamed protein product [Mus musculus]
Length = 222
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 104/158 (65%), Gaps = 16/158 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL--AHGGRRHS 60
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +GGR
Sbjct: 38 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGR--- 94
Query: 61 SSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
+ G G +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 95 ------GGWPRGARNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD-- 146
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 147 GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 183
>gi|13385016|ref|NP_079849.1| serine/arginine-rich splicing factor 9 [Mus musculus]
gi|66774167|sp|Q9D0B0.1|SRSF9_MOUSE RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|12847866|dbj|BAB27740.1| unnamed protein product [Mus musculus]
gi|15126569|gb|AAH12217.1| Splicing factor, arginine/serine rich 9 [Mus musculus]
gi|148687919|gb|EDL19866.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Mus
musculus]
Length = 222
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 104/158 (65%), Gaps = 16/158 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL--AHGGRRHS 60
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +GGR
Sbjct: 38 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGR--- 94
Query: 61 SSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
+ G G +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 95 ------GGWPRGARNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD-- 146
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 147 GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 183
>gi|355718943|gb|AES06437.1| splicing factor, arginine/serine-rich 9 [Mustela putorius furo]
Length = 220
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 104/158 (65%), Gaps = 16/158 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL--AHGGRRHS 60
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +G R
Sbjct: 37 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGSR--- 93
Query: 61 SSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
+ GG G +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 94 ------GGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD-- 145
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 146 GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|57164147|ref|NP_001009255.1| serine/arginine-rich splicing factor 9 [Rattus norvegicus]
gi|92058728|sp|Q5PPI1.1|SRSF9_RAT RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|56388745|gb|AAH87684.1| Splicing factor, arginine/serine rich 9 [Rattus norvegicus]
gi|149063569|gb|EDM13892.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Rattus
norvegicus]
Length = 221
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 103/157 (65%), Gaps = 14/157 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL--AHGGRRHS 60
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE A+GGR
Sbjct: 37 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRAYGGRGGW 96
Query: 61 SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
R +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D G
Sbjct: 97 PRASRNGP--------PTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--G 146
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
M G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 147 M-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|57105666|ref|XP_534706.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Canis
lupus familiaris]
Length = 221
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 104/158 (65%), Gaps = 16/158 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL--AHGGRRHS 60
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +G R
Sbjct: 37 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGSR--- 93
Query: 61 SSMDRYSSYSSGGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
+ GG G +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D
Sbjct: 94 ------GGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD-- 145
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 146 GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|149053805|gb|EDM05622.1| rCG34610, isoform CRA_a [Rattus norvegicus]
Length = 214
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 92/156 (58%), Gaps = 36/156 (23%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGR----- 93
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
LP S SWQDLKDHMR AGDVC++ V+RD T
Sbjct: 94 ---------------------------LPPSGSWQDLKDHMREAGDVCYADVYRD---GT 123
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
G+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 124 GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 159
>gi|159155810|gb|AAI54584.1| Zgc:77449 protein [Danio rerio]
Length = 246
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 99/160 (61%), Gaps = 7/160 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG-GRRHSS 61
YG I DI+LK +AF+ FED RDAEDA+ GR+GY F +LRVE G + S
Sbjct: 27 YGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNGYGFGDCKLRVEYPRSSGSKFSG 86
Query: 62 SMDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
R +RRS++RV+VTGLP + SWQDLKDHMR AGDVCF+ V RD
Sbjct: 87 PAGGGGGGGGPRGRFGPPTRRSEFRVIVTGLPPTGSWQDLKDHMREAGDVCFADVQRD-- 144
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
G+V++ +DM+YA+R+LD +EFR + +Y+RV E
Sbjct: 145 -GEGVVEFLRREDMEYALRRLDSTEFRSHQGETAYIRVME 183
>gi|291407986|ref|XP_002720309.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
Length = 343
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 106/168 (63%), Gaps = 22/168 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + D+DLK +AF+EF RDA +A+ GRDGY+++GYRLRVE R
Sbjct: 38 YGTVRDVDLKNRRWGRPFAFVEFNSPRDAHNAVHGRDGYDYEGYRLRVEFPRNYR----- 92
Query: 63 MDRYSSYSSGGSRGV-------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
+ Y GG RG+ SRRSD RVLV+GLP S SWQDLKDHMR AG VC++ V
Sbjct: 93 ----AIY--GGGRGLLETRGTSSRRSDNRVLVSGLPPSGSWQDLKDHMREAGYVCYAAVR 146
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSR 162
RD +G+V++ +DM YA+RKL+ ++FR + +Y+RVR ++R
Sbjct: 147 RD---GSGVVEFVWKEDMSYAVRKLNNTKFRSHKGETAYIRVRIDEAR 191
>gi|327282648|ref|XP_003226054.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Anolis
carolinensis]
Length = 245
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 102/155 (65%), Gaps = 8/155 (5%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DI+LK +AF+ FED RDAEDA+ GR+GY++ RLRVE + S
Sbjct: 59 YGRIRDIELKSKRGLVPFAFVRFEDPRDAEDAVYGRNGYDYGQCRLRVEFP----KPSRG 114
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+ G + SRRS++RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 115 RGGFGGGPRGRNGPPSRRSEFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM- 171
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
G+V++ +DM+YA+RKLD ++FR + SY+RV
Sbjct: 172 GVVEFLRKEDMEYALRKLDDTKFRSHEGETSYIRV 206
>gi|395833916|ref|XP_003789963.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1
[Otolemur garnettii]
gi|395833918|ref|XP_003789964.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2
[Otolemur garnettii]
Length = 221
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 101/155 (65%), Gaps = 10/155 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE R +
Sbjct: 37 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFP---RTYGGQ 93
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+G +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 94 GGWPRGGRNGPP---TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM- 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 148 GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|405968123|gb|EKC33223.1| Splicing factor, arginine/serine-rich 1 [Crassostrea gigas]
Length = 232
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 98/166 (59%), Gaps = 14/166 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I +DLK PP + F+EFED RDA DA+ RDGYN+DGY LRVE GG S
Sbjct: 30 FGKIAFVDLKTRRGPP-FCFVEFEDPRDASDAVHERDGYNYDGYTLRVEFPRGGGPGGSR 88
Query: 63 MDRYSSYSSGGSRGVSRRS---------DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 113
+YRVLV+GLP S SWQDLKDHMR AGDVC++
Sbjct: 89 SRGGGGGYGFRGGRGPPGGRGGPPSRRSEYRVLVSGLPPSGSWQDLKDHMREAGDVCYTD 148
Query: 114 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
V++D TG+V++ +DMK+A+ KLD ++FR + SY+RV+E
Sbjct: 149 VYKD---GTGVVEFLRKEDMKHAVSKLDDTKFRSHEGEVSYIRVKE 191
>gi|213515460|ref|NP_001133886.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|209155694|gb|ACI34079.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|223649152|gb|ACN11334.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
Length = 252
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 128/247 (51%), Gaps = 35/247 (14%)
Query: 3 YGPIVDIDLK-----IPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG-G 56
YG I DI+LK IP +AF+ FED RDAEDA+ GR+GY +LRVE G
Sbjct: 27 YGKIRDIELKNNRGTIP-----FAFVRFEDPRDAEDAVYGRNGYGLGDSKLRVEYPRSSG 81
Query: 57 RRHSSSMDRYSSYSSGGSRGV----SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
+ S M GG +G +RRS++RV+VTGLP S SWQDLKDHMR AGDVCF+
Sbjct: 82 AKFSGPMGGGERGEGGGPKGRFGPPTRRSEFRVIVTGLPPSGSWQDLKDHMREAGDVCFA 141
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSR 171
V RD G+V++ +DM+YA+R+LDR+EFR + + +RV
Sbjct: 142 DVQRD---GEGVVEFVRREDMEYALRRLDRTEFRSHQGEMANIRVHGEHGASYGRSQSRS 198
Query: 172 SPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR--SASQRSPS 229
R S PY SR P R S PR SR SP PAR + SP
Sbjct: 199 RSPRGRGYSPPPYKSRGSPPQRYQS--------PPRRHVSRHSP---PARRHPVTHHSP- 246
Query: 230 GSPPRSF 236
PPR +
Sbjct: 247 --PPRHY 251
>gi|428673079|gb|EKX73992.1| pre-mRNA splicing factor, putative [Babesia equi]
Length = 325
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 104/180 (57%), Gaps = 10/180 (5%)
Query: 3 YGPIVDIDLKIPPRP--PGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YG I DID+K YAF+EFE R AEDA+ RDGY FD YRLRVE A G + S
Sbjct: 36 YGEIRDIDIKHGKTSNYTSYAFIEFESVRSAEDAVECRDGYEFDRYRLRVEFA--GEKKS 93
Query: 61 SSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
R SSY GSR R+DYR++++ LP WQ LKDHMR+AG V + + RG
Sbjct: 94 RRHPR-SSYEDRGSRYPPPTRTDYRLVISNLPHGCRWQHLKDHMRKAGPVGYVNIQHGRG 152
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
VD+ DMKYA+RKLD +E + + +R+++ D RRS SR R +SR R
Sbjct: 153 ----YVDFMHKSDMKYALRKLDGTELSTSEDSARIRIKKDDYRRSRSRDAYRRRSHSRGR 208
>gi|444723179|gb|ELW63840.1| Serine/arginine-rich splicing factor 9 [Tupaia chinensis]
Length = 235
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 101/155 (65%), Gaps = 10/155 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +
Sbjct: 51 YGRIREIELKNQHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TY 104
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G + +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 105 GGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM- 161
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 162 GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 196
>gi|426247382|ref|XP_004017465.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Ovis
aries]
Length = 226
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 101/155 (65%), Gaps = 10/155 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +
Sbjct: 37 YGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G S +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 91 GGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM- 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 148 GMVEYLRKEDMEYALRKLDETKFRSHEGETSYIRV 182
>gi|134085783|ref|NP_001076867.1| serine/arginine-rich splicing factor 9 [Bos taurus]
gi|358421698|ref|XP_003585083.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Bos taurus]
gi|133777441|gb|AAI14700.1| SFRS9 protein [Bos taurus]
gi|296478484|tpg|DAA20599.1| TPA: splicing factor, arginine/serine-rich 9 [Bos taurus]
Length = 221
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 101/155 (65%), Gaps = 10/155 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +
Sbjct: 37 YGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G S +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 91 GGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM- 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 148 GMVEYLRKEDMEYALRKLDETKFRSHEGETSYIRV 182
>gi|449480417|ref|XP_002196866.2| PREDICTED: serine/arginine-rich splicing factor 1 [Taeniopygia
guttata]
Length = 210
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 89/132 (67%), Gaps = 6/132 (4%)
Query: 29 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV--SRRSDYRVL 86
RDAEDA+ GRDGY++DGYRLRVE GR + R SRRS+YRV+
Sbjct: 22 RDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSEYRVI 81
Query: 87 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 146
V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+RKLD ++FR
Sbjct: 82 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD---GTGVVEFVRKEDMTYAVRKLDNTKFR 138
Query: 147 -NAFSRSYVRVR 157
+ +Y+RV+
Sbjct: 139 SHEGETAYIRVK 150
>gi|449529130|ref|XP_004171554.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 158
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 67/75 (89%)
Query: 86 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+V GLPSSASWQDLKDHMR+AGDVCF++V RD G GIVDYT+YDDMKYAIRKLD +EF
Sbjct: 1 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEF 60
Query: 146 RNAFSRSYVRVREYD 160
RN ++R+Y+RV++YD
Sbjct: 61 RNPWARAYIRVKKYD 75
>gi|397525476|ref|XP_003832692.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan paniscus]
Length = 274
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +
Sbjct: 90 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TY 143
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G + +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 144 GGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM- 202
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 203 --VEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 235
>gi|296490264|tpg|DAA32377.1| TPA: splicing factor, arginine/serine-rich 9-like [Bos taurus]
Length = 221
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 101/155 (65%), Gaps = 10/155 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDAEDA+ GR+GY++ RLRVE +
Sbjct: 37 YGHISEIELKNRHGLVPFAFVRFEDPRDAEDAVYGRNGYDYGQCRLRVEFPR------TY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G S +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 91 GGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM- 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 148 GMVEYLRKEDMEYALRKLDETKFRSHEGETSYIRV 182
>gi|387219571|gb|AFJ69494.1| splicing factor, arginine/serine-rich 1/9 [Nannochloropsis gaditana
CCMP526]
Length = 277
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 95/155 (61%), Gaps = 12/155 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ID+K P RPP YAF+ FED RDA+DA+ RD Y+FDG R+RVELA+ R
Sbjct: 26 YGRIRGIDIKRPSRPPAYAFVAFEDPRDAKDAVHYRDNYDFDGGRIRVELANETPR---- 81
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R GG R R+D+R+ V+ LP SWQDLKD+ + GDV ++ V R+
Sbjct: 82 --RRDDRGFGGGRN---RTDFRLEVSDLPDRTSWQDLKDYFKPVGDVLYADVSRN---GE 133
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 157
G+V++ + +DM A RKLD S FRN F +RVR
Sbjct: 134 GVVEFATKEDMFAAKRKLDGSTFRNPFDSREIRVR 168
>gi|384950066|gb|AFI38638.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 221
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +
Sbjct: 37 YGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G + +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 91 GGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM- 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 150 --VEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|307078155|ref|NP_001182495.1| splicing factor, arginine/serine-rich 9 [Sus scrofa]
Length = 221
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 101/155 (65%), Gaps = 10/155 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +
Sbjct: 37 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G + +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 91 GGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM- 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 148 GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|348585449|ref|XP_003478484.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Cavia
porcellus]
gi|351702214|gb|EHB05133.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 221
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 101/155 (65%), Gaps = 10/155 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +
Sbjct: 37 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G + +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 91 GGRGGWPRGGRTGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM- 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 148 GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|417397369|gb|JAA45718.1| Putative splicing factor arginine/serine-rich 9-like protein
[Desmodus rotundus]
gi|431914272|gb|ELK15530.1| Splicing factor, arginine/serine-rich 9 [Pteropus alecto]
Length = 221
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 101/155 (65%), Gaps = 10/155 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +
Sbjct: 37 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G + +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 91 GGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM- 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 148 GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|334327169|ref|XP_003340840.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 9-like [Monodelphis domestica]
Length = 220
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 112/198 (56%), Gaps = 26/198 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DI+LK +AF+ FED RDAEDAI GR+GY++ RLRVEL
Sbjct: 39 YGRIRDIELKNRRGLAPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVELPRNPGGGGPR 98
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
SRRS++RVLV+GLP S SWQDLKDHMR AG VC++ V +D GM
Sbjct: 99 GRTGPP---------SRRSEFRVLVSGLPPSGSWQDLKDHMREAGGVCYADVQKD--GM- 146
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSR--------SP 173
G+V++ +DM+YA+R+LD S+FR + SY+RV Y R + SP
Sbjct: 147 GVVEFLRKEDMEYALRRLDDSKFRSHEGETSYIRV--YPERSTSYGYSRSRSGSRGRDSP 204
Query: 174 YYSRSRSRSPYYSRSRSP 191
Y SR SPYY+ +P
Sbjct: 205 YQSRG---SPYYTSPYAP 219
>gi|198436398|ref|XP_002124933.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1,
partial [Ciona intestinalis]
Length = 166
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 91/129 (70%), Gaps = 7/129 (5%)
Query: 30 DAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTG 89
DA+DA+R R+GYNFDGY+L+VE R S R S+Y G S+R++YRV+V G
Sbjct: 1 DADDAVRARNGYNFDGYKLKVERP---RSSSGFQGRPSNYIRGRPGPPSKRTEYRVIVEG 57
Query: 90 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NA 148
LP S SWQDLKDHMR AGDVC++ V+RD +G+V++ + +DMK+A++ +D ++FR +
Sbjct: 58 LPGSGSWQDLKDHMREAGDVCYADVYRD---GSGVVEFVNKEDMKFALKHMDDTKFRSHE 114
Query: 149 FSRSYVRVR 157
SY+RV+
Sbjct: 115 GETSYIRVK 123
>gi|340371197|ref|XP_003384132.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Amphimedon
queenslandica]
Length = 242
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 103/163 (63%), Gaps = 11/163 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL------AHGG 56
YG +VD+DL P +AF+EFED RDA+DAIRGRDGY FDGY+LRVEL GG
Sbjct: 32 YGKLVDVDLHDRRETP-FAFIEFEDPRDADDAIRGRDGYMFDGYKLRVELPRSSPRYVGG 90
Query: 57 RRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
R G RG R+S +++++TGLP + SWQD+KDH R+AGDV ++ V R
Sbjct: 91 RGGGGRGYYGGGRRDGYGRGGGRQSGHKLMITGLPPTGSWQDIKDHFRQAGDVIYANVER 150
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS-YVRVRE 158
D TG+V++ Y+ K A+R LD S+FR+ S Y+RV E
Sbjct: 151 D---GTGVVEFARYEHAKRAVRDLDDSKFRSHEGESAYIRVSE 190
>gi|148669918|gb|EDL01865.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_c
[Mus musculus]
Length = 212
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 92/156 (58%), Gaps = 38/156 (24%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF---------- 88
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
RR LP S SWQDLKDHMR AGDVC++ V+RD T
Sbjct: 89 ---------------PRR---------LPPSGSWQDLKDHMREAGDVCYADVYRD---GT 121
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
G+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 122 GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 157
>gi|4506903|ref|NP_003760.1| serine/arginine-rich splicing factor 9 [Homo sapiens]
gi|114647286|ref|XP_001160785.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Pan
troglodytes]
gi|297693182|ref|XP_002823915.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pongo abelii]
gi|332262536|ref|XP_003280317.1| PREDICTED: serine/arginine-rich splicing factor 9 [Nomascus
leucogenys]
gi|402887863|ref|XP_003907300.1| PREDICTED: serine/arginine-rich splicing factor 9 [Papio anubis]
gi|410047369|ref|XP_003952371.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|3929377|sp|Q13242.1|SRSF9_HUMAN RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Pre-mRNA-splicing factor SRp30C; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|1049078|gb|AAA93069.1| SRp30c [Homo sapiens]
gi|4099429|gb|AAD00626.1| splicing factor SRp30c [Homo sapiens]
gi|62739648|gb|AAH93973.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|62740064|gb|AAH93971.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|119618600|gb|EAW98194.1| splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|261861074|dbj|BAI47059.1| splicing factor, arginine/serine-rich 9 [synthetic construct]
gi|380817540|gb|AFE80644.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|383422449|gb|AFH34438.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|410227624|gb|JAA11031.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227626|gb|JAA11032.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227628|gb|JAA11033.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263740|gb|JAA19836.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263742|gb|JAA19837.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263744|gb|JAA19838.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305344|gb|JAA31272.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305346|gb|JAA31273.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305348|gb|JAA31274.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340983|gb|JAA39438.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340985|gb|JAA39439.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
Length = 221
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +
Sbjct: 37 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G + +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 91 GGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM- 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 150 --VEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|268561908|ref|XP_002646556.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae]
Length = 308
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 91/155 (58%), Gaps = 15/155 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +D+K + F++F D RDA+DA+RGRDGY+FDG R+RVEL G
Sbjct: 30 YGRINKVDVKSGRGGAAFGFVQFSDSRDADDAVRGRDGYDFDGKRIRVELTRGSGPRGPG 89
Query: 63 MD------------RYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
R Y S G RRS+ R ++ GLP + SWQD+KDH++ AGD+C
Sbjct: 90 GRPVRDGYDRGYDRRDDGYGRRQSHGPPRRSENRAIIEGLPPTGSWQDIKDHLKSAGDIC 149
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ V R+ GIV++ ++DMKYAI+K D ++F
Sbjct: 150 YADVGRN---GDGIVEFEKHEDMKYAIKKFDDTKF 181
>gi|426247384|ref|XP_004017466.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Ovis
aries]
Length = 200
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 95/144 (65%), Gaps = 9/144 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +
Sbjct: 37 YGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G S +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 91 GGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM- 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
G+V+Y +DM+YA+RKLD ++FR
Sbjct: 148 GMVEYLRKEDMEYALRKLDETKFR 171
>gi|351700803|gb|EHB03722.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 266
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 117/194 (60%), Gaps = 18/194 (9%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I+LK +AF+ F+D RDAEDAI GR+GY++ RLRVE +
Sbjct: 83 GRICEIELKNRHGLVPFAFVRFKDPRDAEDAICGRNGYDYGQCRLRVEFPR------TYG 136
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTG 123
R G + +R SD+RVLV+GLP S SWQDLKDH+ AGDVC++ V +D GM G
Sbjct: 137 GRGGCPRGGRTGAPARGSDFRVLVSGLPPSGSWQDLKDHIPEAGDVCYADVQKD--GM-G 193
Query: 124 IVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV---REYDSRRSYSRSPSR---SPYYS 176
+V++ +DM YA+RKLD ++FR + SY+RV R S+SRS SR SPY
Sbjct: 194 MVEHLRKEDMDYALRKLDDTKFRSHEGETSYIRVYPERNTSYCYSWSRSGSRDLDSPY-- 251
Query: 177 RSRSRSPYYSRSRS 190
+SR PY+S RS
Sbjct: 252 QSRGSPPYFSPFRS 265
>gi|158254720|dbj|BAF83333.1| unnamed protein product [Homo sapiens]
Length = 221
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +
Sbjct: 37 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G + +RRSD+RVLV+GLP S SWQDLKDHMR AGD C++ V +D GM
Sbjct: 91 GGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDACYADVQKDGVGM- 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 150 --VEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|52345494|ref|NP_001004795.1| serine/arginine-rich splicing factor 9 [Xenopus (Silurana)
tropicalis]
gi|49257722|gb|AAH74531.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
gi|89272901|emb|CAJ83204.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
Length = 225
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 99/161 (61%), Gaps = 18/161 (11%)
Query: 3 YGPIVDIDLK------IPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGG 56
YG I I+LK P +AF+ F+D RDAEDA+ R+GY F RLRVE
Sbjct: 39 YGRIRTIELKNRGGSSAAP----FAFISFQDPRDAEDAVFARNGYEFGSCRLRVEFP--- 91
Query: 57 RRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
R S G + SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ V +
Sbjct: 92 -RSFRGSGGGYGGSRGRNGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVHK 150
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
D GM GIV++ +DM+YA+RKLD ++FR + SY+RV
Sbjct: 151 D--GM-GIVEFIRKEDMEYALRKLDDTKFRSHEGETSYIRV 188
>gi|221130501|ref|XP_002159641.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Hydra
magnipapillata]
Length = 265
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 100/163 (61%), Gaps = 12/163 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL---AHGGRRH 59
YGPI ID+ P +AFLEFED RDA DA+ G+DG F+G R+RV+ + GR
Sbjct: 35 YGPIKAIDIH-NRFDPAFAFLEFEDPRDASDAVYGKDGERFEGQRIRVQFPRNSAAGRER 93
Query: 60 SSSMDRYSSYSSGGSRGVS----RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
+ S + RRS+ RVLV+GLP + SWQDLKDHMR AG+V ++ V+
Sbjct: 94 TESGSNNNGGGGYVRGRGRGPPIRRSENRVLVSGLPPTGSWQDLKDHMREAGEVLYADVY 153
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
+D T + ++ +Y+DMK+A++ LD S+F+ + ++VRV+
Sbjct: 154 KDG---TAVCEFANYEDMKWAVKYLDDSKFKSHENETTFVRVK 193
>gi|348532825|ref|XP_003453906.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Oreochromis
niloticus]
Length = 241
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 108/192 (56%), Gaps = 10/192 (5%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDA+DA+ GR+GY + +LRVE R
Sbjct: 27 YGKIREIELKNNRGTIPFAFVRFEDPRDADDAVYGRNGYGYGDSKLRVEYP---RSKPGP 83
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
M G +RRS++RV+V+GLP S SWQDLKDHMR AGDVCF+ V RD
Sbjct: 84 MGGGGGAPRGRFGPPTRRSEFRVIVSGLPPSGSWQDLKDHMREAGDVCFADVQRD---GE 140
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 181
G+V++ +DM+YA+R+LD +EFR + +Y+RV E R
Sbjct: 141 GVVEFLRREDMEYALRRLDGTEFRSHQGETAYIRVYE---ERGTPNWDRSRSRSRSRGRY 197
Query: 182 SPYYSRSRSPSR 193
SPYY+R P+R
Sbjct: 198 SPYYNRRSPPAR 209
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 96/162 (59%), Gaps = 26/162 (16%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ID+K R P +AF+EFED RDAEDA+R RDGY FDG R+RVE G
Sbjct: 31 YGRIKYIDVK-SGRGPAFAFIEFEDNRDAEDAVRARDGYEFDGRRIRVEFTRG------- 82
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVT-----GLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
G RG +S + + T + +DLKDHMR AGDVC++ V RD
Sbjct: 83 ---------VGPRGPVAQSTRKEVATVEAVTIVEDVVVVKDLKDHMREAGDVCYADVARD 133
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
TG+V++T YDD+KYAIRKLD ++FR + +Y+RVRE
Sbjct: 134 ---GTGVVEFTRYDDVKYAIRKLDDTKFRSHEGETAYIRVRE 172
>gi|148228289|ref|NP_001088400.1| serine/arginine-rich splicing factor 9 [Xenopus laevis]
gi|54261635|gb|AAH84289.1| LOC495254 protein [Xenopus laevis]
Length = 230
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 92/140 (65%), Gaps = 6/140 (4%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-- 77
+AF+ ++D RDAEDA+ GR+GY+F RLRVE R Y R
Sbjct: 57 FAFISYQDPRDAEDAVFGRNGYDFGSCRLRVEFPRSFRGSGGGGGGGGGYGGSRGRNGPP 116
Query: 78 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 137
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ V +D GM GIV++ +DM+YA+
Sbjct: 117 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVHKD--GM-GIVEFIRKEDMEYAL 173
Query: 138 RKLDRSEFR-NAFSRSYVRV 156
RKLD ++FR + SY+RV
Sbjct: 174 RKLDDTKFRSHEGETSYIRV 193
>gi|296213104|ref|XP_002753142.1| PREDICTED: serine/arginine-rich splicing factor 9, partial
[Callithrix jacchus]
Length = 167
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 90/137 (65%), Gaps = 10/137 (7%)
Query: 21 AFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRR 80
AF+ FED RDAEDAI GR+GY++ RLRVE + R G + +RR
Sbjct: 1 AFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRR 54
Query: 81 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 140
SD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+RKL
Sbjct: 55 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKL 111
Query: 141 DRSEFR-NAFSRSYVRV 156
D ++FR + SY+RV
Sbjct: 112 DDTKFRSHEGETSYIRV 128
>gi|357511861|ref|XP_003626219.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501234|gb|AES82437.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 168
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/68 (85%), Positives = 64/68 (94%), Gaps = 1/68 (1%)
Query: 103 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSR 162
MRRAGDVCFSQVFRDRGGMTGIV+YT+Y+DMKYAIRKLD SEFRNAFS +Y+RVREYD R
Sbjct: 1 MRRAGDVCFSQVFRDRGGMTGIVEYTNYEDMKYAIRKLDDSEFRNAFSWAYIRVREYD-R 59
Query: 163 RSYSRSPS 170
R Y+RSPS
Sbjct: 60 RRYTRSPS 67
>gi|344295340|ref|XP_003419370.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Loxodonta africana]
Length = 174
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 89/138 (64%), Gaps = 10/138 (7%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR 79
+AF+ FE RDAEDAI GR+GY++ RLRVE + +R
Sbjct: 7 FAFVRFETPRDAEDAIYGRNGYDYGQCRLRVEFPRAYGGRGGWPRGGRNGPP------TR 60
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
RSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RK
Sbjct: 61 RSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRK 117
Query: 140 LDRSEFR-NAFSRSYVRV 156
LD ++FR + SY+RV
Sbjct: 118 LDDTKFRSHEGETSYIRV 135
>gi|242011682|ref|XP_002426576.1| Splicing factor, arginine/serine-rich, putative [Pediculus humanus
corporis]
gi|212510716|gb|EEB13838.1| Splicing factor, arginine/serine-rich, putative [Pediculus humanus
corporis]
Length = 176
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 86/130 (66%), Gaps = 9/130 (6%)
Query: 35 IRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV-----SRRSDYRVLVTG 89
+ RDGY++DGYRLRVE GG S +R S G G +RRS +RVLVTG
Sbjct: 1 VHARDGYDYDGYRLRVEFPRGGGPGSYRGNRSGGSSGGDRGGGRRGPPARRSQFRVLVTG 60
Query: 90 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NA 148
LP S SWQDLKDHMR AGDVCF+ VF+D TG+V++ +DMKYA++KLD S FR +
Sbjct: 61 LPPSGSWQDLKDHMREAGDVCFADVFKD---GTGVVEFLRLEDMKYAVKKLDDSRFRSHE 117
Query: 149 FSRSYVRVRE 158
SYVRV+E
Sbjct: 118 GEVSYVRVKE 127
>gi|354497469|ref|XP_003510842.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Cricetulus griseus]
Length = 201
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 89/131 (67%), Gaps = 16/131 (12%)
Query: 30 DAEDAIRGRDGYNFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV-SRRSDYRVL 86
DAEDAI GR+GY++ RLRVE +GGR + + G G +RRSD+RVL
Sbjct: 44 DAEDAIYGRNGYDYGQCRLRVEFPRTYGGR---------AGWPRGARNGPPTRRSDFRVL 94
Query: 87 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 146
V+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR
Sbjct: 95 VSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFR 151
Query: 147 -NAFSRSYVRV 156
+ SY+RV
Sbjct: 152 SHEGETSYIRV 162
>gi|326433655|gb|EGD79225.1| splicing factor [Salpingoeca sp. ATCC 50818]
Length = 255
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 95/153 (62%), Gaps = 21/153 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I +I +K P YAF+ FED RDAEDA+R RDGY F G RLRVE A+GGRR
Sbjct: 27 FGRIEEITIKGP-----YAFVSFEDSRDAEDAVRRRDGYEFGGGRLRVEFANGGRRER-- 79
Query: 63 MDRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
G+R + + S++R+ V+ LP +ASWQD+KD R AG+V F++VF D
Sbjct: 80 ----------GARAFNGQHSEFRLRVSNLPRTASWQDVKDFCREAGEVLFAEVFHD---G 126
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 154
TG+V++ DDM++A+R L+ + R+ S +
Sbjct: 127 TGLVEFRREDDMEWALRNLNERKLRSHLGDSDI 159
>gi|297693630|ref|XP_002824116.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Pongo
abelii]
Length = 221
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 96/155 (61%), Gaps = 10/155 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +++LK +AF+ ED RDAEDAI GR+GY++ RLRVE +
Sbjct: 37 YGRIREMELKNRHGLVPFAFVRLEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G + +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 91 GGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVRKDGVGM- 149
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
V+Y +DM+YA+RKL ++F + SY+RV
Sbjct: 150 --VEYLRKEDMEYALRKLHDTKFHSHEGETSYIRV 182
>gi|399218146|emb|CCF75033.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/208 (42%), Positives = 119/208 (57%), Gaps = 31/208 (14%)
Query: 3 YGPIVDIDLKIPPRP--PGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
+G I DID+K YAF+EF RDAEDA+ RDGYNFD YRLRVE + GR+ S
Sbjct: 37 FGEIRDIDIKKGKTSNYTAYAFIEFYHMRDAEDAVESRDGYNFDKYRLRVEFS--GRKRS 94
Query: 61 SS----MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
+ + RY+ YS+ R+++R++++ + SS WQD+KDHM+RAG V +
Sbjct: 95 GNQGDKLRRYNDYSN-------TRTEHRLVISNISSSCRWQDIKDHMKRAGPVGHVCIKD 147
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY-VRVREYDSRRSYSRSPSRS--- 172
RG V+Y + DMKYA+ K D SE ++A RSY ++VR D RS+S S RS
Sbjct: 148 GRG----YVEYINKSDMKYALEKYDGSELQSA-GRSYRIKVR-MDDHRSHSHSNERSRRS 201
Query: 173 ------PYYSRSRSRSPYYSRSRSPSRS 194
SRSRSRSP + PS S
Sbjct: 202 ASQNKSLRRSRSRSRSPQINEPEVPSES 229
>gi|237841065|ref|XP_002369830.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211967494|gb|EEB02690.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 512
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 96/162 (59%), Gaps = 12/162 (7%)
Query: 3 YGPIVDIDLKIP-PRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
+G I DI+++ AF++F +Y+ A+DAI GRDG + +R+R+E + R
Sbjct: 43 FGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDGAHLGFHRIRIERSRQRLRRPG 102
Query: 62 SMDRYSSYS-------SGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
R +G + G RRS++RV V GLP +ASWQDLKDHMRRAGDV ++ +
Sbjct: 103 EFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPTASWQDLKDHMRRAGDVGYANI 162
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 156
G G+V+Y++ DDM YA+RKL S FRN F + +RV
Sbjct: 163 ----EGGVGVVEYSNGDDMDYALRKLHGSVFRNIFHTAKIRV 200
>gi|49037494|gb|AAT49042.1| splice factor [Toxoplasma gondii]
Length = 345
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 101/174 (58%), Gaps = 13/174 (7%)
Query: 3 YGPIVDIDLKIP-PRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
+G I DI+++ AF++F +Y+ A+DAI GRDG + +R+R+E + R
Sbjct: 43 FGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDGAHLGFHRIRIERSRQRLRRPG 102
Query: 62 SMDRYSSYS-------SGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
R +G + G RRS++RV V GLP +ASWQDLKDHMRRAGDV ++ +
Sbjct: 103 EFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPTASWQDLKDHMRRAGDVGYANI 162
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRS 168
G G+V+Y++ DDM YA+RKL S FRN F + +RV E D+ R R
Sbjct: 163 ----EGGVGVVEYSNGDDMDYALRKLHGSVFRNIFHTAKIRV-ERDTERGKPRE 211
>gi|221483656|gb|EEE21968.1| hypothetical protein TGGT1_121760 [Toxoplasma gondii GT1]
Length = 513
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 96/162 (59%), Gaps = 12/162 (7%)
Query: 3 YGPIVDIDLKIP-PRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
+G I DI+++ AF++F +Y+ A+DAI GRDG + +R+R+E + R
Sbjct: 43 FGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDGAHLGFHRIRIERSRQRLRRPG 102
Query: 62 SMDRYSSYS-------SGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
R +G + G RRS++RV V GLP +ASWQDLKDHMRRAGDV ++ +
Sbjct: 103 EFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPTASWQDLKDHMRRAGDVGYANI 162
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 156
G G+V+Y++ DDM YA+RKL S FRN F + +RV
Sbjct: 163 ----EGGVGVVEYSNGDDMDYALRKLHGSVFRNIFHTAKIRV 200
>gi|221504321|gb|EEE29996.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
VEG]
Length = 513
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 96/162 (59%), Gaps = 12/162 (7%)
Query: 3 YGPIVDIDLKIP-PRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
+G I DI+++ AF++F +Y+ A+DAI GRDG + +R+R+E + R
Sbjct: 43 FGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDGAHLGFHRIRIERSRQRLRRPG 102
Query: 62 SMDRYSSYS-------SGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
R +G + G RRS++RV V GLP +ASWQDLKDHMRRAGDV ++ +
Sbjct: 103 EFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPTASWQDLKDHMRRAGDVGYANI 162
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 156
G G+V+Y++ DDM YA+RKL S FRN F + +RV
Sbjct: 163 ----EGGVGVVEYSNGDDMDYALRKLHGSVFRNIFHTAKIRV 200
>gi|159463554|ref|XP_001690007.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283995|gb|EDP09745.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 338
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 65/83 (78%)
Query: 76 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 135
G SRR+D+RV+VT LP S SWQDLKDHMRRAG+V FSQV RD GM G++DY + D++
Sbjct: 162 GPSRRTDFRVIVTNLPLSCSWQDLKDHMRRAGEVTFSQVMRDGRGMLGLIDYATRSDLEL 221
Query: 136 AIRKLDRSEFRNAFSRSYVRVRE 158
A+RKLD SEF+N + + +RVRE
Sbjct: 222 ALRKLDDSEFKNPYDTARIRVRE 244
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR 57
YG I +DLKI PRPP +AF+EFED RDA DA+RGRDG F G RLRVE++HG R
Sbjct: 27 YGRIRSVDLKIGPRPPAFAFVEFEDERDAADAVRGRDGIEFQGQRLRVEVSHGRR 81
>gi|296004548|ref|XP_001351730.2| splicing factor, putative [Plasmodium falciparum 3D7]
gi|225631680|emb|CAD51537.2| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 298
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 82/144 (56%), Gaps = 3/144 (2%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+ D+K +AF+EFED RDA DAI+ +DG +F+G +LRVE+ R +
Sbjct: 31 YGNILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGCDFEGNKLRVEVPFNARENGRY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R SRR Y V VTGLP S SWQDLKDH+R AG+ + VF+D T
Sbjct: 91 NARGGGRGMMHRGPKSRRGRYVVEVTGLPISGSWQDLKDHLREAGECGHADVFKD---GT 147
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
G V + + DDM AI K + S FR
Sbjct: 148 GEVSFFNKDDMLEAIDKFNGSIFR 171
>gi|399216785|emb|CCF73472.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 87/139 (62%), Gaps = 21/139 (15%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV 77
YA++EF+ +DAI+ RDGY F YR+ V++ GG+ SRG
Sbjct: 48 YAYIEFDSSSSVDDAIKYRDGYKFGRYRIFVDILREKGGK---------------SSRGP 92
Query: 78 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 137
R+DYRV+V LPSSASWQDLKDHMR+AG V +S V R + G V+Y + DM++A+
Sbjct: 93 PMRTDYRVIVDNLPSSASWQDLKDHMRKAGPVGYSSVNRGK----GYVEYETKKDMEWAL 148
Query: 138 RKLDRSEFRNAFSRSYVRV 156
LD+SEF+N +S+S +RV
Sbjct: 149 ENLDKSEFKNIYSKSIIRV 167
>gi|440909520|gb|ELR59420.1| Serine/arginine-rich splicing factor 9, partial [Bos grunniens
mutus]
Length = 159
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 86/129 (66%), Gaps = 10/129 (7%)
Query: 29 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 88
RDAEDAI GR+GY++ RLRVE + R G S +RRSD+RVLV+
Sbjct: 1 RDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRSGPPTRRSDFRVLVS 54
Query: 89 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 147
GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR +
Sbjct: 55 GLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDETKFRSH 111
Query: 148 AFSRSYVRV 156
SY+RV
Sbjct: 112 EGETSYIRV 120
>gi|338727750|ref|XP_001488704.3| PREDICTED: serine/arginine-rich splicing factor 9 [Equus caballus]
Length = 289
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 90/145 (62%), Gaps = 16/145 (11%)
Query: 19 GYAFLEFEDYR------DAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG 72
G+ FLE DAEDAI GR+GY++ RLRVE + R G
Sbjct: 115 GWWFLEATALSWSLPSGDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGG 168
Query: 73 GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 132
+ +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +D
Sbjct: 169 RNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKED 225
Query: 133 MKYAIRKLDRSEFR-NAFSRSYVRV 156
M+YA+RKLD ++FR + SY+RV
Sbjct: 226 MEYALRKLDDTKFRSHEGETSYIRV 250
>gi|395513899|ref|XP_003761159.1| PREDICTED: serine/arginine-rich splicing factor 9 [Sarcophilus
harrisii]
Length = 274
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 96/171 (56%), Gaps = 26/171 (15%)
Query: 30 DAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTG 89
DAEDAI GR+GY++ RLRVEL SRRS+YRVLV+G
Sbjct: 120 DAEDAIYGRNGYDYGQCRLRVELPRNPGGGGPRGRTGPP---------SRRSEYRVLVSG 170
Query: 90 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NA 148
LP S SWQDLKDHMR AG VC++ V +D GM G+V++ +DM+YA+R+LD S+FR +
Sbjct: 171 LPPSGSWQDLKDHMREAGGVCYADVQKD--GM-GVVEFLRKEDMEYALRRLDDSKFRSHE 227
Query: 149 FSRSYVRVREYDSRRSYSRSPSR--------SPYYSRSRSRSPYYSRSRSP 191
SY+RV Y R + SPY SR SPYY+ +P
Sbjct: 228 GETSYIRV--YPERSTSYGYSRSRSGSRGRDSPYQSRG---SPYYTSPYAP 273
>gi|384950064|gb|AFI38637.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 96/155 (61%), Gaps = 15/155 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +
Sbjct: 37 YGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G + +RRSD+RVLV+G SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 91 GGRGGWPRGGRNGPPTRRSDFRVLVSG-----SWQDLKDHMREAGDVCYADVQKDGVGM- 144
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 145 --VEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 177
>gi|432092851|gb|ELK25217.1| Serine/arginine-rich splicing factor 9 [Myotis davidii]
Length = 199
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 83/129 (64%), Gaps = 10/129 (7%)
Query: 29 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 88
RDAEDA+ GR+GY++ RLRVE + +RRSD+RVLV+
Sbjct: 41 RDAEDAVYGRNGYDYGQCRLRVEFPRAYGGRGGWPRGGRNGPP------TRRSDFRVLVS 94
Query: 89 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 147
GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR +
Sbjct: 95 GLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSH 151
Query: 148 AFSRSYVRV 156
SY+RV
Sbjct: 152 EGETSYIRV 160
>gi|298710995|emb|CBJ32302.1| arginine/serine-rich splicing factor 6 [Ectocarpus siliculosus]
Length = 235
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 89/156 (57%), Gaps = 22/156 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ID+++ G+AF+EFED RDAEDA+ DG FDG R+ V+ G R
Sbjct: 26 YGRIEKIDVRM-----GFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRGHR----- 75
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
G + +RR+++R+ V GL S SWQDLKD R+AG V +S VF +G
Sbjct: 76 --------PNGPKFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRW 127
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 158
G+V+Y S DDMK AIR LD + Y+RVRE
Sbjct: 128 GVVEYVSRDDMKAAIRTLDDTR----LGGKYIRVRE 159
>gi|167515992|ref|XP_001742337.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778961|gb|EDQ92575.1| predicted protein [Monosiga brevicollis MX1]
Length = 164
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 88/140 (62%), Gaps = 19/140 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DI +K P YAF+ FED RDAEDA+ GRDG NF G RLRVEL++ GRR ++
Sbjct: 29 YGRILDIHIKGP-----YAFVTFEDERDAEDAVHGRDGINFAGGRLRVELSNPGRRGANP 83
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRA-GDVCFSQVFRDRGGM 121
D +S + S++RVL+ GLP +ASWQD+KD + DV F+ V RD GM
Sbjct: 84 RDNFS----------GKHSEFRVLIKGLPRTASWQDVKDFFKDERLDVVFTDVNRDGVGM 133
Query: 122 TGIVDYTSYDDMKYAIRKLD 141
++ + +DM +A+ K++
Sbjct: 134 A---EFGNQEDMNFALDKMN 150
>gi|383422447|gb|AFH34437.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 96/155 (61%), Gaps = 15/155 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK +AF+ FED RDAEDAI GR+GY++ RLRVE +
Sbjct: 37 YGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPR------TY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R G + +RRSD+RVLV+G SWQDLKDHMR AGDVC++ V +D GM
Sbjct: 91 GGRGGWPRGGRNGPPTRRSDFRVLVSG-----SWQDLKDHMREAGDVCYADVQKDGVGM- 144
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 156
V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 145 --VEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 177
>gi|221053983|ref|XP_002261739.1| pre-mRNA splicing factor [Plasmodium knowlesi strain H]
gi|193808199|emb|CAQ38902.1| pre-mRNA splicing factor, putative [Plasmodium knowlesi strain H]
Length = 495
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 94/159 (59%), Gaps = 15/159 (9%)
Query: 3 YGPIVDIDLKIPPRPPG----YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
YG I ID+K PR PG +AF+ + D RDAE AI RDGY +DG RLRVE + R
Sbjct: 36 YGRIKYIDVK-KPRAPGVPYSFAFVHYFDSRDAEYAIDRRDGYKYDGVRLRVEYSGENR- 93
Query: 59 HSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S +Y + G G R+++R++++ LP S WQ LKD MR+ GDV ++ V R +
Sbjct: 94 ---SYGKYRNKEEGT--GPPVRTEHRIIISNLPESCKWQHLKDVMRQCGDVGYANVERGK 148
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 157
G +V++ S DDM YAI K D SEF+ + ++VR
Sbjct: 149 G----VVEFISRDDMLYAIEKFDGSEFKVYDDVTNIKVR 183
>gi|401399758|ref|XP_003880627.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
gi|325115038|emb|CBZ50594.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
Length = 448
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 97/172 (56%), Gaps = 13/172 (7%)
Query: 3 YGPIVDIDLKIP-PRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
+G I DI+L+ AF++F DY+ A++AI GRDG +R+R+E + R
Sbjct: 44 FGRIEDIELRRDRTNDSTIAFVQFADYKAADEAIEGRDGTRLGFHRIRIERSRQRLRRPG 103
Query: 62 SMDRYSSYSSGGSR-------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
R G G RRS++RV V GLP +ASWQDLKDHMRRAGDV ++ +
Sbjct: 104 EFGRSDRSGYGREGGGSGPAYGPPRRSEFRVRVYGLPPTASWQDLKDHMRRAGDVGYANI 163
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYS 166
G G+V+Y++ DM YA+RKL S FRN F + +RV E DS YS
Sbjct: 164 ----DGGVGVVEYSNGSDMDYALRKLHGSVFRNIFHTAKIRV-ERDSAGDYS 210
>gi|427777415|gb|JAA54159.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 484
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 87/144 (60%), Gaps = 8/144 (5%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I ++ LK G+ F+EF+DYRDA+DA+ +G DG R+ VELAHG R
Sbjct: 25 FGKIREVLLK-----NGFGFVEFDDYRDADDAVYELNGRELDGERVVVELAHGTARRPPP 79
Query: 63 MDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
R + SG +R G R+DYRV++ L S SWQDLKD MR+ GDV ++ R R
Sbjct: 80 P-RSAWADSGTNRYGPPTRTDYRVIIENLSSRISWQDLKDRMRQVGDVTYADAHRHRRN- 137
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEF 145
G+V++ SY DMK AI KLD +E
Sbjct: 138 EGVVEFASYSDMKRAIEKLDNTEI 161
>gi|297263673|ref|XP_001089031.2| PREDICTED: splicing factor, arginine/serine-rich 9-like [Macaca
mulatta]
Length = 162
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 84/129 (65%), Gaps = 10/129 (7%)
Query: 29 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 88
RDAEDAI GR+GY++ RLRVE + R G + +RRSD+RVLV+
Sbjct: 4 RDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVS 57
Query: 89 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 147
GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+RKLD ++FR +
Sbjct: 58 GLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFRSH 114
Query: 148 AFSRSYVRV 156
SY+RV
Sbjct: 115 EGETSYIRV 123
>gi|355786589|gb|EHH66772.1| hypothetical protein EGM_03825, partial [Macaca fascicularis]
Length = 159
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 84/129 (65%), Gaps = 10/129 (7%)
Query: 29 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 88
RDAEDAI GR+GY++ RLRVE + R G + +RRSD+RVLV+
Sbjct: 1 RDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVS 54
Query: 89 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 147
GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+RKLD ++FR +
Sbjct: 55 GLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFRSH 111
Query: 148 AFSRSYVRV 156
SY+RV
Sbjct: 112 EGETSYIRV 120
>gi|124802534|ref|XP_001347501.1| pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
gi|23495082|gb|AAN35414.1|AE014832_36 pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
Length = 538
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 91/156 (58%), Gaps = 11/156 (7%)
Query: 3 YGPIVDIDLK-IPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
YG I ID+K YAF+ + D +DA+ AI RDGY FDG+RLRVE H G +
Sbjct: 35 YGRIKYIDIKPSRSSSSSYAFVHYYDLKDADYAIERRDGYKFDGFRLRVE--HSG--ENR 90
Query: 62 SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
S +Y G G R++ RV+VT LP + WQ LKD MR+ GDV ++ + R +
Sbjct: 91 SFGKYRKKDDGV--GPPIRTENRVIVTNLPDNCRWQHLKDIMRQCGDVGYANIERGK--- 145
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 157
GIV++ SYDDM YAI K D +EF+ + ++VR
Sbjct: 146 -GIVEFVSYDDMLYAIEKFDGAEFKVYDDVTNIKVR 180
>gi|156082103|ref|XP_001608544.1| pre-mRNA splicing factor [Plasmodium vivax Sal-1]
gi|148801115|gb|EDL42520.1| pre-mRNA splicing factor, putative [Plasmodium vivax]
Length = 544
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 93/159 (58%), Gaps = 15/159 (9%)
Query: 3 YGPIVDIDLKIPPRPPG----YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
+G I ID+K PR PG +AF+ + D RDAE AI RDGY +DG RLRVE +
Sbjct: 36 FGRIKYIDVK-KPRAPGVPYSFAFVHYFDSRDAEYAIDRRDGYKYDGVRLRVEYSG---- 90
Query: 59 HSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
+ S +Y G G R+++R++++ LP S WQ LKD MR+ GDV ++ + R R
Sbjct: 91 ENKSYGKYRKKEEGA--GPPVRTEHRIIISNLPESCKWQHLKDVMRQCGDVGYANIERGR 148
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 157
G +V++ S DDM YAI K D SEF+ + ++VR
Sbjct: 149 G----VVEFISRDDMLYAIEKFDGSEFKVYDDVTNIKVR 183
>gi|82540657|ref|XP_724630.1| splicing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23479337|gb|EAA16195.1| splicing factor, arginine/serine-rich 1 [Plasmodium yoelii yoelii]
Length = 309
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 83/144 (57%), Gaps = 5/144 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I+ D+K +AF+EFED RDA DAI+ +DG +F G +LRVE+ R +
Sbjct: 31 FGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGCDFGGNKLRVEVPFNARDNGKY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R GS+ SRR Y V V+GLP S SWQDLKDH+R AG+ + VF++ T
Sbjct: 91 NSRGRGMMGRGSK--SRRGRYVVEVSGLPLSGSWQDLKDHLREAGECGHADVFKN---GT 145
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
G V + +DM AI K + S FR
Sbjct: 146 GEVSFFHKEDMLEAIEKFNGSTFR 169
>gi|429329410|gb|AFZ81169.1| splicing factor 1, putative [Babesia equi]
Length = 207
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 88/157 (56%), Gaps = 16/157 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G IV +LK +AF+EF DYRDA DAI+ +DG F+G RLRVE+ +R S
Sbjct: 30 FGKIVYCELKRTVSGLPFAFVEFSDYRDARDAIKNKDGAEFNGKRLRVEVPFSSKRQSRR 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
D R+ Y V VTGLP + SWQDLKDH+R AG+ + VFR G
Sbjct: 90 SDP------------PRKGKYLVEVTGLPPTGSWQDLKDHLRAAGECGHANVFR---GGV 134
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
G V + S DM+YAI K D S F+ + ++ + VRE
Sbjct: 135 GEVSFFSRGDMEYAIDKFDGSTFKSHQGEKARITVRE 171
>gi|326932930|ref|XP_003212564.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 475
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 91/151 (60%), Gaps = 18/151 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR SS
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDSS- 78
Query: 63 MDRYSSYSSG-GSRGVSR-------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
Y S SG G R R R++YR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 79 ---YGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADA 135
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ R G++++ SY DMK A+ KLD +E
Sbjct: 136 HKGRKN-EGVIEFKSYSDMKRALEKLDGTEV 165
>gi|84998374|ref|XP_953908.1| splicing factor (SR protein) [Theileria annulata]
gi|65304906|emb|CAI73231.1| splicing factor (SR protein), putative [Theileria annulata]
Length = 341
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 89/164 (54%), Gaps = 17/164 (10%)
Query: 3 YGPIVDIDLK--IPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
+G I D+D+K YAF+EF R AEDA+ RDGY +D YRLRVE A G ++
Sbjct: 36 FGEIKDVDIKHGKTSNYTSYAFIEFASVRSAEDAVDSRDGYEYDRYRLRVEFA-GEKKPR 94
Query: 61 SSMDRYSSYSSGGSRGVSR------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
RY SY R S R+DYR++++ LP WQ LKDHMR+AG V + +
Sbjct: 95 ----RYPSYDRPRDRDRSNRYPPPTRTDYRLVISNLPHGCRWQHLKDHMRKAGPVGYVNI 150
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 158
+ G VDY DMKYAIRKLD SE +RV++
Sbjct: 151 VHGK----GFVDYMHKSDMKYAIRKLDGSELTTPDDSCRIRVKK 190
>gi|71033489|ref|XP_766386.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353343|gb|EAN34103.1| hypothetical protein TP01_0865 [Theileria parva]
Length = 343
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 89/164 (54%), Gaps = 17/164 (10%)
Query: 3 YGPIVDIDLK--IPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
+G I DID+K YAF+EF R AEDA+ RDGY +D YRLRVE A G +R
Sbjct: 36 FGEIKDIDIKHGKTSNYTSYAFIEFASVRSAEDAVDSRDGYEYDRYRLRVEFA-GEKRPR 94
Query: 61 SSMDRYSSYSSGGSRGVSR------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
RY SY R S R+DYR++++ LP WQ LKDHMR+AG V + +
Sbjct: 95 ----RYPSYERPRDRDRSNRYPPPTRTDYRLVISNLPHGCRWQHLKDHMRKAGPVGYVNI 150
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 158
+ G VD+ DMKYAIRKLD SE +RV++
Sbjct: 151 VHGK----GFVDFLHKSDMKYAIRKLDGSELSTPDDSCRIRVKK 190
>gi|165377173|ref|NP_065612.2| serine/arginine-rich splicing factor 4 [Mus musculus]
gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus]
gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus]
gi|148698178|gb|EDL30125.1| splicing factor, arginine/serine-rich 4 (SRp75) [Mus musculus]
Length = 491
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|338721826|ref|XP_001500325.3| PREDICTED: serine/arginine-rich splicing factor 4 [Equus caballus]
Length = 497
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 90/149 (60%), Gaps = 10/149 (6%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
M YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR
Sbjct: 19 MGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDG 73
Query: 61 SSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
S S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ +
Sbjct: 74 SYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK 133
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R G++++ SY DMK A+ KLD +E
Sbjct: 134 GRKN-EGVIEFVSYSDMKRALEKLDGTEV 161
>gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Splicing factor, arginine/serine-rich 4
gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|157822515|ref|NP_001102155.1| splicing factor, arginine/serine-rich 4 [Rattus norvegicus]
gi|149024115|gb|EDL80612.1| similar to Sfrs4 protein (predicted) [Rattus norvegicus]
Length = 488
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|355564745|gb|EHH21245.1| hypothetical protein EGK_04262, partial [Macaca mulatta]
Length = 159
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 83/129 (64%), Gaps = 10/129 (7%)
Query: 29 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 88
RDAEDAI GR+GY++ LRVE + R G + +RRSD+RVLV+
Sbjct: 1 RDAEDAIYGRNGYDYGQCWLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVS 54
Query: 89 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 147
GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+RKLD ++FR +
Sbjct: 55 GLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFRSH 111
Query: 148 AFSRSYVRV 156
SY+RV
Sbjct: 112 EGETSYIRV 120
>gi|348571040|ref|XP_003471304.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cavia
porcellus]
Length = 497
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|403281819|ref|XP_003932372.1| PREDICTED: serine/arginine-rich splicing factor 9 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 89/148 (60%), Gaps = 9/148 (6%)
Query: 29 RDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVT 88
+DAEDAI GR+GY++ RLRVE + R G + +RRSD+RVLV+
Sbjct: 15 QDAEDAIYGRNGYDYGQCRLRVEFPR------TYGGRGGWPRGGRNGPPTRRSDFRVLVS 68
Query: 89 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 148
GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+RKLD ++FR+
Sbjct: 69 GLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFRSH 125
Query: 149 FSRSYVRVREYDSRRSYSRSPSRSPYYS 176
S ++DS Y + + Y +
Sbjct: 126 EESSCCFGSQFDSSGDYPFGTTETRYQT 153
>gi|301788378|ref|XP_002929604.1| PREDICTED: hypothetical protein LOC100475275 [Ailuropoda
melanoleuca]
Length = 498
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|126328783|ref|XP_001365267.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Monodelphis
domestica]
Length = 491
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|395730870|ref|XP_003775801.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 4 [Pongo abelii]
Length = 492
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|281340422|gb|EFB16006.1| hypothetical protein PANDA_019831 [Ailuropoda melanoleuca]
Length = 488
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|156095500|ref|XP_001613785.1| splicing factor, arginine/serine-rich 1 [Plasmodium vivax Sal-1]
gi|148802659|gb|EDL44058.1| splicing factor, arginine/serine-rich 1, putative [Plasmodium
vivax]
Length = 314
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 93/160 (58%), Gaps = 11/160 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+ D+K +AF+EFED RDA DAI+ +DG +F G +LRVE+ R +
Sbjct: 31 YGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGCDFGGNKLRVEVPFNARDNG-- 88
Query: 63 MDRYSSYSSGGSRGV---SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
+YSS G G SRR Y V V+GLP S SWQDLKDH+R AG+ + VF++
Sbjct: 89 --KYSSRGGRGMMGRGMKSRRGRYVVEVSGLPLSGSWQDLKDHLREAGECGHADVFKN-- 144
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
G+ G V + +DM AI K + S FR + +S + +R+
Sbjct: 145 GL-GEVSFFHKEDMLEAIEKFNGSTFRSHEGEKSKITIRQ 183
>gi|47575808|ref|NP_001001248.1| arginine/serine-rich splicing factor 4 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|45872604|gb|AAH68213.1| splicing factor, arginine/serine-rich 6 [Xenopus (Silurana)
tropicalis]
Length = 568
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 89/149 (59%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
YG ++++DLK GY F+EFED RDA+DA+ +G + G R+ VE A G RR
Sbjct: 25 YGKLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARGPRRDRDG 79
Query: 62 ----SMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
S Y + SG + G R+++R++V L S SWQDLKD MR+AG+V ++ +
Sbjct: 80 YGYGSRSGYRNQRSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHK 139
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+R G++++ SY DMK A+ KLD +E
Sbjct: 140 ERAN-EGVIEFRSYSDMKRAMEKLDGTEI 167
>gi|403224084|dbj|BAM42214.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 259
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 82/145 (56%), Gaps = 14/145 (9%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I+ DLK +AF+EF D RDA DAIR +DG+ F G +LRVEL
Sbjct: 31 GRILYCDLKRSYTGSSFAFIEFSDSRDARDAIRDKDGFEFHGKKLRVELPF--------- 81
Query: 64 DRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R +SGGSR RR Y + VTGLP S SWQDLKDHMR AG + VFR G
Sbjct: 82 -RERDQASGGSRRHGPRRGKYVLEVTGLPPSGSWQDLKDHMRDAGHCGHADVFR---GGV 137
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRN 147
G + + S DM+YAI K D S F++
Sbjct: 138 GEISFFSRSDMEYAIEKYDGSTFKS 162
>gi|156084620|ref|XP_001609793.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797045|gb|EDO06225.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 239
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G ++ DLK +AFLE+ED RDA DAI+ RDG ++G RLRVE +
Sbjct: 31 FGKLISCDLKKNAGGSTFAFLEYEDARDAHDAIKDRDGSEYEGRRLRVETPFSAKDDGRP 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R + RR Y V V+GLP + SWQDLKDHMR AG+ + VFR G
Sbjct: 91 ARRRGPGA-------PRRGRYIVEVSGLPPTGSWQDLKDHMREAGECAHADVFR---GGV 140
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
G V + S DM+YAI K D S F+ + +S +RVRE
Sbjct: 141 GEVSFYSRSDMEYAIDKFDGSTFKSHEGEKSKIRVRE 177
>gi|389584162|dbj|GAB66895.1| splicing factor arginine/serine-rich 1 [Plasmodium cynomolgi strain
B]
Length = 316
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 93/160 (58%), Gaps = 11/160 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+ D+K +AF+EFED RDA DAI+ +DG +F G +LRVE+ R +
Sbjct: 31 YGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGCDFGGNKLRVEVPFNARDNG-- 88
Query: 63 MDRYSSYSSGGSRGV---SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
+Y+S G G SRR Y V V+GLP S SWQDLKDH+R AG+ + VF++
Sbjct: 89 --KYNSRGGRGMMGRGMKSRRGRYVVEVSGLPLSGSWQDLKDHLREAGECGHADVFKN-- 144
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
G+ G V + +DM AI K + S FR + +S + +RE
Sbjct: 145 GL-GEVSFFHKEDMLEAIEKFNGSTFRSHEGEKSKITIRE 183
>gi|410966619|ref|XP_003989828.1| PREDICTED: serine/arginine-rich splicing factor 4 [Felis catus]
Length = 499
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|155372181|ref|NP_001094701.1| serine/arginine-rich splicing factor 4 [Bos taurus]
gi|154425888|gb|AAI51319.1| SFRS4 protein [Bos taurus]
gi|296490028|tpg|DAA32141.1| TPA: splicing factor, arginine/serine-rich 4 [Bos taurus]
Length = 493
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|440907568|gb|ELR57702.1| Serine/arginine-rich splicing factor 4, partial [Bos grunniens
mutus]
Length = 488
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 19 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 73
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 74 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 133
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 134 KN-EGVIEFVSYSDMKRALEKLDGTEV 159
>gi|21361282|ref|NP_005617.2| serine/arginine-rich splicing factor 4 [Homo sapiens]
gi|20981726|sp|Q08170.2|SRSF4_HUMAN RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Pre-mRNA-splicing factor SRP75; AltName:
Full=SRP001LB; AltName: Full=Splicing factor,
arginine/serine-rich 4
gi|12803875|gb|AAH02781.1| Splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|30583669|gb|AAP36083.1| splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|60655747|gb|AAX32437.1| splicing factor arginine/serine-rich 4 [synthetic construct]
gi|123994341|gb|ABM84772.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
Length = 494
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|402853658|ref|XP_003891508.1| PREDICTED: serine/arginine-rich splicing factor 4 [Papio anubis]
Length = 494
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|395856813|ref|XP_003800813.1| PREDICTED: serine/arginine-rich splicing factor 4 [Otolemur
garnettii]
Length = 503
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|351695941|gb|EHA98859.1| Splicing factor, arginine/serine-rich 4 [Heterocephalus glaber]
Length = 489
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic
construct]
gi|60652653|gb|AAX29021.1| splicing factor arginine/serine-rich 4 [synthetic construct]
Length = 495
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|384939756|gb|AFI33483.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|332245240|ref|XP_003271770.1| PREDICTED: uncharacterized protein LOC100597914 isoform 1 [Nomascus
leucogenys]
Length = 494
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|386780975|ref|NP_001247807.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|355745074|gb|EHH49699.1| hypothetical protein EGM_00406 [Macaca fascicularis]
gi|380787433|gb|AFE65592.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|383408863|gb|AFH27645.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|119628064|gb|EAX07659.1| splicing factor, arginine/serine-rich 4, isoform CRA_c [Homo
sapiens]
Length = 464
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|70945413|ref|XP_742529.1| pre-mRNA splicing factor [Plasmodium chabaudi chabaudi]
gi|56521563|emb|CAH75989.1| pre-mRNA splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 373
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 96/176 (54%), Gaps = 13/176 (7%)
Query: 3 YGPIVDIDLKIP--PRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YG I ID+K+ YAF+ + D +DAE AI RDGY FDG RLRVE + +
Sbjct: 34 YGRIKYIDIKLTRGSSSTAYAFVHYYDIKDAEYAIERRDGYKFDGERLRVEFSG----EN 89
Query: 61 SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
S +Y G G R+++R++V+ LP + WQ LKD MR+ GDV ++ + +
Sbjct: 90 KSFGKYRRKEDG--IGPPLRTEHRIIVSNLPDNCKWQHLKDIMRQCGDVGYANIEHGK-- 145
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYS 176
GIV++ D M YAI K DR+EF+ + ++VR SY + RS YYS
Sbjct: 146 --GIVEFVDRDGMLYAIEKFDRAEFKVHDQVTNIKVRRDKRSLSYIK-KHRSDYYS 198
>gi|355557751|gb|EHH14531.1| hypothetical protein EGK_00474, partial [Macaca mulatta]
Length = 477
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 8 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 62
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 63 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 122
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 123 KN-EGVIEFVSYSDMKRALEKLDGTEV 148
>gi|119628063|gb|EAX07658.1| splicing factor, arginine/serine-rich 4, isoform CRA_b [Homo
sapiens]
gi|158256450|dbj|BAF84198.1| unnamed protein product [Homo sapiens]
Length = 494
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|114555162|ref|XP_001155042.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform 5 [Pan
troglodytes]
gi|397515847|ref|XP_003828154.1| PREDICTED: serine/arginine-rich splicing factor 4 [Pan paniscus]
gi|261858864|dbj|BAI45954.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
gi|410219650|gb|JAA07044.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253776|gb|JAA14855.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253778|gb|JAA14856.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410300938|gb|JAA29069.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410356834|gb|JAA44544.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
Length = 494
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|307438|gb|AAA36649.1| pre-mRNA splicing factor [Homo sapiens]
Length = 494
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|325302612|tpg|DAA34674.1| TPA_inf: alternative splicing factor SRp55/B52/SRp75 [Amblyomma
variegatum]
Length = 281
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 91/159 (57%), Gaps = 24/159 (15%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + DI LK G+ F+EFED+RDA+DAI+ +G G R+ VELAHG RR
Sbjct: 26 YGRVGDIHLK-----NGFGFVEFEDHRDADDAIKDLNGKELLGERVSVELAHGSRRGPGG 80
Query: 63 MDRYSSYSS-------GGSR---------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRA 106
R + S GG R G R++Y+++V L S SWQDLKD+MR+A
Sbjct: 81 --RIVAPGSRDWRSPPGGGRFNAPRESRFGPPVRTNYQLVVENLSSHVSWQDLKDYMRQA 138
Query: 107 GDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G+V F+ +R GIV++++Y DM+ A+ KLD ++
Sbjct: 139 GEVTFTDAHSNRPNQ-GIVEFSNYADMRNALNKLDNTDL 176
>gi|403293287|ref|XP_003937651.1| PREDICTED: serine/arginine-rich splicing factor 4 [Saimiri
boliviensis boliviensis]
Length = 500
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|147904116|ref|NP_001079647.1| serine/arginine-rich splicing factor 6 [Xenopus laevis]
gi|28436899|gb|AAH46668.1| MGC52985 protein [Xenopus laevis]
Length = 667
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 89/149 (59%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
YG +++IDLK GY F+EFED RDA+DA+ +G + G R+ +E A G RR
Sbjct: 25 YGKLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGKDLCGERVIIEHARGPRRDRDG 79
Query: 62 ----SMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
S Y + +G + G R+++R++V L S SWQDLKD MR+AG+V ++ +
Sbjct: 80 YGYGSRSGYRNQRTGRDKYGPPVRTEFRLVVENLSSRCSWQDLKDFMRQAGEVTYADAHK 139
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+R G++++ SY DMK A+ KLD +E
Sbjct: 140 ERAN-EGVIEFRSYSDMKRAVEKLDGTEI 167
>gi|296207272|ref|XP_002750572.1| PREDICTED: serine/arginine-rich splicing factor 4 [Callithrix
jacchus]
Length = 500
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|431891168|gb|ELK02045.1| Splicing factor, arginine/serine-rich 4 [Pteropus alecto]
Length = 500
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|95007448|emb|CAJ20669.1| splicing factor, putative [Toxoplasma gondii RH]
Length = 216
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 89/157 (56%), Gaps = 16/157 (10%)
Query: 8 DIDLKIPPRPPG------YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL-AHGGRRHS 60
DID+K R G YAF+EFE R AEDA+ R GY + G LRVE A RR
Sbjct: 59 DIDIK---RARGGMSDSCYAFVEFETIRAAEDAVACRHGYLYRGRSLRVEFTAQPARRLG 115
Query: 61 SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
S+ + GG+ G RR+ +R LV+ LP WQ LKDHMRRAG V F++V
Sbjct: 116 SNPN---FIPMGGASGPPRRTGFRALVSFLPPGCRWQHLKDHMRRAGPVGFAEVLSHG-- 170
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 157
G+V++ +D+KYA+R LD+SE R S ++VR
Sbjct: 171 -RGVVEFEHAEDLKYAVRSLDKSEMRVEGRGSVIKVR 206
>gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 382
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|346468507|gb|AEO34098.1| hypothetical protein [Amblyomma maculatum]
Length = 280
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 89/160 (55%), Gaps = 28/160 (17%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + DI LK G+ F+EFED+RDA+DAI+ +G G R+ VELAHG RR
Sbjct: 26 YGRVGDIHLK-----NGFGFVEFEDHRDADDAIKDLNGKELLGERVSVELAHGSRRGPG- 79
Query: 63 MDRYSSYSSGGSR-----------------GVSRRSDYRVLVTGLPSSASWQDLKDHMRR 105
+ GSR G R++Y+++V L S SWQDLKD+MR+
Sbjct: 80 ----GRIVAPGSRDWRSPPGRFNAPRESRFGPPVRTNYQLIVENLSSHVSWQDLKDYMRQ 135
Query: 106 AGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
AG+V F+ +R GIV++++Y DM+ A+ KLD ++
Sbjct: 136 AGEVTFTDAHSNRPNQ-GIVEFSNYADMRNALNKLDNTDL 174
>gi|116175257|ref|NP_001070684.1| serine/arginine-rich splicing factor 4 [Sus scrofa]
gi|115371753|gb|ABI96201.1| SFRS4 [Sus scrofa]
Length = 491
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|84996527|ref|XP_952985.1| splicing factor [Theileria annulata strain Ankara]
gi|65303981|emb|CAI76360.1| splicing factor, putative [Theileria annulata]
Length = 269
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 83/145 (57%), Gaps = 10/145 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I+ DLK +AF+EF D RDA DAIR +DGY F G +LRVEL R+
Sbjct: 30 FGRIIYCDLKKSYSGSPFAFIEFSDSRDARDAIRDKDGYEFHGKKLRVELPF---RYRDE 86
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R SS G +RR Y + VTGLP + SWQDLKDHMR AG+ + VFR G
Sbjct: 87 PRRPSSRRY----GTTRRGKYVLEVTGLPPTGSWQDLKDHMRDAGECGHADVFR---GGV 139
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRN 147
G + + S DM YAI + D S FR+
Sbjct: 140 GEITFFSRSDMDYAIERFDGSTFRS 164
>gi|320038617|gb|EFW20552.1| pre-RNA splicing factor Srp2 [Coccidioides posadasii str. Silveira]
gi|392870837|gb|EJB12074.1| pre-RNA splicing factor Srp2 [Coccidioides immitis RS]
Length = 302
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 107/220 (48%), Gaps = 37/220 (16%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I DI L G+ F+E+ED DA D + G +F G RL V+ A G R +
Sbjct: 33 GKITDIKLMS-----GFGFIEYEDALDARDVVPAYHGTDFKGSRLTVQFARGPRHKET-- 85
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+S S + RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ RD G
Sbjct: 86 --FSGPSDRSNAPRPRRTPYRMQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEGR- 141
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G V++ + D+K AI KLD EF+ + ++ D R P R PY
Sbjct: 142 GFVEFETGADLKTAIEKLDGREFKGSRVTCTQDIQAPDDR------PVRDPY-------- 187
Query: 183 PYYSRSRSPSRSWSYSPRS-------RSYSPRGKYSRRSP 215
RSRSP R Y P R YSPRG Y RSP
Sbjct: 188 ----RSRSPVRRGGYPPMDDYDRRPPRGYSPRGHYRERSP 223
>gi|344287504|ref|XP_003415493.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Loxodonta
africana]
Length = 500
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFLSYSDMKRALEKLDGTEV 165
>gi|428162693|gb|EKX31812.1| hypothetical protein GUITHDRAFT_82780, partial [Guillardia theta
CCMP2712]
Length = 208
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 27/147 (18%)
Query: 12 KIPPRPPGYAFLEFEDYRDAEDAIRGR-DGYNFDGYRLRVELAHGGRRHSSSMDRYSSY- 69
++P PP +AF+ FE DAEDA+RGR DG F+G RLRVE++ SS D Y +
Sbjct: 26 RLPTIPPAFAFVSFEYPEDAEDAVRGRADGVMFEGQRLRVEMSR------SSQDGYVEWG 79
Query: 70 -------------SSGGSRGV---SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 113
S G+R RRSD+R++++GLP SASWQDLKD R AG+V FS
Sbjct: 80 GSWVGKEEDGGRASQAGNRAPPRDLRRSDHRIIISGLPPSASWQDLKDFFRSAGEVIFSD 139
Query: 114 VFRDRGGMTGIVDYTSYDDMKYAIRKL 140
V R G GIV++ + D +YAI K+
Sbjct: 140 VDRQGG---GIVEFANKSDQEYAISKV 163
>gi|47212671|emb|CAF94152.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1550
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 91/167 (54%), Gaps = 7/167 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G G R+ VE G RR
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTKGPRRDGGY 79
Query: 63 MDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
R G R G R+DYR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 SGRSGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKN- 138
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRS 168
G++++ Y DMK A+ KLD +E R RRSYSRS
Sbjct: 139 EGVIEFRQYSDMKRALEKLDGTEVNGRKIRLIEDRPGAKRRRSYSRS 185
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 73/127 (57%), Gaps = 2/127 (1%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVS 78
Y F+EF+D RDA+DA+ +G G R+ VE G RR R G R G
Sbjct: 1209 YGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTKGPRRDGGYSGRSGYGRWGRDRYGPP 1268
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 138
R+DYR++V L S SWQDLKD+MR+AG+V ++ + R G++++ Y DMK A+
Sbjct: 1269 IRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKN-EGVIEFRQYSDMKRALE 1327
Query: 139 KLDRSEF 145
KLD +E
Sbjct: 1328 KLDGTEV 1334
>gi|384494440|gb|EIE84931.1| hypothetical protein RO3G_09641 [Rhizopus delemar RA 99-880]
Length = 252
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 83/143 (58%), Gaps = 15/143 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK G+ F+EF D RDA+D + G +F G RL VE+A G RRH
Sbjct: 26 YGDIREINLKT-----GFGFVEFADERDAKDVVYDFHGKSFLGERLIVEIAKGTRRHDER 80
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R + S RS YR++V + +WQDLKD MR+AG+V F+ + RDR
Sbjct: 81 RPRGNDRS---------RSHYRLIVENIAPGTNWQDLKDMMRKAGEVTFADISRDRPS-E 130
Query: 123 GIVDYTSYDDMKYAIRKLDRSEF 145
GIV++ DDM+YA++KL+ E
Sbjct: 131 GIVEFHVRDDMEYALKKLNDREL 153
>gi|425767261|gb|EKV05835.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum
PHI26]
gi|425780059|gb|EKV18081.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum Pd1]
Length = 303
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 110/216 (50%), Gaps = 28/216 (12%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G +F G RL V+ A G RR +
Sbjct: 33 GKITEIKLMN-----GFGFIEYDDQLDARDIVPAFHGSDFKGERLTVQFARGPRRKEA-- 85
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ + RR+ +R+ ++GLP + SWQDLKD R++G DV +S+ R++G
Sbjct: 86 --FQGPPDRNALPRPRRTMFRMQISGLPET-SWQDLKDFARQSGLDVVYSETGREQG--R 140
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G V++ + D+K A+ KLD+ EF+ + ++ ++ R P R PY SRS R
Sbjct: 141 GFVEFETASDLKTAVEKLDQREFKGSVVSCVADIQNFEER------PVRDPYRSRSPPRR 194
Query: 183 PYYSRSRSPSRSWSYS---PRSRSYSPRGKYSRRSP 215
PY P+ Y P R YSPR Y RSP
Sbjct: 195 PY------PATMEEYDRRIPPPRGYSPRDHYRERSP 224
>gi|68066368|ref|XP_675167.1| pre-mRNA splicing factor [Plasmodium berghei strain ANKA]
gi|56494193|emb|CAH97347.1| pre-mRNA splicing factor, putative [Plasmodium berghei]
Length = 457
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 13/176 (7%)
Query: 3 YGPIVDIDLKIP--PRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
+G I ID+K+ YAF+ + D +DAE AI RDGY FDG RLRVE + +
Sbjct: 1 FGRIKYIDIKLTRGSTSTAYAFVHYYDIKDAEYAIERRDGYKFDGERLRVEFSGENK--- 57
Query: 61 SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
S +Y G G R+++R++V+ LP + WQ LKD MR+ GDV ++ + +
Sbjct: 58 -SFGKYRRKEDGI--GPPLRTEHRIIVSNLPDNCKWQHLKDIMRQCGDVGYANIEHGK-- 112
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYS 176
GIV++ D M YAI K DR+EF+ + ++VR SY + RS YYS
Sbjct: 113 --GIVEFVDRDGMLYAIEKFDRAEFKVHDQVTNIKVRRDKRSLSYIK-KHRSDYYS 165
>gi|392870838|gb|EJB12075.1| pre-RNA splicing factor Srp2, variant [Coccidioides immitis RS]
Length = 399
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 107/220 (48%), Gaps = 37/220 (16%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I DI L G+ F+E+ED DA D + G +F G RL V+ A G R +
Sbjct: 130 GKITDIKLMS-----GFGFIEYEDALDARDVVPAYHGTDFKGSRLTVQFARGPRHKET-- 182
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+S S + RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ RD G
Sbjct: 183 --FSGPSDRSNAPRPRRTPYRMQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEG-R 238
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G V++ + D+K AI KLD EF+ + ++ D R P R PY
Sbjct: 239 GFVEFETGADLKTAIEKLDGREFKGSRVTCTQDIQAPDDR------PVRDPY-------- 284
Query: 183 PYYSRSRSPSRSWSYSPRS-------RSYSPRGKYSRRSP 215
RSRSP R Y P R YSPRG Y RSP
Sbjct: 285 ----RSRSPVRRGGYPPMDDYDRRPPRGYSPRGHYRERSP 320
>gi|83273559|ref|XP_729451.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23487306|gb|EAA21016.1| splicing factor, arginine/serine-rich 4 [Plasmodium yoelii yoelii]
Length = 516
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 13/176 (7%)
Query: 3 YGPIVDIDLKIP--PRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
+G I ID+K+ YAF+ + D +DAE AI RDGY FDG RLRVE + +
Sbjct: 35 FGRIKYIDIKLTRGSSSTAYAFVHYYDIKDAEYAIERRDGYKFDGERLRVEFSG----EN 90
Query: 61 SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
S +Y G G R+++R++V+ LP + WQ LKD MR+ GDV ++ + +
Sbjct: 91 KSFGKYRRKEDG--IGPPLRTEHRIIVSNLPDNCKWQHLKDIMRQCGDVGYANIEHGK-- 146
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYS 176
GIV++ D M YAI K DR+EF+ + ++VR SY + RS YYS
Sbjct: 147 --GIVEFVDRDGMLYAIEKFDRAEFKVHDQVTNIKVRRDKRSLSYIK-KHRSDYYS 199
>gi|325182716|emb|CCA17171.1| splicing factor putative [Albugo laibachii Nc14]
Length = 224
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 84/146 (57%), Gaps = 19/146 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGG---RRH 59
+G I I LK+P RPP +AF+E+E+ A++A+R +G G ++RVE++ G R
Sbjct: 25 HGQIACIRLKVPSRPPAFAFIEYEESSGADNAVRESNGIELLGSKIRVEISRSGPNQTRD 84
Query: 60 SSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
+SS R+ + YRV V+ L S SWQDLKD RR GDV + V D
Sbjct: 85 TSSNKRFG-------------TQYRVTVSNLSSKISWQDLKDFFRRGGDVVHTNV--DHS 129
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEF 145
G +G+ + +YD+M+ AIRKLDR +
Sbjct: 130 G-SGVGSFATYDEMERAIRKLDRVKL 154
>gi|401397011|ref|XP_003879960.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
gi|325114368|emb|CBZ49925.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
Length = 378
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 89/152 (58%), Gaps = 7/152 (4%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL-AHGGRRHSSSMDRYSSYSS---GGSR 75
YAF+EFE R AEDA+ R GY + G LRVE A RR S ++ + + GGS
Sbjct: 6 YAFVEFETIRAAEDAVACRHGYLYRGRSLRVEFTAQPSRRAGSGVNPNTIPTGSFGGGSA 65
Query: 76 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 135
G RR+ +RVLV+ LP WQ LKDHMR+AG V F++V G+V+Y +D++Y
Sbjct: 66 GPPRRTGHRVLVSFLPPGCRWQHLKDHMRKAGPVGFAEVLSQ---GRGVVEYEHPEDLQY 122
Query: 136 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSR 167
A+R LD++E R S ++V + S R Y R
Sbjct: 123 AVRSLDKTELRVDGRGSIIKVEKDYSARDYDR 154
>gi|148224986|ref|NP_001080148.1| splicing factor, arginine/serine-rich 6 [Xenopus laevis]
gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis]
Length = 660
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 91/160 (56%), Gaps = 28/160 (17%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG ++++DLK GY F+EFED RDA+DA+ +G + G R+ VE A G RR
Sbjct: 25 YGKLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARGPRR---- 75
Query: 63 MDR----YSSYSSGGSRGVSR-------------RSDYRVLVTGLPSSASWQDLKDHMRR 105
DR Y S S GS G R R+++R++V L S SWQDLKD MR+
Sbjct: 76 -DRDGYGYGSRSKHGSPGGYRNQRSGRDKYGPPVRTEFRLVVENLSSRCSWQDLKDFMRQ 134
Query: 106 AGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
AG+V ++ ++R G++++ SY D+K A+ KLD +E
Sbjct: 135 AGEVTYADAHKERPN-EGVIEFRSYSDLKRAVEKLDGTEI 173
>gi|303317336|ref|XP_003068670.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108351|gb|EER26525.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 300
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 108/220 (49%), Gaps = 39/220 (17%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I DI L G+ F+E+ED DA D + DG +F G RL V+ A G R +
Sbjct: 33 GKITDIKLMS-----GFGFIEYEDALDARDVVP--DGTDFKGSRLTVQFARGPRHKET-- 83
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+S S + RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ RD G
Sbjct: 84 --FSGPSDRSNAPRPRRTPYRMQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEGR- 139
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G V++ + D+K AI KLD EF+ + ++ D R P R PY
Sbjct: 140 GFVEFETGADLKTAIEKLDGREFKGSRVTCTQDIQAPDDR------PVRDPY-------- 185
Query: 183 PYYSRSRSPSRSWSYSPRS-------RSYSPRGKYSRRSP 215
RSRSP R Y P R YSPRG Y RSP
Sbjct: 186 ----RSRSPVRRGGYPPMDDYDRRPPRGYSPRGHYRERSP 221
>gi|241159531|ref|XP_002408582.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215494365|gb|EEC04006.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 339
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 85/143 (59%), Gaps = 8/143 (5%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ++ LK GY F+EF+DYRDAEDA+ +G G R+ VELA G RR +
Sbjct: 26 YGRIGEVLLK-----NGYGFVEFDDYRDAEDAVHDLNGKKLMGERISVELARGIRRGPGT 80
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
Y SS G R++Y++LV L SS SWQDLKD MR+AG+V ++ + R
Sbjct: 81 G--YGGASSSRRYGPPSRTEYQLLVENLSSSVSWQDLKDFMRQAGEVTYTDAHKLRRN-E 137
Query: 123 GIVDYTSYDDMKYAIRKLDRSEF 145
G+V++ +Y DMK A+ KL+ +
Sbjct: 138 GVVEFATYSDMKNALIKLNHMDL 160
>gi|449522400|ref|XP_004168214.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 106
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+DI+LKIPPRPP Y F+EFE RDAEDAIR RDGYNFDG RLRVELAHGGR SSS
Sbjct: 30 YGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSS 89
Query: 63 MDRYSSY 69
DR SSY
Sbjct: 90 -DRRSSY 95
>gi|399219025|emb|CCF75912.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 84/157 (53%), Gaps = 16/157 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I D+K +AF+EFED RDA+DAI+ +DGY F G RLRVE+ R +S
Sbjct: 31 FGKIKRCDVKRGANGSSFAFVEFEDPRDAKDAIKEKDGYEFKGSRLRVEVPFSDRGYSR- 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R RR Y V V GLP S SWQDLKDHMR AG+ + VFR G
Sbjct: 90 -----------RRPTPRRGHYTVEVLGLPPSGSWQDLKDHMRDAGECGHADVFR---GGV 135
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
G V + S DM AI D S FR + ++ + VRE
Sbjct: 136 GEVSFFSRRDMDAAIEMFDGSTFRSHEGEKAKITVRE 172
>gi|119187025|ref|XP_001244119.1| hypothetical protein CIMG_03560 [Coccidioides immitis RS]
Length = 398
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 108/220 (49%), Gaps = 39/220 (17%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I DI L G+ F+E+ED DA D + DG +F G RL V+ A G R +
Sbjct: 131 GKITDIKLMS-----GFGFIEYEDALDARDVVP--DGTDFKGSRLTVQFARGPRHKET-- 181
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+S S + RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ RD G
Sbjct: 182 --FSGPSDRSNAPRPRRTPYRMQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEGR- 237
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G V++ + D+K AI KLD EF+ + ++ D R P R PY
Sbjct: 238 GFVEFETGADLKTAIEKLDGREFKGSRVTCTQDIQAPDDR------PVRDPY-------- 283
Query: 183 PYYSRSRSPSRSWSYSPRS-------RSYSPRGKYSRRSP 215
RSRSP R Y P R YSPRG Y RSP
Sbjct: 284 ----RSRSPVRRGGYPPMDDYDRRPPRGYSPRGHYRERSP 319
>gi|427777529|gb|JAA54216.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 308
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 83/141 (58%), Gaps = 15/141 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DI LK G+ F++ DYRDAEDA+R +G G R+ VELA G RR
Sbjct: 26 YGRIEDIVLK-----NGFGFVDISDYRDAEDAVRDLNGKRLMGERVTVELARGMRRGPPD 80
Query: 63 MDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
DR G R G R++Y++LV L +S SWQDLKD MR+AGDV ++ + R
Sbjct: 81 YDR-------GPRRFGPPTRTNYQLLVENLSTSVSWQDLKDFMRQAGDVTYTDAHKLR-R 132
Query: 121 MTGIVDYTSYDDMKYAIRKLD 141
G+V++ SY DMK A+R LD
Sbjct: 133 HQGVVEFASYSDMKNALRSLD 153
>gi|255936927|ref|XP_002559490.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584110|emb|CAP92139.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 301
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 111/216 (51%), Gaps = 30/216 (13%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + DG F G RL V+ A G RR +
Sbjct: 33 GKITEIKLMN-----GFGFIEYDDQLDARDIVP--DGSEFKGERLTVQFARGPRRKEA-- 83
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ S + RR+ +R+ ++GLP + SWQDLKD R++G DV +S+ R++G
Sbjct: 84 --FPGPSERNALPRPRRTIFRMQISGLPET-SWQDLKDFARQSGLDVVYSETGREQG--R 138
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G V++ + +D+K A+ KLD+ EF+ + ++ ++ R P R PY SRS R
Sbjct: 139 GFVEFETANDLKTAVEKLDQREFKGSVVSCVADIQSFEER------PMRDPYRSRSPPRR 192
Query: 183 PYYSRSRSPSRSWSYS---PRSRSYSPRGKYSRRSP 215
PY P Y P R YSPR Y RSP
Sbjct: 193 PY------PVTMDEYDRRIPPPRGYSPREHYRERSP 222
>gi|242782227|ref|XP_002479958.1| electron transfer flavoprotein-ubiquinone oxidoreductase [Talaromyces
stipitatus ATCC 10500]
gi|218720105|gb|EED19524.1| electron transfer flavoprotein-ubiquinone oxidoreductase [Talaromyces
stipitatus ATCC 10500]
Length = 1100
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 107/214 (50%), Gaps = 21/214 (9%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E+ED DA D + G +F G RL V+ A G R +
Sbjct: 828 GKITEIKLMN-----GFGFIEYEDAMDARDVVPAFHGSDFKGERLTVQFARGPRHKET-- 880
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
++ S + RR+ +R+ V+GLP+ SWQDLKD R++G DV +S+ R+R G
Sbjct: 881 --FNGPSDRPAAPRPRRTVFRMQVSGLPTETSWQDLKDFARQSGLDVVYSETTRERDG-R 937
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G V++ S+ D+K A+ KLD E + + D + + R+P R PY SRS R
Sbjct: 938 GFVEFESHADLKTAVEKLDGRELKGSQVTCVA-----DVQPAEERAPYRDPYRSRSPPR- 991
Query: 183 PYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPS 216
R P + R YSPR Y RSP
Sbjct: 992 ----RGYPPMDDYDRRGPPRGYSPRQHYRERSPQ 1021
>gi|328770953|gb|EGF80994.1| hypothetical protein BATDEDRAFT_36927 [Batrachochytrium
dendrobatidis JAM81]
Length = 246
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 114/215 (53%), Gaps = 21/215 (9%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 78
G+AF+E+ D RDA D +R DG +D RL V+ A G S DR +S S
Sbjct: 40 GFAFVEYSDSRDARDCVRELDGSRYDRERLSVQPAKSG---SDRRDRPASSSL------- 89
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 138
RR DY ++V GLP+ SWQDLKD R+ GDV F+ + D G GIV++TS D AI
Sbjct: 90 RRGDYGIVVQGLPARTSWQDLKDLFRKVGDVIFTNI--DNSG-DGIVEFTSETDKNSAIE 146
Query: 139 KLDRSEFRNAF----SRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRS 194
+ D++EF+ A R ++ D+RRS R S S R SP RS SP R
Sbjct: 147 QFDKTEFQGAVISVKDRDAANGKDSDARRSPDRRGSPGRRSSPGRRSSPRRDRSVSPRRD 206
Query: 195 WSYSP-RSRSYSPRGKYS---RRSPSLSPARSASQ 225
S SP R RS SPR S RR S++P R S+
Sbjct: 207 RSVSPRRDRSVSPRRDRSVSPRRDRSITPPRHHSE 241
>gi|395505266|ref|XP_003756964.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Sarcophilus harrisii]
Length = 321
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 91/149 (61%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR---- 58
YG ++++DLK GY F+EFED RDA+DA+ +G + G R+ VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARGPRRDRDG 79
Query: 59 HSSSMDRYSSYSSGG--SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
+S RYSS + G G R++YR++V L S SWQDLKD MR+AG+V ++ +
Sbjct: 80 YSYGSRRYSSRRATGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHK 139
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+R G++++ SY DMK A+ KLD +E
Sbjct: 140 ERTN-EGVIEFRSYSDMKRALDKLDGTEI 167
>gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens]
Length = 192
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 140 KN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|212526968|ref|XP_002143641.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
gi|210073039|gb|EEA27126.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
Length = 261
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 78
G+ F+E+ED DA D + DG +F G RL V+ A G R + ++ S S
Sbjct: 3 GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFARGPRHKET----FNGPSDRPSAPRP 56
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 137
RR+ +R+ V+GLP+ SWQDLKD R++G DV +S+ R+R G G V++ S+ D+K A+
Sbjct: 57 RRTVFRMQVSGLPTETSWQDLKDFARQSGLDVVYSETTRERDGR-GFVEFESHADLKTAV 115
Query: 138 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 197
KLD E + + D + + R P R PY SRS R R P+ +
Sbjct: 116 EKLDGRELKGSQVTCVA-----DVQPAEERPPYRDPYRSRSPPR-----RGYPPTDEYDR 165
Query: 198 SPRSRSYSPRGKYSRRSPS 216
R YSPR Y RSP
Sbjct: 166 RGPPRGYSPRPHYRERSPQ 184
>gi|410911522|ref|XP_003969239.1| PREDICTED: uncharacterized protein LOC101080136 isoform 1 [Takifugu
rubripes]
Length = 374
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 83/144 (57%), Gaps = 7/144 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G G R+ VE G RR
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTKGPRRDGGY 79
Query: 63 MDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
R G R G R+DYR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 SGRSGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKN- 138
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ Y DMK A+ KLD +E
Sbjct: 139 EGVIEFRQYSDMKRALEKLDGTEV 162
>gi|325186279|emb|CCA20785.1| splicing factor putative [Albugo laibachii Nc14]
Length = 275
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 12/138 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G IV++ LK P RPP +AF+E+ED RDAEDA++ G G +RVE++ G + +S
Sbjct: 48 FGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHGKELHGAEIRVEISRNGPK-ASR 106
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+++ G + +RV ++ +P S SWQDLKD +R G V + V DR G
Sbjct: 107 DEKFGGRHHG--------TQFRVELSNIPRSVSWQDLKDFLRIGGVVVHADV--DRRG-N 155
Query: 123 GIVDYTSYDDMKYAIRKL 140
G+ +T+ +M+ AIRKL
Sbjct: 156 GVASFTNQQEMERAIRKL 173
>gi|348514746|ref|XP_003444901.1| PREDICTED: hypothetical protein LOC100690823 [Oreochromis
niloticus]
Length = 396
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 86/151 (56%), Gaps = 18/151 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR---- 58
YG +++IDLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGKLMEIDLK-----NGYGFVEFEDNRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 59 ---HSSSMDRYSSYSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
R + YSS G + R++YR++V L S SWQDLKD MR+AG+V
Sbjct: 80 YGGGYWGGGRSNGYSSRSRSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVT 139
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 141
++ ++R G++++ +Y DMK A+ KLD
Sbjct: 140 YADAHKERTN-EGVIEFRTYSDMKRALDKLD 169
>gi|317143798|ref|XP_003189536.1| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
Length = 299
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 110/217 (50%), Gaps = 32/217 (14%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS-- 61
G I +I L G+ F+E+ED DA D + G +F G RL V+ A G RR +
Sbjct: 33 GKITEIKLMN-----GFGFIEYEDAMDARDVVPAFHGSDFKGERLTVQFARGPRRKENFP 87
Query: 62 -SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRG 119
MDR + RR+ YR++V+GLP + SWQDLKD R AG DV +S+ R+ G
Sbjct: 88 GPMDRPNMPR-------PRRTVYRMMVSGLPET-SWQDLKDFARGAGLDVVYSETGREPG 139
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
G V++ + +D+K AI KLD +F+ + ++ D R P R PY R
Sbjct: 140 --RGFVEFETANDLKTAIEKLDGRDFKGSRVSCVADIQPVDER------PFRDPY----R 187
Query: 180 SRSPYYSRSRSPSRSWSYS-PRSRSYSPRGKYSRRSP 215
SRSP RS P + P R YSPR Y RSP
Sbjct: 188 SRSP--RRSYPPVDEYDRRFPPPRGYSPRAHYRERSP 222
>gi|238487096|ref|XP_002374786.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
gi|317143800|ref|XP_001819713.2| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
gi|220699665|gb|EED56004.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
Length = 300
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 110/217 (50%), Gaps = 32/217 (14%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS-- 61
G I +I L G+ F+E+ED DA D + G +F G RL V+ A G RR +
Sbjct: 33 GKITEIKLMN-----GFGFIEYEDAMDARDVVPAFHGSDFKGERLTVQFARGPRRKENFP 87
Query: 62 -SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRG 119
MDR + RR+ YR++V+GLP + SWQDLKD R AG DV +S+ R+ G
Sbjct: 88 GPMDRPNMPR-------PRRTVYRMMVSGLPET-SWQDLKDFARGAGLDVVYSETGREPG 139
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
G V++ + +D+K AI KLD +F+ + ++ D R P R PY R
Sbjct: 140 --RGFVEFETANDLKTAIEKLDGRDFKGSRVSCVADIQPVDER------PFRDPY----R 187
Query: 180 SRSPYYSRSRSPSRSWSYS-PRSRSYSPRGKYSRRSP 215
SRSP RS P + P R YSPR Y RSP
Sbjct: 188 SRSP--RRSYPPVDEYDRRFPPPRGYSPRAHYRERSP 222
>gi|327283237|ref|XP_003226348.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Anolis
carolinensis]
Length = 343
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 90/151 (59%), Gaps = 14/151 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDAEDA+ +G + G R+ VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDAEDAVYELNGKDLCGERVIVEHARGPRRDRDG 79
Query: 60 ----SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
S S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYSSRSGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADA 139
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 HKERTN-EGVIEFRSYSDMKRALDKLDGTEI 169
>gi|317036141|ref|XP_001397700.2| pre-RNA splicing factor Srp2 [Aspergillus niger CBS 513.88]
gi|358368362|dbj|GAA84979.1| pre-RNA splicing factor Srp2 [Aspergillus kawachii IFO 4308]
Length = 301
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 111/217 (51%), Gaps = 31/217 (14%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS-- 61
G I +I L G+ F+E+ED DA D + G +F G RL V+ A G RR +
Sbjct: 33 GKITEIKLMN-----GFGFIEYEDAMDARDVVPAFHGSDFKGERLTVQFARGPRRKENFP 87
Query: 62 -SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRG 119
MDR + RR+ +R++V+GLP + SWQDLKD R++G DV +S+ R+ G
Sbjct: 88 GPMDRPNMPR-------PRRTIFRMMVSGLPET-SWQDLKDFARQSGLDVVYSETGRELG 139
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
G V++ + +D+K AI KLD EF+ + ++ Y R+ R PY R
Sbjct: 140 --RGFVEFETANDLKTAIEKLDGREFKGSRVTCIADIQTYPDERAI-----RDPY----R 188
Query: 180 SRSPYYSRSRSPSRSWSYS-PRSRSYSPRGKYSRRSP 215
SRSP RS P + P R YSPR Y RSP
Sbjct: 189 SRSP--RRSYPPMDEYDRRFPAPRGYSPRAHYRERSP 223
>gi|67537616|ref|XP_662582.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|40741866|gb|EAA61056.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|259482149|tpe|CBF76354.1| TPA: pre-RNA splicing factor Srp2, putative (AFU_orthologue;
AFUA_3G10100) [Aspergillus nidulans FGSC A4]
Length = 296
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 24/213 (11%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E+ED DA D + G +F G RL V+ A G RR +
Sbjct: 33 GKITEIKLMN-----GFGFIEYEDAMDARDIVPAFHGSDFKGERLTVQFARGPRRKEN-- 85
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ + + RR+ +R++++GLP + SWQDLKD R++G DV +S+ R+ G
Sbjct: 86 --FPVPTDRPNLPRPRRTIFRMIISGLPET-SWQDLKDFARQSGLDVVYSETGREPG--R 140
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
GIV++ + +D+K A+ KLD EF+ ++ YD R P R PY SRS R
Sbjct: 141 GIVEFETANDLKTAVEKLDGREFKGTRVTCVPDIQPYDDR------PYRDPYRSRSPRRG 194
Query: 183 PYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSP 215
Y R +S R YSPR Y RSP
Sbjct: 195 --YPPMDEYDRRYSV---PRGYSPRSHYRERSP 222
>gi|325189186|emb|CCA23709.1| splicing factor putative [Albugo laibachii Nc14]
Length = 233
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 12/138 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G IV++ LK P RPP +AF+E+ED RDAEDA++ G G +RVE++ G + +S
Sbjct: 48 FGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHGKELHGAEIRVEISRNGPK-ASR 106
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+++ G + +RV ++ +P S SWQDLKD +R G V + V DR G
Sbjct: 107 DEKFGGRHHG--------TQFRVELSNIPRSVSWQDLKDFLRIGGVVVHADV--DRRG-N 155
Query: 123 GIVDYTSYDDMKYAIRKL 140
G+ +T+ +M+ AIRKL
Sbjct: 156 GVASFTNQQEMERAIRKL 173
>gi|354472339|ref|XP_003498397.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cricetulus
griseus]
Length = 476
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 87/149 (58%), Gaps = 7/149 (4%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
++ G D+K P GY F+EF+D RDA+DA+ +G + G R+ VE A G RR
Sbjct: 5 LVCGNCQFADVKEPQ--AGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDG 62
Query: 61 SSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
S S Y SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ +
Sbjct: 63 SYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK 122
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R G++++ SY DMK A+ KLD +E
Sbjct: 123 GRKN-EGVIEFVSYSDMKRALEKLDGTEV 150
>gi|440893251|gb|ELR46093.1| Serine/arginine-rich splicing factor 6 [Bos grunniens mutus]
Length = 348
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 91/156 (58%), Gaps = 19/156 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG +++IDLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRGD 79
Query: 60 ---SSSMDR-----YSSYSSGG--SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
SS D+ YSS + G G R+++R++V L S SWQDLKD MR+AG+V
Sbjct: 80 WVVVSSHDKGGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEV 139
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 140 TYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 174
>gi|300121283|emb|CBK21663.2| unnamed protein product [Blastocystis hominis]
Length = 381
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 90/154 (58%), Gaps = 14/154 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG ++D+ LK+ P Y F+EFE+ AE+A++G++G G LRVE+A+G
Sbjct: 26 YGTVIDVTLKLTGHTP-YGFVEFEEESAAEEAVKGKNGSVLGGLSLRVEVANG---RGPK 81
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR S Y G ++YRV VT LP SWQDLKDHMR+ GDV + V G
Sbjct: 82 GDRGSKY------GPPVHTNYRVEVTHLPYHCSWQDLKDHMRKEGDVGYCSV----DGGV 131
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 156
GIV+YT+YDDM AI+ LD S+ + SY+ V
Sbjct: 132 GIVEYTNYDDMMRAIKYLDDSKCLSRGESSYIHV 165
>gi|307192389|gb|EFN75624.1| Serine-arginine protein 55 [Harpegnathos saltator]
Length = 313
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 64/292 (21%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG------- 55
YG I ++ +K G+AF+EF+DYRDA+DA+ +G G R+ VE A G
Sbjct: 26 YGRIKEVAMK-----NGFAFVEFDDYRDADDAVYELNGKELLGERITVERARGTPRGSDQ 80
Query: 56 ------------GRRHSSSMDRYSSYSSGGSRGVSR-----RSDYRVLVTGLPSSASWQD 98
RR + S++R + +S + + R R++YR+ V L S SWQD
Sbjct: 81 WRYGDSRGGYGDSRRSADSVNRNTRTASSYKQSLPRYGPPTRTEYRLTVENLSSRVSWQD 140
Query: 99 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 158
LKD+MR+AG+V ++ + R G+V++ +Y D+K AI KLD +E R+R
Sbjct: 141 LKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDKLDDTELNGR------RIRL 193
Query: 159 YDSRRSY--------------------SRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS 198
+ +R S +PS +P + + P ++ + SR+ S S
Sbjct: 194 IEDKRQVAVVPVAAAVAVAVPNQEHIRSPNPSLNPNLRNAAAHVPNPNQETAQSRNLSQS 253
Query: 199 PRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSPPRSFSRSGSFARTWGVGY 250
P +P R SP RS +P S P+ R+ S +G+
Sbjct: 254 P-----NPDLVLGPRLRGQSPGRSP---NPKPSLPQRIDRAASAHEVTDLGH 297
>gi|444720822|gb|ELW61591.1| Vascular endothelial zinc finger 1 [Tupaia chinensis]
Length = 399
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 83/146 (56%), Gaps = 23/146 (15%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGAGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ R SRRS+ RV+V+ GDVC++ V+RD
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVS------------------GDVCYADVYRDG-- 138
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
TG+V++ +DM YA+RKLD ++FR
Sbjct: 139 -TGVVEFVRKEDMTYAVRKLDNTKFR 163
>gi|410930984|ref|XP_003978877.1| PREDICTED: uncharacterized protein LOC101068731 [Takifugu rubripes]
Length = 379
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 87/148 (58%), Gaps = 11/148 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG +++IDLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGKLMEIDLK-----NGYGFVEFEDNRDADDAVYELNGKELCGERVIVEHARGPRRDRDF 79
Query: 63 MDRYSSYSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
S YSS G + R++YR++V L S SWQDLKD MR+AG+V ++ ++
Sbjct: 80 YGGGSGYSSRSRTGRDKYGPPVRTEYRLVVENLSSRCSWQDLKDFMRQAGEVTYADAHKE 139
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R G++++ S+ DMK A+ KLD ++
Sbjct: 140 RTN-EGVIEFRSHSDMKRALDKLDGTDI 166
>gi|198432077|ref|XP_002131581.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 332
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 28/165 (16%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR---- 58
+G I DI++K G+ F+EF+D RDA+DA+ + G R+ VELA G +R
Sbjct: 27 FGRITDINIK-----NGFCFVEFDDSRDADDAVYEMNNQMLCGERVTVELAKGTQRWGQE 81
Query: 59 ---------HSSSMDRYSSYSSGGSRGVSRR---------SDYRVLVTGLPSSASWQDLK 100
+ RG RR ++YRV+V L + +WQ+LK
Sbjct: 82 RRDYGGGRDYGRGDYGGGYGGRNNDRGFGRRQSKFAPPMRTEYRVIVENLSTRVAWQELK 141
Query: 101 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
DH+R+AG++ ++ + R G+VD+ SYDDMK AI K + +E
Sbjct: 142 DHLRQAGEITYADAHKHRRN-EGVVDFASYDDMKNAIEKFNNTEL 185
>gi|134083249|emb|CAK46820.1| unnamed protein product [Aspergillus niger]
Length = 367
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 112/217 (51%), Gaps = 33/217 (15%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS-- 61
G I +I L G+ F+E+ED DA D + DG +F G RL V+ A G RR +
Sbjct: 33 GKITEIKLMN-----GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFARGPRRKENFP 85
Query: 62 -SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRG 119
MDR + RR+ +R++V+GLP + SWQDLKD R++G DV +S+ R+ G
Sbjct: 86 GPMDR-------PNMPRPRRTIFRMMVSGLPET-SWQDLKDFARQSGLDVVYSETGRELG 137
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
G V++ + +D+K AI KLD EF+ + ++ Y R+ R PY R
Sbjct: 138 --RGFVEFETANDLKTAIEKLDGREFKGSRVTCIADIQTYPDERAI-----RDPY----R 186
Query: 180 SRSPYYSRSRSPSRSWSYS-PRSRSYSPRGKYSRRSP 215
SRSP RS P + P R YSPR Y RSP
Sbjct: 187 SRSP--RRSYPPMDEYDRRFPAPRGYSPRAHYRERSP 221
>gi|350633625|gb|EHA21990.1| hypothetical protein ASPNIDRAFT_56436 [Aspergillus niger ATCC 1015]
Length = 299
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 112/217 (51%), Gaps = 33/217 (15%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS-- 61
G I +I L G+ F+E+ED DA D + DG +F G RL V+ A G RR +
Sbjct: 33 GKITEIKLMN-----GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFARGPRRKENFP 85
Query: 62 -SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRG 119
MDR + RR+ +R++V+GLP + SWQDLKD R++G DV +S+ R+ G
Sbjct: 86 GPMDRPNMPRP-------RRTIFRMMVSGLPET-SWQDLKDFARQSGLDVVYSETGRELG 137
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
G V++ + +D+K AI KLD EF+ + ++ Y R+ R PY R
Sbjct: 138 --RGFVEFETANDLKTAIEKLDGREFKGSRVTCIADIQTYPDERAI-----RDPY----R 186
Query: 180 SRSPYYSRSRSPSRSWSYS-PRSRSYSPRGKYSRRSP 215
SRSP RS P + P R YSPR Y RSP
Sbjct: 187 SRSP--RRSYPPMDEYDRRFPAPRGYSPRAHYRERSP 221
>gi|83767572|dbj|BAE57711.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391867601|gb|EIT76847.1| alternative splicing factor SRp55/B52/SRp75 [Aspergillus oryzae
3.042]
Length = 298
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 111/217 (51%), Gaps = 34/217 (15%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS-- 61
G I +I L G+ F+E+ED DA D + DG +F G RL V+ A G RR +
Sbjct: 33 GKITEIKLMN-----GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFARGPRRKENFP 85
Query: 62 -SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRG 119
MDR + RR+ YR++V+GLP + SWQDLKD R AG DV +S+ R+ G
Sbjct: 86 GPMDRPNMPRP-------RRTVYRMMVSGLPET-SWQDLKDFARGAGLDVVYSETGREPG 137
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 179
G V++ + +D+K AI KLD +F+ + ++ D R P R PY R
Sbjct: 138 --RGFVEFETANDLKTAIEKLDGRDFKGSRVSCVADIQPVDER------PFRDPY----R 185
Query: 180 SRSPYYSRSRSPSRSWSYS-PRSRSYSPRGKYSRRSP 215
SRSP RS P + P R YSPR Y RSP
Sbjct: 186 SRSP--RRSYPPVDEYDRRFPPPRGYSPRAHYRERSP 220
>gi|410911524|ref|XP_003969240.1| PREDICTED: uncharacterized protein LOC101080136 isoform 2 [Takifugu
rubripes]
Length = 374
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 83/149 (55%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G G R+ VE G RR
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTKGPRRDGGY 79
Query: 63 MDRYSSYSSGGSR------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
R G R G R+DYR++V L S SWQDLKD+MR+AG+V ++ +
Sbjct: 80 SGRSKPRPGGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHK 139
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R G++++ Y DMK A+ KLD +E
Sbjct: 140 GRKN-EGVIEFRQYSDMKRALEKLDGTEV 167
>gi|403290688|ref|XP_003936440.1| PREDICTED: serine/arginine-rich splicing factor 6 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|390462611|ref|XP_003732879.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Callithrix jacchus]
Length = 344
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|68075657|ref|XP_679748.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56500569|emb|CAH96908.1| splicing factor, putative [Plasmodium berghei]
Length = 287
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I+ D+K +AF+EFED RDA DAI+ +DG +F G +LRVE+ R +
Sbjct: 31 FGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGCDFGGNKLRVEVPFNARDNGKY 90
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
R GS+ SRR Y V V+GLP S SWQDLKDH+R AG+ + VF++ G
Sbjct: 91 NSRGRGMMGRGSK--SRRGRYVVEVSGLPLSGSWQDLKDHLREAGECGHADVFKNGTG 146
>gi|241574285|ref|XP_002403076.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502149|gb|EEC11643.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 268
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 97/173 (56%), Gaps = 24/173 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR---- 58
YG + DI LK G+ F+EF+D+RDA+DAI +G G R+ VELA+G RR
Sbjct: 26 YGRVGDIHLK-----NGFGFVEFDDHRDADDAISDLNGKELLGERVSVELAYGSRRGPGG 80
Query: 59 -------HSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
S ++ +R G +R++Y+++V L S SWQDLKD+MR+AG+V
Sbjct: 81 RIVPPRPDWRSPPPRRPFAPRDTRFGPPQRTEYQLIVENLSSHVSWQDLKDYMRQAGEVT 140
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRR 163
++ + R G+V++ +Y DMK AI KLD ++ S R+R Y+ ++
Sbjct: 141 YADAHKIRPN-EGVVEFANYSDMKNAISKLDNTDL------SGRRIRLYEEKK 186
>gi|221057011|ref|XP_002259643.1| Splicing factor [Plasmodium knowlesi strain H]
gi|193809715|emb|CAQ40417.1| Splicing factor, putative [Plasmodium knowlesi strain H]
Length = 312
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 86/157 (54%), Gaps = 5/157 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+ D+K +AF+EFED RDA DAI+ +DG ++ G +LRVE+ R +
Sbjct: 31 YGNILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGSDYGGNKLRVEVPFNA-RDNGK 89
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
G SRR Y V V+GLP S SWQDLKDH+R AG+ + VF++
Sbjct: 90 YGPRGGRGMMGRGMRSRRGRYVVEVSGLPLSGSWQDLKDHLREAGECGHADVFKNG---I 146
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
G V + +DM AI K + S FR + +S + +RE
Sbjct: 147 GEVSFFHKEDMLEAIEKFNGSTFRSHEGEKSKITIRE 183
>gi|221130958|ref|XP_002164143.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Hydra magnipapillata]
Length = 264
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 85/143 (59%), Gaps = 9/143 (6%)
Query: 6 IVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM-- 63
+ D+++K+ GYAF+EFED RDA+DA+ D F G RL VE A G R
Sbjct: 38 LKDVNIKL-----GYAFVEFEDKRDADDAVYELDRKEFFGSRLTVEHAKHGPRADMDKRD 92
Query: 64 -DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DR + + RG +++R++VT L S W DLKD+ R AG+V F++ ++R G
Sbjct: 93 GDRRKGHENDRGRGRPYNTEWRLIVTNLSSRVGWMDLKDYFRSAGEVTFTKANKERVG-E 151
Query: 123 GIVDYTSYDDMKYAIRKLDRSEF 145
G+V++ SY +MK A++K D SEF
Sbjct: 152 GVVEFRSYREMKRALKKFDGSEF 174
>gi|71028610|ref|XP_763948.1| splicing factor [Theileria parva strain Muguga]
gi|68350902|gb|EAN31665.1| splicing factor, putative [Theileria parva]
Length = 257
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 81/148 (54%), Gaps = 16/148 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I+ +LK +AF+EF D RDA DAIR +DGY F G +LRVEL
Sbjct: 30 FGRIIYCELKKSYSGSPFAFIEFSDSRDARDAIRDKDGYEFHGKKLRVELPF-------- 81
Query: 63 MDRYSSY---SSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
RY SG +RR Y + VTGLP S SWQDLKDHMR AG+ + VFR
Sbjct: 82 --RYKDEPRRPSGRRYRTTRRGKYVLEVTGLPPSGSWQDLKDHMRDAGECGHADVFR--- 136
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRN 147
G G + + S DM YAI + D S FR+
Sbjct: 137 GGVGEITFFSRSDMDYAIERFDGSTFRS 164
>gi|70947849|ref|XP_743501.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56523027|emb|CAH75823.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 283
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 72/120 (60%), Gaps = 6/120 (5%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I+ D+K +AF+EFED RDA DAI+ +DG +F G +LRVE+ R +
Sbjct: 31 FGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGCDFGGNKLRVEVPFNARDNG-- 88
Query: 63 MDRYSSYSSG--GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+YSS G G SRR Y V V+GLP S SWQDLKDH+R AG+ + VF++ G
Sbjct: 89 --KYSSRGRGMMGRGSKSRRGRYVVEVSGLPLSGSWQDLKDHLREAGECGHADVFKNGTG 146
>gi|301104435|ref|XP_002901302.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262100777|gb|EEY58829.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 214
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 85/158 (53%), Gaps = 24/158 (15%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I + +K P RPP +AFL +E+ +DA DA+R + F G R+RVE++ G
Sbjct: 25 YGRITSVRIKFPARPPPFAFLTYENEQDASDAVRSMNNTTFGGSRIRVEMSRG------- 77
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
RG + YRV ++GLP + SWQDLKD +R+ GDV S V DR G
Sbjct: 78 ------IDDARPRG----TQYRVKISGLPDTMSWQDLKDFLRKGGDVVHSDV--DRRG-N 124
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
G + + D+M AIRKLD ++ VR+RE D
Sbjct: 125 GSASFATPDEMLRAIRKLDGTDLDG----ERVRIREDD 158
>gi|119628062|gb|EAX07657.1| splicing factor, arginine/serine-rich 4, isoform CRA_a [Homo
sapiens]
Length = 484
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 83/139 (59%), Gaps = 5/139 (3%)
Query: 11 LKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS 70
L++ P Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y
Sbjct: 18 LEVLHPAPRYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYG 77
Query: 71 ---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVD 126
SG + G R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+++
Sbjct: 78 YRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIE 136
Query: 127 YTSYDDMKYAIRKLDRSEF 145
+ SY DMK A+ KLD +E
Sbjct: 137 FVSYSDMKRALEKLDGTEV 155
>gi|431894401|gb|ELK04201.1| Splicing factor, arginine/serine-rich 6 [Pteropus alecto]
Length = 343
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 89/153 (58%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG +++IDLK GY F+EFED RDA+DA+ +G + G R+ VE A G RR
Sbjct: 25 YGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R+++R++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|348563835|ref|XP_003467712.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Cavia porcellus]
Length = 341
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|310772202|ref|NP_001006476.2| serine/arginine-rich splicing factor 5a [Gallus gallus]
gi|326920574|ref|XP_003206544.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 278
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 8/145 (5%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I LK G+ F+EFED+RDA+DAI +G R+ +E A R
Sbjct: 27 YGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGKELCDERVTIEHARARRGRGRF 81
Query: 63 MDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
R+S YS GS G R+++R++V L S SWQDLKD MR+AG+V + R+
Sbjct: 82 AQRFSYYSQSGSSRYGPPVRTEHRIIVENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRN 141
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEF 145
G+V++ SY DMK A+ KLD +E
Sbjct: 142 -EGVVEFASYSDMKSALEKLDGTEL 165
>gi|20127499|ref|NP_006266.2| serine/arginine-rich splicing factor 6 [Homo sapiens]
gi|307078161|ref|NP_001182497.1| splicing factor, arginine/serine-rich 6 [Pongo abelii]
gi|332209067|ref|XP_003253632.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Nomascus leucogenys]
gi|397511164|ref|XP_003825949.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan paniscus]
gi|426391709|ref|XP_004062210.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Gorilla gorilla gorilla]
gi|20981728|sp|Q13247.2|SRSF6_HUMAN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Pre-mRNA-splicing factor SRP55; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|13905094|gb|AAH06832.1| Splicing factor, arginine/serine-rich 6 [Homo sapiens]
gi|119596370|gb|EAW75964.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
gi|119596373|gb|EAW75967.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
Length = 344
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic
construct]
gi|61371415|gb|AAX43663.1| splicing factor arginine/serine-rich 6 [synthetic construct]
gi|61371422|gb|AAX43664.1| splicing factor arginine/serine-rich 6 [synthetic construct]
Length = 345
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|195451842|ref|XP_002073099.1| GK13948 [Drosophila willistoni]
gi|194169184|gb|EDW84085.1| GK13948 [Drosophila willistoni]
Length = 362
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 87/161 (54%), Gaps = 25/161 (15%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S+
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTAR-GSN 80
Query: 63 MDRYSSY-------------SSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMR 104
DRY + SR SR R++YR++V L S SWQDLKD+MR
Sbjct: 81 RDRYDDRYGNRRGGGGRYNDKNKNSRSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMR 140
Query: 105 RAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 141 QAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 180
>gi|359322750|ref|XP_003639908.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Canis
lupus familiaris]
Length = 344
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG +++IDLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R+++R++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|326482144|gb|EGE06154.1| pre-mRNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 304
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 107/213 (50%), Gaps = 22/213 (10%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E+ED DA+D + G +F G RL V+ A G RR
Sbjct: 33 GKITEIKLMQ-----GFGFIEYEDAMDAKDVVPAFHGTDFKGERLTVQFARGPRRREP-- 85
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ + RR+ YR+ +TGLP + SWQDLKD R++G DV +S+ RDR G
Sbjct: 86 --FPGPPERSAAPRPRRTIYRMQITGLPET-SWQDLKDFARQSGLDVVYSET-RDRDG-K 140
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G V++ + +D++ A+ KLD ++F+ + ++ R R PY SRS R
Sbjct: 141 GFVEFENGNDLRTAVEKLDGTDFKGSRVTCTADIQPPMEDRV-----PRDPYRSRSPRRG 195
Query: 183 PYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSP 215
P Y P + R YSPRG Y RSP
Sbjct: 196 PPY----PPVDEYDRRGPPRGYSPRGHYRERSP 224
>gi|410215040|gb|JAA04739.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410302392|gb|JAA29796.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410360346|gb|JAA44682.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 344
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|158255842|dbj|BAF83892.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|62087532|dbj|BAD92213.1| arginine/serine-rich splicing factor 6 variant [Homo sapiens]
Length = 279
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 59 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 113
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 114 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 173
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 174 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 205
>gi|345571438|gb|EGX54252.1| hypothetical protein AOL_s00004g285 [Arthrobotrys oligospora ATCC
24927]
Length = 377
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 109/211 (51%), Gaps = 18/211 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I +I L G+ F+E+ + DA D + G F RL V+ A G R +
Sbjct: 49 HGTIQEIKLMN-----GFGFIEYSNPSDARDIVPIFHGKEFMDSRLTVQFARGPRPTRND 103
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGM 121
+ SG RR+ YR+ ++GLP+ SWQDLKD R++G DV FS+V R+R G
Sbjct: 104 F----NGPSGDRTPRPRRTPYRMNISGLPTDTSWQDLKDFARKSGVDVVFSEVSRNRDG- 158
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 181
+GIV++ + DD++ AI KLD +F+ S ++ + R SRSP P R
Sbjct: 159 SGIVEFETADDLRIAINKLDNYDFKGGRV-SCTSDQQARNSRGRSRSP---PPAGRRNGY 214
Query: 182 SPYYSRSRSPSRSWSYSPR---SRSYSPRGK 209
SP R SP R YSP R YSPRG+
Sbjct: 215 SPREGRGYSPGRRGGYSPHRGGDRGYSPRGR 245
>gi|56270156|gb|AAH87121.1| Splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
Length = 339
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 97/175 (55%), Gaps = 24/175 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG +++IDLK GY F+EFED RDA+DA+ + G R+ VE A G RR
Sbjct: 25 YGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF--RNAFSRSYVRVREYDSRRSY 165
++R G++++ SY DMK A+ KLD +E RN +R+ EY R S+
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEINGRN------IRLIEYKPRTSH 187
>gi|116175261|ref|NP_001070685.1| serine/arginine-rich splicing factor 6 [Sus scrofa]
gi|115371751|gb|ABI96200.1| SFRS6 [Sus scrofa]
Length = 345
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG +++IDLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R+++R++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|402882500|ref|XP_003904778.1| PREDICTED: serine/arginine-rich splicing factor 6 [Papio anubis]
gi|380815566|gb|AFE79657.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|380815568|gb|AFE79658.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420733|gb|AFH33580.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420735|gb|AFH33581.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948770|gb|AFI37990.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948772|gb|AFI37991.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
Length = 343
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|442749577|gb|JAA66948.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 268
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 97/173 (56%), Gaps = 24/173 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR---- 58
YG + DI LK G+ F+EF+D+RDA+DAI +G G R+ VELA+G RR
Sbjct: 26 YGRVGDIHLK-----NGFGFVEFDDHRDADDAISDLNGKELLGERVSVELAYGSRRGPGG 80
Query: 59 -------HSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
S ++ +R G +R++Y+++V L S SWQDLKD+MR+AG+V
Sbjct: 81 RIVPPRPDWRSPPPRRPFAPRDTRFGPPQRTEYQLIVENLSSHVSWQDLKDYMRQAGEVT 140
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRR 163
++ + R G+V++ +Y DMK AI KLD ++ S R+R Y+ ++
Sbjct: 141 YADAHKIRPN-EGVVEFANYSDMKNAISKLDNTDL------SGRRIRLYEEKK 186
>gi|395522106|ref|XP_003765081.1| PREDICTED: serine/arginine-rich splicing factor 4 [Sarcophilus
harrisii]
Length = 338
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR 75
GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 31 GYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDK 90
Query: 76 -GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMK 134
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK
Sbjct: 91 YGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMK 149
Query: 135 YAIRKLDRSEF 145
A+ KLD +E
Sbjct: 150 RALEKLDGTEV 160
>gi|296481070|tpg|DAA23185.1| TPA: splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG +++IDLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R+++R++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|449488807|ref|XP_002189002.2| PREDICTED: serine/arginine-rich splicing factor 4 [Taeniopygia
guttata]
Length = 446
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%), Gaps = 13/134 (9%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG-GSRGVS 78
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR SS Y S SG G R
Sbjct: 6 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDSS----YGSGRSGYGYRRSG 61
Query: 79 R-------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYD 131
R R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY
Sbjct: 62 RDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFKSYS 120
Query: 132 DMKYAIRKLDRSEF 145
DMK A+ KLD +E
Sbjct: 121 DMKRALEKLDGTEV 134
>gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus]
Length = 339
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 87/153 (56%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG +++IDLK GY F+EFED RDA+DA+ + G R+ VE A G RR
Sbjct: 25 YGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|198415633|ref|XP_002121331.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
[Ciona intestinalis]
Length = 292
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 86/170 (50%), Gaps = 33/170 (19%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I DI+LK GY F+EF+D RDA+DA+ + + G R+ VELA G R S
Sbjct: 27 FGKIRDINLK-----NGYGFVEFDDSRDADDAVYEMNNRDLCGERVTVELARGVPRSSGG 81
Query: 63 MD---------------------------RYSSYSSGGSRGVSRRSDYRVLVTGLPSSAS 95
D Y + G G R++YRV+V L + S
Sbjct: 82 RDYRPDFRNDYRNDYRRRDDRGGGGGGRVNYFDSRAIGKYGPPTRTNYRVIVENLSTRVS 141
Query: 96 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
WQDLKD++R AG+V ++ + R G+VD+ +YDDMK AI KLD +E
Sbjct: 142 WQDLKDYLREAGEVTYADAHKHRRN-EGVVDFATYDDMKRAIDKLDNTEI 190
>gi|348510431|ref|XP_003442749.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Oreochromis
niloticus]
Length = 342
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 87/152 (57%), Gaps = 15/152 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR---- 58
YG +++IDLK GY F+EFED RDA+DA+ +G G R+ +E A G RR
Sbjct: 25 YGKLLEIDLK-----NGYGFVEFEDMRDADDAVYELNGKELCGERVVIEHARGPRRDGYG 79
Query: 59 ---HSSSMDRYSSYSSGG--SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 113
H YSS++ G G R+++R++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YGGHQGDGGGYSSWNRTGRDKYGPPVRTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYAD 139
Query: 114 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ R G++++ S DMK A+ KLD ++
Sbjct: 140 AHKGRAN-EGVIEFRSRSDMKRALEKLDGTDI 170
>gi|427777525|gb|JAA54214.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 333
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 85/165 (51%), Gaps = 38/165 (23%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DI LK G+ F++ DYRDAEDA+R +G G R+ VELA G RR
Sbjct: 26 YGRIEDIVLK-----NGFGFVDISDYRDAEDAVRDLNGKRLMGERVTVELARGMRRGPPD 80
Query: 63 MDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS-------- 112
DR G R G R++Y++LV L +S SWQDLKD MR+AGDV ++
Sbjct: 81 YDR-------GPRRFGPPTRTNYQLLVENLSTSVSWQDLKDFMRQAGDVTYTXNLSTSVS 133
Query: 113 -----QVFRDRGGMT-----------GIVDYTSYDDMKYAIRKLD 141
R G +T G+V++ SY DMK A+R LD
Sbjct: 134 WQDLKDFMRQAGDVTYTDAHKLRRHQGVVEFASYSDMKNALRSLD 178
>gi|326471023|gb|EGD95032.1| pre-RNA splicing factor Srp2 [Trichophyton tonsurans CBS 112818]
Length = 317
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 108/213 (50%), Gaps = 24/213 (11%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E+ED DA+D + DG +F G RL V+ A G RR
Sbjct: 48 GKITEIKLMQ-----GFGFIEYEDAMDAKDVVP--DGTDFKGERLTVQFARGPRRREP-- 98
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ + RR+ YR+ +TGLP + SWQDLKD R++G DV +S+ RDR G
Sbjct: 99 --FPGPPERSAAPRPRRTIYRMQITGLPET-SWQDLKDFARQSGLDVVYSET-RDRDG-K 153
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G V++ + +D++ A+ KLD ++F+ + ++ R R PY SRS R
Sbjct: 154 GFVEFENGNDLRTAVEKLDGTDFKGSRVTCTADIQPPMEDRV-----PRDPYRSRSPRRG 208
Query: 183 PYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSP 215
P Y P + R YSPRG Y RSP
Sbjct: 209 PPYP----PVDEYDRRGPPRGYSPRGHYRERSP 237
>gi|189233695|ref|XP_001812208.1| PREDICTED: similar to B52 CG10851-PA [Tribolium castaneum]
Length = 300
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 86/150 (57%), Gaps = 13/150 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
YG I ++ +K G+AF+EF+DYRDA+DA+ +G G R+ VE A G R
Sbjct: 26 YGRIKEVAMK-----NGFAFVEFDDYRDADDAVYELNGKELLGERVSVERARGTPRGCDQ 80
Query: 62 ---SMDRYSSYSSGGSR---GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
S R G SR G R++YR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 81 WRGSGGRGYGPPRGRSRDKYGPPTRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAH 140
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ R G+V++ SY DMK AI KLD +E
Sbjct: 141 KQRRN-EGVVEFASYSDMKNAIDKLDDTEL 169
>gi|241574282|ref|XP_002403075.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502148|gb|EEC11642.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 364
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 14/148 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I +I +K G+ F+EF+D RDA+DA+ +G + G R+ VELA G RR +
Sbjct: 26 FGRIREISIK-----NGFGFVEFDDPRDADDAVYELNGKDLMGDRVSVELARGIRRGA-- 78
Query: 63 MDRYSSYSSGGSR-----GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
D Y S S+ S G R++Y++ V L S SWQDLKD+MR+AG+V ++ +
Sbjct: 79 -DYYRSRSTAPSPPRRRYGPPTRTEYQLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKL 137
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R G+V++ +Y DMK A+ KLD ++
Sbjct: 138 RRN-EGVVEFATYSDMKNALDKLDNTDL 164
>gi|412989158|emb|CCO15749.1| predicted protein [Bathycoccus prasinos]
Length = 347
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 87/180 (48%), Gaps = 26/180 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL---------- 52
YG IV I + PP +AF+EFED RDAEDA RDGY FDG RLRVE+
Sbjct: 38 YGRIVHIKMPRCNHPPAFAFIEFEDKRDAEDAQYYRDGYEFDGNRLRVEISKGSSGGGGF 97
Query: 53 --------------AHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQD 98
GGR S+ +R GS RR+++ V+V LP ASWQD
Sbjct: 98 GGTRDDRGGGERGGRGGGRFGGSADERGGGRGGRGSFERPRRTEFCVVVRNLPPRASWQD 157
Query: 99 LKDHMRRAGDVCFSQVFRD--RGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 156
LKD RR+G V ++ F D G G VD+ D + A D EF N F S ++
Sbjct: 158 LKDFFRRSGKVTYANAFIDSNTGEQIGEVDFEYLTDAENACDDCDGIEFENRFGVSKIQC 217
>gi|449274709|gb|EMC83787.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 257
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 84/145 (57%), Gaps = 8/145 (5%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I LK G+ F+EFED+RDA+DAI +G R+ +E A R
Sbjct: 27 YGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGKELCDERVTIEHARARRGRGRF 81
Query: 63 MDRYSSY-SSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
R+S Y S GSR G R+++R++V L S SWQDLKD MR+AG+V + R+
Sbjct: 82 SQRFSYYPSQSGSRYGPPIRTEHRIIVENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRN 141
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEF 145
G+V++ SY DMK A+ KLD +E
Sbjct: 142 -EGVVEFASYSDMKSALEKLDGTEL 165
>gi|417399301|gb|JAA46673.1| Putative serine/arginine-rich splicing factor 6 [Desmodus rotundus]
Length = 345
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 89/153 (58%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG +++IDLK GY F+EFED RDA+DA+ +G + G R+ VE A G RR
Sbjct: 25 YGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R+++R++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|91091338|ref|XP_966697.1| PREDICTED: similar to hnRNP protein [Tribolium castaneum]
Length = 282
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 82/143 (57%), Gaps = 6/143 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + D+ +K GY F+EF+D+RDA+DA+ +G G R+ VE A G R
Sbjct: 27 YGRMRDVLIK-----NGYGFVEFDDHRDADDAVYELNGKKLLGERVTVERARGTPRGRDQ 81
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
S + S G R++YR++V L S SWQDLKD+MR+AG+V ++ +
Sbjct: 82 WSSRSDHRSHERYGPPTRTNYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRN-E 140
Query: 123 GIVDYTSYDDMKYAIRKLDRSEF 145
G+V++ SY D+K AI KLD +E
Sbjct: 141 GVVEFASYSDLKNAIEKLDDTEL 163
>gi|300123677|emb|CBK24949.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 87/157 (55%), Gaps = 17/157 (10%)
Query: 2 MYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
+G I DI +K + YAF+EF +A++A + +F G +RVE G R
Sbjct: 25 QFGEITDIAIKDRGQGAVYAFVEFSKEEEADNAQSSLNSTHFMGRDIRVEYTRGLR---- 80
Query: 62 SMDRYSSYSSGGS--RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
YS+G S RG RR+DYR+ VT LP + SWQDLKD+M R G V + + R
Sbjct: 81 -------YSTGDSIRRGPPRRTDYRIEVTHLPHNCSWQDLKDYMSRIGPVGYCDI---RH 130
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 156
G G+V++ Y+DMK A+RKLD ++ + +Y+ V
Sbjct: 131 GY-GVVEFIHYEDMKRAVRKLDDTKMYSNGESNYIHV 166
>gi|196004628|ref|XP_002112181.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
gi|190586080|gb|EDV26148.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
Length = 266
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 87/147 (59%), Gaps = 9/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR---RH 59
+G I ++ LK G+ F+EF+D RDAEDAI + + G R+ VE A G R R
Sbjct: 25 FGKIREVTLK-----NGFGFVEFDDPRDAEDAIYELNNRDLMGERVIVEFAKGTRYDDRR 79
Query: 60 SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
+ SY R G R +++R+++ L S A+W+D+KD+MR+AGDV F+ +
Sbjct: 80 GAYPLITPSYLLFRPRFGRPRNTEWRLVINNLSSRATWRDIKDYMRQAGDVTFADAHKQL 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G G+VD+ +YDDMK A+++LD +E
Sbjct: 140 GEGRGVVDFATYDDMKDALKRLDGTEL 166
>gi|395829006|ref|XP_003787652.1| PREDICTED: serine/arginine-rich splicing factor 6 [Otolemur
garnettii]
Length = 345
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ +LD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDRLDGTEI 171
>gi|171849000|pdb|3BEG|B Chain B, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 115
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 78 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 137
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 12 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAV 68
Query: 138 RKLDRSEFR-NAFSRSYVRVR 157
RKLD ++FR + +Y+RV+
Sbjct: 69 RKLDNTKFRSHEGETAYIRVK 89
>gi|348683415|gb|EGZ23230.1| hypothetical protein PHYSODRAFT_556082 [Phytophthora sojae]
Length = 222
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 23/159 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I + +K P RPP +AF+ +++ DA DA+R G G RLRVE++ G
Sbjct: 25 FGRISSVRIKFPTRPPPFAFIAYDNEEDASDAVRSMHGAMLSGCRLRVEMSRG------- 77
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
RG + YRV ++GLP++ SWQDLKD +R+ GDV S V DR G
Sbjct: 78 -----LVDDARPRG----TQYRVKISGLPATMSWQDLKDFLRKGGDVVHSDV--DRRG-N 125
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 161
G + + D+M+ AIR+LD ++ VRVRE D+
Sbjct: 126 GTASFATSDEMRRAIRQLDGTDLDG----ERVRVREEDA 160
>gi|395505264|ref|XP_003756963.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Sarcophilus harrisii]
Length = 340
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDA+DA+ +G + G R+ VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S ++G + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRGGGGGYSSRRATGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|442754133|gb|JAA69226.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 363
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 14/148 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I +I +K G+ F+EF+D RDA+DA+ +G + G R+ VELA G RR +
Sbjct: 26 FGRIREISIK-----NGFGFVEFDDPRDADDAVYELNGKDLMGDRVSVELARGIRRGA-- 78
Query: 63 MDRYSSYSSGGSR-----GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
D Y S S+ S G R++Y++ V L S SWQDLKD+MR+AG+V ++ +
Sbjct: 79 -DYYRSRSTAPSPPRRRYGPPTRTEYQLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKL 137
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R G+V++ +Y DMK A+ KLD ++
Sbjct: 138 RRN-EGVVEFATYSDMKNALDKLDNTDL 164
>gi|159163317|pdb|1WG4|A Chain A, Solution Structure Of Rrm Domain In Protein Bab31986
Length = 98
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 78 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 137
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 11 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 67
Query: 138 RKLDRSEFR-NAFSRSYVRV 156
RKLD ++FR + SY+RV
Sbjct: 68 RKLDDTKFRSHEGETSYIRV 87
>gi|78099805|sp|P26686.4|SRR55_DROME RecName: Full=Serine-arginine protein 55; Short=SRP55; AltName:
Full=52 kDa bracketing protein; AltName: Full=B52
protein; AltName: Full=Protein enhancer of deformed
Length = 376
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 24/161 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S+
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSNR 81
Query: 63 MDRYS-------------SYSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMR 104
+ + SR SR R++YR++V L S SWQDLKD+MR
Sbjct: 82 DRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMR 141
Query: 105 RAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 142 QAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 181
>gi|347972221|ref|XP_003436860.1| AGAP004592-PE [Anopheles gambiae str. PEST]
gi|333469348|gb|EGK97259.1| AGAP004592-PE [Anopheles gambiae str. PEST]
Length = 351
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 86/159 (54%), Gaps = 22/159 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGPSG 81
Query: 62 --------------SMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRA 106
D+Y S S SR G R++YR++V L + SWQDLKD+MR+A
Sbjct: 82 YRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYRLVVENLSTRVSWQDLKDYMRQA 141
Query: 107 GDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G+V ++ + R G+V++ + DMK AI KLD +E
Sbjct: 142 GEVTYADAHKQRKN-EGVVEFATLSDMKTAIEKLDDTEL 179
>gi|22268151|gb|AAH26944.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR- 75
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 37 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKY 96
Query: 76 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 135
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK
Sbjct: 97 GPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKR 155
Query: 136 AIRKLDRSEF 145
A+ KLD +E
Sbjct: 156 ALEKLDGTEV 165
>gi|169404002|ref|NP_955868.1| serine/arginine-rich splicing factor 4 [Danio rerio]
gi|326676581|ref|XP_003200617.1| PREDICTED: hypothetical protein LOC321872 [Danio rerio]
gi|28461393|gb|AAH46895.1| Zgc:55809 [Danio rerio]
gi|182890456|gb|AAI64410.1| Zgc:55809 protein [Danio rerio]
Length = 366
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 13/150 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE G RR +
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGKDLCGKRVIVEHTIGQRRDGGN 79
Query: 63 MDRYSSYSSGGSRGVSR-------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
S+ G G R+DYR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 80 RSGRSNRYGRGGGGGGGDRYGPPTRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTN 139
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ R G++++ Y DMK A+ KLD +E
Sbjct: 140 KGRKN-EGVIEFRQYSDMKRALEKLDGTEV 168
>gi|7637|emb|CAA44483.1| 52-kD bracketing protein [Drosophila melanogaster]
Length = 376
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 24/161 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S+
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSNR 81
Query: 63 MDRYS-------------SYSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMR 104
+ + SR SR R++YR++V L S SWQDLKD+MR
Sbjct: 82 DRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMR 141
Query: 105 RAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 142 QAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 181
>gi|402219133|gb|EJT99207.1| hypothetical protein DACRYDRAFT_23817 [Dacryopinax sp. DJM-731 SS1]
Length = 319
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 91/182 (50%), Gaps = 26/182 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DI + G+ F+EFE+ +DAED + G N G + +ELA RR
Sbjct: 27 YGRIQDIRIMN-----GFGFVEFENPKDAEDVVANFQGKNLLGEPIIIELAKESRRE--- 78
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R + G R +RR YRVL+ G+ SWQDLKD R AG V FS + R+ G
Sbjct: 79 --RGGGFEERGPRPFTRRPGYRVLIHGVSRDTSWQDLKDFGREAGAVTFSDLDRENPG-E 135
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSR-------------SYVRVREYDSRRSYSRSP 169
GI++Y + DD++ A+R L+ E R R Y R +E+ RR SRSP
Sbjct: 136 GILEYLTPDDLENALRLLNNRELRGVTVRVSRGEGGLGGSGVDYSRDKEF--RRDRSRSP 193
Query: 170 SR 171
R
Sbjct: 194 GR 195
>gi|126291113|ref|XP_001371339.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Monodelphis
domestica]
Length = 340
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDA+DA+ +G + G R+ VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S ++G + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRGGGGGYSSRRATGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|449502441|ref|XP_002200515.2| PREDICTED: serine/arginine-rich splicing factor 4-like [Taeniopygia
guttata]
Length = 277
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 85/146 (58%), Gaps = 9/146 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I LK G+ F+EFED+RDA+DAI +G R+ +E A R
Sbjct: 27 YGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGKELCDERVTIEHARARRGRGRF 81
Query: 63 MDRYSSY--SSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
R+S Y +SG SR G R+++R++V L S SWQDLKD MR+AG+V + R+
Sbjct: 82 SQRFSYYQSTSGSSRYGPPVRTEHRIIVENLSSRISWQDLKDVMRKAGEVTYVDAHRNNR 141
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEF 145
G+V++ SY DMK A+ KLD +E
Sbjct: 142 N-EGVVEFASYSDMKSALEKLDGTEL 166
>gi|270014159|gb|EFA10607.1| hypothetical protein TcasGA2_TC012868 [Tribolium castaneum]
Length = 424
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 82/143 (57%), Gaps = 6/143 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + D+ +K GY F+EF+D+RDA+DA+ +G G R+ VE A G R
Sbjct: 27 YGRMRDVLIK-----NGYGFVEFDDHRDADDAVYELNGKKLLGERVTVERARGTPRGRDQ 81
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
S + S G R++YR++V L S SWQDLKD+MR+AG+V ++ +
Sbjct: 82 WSSRSDHRSHERYGPPTRTNYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRN-E 140
Query: 123 GIVDYTSYDDMKYAIRKLDRSEF 145
G+V++ SY D+K AI KLD +E
Sbjct: 141 GVVEFASYSDLKNAIEKLDDTEL 163
>gi|195036928|ref|XP_001989920.1| GH18528 [Drosophila grimshawi]
gi|193894116|gb|EDV92982.1| GH18528 [Drosophila grimshawi]
Length = 360
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 84/156 (53%), Gaps = 20/156 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S+
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTAR-GSN 80
Query: 63 MDRYSSY-------------SSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
DRY S G R++YR++V L S SWQDLKD+MR+AG+V
Sbjct: 81 RDRYEDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEV 140
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ + R G+V++ S DMK AI KLD +E
Sbjct: 141 TYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 175
>gi|449486099|ref|XP_002195735.2| PREDICTED: serine/arginine-rich splicing factor 6 [Taeniopygia
guttata]
Length = 348
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 87/154 (56%), Gaps = 17/154 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDA+DA+ +G + G R+ VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARGPRRDRDG 79
Query: 60 -------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
S SG + G R+++R++V L S SWQDLKD MR+AG+V +
Sbjct: 80 YSYSSRSGGGGGYSSRRQSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTY 139
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ ++R G++++ SY DMK A+ KLD +E
Sbjct: 140 ADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 172
>gi|341902095|gb|EGT58030.1| CBN-RSP-3 protein [Caenorhabditis brenneri]
Length = 275
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 90/149 (60%), Gaps = 10/149 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG------G 56
YG ++ +D+K + +AF+ + D+RDA+DA+ D +++ G LRVE + G G
Sbjct: 30 YGRVLYVDIK-NGKISRFAFVAYRDFRDADDAVNYLDKFDYHGRSLRVEHSTGVGPRGWG 88
Query: 57 RRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
+ SS++ + + G G RRSD+RV V G+P + SWQDLKDH R AG++CF+ +
Sbjct: 89 GQPLSSINGDNFRIARGPGGPQRRSDFRVFVEGIPQTGSWQDLKDHFRPAGEICFAMISH 148
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ TGIV++ ++ +I D++EF
Sbjct: 149 NK---TGIVEFEKKSSVQRSIDIFDKTEF 174
>gi|146323402|ref|XP_754610.2| pre-RNA splicing factor Srp2 [Aspergillus fumigatus Af293]
gi|129558308|gb|EAL92572.2| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
Af293]
gi|159127623|gb|EDP52738.1| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
A1163]
Length = 272
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 110/214 (51%), Gaps = 28/214 (13%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E+ED DA D + DG +F G RL V+ A G RR +
Sbjct: 8 GKITEIKLMN-----GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFARGPRRKEN-- 58
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ + RR+ +R+LV+GLP + SWQDLKD R++G DV +S+ R++G
Sbjct: 59 --FPGPPDRPNMPRPRRTIFRMLVSGLPET-SWQDLKDFARQSGLDVVYSETGREQG--R 113
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G V++ + D+K AI KLD EF+ + ++ +D R R PY RSRS
Sbjct: 114 GFVEFETAADLKTAIDKLDGREFKGSRVSCVADIQPHDDRI------FRDPY----RSRS 163
Query: 183 PYYSRSRSPSRSWSYS-PRSRSYSPRGKYSRRSP 215
P RS P + P R YSPR Y RSP
Sbjct: 164 P--RRSYPPIDEYDRRFPAPRGYSPRAHYRERSP 195
>gi|386765708|ref|NP_788671.2| B52, isoform M [Drosophila melanogaster]
gi|386765712|ref|NP_001014619.2| B52, isoform O [Drosophila melanogaster]
gi|312596948|gb|ADQ89797.1| GH20537p [Drosophila melanogaster]
gi|383292689|gb|AAN13579.2| B52, isoform M [Drosophila melanogaster]
gi|383292691|gb|AAX52949.2| B52, isoform O [Drosophila melanogaster]
Length = 355
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 24/161 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S+
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSNR 81
Query: 63 MDRYS-------------SYSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMR 104
+ + SR SR R++YR++V L S SWQDLKD+MR
Sbjct: 82 DRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMR 141
Query: 105 RAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 142 QAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 181
>gi|158429186|pdb|2O3D|A Chain A, Structure Of Human Sf2ASF RNA RECOGNITION MOTIF 2 (RRM2)
Length = 113
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 78 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 137
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 11 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 67
Query: 138 RKLDRSEFR-NAFSRSYVRVR 157
RKLD ++FR + +Y+RV+
Sbjct: 68 RKLDNTKFRSHEGETAYIRVK 88
>gi|90076960|dbj|BAE88160.1| unnamed protein product [Macaca fascicularis]
Length = 182
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 78 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 137
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 45 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 101
Query: 138 RKLDRSEFR-NAFSRSYVRVR 157
RKLD ++FR + +Y+RV+
Sbjct: 102 RKLDNTKFRSHEGETAYIRVK 122
>gi|340378226|ref|XP_003387629.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Amphimedon
queenslandica]
Length = 309
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 86/155 (55%), Gaps = 18/155 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I DI+LK G+ F+EF+DYRDAEDA+ G G R+ VE A G R
Sbjct: 28 FGRIRDINLK-----NGFGFVEFDDYRDAEDAVYELHGRELLGERVIVEHARGNRDRDDY 82
Query: 63 -----------MDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
DR S S+ G R+D+R+LV + S SWQDLKD MR AG++
Sbjct: 83 RDRRGGGRDFRQDRGRDGRSNASKYGPPLRTDFRILVENVSSRVSWQDLKDFMRTAGEIT 142
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ + + G GIV+Y +Y+DMK AIRKL+ ++
Sbjct: 143 YADAHKQKTG-EGIVEYATYEDMKNAIRKLNGTDL 176
>gi|224967104|ref|NP_080775.3| arginine/serine-rich splicing factor 6 [Mus musculus]
gi|306922366|ref|NP_001014207.2| splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
gi|74197209|dbj|BAE35148.1| unnamed protein product [Mus musculus]
gi|74228832|dbj|BAE21902.1| unnamed protein product [Mus musculus]
gi|148674361|gb|EDL06308.1| splicing factor, arginine/serine-rich 6 [Mus musculus]
gi|149043026|gb|EDL96600.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_a [Rattus norvegicus]
Length = 339
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 87/153 (56%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG +++IDLK GY F+EFED RDA+DA+ + G R+ VE A G RR
Sbjct: 25 YGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus]
Length = 339
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 87/153 (56%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG +++IDLK GY F+EFED RDA+DA+ + G R+ VE A G RR
Sbjct: 25 YGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|15080592|gb|AAH12039.1| Splicing factor, arginine/serine-rich 6 [Mus musculus]
Length = 339
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 87/153 (56%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG +++IDLK GY F+EFED RDA+DA+ + G R+ VE A G RR
Sbjct: 25 YGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|308499132|ref|XP_003111752.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
gi|308239661|gb|EFO83613.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
Length = 317
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 75/116 (64%), Gaps = 10/116 (8%)
Query: 71 SGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSY 130
SG G RRSDYR++V GLP S SWQD+KDH+R AGD+C++ V R GIV++T
Sbjct: 147 SGRQGGPLRRSDYRLIVEGLPPSGSWQDVKDHLREAGDICYANVENGR----GIVEFTRA 202
Query: 131 DDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYY 185
+DM AIRK D ++ + + +Y+RV+E D+R S SRSP SR RSRS Y
Sbjct: 203 EDMHKAIRKFDDTKLKSHKGETAYIRVKE-DTRSSRSRSPK----TSRRRSRSNTY 253
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 3 YGPIVDIDLKI-PPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YG I ++++K +AF++F+ +RDA++A+R RDGY+FDG RLRVE
Sbjct: 30 YGDIRNVEVKTRHGETHSFAFVQFDSHRDAKEAVRSRDGYDFDGKRLRVEF 80
>gi|1049088|gb|AAA93073.1| SRp55-1 [Homo sapiens]
Length = 344
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 87/153 (56%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDA+DA+ +G G + VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGEHVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|391330800|ref|XP_003739841.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Metaseiulus
occidentalis]
Length = 303
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 84/155 (54%), Gaps = 27/155 (17%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG------- 55
YG I +I LK G+AF+EFED RDAEDA +G + G R+ VE+A G
Sbjct: 30 YGRIREILLK-----SGFAFVEFEDTRDAEDACYELNGKDLLGDRIVVEMAKGTERGRGG 84
Query: 56 ----GRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVC 110
G+R MD+Y + +R+DYRV+V L + SWQDLKD MR+ G +VC
Sbjct: 85 LPMRGQRDKGWMDKYGPF---------KRTDYRVIVGNLSTRVSWQDLKDMMRKVGCEVC 135
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ + R ++++ + DMK AI+K D E
Sbjct: 136 YADAHKHRKN-EAVIEFATRSDMKRAIQKYDGHEV 169
>gi|149053808|gb|EDM05625.1| rCG34610, isoform CRA_d [Rattus norvegicus]
Length = 181
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 78 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 137
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 49 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 105
Query: 138 RKLDRSEFR-NAFSRSYVRVR 157
RKLD ++FR + +Y+RV+
Sbjct: 106 RKLDNTKFRSHEGETAYIRVK 126
>gi|47220462|emb|CAG03242.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1292
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 86/155 (55%), Gaps = 18/155 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR---- 58
YG +++IDLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGKLMEIDLK-----NGYGFVEFEDNRDADDAVYELNGKELCGERVIVEHARGPRRDRDF 79
Query: 59 -------HSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
S S +G + G R++YR++V L S SWQDLKD MR+AG+V
Sbjct: 80 YGGGYGGGGRSSSYNSRSRTGRDKYGPPVRTEYRLVVENLSSRCSWQDLKDFMRQAGEVT 139
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ ++ G++++ SY DMK A+ KLD ++
Sbjct: 140 YADAHKEHTN-EGVIEFRSYSDMKRALDKLDGTDI 173
>gi|119491909|ref|XP_001263449.1| pre-RNA splicing factor Srp2, putative [Neosartorya fischeri NRRL
181]
gi|119411609|gb|EAW21552.1| pre-RNA splicing factor Srp2, putative [Neosartorya fischeri NRRL
181]
Length = 258
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 106/199 (53%), Gaps = 23/199 (11%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 78
G+ F+E+ED DA D + DG +F G RL V+ A G RR + + + +
Sbjct: 3 GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFARGPRRKEN----FPGPTDRPNMPRP 56
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 137
RR+ +R+LV+GLP + SWQDLKD R++G DV +S+ R++G G V++ + D+K AI
Sbjct: 57 RRTIFRMLVSGLPET-SWQDLKDFARQSGLDVVYSETGREQG--RGFVEFETAADLKTAI 113
Query: 138 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 197
KLD EF+ + ++ +D R R PY RSRSP RS P +
Sbjct: 114 DKLDGREFKGSRVSCVADIQPHDDRI------FRDPY----RSRSP--RRSYPPIDEYDR 161
Query: 198 S-PRSRSYSPRGKYSRRSP 215
P R YSPR Y RSP
Sbjct: 162 RFPAPRGYSPRAHYRERSP 180
>gi|78369222|ref|NP_001030349.1| serine/arginine-rich splicing factor 6 [Bos taurus]
gi|122145041|sp|Q3B7L6.1|SRSF6_BOVIN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|77567850|gb|AAI07554.1| Splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 87/153 (56%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++ IDLK GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGRLLGIDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R+++R++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|345793997|ref|XP_865416.2| PREDICTED: serine/arginine-rich splicing factor 4 isoform 3 [Canis
lupus familiaris]
Length = 469
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR- 75
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 6 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKY 65
Query: 76 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 135
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK
Sbjct: 66 GPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKR 124
Query: 136 AIRKLDRSEF 145
A+ KLD +E
Sbjct: 125 ALEKLDGTEV 134
>gi|8497|emb|CAA41556.1| SRp55 [Drosophila melanogaster]
Length = 350
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 82/156 (52%), Gaps = 19/156 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S+
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGSARGSNR 81
Query: 63 MDRYS-------------SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
+ S G R++YR++V L S SWQDLKD+MR+AG+V
Sbjct: 82 DRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEV 141
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ + R G+V++ S DMK AI KLD +E
Sbjct: 142 TYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 176
>gi|1049086|gb|AAA93072.1| SRp55-3, partial [Homo sapiens]
Length = 335
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 87/153 (56%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F+EFED RDA+DA+ +G G + VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGKELCGEHVIVEHARGPRRDRDG 79
Query: 60 ------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 80 YSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 140 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 171
>gi|195113427|ref|XP_002001269.1| GI22065 [Drosophila mojavensis]
gi|193917863|gb|EDW16730.1| GI22065 [Drosophila mojavensis]
Length = 361
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 84/160 (52%), Gaps = 23/160 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S+
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSNR 81
Query: 63 M-----------------DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRR 105
D+ + S G R++YR++V L S SWQDLKD+MR+
Sbjct: 82 DRYDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQ 141
Query: 106 AGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 142 AGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 180
>gi|367029667|ref|XP_003664117.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
gi|347011387|gb|AEO58872.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
Length = 296
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 81/146 (55%), Gaps = 14/146 (9%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G +F G RL V+ A G R
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSDFMGERLTVQFARGSRHREHGH 87
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
DR S+ RR+ +R+ +TGLP+ SWQDLKD R++G DV +S+ R+ GG
Sbjct: 88 DRNSAPRP-------RRTPHRMQITGLPNDTSWQDLKDFARQSGADVVYSETNRN-GGTE 139
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNA 148
G V++ + D++ A+ KLD EF+N
Sbjct: 140 GFVEFETAADLRTAVEKLDGREFKNV 165
>gi|28571691|ref|NP_788668.1| B52, isoform B [Drosophila melanogaster]
gi|7299789|gb|AAF54968.1| B52, isoform B [Drosophila melanogaster]
Length = 329
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 24/161 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S+
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSNR 81
Query: 63 MDRYS-------------SYSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMR 104
+ + SR SR R++YR++V L S SWQDLKD+MR
Sbjct: 82 DRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMR 141
Query: 105 RAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 142 QAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 181
>gi|112982956|ref|NP_001037676.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
gi|109706819|gb|ABG42996.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
Length = 306
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 86/150 (57%), Gaps = 13/150 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R +
Sbjct: 27 FGRIRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGIDRSADR 81
Query: 63 M---DRYSSYSSGG----SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
DR+ S GG G R++YR++V + S SWQDLKD+MR+AG+V ++
Sbjct: 82 YRRGDRHYERSGGGRSRYEYGPPTRTEYRLIVENVSSRISWQDLKDYMRQAGEVTYADAH 141
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ ++ DM+ AI KLD +E
Sbjct: 142 KQHRN-EGVVEFATHSDMRAAIEKLDGTEL 170
>gi|443724659|gb|ELU12563.1| hypothetical protein CAPTEDRAFT_175470 [Capitella teleta]
Length = 321
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 85/165 (51%), Gaps = 33/165 (20%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVD+ LK GY F+EF+DYRDA+DA+ +G G R+ +E A G R
Sbjct: 26 YGRIVDVLLK-----NGYGFVEFDDYRDADDAVYELNGKELCGERVVIEHARGPNRKDDR 80
Query: 63 ----------------------MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 100
MD+ SG G R++YR++V L S SWQDLK
Sbjct: 81 DGGYRDRGDRGGGRGGGRQPGWMDK-----SGSRYGPPARTEYRLVVENLSSRVSWQDLK 135
Query: 101 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
D+MR+AG+V ++ + GIV+++S DMK A+ KLD +E
Sbjct: 136 DYMRQAGEVTYADAHKQHKN-EGIVEFSSRADMKTALEKLDDTEI 179
>gi|346468607|gb|AEO34148.1| hypothetical protein [Amblyomma maculatum]
Length = 338
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 14/148 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I +I +K G+ F+EF+D+RDA+DA+ +G G R+ VELA G RR +
Sbjct: 26 FGRIREISIK-----NGFGFVEFDDHRDADDAVYELNGKELLGDRVSVELARGIRRGA-- 78
Query: 63 MDRYSSYSSGGS-----RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
D Y S ++ S G R++Y++ V L S SWQDLKD+MR+AG+V ++ R
Sbjct: 79 -DYYRSRAASRSPPRRRYGPPTRTEYQLTVENLSSRVSWQDLKDYMRQAGEVTYADAHRL 137
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R G+V++ +Y DMK A+ KLD ++
Sbjct: 138 RRN-EGVVEFATYSDMKNALEKLDNTDL 164
>gi|45120092|ref|NP_957161.1| serine/arginine-rich splicing factor 5a [Danio rerio]
gi|37681945|gb|AAQ97850.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
Length = 259
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 83/154 (53%), Gaps = 17/154 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK G+ F+EF+DYRDA+DA+ +G R+ +E A R
Sbjct: 27 YGRIREINLK-----NGFGFVEFDDYRDADDAVYELNGKELCSERVTIEHARSRRGRGGG 81
Query: 63 MDRYSSYS----------SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
+S SGGSR G R+++R++V L S SWQDLKD MR+ G+V F
Sbjct: 82 PGMGGRFSPRFGGYRQSRSGGSRYGPPVRTEHRIIVENLSSRISWQDLKDLMRKVGEVTF 141
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R + G+V++ S+ DMK AI KLD ++
Sbjct: 142 VDAHRTKKN-EGVVEFASHSDMKNAIEKLDGTDL 174
>gi|195144342|ref|XP_002013155.1| GL23543 [Drosophila persimilis]
gi|194102098|gb|EDW24141.1| GL23543 [Drosophila persimilis]
Length = 358
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 82/155 (52%), Gaps = 18/155 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S+
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSNR 81
Query: 63 MDRYSSY------------SSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
Y S G R++YR++V L S SWQDLKD+MR+AG+V
Sbjct: 82 DRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEVT 141
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ + R G+V++ S DMK AI KLD +E
Sbjct: 142 YADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 175
>gi|449296860|gb|EMC92879.1| hypothetical protein BAUCODRAFT_114866 [Baudoinia compniacensis
UAMH 10762]
Length = 326
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G F G RL V+ A GG R
Sbjct: 40 GEITEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSEFMGERLVVQFARGGNR---PR 91
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDR---G 119
D Y+ R RR+ +R+ +TGLP SWQDLKD R++G DV +S+V R+R G
Sbjct: 92 DGYNDAPRMAPR--PRRTVHRMTITGLPFETSWQDLKDFARQSGLDVVYSEVARERDASG 149
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYY 175
G G V+Y + D+ A+ KLD +F+ + R + + D R R SRSP Y
Sbjct: 150 GGKGFVEYETAQDLASAVEKLDNHDFKGSTVRC-ISDPQADIPRPRERFRSRSPGY 204
>gi|28571689|ref|NP_788665.1| B52, isoform A [Drosophila melanogaster]
gi|28571699|ref|NP_788666.1| B52, isoform C [Drosophila melanogaster]
gi|386765710|ref|NP_788667.2| B52, isoform N [Drosophila melanogaster]
gi|21064205|gb|AAM29332.1| AT29232p [Drosophila melanogaster]
gi|23171192|gb|AAF54969.2| B52, isoform A [Drosophila melanogaster]
gi|23171193|gb|AAN13575.1| B52, isoform C [Drosophila melanogaster]
gi|25012274|gb|AAN71250.1| LD30815p [Drosophila melanogaster]
gi|27820026|gb|AAO25044.1| GM10155p [Drosophila melanogaster]
gi|220950988|gb|ACL88037.1| B52-PA [synthetic construct]
gi|220957884|gb|ACL91485.1| B52-PA [synthetic construct]
gi|383292690|gb|AAN13576.2| B52, isoform N [Drosophila melanogaster]
Length = 350
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 82/156 (52%), Gaps = 19/156 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S+
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSNR 81
Query: 63 MDRYS-------------SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
+ S G R++YR++V L S SWQDLKD+MR+AG+V
Sbjct: 82 DRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEV 141
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ + R G+V++ S DMK AI KLD +E
Sbjct: 142 TYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 176
>gi|345315998|ref|XP_001512981.2| PREDICTED: hypothetical protein LOC100082305, partial
[Ornithorhynchus anatinus]
Length = 393
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 80/133 (60%), Gaps = 5/133 (3%)
Query: 17 PPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGG 73
P Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG
Sbjct: 23 PVWYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGR 82
Query: 74 SR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 132
+ G R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY D
Sbjct: 83 DKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR-KNEGVIEFVSYSD 141
Query: 133 MKYAIRKLDRSEF 145
MK A+ KLD +E
Sbjct: 142 MKRALEKLDGTEV 154
>gi|417410943|gb|JAA51935.1| Putative serine/arginine-rich splicing factor 4, partial [Desmodus
rotundus]
Length = 467
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR- 75
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 1 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKY 60
Query: 76 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 135
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK
Sbjct: 61 GPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKR 119
Query: 136 AIRKLDRSEF 145
A+ KLD +E
Sbjct: 120 ALEKLDGTEV 129
>gi|270015083|gb|EFA11531.1| hypothetical protein TcasGA2_TC016051 [Tribolium castaneum]
Length = 303
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 85/160 (53%), Gaps = 23/160 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR---- 58
YG I ++ +K G+AF+EF+DYRDA+DA+ +G G R+ VE A G R
Sbjct: 26 YGRIKEVAMK-----NGFAFVEFDDYRDADDAVYELNGKELLGERVSVERARGTPRGCDQ 80
Query: 59 -------------HSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRR 105
S +R S G R++YR++V L S SWQDLKD+MR+
Sbjct: 81 WRGSGGRGYGPPRGRSRDNREPDMRSHDRYGPPTRTEYRLIVENLSSRVSWQDLKDYMRQ 140
Query: 106 AGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
AG+V ++ + R G+V++ SY DMK AI KLD +E
Sbjct: 141 AGEVTYADAHKQRRN-EGVVEFASYSDMKNAIDKLDDTEL 179
>gi|378727012|gb|EHY53471.1| hypothetical protein HMPREF1120_01663 [Exophiala dermatitidis
NIH/UT8656]
Length = 316
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV- 77
G+ F+E+ED DA D + G F G RL V+ A G RR ++ R +
Sbjct: 43 GFGFIEYEDPMDARDVVPAFHGTEFKGERLTVQFARGPRRK-------DDFNGPSDRNIP 95
Query: 78 -SRRSDYRVLVTGLPSSASWQDLKDHMRRAG--DVCFSQVFRDRGGMTGIVDYTSYDDMK 134
RR+ YR+ +TGL SWQDLKD R +G DV +S+ R+R G G V++ + D+K
Sbjct: 96 RPRRTIYRMQITGLQPDTSWQDLKDFARNSGQLDVVYSETGRERDG-KGFVEFETQADLK 154
Query: 135 YAIRKLDRSEFRNAFSRSYVRVR-EYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSR 193
A+ KLD F+ A ++ E RSY + RSP R Y+ R P R
Sbjct: 155 TAVEKLDGQTFKGATVHCVADIQDERPDMRSYRQ---RSPPRGRYGPMDDYHDRRGPPQR 211
Query: 194 SWSYSPRSRSYSPRGK-YSRRSPSLSP 219
W SPRG Y RSP P
Sbjct: 212 GW---------SPRGSGYRERSPGRRP 229
>gi|198452967|ref|XP_001359013.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
gi|198132156|gb|EAL28156.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
Length = 357
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 82/155 (52%), Gaps = 18/155 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S+
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSNR 81
Query: 63 MDRYSSY------------SSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
Y S G R++YR++V L S SWQDLKD+MR+AG+V
Sbjct: 82 DRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEVT 141
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ + R G+V++ S DMK AI KLD +E
Sbjct: 142 YADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 175
>gi|194741292|ref|XP_001953123.1| GF17608 [Drosophila ananassae]
gi|190626182|gb|EDV41706.1| GF17608 [Drosophila ananassae]
Length = 350
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 82/155 (52%), Gaps = 18/155 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S+
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSNR 81
Query: 63 MDRYSSY------------SSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
Y S G R++YR++V L S SWQDLKD+MR+AG+V
Sbjct: 82 DRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEVT 141
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ + R G+V++ S DMK AI KLD +E
Sbjct: 142 YADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 175
>gi|119596372|gb|EAW75966.1| splicing factor, arginine/serine-rich 6, isoform CRA_c [Homo
sapiens]
Length = 383
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 17/151 (11%)
Query: 11 LKIPPR------PPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH----- 59
L PPR P Y F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 61 LTTPPRLSGPRTAPRYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYS 120
Query: 60 ----SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
S S +SG + G R++YR++V L S SWQDLKD MR+AG+V ++
Sbjct: 121 YGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADA 180
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 181 HKERTN-EGVIEFRSYSDMKRALDKLDGTEI 210
>gi|320168404|gb|EFW45303.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 239
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 81/140 (57%), Gaps = 13/140 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG D+ LK G+ F+EF+D RDA+DA+R G +F G RL VE A+ G R
Sbjct: 25 YGRTRDVTLK-----NGFGFVEFDDVRDADDAMRDLHGRDFMGDRLIVERANSGGRRDRG 79
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGM 121
R ++ R+ YRVLV L + SWQDLKD +R G +V F+ R+R G
Sbjct: 80 EPRERRFAP------PTRTQYRVLVENLSTRISWQDLKDFVRTCGVEVTFADAHRERDG- 132
Query: 122 TGIVDYTSYDDMKYAIRKLD 141
TG+V++ + DM++AIR+LD
Sbjct: 133 TGVVEFANSTDMRHAIRRLD 152
>gi|327280352|ref|XP_003224916.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 261
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 84/148 (56%), Gaps = 11/148 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVE----LAHGGRR 58
YG I +I+LK G+ F+EFED+RDA+DA+ +G R+ +E G R
Sbjct: 27 YGRIREINLK-----NGFGFVEFEDHRDADDAVYELNGKELCNERVTIEHARARRGGRGR 81
Query: 59 HSSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
+S Y SY G S+ G R+++R++V L S SWQDLKD MR+AG+V F R+
Sbjct: 82 YSQRFSYYQSYGGGSSQYGPPLRTEHRLIVENLSSRVSWQDLKDFMRKAGEVTFVDAHRN 141
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G+V++ S DMK A+ KLD SE
Sbjct: 142 NPN-EGVVEFASSSDMKSAMDKLDGSEL 168
>gi|221130960|ref|XP_002164119.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Hydra magnipapillata]
Length = 264
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 87/145 (60%), Gaps = 13/145 (8%)
Query: 6 IVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM-- 63
+ D+++K+ GYAF+EFED RDA+DA+ D F G R+ VE A G R +
Sbjct: 38 LKDVNIKL-----GYAFVEFEDKRDADDAVYELDRKEFFGSRITVEHATGTARGGDTRGE 92
Query: 64 -DR--YSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
DR YS G RG +++R++VT L S W DLKD+ R AG+V F++ ++R G
Sbjct: 93 RDRGGYSVRERG--RGRPYNTEWRLIVTNLSSRVGWMDLKDYFRSAGEVTFTKANKERVG 150
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEF 145
G+V++ SY +MK A++K D SEF
Sbjct: 151 -EGVVEFRSYREMKRALKKFDGSEF 174
>gi|403221223|dbj|BAM39356.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 334
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 76/147 (51%), Gaps = 18/147 (12%)
Query: 3 YGPIVDIDLKIPPRP--PGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGG--RR 58
+G I DID+K YAF++F R AEDA+ RDGY +D Y+LRVE A G R+
Sbjct: 36 FGEIKDIDIKHGKTTNYTSYAFIDFASVRSAEDAVDSRDGYEYDRYKLRVEFAGEGKPRK 95
Query: 59 HSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
H + + ++++ LP WQ LKDHMR+AG V + + +
Sbjct: 96 HDDDRRDRDRHRTDYR----------LVISNLPHGCRWQHLKDHMRKAGPVGYVNISHGK 145
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G VD+ DMKYA+RK+D SE
Sbjct: 146 ----GYVDFIHKSDMKYALRKMDGSEL 168
>gi|1403024|emb|CAA90876.1| hnRNP protein [Chironomus tentans]
Length = 322
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 83/157 (52%), Gaps = 20/157 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGGSH 81
Query: 62 --------SMDRYSSYSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGD 108
+ SR SR R++YR++V L S SWQDLKD+MR+AG+
Sbjct: 82 RDRYDDRYGRRGRYDRYNNSSRSNSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGE 141
Query: 109 VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
V ++ + + G+V++ + DMK AI KLD +E
Sbjct: 142 VTYADAHK-QNRNEGVVEFATLKDMKTAIEKLDDTEL 177
>gi|71895047|ref|NP_001026014.1| splicing factor, arginine/serine-rich 6 [Gallus gallus]
gi|53133810|emb|CAG32234.1| hypothetical protein RCJMB04_20j14 [Gallus gallus]
Length = 348
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 87/154 (56%), Gaps = 17/154 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH--- 59
YG ++++DLK GY F++FED RDA+DA+ +G + G R+ VE A G RR
Sbjct: 25 YGRLLEVDLK-----NGYGFVKFEDSRDADDAVYELNGKDLCGERVIVEHARGPRRDRDG 79
Query: 60 -------SSSMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
S SG + G R+++R++V L S SWQDLKD MR+AG+V +
Sbjct: 80 YSYSSRSGGGGGYSSRRQSGRDKYGPPVRTEHRLIVENLSSRCSWQDLKDFMRQAGEVTY 139
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ ++R G++++ SY DMK A+ KLD +E
Sbjct: 140 ADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 172
>gi|426222714|ref|XP_004005530.1| PREDICTED: uncharacterized protein LOC101109078 [Ovis aries]
Length = 437
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR- 75
Y F+EF+D RDA+DA+ +G + G R+ VE A G RR S S Y SG +
Sbjct: 23 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKY 82
Query: 76 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 135
G R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK
Sbjct: 83 GPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKR 141
Query: 136 AIRKLDRSEF 145
A+ KLD +E
Sbjct: 142 ALEKLDGTEV 151
>gi|432882989|ref|XP_004074178.1| PREDICTED: uncharacterized protein LOC101163182 isoform 2 [Oryzias
latipes]
Length = 384
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 90/159 (56%), Gaps = 22/159 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
YG I+++DLK GY F+EF+D RDA+DA+ +G G R+ VE G RR
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTKGPRRDGGY 79
Query: 62 -----SMDRYSSYSSG-------GSR---GVSRRSDYRVLVTGLPSSASWQDLKDHMRRA 106
++D+ SS SS G R G R+DYR++V L S SWQDLKD+MR+A
Sbjct: 80 GGGGRNLDQESSRSSKNGGYGRWGGRDRYGPPVRTDYRLIVENLSSRCSWQDLKDYMRQA 139
Query: 107 GDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G+V ++ + R G++++ Y DMK A+ KLD +E
Sbjct: 140 GEVTYADTHKGRRN-EGVIEFRQYSDMKRALEKLDGTEV 177
>gi|432864636|ref|XP_004070385.1| PREDICTED: uncharacterized protein LOC101162527 isoform 1 [Oryzias
latipes]
Length = 367
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 87/157 (55%), Gaps = 20/157 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG ++++D+K GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGKLLEVDMK-----NGYGFVEFEDNRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 63 MDRYSSYSSGGSR--------------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGD 108
SS+ G S G R++YR++V L S SWQDLKD MR+AG+
Sbjct: 80 YGGGSSWGGGRSNNSSSSRTRVGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGE 139
Query: 109 VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
V ++ ++R G++++ SY DMK A+ KLD ++
Sbjct: 140 VTYADAHKERTNQ-GVIEFRSYSDMKRALDKLDGTDI 175
>gi|195390405|ref|XP_002053859.1| GJ24113 [Drosophila virilis]
gi|194151945|gb|EDW67379.1| GJ24113 [Drosophila virilis]
Length = 347
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 82/155 (52%), Gaps = 18/155 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S+
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSNR 81
Query: 63 MDRYSSY------------SSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
Y S G R++YR++V L S SWQDLKD+MR+AG+V
Sbjct: 82 DRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEVT 141
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ + R G+V++ S DMK AI KLD +E
Sbjct: 142 YADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 175
>gi|289739639|gb|ADD18567.1| arginine/serine-rich 6 splicing factor [Glossina morsitans
morsitans]
Length = 346
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 84/160 (52%), Gaps = 23/160 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S+
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSNR 81
Query: 63 M-----------------DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRR 105
D+ + S G R++YR++V L S SWQDLKD+MR+
Sbjct: 82 DRYDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQ 141
Query: 106 AGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
AG+V ++ + R G+V++ S DMK AI KLD ++
Sbjct: 142 AGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTDL 180
>gi|47087341|ref|NP_998631.1| serine/arginine-rich splicing factor 6a [Danio rerio]
gi|32822789|gb|AAH55238.1| Splicing factor, arginine/serine-rich 6a [Danio rerio]
Length = 347
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 82/143 (57%), Gaps = 24/143 (16%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG ++++DLK GY F+EFED RDA+DA+ +G GY R + GR
Sbjct: 25 YGKLLEVDLK-----NGYGFVEFEDTRDADDAVYELNGKELCGYSSR---SRTGR----- 71
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
D+Y G R++YR++V L S SWQDLKD MR+AG+V ++ ++R
Sbjct: 72 -DKY---------GPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERAN-E 120
Query: 123 GIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DM+ A+ KLD ++
Sbjct: 121 GVIEFRSYSDMRRALEKLDGTDI 143
>gi|428182228|gb|EKX51089.1| hypothetical protein GUITHDRAFT_161608 [Guillardia theta CCMP2712]
Length = 258
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 81/154 (52%), Gaps = 25/154 (16%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I DI LK G+AF+E++ DAE A+R DG N +G R+ VE A
Sbjct: 28 FGKIRDISLK-----QGFAFVEYDHSEDAEYAVRKMDGVNLEGMRILVEFA--------- 73
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
G RG S YR+ L + SWQDLKD R+AG V ++ VF +RG
Sbjct: 74 ----KETPKRGPRGGS---GYRIYAENLSQNTSWQDLKDFARKAGKVIYTDVFSERGEKL 126
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 156
G+++Y + +DM+ A+ KLD +E RS VR+
Sbjct: 127 GVIEYATREDMEDALYKLDGTELH----RSKVRL 156
>gi|357621499|gb|EHJ73311.1| splicing factor arginine/serine-rich 6 [Danaus plexippus]
Length = 408
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 83/153 (54%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R +
Sbjct: 27 FGRIRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGIDRSADR 81
Query: 63 MDRYSSYSSGGSR----------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
R Y R G R++YR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 82 YRRDRYYERDRGRSRYDDYNYRYGPPTRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYA 141
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ ++ DM+ AI KLD +E
Sbjct: 142 DAHKQHRN-EGVVEFATHSDMRAAIEKLDGTEL 173
>gi|348688828|gb|EGZ28642.1| hypothetical protein PHYSODRAFT_353568 [Phytophthora sojae]
Length = 173
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 80/139 (57%), Gaps = 13/139 (9%)
Query: 17 PPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGG--- 73
PPG+AF++FED RDA+DAIR DG +F G R+RVELA GG R R G
Sbjct: 38 PPGFAFVDFEDPRDADDAIRSMDGRDFLGGRIRVELARGGSRRDGGGRRGDDDRGGYGGR 97
Query: 74 -------SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVD 126
R +R+DYRV VT LP W+++KD +R G+V + + D + I +
Sbjct: 98 GGDRFDRGRNPPQRTDYRVRVTDLPRDVDWRNVKDFLRTGGEVTYCNIEAD---GSAIAE 154
Query: 127 YTSYDDMKYAIRKLDRSEF 145
+ + DDM+ AI+KLD +EF
Sbjct: 155 FQTKDDMEDAIKKLDDTEF 173
>gi|289740685|gb|ADD19090.1| serine-arginine protein 55 [Glossina morsitans morsitans]
Length = 351
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 83/161 (51%), Gaps = 24/161 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSHR 81
Query: 63 M------------------DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMR 104
D+ + S G R++YR++V L S SWQDLKD+MR
Sbjct: 82 DRYGDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMR 141
Query: 105 RAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+AG+V ++ + R G+V++ S DMK AI KLD ++
Sbjct: 142 QAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTDL 181
>gi|193716028|ref|XP_001949124.1| PREDICTED: serine-arginine protein 55-like isoform 1 [Acyrthosiphon
pisum]
Length = 309
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 83/159 (52%), Gaps = 23/159 (14%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS-- 61
G + DI +K GYAF+EF+DYRDA+DA+ +G +G R+ VE A G R S
Sbjct: 29 GRVKDIAMK-----NGYAFVEFDDYRDADDAVYELNGRELNGERVSVERARGTPRGSDVW 83
Query: 62 ---------------SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRA 106
R + G R++YR++V L S SWQDLKD MR+A
Sbjct: 84 RGSGRGGDLPPPPPRRPRRDARDDRNDRYGPPTRTNYRLIVENLSSRVSWQDLKDFMRQA 143
Query: 107 GDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G+V ++ + R G+V++ SY D+K A+ KLD +E
Sbjct: 144 GEVTYADAHKQRKN-EGVVEFASYSDLKTALDKLDDTEL 181
>gi|347972223|ref|XP_315232.3| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|347972225|ref|XP_003436861.1| AGAP004592-PH [Anopheles gambiae str. PEST]
gi|333469344|gb|EAA10559.4| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|333469351|gb|EGK97262.1| AGAP004592-PH [Anopheles gambiae str. PEST]
Length = 345
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 83/153 (54%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R S
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGPSG 81
Query: 62 --------SMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
R Y SR G R++YR++V L + SWQDLKD+MR+AG+V ++
Sbjct: 82 YRERDRYDRDRRGGRYDKNSSRYGPPLRTEYRLVVENLSTRVSWQDLKDYMRQAGEVTYA 141
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ R G+V++ + DMK AI KLD +E
Sbjct: 142 DAHKQRKN-EGVVEFATLSDMKTAIEKLDDTEL 173
>gi|332858668|ref|XP_003317036.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 407
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 79/138 (57%), Gaps = 11/138 (7%)
Query: 18 PGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH---------SSSMDRYSS 68
P Y F+EFED RDA+DA+ +G G R+ VE A G RR S S
Sbjct: 98 PRYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSR 157
Query: 69 YSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDY 127
+SG + G R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++
Sbjct: 158 RTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEF 216
Query: 128 TSYDDMKYAIRKLDRSEF 145
SY DMK A+ KLD +E
Sbjct: 217 RSYSDMKRALDKLDGTEI 234
>gi|156379214|ref|XP_001631353.1| predicted protein [Nematostella vectensis]
gi|156218392|gb|EDO39290.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 81/150 (54%), Gaps = 13/150 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DI LK GY F+EF+D+RDAEDA+ +G + G R+ VE + G R
Sbjct: 25 YGKIRDISLK-----RGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEFSKGRRSEGGG 79
Query: 63 MDR--YSSYSSGGSR-----GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
DR +S G R++Y V+V L S SWQDLKD+ R+ G V ++
Sbjct: 80 RDRRDFSGRGGRDGGRRPIYGPPVRTNYSVIVENLSSRTSWQDLKDYFRKYGKVTYADAH 139
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ R G G+V++ S DD+ AI KLD +E
Sbjct: 140 KKRIG-EGVVEFESKDDLNTAIEKLDDTEL 168
>gi|443710288|gb|ELU04543.1| hypothetical protein CAPTEDRAFT_220292 [Capitella teleta]
Length = 291
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 25/162 (15%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGG------ 56
YG + DI LK GY F+EFEDYRDA+DA+ +G + G R+ VE A G
Sbjct: 26 YGRVTDILLK-----NGYGFVEFEDYRDADDAVYELNGKDLMGDRVLVEHAKGTPRGEGR 80
Query: 57 -------RRHSSSMDRYSSY-----SSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHM 103
DRY+SY S+ SR G R+ YR++V L S SWQDLKD+M
Sbjct: 81 SSSGGRGSDRGGGGDRYNSYAPPRRSARDSRYGPPVRTQYRLVVENLSSRVSWQDLKDYM 140
Query: 104 RRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R+AG+V ++ + + GIV++ + DM AIRKL+++E
Sbjct: 141 RQAGEVTYADAHKSKRN-EGIVEFATRSDMDNAIRKLNKTEI 181
>gi|432882993|ref|XP_004074180.1| PREDICTED: uncharacterized protein LOC101163182 isoform 4 [Oryzias
latipes]
Length = 344
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 26/143 (18%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ Y+ +G L GGR
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDPRDADDAV-----YDLNGKELCGYGRWGGR----- 69
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
DRY G R+DYR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 70 -DRY---------GPPVRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRRN-E 118
Query: 123 GIVDYTSYDDMKYAIRKLDRSEF 145
G++++ Y DMK A+ KLD +E
Sbjct: 119 GVIEFRQYSDMKRALEKLDGTEV 141
>gi|426241491|ref|XP_004014624.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Ovis
aries]
Length = 344
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 17/153 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS-- 60
YG +++IDLK GY F+EFED RDA+DA+ + G R+ VE A G
Sbjct: 25 YGRLLEIDLK-----NGYGFVEFEDSRDADDAVYEPNA-KLCGERVIVEHARGPXXXXXX 78
Query: 61 -SSMDR-----YSSYSSGG--SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
SS D+ YSS + G G R+++R++V L S SWQDLKD MR+AG+V ++
Sbjct: 79 FSSHDKGGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYA 138
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++R G++++ SY DMK A+ KLD +E
Sbjct: 139 DAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 170
>gi|426241493|ref|XP_004014625.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2 [Ovis
aries]
Length = 339
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG +++IDLK GY F+EFED RDA+DA+ + G R+ VE A G R S
Sbjct: 25 YGRLLEIDLK-----NGYGFVEFEDSRDADDAVYEPNA-KLCGERVIVEHARGPSREGSY 78
Query: 63 MDRYSSY----SSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
Y +SG + G R+++R++V L S SWQDLKD MR+AG+V ++ ++
Sbjct: 79 SSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKE 138
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R G++++ SY DMK A+ KLD +E
Sbjct: 139 RTN-EGVIEFRSYSDMKRALDKLDGTEI 165
>gi|390352204|ref|XP_003727843.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Strongylocentrotus purpuratus]
Length = 302
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 81/161 (50%), Gaps = 24/161 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR---- 58
+G I +I+LK G+ F+EFEDYRDA+DA+ +G G R+ +E A G R
Sbjct: 27 FGRIREINLK-----NGFGFVEFEDYRDADDAVYELNGKELVGERVIIEHARGPARGRDE 81
Query: 59 --------------HSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMR 104
S G R+++R++V L S SWQDLKD+MR
Sbjct: 82 YRFGGEGGGGGGGRGRDGGGGGGGSRSSQRYGPPVRTEFRIVVENLSSRVSWQDLKDYMR 141
Query: 105 RAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+AG+V F+ + GIV++ +Y DMK A+ KLD +E
Sbjct: 142 QAGEVTFADAHKQHKN-EGIVEFATYSDMKNAVEKLDGTEI 181
>gi|328714675|ref|XP_003245425.1| PREDICTED: serine-arginine protein 55-like isoform 2 [Acyrthosiphon
pisum]
Length = 309
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 23/160 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
+G I +I LK GY F+EF+DYRDA+DA+ +G +G R+ VE A G R S
Sbjct: 28 FGRIKEILLK-----NGYGFIEFDDYRDADDAVYELNGRELNGERVSVERARGTPRGSDV 82
Query: 62 ----------------SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRR 105
R + G R++YR++V L S SWQDLKD MR+
Sbjct: 83 WRGSGRGGDLPPPPPRRPRRDARDDRNDRYGPPTRTNYRLIVENLSSRVSWQDLKDFMRQ 142
Query: 106 AGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
AG+V ++ + R G+V++ SY D+K A+ KLD +E
Sbjct: 143 AGEVTYADAHKQRKN-EGVVEFASYSDLKTALDKLDDTEL 181
>gi|325087601|gb|EGC40911.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 316
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 109/220 (49%), Gaps = 35/220 (15%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E+ED DA+D + G +F G RL V+ A G R +
Sbjct: 48 GKITEIKLMS-----GFGFIEYEDAMDAKDVVPAFHGTDFKGERLTVQFARGPRHKET-- 100
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+S S S RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ D
Sbjct: 101 --FSGPSDRSSAPRPRRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSETGHD---GR 154
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR- 181
G V++ + D+K A+ KLD EF+ + ++ + R+ R PY SRS R
Sbjct: 155 GFVEFETGSDLKTAVEKLDGREFKGSRVLCTQDIQSQEDRQ------PRDPYRSRSPGRR 208
Query: 182 ---SPY--YSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPS 216
PY Y R R P RS YSPR Y RSP+
Sbjct: 209 GGYHPYDDYDR-RGPPRS--------GYSPRNHYRERSPA 239
>gi|302690366|ref|XP_003034862.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
gi|300108558|gb|EFI99959.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
Length = 292
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 78/146 (53%), Gaps = 14/146 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG +VD + G+ F+E+E +DAEDA+ +G F+G + VE A R
Sbjct: 32 YGTVVDCRVMT-----GFGFIEYESSKDAEDAVNEMNGKTFNGNSIAVEFARENRPRREP 86
Query: 63 MDRYSSYSSGGSRGVSRR--SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+R Y G RR +RVLVTG+ SWQDLKD R AG V F+ + RD G
Sbjct: 87 YERDREY------GAPRRRPGGFRVLVTGVSRDTSWQDLKDFGREAGSVTFADIDRDVPG 140
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
G+++Y S DD +A+R LDR + R
Sbjct: 141 Q-GVLEYMSRDDADHAVRYLDRRDLR 165
>gi|170045194|ref|XP_001850202.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
gi|167868189|gb|EDS31572.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
Length = 370
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 82/159 (51%), Gaps = 22/159 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG------G 56
YG DI +K GY F+EFEDYRDA+DA+ +G G R+ VE A G G
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGPGG 81
Query: 57 RRHSSSMDRYSSYS---------SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRA 106
RR SR G R++YR++V L S SWQDLKD+MR+A
Sbjct: 82 RREYDRGGDRYGDRGRGGGGRYDKNSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQA 141
Query: 107 GDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G+V ++ + R G+V++ + DMK AI KLD +E
Sbjct: 142 GEVTYADAHKQRKN-EGVVEFATSSDMKTAIEKLDDTEL 179
>gi|410916817|ref|XP_003971883.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Takifugu
rubripes]
Length = 310
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EF+D RDAEDA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----KGFGFVEFDDPRDAEDAVYELDGKELCNERVTIEHARVRLRGGRG 81
Query: 63 M--------DRYS--SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
DRY S SS R++ R++V L S SWQDLKD MR+AG+V F+
Sbjct: 82 RRPGGGRFSDRYGRGSQSSRSRNPPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFA 141
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R + G+V++ SY D+K A+ KL E
Sbjct: 142 DAHRPKLN-EGVVEFASYSDLKNALEKLSGKEM 173
>gi|432864638|ref|XP_004070386.1| PREDICTED: uncharacterized protein LOC101162527 isoform 2 [Oryzias
latipes]
Length = 373
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 87/163 (53%), Gaps = 26/163 (15%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG ++++D+K GY F+EFED RDA+DA+ +G G R+ VE A G RR
Sbjct: 25 YGKLLEVDMK-----NGYGFVEFEDNRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 63 MDRYSSYSSGGSR--------------------GVSRRSDYRVLVTGLPSSASWQDLKDH 102
SS+ G S G R++YR++V L S SWQDLKD
Sbjct: 80 YGGGSSWGGGRSSGYSSSSNSSSSRTRVGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDF 139
Query: 103 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
MR+AG+V ++ ++R G++++ SY DMK A+ KLD ++
Sbjct: 140 MRQAGEVTYADAHKERTNQ-GVIEFRSYSDMKRALDKLDGTDI 181
>gi|156356000|ref|XP_001623720.1| predicted protein [Nematostella vectensis]
gi|156210446|gb|EDO31620.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 11/173 (6%)
Query: 2 MYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
++G + ++D K GYA++ F++ +DA+ A+ + F G ++ +E A R
Sbjct: 25 VFGKVREVDFK-----EGYAYVVFKENKDADRAVAALNNSEFHGAKILMEKAKEMRNGVG 79
Query: 62 SMDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
Y++ + G RS++RV+V L + A W +LK+ M AG+VC++ R R G
Sbjct: 80 GYTAAGGYTARTRQMGPPVRSEFRVIVENLSTRAKWLELKEFMNNAGEVCYADTHRRRPG 139
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSP 173
G+V++T+ +DMK AI LD+ EF +R+R+ R S+S SRSP
Sbjct: 140 -EGVVEFTTEEDMKRAIASLDKCEFYG----KRIRLRQELPRSGTSKSRSRSP 187
>gi|403166701|ref|XP_003326577.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166678|gb|EFP82158.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 258
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 16/144 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG ++D+ + G+ FLE++ RDAEDA+ +G +F G RL VE A R
Sbjct: 29 YGTLMDVRIM-----AGFGFLEYDSVRDAEDAVHDLNGRDFMGERLIVEFAKAPRGRD-- 81
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
SGG RR +R+LV GL SWQDLKD R+AG+V + V R+ G
Sbjct: 82 ------IHSGGHG--PRRGGFRLLVKGLSHETSWQDLKDFARQAGNVTRADVDRNMPG-E 132
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
G++++ S DD AIRKLD +E +
Sbjct: 133 GLIEFASQDDADNAIRKLDGTELK 156
>gi|363742346|ref|XP_417747.3| PREDICTED: serine/arginine-rich splicing factor 4 [Gallus gallus]
Length = 214
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 77/129 (59%), Gaps = 13/129 (10%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS---SSMDRYSSYSSGGSRG 76
Y F+EF+D RDA+DA+ +G + G R+ VE A G R + S D+Y G
Sbjct: 4 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRGYGYRRSGRDKY---------G 54
Query: 77 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 136
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A
Sbjct: 55 PPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFKSYSDMKRA 113
Query: 137 IRKLDRSEF 145
+ KLD +E
Sbjct: 114 LEKLDGTEV 122
>gi|213401865|ref|XP_002171705.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
gi|211999752|gb|EEB05412.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
Length = 375
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 15/140 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+D L G+ FLE E+ RDA D + DG F G R+ VE A G RR
Sbjct: 27 YGRILDCKLMN-----GFGFLELENPRDARDIVN--DGKEFMGERIIVEPARGERR---- 75
Query: 63 MDRYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
R ++ G ++ RR+ YR++V L SWQDLKD MR+AG+ F+ R++ G
Sbjct: 76 --RRDTFRDGAAKYPRPRRTGYRLIVENLAEDVSWQDLKDVMRKAGEPTFTDAHREQRG- 132
Query: 122 TGIVDYTSYDDMKYAIRKLD 141
TG+V++++ DDMK+A+ L+
Sbjct: 133 TGVVEFSTEDDMKHALDTLN 152
>gi|453083473|gb|EMF11519.1| hypothetical protein SEPMUDRAFT_150428 [Mycosphaerella populorum
SO2202]
Length = 359
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G F G RL V+ A G R
Sbjct: 61 GEITEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSEFMGERLVVQFARGSTRPREGF 115
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDR---G 119
+ + RR+ +R+ +TGLP SWQDLKD R++G DV +S+V R+R G
Sbjct: 116 EHQPRMAP-----RPRRTVHRMTITGLPFETSWQDLKDFARQSGLDVVYSEVNRERDPAG 170
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 152
G V+Y + D+ A+ KLD SEF+ A R
Sbjct: 171 TGKGFVEYETAADLASAVEKLDNSEFKGATVRC 203
>gi|355778262|gb|EHH63298.1| Adapter-related protein complex 3 subunit beta-2 [Macaca
fascicularis]
Length = 1156
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 79/154 (51%), Gaps = 47/154 (30%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL--AHGGRRHSSSMDRYSSYSSGGSRGV 77
+AF+ FED RDAEDAI GR+GY++ RLRVE +GGR
Sbjct: 46 FAFVHFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGR-------------------- 85
Query: 78 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 137
SWQDLKDHMR DVC++ V +D GM V+Y DM+YA+
Sbjct: 86 ----------------GSWQDLKDHMRAVWDVCYAHVQKDGVGM---VEYLRKADMEYAL 126
Query: 138 RKLDRSEFRNAFSR-SYVRVREYDSRRS---YSR 167
RKLD +F + S SY+RV Y RR+ YSR
Sbjct: 127 RKLDDIKFCSHDSETSYIRV--YPERRTSYGYSR 158
>gi|432882987|ref|XP_004074177.1| PREDICTED: uncharacterized protein LOC101163182 isoform 1 [Oryzias
latipes]
Length = 372
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G G R+ VE G RR
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTKGPRRDGGY 79
Query: 63 MDRYSSYSSGGSR----GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S G R+DYR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GGGGRSGYGRWGGRDRYGPPVRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ Y DMK A+ KLD +E
Sbjct: 140 RN-EGVIEFRQYSDMKRALEKLDGTEV 165
>gi|148238297|ref|NP_001085381.1| serine/arginine-rich splicing factor 4 [Xenopus laevis]
gi|49257226|gb|AAH71160.1| MGC83263 protein [Xenopus laevis]
Length = 259
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 86/155 (55%), Gaps = 18/155 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK G+ F+EF+D+RDA+DA+ +G R+ +ELA R
Sbjct: 27 YGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGKVLCNERVTIELARNRRGRGGM 81
Query: 63 M--------DRYS---SYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
M +R++ S S G SR G R+++R++V L S SWQDLKD MR+AG+V
Sbjct: 82 MGGGGGRYPNRFAYRQSNSGGPSRYGPPVRTEHRIIVENLSSRVSWQDLKDFMRKAGEVT 141
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ R G+V++ SY DMK A+ KLD E
Sbjct: 142 YVDAHRSNRN-EGVVEFASYSDMKSALDKLDGVEL 175
>gi|121705498|ref|XP_001271012.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
gi|119399158|gb|EAW09586.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
Length = 296
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 114/228 (50%), Gaps = 39/228 (17%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS-- 61
G I +I L G+ F+E+ED DA D + DG +F G RL V+ A G RR +
Sbjct: 33 GKITEIKLMN-----GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFARGPRRKENFP 85
Query: 62 -SMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRG 119
MDR + RR+ +R+L++GLP + SWQDLKD R++G DV +S+ R+ G
Sbjct: 86 GPMDR-------PNMPRPRRTVFRMLISGLPET-SWQDLKDFARQSGLDVVYSETGREPG 137
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRS----YSRSPSRS--P 173
G V++ + D+K A+ KLD +F+ + ++ +D R SRSP RS P
Sbjct: 138 --RGFVEFETAADLKTAVDKLDGRDFKGSRVSCIADIQSHDDRALRDPYRSRSPRRSYPP 195
Query: 174 Y------YSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSP 215
+ R SP + R RSP P R Y R Y RRSP
Sbjct: 196 MEEYDRRFPAPRGYSPRHYRERSP------VPVRREYYERDGYGRRSP 237
>gi|239606902|gb|EEQ83889.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis ER-3]
gi|327351368|gb|EGE80225.1| RNA recognition domain-containing protein containing protein
[Ajellomyces dermatitidis ATCC 18188]
Length = 299
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 111/226 (49%), Gaps = 35/226 (15%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E+ED DA+D + DG +F G RL V+ A G R +
Sbjct: 34 GKITEIKLMS-----GFGFIEYEDAMDAKDVVP--DGTDFKGERLTVQFARGPRHKET-- 84
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+S S S RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ D
Sbjct: 85 --FSGPSDRSSAPRPRRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSETGHD---GR 138
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR- 181
G V++ + D+K A+ KLD EF+ + ++ + R+ SR PY SRS R
Sbjct: 139 GFVEFETGSDLKTAVEKLDGREFKGSRVLCTQDIQSLEDRQ------SRDPYRSRSPGRR 192
Query: 182 ---SPYYSRSRSPSRSWSYSPRS---------RSYSPRGKYSRRSP 215
PY R + YSPR+ R Y R Y RR+P
Sbjct: 193 GGYHPYDDYDRRGAPRGGYSPRNHYRERSPGRRDYYDRDGYGRRTP 238
>gi|226288775|gb|EEH44287.1| hypothetical protein PADG_00576 [Paracoccidioides brasiliensis
Pb18]
Length = 303
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 106/223 (47%), Gaps = 43/223 (19%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E+ED DA+D + DG +F G RL V+ A G R +
Sbjct: 34 GKITEIKLMS-----GFGFIEYEDAMDAKDVVP--DGTDFKGERLTVQFARGPRHKET-- 84
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+S S RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ D
Sbjct: 85 --FSGPPDRSSAPRPRRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSETGHD---GR 138
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G V++ + D+K A+ KLD EF+ + ++ + R+ R PY
Sbjct: 139 GFVEFETGSDLKTAVEKLDGREFKGSRVLCTQDIQSQEDRQ------PREPY-------- 184
Query: 183 PYYSRSRSPSRSWSYSPRS---------RSYSPRGKYSRRSPS 216
RSRSP R Y P R YSPR Y RSP+
Sbjct: 185 ----RSRSPGRRGGYHPYEEYDRRGAPPRGYSPRNHYRERSPA 223
>gi|432882991|ref|XP_004074179.1| PREDICTED: uncharacterized protein LOC101163182 isoform 3 [Oryzias
latipes]
Length = 388
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G G R+ VE G RR
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTKGPRRDGGY 79
Query: 63 MDRYSSYSSGGSR----GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S G R+DYR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GGGGRSGYGRWGGRDRYGPPVRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGR 139
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ Y DMK A+ KLD +E
Sbjct: 140 RN-EGVIEFRQYSDMKRALEKLDGTEV 165
>gi|225556594|gb|EEH04882.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 314
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 110/220 (50%), Gaps = 37/220 (16%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E+ED DA+D + DG +F G RL V+ A G R +
Sbjct: 48 GKITEIKLMS-----GFGFIEYEDAMDAKDVVP--DGTDFKGERLTVQFARGPRHKET-- 98
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+S S S RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ D
Sbjct: 99 --FSGPSDRSSAPRPRRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSETGHD---GR 152
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR- 181
G V++ + D+K A+ KLD EF+ + ++ + R+ R PY SRS R
Sbjct: 153 GFVEFETGSDLKTAVEKLDGREFKGSRVLCTQDIQSQEDRQ------PRDPYRSRSPGRR 206
Query: 182 ---SPY--YSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPS 216
PY Y R R P RS YSPR Y RSP+
Sbjct: 207 GGYHPYDDYDR-RGPPRS--------GYSPRNHYRERSPA 237
>gi|154284490|ref|XP_001543040.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150406681|gb|EDN02222.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 300
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 110/220 (50%), Gaps = 37/220 (16%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E+ED DA+D + DG +F G RL V+ A G R +
Sbjct: 34 GKITEIKLMS-----GFGFIEYEDAMDAKDVVP--DGTDFKGERLTVQFARGPRHKET-- 84
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+S S S RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ D
Sbjct: 85 --FSGPSDRSSAPRPRRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSEAGHD---GR 138
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR- 181
G V++ + D+K A+ KLD EF+ + ++ + R+ R PY SRS R
Sbjct: 139 GFVEFETGSDLKTAVEKLDGREFKGSRVLCTQDIQSQEDRQ------PRDPYRSRSPGRR 192
Query: 182 ---SPY--YSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPS 216
PY Y R R P RS YSPR Y RSP+
Sbjct: 193 GGYHPYDDYDR-RGPPRS--------GYSPRNHYRERSPA 223
>gi|345491212|ref|XP_001603815.2| PREDICTED: serine-arginine protein 55-like isoform 2 [Nasonia
vitripennis]
Length = 364
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 38/175 (21%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS-- 60
YG I ++ +K G+AF+EF+DYRDA+DA+ +G G R+ VE A G R S
Sbjct: 26 YGRIKEVAMK-----NGFAFVEFDDYRDADDAVYELNGKELLGERITVERARGTPRGSDQ 80
Query: 61 -------------------------SSMDRYSSYSSGGSRGVSR-----RSDYRVLVTGL 90
S++R + +S + + R R++YR+ V L
Sbjct: 81 WRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTTSSYKQSLPRYGPPTRTEYRLTVENL 140
Query: 91 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
S SWQDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI KLD +E
Sbjct: 141 SSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIEKLDDTEL 194
>gi|348519443|ref|XP_003447240.1| PREDICTED: hypothetical protein LOC100690923 isoform 1 [Oreochromis
niloticus]
Length = 390
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G G R+ VE G RR
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTRGPRRDGGY 79
Query: 63 MDRYSSYSSGGSR---GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
Y G R G R+DYR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 GGGGGGYGRWGGRDRYGPPIRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRK 139
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEF 145
G++++ Y DMK A+ KLD +E
Sbjct: 140 N-EGVIEFRLYSDMKRALEKLDGTEV 164
>gi|52345470|ref|NP_001004783.1| serine/arginine-rich splicing factor 5 [Xenopus (Silurana)
tropicalis]
gi|49522053|gb|AAH74518.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
gi|89273344|emb|CAJ81460.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 272
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 80/151 (52%), Gaps = 14/151 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EF+D RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFDDPRDADDAVYELDGKELCNERVTIEHARLRSRGGPR 81
Query: 63 M-------DRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
DR+SS G R R++ R++V L S SWQDLKD MR+AG+V F+
Sbjct: 82 GLGRGRYNDRFSSRRPRGDRSAPPIRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADA 141
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R + G+V++ SY D+K AI KL E
Sbjct: 142 HRPKLN-EGVVEFASYSDLKNAIEKLSGKEI 171
>gi|302894677|ref|XP_003046219.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
gi|256727146|gb|EEU40506.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
Length = 329
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 17/153 (11%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I ++ L G+ F+E++D DA+D + DG NF G RL V+ AHG R
Sbjct: 34 GEITEVKLM-----NGFGFIEYKDPMDAQDVVP--DGSNFMGERLTVQFAHGPRHREGG- 85
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ ++ R RR+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD G
Sbjct: 86 --FGNHERAAPR--PRRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGR- 140
Query: 123 GIVDYTSYDDMKYAIRKLDRSEF---RNAFSRS 152
G V++ + D++ A+ KLD EF RN +RS
Sbjct: 141 GFVEFETAADLRTAVEKLDGREFKGQRNMLTRS 173
>gi|336465804|gb|EGO53969.1| hypothetical protein NEUTE1DRAFT_118022 [Neurospora tetrasperma
FGSC 2508]
gi|350287365|gb|EGZ68612.1| hypothetical protein NEUTE2DRAFT_146011 [Neurospora tetrasperma
FGSC 2509]
Length = 315
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 110/216 (50%), Gaps = 21/216 (9%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G +F G RL V+ A G R H
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSDFMGERLTVQFARGAR-HREGG 86
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
++ + R RR+ +R+ ++GLP+ SWQDLKD R++G DV +S+ R++ G
Sbjct: 87 PGFTHERNSQPR--PRRTPHRMQISGLPNETSWQDLKDFARQSGLDVVYSETTRNQNG-E 143
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G V++ + D++ A+ KLD EF+ + V + D R+ R+ SRSP R R
Sbjct: 144 GFVEFENAADLRTAVEKLDNREFKGQRV-TCVANTQPDIPRNDHRARSRSP---RGRPYP 199
Query: 183 PY---YSRSRSPSRSWSYSPRSRSYSPRGKYSRRSP 215
P Y R P R YSPR Y R Y RSP
Sbjct: 200 PPMDDYDRRGPPPR--GYSPRRDGY--RDGYRDRSP 231
>gi|159163527|pdb|1X4C|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor 2
Length = 108
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 4/75 (5%)
Query: 84 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 143
RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD +
Sbjct: 17 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNT 73
Query: 144 EFR-NAFSRSYVRVR 157
+FR + +Y+RV+
Sbjct: 74 KFRSHEGETAYIRVK 88
>gi|390352206|ref|XP_798746.2| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Strongylocentrotus purpuratus]
Length = 349
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 85/170 (50%), Gaps = 33/170 (19%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I +I+LK G+ F+EFEDYRDA+DA+ +G G R+ +E A G R
Sbjct: 65 FGRIREINLK-----NGFGFVEFEDYRDADDAVYELNGKELVGERVIIEHARGPARGRDE 119
Query: 63 M--------DRYSSYSSGGSR-------------------GVSRRSDYRVLVTGLPSSAS 95
D++ GG G R+++R++V L S S
Sbjct: 120 YRYGYRRRGDKFGGEGGGGGGGRGRDGGGGGGGSRSSQRYGPPVRTEFRIVVENLSSRVS 179
Query: 96 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
WQDLKD+MR+AG+V F+ + GIV++ +Y DMK A+ KLD +E
Sbjct: 180 WQDLKDYMRQAGEVTFADAHKQHKN-EGIVEFATYSDMKNAVEKLDGTEI 228
>gi|336266018|ref|XP_003347779.1| hypothetical protein SMAC_03877 [Sordaria macrospora k-hell]
gi|380091314|emb|CCC11171.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 315
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 110/216 (50%), Gaps = 21/216 (9%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G +F G RL V+ A G R H
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSDFMGERLTVQFARGAR-HREGG 86
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
++ + R RR+ +R+ ++GLP+ SWQDLKD R++G DV +S+ R++ G
Sbjct: 87 PGFTHERNSQPR--PRRTPHRMQISGLPNETSWQDLKDFARQSGLDVVYSETTRNQNG-E 143
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G V++ + D++ A+ KLD EF+ + V + D R+ R+ SRSP R R
Sbjct: 144 GFVEFENAADLRTAVEKLDNREFKGQRV-TCVANTQPDIPRNDHRARSRSP---RGRPYP 199
Query: 183 PY---YSRSRSPSRSWSYSPRSRSYSPRGKYSRRSP 215
P Y R P R YSPR Y R Y RSP
Sbjct: 200 PPVDDYDRRGPPPR--GYSPRRDGY--RDGYRDRSP 231
>gi|348517719|ref|XP_003446380.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Oreochromis
niloticus]
Length = 293
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 126/249 (50%), Gaps = 30/249 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRL---RVELAHGGRRH 59
YG I DIDLK G+ F+EF+D RDAEDA+ Y DG L RV + H R
Sbjct: 27 YGRIRDIDLKR-----GFGFVEFDDPRDAEDAV-----YELDGKELCNERVTIEHARVRL 76
Query: 60 SSSM------------DRYS--SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRR 105
DRY S +S R++ R++V L S SWQDLKD MR+
Sbjct: 77 RGGRGRGGGGGGGRFSDRYGRGSQNSRSRNPPPMRTENRLIVENLSSRVSWQDLKDFMRQ 136
Query: 106 AGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSY 165
AG+V F+ R + G+V++ S+ D+K A+ KL E + ++ RS
Sbjct: 137 AGEVTFADAHRPKLN-EGVVEFASHSDLKNALDKLSGKEINGRKIKLIEAAKKRSRSRSR 195
Query: 166 SRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSR-RSPSLSPARSAS 224
S S SRS SR RS S RSRSP+++ + S RSRS SP G S S S PA+ +S
Sbjct: 196 SESSSRSRSRSRGRSASRSPRRSRSPAKAHNRS-RSRSGSPAGGASSPTSKSKEPAKRSS 254
Query: 225 QRSPSGSPP 233
+ S S +PP
Sbjct: 255 KMSKSATPP 263
>gi|225718298|gb|ACO14995.1| Splicing factor, arginine/serine-rich 4 [Caligus clemensi]
Length = 234
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA------HGG 56
YG + +I LK GY F+EFED+RDA+DA++ DG + +G R+RVE A GG
Sbjct: 29 YGKLREIALK-----NGYGFVEFEDHRDADDAVQDLDGKDMNGSRVRVEFARSPRDKRGG 83
Query: 57 RRHSSSMDRYSSYSSGGSRGVS-----RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
R+ S+ R S + RR+ YR+ V L S ASWQDLKD+ R GD+ +
Sbjct: 84 SRYPSTSSRRSPPRGRRGAPIKRNPPGRRTQYRIRVENLSSRASWQDLKDYFRSCGDITY 143
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ + R G+V++ M+ A+ +LD +E
Sbjct: 144 TNAHKPRNN-EGVVEFGDKRAMENALDRLDDTEL 176
>gi|348519445|ref|XP_003447241.1| PREDICTED: hypothetical protein LOC100690923 isoform 2 [Oreochromis
niloticus]
Length = 386
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G G R+ VE G RR
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTRGPRRDGGY 79
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
G R+DYR++V L S SWQDLKD+MR+AG+V ++ + R
Sbjct: 80 G-GGGGGGGRDRYGPPIRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKN-E 137
Query: 123 GIVDYTSYDDMKYAIRKLDRSEF 145
G++++ Y DMK A+ KLD +E
Sbjct: 138 GVIEFRLYSDMKRALEKLDGTEV 160
>gi|346326093|gb|EGX95689.1| Nucleotide-binding, alpha-beta plait [Cordyceps militaris CM01]
Length = 332
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 20/149 (13%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I ++ L G+ F+E++D DA D + DG +F G RL V+ A G R
Sbjct: 34 GEITEVKLMH-----GFGFIEYKDPMDARDVVP--DGSDFKGTRLTVQFARGPRPREPP- 85
Query: 64 DRYSSYSSGGSRGV-----SRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRD 117
Y +GG+ RR+ +R+ +TGLP+ SWQDLKD R+AG DV +S+ RD
Sbjct: 86 ----GYGAGGAHHERAAPRPRRTIHRMTITGLPNETSWQDLKDFARQAGPDVVYSETARD 141
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEFR 146
G G V+Y + +D++ A+ KLD EF+
Sbjct: 142 SG--RGFVEYENANDLRTAVEKLDGFEFK 168
>gi|261194216|ref|XP_002623513.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis SLH14081]
gi|239588527|gb|EEQ71170.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis SLH14081]
Length = 258
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 106/211 (50%), Gaps = 30/211 (14%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 78
G+ F+E+ED DA+D + DG +F G RL V+ A G R + +S S S
Sbjct: 3 GFGFIEYEDAMDAKDVVP--DGTDFKGERLTVQFARGPRHKET----FSGPSDRSSAPRP 56
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 137
RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ D G V++ + D+K A+
Sbjct: 57 RRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSETGHD---GRGFVEFETGSDLKTAV 112
Query: 138 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR----SPYYSRSRSPSR 193
KLD EF+ + ++ + R+ SR PY SRS R PY R +
Sbjct: 113 EKLDGREFKGSRVLCTQDIQSLEDRQ------SRDPYRSRSPGRRGGYHPYDDYDRRGAP 166
Query: 194 SWSYSPRS---------RSYSPRGKYSRRSP 215
YSPR+ R Y R Y RR+P
Sbjct: 167 RGGYSPRNHYRERSPGRRDYYDRDGYGRRTP 197
>gi|322792693|gb|EFZ16561.1| hypothetical protein SINV_05882 [Solenopsis invicta]
Length = 386
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG D+ +K GY F+EF+DYRDA+DA+ Y +G L E R S
Sbjct: 80 YGRFRDVLIK-----NGYGFVEFDDYRDADDAV-----YELNGKELLGESRDDMRHDRDS 129
Query: 63 MDRYSSYSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
++R + +S + + R R++YR+ V L S SWQDLKD+MR+AG+V ++ +
Sbjct: 130 VNRNTRTASSYKQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQ 189
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R G+V++ +Y D+K AI KLD +E
Sbjct: 190 RRN-EGVVEFATYSDLKNAIDKLDDTEL 216
>gi|452839557|gb|EME41496.1| hypothetical protein DOTSEDRAFT_73793 [Dothistroma septosporum
NZE10]
Length = 327
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 80/153 (52%), Gaps = 14/153 (9%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I++I L G+ F+E++D DA D + G F G RL V+ A G R
Sbjct: 35 GEIMEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSEFMGERLVVQFARGSNRPREGF 89
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDR---G 119
+ + RR+ +R+ +TGLP SWQDLKD R++G DV +S+V R+R G
Sbjct: 90 EHQPRMAP-----RPRRTVHRMTITGLPFETSWQDLKDFARQSGLDVVYSEVNRERDPSG 144
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 152
G V+Y + D+ A+ KLD SEF+ + R
Sbjct: 145 TGKGYVEYETAADLATAVEKLDNSEFKGSNVRC 177
>gi|156358473|ref|XP_001624543.1| predicted protein [Nematostella vectensis]
gi|156211330|gb|EDO32443.1| predicted protein [Nematostella vectensis]
Length = 189
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 24/154 (15%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + +I +K+ GY F+EF+DYRDA+D + +G N G R+ VE HS +
Sbjct: 28 YGRVREISMKL-----GYGFVEFDDYRDADDCVYDLNGRNLLGERVVVE-------HSRN 75
Query: 63 MDRYSSYS-----------SGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
R S Y S R R+++R+ V L S ++WQDLK++M + G+V F
Sbjct: 76 PSRGSDYGYRRDSSSRSRSSRRGRTPPIRTEHRLAVENLSSRSNWQDLKEYMGKVGEVTF 135
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ + R G G+V++ + DDMK A++KLD +EF
Sbjct: 136 ADAHKRRQG-EGVVEFATKDDMKTALKKLDDTEF 168
>gi|432852804|ref|XP_004067393.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Oryzias
latipes]
Length = 146
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 75/116 (64%), Gaps = 6/116 (5%)
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 138
RR + V V GLP + SWQDLKDHMR AGDVCF+ V RD G+V++ +DM+YA+R
Sbjct: 6 RRREEDVGVPGLPPTGSWQDLKDHMREAGDVCFADVQRD---GEGVVEFLRREDMEYALR 62
Query: 139 KLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSR 193
+LDR+EFR + SY+RV ++ R + S + SRS SR R P+Y+R P R
Sbjct: 63 RLDRTEFRSHQGETSYIRV--FEDRGATSWARSRSRSRSRGRYSPPFYNRGSPPPR 116
>gi|332024474|gb|EGI64672.1| Serine-arginine protein 55 [Acromyrmex echinatior]
Length = 367
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 38/175 (21%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
YG D+ +K GY F+EF+DYRDA+DA+ +G G R+ VE A G R S
Sbjct: 60 YGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGKELLGERITVERARGTPRGSDQ 114
Query: 62 --------------------------SMDRYSSYSSGGSRGVSR-----RSDYRVLVTGL 90
S++R + +S + + R R++YR+ V L
Sbjct: 115 WRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLTVENL 174
Query: 91 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
S SWQDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI KLD +E
Sbjct: 175 SSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDKLDDTEL 228
>gi|89273959|emb|CAJ82241.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 261
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 82/157 (52%), Gaps = 20/157 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK G+ F+EF+D+RDA+DA+ +G R+ +E A R
Sbjct: 27 YGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGKVLCNERVTIEHARNRRGRGGM 81
Query: 63 MDR-------------YSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGD 108
M Y +SGG R G R+++R++V L S SWQDLKD MR+AG+
Sbjct: 82 MGGGGGGGGRYPNRFAYRQSNSGGPRYGPPVRTEHRIIVENLSSRVSWQDLKDFMRKAGE 141
Query: 109 VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
V + R G+V++ SY DMK A+ KLD E
Sbjct: 142 VTYVDAHRSNRN-EGVVEFASYTDMKNALDKLDGVEL 177
>gi|221042258|dbj|BAH12806.1| unnamed protein product [Homo sapiens]
Length = 143
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 5/90 (5%)
Query: 70 SSGGS-RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYT 128
S GG RG + +D R+ V LP SWQDLKDHMR AGDVC++ V+RD TG+V++
Sbjct: 2 SGGGVIRGPAGNNDCRIYVGNLPPGGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFV 58
Query: 129 SYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
+DM YA+RKLD ++FR + +Y+RV+
Sbjct: 59 RKEDMTYAVRKLDNTKFRSHEGETAYIRVK 88
>gi|85096852|ref|XP_960334.1| hypothetical protein NCU07069 [Neurospora crassa OR74A]
gi|28921822|gb|EAA31098.1| predicted protein [Neurospora crassa OR74A]
Length = 313
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 111/216 (51%), Gaps = 23/216 (10%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + DG +F G RL V+ A G R H
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVP--DGSDFMGERLTVQFARGAR-HREGG 84
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
++ + R RR+ +R+ ++GLP+ SWQDLKD R++G DV +S+ R++ G
Sbjct: 85 PGFTHERNSQPR--PRRTPHRMQISGLPNETSWQDLKDFARQSGLDVVYSETTRNQNG-E 141
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G V++ + D++ A+ KLD EF+ + V + D R+ R+ SRSP R R
Sbjct: 142 GFVEFENAADLRTAVEKLDNREFKGQRV-TCVANTQPDIPRNDHRARSRSP---RGRPYP 197
Query: 183 PY---YSRSRSPSRSWSYSPRSRSYSPRGKYSRRSP 215
P Y R P R YSPR Y R Y RSP
Sbjct: 198 PPIDDYDRRGPPPR--GYSPRRDGY--RDGYRDRSP 229
>gi|307189409|gb|EFN73819.1| Serine-arginine protein 55 [Camponotus floridanus]
Length = 387
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 38/175 (21%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
YG D+ +K GY F+EF+DYRDA+DA+ +G G R+ VE A G R S
Sbjct: 80 YGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGKELLGERITVERARGTPRGSDQ 134
Query: 62 --------------------------SMDRYSSYSSGGSRGVSR-----RSDYRVLVTGL 90
S++R + +S + + R R++YR+ V L
Sbjct: 135 WRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLTVENL 194
Query: 91 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
S SWQDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI KLD +E
Sbjct: 195 SSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDKLDDTEL 248
>gi|296412014|ref|XP_002835723.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629512|emb|CAZ79880.1| unnamed protein product [Tuber melanosporum]
Length = 342
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 17/232 (7%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G +V+I L G+ F++++ DA+D + G +F G L V+ A G R +
Sbjct: 34 GNVVEIKLMN-----GFGFIQYDSEADAKDVVPAYHGRDFKGQPLTVQFARGSRHNP--- 85
Query: 64 DRYSSYSSGGSRGVSR--RSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGG 120
R+ + G R R R+ +R+ ++GL SWQDLKD R++G DV FS+V R+R G
Sbjct: 86 -RHHDFPGGADRTFPRPRRTAFRMNISGLNPDTSWQDLKDFARKSGSDVVFSEVTRERDG 144
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNA-FSRSYVRVREYDSRRSYS---RSPSRSPYYS 176
G+V++ ++DD++ A+ LDR+EF+ S + + ++D R + RS S Y
Sbjct: 145 R-GMVEFETHDDLRRAVAFLDRTEFKGTQVSCTPDVLADHDVPRGHGPGRRSVSPRGYGG 203
Query: 177 RSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSP 228
R S +P P S Y SR Y R R P + RSP
Sbjct: 204 RRYSPNPSRGYHSPPRHSRRYESPSRGYRERSPRGGREPYYNGGGGGRDRSP 255
>gi|344273957|ref|XP_003408785.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Loxodonta
africana]
Length = 271
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIKDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|395504171|ref|XP_003756430.1| PREDICTED: serine/arginine-rich splicing factor 5 [Sarcophilus
harrisii]
Length = 266
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYSDLKNAIEKLSGKEI 169
>gi|126282694|ref|XP_001370225.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Monodelphis
domestica]
Length = 265
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYSDLKNAIEKLSGKEI 169
>gi|452989025|gb|EME88780.1| hypothetical protein MYCFIDRAFT_209897, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 209
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 88/174 (50%), Gaps = 15/174 (8%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G F G RL V+ A G R
Sbjct: 46 GEITEIKLM-----NGFGFIEYKDAMDARDVVPAFHGSEFMGERLVVQFARGSTRPREGF 100
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDR---G 119
+ + RR+ +R+ +TGLP SWQDLKD R++G DV +S+V R+R G
Sbjct: 101 EHQPRMAP-----RPRRTIHRMTITGLPFETSWQDLKDFARQSGLDVVYSEVNRERDPSG 155
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSP 173
G V+Y + D+ A+ KLD SEF+ + R + + D R R SRSP
Sbjct: 156 TGKGFVEYETAADLASAVEKLDNSEFKGSTVRC-ISDPQTDIPRPRERFRSRSP 208
>gi|426233598|ref|XP_004023549.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 5 [Ovis aries]
Length = 274
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGXIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|345309522|ref|XP_001517768.2| PREDICTED: serine/arginine-rich splicing factor 5-like, partial
[Ornithorhynchus anatinus]
Length = 251
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 11 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 65
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 66 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 125
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 126 PKLN-EGVVEFASYSDLKNAIEKLSGKEI 153
>gi|156030683|ref|XP_001584668.1| hypothetical protein SS1G_14437 [Sclerotinia sclerotiorum 1980]
gi|154700828|gb|EDO00567.1| hypothetical protein SS1G_14437 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 307
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G +F G RL V+ A G R +
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSDFMGERLTVQFARGTR----NR 83
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
D +++ R RR+ +R+ ++GLP SWQDLKD R++ DV +S+ RDR G
Sbjct: 84 DTFANPERTAPR--PRRTPHRMQISGLPGETSWQDLKDFARQSSLDVVYSETGRDRDGKG 141
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNA 148
V++ + D+K A+ KLD EF+ A
Sbjct: 142 SFVEFETAADLKTAVEKLDGREFKGA 167
>gi|401412768|ref|XP_003885831.1| Function: human SRp75 can complement a splicing-deficient extract,
related [Neospora caninum Liverpool]
gi|325120251|emb|CBZ55805.1| Function: human SRp75 can complement a splicing-deficient extract,
related [Neospora caninum Liverpool]
Length = 353
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 84/166 (50%), Gaps = 16/166 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYR----LRVE--LAHGG 56
+G IV ++ K GY FLE+ D RDA DAI G G+R LRVE LA G
Sbjct: 38 FGKIVKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGRPPPGFRDAAPLRVEIPLARSG 97
Query: 57 RRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
R S D +G RR + + V GLP S SWQDLKDH R GDV F++V +
Sbjct: 98 RTDGFSDDAMPRGLAG------RRGRFVLEVRGLPPSGSWQDLKDHFRGIGDVGFAEVRK 151
Query: 117 DRGG---MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
D + G V + S DM AI LD S FR + +S + VRE
Sbjct: 152 DPDAPDSVMGKVSFFSKRDMMEAIEALDGSTFRSHEGEKSRITVRE 197
>gi|432107111|gb|ELK32534.1| Serine/arginine-rich splicing factor 5 [Myotis davidii]
Length = 280
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|417398268|gb|JAA46167.1| Putative serine/arginine-rich splicing factor 5 [Desmodus rotundus]
Length = 278
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|225712276|gb|ACO11984.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 329
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 78/156 (50%), Gaps = 18/156 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + +I +K Y F EF+DYRDA+DA+ +G + R+ VE A GGRR
Sbjct: 30 YGRVYNIFIK----SGKYGFCEFDDYRDADDAVYKLNGCELNSERITVEHARGGRRAEGR 85
Query: 63 MDRYSSYSSGGSRGVSR-------------RSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
S G R R++YRV+V L + SWQDLKD MRRAG+V
Sbjct: 86 SSGGSGGGGGYRGDRYRGRRGGRGKYGPPTRTNYRVIVENLSTRVSWQDLKDVMRRAGEV 145
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
F+ D+ G+V++ S DM+ AI K D E
Sbjct: 146 TFADAHNDKRN-EGVVEFISRRDMERAIDKFDNHEL 180
>gi|402876562|ref|XP_003902030.1| PREDICTED: serine/arginine-rich splicing factor 5 [Papio anubis]
Length = 272
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|348573304|ref|XP_003472431.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cavia
porcellus]
Length = 273
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|291410875|ref|XP_002721708.1| PREDICTED: splicing factor, arginine/serine-rich 5 [Oryctolagus
cuniculus]
Length = 275
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|351708666|gb|EHB11585.1| Splicing factor, arginine/serine-rich 5 [Heterocephalus glaber]
Length = 270
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRSAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|198421232|ref|XP_002126906.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 1 [Ciona intestinalis]
Length = 272
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 12/148 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG-----GR 57
YG I D+ LK G+ F+ F+D RDA+DAI +G + G R+ +E+A G G
Sbjct: 28 YGKINDLMLK-----NGFGFVIFDDERDADDAIHDLNGKSLCGERVMLEIAKGTPRGPGG 82
Query: 58 RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
SSS ++G+ YR++V L S +WQDLKD+MR+ G+V ++ R
Sbjct: 83 ESSSSSYYQQQQPRSSTKGIPNHG-YRLIVENLSSRVTWQDLKDYMRQCGEVVYADANRY 141
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R G+V+++S +MKYAI KL+ +E
Sbjct: 142 RRN-EGVVEFSSRKEMKYAIEKLNGTEI 168
>gi|350408072|ref|XP_003488292.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Bombus impatiens]
Length = 394
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 38/175 (21%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
YG D+ +K GY F+EF+DYRDA+DA+ +G G R+ VE A G R S
Sbjct: 80 YGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGKELLGERITVERARGTPRGSDQ 134
Query: 62 --------------------------SMDRYSSYSSGGSRGVSR-----RSDYRVLVTGL 90
S++R + +S + + R R++YR+ V L
Sbjct: 135 WRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLTVENL 194
Query: 91 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
S SWQDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI KLD +E
Sbjct: 195 SSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDKLDDTEL 248
>gi|307133720|ref|NP_001182516.1| splicing factor, arginine/serine-rich 5 [Equus caballus]
Length = 271
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|307133730|ref|NP_001182521.1| splicing factor, arginine/serine-rich 5 [Pongo abelii]
gi|109084084|ref|XP_001109903.1| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 2
[Macaca mulatta]
gi|297298154|ref|XP_001110094.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 3
[Macaca mulatta]
gi|297298156|ref|XP_001110146.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 4
[Macaca mulatta]
gi|119601409|gb|EAW81003.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Homo
sapiens]
Length = 271
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|149643059|ref|NP_001092399.1| serine/arginine-rich splicing factor 5 [Bos taurus]
gi|73963391|ref|XP_867135.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 9 [Canis
lupus familiaris]
gi|301763317|ref|XP_002917076.1| PREDICTED: splicing factor, arginine/serine-rich 5-like [Ailuropoda
melanoleuca]
gi|345803610|ref|XP_867196.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 15 [Canis
lupus familiaris]
gi|410962543|ref|XP_003987828.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Felis
catus]
gi|410962545|ref|XP_003987829.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Felis
catus]
gi|410962547|ref|XP_003987830.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 3 [Felis
catus]
gi|148878097|gb|AAI46186.1| SFRS5 protein [Bos taurus]
gi|281349392|gb|EFB24976.1| hypothetical protein PANDA_005250 [Ailuropoda melanoleuca]
gi|296482956|tpg|DAA25071.1| TPA: splicing factor, arginine/serine-rich 5 [Bos taurus]
gi|440897364|gb|ELR49075.1| Serine/arginine-rich splicing factor 5 [Bos grunniens mutus]
Length = 272
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|86991438|ref|NP_001034554.1| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|86991440|ref|NP_008856.2| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|296215383|ref|XP_002754098.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Callithrix jacchus]
gi|332229001|ref|XP_003263676.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Nomascus leucogenys]
gi|332229003|ref|XP_003263677.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Nomascus leucogenys]
gi|332842591|ref|XP_510034.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 6 [Pan
troglodytes]
gi|332842593|ref|XP_001143701.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Pan
troglodytes]
gi|390469250|ref|XP_002754097.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Callithrix jacchus]
gi|397507326|ref|XP_003824150.1| PREDICTED: serine/arginine-rich splicing factor 5 [Pan paniscus]
gi|403264529|ref|XP_003924530.1| PREDICTED: serine/arginine-rich splicing factor 5 [Saimiri
boliviensis boliviensis]
gi|426377318|ref|XP_004055414.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Gorilla gorilla gorilla]
gi|426377320|ref|XP_004055415.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Gorilla gorilla gorilla]
gi|3929378|sp|Q13243.1|SRSF5_HUMAN RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|1049080|gb|AAA93070.1| SRp40-1 [Homo sapiens]
gi|17511888|gb|AAH18823.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|30583017|gb|AAP35752.1| splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|61362109|gb|AAX42162.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|61362114|gb|AAX42163.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|71297198|gb|AAH40209.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|90075796|dbj|BAE87578.1| unnamed protein product [Macaca fascicularis]
gi|119601408|gb|EAW81002.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601411|gb|EAW81005.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601412|gb|EAW81006.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|208967490|dbj|BAG73759.1| splicing factor, arginine/serine-rich 5 [synthetic construct]
gi|355693393|gb|EHH27996.1| hypothetical protein EGK_18328 [Macaca mulatta]
gi|355778697|gb|EHH63733.1| hypothetical protein EGM_16760 [Macaca fascicularis]
gi|380815560|gb|AFE79654.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815562|gb|AFE79655.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815564|gb|AFE79656.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420727|gb|AFH33577.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420729|gb|AFH33578.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420731|gb|AFH33579.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|410218428|gb|JAA06433.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410218430|gb|JAA06434.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252412|gb|JAA14173.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252414|gb|JAA14174.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303912|gb|JAA30556.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303914|gb|JAA30557.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357772|gb|JAA44585.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357774|gb|JAA44586.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410358000|gb|JAA44587.1| splicing factor, arginine/serine-rich 5 [Pan troglodytes]
Length = 272
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|119226243|ref|NP_001073162.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226245|ref|NP_033185.2| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226247|ref|NP_001073163.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|158631248|ref|NP_062130.2| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774128|ref|NP_001182434.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774130|ref|NP_001182435.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|354472150|ref|XP_003498303.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cricetulus
griseus]
gi|1168968|sp|Q09167.1|SRSF5_RAT RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Insulin-induced growth response protein CL-4;
AltName: Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|410516929|sp|O35326.2|SRSF5_MOUSE RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|349079|gb|AAA62266.1| growth response protein [Rattus norvegicus]
gi|34849628|gb|AAH58479.1| Sfrs5 protein [Rattus norvegicus]
gi|52139013|gb|AAH82593.1| Splicing factor, arginine/serine-rich 5 (SRp40, HRS) [Mus musculus]
gi|74144656|dbj|BAE27313.1| unnamed protein product [Mus musculus]
gi|148670738|gb|EDL02685.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670740|gb|EDL02687.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670743|gb|EDL02690.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670745|gb|EDL02692.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670746|gb|EDL02693.1| mCG7614, isoform CRA_a [Mus musculus]
gi|149025034|gb|EDL81401.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|149025037|gb|EDL81404.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|344235744|gb|EGV91847.1| Splicing factor, arginine/serine-rich 5 [Cricetulus griseus]
Length = 269
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|335292735|ref|XP_001927454.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Sus
scrofa]
gi|335292737|ref|XP_001927469.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Sus
scrofa]
Length = 272
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|12841460|dbj|BAB25217.1| unnamed protein product [Mus musculus]
gi|148670741|gb|EDL02688.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670742|gb|EDL02689.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670747|gb|EDL02694.1| mCG7614, isoform CRA_c [Mus musculus]
Length = 270
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|30583835|gb|AAP36166.1| Homo sapiens splicing factor, arginine/serine-rich 5 [synthetic
construct]
gi|60653861|gb|AAX29623.1| splicing factor arginine/serine-rich 5 [synthetic construct]
Length = 273
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|432936464|ref|XP_004082128.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oryzias latipes]
Length = 289
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 81/151 (53%), Gaps = 14/151 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK G+ F+EF+D+RDA+DA+ +G R+ +E A R
Sbjct: 44 YGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGKELLSERVTIEHARSRRGRGGG 98
Query: 63 MDRYSSYSSG-------GSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
+ + G GSR G R+++R++V L S SWQDLKD MR+AG+V F
Sbjct: 99 PPGMARFGGGYRQSRNTGSRYGPPVRTEHRLIVENLSSRISWQDLKDLMRKAGEVTFVDA 158
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R G+V++ S D+K AI KLD +E
Sbjct: 159 HRPTKN-EGVVEFASRSDLKNAISKLDGTEL 188
>gi|432936462|ref|XP_004082127.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oryzias latipes]
Length = 272
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 81/151 (53%), Gaps = 14/151 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK G+ F+EF+D+RDA+DA+ +G R+ +E A R
Sbjct: 27 YGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGKELLSERVTIEHARSRRGRGGG 81
Query: 63 MDRYSSYSSG-------GSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
+ + G GSR G R+++R++V L S SWQDLKD MR+AG+V F
Sbjct: 82 PPGMARFGGGYRQSRNTGSRYGPPVRTEHRLIVENLSSRISWQDLKDLMRKAGEVTFVDA 141
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R G+V++ S D+K AI KLD +E
Sbjct: 142 HRPTKN-EGVVEFASRSDLKNAISKLDGTEL 171
>gi|119601416|gb|EAW81010.1| splicing factor, arginine/serine-rich 5, isoform CRA_e [Homo
sapiens]
Length = 209
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|54020785|ref|NP_001005638.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
gi|49250524|gb|AAH74634.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 85/158 (53%), Gaps = 21/158 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK G+ F+EF+D+RDA+DA+ +G R+ +E A R
Sbjct: 27 YGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGKVLCNERVTIEHARNRRGRGGM 81
Query: 63 M-----------DRYS---SYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG 107
M +R++ S S G SR G R+++R++V L S SWQDLKD MR+AG
Sbjct: 82 MGGGGGGGGRYPNRFAYRQSNSGGPSRYGPPVRTEHRIIVENLSSRVSWQDLKDFMRKAG 141
Query: 108 DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+V + R G+V++ SY DMK A+ KLD E
Sbjct: 142 EVTYVDAHRSNRN-EGVVEFASYTDMKNALDKLDGVEL 178
>gi|395849594|ref|XP_003797407.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Otolemur garnettii]
gi|395849596|ref|XP_003797408.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Otolemur garnettii]
Length = 270
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|335307313|ref|XP_003360793.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Sus scrofa]
Length = 221
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 169
>gi|355721871|gb|AES07404.1| splicing factor SRp55-1 [Mustela putorius furo]
Length = 250
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 77/136 (56%), Gaps = 11/136 (8%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH---------SSSMDRYSSYS 70
Y F+EFED RDA+DA+ +G G R+ VE A G RR S +
Sbjct: 1 YGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYSYGSRXGGGGYSSRRT 60
Query: 71 SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTS 129
SG + G R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ S
Sbjct: 61 SGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRS 119
Query: 130 YDDMKYAIRKLDRSEF 145
Y DMK A+ KLD +E
Sbjct: 120 YSDMKRALDKLDGTEI 135
>gi|154304025|ref|XP_001552418.1| pre-mRNA splicing factor [Botryotinia fuckeliana B05.10]
Length = 308
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 15/148 (10%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G +F G RL V+ A G R +
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSDFMGERLTVQFARGTRNRDT-- 85
Query: 64 DRYSSYSSGGSRGVSR--RSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGG 120
+++ R R R+ +R+ ++GLP SWQDLKD R++ DV +S+ RDR G
Sbjct: 86 -----FANNPERTAPRPRRTPHRMQISGLPGETSWQDLKDFARQSSLDVVYSETGRDRDG 140
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNA 148
V++ + D+K A+ KLD EF+ A
Sbjct: 141 KGSFVEFETAADLKTAVEKLDGREFKGA 168
>gi|2435503|gb|AAC39946.1| HRS [Mus musculus]
Length = 270
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 77/144 (53%), Gaps = 12/144 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 81
Query: 63 MDRYSSYSSGGSRGVSRR------SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS + G RR + R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 82 RGRYSDRLAVADLGNDRRKCSTCKNRNRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 141
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKL 140
+ G+V++ SY D+K AI KL
Sbjct: 142 PKLN-EGVVEFASYGDLKNAIEKL 164
>gi|347441498|emb|CCD34419.1| hypothetical protein [Botryotinia fuckeliana]
Length = 324
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 15/148 (10%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G +F G RL V+ A G R +
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSDFMGERLTVQFARGTRNRDT-- 85
Query: 64 DRYSSYSSGGSRGVSR--RSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGG 120
+++ R R R+ +R+ ++GLP SWQDLKD R++ DV +S+ RDR G
Sbjct: 86 -----FANNPERTAPRPRRTPHRMQISGLPGETSWQDLKDFARQSSLDVVYSETGRDRDG 140
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNA 148
V++ + D+K A+ KLD EF+ A
Sbjct: 141 KGSFVEFETAADLKTAVEKLDGREFKGA 168
>gi|290562251|gb|ADD38522.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 331
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 79/158 (50%), Gaps = 20/158 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + +I +K Y F EF+DYRDA+DA+ +G + R+ VE A GGRR
Sbjct: 30 YGRVYNIFIK----SGKYGFCEFDDYRDADDAVYKLNGCELNSERITVEHARGGRRAEGR 85
Query: 63 MDRYSSYSSGGSRGVSR---------------RSDYRVLVTGLPSSASWQDLKDHMRRAG 107
S GG R R++YRV+V L + SWQDLKD MRRAG
Sbjct: 86 SSGGSGGGGGGGYRGDRYRGRGGGRGKYGPPTRTNYRVIVENLSTRVSWQDLKDVMRRAG 145
Query: 108 DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+V F+ D+ G+V++ S DM+ AI K D E
Sbjct: 146 EVTFADAHNDKRN-EGVVEFISRRDMERAIDKFDNHEL 182
>gi|328786878|ref|XP_391860.4| PREDICTED: serine/arginine-rich splicing factor 4 [Apis mellifera]
Length = 419
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 38/175 (21%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
YG D+ +K GY F+EF+DYRDA+DA+ +G G R+ VE A G R S
Sbjct: 80 YGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGKELLGERITVERARGTPRGSDQ 134
Query: 62 --------------------------SMDRYSSYSSGGSRGVSR-----RSDYRVLVTGL 90
S++R + +S + + R R++YR+ V L
Sbjct: 135 WRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLTVENL 194
Query: 91 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
S SWQDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI KLD +E
Sbjct: 195 SSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDKLDDTEL 248
>gi|327281934|ref|XP_003225700.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Anolis
carolinensis]
Length = 266
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 81/155 (52%), Gaps = 23/155 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRL---RVELAHGGRRH 59
YG I DIDLK G+ F+EFED RDA+DA+ Y DG L RV + H R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----YELDGKELCSERVTIEHARARS 76
Query: 60 SSSM-------DRYSSYSSGGSRGVS--RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
DR+SS R + R++ R++V L S SWQDLKD MR+AG+V
Sbjct: 77 RGGRGRGGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVT 136
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
F+ R + G+V++ SY D+K AI KL E
Sbjct: 137 FADAHRPKLN-EGVVEFASYSDLKNAIEKLSGKEI 170
>gi|55824572|gb|AAV66406.1| splicing factor arginine/serine-rich protein 5 [Macaca
fascicularis]
Length = 208
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 3 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 57
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
RYS +SS R R R++ R++V L S SWQDLKD MR+AG+V F+ R
Sbjct: 58 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR 117
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ G+V++ SY D+K AI KL E
Sbjct: 118 PKLN-EGVVEFASYGDLKNAIEKLSGKEI 145
>gi|398406965|ref|XP_003854948.1| hypothetical protein MYCGRDRAFT_99129 [Zymoseptoria tritici IPO323]
gi|339474832|gb|EGP89924.1| hypothetical protein MYCGRDRAFT_99129 [Zymoseptoria tritici IPO323]
Length = 333
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G F G RL V+ A G R
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSEFMGERLVVQFARGSNRPRDGF 87
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRG--- 119
++ + RR+ +R+ +TGLP SWQDLKD R++G DV +S+V R+R
Sbjct: 88 EQQPRQAP-----RPRRTVHRMTITGLPFETSWQDLKDFARQSGLDVVYSEVGRERDSSG 142
Query: 120 -GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 152
G V+Y + D+ A+ KLD +EF+ A R
Sbjct: 143 TGKGSFVEYETAADLAAAVEKLDNNEFKGATVRC 176
>gi|294890805|ref|XP_002773323.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239878375|gb|EER05139.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 317
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 86/167 (51%), Gaps = 27/167 (16%)
Query: 16 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM------------ 63
R YA+++F D++DA DA + R+GY DG + VE+ R S S+
Sbjct: 44 RRTAYAYVQFRDWQDAADAAKSRNGYEIDGQPITVEVDGDYRDDSRSIPSKGKGKGGGRY 103
Query: 64 ----------DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 113
S + S G+S + YRV+VT LP ASWQDLKD MR AG+ F++
Sbjct: 104 GDYGGGYGKGGSGSPSAGYDSMGMSEKY-YRVVVTNLPRGASWQDLKDKMRDAGECRFTE 162
Query: 114 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAF-SRSYVRVREY 159
V RD G+ G + D++ A+R LD +E ++ F S +RV E+
Sbjct: 163 VTRDGVGVAG---FAGQSDVERAVRTLDDTEMKSHFGDTSIIRVEEF 206
>gi|350408075|ref|XP_003488293.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Bombus impatiens]
Length = 418
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 38/175 (21%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS- 61
YG D+ +K GY F+EF+DYRDA+DA+ +G G R+ VE A G R S
Sbjct: 80 YGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGKELLGERITVERARGTPRGSDQ 134
Query: 62 --------------------------SMDRYSSYSSGGSRGVSR-----RSDYRVLVTGL 90
S++R + +S + + R R++YR+ V L
Sbjct: 135 WRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLTVENL 194
Query: 91 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
S SWQDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI KLD +E
Sbjct: 195 SSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDKLDDTEL 248
>gi|383848642|ref|XP_003699957.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Megachile
rotundata]
Length = 418
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 38/175 (21%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS-- 60
YG D+ +K GY F+EF+DYRDA+DA+ +G G R+ VE A G R S
Sbjct: 80 YGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGKELLGERITVERARGTPRGSDQ 134
Query: 61 -------------------------SSMDRYSSYSSGGSRGVSR-----RSDYRVLVTGL 90
S++R + +S + + R R++YR++V L
Sbjct: 135 WRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLIVENL 194
Query: 91 PSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
S SWQDLKD+MR AG+V ++ + R G+V++ +Y D+K AI KLD +E
Sbjct: 195 SSRVSWQDLKDYMRHAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDKLDDTEL 248
>gi|291224545|ref|XP_002732262.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 274
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 98/190 (51%), Gaps = 36/190 (18%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + +I+LK G+ F+EFED RD++DA+ +G G R+ +E A G R
Sbjct: 51 YGRLREINLK-----NGFGFVEFEDPRDSDDAVYELNGKELCGERVTIEHARGPVRRDY- 104
Query: 63 MDRYSSYSS-GGSR-----------------GVSR-----RSDYRVLVTGLPSSASWQDL 99
R S YS+ GG R GV + R+++R++V L S SWQDL
Sbjct: 105 --RDSGYSNRGGDRDSYRSDRGGFGPPRRRGGVDKYGPPTRTEHRLIVENLSSRCSWQDL 162
Query: 100 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 159
KD+MR+AG+V F+ + G+V+ S+ D+K I KLD +E S +++ E
Sbjct: 163 KDYMRQAGEVTFADAHKQHKN-EGVVELASHSDLKNVIAKLDGTE----ISGRKIKLIED 217
Query: 160 DSRRSYSRSP 169
+R SRSP
Sbjct: 218 RPKRHRSRSP 227
>gi|339239261|ref|XP_003381185.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
gi|316975801|gb|EFV59199.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
Length = 646
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 87/167 (52%), Gaps = 36/167 (21%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I LK GY F+EF++ RDA+DA+ +G G ++RVE+AH S
Sbjct: 27 YGRIREITLK-----NGYGFVEFDERRDADDAVHDLNGKPLLGEKIRVEMAH-----RFS 76
Query: 63 MDRYSSYSS-------GGSRGVSR-----------------RSDYRVLVTGLPSSASWQD 98
DR++S G RG R RS YR+LV L S+ SW++
Sbjct: 77 RDRFASGRGGGFRGRYNGDRGYDRSRHGGRWERRRPVNPPRRSRYRLLVENLSSAISWRE 136
Query: 99 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
LKD M +AG+VCF+ V+ R GIV++ S M+ A++KL+ E
Sbjct: 137 LKDFMNQAGEVCFTDVYPQR--REGIVEFESSSAMENALKKLNGEEL 181
>gi|321472329|gb|EFX83299.1| hypothetical protein DAPPUDRAFT_195083 [Daphnia pulex]
Length = 221
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 20/157 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + ++ +K GY F+EFEDYRDA+DA+ +G G R+ VE A G R
Sbjct: 26 YGKLREVLIK-----NGYGFVEFEDYRDADDAVYELNGKELCGERVSVEHARGSGRRGGR 80
Query: 63 MD-----------RYSSYSSGGS---RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGD 108
D R S++ + G R+DYR++V L S SWQDLKD+MR+AG+
Sbjct: 81 DDRNDRDHRDRGSRRSNWMDNNAPPRYGPPTRTDYRLVVENLSSRVSWQDLKDYMRQAGE 140
Query: 109 VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
V ++ + G+V++ SY D+K AI KLD ++
Sbjct: 141 VTYADAHKQHRN-EGVVEFASYSDLKTAIEKLDGTDL 176
>gi|147907282|ref|NP_001079543.1| keratin 5, gene 1 b [Xenopus laevis]
gi|28278124|gb|AAH44085.1| MGC52712 protein [Xenopus laevis]
Length = 261
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 84/159 (52%), Gaps = 25/159 (15%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK G+ F+EF+D+RDA+DA+ +G R+ +E A R H
Sbjct: 27 YGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGKVLCSERVTIEHA---RNHRGR 78
Query: 63 M------------DRYS---SYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRA 106
+R++ S S G SR G R+++R++V L S SWQDLK MR+A
Sbjct: 79 GGMMGGGGGGRYPNRFAYRQSNSGGNSRYGPPVRTEHRIIVENLSSRVSWQDLKGFMRKA 138
Query: 107 GDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G+V + R G+V++ SY DMK A+ KLD E
Sbjct: 139 GEVTYVDAHRSNRN-EGVVEFASYTDMKSALDKLDGVEL 176
>gi|402085269|gb|EJT80167.1| hypothetical protein GGTG_00170 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 318
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E+ED DA D + G F G RL V+ A G R
Sbjct: 33 GKITEIKLMN-----GFGFIEYEDMMDARDVVPAFHGSQFMGERLTVQFARGSRNRDGGG 87
Query: 64 DRYSSYSSGGSRGVSR--RSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGG 120
+ G R R R+ YR+ ++GLP+ SWQDLKD R++ DV +S+ R G
Sbjct: 88 GAGNGSGFSGERSAPRPRRTPYRMQISGLPNDTSWQDLKDFARQSQLDVVYSETGRSNNG 147
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRS 180
G V++ + D+ A+ LD EF+ R + + P R RS
Sbjct: 148 -EGFVEFETAADLATAVDALDGKEFKEKVVRCVANAQ------------ADPPVRDRGRS 194
Query: 181 RSPYYSRSRSPSRSWSYSPRSRSYSPRG-KYSRRSP 215
RSP P RSY+P G Y RR P
Sbjct: 195 RSP---------------PGRRSYAPPGDDYDRRGP 215
>gi|402085268|gb|EJT80166.1| hypothetical protein, variant [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 317
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E+ED DA D + G F G RL V+ A G R
Sbjct: 33 GKITEIKLMN-----GFGFIEYEDMMDARDVVPAFHGSQFMGERLTVQFARGSRNRDGGG 87
Query: 64 DRYSSYSSGGSRGVSR--RSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGG 120
+ G R R R+ YR+ ++GLP+ SWQDLKD R++ DV +S+ R G
Sbjct: 88 GAGNGSGFSGERSAPRPRRTPYRMQISGLPNDTSWQDLKDFARQSQLDVVYSETGRSNNG 147
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRS 180
G V++ + D+ A+ LD EF+ R + + P R RS
Sbjct: 148 -EGFVEFETAADLATAVDALDGKEFKEKVVRCVANAQ------------ADPPVRDRGRS 194
Query: 181 RSPYYSRSRSPSRSWSYSPRSRSYSPRG-KYSRRSP 215
RSP P RSY+P G Y RR P
Sbjct: 195 RSP---------------PGRRSYAPPGDDYDRRGP 215
>gi|225718228|gb|ACO14960.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 355
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 80/151 (52%), Gaps = 12/151 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + +I +K Y F EF+DYRDA+DA+ +G +G R+ VE A GGRR
Sbjct: 30 YGRVYNIFIK----SGKYGFCEFDDYRDADDAVYKLNGGELNGERITVEHARGGRRAEGR 85
Query: 63 MDRYSSYSSGGSRGVSR-------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
+ + G R R++YRV+V L S SWQDLKD MRRAG+V F+
Sbjct: 86 GGGFRGDRNRGRGVGGRGKYGPPTRTNYRVIVENLSSRVSWQDLKDVMRRAGEVTFADAH 145
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 146
DR G+V++ S DM AI K D E +
Sbjct: 146 NDRRN-EGVVEFISRRDMDRAIEKFDNHELQ 175
>gi|341881506|gb|EGT37441.1| hypothetical protein CAEBREN_07353 [Caenorhabditis brenneri]
Length = 401
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG----GRR 58
+G + +D K + AF+ + D R+A+DA+ + F G RLRVE +G GR
Sbjct: 29 WGEVTYVDFK-QTKTGRCAFVGYYDRREAQDAVMMMNSAVFHGRRLRVEFPNGLGPRGRN 87
Query: 59 HS--SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
SSM+ + +G+ RR+D+RV V G+P + SWQD+KDH+R AG+V F+ +
Sbjct: 88 GQPMSSMNSNARIRRPPGQGIQRRTDFRVQVRGIPETGSWQDIKDHVRAAGEVVFADI-- 145
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
RG GIV++ ++ I +F + + + V+++ D
Sbjct: 146 -RGHGIGIVEFEEEGSVRKCIEMFHNQDFTSHYHET-VKLQMID 187
>gi|50540286|ref|NP_001002610.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
gi|49900455|gb|AAH75982.1| Splicing factor, arginine/serine-rich 5b [Danio rerio]
Length = 285
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 76/151 (50%), Gaps = 14/151 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EF+D RDAEDA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLKR-----GFGFVEFDDPRDAEDAVYELDGKELCNERVTIEHARVRLRGGRG 81
Query: 63 MDRYSSYSSGGSRGVS--------RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
+ + RG R++ R++V L S SWQDLKD MR+AG+V F+
Sbjct: 82 RGGGGRFPARYGRGSQDSRRNPPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADA 141
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R G+V++ S+ D+K A+ KL E
Sbjct: 142 HRPNLN-EGVVEFASHSDLKNALEKLSGKEI 171
>gi|406862976|gb|EKD16025.1| pre-mRNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 326
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 106/223 (47%), Gaps = 36/223 (16%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGR--------DGYNFDGYRLRVELAHG 55
G I +I L G+ F+E++D DA D + G G +F G RL V+ A G
Sbjct: 46 GEITEIKLMN-----GFGFIEYKDAMDARDVVPGMTAQQLQAFHGSDFMGERLTVQFARG 100
Query: 56 GRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQV 114
R + D +++ R RR+ +R+ ++GLP SWQDLKD R++ DV +S+
Sbjct: 101 TR----NRDTFAASERTAPR--PRRTPHRMQISGLPGETSWQDLKDFARQSSLDVVYSET 154
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY-DSRRSYSRSPSRSP 173
RDR G V++ + D+K A+ KLD EF+ VRV D++ R
Sbjct: 155 GRDRDGKGSFVEFETALDLKTAVEKLDGREFKG------VRVTCIADTQPDIPR------ 202
Query: 174 YYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSP-RGKYSRRSP 215
R RSRSP R+ P SR YSP R Y RSP
Sbjct: 203 --DRGRSRSPIPRRAHLVDDYDRRGPPSRGYSPRRDTYRERSP 243
>gi|348515955|ref|XP_003445505.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oreochromis niloticus]
Length = 258
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 77/143 (53%), Gaps = 26/143 (18%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK G+ F+EF+D+RDA+DA+ Y +G L E R S
Sbjct: 27 YGRIREINLK-----NGFGFVEFDDHRDADDAV-----YELNGKELCSE------RSLSG 70
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+RY G R+D+R++V L S SWQDLKD MR+AG+V F R
Sbjct: 71 PNRY---------GPPVRTDHRLVVENLSSRTSWQDLKDLMRKAGEVTFVDAHRPTKN-E 120
Query: 123 GIVDYTSYDDMKYAIRKLDRSEF 145
G+V++ S DMK AI KLD +E
Sbjct: 121 GVVEFASRSDMKNAISKLDGTEL 143
>gi|299472989|emb|CBN77390.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 313
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 138
R+++YR +VTGLP SASWQDLKDHMR+AGDV ++ V +GG G+V + + + M YA+R
Sbjct: 190 RQTEYRAVVTGLPQSASWQDLKDHMRKAGDVNYADV-DHKGG--GVVHFNNKEGMDYALR 246
Query: 139 KLDRSEFRNAFSRSYVRV 156
KLD SEF N + + + V
Sbjct: 247 KLDGSEFSNRYDTATISV 264
>gi|294950021|ref|XP_002786421.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
gi|239900713|gb|EER18217.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
Length = 317
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 36/175 (20%)
Query: 16 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSG--- 72
R YA+++F D++DA DA + R+GY DG + VE+ R D Y+ G
Sbjct: 44 RRTAYAYVQFRDWQDAADAAKSRNGYEIDGQPITVEVDSDSRD-----DSRGPYAKGKGK 98
Query: 73 -----------------------GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
S G+S YRV+VT LP ASWQDLKD MR AG+
Sbjct: 99 GGRYDDYGGGYGKGGSGSPLGFYDSMGMSENY-YRVVVTNLPRGASWQDLKDRMRDAGEC 157
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFS-RSYVRVREYDSRR 163
F++V RD G+ G + D++ A+R LD +E ++ F S +RV E++ +
Sbjct: 158 RFTEVTRDGVGVAG---FAGQSDVERAVRTLDDTEMKSHFGDTSIIRVEEFNEEK 209
>gi|157110209|ref|XP_001651001.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108883952|gb|EAT48177.1| AAEL000769-PA [Aedes aegypti]
Length = 247
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I +I L+ GYAF+EF+DYRDAEDAI +G G R+ VE R S
Sbjct: 26 FGRIREILLR-----RGYAFVEFDDYRDAEDAIYELNGAKLLGQRIVVEATKRPPRFGGS 80
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+R +R+ +R++V L S W++LK +MR+AG+V F+ RDR
Sbjct: 81 SNRPKP---------PQRTYHRLIVENLSSRIDWRELKAYMRKAGNVTFADAHRDRMN-E 130
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSY 153
G+V++ S DMK A++ D +E + R Y
Sbjct: 131 GVVEFASRHDMKQALKMFDDTELNGRYIRLY 161
>gi|56797744|ref|NP_001008732.1| serine/arginine-rich splicing factor 6b [Danio rerio]
gi|56541079|gb|AAH86820.1| Splicing factor, arginine/serine-rich 6b [Danio rerio]
Length = 355
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 20/157 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG------- 55
YG +++ DLK GY F+EFED RDA+DA+ +G G R+ VE A G
Sbjct: 25 YGKLMETDLK-----NGYGFVEFEDTRDADDAVYELNGKELCGERVIVEHARGPRRDRDG 79
Query: 56 -------GRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGD 108
S+S S S G R++YR++V L S SWQDLKD MR+AG+
Sbjct: 80 YGGGYGGFGGRSNSGYSSRSRSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGE 139
Query: 109 VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
V ++ ++R G++++ S+ DM+ A+ KLD ++
Sbjct: 140 VTYADAHKERTN-EGVIEFRSHSDMRRALDKLDVTDI 175
>gi|322694046|gb|EFY85887.1| pre-mRNA splicing factor [Metarhizium acridum CQMa 102]
Length = 314
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 106/225 (47%), Gaps = 36/225 (16%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I ++ L G+ F+E++D DA D + DG +F G RL V+ A G R+ S
Sbjct: 34 GDITEVKLMN-----GFGFIEYKDPMDARDVVP--DGSDFMGERLTVQFARGPRQRESGF 86
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ RR+ +R+ +TGLP+ SWQDLKD R+ G DV +S+ RD G
Sbjct: 87 SGHERAPP-----RPRRTPHRMQITGLPNETSWQDLKDFARQPGLDVVYSETGRDSNGR- 140
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV-------------RVREYDSRRSYSRSP 169
G V+Y + D++ A+ KLD EF+ + R R RR Y+ P
Sbjct: 141 GFVEYETAADLRTAVDKLDGREFKGNRVQCIADTQPDMPPRDGRGRSRSPGGRRPYNNMP 200
Query: 170 SRSPYYSR--------SRSRSPYYSRSRSPSRSWSYSPRSRSYSP 206
+R Y R +R PY R RSP R + Y R+R SP
Sbjct: 201 TRFDEYDRRGPPPRGYNRDPGPYGYRDRSPRREY-YEDRARYRSP 244
>gi|296824244|ref|XP_002850623.1| pre-mRNA splicing factor [Arthroderma otae CBS 113480]
gi|238838177|gb|EEQ27839.1| pre-mRNA splicing factor [Arthroderma otae CBS 113480]
Length = 363
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 110/253 (43%), Gaps = 62/253 (24%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRD------------------------ 39
G I +I L G+ F+E+ED DA+D + G D
Sbjct: 52 GKITEIKLMQ-----GFGFIEYEDAMDAKDVVPGEDTSVVAFTFLDFFFLCFSLFSVYSM 106
Query: 40 ----------------GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDY 83
G +F G RL V+ A G RR + + RR+ Y
Sbjct: 107 DDALLIMGPVLILPSNGTDFKGERLTVQFARGPRRREP----FPGPPERSTAPRPRRTIY 162
Query: 84 RVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 142
R+ +TGLP + SWQDLKD R++G DV +S+ RDR G G V++ + +D++ A+ KLD
Sbjct: 163 RMQITGLPET-SWQDLKDFARQSGLDVVYSET-RDRDG-KGFVEFENGNDLRTAVEKLDG 219
Query: 143 SEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSR 202
++F+ + ++ R + PY SRS R P Y P+ + R
Sbjct: 220 TDFKGSRVTCTADIQPPMEDRV-----PKDPYRSRSPRRGPPYP----PAEDYDRRGPPR 270
Query: 203 SYSPRGKYSRRSP 215
YSPRG Y RSP
Sbjct: 271 GYSPRGHYRERSP 283
>gi|405963003|gb|EKC28616.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 553
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 85/183 (46%), Gaps = 46/183 (25%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + D+ LK GY F+EFEDYRDA+DA+ +G + G R+ VE A GG R
Sbjct: 265 YGRLRDVMLK-----NGYGFVEFEDYRDADDAVYELNGKDLAGERVIVEHARGGPRGDDR 319
Query: 63 MDRYSSY---------SSGGSRGVSRRSDYRVLVTGLPSSASWQ---------------- 97
+ Y Y G R++YR++V L S SWQ
Sbjct: 320 RNSYRDYPPARRSRGGGGRDKYGPPTRTEYRLIVENLSSRVSWQVSWFHCEDELGNHATT 379
Query: 98 ---------------DLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 142
DLKD+MR+AG+V ++ ++ GIV++ SY DMK A+ KLD
Sbjct: 380 LTVGGAFRVQSTAVEDLKDYMRQAGEVTYADAHKEHKN-EGIVEFASYSDMKNAVSKLDG 438
Query: 143 SEF 145
+E
Sbjct: 439 TEI 441
>gi|209876590|ref|XP_002139737.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555343|gb|EEA05388.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 377
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVE----LAHGGRRH 59
G I ++LK + F+E+E+ AE A R DG F G R+ V+ L
Sbjct: 33 GTISKLELKQ-----RFCFIEYEEESQAEAAHRELDGVEFGGQRIAVQPHDPLVRTKDVE 87
Query: 60 SSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
+++ +Y+ RG R+ YRV V L +ASW+DLKD+ R+ G+V +S VF +G
Sbjct: 88 NTNKPQYNRPLPSDGRGPPRKH-YRVCVFNLDENASWRDLKDYGRQIGEVNYSAVFHYQG 146
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYS-------RSP--- 169
G+V+Y + ++MK A+ ++ F R+ V + D + + RSP
Sbjct: 147 QKVGVVEYLTVEEMKRALEEIPNLPFLGKTIRAEEDVGQLDRELAAANGYGIKRRSPPSY 206
Query: 170 SRSPYYSRSRSRSP----YYSRSRSP 191
S PY R RSR P Y RSRSP
Sbjct: 207 SSGPYGGRPRSRYPSPPRYRQRSRSP 232
>gi|116202487|ref|XP_001227055.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
gi|88177646|gb|EAQ85114.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
Length = 324
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 17/152 (11%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + DG +F G RL V+ A G R
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVP--DGSDFMGERLTVQFARGSRHREQGG 85
Query: 64 DR------YSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFR 116
Y+ + R RR+ +R+ ++GLP+ SWQDLKD R++G DV +S+ R
Sbjct: 86 GGGGGGGGYNHDRNSAPR--PRRTPHRMQISGLPNDTSWQDLKDFARQSGLDVVYSETNR 143
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 148
+ G G V++ + D++ A+ KLD EF+NA
Sbjct: 144 N-GSNEGFVEFETAADLRSAVEKLDNREFKNA 174
>gi|53130660|emb|CAG31659.1| hypothetical protein RCJMB04_9e4 [Gallus gallus]
Length = 165
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 76/134 (56%), Gaps = 8/134 (5%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I LK G+ F+EFED+RDA+DAI +G R+ +E A R
Sbjct: 27 YGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGKELCDERVTIEHARARRGRGRF 81
Query: 63 MDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
R+S YS GS G R+++R++V L S SWQDLKD MR+AG+V + R+
Sbjct: 82 AQRFSYYSQSGSSRYGPPVRTEHRIIVENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRN 141
Query: 121 MTGIVDYTSYDDMK 134
G+V++ SY D++
Sbjct: 142 -EGVVEFASYSDIE 154
>gi|89267363|emb|CAJ82789.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 234
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 83/155 (53%), Gaps = 21/155 (13%)
Query: 6 IVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM-- 63
I +I+LK G+ F+EF+D+RDA+DA+ +G R+ +E A R M
Sbjct: 2 IREINLK-----NGFGFVEFDDHRDADDAVYELNGKVLCNERVTIEHARNRRGRGGMMGG 56
Query: 64 ---------DRYS---SYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
+R++ S S G SR G R+++R++V L S SWQDLKD MR+AG+V
Sbjct: 57 GGGGGGRYPNRFAYRQSNSGGPSRYGPPVRTEHRIIVENLSSRVSWQDLKDFMRKAGEVT 116
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ R G+V++ SY DMK A+ KLD E
Sbjct: 117 YVDAHRSNRN-EGVVEFASYTDMKNALDKLDGVEL 150
>gi|221485545|gb|EEE23826.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 351
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYR----LRVELAHGGRR 58
+G I+ ++ K GY FLE+ D RDA DAI G G R LRVE+
Sbjct: 38 FGKIIKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGRPPPGMRGAAPLRVEIPLA--- 94
Query: 59 HSSSMDRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
SS D + + RG++ RR + + V GLP S SWQDLKDH R GDV F++V +D
Sbjct: 95 RSSRPDGFGEEAL--PRGLAGRRGRFVLEVRGLPPSGSWQDLKDHFRGIGDVGFAEVRKD 152
Query: 118 RGG---MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
+ G V + S DM AI LD S FR + +S + VRE
Sbjct: 153 PDAPDSVMGKVSFFSKRDMMEAIEVLDGSTFRSHEGEKSRISVRE 197
>gi|313227405|emb|CBY22552.1| unnamed protein product [Oikopleura dioica]
Length = 318
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 87/202 (43%), Gaps = 51/202 (25%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR---- 58
YG IVDI +K YAF+EFED RDA DA++ D +G R+R+E++ G +
Sbjct: 29 YGRIVDISIKTK-----YAFVEFEDERDAADAVKDLDDQKLNGSRVRLEVSKGCKDKYRD 83
Query: 59 -HSSSMDRYSSYSSGGS-----------------------RGVSRRSDY----------- 83
+ RY SYS S RG RR +
Sbjct: 84 FQRTGRVRYRSYSKSVSPGRRRHRSRSPVGKGRSRSRSPARGSDRRETFYSKPAYKKYGA 143
Query: 84 ------RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF-RDRGGMTGIVDYTSYDDMKYA 136
V V L S SWQDLKD MR+AG+V + D G G+V Y DD K A
Sbjct: 144 PEKTRWTVEVDNLSSRCSWQDLKDFMRKAGEVTYGDAHGSDIGRNRGVVCYEREDDAKRA 203
Query: 137 IRKLDRSEFRNAFSRSYVRVRE 158
I +LD EF + +VRE
Sbjct: 204 IEELDGREFNGRDVKLAFKVRE 225
>gi|119614896|gb|EAW94490.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_e [Homo sapiens]
Length = 142
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRG 98
Query: 63 MDRYSSYSSGGSRGV--SRRSDYRVLVTGLPSSASWQDL 99
+ R SRRS+ RV+V+GLP S SWQDL
Sbjct: 99 GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
>gi|237844047|ref|XP_002371321.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211968985|gb|EEB04181.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|221506395|gb|EEE32030.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 351
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYR----LRVELAHGGRR 58
+G I+ ++ K GY FLE+ D RDA DAI G G R LRVE+
Sbjct: 38 FGKIIKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGRPPPGMRGAAPLRVEIPLA--- 94
Query: 59 HSSSMDRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
SS D + + RG++ RR + + V GLP S SWQDLKDH R GDV F++V +D
Sbjct: 95 RSSRPDGFGEEAL--PRGLAGRRGRFVLEVRGLPPSGSWQDLKDHFRGIGDVGFAEVRKD 152
Query: 118 RGG---MTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 158
+ G V + S DM AI LD S FR + +S + VRE
Sbjct: 153 PDAPDSVMGKVSFFSKRDMMEAIEVLDGSTFRSHEGEKSRISVRE 197
>gi|346977018|gb|EGY20470.1| pre-mRNA splicing factor [Verticillium dahliae VdLs.17]
Length = 322
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 106/223 (47%), Gaps = 30/223 (13%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH---S 60
G I +I L G+ F+E++D DA D + DG +F G RL V+ A G R +
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVP--DGSDFMGERLTVQFARGTRHRDGGA 85
Query: 61 SSMDRYSSYSSGGSRGVSR--RSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRD 117
+ ++ ++ R R R+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD
Sbjct: 86 APGGFNNNNNTHNERAAPRPRRTQHRMQITGLPTDTSWQDLKDFARQSSLDVVYSETGRD 145
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSR 177
G G V++ + D++ A+ KLD EF+ + P P +R
Sbjct: 146 -GNGRGFVEFETAADLRTAVEKLDGREFKGKPVNCVADTQ-----------PDIPPRDNR 193
Query: 178 SRSRSPYYSRSRSPSRSWSYSPRS--RSYSPRG---KYSRRSP 215
RSRSP R P Y R R YSPRG Y RSP
Sbjct: 194 GRSRSPNGRRPPPPPPVDDYDRRGPPRGYSPRGYRDGYRDRSP 236
>gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 78/154 (50%), Gaps = 17/154 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA--------- 53
YG I +I+LK G+ F+EF+D+RDA+DA+ +G R+ +E A
Sbjct: 27 YGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGKELCSERVTIEHARSRRGRGGG 81
Query: 54 --HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
G S SSG G R+++R++V L S SWQDLKD MR+AG+V F
Sbjct: 82 PGMGRFGGGGGGGYRPSRSSGPRYGPPVRTEHRLIVENLSSRISWQDLKDMMRKAGEVTF 141
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R G+V++ S DMK AI K D +E
Sbjct: 142 VDAHRPNKN-EGVVEFASRSDMKSAISKFDGTEL 174
>gi|46134285|ref|XP_389458.1| hypothetical protein FG09282.1 [Gibberella zeae PH-1]
Length = 330
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 10/169 (5%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 78
G+ F+E++D DA D + G +F G RL V+ A G R + ++ R
Sbjct: 43 GFGFIEYKDPMDARDVVPAFHGSDFMGERLTVQFARGSRHREGG--NFGNHERTAPR--P 98
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 137
RR+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+
Sbjct: 99 RRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGR-GFVEFETAADLRTAV 157
Query: 138 RKLDRSEF---RNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSP 183
KLD EF R SR+ + V D R +P+ P+ + P
Sbjct: 158 EKLDGREFKGQRVQLSRTCLPVSVAD-RALLDDAPTLLPWTITTAVALP 205
>gi|358398894|gb|EHK48245.1| hypothetical protein TRIATDRAFT_298403 [Trichoderma atroviride IMI
206040]
Length = 312
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 33/213 (15%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I ++ L G+ F+E++D DA D + G +F G RL V+ A G R M
Sbjct: 33 GEITEVKLMN-----GFGFIEYKDAMDARDVVPAFHGSDFMGERLTVQFARGARHREGGM 87
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ RR+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD G
Sbjct: 88 GHERAPPR------PRRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGR- 140
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR-EYDSR--RSYSRSPSRSPY----- 174
G V++ + D++ A+ KLD EF+ A + V + + R R+ SRSP R PY
Sbjct: 141 GFVEFETAADLRTAVEKLDGREFKGARVQCLVDTQPDMPPRDPRARSRSPGRRPYPPPQF 200
Query: 175 ------------YSRSRSRSPYYSRSRSPSRSW 195
Y+R + Y R RSP R +
Sbjct: 201 DNYDRRGGPHRGYNREGAAPSYGYRDRSPRREY 233
>gi|156402923|ref|XP_001639839.1| predicted protein [Nematostella vectensis]
gi|156226970|gb|EDO47776.1| predicted protein [Nematostella vectensis]
Length = 185
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 27/154 (17%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH-------- 54
+G I DI+LK G+AF+EF+D RDA+DA+ + G R+ VE AH
Sbjct: 29 FGRINDINLK-----QGFAFVEFDDARDADDAVYELNHKELLGERVSVEHAHPSRGGGGG 83
Query: 55 ---GGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
G R S DRY Y++ +YR++V L + A WQDLKD+MR+AG+V F
Sbjct: 84 GGRGFRDRSPRRDRYPPYNT----------EYRLIVENLSTRAGWQDLKDYMRQAGEVTF 133
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+Q +DR G G+ D+++ DM YA++KLD +E
Sbjct: 134 TQCHKDRVG-EGVCDFSNESDMLYALKKLDGTEL 166
>gi|328849877|gb|EGF99050.1| hypothetical protein MELLADRAFT_79554 [Melampsora larici-populina
98AG31]
Length = 259
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG ++D+ + G+ FLE++ RDAEDA+ +G F G RL VE A R
Sbjct: 29 YGTLLDVRIM-----AGFGFLEYDQVRDAEDAVHDLNGREFMGDRLIVEFAKAPRGGREM 83
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
S GG G R +R++V G+ SWQDLKD R+AG+V + V R+ G
Sbjct: 84 YGGGGGGSYGGGGGPRRSG-FRLIVKGISHETSWQDLKDFARQAGNVIRADVDRNMPG-E 141
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPS 170
G+++Y+S DD A+RKLD ++ + + R RR SRSPS
Sbjct: 142 GLIEYSSQDDADNALRKLDGTDLKGMVV-TLFEDRPGGGRRDRSRSPS 188
>gi|340516476|gb|EGR46724.1| predicted protein [Trichoderma reesei QM6a]
Length = 311
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 105/211 (49%), Gaps = 31/211 (14%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I ++ L G+ F+E++D DA D + G +F G RL V+ A G R M
Sbjct: 33 GEITEVKLMN-----GFGFIEYKDAMDARDVVPAFHGSDFMGERLTVQFARGTRHREGGM 87
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ RR+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD G
Sbjct: 88 GHERAPPR------PRRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNG-R 140
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR-EYDSR-RSYSRSPSRSPY------ 174
G V++ + D++ AI KLD EF+ + + V ++ + R R+ SRSP R PY
Sbjct: 141 GFVEFETAADLRTAIEKLDGREFKGSRVQCIVDLQPDMPPRDRARSRSPGRRPYPPPAFD 200
Query: 175 -YSR--------SRSRSPYYS-RSRSPSRSW 195
Y R SR P YS R RSP R +
Sbjct: 201 NYDRRGGPHRGYSREAPPAYSYRDRSPRREY 231
>gi|408390763|gb|EKJ70150.1| hypothetical protein FPSE_09676 [Fusarium pseudograminearum CS3096]
Length = 312
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 11/144 (7%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I ++ L G+ F+E++D DA D + G +F G RL V+ A G R
Sbjct: 33 GEITEVKLMN-----GFGFIEYKDPMDARDVVPAFHGSDFMGERLTVQFARGSRHREGG- 86
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ ++ R RR+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD G
Sbjct: 87 -NFGNHERTAPR--PRRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGR- 142
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
G V++ + D++ A+ KLD EF+
Sbjct: 143 GFVEFETAADLRTAVEKLDGREFK 166
>gi|198421230|ref|XP_002126938.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 2 [Ciona intestinalis]
Length = 280
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 83/156 (53%), Gaps = 20/156 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR---- 58
YG I D+ LK G+ F+ F+D RDA+DAI +G + G R+ +E+A G R
Sbjct: 28 YGKINDLMLK-----NGFGFVIFDDERDADDAIHDLNGKSLCGERVMLEIAKGTPRGPGG 82
Query: 59 ---------HSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 109
SSS ++G+ YR++V L S +WQDLKD+MR+ G+V
Sbjct: 83 DRRESSSRRSSSSSYYQQQQPRSSTKGIPNHG-YRLIVENLSSRVTWQDLKDYMRQCGEV 141
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ R R G+V+++S +MKYAI KL+ +E
Sbjct: 142 VYADANRYRRN-EGVVEFSSRKEMKYAIEKLNGTEI 176
>gi|440637919|gb|ELR07838.1| hypothetical protein GMDG_00459 [Geomyces destructans 20631-21]
Length = 296
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 12/146 (8%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E+ED DA D + G G RL V+ A G R+
Sbjct: 33 GTIKEIKLMN-----GFGFIEYEDAMDARDVVPAFHGSELKGDRLTVQFARGSRQR---- 83
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
D +++ R RR+ +R+ ++GL SWQDLKD R++ DV +S+ RDR G
Sbjct: 84 DNFAATDRTAPR--PRRTPHRMQISGLSGETSWQDLKDFARQSSLDVVYSETGRDRDGKG 141
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNA 148
V++ + D++ A+ KLD EF+ A
Sbjct: 142 SFVEFETAADLRTAVEKLDGREFKGA 167
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 81/152 (53%), Gaps = 17/152 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + ++ LK GY F+EFED+RDA+DA++ DG + +G R+RVE A R +S
Sbjct: 29 YGKLREVALK-----NGYGFVEFEDHRDADDAVQDLDGKDMNGSRVRVEFARSPREKRNS 83
Query: 63 MDRYSSYSSGGSRGV---------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 113
RY S S RR+ YR+ V L + SWQDLKD+ R G++ ++
Sbjct: 84 --RYQSRRSPPRGRRGPPMKRNPPGRRTQYRIRVENLSTRTSWQDLKDYFRSCGEITYTN 141
Query: 114 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ R G+V++ M+ A+ +LD ++
Sbjct: 142 AHKPRNN-EGVVEFGDKRAMENALDRLDDTDL 172
>gi|327284522|ref|XP_003226986.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 195
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR----R 58
YG IV++DLK GY FLEF D DA+DA+ +G + G + VE G R
Sbjct: 24 YGKIVEVDLK-----NGYGFLEFGDVCDADDAVHELNGKDLCGDHVIVEHTWGPRCDSSY 78
Query: 59 HSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
S S G ++YR++ L +WQDLKD+M +AG+V ++ R
Sbjct: 79 SSGRSGYGYRRSGRDKNGPPTHTEYRLIDENLTGCCNWQDLKDYMHQAGEVTYADAHNGR 138
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEFR 146
G++++ SY DMK A+ LD +E
Sbjct: 139 KN-EGVIEFKSYSDMKRALENLDGTEVN 165
>gi|336367304|gb|EGN95649.1| hypothetical protein SERLA73DRAFT_186792 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380022|gb|EGO21176.1| hypothetical protein SERLADRAFT_441550 [Serpula lacrymans var.
lacrymans S7.9]
Length = 324
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 72/133 (54%), Gaps = 12/133 (9%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGV- 77
G+ F+EFE+ +DAEDA+ +G F G + VE A S R Y GG RG
Sbjct: 55 GFGFVEFENSKDAEDAVHHFNGKPFMGVNIVVEFA------KESRPRRDVYEGGGERGFG 108
Query: 78 ---SRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDM 133
SRR R++V+G+ SWQDLKD R AG V F+ + RD G GI++Y S DD
Sbjct: 109 SARSRRPPGIRLIVSGISRDTSWQDLKDFGREAGSVSFADIDRDFPGQ-GILEYLSRDDA 167
Query: 134 KYAIRKLDRSEFR 146
A++ LD + R
Sbjct: 168 DRAVKDLDGKDLR 180
>gi|342876767|gb|EGU78325.1| hypothetical protein FOXB_11186 [Fusarium oxysporum Fo5176]
Length = 1835
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 12/144 (8%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I ++ L G+ F+E++D DA D + G +F G RL V+ A G R
Sbjct: 1558 GEITEVKLM-----NGFGFIEYKDPMDARDVVPAFHGSDFMGERLTVQFARGSRHREGG- 1611
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ ++ R RR+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD G
Sbjct: 1612 --FGNHERTAPR--PRRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNG-R 1666
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
G V++ + D++ A+ KLD EF+
Sbjct: 1667 GFVEFETAADLRTAVEKLDGREFK 1690
>gi|451847680|gb|EMD60987.1| hypothetical protein COCSADRAFT_163394 [Cochliobolus sativus
ND90Pr]
Length = 340
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 79/144 (54%), Gaps = 12/144 (8%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G +F G RL V+ A G R + +
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSDFMGERLIVQFARGSRARNENF 87
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ RR+ YR+ + LP SWQDLKD R++G DV +S+V R+R G T
Sbjct: 88 TPHERVPP-----RPRRTPYRMRIANLPVETSWQDLKDFARQSGLDVVYSEVGRERDG-T 141
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
G V+Y + D+K A+ KLDR EF+
Sbjct: 142 GFVEYETAADLKTAVEKLDRREFK 165
>gi|449502419|ref|XP_004174507.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Taeniopygia guttata]
Length = 265
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRL---RVELAHGGRRH 59
YG I DIDLK G+ F+EFED RDA+DA+ Y DG L RV + H R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----YELDGKELCSERVTIEHARARS 76
Query: 60 SSSMDRY-------SSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S R++ R++V L S SWQDLKD MR+AG+V F+
Sbjct: 77 RGRGRGRYSDRFSSRRPRSDRRNAPPLRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFA 136
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R + G+V++ SY D+K AI KL E
Sbjct: 137 DAHRPKLN-EGVVEFASYSDLKNAIEKLSGKEI 168
>gi|224051266|ref|XP_002200500.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Taeniopygia guttata]
Length = 264
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRL---RVELAHGGRRH 59
YG I DIDLK G+ F+EFED RDA+DA+ Y DG L RV + H R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----YELDGKELCSERVTIEHARARS 76
Query: 60 SSSMDRY-------SSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S R++ R++V L S SWQDLKD MR+AG+V F+
Sbjct: 77 RGRGRGRYSDRFSSRRPRSDRRNAPPLRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFA 136
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R + G+V++ SY D+K AI KL E
Sbjct: 137 DAHRPKLN-EGVVEFASYSDLKNAIEKLSGKEI 168
>gi|392567011|gb|EIW60186.1| hypothetical protein TRAVEDRAFT_27854 [Trametes versicolor
FP-101664 SS1]
Length = 288
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 77/144 (53%), Gaps = 12/144 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVD + G+ F+EFE RDAEDA++ +G NF G + VE A +
Sbjct: 26 YGRIVDCRVMT-----GFGFVEFESSRDAEDAMQNFNGKNFMGSNIVVEFAK------ET 74
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R Y + + R +RV+V+G+ SWQDLKD R AG V ++ + RD G
Sbjct: 75 RPRRDPYDADRAVRARRPPGFRVIVSGISRDTSWQDLKDFGREAGSVSYADIDRDNPG-E 133
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
GI++Y S +D + A++ LD + R
Sbjct: 134 GILEYLSREDSERAVKDLDGRDLR 157
>gi|330941512|ref|XP_003306066.1| hypothetical protein PTT_19086 [Pyrenophora teres f. teres 0-1]
gi|311316625|gb|EFQ85835.1| hypothetical protein PTT_19086 [Pyrenophora teres f. teres 0-1]
Length = 342
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 79/144 (54%), Gaps = 12/144 (8%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G +F G RL V+ A G R + +
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSDFMGERLIVQFARGSRARNENF 87
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ RR+ YR+ + LP SWQDLKD R++G DV +S+V R+R G T
Sbjct: 88 TPHERVPP-----RPRRTPYRMRIANLPVETSWQDLKDFARQSGLDVVYSEVGRERDG-T 141
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
G V+Y + D+K A+ KLDR EF+
Sbjct: 142 GFVEYETAADLKAAVEKLDRREFK 165
>gi|291224547|ref|XP_002732263.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 261
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 87/172 (50%), Gaps = 43/172 (25%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G + +++LK G+ F+EF+D RDA+DA+ +G + G R+ +E A G R
Sbjct: 26 FGHLREVNLK-----NGFGFVEFDDPRDADDAVYELNGKDLCGERVIIEHARGPVRR--- 77
Query: 63 MDRYSSYSSGGSRGVSR-----------------------------RSDYRVLVTGLPSS 93
DR SGG RG R R+D R++V L S
Sbjct: 78 -DR----DSGGYRGSERDYRGDRGGGYGPPRRRGGGGGIDKYGPPTRTDNRLIVENLSSR 132
Query: 94 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
SWQDLKD+MR+AG+V ++ ++ G+V++ +Y DMK A+ KLD +E
Sbjct: 133 CSWQDLKDYMRQAGEVTYADAHKEHKN-EGVVEFATYSDMKNAMSKLDGTEI 183
>gi|160333128|ref|NP_001026368.2| splicing factor, arginine/serine-rich 5 [Gallus gallus]
Length = 264
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 77/153 (50%), Gaps = 21/153 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRL---RVELAHGGRRH 59
YG I DIDLK G+ F+EFED RDA+DA+ Y DG L RV + H R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----YELDGKELCSERVTIEHARARS 76
Query: 60 SSSMDRYSSYSSGGSRGVSR-------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S R S R++ R++V L S SWQDLKD MR+AG+V F+
Sbjct: 77 RGRGRGRYSDRFSSRRPRSDRRSAPPLRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFA 136
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R + G+V++ SY D+K AI KL E
Sbjct: 137 DAHRPKLN-EGVVEFASYSDLKNAIEKLSGKEI 168
>gi|393216709|gb|EJD02199.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 270
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 16/146 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA--HGGRRHS 60
+GP+VD+ + G+ F+EFE RDAEDA+R G F G + VE A + GRR+
Sbjct: 26 FGPLVDVRVMT-----GFGFVEFESSRDAEDALRDIRGKPFLGSNIVVEFAKENRGRRND 80
Query: 61 SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
Y S R R + R+ V + SWQDLKD R AG V F+ + R+ G
Sbjct: 81 -----YEDRSFAPRR---RPAGIRISVDNISKDTSWQDLKDFGREAGSVSFADIDREVPG 132
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
GI++Y S DD + A+++LD E R
Sbjct: 133 R-GILEYASRDDAEQAVKELDGKELR 157
>gi|148687918|gb|EDL19865.1| splicing factor, arginine/serine rich 9, isoform CRA_a [Mus
musculus]
Length = 184
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
Query: 81 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 140
+ + + GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKL
Sbjct: 72 AHFPFMTPGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKL 128
Query: 141 DRSEFR-NAFSRSYVRV 156
D ++FR + SY+RV
Sbjct: 129 DDTKFRSHEGETSYIRV 145
>gi|451996756|gb|EMD89222.1| hypothetical protein COCHEDRAFT_1158038 [Cochliobolus
heterostrophus C5]
Length = 338
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 80/144 (55%), Gaps = 14/144 (9%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + DG +F G RL V+ A G R + +
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVP--DGSDFMGERLIVQFARGSRARNENF 85
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ RR+ YR+ + LP SWQDLKD R++G DV +S+V R+R G T
Sbjct: 86 TPHERVPP-----RPRRTPYRMRIANLPVETSWQDLKDFARQSGLDVVYSEVGRERDG-T 139
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
G V+Y + D+K A+ KLDR EF+
Sbjct: 140 GFVEYETAADLKTAVEKLDRREFK 163
>gi|223648456|gb|ACN10986.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 315
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 82/169 (48%), Gaps = 32/169 (18%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +++LK G+ F+EF+D+RDA+DA+ +G R+ +E A R
Sbjct: 27 YGRIREVNLK-----NGFGFVEFDDHRDADDAVYELNGKELCSERVTIEHARSRRGRGGG 81
Query: 63 MD---------------RYSSYSSGGSR-----------GVSRRSDYRVLVTGLPSSASW 96
R+SSY G G R+++R++V L S SW
Sbjct: 82 PGMGGGGGGGGGGRFSPRFSSYRQGSGGHGGGGGGSSRYGPPVRTEHRIIVENLSSRISW 141
Query: 97 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
QDLKD MR+AG+V F R G+V++ S+ DMK AI KLD ++
Sbjct: 142 QDLKDLMRKAGEVTFVDAHRTNKN-EGVVEFASHSDMKNAIDKLDGTDL 189
>gi|260819154|ref|XP_002604902.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
gi|229290231|gb|EEN60912.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
Length = 289
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 84/161 (52%), Gaps = 24/161 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK G+ F+EF+D RDA+DA+ +G G R+ VE A G R
Sbjct: 26 YGRIREINLK-----NGFGFVEFDDPRDADDAVYELNGKELCGERVIVENARGPARGGGG 80
Query: 63 ------------MDRYSSYSSGGSR------GVSRRSDYRVLVTGLPSSASWQDLKDHMR 104
+D G G R+DYR++V L S SWQDLKD+MR
Sbjct: 81 FRGGGYGYRPGWLDNGRGSGGGRGSDSRNRYGPPVRTDYRLIVENLSSRCSWQDLKDYMR 140
Query: 105 RAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+AG+V ++ + + GIV++ +Y DM+ A+RKLD +E
Sbjct: 141 QAGEVTYADAHK-QNKNEGIVEFATYRDMENALRKLDGTEI 180
>gi|171682128|ref|XP_001906007.1| hypothetical protein [Podospora anserina S mat+]
gi|170941023|emb|CAP66673.1| unnamed protein product [Podospora anserina S mat+]
Length = 319
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 112/235 (47%), Gaps = 32/235 (13%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + DG F G RL V+ A G R ++
Sbjct: 33 GDIAEIKLMN-----GFGFIEYKDPMDARDVVP--DGSTFLGERLTVQFARGNRHRENNG 85
Query: 64 DR------YSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFR 116
+++ S R RR+ +R+ ++GLP SWQDLKD R G DV +S+ R
Sbjct: 86 GGGGGGGGFNNDRSSAPR--PRRTPHRLQISGLPPDTSWQDLKDFARTPGLDVVYSETGR 143
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLDRSEFR----NAFSRSYVRVREYDSRRSYS--RSPS 170
+ G G V++ + D++ A+ KL+ +F+ + + + D RS S R P
Sbjct: 144 N-GSSEGFVEFETAADLRTAVEKLNERDFKGVRVTCTANTQADIPRGDRGRSMSPRRGPG 202
Query: 171 RSPYYSRSRSRSPYYSRSRSPSRSWSYSP--RSRSYSPRGKY--SRRSPSLSPAR 221
R Y R R P R+ SP R+ Y P R RS PR Y R P SP R
Sbjct: 203 RMNDYDR---RGP--PRAYSPHRNGDYRPDYRDRSPVPRRDYYEDRARPYRSPPR 252
>gi|189211717|ref|XP_001942187.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979386|gb|EDU46012.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 340
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 80/144 (55%), Gaps = 14/144 (9%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + DG +F G RL V+ A G R + +
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVP--DGSDFMGERLIVQFARGSRARNENF 85
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ RR+ YR+ + LP SWQDLKD R++G DV +S+V R+R G T
Sbjct: 86 TPHERVPP-----RPRRTPYRMRIANLPVETSWQDLKDFARQSGLDVVYSEVGRERDG-T 139
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
G V+Y + D+K A+ KLDR EF+
Sbjct: 140 GFVEYETAADLKAAVEKLDRREFK 163
>gi|256077392|ref|XP_002574989.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229591|emb|CCD75762.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 370
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 77/150 (51%), Gaps = 13/150 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA-------HG 55
YG + DI LK GY F+EF++ +DA+DA+ G + G RL VE A G
Sbjct: 25 YGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGRDLRGERLIVEHARLPPGTRGG 79
Query: 56 GRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
RR S G R++YRV+V L S SWQDLKD MR+AG+V ++
Sbjct: 80 SRRAGGGGGGGGGGSGRDRYGPPTRTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAH 139
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ GIV++ +Y DMK AI K D E
Sbjct: 140 KS-AKNDGIVEFAAYADMKEAIEKFDGYEL 168
>gi|448111013|ref|XP_004201740.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
gi|359464729|emb|CCE88434.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
Length = 281
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 28/150 (18%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
GPI D+ L G+AF+ FE DA+ A+ D FDG L++E A + +
Sbjct: 29 GPITDVQLM-----RGFAFVTFESEEDAKKAVETLDNSEFDGQPLQIEFAREKKEDT--- 80
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC--FSQVFR--DRG 119
R +RV VT LP +WQD KD +R ++ F++VFR D G
Sbjct: 81 ----------------RGQFRVKVTNLPDGTAWQDFKDFVRDKTELAPTFAKVFRNYDTG 124
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 149
+ G +++ S +++ A+ L+ SEF+ A
Sbjct: 125 EVIGALEFASAEELAQAVPLLNESEFQEAI 154
>gi|448096991|ref|XP_004198563.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
gi|359379985|emb|CCE82226.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
Length = 280
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 28/150 (18%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
GPI D+ L G+AF+ FE DA+ A+ D FDG L++E A + +
Sbjct: 29 GPITDVQLM-----RGFAFVTFESEEDAKKAVETLDNSEFDGQPLQIEFAREKKEDT--- 80
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC--FSQVFR--DRG 119
R +RV VT LP +WQD KD +R ++ F++VFR D G
Sbjct: 81 ----------------RGQFRVKVTNLPDGTAWQDFKDFVRDKTELAPTFAKVFRNYDTG 124
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAF 149
+ G +++ S +++ A+ L+ SEF+ A
Sbjct: 125 EVIGALEFASAEELAQAVPLLNESEFQEAI 154
>gi|209154606|gb|ACI33535.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 329
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 28/165 (16%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +++LK G+ F+EF+D RDA+DA+ +G R+ +E A R
Sbjct: 27 YGRIREVNLKN-----GFGFVEFDDPRDADDAVYELNGKELCSERVTIEHARSRRGRGGG 81
Query: 63 MD----------RYSSYSSGGSRGVSR------------RSDYRVLVTGLPSSASWQDLK 100
R+SSY G R+++R++V L S SWQDLK
Sbjct: 82 PGMGGGGGRFSPRFSSYRQGSGDRRGGGGGGSSRYGPPVRTEHRIIVENLSSRISWQDLK 141
Query: 101 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
D MR+ G+V F R G+V++ S+ DMK A+ KLD ++
Sbjct: 142 DLMRKVGEVTFVDAHRTNKN-EGVVEFASHSDMKNALDKLDGTDL 185
>gi|349604033|gb|AEP99695.1| Splicing factor, arginine/serine-rich 9-like protein, partial
[Equus caballus]
Length = 105
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%), Gaps = 4/69 (5%)
Query: 89 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 147
GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR +
Sbjct: 1 GLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSH 57
Query: 148 AFSRSYVRV 156
SY+RV
Sbjct: 58 EGETSYIRV 66
>gi|256077394|ref|XP_002574990.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229592|emb|CCD75763.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 371
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA--------H 54
YG + DI LK GY F+EF++ +DA+DA+ G + G RL VE A
Sbjct: 25 YGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGRDLRGERLIVEHARLPPGTRGG 79
Query: 55 GGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 114
R G R++YRV+V L S SWQDLKD MR+AG+V ++
Sbjct: 80 SRRAGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADA 139
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ GIV++ +Y DMK AI K D E
Sbjct: 140 HKS-AKNDGIVEFAAYADMKEAIEKFDGYEL 169
>gi|393912529|gb|EFO18201.2| Sfrs5 protein [Loa loa]
Length = 287
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGG---RRH 59
YG I DI LK G+ F+EF+D RDA+DA+ +G G R+ +E + G R
Sbjct: 29 YGRIRDIVLK-----NGFGFVEFDDPRDADDAVYELNGKELCGERVILEFSRRGPRSRMG 83
Query: 60 SSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
DR+ G +++ YR++V L S SWQDLKD MR AG+V F+ +
Sbjct: 84 FGGFDRFPPPRRESRYGPPQQTRYRLIVENLSSRCSWQDLKDIMRTAGEVTFADAHKQHP 143
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEF 145
GIV + + DD++ A+ KL E
Sbjct: 144 N-EGIVCFLTRDDLERALDKLQGKEV 168
>gi|449274700|gb|EMC83778.1| Splicing factor, arginine/serine-rich 5 [Columba livia]
Length = 265
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 77/153 (50%), Gaps = 21/153 (13%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRL---RVELAHGGRRH 59
YG I DIDLK G+ F+EF+D RDA+DA+ Y DG L RV + H R
Sbjct: 27 YGRIRDIDLK-----RGFGFVEFDDPRDADDAV-----YELDGKELCSERVTIEHARARS 76
Query: 60 SSSMDRYSSYSSGGSRGVSR-------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S R S R++ R++V L S SWQDLKD MR+AG+V F+
Sbjct: 77 RGRGRGRYSDRFSSRRPRSDRRSAPPLRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFA 136
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R + G+V++ SY D+K AI KL E
Sbjct: 137 DAHRPKLN-EGVVEFASYSDLKNAIEKLSGKEI 168
>gi|226467221|emb|CAX76091.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 74/154 (48%), Gaps = 17/154 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA--------- 53
YG + DI LK GY F+EF++ +DA+DA+ G + G RL VE A
Sbjct: 25 YGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGRDLRGERLIVEHARLPPGTRGG 79
Query: 54 --HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
G G R++YRV+V L S SWQDLKD MR+AG+V +
Sbjct: 80 SRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENLSSRVSWQDLKDLMRKAGEVTY 139
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ + GIV++ +Y DMK AI K D E
Sbjct: 140 ADAHKS-AKNDGIVEFAAYADMKEAIEKFDGYEL 172
>gi|226467219|emb|CAX76090.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 74/154 (48%), Gaps = 17/154 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA--------- 53
YG + DI LK GY F+EF++ +DA+DA+ G + G RL VE A
Sbjct: 25 YGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGRDLRGERLIVEHARLPPGTRGG 79
Query: 54 --HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
G G R++YRV+V L S SWQDLKD MR+AG+V +
Sbjct: 80 SRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENLSSRVSWQDLKDLMRKAGEVTY 139
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ + GIV++ +Y DMK AI K D E
Sbjct: 140 ADAHKS-AKNDGIVEFAAYADMKEAIEKFDGYEL 172
>gi|170087376|ref|XP_001874911.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650111|gb|EDR14352.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 297
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 12/147 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+D + G+ F+EFE+ +DAEDA+ +G F G + VE A R
Sbjct: 26 YGRIIDCRVMT-----GFGFVEFENAKDAEDAVHNFNGKPFMGVNIVVEFAKESRPRREV 80
Query: 63 MDRYSSYSSGGSRGVSRR---SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
Y + GG G R R++V+G+ SWQDLKD R AG V F+ + RD
Sbjct: 81 ---YDNDRGGGGHGAPRSRRPPGIRLIVSGVSRDTSWQDLKDFGRDAGSVSFADIDRDVP 137
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR 146
G G+++Y S +D A+++LD + R
Sbjct: 138 GQ-GVLEYLSREDADRAVKELDGKDLR 163
>gi|384498124|gb|EIE88615.1| hypothetical protein RO3G_13326 [Rhizopus delemar RA 99-880]
Length = 429
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 65/122 (53%), Gaps = 31/122 (25%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR 79
+ F+EF++ DA+DAI D + + SG SR
Sbjct: 220 FGFVEFDNKVDADDAIH---------------------------DLHGTKVSGSSR--EE 250
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
RS YRV++ LP +WQD+KD MR+AG V F+ V +D G G+V++ YDDMKYA+R+
Sbjct: 251 RS-YRVVIKNLPPRTTWQDVKDFMRKAGRVVFADVLKDCDG-EGVVEFAQYDDMKYALRE 308
Query: 140 LD 141
LD
Sbjct: 309 LD 310
>gi|226467223|emb|CAX76092.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 74/154 (48%), Gaps = 17/154 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA--------- 53
YG + DI LK GY F+EF++ +DA+DA+ G + G RL VE A
Sbjct: 25 YGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGRDLRGERLIVEHARLPPGTRGG 79
Query: 54 --HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
G G R++YRV+V L S SWQDLKD MR+AG+V +
Sbjct: 80 SRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENLSSRVSWQDLKDLMRKAGEVTY 139
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ + GIV++ +Y DMK AI K D E
Sbjct: 140 ADAHKS-AKNDGIVEFAAYADMKEAIEKFDGYEL 172
>gi|149390935|gb|ABR25485.1| pre mRNA splicing factor sf2 [Oryza sativa Indica Group]
Length = 154
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 39/42 (92%)
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 160
GG GIVDYT+YDDMKYAIRKLD SEF+NAFS++Y+RV+EYD
Sbjct: 2 GGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYD 43
>gi|403418011|emb|CCM04711.1| predicted protein [Fibroporia radiculosa]
Length = 328
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 12/144 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVD + G+ F+EFE RDA+DA+R +G F G + VE A S
Sbjct: 26 YGRIVDCRVMT-----GFGFVEFESSRDADDAVRDFNGKAFMGANIVVEFAK------ES 74
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R + + R +R++V+G+ SWQDLKD R AG V ++ + RD G
Sbjct: 75 RPRREVFEPERAPRARRPPGFRLVVSGISRDTSWQDLKDFGREAGSVSYADIDRDAAG-E 133
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
GI++Y S DD + A+++LD + R
Sbjct: 134 GILEYLSRDDAERAVKELDGKDLR 157
>gi|426374380|ref|XP_004054052.1| PREDICTED: serine/arginine-rich splicing factor 9 [Gorilla gorilla
gorilla]
Length = 115
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%), Gaps = 4/71 (5%)
Query: 87 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 146
GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+RKLD ++FR
Sbjct: 9 CLGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFR 65
Query: 147 -NAFSRSYVRV 156
+ SY+RV
Sbjct: 66 SHEGETSYIRV 76
>gi|389748594|gb|EIM89771.1| hypothetical protein STEHIDRAFT_128672 [Stereum hirsutum FP-91666
SS1]
Length = 276
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVD + G+ F+EFE RDAEDA+ +G F G L VE A S
Sbjct: 26 YGKIVDCRVMT-----GFGFVEFESSRDAEDALNHFNGKPFMGTNLVVEFAK------ES 74
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R Y R R R++V+G+ SWQDLKD R AG V F+ + RD G
Sbjct: 75 RPRRDPYDDRAPRA-RRPPGIRIIVSGISRDTSWQDLKDFGREAGSVSFADIERDVPGQ- 132
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G+++Y + +D + A++ LD + R VRV + R + S S Y R R
Sbjct: 133 GVLEYLAREDAERAVKDLDGKDLRG----QPVRVALSEDRGADSYSRRDDRYERRDRYER 188
Query: 183 PYYSRSRSPSRSWSYSPRSRSYSPRGKYS 211
P Y R SY RSRS PR Y
Sbjct: 189 PSYRDERP-----SYRGRSRSPPPRRHYD 212
>gi|298714075|emb|CBJ33838.1| similar to arginine/serine-rich splicing factor 7 [Ectocarpus
siliculosus]
Length = 249
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 74/146 (50%), Gaps = 21/146 (14%)
Query: 17 PPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR- 75
PPG+AF+ F D RDA DA+R DG + G RVE++H R GG
Sbjct: 42 PPGFAFVWFADDRDAGDAVREIDGKSIAGREWRVEVSHQRGRDRGPPGGGYGGGGGGGGY 101
Query: 76 ----------------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 119
G + R+ Y+V +TGLP W +LKD +R+AGDV ++ V
Sbjct: 102 GGGGGGGGGYGAPRVGGAAPRTGYKVRITGLPEGMRWSELKDFVRKAGDVTYADVR---- 157
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEF 145
G G+ ++++ DDM A+R+LD + F
Sbjct: 158 GDEGVAEFSNRDDMSRAVRELDDTYF 183
>gi|66360300|ref|XP_627232.1| splicing factor SRP40 like 2x RRM domains [Cryptosporidium parvum
Iowa II]
gi|46228840|gb|EAK89710.1| splicing factor SRP40 like 2x RRM domains [Cryptosporidium parvum
Iowa II]
Length = 416
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 22/205 (10%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVE----LAHGGRRHSSSMDRYSSYSSGGSR 75
+ F+E+ED AE A R DG F G + V+ + ++++ +Y+ R
Sbjct: 52 FCFIEYEDETQAEAAHRELDGVEFGGQVIAVQPHDPMVRNKETNAANKPQYNRPLPSDGR 111
Query: 76 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 135
G R+ +RV V L +ASW+DLKD+ R+ G+V +S VF +G G+V+Y + ++MK
Sbjct: 112 GPPRKH-FRVCVFNLDDNASWRDLKDYGRQIGEVNYSAVFHYQGQKVGVVEYLTVEEMKR 170
Query: 136 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYS-------RSP---SRSPYYSRSRSRSPYY 185
A+ ++ F R + + D + + RSP S PY + R+R Y
Sbjct: 171 ALEEIPNLPFLGKSIRVEEDIGQLDRELAAANGYGAKRRSPPPFSSGPYNTGGRARGRYP 230
Query: 186 S------RSRSPSRSWSYSPRSRSY 204
S RSRSP R Y R RS+
Sbjct: 231 SPSRFRMRSRSPRRD-PYDRRERSH 254
>gi|428186342|gb|EKX55192.1| hypothetical protein GUITHDRAFT_160399 [Guillardia theta CCMP2712]
Length = 321
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Query: 16 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG-GRRHSSSMDRYSSYSSGGS 74
+ GY F++FE DAEDAI DGY +G +LRV+ HG + DR GS
Sbjct: 2 KSAGYGFVKFEKSSDAEDAISQYDGYELEGNKLRVQ--HGRSQAGRRGDDRGGYDGGQGS 59
Query: 75 RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMK 134
RG RV V G+ SWQDLKD R+AG+ ++ D G G+++Y + +D
Sbjct: 60 RGPRPTGQNRVYVDGIDEKTSWQDLKDFARKAGNPAYTDTVMDSKGKYGVIEYRTAEDCY 119
Query: 135 YAIRKLDRSEFRNAFSRSY 153
A R LD + + R Y
Sbjct: 120 SACRMLDGTMIGSCKVRVY 138
>gi|426328680|ref|XP_004025378.1| PREDICTED: uncharacterized protein LOC101134512, partial [Gorilla
gorilla gorilla]
Length = 434
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 30/143 (20%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 23 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGS- 76
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
Y S S S+G+ L D+MR+AG+V ++ + R
Sbjct: 77 ---YGSGRSKHSKGIL--------------------LSDYMRQAGEVTYADAHKGRKN-E 112
Query: 123 GIVDYTSYDDMKYAIRKLDRSEF 145
G++++ SY DMK A+ KLD +E
Sbjct: 113 GVIEFVSYSDMKRALEKLDGTEV 135
>gi|157133042|ref|XP_001662753.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108870967|gb|EAT35192.1| AAEL012621-PA [Aedes aegypti]
Length = 342
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 80/163 (49%), Gaps = 26/163 (15%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDA-IRGRDGYNFDGYRLRVELAHGGRRHSS 61
YG DI +K GY F+EFEDYRDA+DA + + YR+ VE A G R
Sbjct: 27 YGRTRDILIK-----NGYGFVEFEDYRDADDAPTQTHYIFLLLIYRVTVEPARGTARGGG 81
Query: 62 SMDRYSSYSSGGSR-------------------GVSRRSDYRVLVTGLPSSASWQDLKDH 102
S + Y R G R++YR+ V L S SWQDLKD+
Sbjct: 82 SRRDHDRYDRYDRRGGGGRYDKNRSNSRNSSRYGPPLRTEYRLTVENLSSRVSWQDLKDY 141
Query: 103 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
MR+AG+V ++ + R G+V++ + DMK AI KLD +E
Sbjct: 142 MRQAGEVTYADAHKQRKN-EGVVEFATSSDMKTAIDKLDDTEL 183
>gi|390597697|gb|EIN07096.1| hypothetical protein PUNSTDRAFT_71302 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 282
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVD + G+ F+EFE RDAEDA+ +G F+G + +E A S
Sbjct: 27 YGHIVDCRVMT-----GFGFVEFESTRDAEDALNHFNGKPFNGANIVIEFA------KES 75
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R Y + R R R++V+G+ SWQDLKD R AG+V ++ + RD G
Sbjct: 76 RPRRDVYEADRPR-ARRPPGIRLIVSGVSRDTSWQDLKDFGREAGNVSYADIDRDHPG-E 133
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
GI++Y + +D A+R+LD + R
Sbjct: 134 GILEYLTREDADRAVRELDGKDLR 157
>gi|315055555|ref|XP_003177152.1| hypothetical protein MGYG_01236 [Arthroderma gypseum CBS 118893]
gi|311338998|gb|EFQ98200.1| hypothetical protein MGYG_01236 [Arthroderma gypseum CBS 118893]
Length = 371
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 89/177 (50%), Gaps = 17/177 (9%)
Query: 40 GYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDL 99
G +F G RL V+ A G RR + + RR+ YR+ +TGLP + SWQDL
Sbjct: 131 GTDFKGERLTVQFARGPRRREP----FPGPPERSAAPRPRRTIYRMQITGLPET-SWQDL 185
Query: 100 KDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 158
KD R++G DV +S+ RDR G G V++ + +D++ A+ KLD ++F+ + ++
Sbjct: 186 KDFARQSGLDVVYSET-RDRDG-KGFVEFENGNDLRTAVEKLDGTDFKGSRVTCTADIQP 243
Query: 159 YDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSP 215
R R PY SRS R P Y P + R YSPRG Y RSP
Sbjct: 244 PMEDRV-----PRDPYRSRSPRRGPPYP----PVDDYDRRGPPRGYSPRGHYRERSP 291
>gi|226472962|emb|CAX71167.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 161
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 4/64 (6%)
Query: 96 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYV 154
WQDLKDHMR AGDV ++ VFRD TG+V++ Y+DMKYAIR+LD S+FR + SY+
Sbjct: 68 WQDLKDHMREAGDVGYADVFRDG---TGVVEFLRYEDMKYAIRRLDDSKFRSHEGESSYI 124
Query: 155 RVRE 158
RVRE
Sbjct: 125 RVRE 128
>gi|348515953|ref|XP_003445504.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oreochromis niloticus]
Length = 295
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 77/160 (48%), Gaps = 23/160 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK G+ F+EF+D+RDA+DA+ +G R+ +E A R
Sbjct: 27 YGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGKELCSERVTIEHARSRRGRGGG 81
Query: 63 MDRYSSYSSGGSRGVSR-----------------RSDYRVLVTGLPSSASWQDLKDHMRR 105
GG G R+D+R++V L S SWQDLKD MR+
Sbjct: 82 PGMGRFGGGGGGGGGGGGYRQSRSSGSSRYGPPVRTDHRLVVENLSSRTSWQDLKDLMRK 141
Query: 106 AGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
AG+V F R G+V++ S DMK AI KLD +E
Sbjct: 142 AGEVTFVDAHRPTKN-EGVVEFASRSDMKNAISKLDGTEL 180
>gi|410897813|ref|XP_003962393.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Takifugu
rubripes]
Length = 288
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I +I+LK G+ F+EF+D+RDA+DA+ +G R+ +E A R
Sbjct: 27 YGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGKELCSERVTIEHARSRRGRGGG 81
Query: 63 MDRYSSYSSGGSRGVSR-----------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
GG G R+++R++V L S SWQDLKD MR+AG+V F
Sbjct: 82 PGMGRFGGGGGGGGGGGGGGGYRYGPPVRTEHRLIVENLSSRISWQDLKDMMRKAGEVTF 141
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R G+V++ S DMK AI K D +E
Sbjct: 142 VDAHRPNKN-EGVVEFASRSDMKSAISKFDGTEL 174
>gi|156402467|ref|XP_001639612.1| predicted protein [Nematostella vectensis]
gi|156226741|gb|EDO47549.1| predicted protein [Nematostella vectensis]
Length = 174
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR--- 75
GY F+EF+ DAEDA+ +G G R+ VE A G +S YSS G +R
Sbjct: 39 GYGFVEFDYSDDAEDAVYECNGKKMLGERILVEPARG-----TSKGGYSSGRRGRARDKY 93
Query: 76 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 135
G R+ +R+ V L S SWQDLKD+ R+ GDV + + + G G++++ + D+K
Sbjct: 94 GPPLRTPWRMTVENLSSRVSWQDLKDYCRQIGDVTYGDAHKQKQG-EGVIEFATKKDLKK 152
Query: 136 AIRKLDRSEFR 146
A+RKLD E +
Sbjct: 153 ALRKLDGKELK 163
>gi|226467225|emb|CAX76093.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 17/154 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA--------- 53
YG + DI LK GY F+EF++ +DA+DA+ G + G RL VE A
Sbjct: 25 YGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGRDLRGERLIVEHARLPPGTRGG 79
Query: 54 --HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCF 111
G G R++YRV+V L S SWQ+LKD MR+AG+V +
Sbjct: 80 SRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENLSSRVSWQELKDLMRKAGEVTY 139
Query: 112 SQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ + GIV++ +Y DMK AI K D E
Sbjct: 140 ADAHKS-AKNDGIVEFAAYADMKEAIEKFDGYEL 172
>gi|380482542|emb|CCF41176.1| pre-mRNA splicing factor [Colletotrichum higginsianum]
Length = 312
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + DG +F G RL V+ A G R
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVP--DGSDFMGERLTVQFARGTRHREGGS 85
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ +++ + RR+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD G
Sbjct: 86 --AAGFNNERAPPRPRRTPHRMQITGLPTDTSWQDLKDFARQSSLDVVYSETGRD-GNGR 142
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 182
G V++ + D++ A+ KLD EF+ + + R + SRSP R
Sbjct: 143 GFVEFETAADLRTAVEKLDGREFKGSRVTCVADTQPDMPPRDLRGARSRSPGGGRRPYPP 202
Query: 183 PY--YSRSRSPSRSWSYSPRSRSYSPRGKYSRRSP 215
P Y R R P R YSPR Y R Y RSP
Sbjct: 203 PVDDYER-RGPPR--GYSPRRDGY--REGYRERSP 232
>gi|226471686|emb|CAX70924.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 371
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA--------- 53
YG + DI LK GY F+EF++ +DA+DA+ G + G RL VE A
Sbjct: 25 YGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGRDLRGERLIVEHARLPPGTRGG 79
Query: 54 -HGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
S G R++YRV+V L S SWQDLKD R+AG+V ++
Sbjct: 80 SRRAGGGGGGGGGGGGGSGRDRYGPPTRTEYRVIVENLSSRVSWQDLKDLTRKAGEVTYA 139
Query: 113 QVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+ GIV++ +Y DMK AI K D E
Sbjct: 140 DAHKS-AKNDGIVEFAAYADMKEAIEKFDGYEL 171
>gi|225709420|gb|ACO10556.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 244
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 78
GY F+EF+D RDA+D + DG +F G R+RVE+A R
Sbjct: 39 GYGFVEFDDPRDADDVVNDMDGKDFQGGRIRVEMARDPRDRRDRDRGSDRRGGFDRGRDR 98
Query: 79 R---------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTS 129
+++YRV+V L S SWQDLKD+ R AGD+ ++ R G GIV++ S
Sbjct: 99 GGRRGNPPGPKTNYRVVVENLSSRTSWQDLKDYFRAAGDITYTNAHTPRQG-EGIVEFAS 157
Query: 130 YDDMKYAIRKLDRSEF 145
+ YA+ + E
Sbjct: 158 SKGLDYALDHQNELEL 173
>gi|198432071|ref|XP_002131223.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 277
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R+ YRV+V L S SWQDLKD++R+AGDV F++ + GIVD+ +YDDMK AI K
Sbjct: 151 RTKYRVIVENLSSRVSWQDLKDYLRQAGDVSFAEAHQSVQN-EGIVDFATYDDMKAAIEK 209
Query: 140 LDRSEF 145
LD +E
Sbjct: 210 LDDTEL 215
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
+G I ++ LK GY F+EFE+ RDAEDA+ + + G R+ VE A G
Sbjct: 42 FGRIREVKLK-----TGYGFVEFEENRDAEDAVYEMNNQSLCGERVTVEHAKG 89
>gi|19115482|ref|NP_594570.1| mRNA export factor Srp2 [Schizosaccharomyces pombe 972h-]
gi|26399937|sp|P78814.2|SRP2_SCHPO RecName: Full=Pre-mRNA-splicing factor srp2
gi|2749972|gb|AAC39357.1| putative pre-mRNA splicing factor [Schizosaccharomyces pombe]
gi|6013092|emb|CAB57400.1| mRNA export factor Srp2 [Schizosaccharomyces pombe]
Length = 365
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+D L G+ F+E ED RDA D + G F G R+ VE A
Sbjct: 27 YGQILDCKLMN-----GFGFVEVEDARDARDIVNDFQGKEFMGSRIVVEPAR----GERR 77
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
S+ RR+ +R++V L SWQDLKD MR+AG+ F+ R+ G
Sbjct: 78 RRENFRESAASKYPRPRRTGFRLIVENLSEDVSWQDLKDVMRKAGEPTFTDAHRENPG-A 136
Query: 123 GIVDYTSYDDMKYAIRKLD 141
G+V++++ +DM+ A+ L+
Sbjct: 137 GVVEFSTEEDMRNALTSLN 155
>gi|393245625|gb|EJD53135.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 265
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG IVD + G+ F+EFE +DAE+ ++ +G F G + VE A R
Sbjct: 26 YGRIVDCRVMT-----GFGFVEFESSKDAEEVVQVFNGKAFMGAPILVEFAKENRPRRDD 80
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
Y + R R R++V+G+ SWQDLKD R AG++ F+ + RD G
Sbjct: 81 DRGYGGGGAYPPRA-RRPPGVRLIVSGISRDTSWQDLKDFGREAGNITFADIDRDVPGQ- 138
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
G+++Y S DD +A++ LD + R
Sbjct: 139 GVLEYMSRDDADHAVKTLDGKDLR 162
>gi|146414105|ref|XP_001483023.1| hypothetical protein PGUG_04978 [Meyerozyma guilliermondii ATCC
6260]
Length = 251
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 78
GYAF+ FE+ D A+ +G FDG L+VE A R
Sbjct: 3 GYAFVTFENSEDTAKAVETMNGTEFDGQTLQVEFAK-------------------ERKED 43
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDV--CFSQVFRD--RGGMTGIVDYTSYDDMK 134
R +RV VT LP +WQD KD +R ++ F++VFRD G + G +++ S +++
Sbjct: 44 TRGQFRVKVTNLPDGTAWQDFKDFVRDKTELTPTFAKVFRDYESGEVIGALEFGSREELD 103
Query: 135 YAIRKLDRSEFRNA 148
A+ LD++EF++
Sbjct: 104 KAVPLLDKAEFQDV 117
>gi|449273171|gb|EMC82779.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 417
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 39 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSA 94
+G + G R+ VE A G RR SS S Y SG + G R++YR++V L S
Sbjct: 18 NGKDLCGERVIVEHARGPRRDSSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRC 77
Query: 95 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 78 SWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFKSYSDMKRALEKLDGTEV 127
>gi|1749534|dbj|BAA13825.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 361
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+D L G+ F+E ED RDA D + G F G R+ VE A
Sbjct: 23 YGQILDCKLMN-----GFGFVEVEDARDARDIVNDFQGKEFMGSRIVVEPAR----GERR 73
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
S+ RR+ +R++V L SWQDLKD MR+AG+ F+ R+ G
Sbjct: 74 RRENFRESAASKYPRPRRTGFRLIVENLSEDVSWQDLKDVMRKAGEPTFTDAHRENPG-A 132
Query: 123 GIVDYTSYDDMKYAIRKLD 141
G+V++++ +DM+ A+ L+
Sbjct: 133 GVVEFSTEEDMRNALTSLN 151
>gi|340939264|gb|EGS19886.1| splicing factor srp2-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 307
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 93/208 (44%), Gaps = 43/208 (20%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 78
G+ F+E++D DA D + G F G RL V+ A G R ++ + Y +
Sbjct: 44 GFGFIEYKDPMDARDVVPAFHGSMFMGERLTVQFARGNRHRDTA----NGYGHERAPPRP 99
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 137
RR+ +R+ +TGLP SWQ AG DV +++ R GIV++ + DM+ AI
Sbjct: 100 RRTPHRMEITGLPDGCSWQ--------AGVDVVYTETSRRGNSWEGIVEFETPADMRTAI 151
Query: 138 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPY----------YSR 187
KLD EF+N S + PS P Y R RSRSP Y R
Sbjct: 152 EKLDGREFKN----------------SRTAQPSEPPRYDRGRSRSPIRRYPPPPLDDYDR 195
Query: 188 SRSPSRSWSYSPRSRSYSPRGKYSRRSP 215
P R YSPR Y R Y R+P
Sbjct: 196 RGPPPR--GYSPRRDGY--RDAYRERTP 219
>gi|341888855|gb|EGT44790.1| CBN-RSP-2 protein [Caenorhabditis brenneri]
gi|341896980|gb|EGT52915.1| hypothetical protein CAEBREN_32319 [Caenorhabditis brenneri]
Length = 283
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 83/156 (53%), Gaps = 19/156 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA------HGG 56
YG +VD+ +K G+ F++F+D RDA+DA+ +G + G R+ +E +
Sbjct: 25 YGKLVDVIMK-----NGFGFVDFQDQRDADDAVHDLNGKDLCGERVILEFPRRKVGYNEE 79
Query: 57 RRHSSSMDRYSSYSSGGSRGVSRR------SDYRVLVTGLPSSASWQDLKDHMRRAG-DV 109
R S R ++ GG R S R + +R+++ L + SWQD+KDH+R+ G +
Sbjct: 80 RSGSGYRGREPTFRRGGERQFSNRYSRPCSTRFRLVIDNLSTRFSWQDIKDHIRKLGIEP 139
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+S+ + R +V ++++DD++ A+ KL E
Sbjct: 140 TYSEAHK-RNVNQALVCFSTHDDLREAMNKLQGEEL 174
>gi|126274640|ref|XP_001388006.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126213876|gb|EAZ63983.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 271
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 28/149 (18%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
GPI D+ + G+A++ FE+ DA AI + FDG +L+VE A
Sbjct: 30 GPIADVLIL-----RGFAYITFENSEDATRAIETFNATEFDGQQLQVETAR--------- 75
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG--DVCFSQVFRD--RG 119
R R YRV +T LP +A+WQDLKD +R F+++ RD G
Sbjct: 76 ----------ERPEDTRGKYRVKITNLPDNAAWQDLKDFVREKTGYQGLFAKINRDYESG 125
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNA 148
++G +++ S ++++ AI LD++EF++A
Sbjct: 126 EVSGSLEFASAEELERAIPLLDKAEFQDA 154
>gi|310798588|gb|EFQ33481.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 312
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + DG +F G RL V+ A G R
Sbjct: 33 GEITEIKLMN-----GFGFIEYKDAMDARDVVP--DGSDFMGERLTVQFARGTRHREGGS 85
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+++ + RR+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD G
Sbjct: 86 --APGFNNERAPPRPRRTPHRMQITGLPTDTSWQDLKDFARQSSLDVVYSETGRD-GNGR 142
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNA 148
G V++ + D++ A+ KLD EF+ +
Sbjct: 143 GFVEFETAADLRTAVEKLDGREFKGS 168
>gi|209155162|gb|ACI33813.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 316
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 123/254 (48%), Gaps = 39/254 (15%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRL---RVELAHGGRRH 59
YG I DIDLK G+ F+EF+D RDAEDA+ Y DG L RV + H R
Sbjct: 27 YGRIRDIDLKR-----GFGFVEFDDPRDAEDAV-----YELDGKELCNERVTIEHARVRL 76
Query: 60 SSSM------------------DRYS--SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDL 99
DRY S S R++ R++V L S SWQDL
Sbjct: 77 RGGRGRGGDRGGGGGGGGGRFPDRYGRGSQDSRSRNPPPMRTENRLIVENLSSRVSWQDL 136
Query: 100 KDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 159
KD MR+AG+V F+ R + G+V++ SY D+K A+ KL E R +
Sbjct: 137 KDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNALEKLSGKEIN---GRKIKLIEAA 192
Query: 160 DSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSP 219
R S SRS S S SRSRSR+ SRSR+P RS S+SP+SR SP+ Y+R
Sbjct: 193 KKRGSRSRSRSESSSRSRSRSRNRSPSRSRTPRRSRSHSPKSR--SPKRDYNRSHSRSHS 250
Query: 220 ARSASQRSPSGSPP 233
A + + GSPP
Sbjct: 251 GSPAPRGAAPGSPP 264
>gi|358387407|gb|EHK25002.1| hypothetical protein TRIVIDRAFT_145450 [Trichoderma virens Gv29-8]
Length = 311
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I ++ L G+ F+E++D DA D + DG +F G RL V+ A G R M
Sbjct: 33 GEITEVKLMN-----GFGFIEYKDAMDARDVVP--DGSDFMGERLTVQFARGTRHREGGM 85
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ RR+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD G
Sbjct: 86 GHERAPPR------PRRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGR- 138
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 154
G V++ + D++ A+ KLD EF+ + + V
Sbjct: 139 GFVEFETAADLRTAVEKLDGREFKGSRVQCLV 170
>gi|389640647|ref|XP_003717956.1| hypothetical protein MGG_11457 [Magnaporthe oryzae 70-15]
gi|351640509|gb|EHA48372.1| hypothetical protein MGG_11457 [Magnaporthe oryzae 70-15]
Length = 331
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G F G RL V+ A G R
Sbjct: 33 GKITEIKLMN-----GFGFIEYDDPLDARDVVPAFHGSTFMGERLTVQFARGTRNREGGS 87
Query: 64 DRYSSYSSGGSRGVS--------RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQV 114
GG G RR+ +R+ ++GLP SWQDLKD R++ DV +S+
Sbjct: 88 GGGGGGGGGGGGGYGGERSGPRPRRTAFRMQISGLPVDTSWQDLKDFARQSQLDVVYSET 147
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 157
R+ G G V++ + D+ A+ LD EF++ R +
Sbjct: 148 GRNNNG-EGFVEFETAADLASAVEALDGKEFKDKIVRCVANTQ 189
>gi|50420251|ref|XP_458658.1| DEHA2D04400p [Debaryomyces hansenii CBS767]
gi|49654325|emb|CAG86797.1| DEHA2D04400p [Debaryomyces hansenii CBS767]
Length = 282
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 28/149 (18%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
GP+ D+ L G+AF+ FE+ DA+ A+ D +F+G L++E A + +
Sbjct: 29 GPLTDVQLM-----RGFAFVTFENEEDAKRAVETLDNTDFEGQPLQIEFAREKKEDT--- 80
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC--FSQVFR--DRG 119
R +RV VT LP +WQD KD +R ++ F++VFR D
Sbjct: 81 ----------------RGQFRVKVTNLPDGTAWQDFKDFVRDRTELAPTFAKVFRNYDTD 124
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNA 148
+ G +++ S D++ I L+ SEF+ A
Sbjct: 125 EVIGALEFGSADELATVIPLLNESEFQGA 153
>gi|429859457|gb|ELA34237.1| pre-mRNA splicing factor [Colletotrichum gloeosporioides Nara gc5]
Length = 328
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G +F G RL V+ A G R
Sbjct: 37 GEITEIKLM-----NGFGFIEYKDAMDARDVVPAFHGSDFMGERLTVQFARGTRHREGGN 91
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ R ++ TGLP+ SWQDLKD R++ DV +S+ RD G
Sbjct: 92 GGGFNNERAPPRPRRTPHRMQI--TGLPTDTSWQDLKDFARQSSLDVVYSETGRDGNG-R 148
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
G V++ + D++ A+ KLD EF+
Sbjct: 149 GFVEFETAADLRTAVEKLDGREFK 172
>gi|396459915|ref|XP_003834570.1| hypothetical protein LEMA_P062390.1 [Leptosphaeria maculans JN3]
gi|312211119|emb|CBX91205.1| hypothetical protein LEMA_P062390.1 [Leptosphaeria maculans JN3]
Length = 493
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 28/162 (17%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I ++ L G+ F+E++D DA D + G +F G RL V+ A G R + +
Sbjct: 163 GEITEVKLMN-----GFGFIEYKDPMDARDVVPAFHGSDFMGERLIVQFARGSRARNENF 217
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMT 122
+ RR+ YR+ +T LP SWQDLKD R++G DV +S+V R+R G
Sbjct: 218 TPHERVPP-----RPRRTPYRMRITSLPVETSWQDLKDFARQSGLDVVYSEVGRERDGTG 272
Query: 123 GI-----------------VDYTSYDDMKYAIRKLDRSEFRN 147
+ V+Y + D+K A+ KLDR EF+
Sbjct: 273 SVLYMSALARPRLTCACRFVEYETAADLKAAVEKLDRREFKG 314
>gi|17535713|ref|NP_496441.1| Protein RSP-2 [Caenorhabditis elegans]
gi|56749459|sp|Q23120.1|RSP2_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 2;
AltName: Full=CeSRp40; AltName: Full=RNA-binding protein
srp-4
gi|3880428|emb|CAA91394.1| Protein RSP-2 [Caenorhabditis elegans]
Length = 281
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 19/151 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVE-----LAHGGR 57
YG + D+ +K G+ F++F+D RDA+DA+ +G G R+ +E + +
Sbjct: 25 YGKLSDVIMK-----NGFGFVDFQDQRDADDAVHDLNGKELCGERVILEFPRRKVGYNEE 79
Query: 58 RHSSSM-DRYSSYSSGGSRGVSRR------SDYRVLVTGLPSSASWQDLKDHMRRAG-DV 109
R S R ++ GG R S R + +R+++ L + SWQD+KDH+R+ G +
Sbjct: 80 RSGSGFRGREPTFRKGGERQFSNRYSRPCSTRFRLVIDNLSTRYSWQDIKDHIRKLGIEP 139
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 140
+S+ + R IV +TS+DD++ A+ KL
Sbjct: 140 TYSEAHK-RNVNQAIVCFTSHDDLRDAMNKL 169
>gi|402576825|gb|EJW70782.1| hypothetical protein WUBG_18310 [Wuchereria bancrofti]
Length = 153
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ID+K P +AF+EF+D RDA DA+ GRDGY+FDG R+RVEL G
Sbjct: 44 YGRINFIDIKFTRDVP-FAFIEFDDPRDARDAVHGRDGYDFDGCRIRVELTRGVGPRGPG 102
Query: 63 MDRY--SSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 100
S RRS YRV+V+GLP + SWQDLK
Sbjct: 103 GRPLYGPDPRSPRRGPPPRRSGYRVIVSGLPDTGSWQDLK 142
>gi|190348431|gb|EDK40880.2| hypothetical protein PGUG_04978 [Meyerozyma guilliermondii ATCC
6260]
Length = 251
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 23/134 (17%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 78
GYAF+ FE+ D A+ +G FDG L+VE A R
Sbjct: 3 GYAFVTFENSEDTAKAVETMNGTEFDGQTLQVEFAK-------------------ERKED 43
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDV--CFSQVFRD--RGGMTGIVDYTSYDDMK 134
R +RV VT LP +WQD KD +R + F++VFRD G + G +++ S +++
Sbjct: 44 TRGQFRVKVTNLPDGTAWQDFKDFVRDKTESTPTFAKVFRDYESGEVIGALEFGSREELD 103
Query: 135 YAIRKLDRSEFRNA 148
A+ LD++EF++
Sbjct: 104 KAVPLLDKAEFQDV 117
>gi|225711268|gb|ACO11480.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 197
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS-----SMDRYSSYSSGGS 74
+AF+EF+ RDA+ A+ DG F G R+ VE+A G + MDR + ++
Sbjct: 52 FAFVEFDHNRDADHALERLDGTLFRGQRIVVEIARGPKTADKYLFRGGMDREPTQATWVQ 111
Query: 75 R-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDM 133
+ G + Y++++ L + WQDLKD MR+AG V ++QV R+ GIV + + DM
Sbjct: 112 KYGAPEITQYKLIIRNLSTRIEWQDLKDLMRKAGRVTYAQVHRN-NLREGIVCFENKHDM 170
Query: 134 KYAIRKLDRSEF 145
AI D E
Sbjct: 171 LRAIDIFDDYEL 182
>gi|291409640|ref|XP_002721124.1| PREDICTED: splicing factor SRp55 homolog [Oryctolagus cuniculus]
Length = 284
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 13/105 (12%)
Query: 43 FDGY--RLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLK 100
F GY L V+L +G RR +S D+Y G R++YR++V L S SWQDLK
Sbjct: 22 FSGYGRLLEVDLKNGSRR-TSGRDKY---------GPPVRTEYRLIVENLSSRCSWQDLK 71
Query: 101 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
D MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 72 DFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 115
>gi|389640645|ref|XP_003717955.1| hypothetical protein, variant [Magnaporthe oryzae 70-15]
gi|351640508|gb|EHA48371.1| hypothetical protein, variant [Magnaporthe oryzae 70-15]
Length = 330
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + DG F G RL V+ A G R
Sbjct: 33 GKITEIKLMN-----GFGFIEYDDPLDARDVVP--DGSTFMGERLTVQFARGTRNREGGS 85
Query: 64 DRYSSYSSGGSRGVS--------RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQV 114
GG G RR+ +R+ ++GLP SWQDLKD R++ DV +S+
Sbjct: 86 GGGGGGGGGGGGGYGGERSGPRPRRTAFRMQISGLPVDTSWQDLKDFARQSQLDVVYSET 145
Query: 115 FRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 157
R+ G G V++ + D+ A+ LD EF++ R +
Sbjct: 146 GRNNNG-EGFVEFETAADLASAVEALDGKEFKDKIVRCVANTQ 187
>gi|409082207|gb|EKM82565.1| hypothetical protein AGABI1DRAFT_111169 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200034|gb|EKV49958.1| hypothetical protein AGABI2DRAFT_190388 [Agaricus bisporus var.
bisporus H97]
Length = 289
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I+D + G+ F+EFE +DAE+A+ +G +F G + VE A R
Sbjct: 26 FGRIIDCRVMT-----GFGFVEFESPKDAEEAVHTFNGKSFMGANIVVEFAKESRPRREP 80
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
Y + G R R R++VTG+ SWQDLKD R AG V F+ + R+ G
Sbjct: 81 ---YENERGHGPR-ARRPPGIRLVVTGVSRDTSWQDLKDFGRDAGSVSFADIDRESPGQ- 135
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
G+++Y + +D A+R+LD E R
Sbjct: 136 GVLEYLNREDADRAVRELDGKELR 159
>gi|395854494|ref|XP_003799724.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Otolemur
garnettii]
Length = 179
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 15/142 (10%)
Query: 69 YSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYT 128
+ G G S +D + V LP SWQDLKDH R AGDVC++ +++D T +V++
Sbjct: 38 WGGGVIHGPSWNNDCSIFVGNLPPGGSWQDLKDHPREAGDVCYADIYQD---TTSVVEFV 94
Query: 129 SYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYS--RSRSRSPYY 185
+D+ YAI +LD ++FR + +Y++V + RSP Y S+S S
Sbjct: 95 QKEDITYAIEELDNTKFRSHEGETAYIQV---------NVDGPRSPSYGRSPSQSHSSSR 145
Query: 186 SRSRSPSRSWSYSPRSRSYSPR 207
S SR S+S SY+PR SPR
Sbjct: 146 SGSRGNSKSPSYAPRRSRASPR 167
>gi|389582698|dbj|GAB65435.1| pre-mRNA splicing factor, partial [Plasmodium cynomolgi strain B]
Length = 450
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R+++R++++ LP S WQ LKD MR+ GDV ++ + R +G +V++ + DDM YAI K
Sbjct: 16 RTEHRIIISNLPESCKWQHLKDAMRQCGDVGYANIERGKG----VVEFINRDDMLYAIEK 71
Query: 140 LDRSEFR 146
D SEF+
Sbjct: 72 FDGSEFK 78
>gi|308510478|ref|XP_003117422.1| CRE-RSP-2 protein [Caenorhabditis remanei]
gi|308242336|gb|EFO86288.1| CRE-RSP-2 protein [Caenorhabditis remanei]
Length = 281
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 19/156 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA------HGG 56
YG +VD+ +K G+ F++F+D RDA+DA+ +G + G R+ +E +
Sbjct: 25 YGKLVDVIMK-----NGFGFVDFQDQRDADDAVHDLNGKDLCGERVILEFPRRKVGYNEE 79
Query: 57 RRHSSSMDRYSSYSSGGSRGVSRR------SDYRVLVTGLPSSASWQDLKDHMRRAG-DV 109
R R ++ GG R S R + +R++V L + SWQD+KDH+R+ G +
Sbjct: 80 RSGGGYRGREPTFRRGGERQFSNRYSRPCSTRFRLVVDNLSTRYSWQDIKDHIRKLGIEP 139
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
+S+ + R +V ++++DD++ A+ KL E
Sbjct: 140 TYSEAHK-RNVNQALVCFSTHDDLRDAMNKLQGEEL 174
>gi|196007380|ref|XP_002113556.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583960|gb|EDV24030.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 263
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + ++ LK + F+EF+D RDAEDA+ + G R+ VE A R
Sbjct: 25 YGKLKEVTLK-----GTFGFVEFDDSRDAEDAVYDLNNKELCGDRIIVEFARNRREARGR 79
Query: 63 MDRYSSYSSGGSRGVSR--------------RSDYRVLVTGLPSSASWQDLKDHMRRAGD 108
D S GG R+DYR+ + L S SWQDLKD++R D
Sbjct: 80 GDDRYGRSRGGRSSGGGGGGGPAAGYGSAPVRTDYRLYINNLSSRVSWQDLKDYIRNKTD 139
Query: 109 VCFSQVFRDRGGM-TGIVDYTSYDDMKYAIRKLDRSEF 145
+ S + + IV++ S DD++YAI+KLD +E
Sbjct: 140 ISVSYADAHKQSVGQAIVEFDSKDDLRYAIKKLDNTEI 177
>gi|299753075|ref|XP_001833047.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea okayama7#130]
gi|298410132|gb|EAU88736.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea okayama7#130]
Length = 279
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+D + G+ F+EFE +DAEDA+ +G F G + VE A R
Sbjct: 26 YGRIIDCRVMT-----GFGFVEFESSKDAEDAVHQFNGKPFMGTAIVVEFAKESRPRREV 80
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
R R R++V+G+ SWQDLKD R V F+ + RD G
Sbjct: 81 APR-----------ARRPPGVRLIVSGISRDTSWQDLKDFGREVASVSFADIDRDVPGQ- 128
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 154
G+++Y S +D A++ LD E R R +
Sbjct: 129 GVLEYLSREDADRAVKDLDGRELRGKLVRVVL 160
>gi|225712990|gb|ACO12341.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290462763|gb|ADD24429.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290562097|gb|ADD38445.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 250
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ++ +K GY F+EF+D RDA+D + DG F G R+RVE+A R
Sbjct: 28 YGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGKEFQGGRVRVEMARDPRERRGR 82
Query: 63 MDRYSSYSSGGSRGVSR-----------------RSDYRVLVTGLPSSASWQDLKDHMRR 105
GG G R++YR+ V L S SWQDLKD+ R
Sbjct: 83 DRDRGYERRGGGGGGYDRRDTRGDRGRRGNPPGPRTNYRITVQNLSSRTSWQDLKDYFRA 142
Query: 106 AGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
AG++ ++ R G G+V++ S + YAI D E
Sbjct: 143 AGEITYTNAHTPRQG-EGVVEFASSRGLDYAIDHQDELEL 181
>gi|388856974|emb|CCF49394.1| related to pre-mrna splicing factor srp55 [Ustilago hordei]
Length = 259
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS-----MDRYSSYSSGGS 74
+ F+EFE +RDAEDA++ DG NF G R+ V+ A R D Y GG
Sbjct: 38 FGFVEFEHHRDAEDAVKDFDGKNFMGERIVVQHAKQSERRRPEPAGYGSDPYDRRGGGGR 97
Query: 75 RGVSR----------------RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR 118
SR R +R +V+ LP + SWQDLKD R G V F+ V R
Sbjct: 98 EPPSRYGSSVAPPPRREPRLRRGQFRCIVSNLPPNTSWQDLKDIGREHGSVSFADVDAAR 157
Query: 119 GGMTGIVDYTSYDDMKYAIRKLDRSEFR 146
G+++Y + DD + A+ K++ +E R
Sbjct: 158 PD-EGVIEYDNRDDYERALDKIEGTELR 184
>gi|47224367|emb|CAG09213.1| unnamed protein product [Tetraodon nigroviridis]
Length = 151
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 62/124 (50%), Gaps = 15/124 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EF+D RDAEDA+ DG R+ +E A R
Sbjct: 27 YGRIRDIDLK-----KGFGFVEFDDPRDAEDAVYELDGKELCNERVTIEHARVRLRGGRG 81
Query: 63 MDRYSS-----YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
Y G G SR R++ R++V L S SWQDLKD MR+AG+V F+
Sbjct: 82 RTWTGGRFSDRYGRGSQSGRSRNPPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFA 141
Query: 113 QVFR 116
R
Sbjct: 142 DAHR 145
>gi|391343504|ref|XP_003746049.1| PREDICTED: serine-arginine protein 55-like [Metaseiulus
occidentalis]
Length = 296
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 78
GYAF++F RDA DA+ +G + G R+ VE+A G +R S ++ S S+ S
Sbjct: 38 GYAFVDFRTDRDASDAVHDMNGRSMRGERMTVEIASGRQRKGSRDQKHRSSSARND--AS 95
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 138
+Y+++V L S SW+D KD +RR GIV + ++ D+K AI+
Sbjct: 96 SNGEYQIVVENLSSRISWKDFKDMIRREDIEVVHVDAHKLHKHQGIVKFRTHSDLKRAIK 155
Query: 139 KLDRSEF 145
K E
Sbjct: 156 KFQNREI 162
>gi|346466769|gb|AEO33229.1| hypothetical protein [Amblyomma maculatum]
Length = 289
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 9/112 (8%)
Query: 39 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGS-----RGVSRRSDYRVLVTGLPSS 93
+G G R+ VELA G RR + D Y S ++ S G R++Y++ V L S
Sbjct: 4 NGKELLGDRVSVELARGIRRGA---DYYRSRAASRSPPRRRYGPPTRTEYQLTVENLSSR 60
Query: 94 ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
SWQDLKD+MR+AG+V ++ R R G+V++ +Y DMK A+ KLD ++
Sbjct: 61 VSWQDLKDYMRQAGEVTYADAHRLRRN-EGVVEFATYSDMKNALEKLDNTDL 111
>gi|210075657|ref|XP_502448.2| YALI0D05547p [Yarrowia lipolytica]
gi|199425767|emb|CAG80636.2| YALI0D05547p [Yarrowia lipolytica CLIB122]
Length = 339
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVE---LAHGGRRH 59
+GPI ++ L Y F+EF+ +DAIR +D N DG L E +
Sbjct: 37 HGPIKEVKLI-----KNYGFIEFDSL---DDAIRAKD--NVDGQPLNGEPLFCTYANPIK 86
Query: 60 SSSMDRYSSYSSGGSRGVSRRSD-YRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRD 117
Y + RG R+ D +RV ++GL SWQDLKD R A DV ++ V RD
Sbjct: 87 VREPRTYRDRNDRNDRGGDRKEDIFRVNISGLAPGVSWQDLKDFGRTADVDVTYTNVSRD 146
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEFR 146
R G G V++ S D M+ A+ KLD +EF+
Sbjct: 147 REG-EGTVEFRSADQMEQAVSKLDGTEFK 174
>gi|241846316|ref|XP_002415562.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215509774|gb|EEC19227.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 355
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR---- 58
+G I ++ LK G+ F+EF+D RDA+DA+ +G DG R L GRR
Sbjct: 27 FGKIREVLLK-----NGFGFVEFDDDRDADDAVYELNGRELDGERYFTTL---GRRAGSR 78
Query: 59 -------------HSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHM 103
H S+ R ++ G R+DYRV++ L S SWQDLKD M
Sbjct: 79 NGTPRPGCAQLYGHVSNCFRLFGRATAPVNRYGPPTRTDYRVIIENLSSRISWQDLKDRM 138
Query: 104 RRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
R+ GDV ++ R R G+V++ SY DM+ AI KLD +E
Sbjct: 139 RQVGDVTYADAHR-RKRNEGVVEFASYSDMRRAIDKLDNTEL 179
>gi|62089298|dbj|BAD93093.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 419
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 26 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 84
Query: 140 LDRSEF 145
LD +E
Sbjct: 85 LDGTEV 90
>gi|343426008|emb|CBQ69540.1| related to pre-mrna splicing factor srp55 [Sporisorium reilianum
SRZ2]
Length = 248
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 20/146 (13%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS---SGGSRG 76
+ F+EFE RDAEDA++ DG NF G R+ V+ A G R + Y+S GG+R
Sbjct: 38 FGFVEFEHPRDAEDAVKDFDGKNFMGERILVQHAKSGERRRAEPAGYASDPYDRRGGARD 97
Query: 77 V----------------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
RR +R +++ LP + SWQDLKD R G + F+ V +
Sbjct: 98 APSSRYGAPPPPRREPRLRRGQFRCVISNLPPNTSWQDLKDIGREHGSISFADVDPNNPD 157
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
G ++Y + DD + A+ K++ E R
Sbjct: 158 -EGFIEYDNRDDYERALDKIEGIELR 182
>gi|320589309|gb|EFX01771.1| pre-RNA splicing factor [Grosmannia clavigera kw1407]
Length = 398
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 93/230 (40%), Gaps = 54/230 (23%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR------ 57
G I+DI L G+ F+E+ D DA D + G +F G RL V+ A G R
Sbjct: 50 GEILDIKLMN-----GFGFIEYRDAMDARDVVPAFHGSDFMGERLTVQFARGRRGEGGGP 104
Query: 58 ----------------------------RHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTG 89
S RR+ +R+ +TG
Sbjct: 105 GGGPGGGLGGGPNHGPGGGGLGHGPYGGGGGGGPGGGGYNSHDRPPPRPRRTAHRMAITG 164
Query: 90 LPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 148
LP+ SWQDLKD RR+G +V FS+ +R G G V++ S D+ AI KLD +EFR+
Sbjct: 165 LPNDTSWQDLKDFARRSGLEVVFSET--NRFG-DGSVEFESAQDLATAIEKLDNTEFRDK 221
Query: 149 FSRSYVRVREYDSRRSYSRSPSRSPYYS-----------RSRSRSPYYSR 187
V V S S S S YS R RSRSP+ R
Sbjct: 222 IVTCSVGVSLAVSDLSASASVCLLTMYSQVFTDMPPRDGRGRSRSPHPGR 271
>gi|156098601|ref|XP_001615316.1| alternative splicing factor ASF-1 [Plasmodium vivax Sal-1]
gi|148804190|gb|EDL45589.1| alternative splicing factor ASF-1, putative [Plasmodium vivax]
Length = 208
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 33/173 (19%)
Query: 3 YGPIVDIDLKIPPRPPG--YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVE--------- 51
+G I +ID+K G YAF+E+E Y+ AE I ++G GY L+VE
Sbjct: 31 FGKITEIDIKYNRNTNGTNYAFIEYESYKSAEKTIENKNGQKLKGYMLKVEYSIDKKNKE 90
Query: 52 ----LAHGGRRHSSSMDRYSSYSSGGSRGV---SRRSDYRVLVTGLPSSASWQD-LKDHM 103
+A GGR + S G V RS YRV+V P D +K +
Sbjct: 91 GGDLIALGGR---------EAVSKGLLTNVRLPKNRSHYRVVVKNFPRKKIKLDGIKTFL 141
Query: 104 RRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 156
+AG V ++Q+ + I +Y + M A+ LDR+ F N+ + YVRV
Sbjct: 142 MKAGKVIYTQLEDE----ITIAEYDCREGMLRAVNTLDRTMF-NSTRKVYVRV 189
>gi|221055067|ref|XP_002258672.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193808742|emb|CAQ39444.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 837
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 14/154 (9%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
+ YG IV++ K +AF+E+E AE AI+ +G F G L V+ H G +
Sbjct: 330 LKYGDIVNMQWKTR-----FAFIEYEKTSHAEIAIKEENGQLFFGEELNVQPHHAGNYFN 384
Query: 61 SSMDRYS--------SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
+ D + +YS + +++ R+++ + ASWQDLKD R G V ++
Sbjct: 385 NRNDNRNYYPPTYGRNYSPNRNEIREKKNALRIVIRNVDEKASWQDLKDFGRDIGSVNYA 444
Query: 113 QVFRDRGGMT-GIVDYTSYDDMKYAIRKLDRSEF 145
+F+D GI++Y +Y+++K A+ L+ +F
Sbjct: 445 NIFQDENKERFGIIEYYNYENVKKAVEVLNGRKF 478
>gi|449664983|ref|XP_002156792.2| PREDICTED: serine/arginine-rich splicing factor 4-like [Hydra
magnipapillata]
Length = 244
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH-GGR--RHSSSMDRYSSYSSGGSR 75
GY F+ F+D RDA+DAI +G G RL+VE A GR ++ S
Sbjct: 41 GYGFVVFDDRRDADDAIYELNGKELMGARLQVEYAKPSGRSDKYDGGYRDRERERSRDRG 100
Query: 76 GVSRR------SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTS 129
G S R +D+R+++ + + SWQD+KD+ R+AG+V F++ R++ G G+V++ S
Sbjct: 101 GFSSRYGRPYNTDFRLVIENVSTRCSWQDIKDYFRQAGEVTFAKCHREKMG-EGVVEFAS 159
Query: 130 YDDMKYAIRKLDRSEF 145
DMK A+RKLD SE
Sbjct: 160 SSDMKNALRKLDGSEL 175
>gi|294899382|ref|XP_002776614.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239883668|gb|EER08430.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 138
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 83 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 142
YRV+VT LP ASWQDLKD MR AG+ F++V RD G+ G + D++ A+R LD
Sbjct: 41 YRVVVTNLPRGASWQDLKDKMRDAGECRFTEVTRDGVGVAG---FAGQSDVERAVRTLDD 97
Query: 143 SEFRNAF-SRSYVRVREYDSRR 163
+E ++ F S +RV E+ +
Sbjct: 98 TEMKSHFGDTSIIRVEEFTDEK 119
>gi|443899862|dbj|GAC77190.1| alternative splicing factor SRp55/B52/SRp75 [Pseudozyma antarctica
T-34]
Length = 260
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 68/145 (46%), Gaps = 19/145 (13%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS----SMDRYSSYSSGGSR 75
+ F+EFE RDAEDA++ DG NF G R+ V+ A G R D Y R
Sbjct: 38 FGFVEFEHPRDAEDAVKDFDGRNFMGERIVVQHAKSGERRREPAGYGADPYDRRGGPPGR 97
Query: 76 GVSRR--------------SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 121
R +R +V+ LP + SWQDLKD R G + F+ V R
Sbjct: 98 EPPSRYGAPPPRREPRIRRGQFRCIVSNLPPNTSWQDLKDIGREHGSISFADVDPSRPD- 156
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEFR 146
G+++Y + DD + A+ K++ E R
Sbjct: 157 EGVIEYDNRDDYERALDKIEGIELR 181
>gi|156086366|ref|XP_001610592.1| RNA recognition motif containing protein [Babesia bovis T2Bo]
gi|154797845|gb|EDO07024.1| RNA recognition motif containing protein [Babesia bovis]
Length = 382
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 18/139 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+GPI ID + +AF++F RDAE A+R + G +L+V + H R S
Sbjct: 197 FGPINKIDYRR-----NFAFVDFVKSRDAEVAMREMNERVLLGTKLKV-VPHSERSKRSE 250
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+R ++S + V L +SASWQDLKD R+AG+V ++ V
Sbjct: 251 TNREPDFASQAT------------VLNLDNSASWQDLKDFARQAGEVVYASVIIRDQKRY 298
Query: 123 GIVDYTSYDDMKYAIRKLD 141
G+V++TS MK A+ +L+
Sbjct: 299 GLVEFTSPKTMKAAVEQLN 317
>gi|238878201|gb|EEQ41839.1| predicted protein [Candida albicans WO-1]
Length = 331
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 28/148 (18%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
P+V++ L GYAF+ FE+ DA+ A+ + F+G +L++E A R +
Sbjct: 78 APVVEVRLM-----EGYAFVTFENEDDAKQALELLNDAEFNGEKLQIEFAKERREDT--- 129
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV--CFSQVFR--DRG 119
R YR+L+T L +WQD+KD +R D + +VF D G
Sbjct: 130 ----------------RGKYRLLITNLAEGTAWQDIKDFVREKTDSQPSYVKVFTNFDNG 173
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRN 147
T + + S +D+ AI LD++ FR+
Sbjct: 174 ETTCSMQFQSREDLDRAIPLLDKAVFRD 201
>gi|342326382|gb|AEL23106.1| hnRNP protein [Cherax quadricarinatus]
Length = 284
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 30/155 (19%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR---- 58
YG + DI +K G+ F+EF+D RDA+DA+ +G G R+ VE A R
Sbjct: 21 YGRLRDIVIK-----NGFGFVEFDDDRDADDAVYEMNGKELLGGRVTVEKARAAPRMRWP 75
Query: 59 --------HSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
HSS G++ R+DYR+ V L S SWQDLKD MR+AG+V
Sbjct: 76 RAPPPRGFHSSRF------------GMAARTDYRLTVEDLSSRVSWQDLKDFMRQAGEVT 123
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ + R G+V++ +Y DMK A+ +LD E
Sbjct: 124 YADAHKYRRN-EGVVEFATYADMKNAMHRLDGKEL 157
>gi|389583241|dbj|GAB65976.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 728
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 14/154 (9%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR-H 59
+ YG IV++ K +AF+E+E AE AI+ +G F G L V+ H G H
Sbjct: 159 LKYGDIVNMQWKTR-----FAFIEYEKISHAEIAIKEENGQFFFGEELNVQPHHAGNYFH 213
Query: 60 SSSMDR------YS-SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS 112
+ + +R Y+ +YS + +++ R++V + ASWQDLKD R G V ++
Sbjct: 214 NRNDNRGFYPPPYARNYSPNRNENREKKNALRIVVKNVDEKASWQDLKDFGRDVGSVNYA 273
Query: 113 QVFRDRGGMT-GIVDYTSYDDMKYAIRKLDRSEF 145
+ +D GI++Y +Y+++K A+ L+ +F
Sbjct: 274 NIIQDDNKERFGIIEYYNYENVKKAVEVLNGRKF 307
>gi|326920602|ref|XP_003206558.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Meleagris
gallopavo]
Length = 233
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 24 EFEDYRDAEDAIRGRDGYNFDGYRL---RVELAHGGRRHSSSMDRY-------SSYSSGG 73
EFED RDA+DA+ Y DG L RV + H R S
Sbjct: 12 EFEDPRDADDAV-----YELDGKELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDR 66
Query: 74 SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDM 133
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+
Sbjct: 67 RSAPPLRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDL 125
Query: 134 KYAIRKLDRSEF 145
K AI KL E
Sbjct: 126 KNAIEKLSGKEI 137
>gi|225712350|gb|ACO12021.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290463073|gb|ADD24584.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 195
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 10 DLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR-----RHSSSMD 64
D+K+ R +AF+EF+ +RDA+ A+ DG F G R+ VE+A G R R ++
Sbjct: 45 DMKLKTR---FAFIEFDYHRDADHAVDNLDGLTFRGRRISVEVARGPRTADKYRFKGGLN 101
Query: 65 RYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTG 123
++ R G + Y++LV L + WQDLKD M++AG V ++ ++ G
Sbjct: 102 HEPVQATWVKRYGTPEITKYKILVKNLSTRIEWQDLKDLMKKAGTVTYALAHKN-NMHEG 160
Query: 124 IVDYTSYDDMKYAI 137
+V +++ + M AI
Sbjct: 161 MVCFSNEEGMLKAI 174
>gi|159163525|pdb|1X4A|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor Sf2
Length = 109
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 42/60 (70%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE GR S
Sbjct: 46 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGSG 105
>gi|290562259|gb|ADD38526.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 195
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 10 DLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR-----RHSSSMD 64
D+K+ R +AF+EF+ +RDA+ A+ DG F G R+ VE+A G R R ++
Sbjct: 45 DMKLKTR---FAFIEFDYHRDADHAVDNLDGLTFRGRRISVEVARGPRTADKYRFKGGLN 101
Query: 65 RYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTG 123
++ R G + Y++LV L + WQDLKD M++AG V ++ ++ G
Sbjct: 102 HEPVQATWVKRYGTPEITKYKILVKNLSTRIEWQDLKDLMKKAGTVTYALAHKN-NMHEG 160
Query: 124 IVDYTSYDDMKYAI 137
+V +++ + M AI
Sbjct: 161 MVCFSNEEGMLKAI 174
>gi|297259798|ref|XP_001084701.2| PREDICTED: hypothetical protein LOC696054 [Macaca mulatta]
Length = 294
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 18/111 (16%)
Query: 43 FDGY--RLRVELAHGG------RRHSSSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSA 94
F GY L V+L +G R +S D+Y G R++YR++V L S
Sbjct: 22 FSGYGRLLEVDLKNGCGGGGYSSRRTSGRDKY---------GPPVRTEYRLIVENLSSRC 72
Query: 95 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 73 SWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 122
>gi|124804016|ref|XP_001347876.1| alternative splicing factor ASF-1 [Plasmodium falciparum 3D7]
gi|23496128|gb|AAN35789.1| alternative splicing factor ASF-1 [Plasmodium falciparum 3D7]
Length = 200
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 23/156 (14%)
Query: 3 YGPIVDIDLKIPPRPPG--YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YG I DID+K G YAF+E+E+ + AE I+ R+G F GY L+VE + +++
Sbjct: 32 YGKISDIDIKYNRNSNGTNYAFIEYENPKSAEKTIQKRNGKKFKGYMLKVEYS-IEKKNR 90
Query: 61 SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
D Y RS+YRV+V P ++++K+ + RAG V + + +D G
Sbjct: 91 DLNDIY-------------RSEYRVVVKHFPR--FFKNIKEFLSRAGKVLY--IHKDNGL 133
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 156
+ I +Y + M AI LDR+ + N+ + YVRV
Sbjct: 134 I--IAEYEDKESMIKAISTLDRTIY-NSKRKVYVRV 166
>gi|344302325|gb|EGW32630.1| hypothetical protein SPAPADRAFT_61691 [Spathaspora passalidarum
NRRL Y-27907]
Length = 291
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 28/147 (19%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G +VD+ L G+AF+ F++ DA A+ + FDG RL VE A
Sbjct: 40 GHVVDVQLM-----RGFAFVRFDNEEDATRAVETLNDSEFDGQRLLVEYAK--------- 85
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV--CFSQVFR--DRG 119
R R YRV +T L +WQD+KD +R D + +VFR D
Sbjct: 86 ----------ERKEDTRGKYRVKLTNLEDGTAWQDIKDFVRDKTDSEPSYVKVFRNYDTN 135
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR 146
+ G ++++S ++++ AI LD++EFR
Sbjct: 136 EIVGALEFSSAEELEKAIPLLDKAEFR 162
>gi|68482041|ref|XP_715038.1| hypothetical protein CaO19.7238 [Candida albicans SC5314]
gi|46436641|gb|EAK96000.1| hypothetical protein CaO19.7238 [Candida albicans SC5314]
Length = 286
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 28/148 (18%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
P+V++ L GYAF+ FE+ DA+ A+ + F+G +L++E A R +
Sbjct: 33 APVVEVRLM-----EGYAFVTFENEDDAKQALELLNDAEFNGEKLQIEFAKERREDT--- 84
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV--CFSQVFR--DRG 119
R YR+L+T L +WQD+KD +R D + +VF D G
Sbjct: 85 ----------------RGKYRLLITNLAEGTAWQDIKDFVREKTDSQPSYVKVFTNFDNG 128
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRN 147
T + + S +D+ AI LD++ FR+
Sbjct: 129 ETTCSMQFQSREDLDRAIPLLDKAVFRD 156
>gi|221117454|ref|XP_002167286.1| PREDICTED: uncharacterized protein LOC100197032 [Hydra
magnipapillata]
Length = 394
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 75/156 (48%), Gaps = 23/156 (14%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG----GRR 58
+G + +I +K Y FL++E R+AEDA+ +F G R++VE A G R
Sbjct: 49 FGHVREIAMK-----GNYCFLQYEKTREAEDAVYEMHDRSFFGERIQVEHARQPKEFGFR 103
Query: 59 HSSSMDRYSSYSSGGSRGVS-------------RRSDYRVLVTGLPSSASWQDLKDHMRR 105
S Y +RSDYR+ VT L + QDLK M++
Sbjct: 104 APSRFGGSRGYGGYSRSSTYSSSRDYSRRRSPPQRSDYRLSVTNLSTRCDAQDLKAVMQK 163
Query: 106 AGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 141
AGDV FS R R G G+V++ S DM+ A++KLD
Sbjct: 164 AGDVVFSDAHRRRVG-EGVVEFASRKDMERALKKLD 198
>gi|241950483|ref|XP_002417964.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223641302|emb|CAX45682.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 291
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 28/148 (18%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
P+V++ L GYAF+ FE+ D++ A+ + F+G +L++E A R +
Sbjct: 33 APVVEVRLM-----EGYAFVTFENEDDSKQALELLNDAEFNGEKLQIEFAKEKREDT--- 84
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV--CFSQVFR--DRG 119
R YR+L+T L +WQD+KD +R D + +VF D G
Sbjct: 85 ----------------RGKYRLLITNLAEGTAWQDIKDFVREKTDSQPSYVKVFTNYDNG 128
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRN 147
T + + S +D+ AI LD++ FR+
Sbjct: 129 ETTCSMQFQSREDLDRAIPLLDKAVFRD 156
>gi|344279656|ref|XP_003411603.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Loxodonta
africana]
Length = 423
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 76 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 135
G R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK
Sbjct: 182 GPPVRTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERAN-EGVIEFRSYSDMKR 240
Query: 136 AIRKLDRSEF 145
A+ KLD +E
Sbjct: 241 ALDKLDGTEI 250
>gi|432102741|gb|ELK30220.1| Serine/arginine-rich splicing factor 6 [Myotis davidii]
Length = 306
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 68 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 126
Query: 140 LDRSEF 145
LD +E
Sbjct: 127 LDGTEI 132
>gi|156096635|ref|XP_001614351.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803225|gb|EDL44624.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 778
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
+ YG IV++ K +AF+E+E AE AI+ +G F G L V+ H G
Sbjct: 246 LKYGDIVNMQWKTR-----FAFIEYEKTSHAEIAIKEENGQFFFGEELNVQPHHAGNYFH 300
Query: 61 SSMDRYS-------SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 113
+ D S +YS + +++ R++V + ASWQDLKD R G V ++
Sbjct: 301 NRSDNRSFYPPYGRTYSPNRNESREKKNALRIVVKNIDEKASWQDLKDFGRDVGSVNYAN 360
Query: 114 VFRDRGGMT-GIVDYTSYDDMKYAIRKLDRSEF 145
+ +D GI++Y + + +K A+ L+ +F
Sbjct: 361 IIQDDNKERFGIIEYYNSETVKKAVEVLNGRKF 393
>gi|326931663|ref|XP_003211946.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Meleagris
gallopavo]
Length = 310
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 72 RTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 130
Query: 140 LDRSEF 145
LD +E
Sbjct: 131 LDGTEI 136
>gi|342326406|gb|AEL23118.1| 52K active chromatin boundary protein [Cherax quadricarinatus]
Length = 169
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 1 MMYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
+ YGP+ D+ + I G+ F+E +DYRDA DA+ +G G R +E A R
Sbjct: 58 LCYGPLGDLVIMI-----GFCFVEIDDYRDAYDAVCYMNGKELLGGRCSMEKARAAPRMM 112
Query: 61 SSMDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 113
SS G+ ++YR+ + L S SWQDLKD MR+AG V +
Sbjct: 113 WPRAPPPIGSSSSLFGMPALANYRLTIENLSSRVSWQDLKDFMRQAGKVTYGH 165
>gi|345310699|ref|XP_001520239.2| PREDICTED: hypothetical protein LOC100091342 [Ornithorhynchus
anatinus]
Length = 334
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 26 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 84
Query: 140 LDRSEF 145
LD +E
Sbjct: 85 LDGTEI 90
>gi|313227227|emb|CBY22374.1| unnamed protein product [Oikopleura dioica]
Length = 263
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 72/170 (42%), Gaps = 44/170 (25%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I I+LK PGY F+ FED RDAE+A R DG G ++ VE+A G S
Sbjct: 29 FGHIKSINLK-----PGYGFVVFEDKRDAEEAARDLDGKRMCGEKVDVEMAKGPGNKSR- 82
Query: 63 MDRYSSYSSGGSRGVSR---------------------------RSDYRVLVTGLPSSAS 95
YS G R + R R D + +T L + S
Sbjct: 83 ----KEYSRSGDRPIVRDTRSGFNGRRRSRSRDRGFSSRKKEPYRDDATISITNLSTRCS 138
Query: 96 WQDLKDHMRRAG----DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 141
WQDLKD +R D C + + DR V + S DM+ A+ ++D
Sbjct: 139 WQDLKDFIRDNARVEPDFCDAHKYEDR---IATVSFRSSSDMRKAVDRMD 185
>gi|225717806|gb|ACO14749.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 189
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 70/151 (46%), Gaps = 27/151 (17%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ++ +K GY F+EF+D RDA+D + DG F G R+RVE+A R
Sbjct: 28 YGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGKEFQGGRVRVEMARDPRDRRGR 82
Query: 63 MDRYSSYSSGGSRGVSR---------------------RSDYRVLVTGLPSSASWQDLKD 101
S GS S +++YR+ V L S SWQDLKD
Sbjct: 83 DRGSDRGSDRGSDRGSDRRSSYDRRDSGRGRRGNPPGPKTNYRITVQNLSSRTSWQDLKD 142
Query: 102 HMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 132
+ R AGD+ ++ R G G+V++ S D
Sbjct: 143 YFRAAGDITYTNAHTPRQG-EGVVEFASSQD 172
>gi|255728963|ref|XP_002549407.1| predicted protein [Candida tropicalis MYA-3404]
gi|240133723|gb|EER33279.1| predicted protein [Candida tropicalis MYA-3404]
Length = 283
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 28/149 (18%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
P+VD+ L GYAF+ FE+ DA+ AI +G +L++E A
Sbjct: 33 APVVDVRLM-----EGYAFVTFENEEDAKQAIELLGETELNGVKLQIEFAR--------- 78
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGD--VCFSQVFR--DRG 119
R R YR+ +T LP +WQD+KD +R + V + +VF +
Sbjct: 79 ----------ERKEDTRGKYRLSITNLPEGTAWQDVKDFVREKTNSPVNYVKVFTNYETN 128
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNA 148
T + + S +D++ AI LD+S F +
Sbjct: 129 ETTCSLQFESAEDLEKAIPLLDKSIFNDV 157
>gi|76155295|gb|AAX26558.2| SJCHGC09454 protein [Schistosoma japonicum]
Length = 208
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R++YRV+V L S SWQDLKD MR+AG+V ++ + GIV++ +Y DMK AI K
Sbjct: 13 RTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEK 71
Query: 140 LDRSEF 145
D E
Sbjct: 72 FDGYEL 77
>gi|301763950|ref|XP_002917433.1| PREDICTED: hypothetical protein LOC100470426 [Ailuropoda
melanoleuca]
Length = 306
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 69 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 127
Query: 140 LDRSEF 145
LD +E
Sbjct: 128 LDGTEI 133
>gi|410953846|ref|XP_003983581.1| PREDICTED: serine/arginine-rich splicing factor 6 [Felis catus]
Length = 318
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 81 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 139
Query: 140 LDRSEF 145
LD +E
Sbjct: 140 LDGTEI 145
>gi|402586916|gb|EJW80852.1| hypothetical protein WUBG_08240, partial [Wuchereria bancrofti]
Length = 246
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 24 EFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSY-----SSGGSRGVS 78
EF+D RDA+DA+ +G G R+ +E + G R + + S G
Sbjct: 1 EFDDPRDADDAVYELNGKELCGERVILEFSRRGPRSRMGFGGFDRFPPPRRESRLVYGPP 60
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 138
+++ YR++V L S SWQDLKD MR AG+V F+ + GIV + + DD++ A+
Sbjct: 61 QQTRYRLIVENLSSRCSWQDLKDIMRTAGEVTFADAHKQHPN-EGIVCFLTRDDLERALD 119
Query: 139 KLDRSEF 145
KL E
Sbjct: 120 KLQGKEV 126
>gi|281345554|gb|EFB21138.1| hypothetical protein PANDA_005614 [Ailuropoda melanoleuca]
Length = 319
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 82 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 140
Query: 140 LDRSEF 145
LD +E
Sbjct: 141 LDGTEI 146
>gi|194374487|dbj|BAG57139.1| unnamed protein product [Homo sapiens]
Length = 158
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I+++DLK GY F+EF+D RDA+DA+ +G + G R+ VE A G RR S
Sbjct: 25 YGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSY 79
Query: 63 MDRYSSYS---SGGSR-GVSRRSDYRVLVTGLPSSASWQDLK 100
S Y SG + G R++YR++V L S SWQDLK
Sbjct: 80 GSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLK 121
>gi|260947976|ref|XP_002618285.1| hypothetical protein CLUG_01743 [Clavispora lusitaniae ATCC 42720]
gi|238848157|gb|EEQ37621.1| hypothetical protein CLUG_01743 [Clavispora lusitaniae ATCC 42720]
Length = 317
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 28/147 (19%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
GP+VD+ + GYAF+ +E+ DA A+ + G L++E A R +
Sbjct: 68 GPLVDVQMMR-----GYAFITYENPSDATRAVDTLTNTDLGGAPLQIEFAREKREDT--- 119
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV--CFSQVFR--DRG 119
R +R T LP +WQD KD +R F++VFR D G
Sbjct: 120 ----------------RGQHRAKATNLPEGTAWQDFKDFVREKTGCSPTFAKVFRDYDSG 163
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFR 146
G ++++S D+++ AI +L+ ++F
Sbjct: 164 NTIGALEFSSADELQKAISELNEADFN 190
>gi|338719068|ref|XP_001500385.3| PREDICTED: serine/arginine-rich splicing factor 6 [Equus caballus]
Length = 164
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 24 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 82
Query: 140 LDRSEF 145
LD +E
Sbjct: 83 LDGTEI 88
>gi|313241655|emb|CBY33880.1| unnamed protein product [Oikopleura dioica]
Length = 247
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 72/170 (42%), Gaps = 44/170 (25%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I I+LK PGY F+ FED RDAE+A R DG G ++ VE+A G S
Sbjct: 11 FGHIKSINLK-----PGYGFVVFEDRRDAEEAARDLDGKRMCGEKVDVEMAKGPGNKSR- 64
Query: 63 MDRYSSYSSGGSRGVSR---------------------------RSDYRVLVTGLPSSAS 95
YS G R + R R D + +T L + S
Sbjct: 65 ----KEYSRSGDRPIVRDTRSGFNGRRRSRSRDRGFSSRKKEPYRDDATISITNLSTRCS 120
Query: 96 WQDLKDHMRRAG----DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 141
WQDLKD +R D C + + DR V + S DM+ A+ ++D
Sbjct: 121 WQDLKDFIRDNARVEPDFCDAHKYEDR---IATVSFRSSGDMRKAVDRMD 167
>gi|242012605|ref|XP_002427020.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511265|gb|EEB14282.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 403
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R++YR++V L S SWQDLKD+MR+AG+V ++ ++R GIV+++S D+K AI K
Sbjct: 185 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKNRRN-EGIVEFSSSSDLKAAIDK 243
Query: 140 LDRSEF 145
LD +E
Sbjct: 244 LDGTEL 249
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS-- 60
YG I DI +K GY F+EF+DYRDA+DA+ +G + G R+ VE A G R S
Sbjct: 27 YGRIRDILIK-----NGYGFVEFDDYRDADDAVYELNGKDLLGERVSVERARGTPRGSDR 81
Query: 61 -SSMDRYSSY 69
DRY +
Sbjct: 82 WKDRDRYGRF 91
>gi|170284807|gb|AAI61135.1| Unknown (protein for IMAGE:7797355) [Xenopus (Silurana) tropicalis]
Length = 428
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 83 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 142
YR+ V L S SWQDLKD MR+AG+V ++ + R G++++ SY DM+ A+ KLD
Sbjct: 2 YRLRVENLSSRCSWQDLKDFMRQAGEVTYADAHQRRQN-EGVIEFRSYSDMRRALEKLDG 60
Query: 143 SEF 145
SE
Sbjct: 61 SEI 63
>gi|313212059|emb|CBY17785.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 12/146 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + I L+ Y F++F+D RDAEDAI+ DG + G R+R+ELA+ R S
Sbjct: 28 YGKVTQIRLR-----DRYGFVDFDDRRDAEDAIKDLDGSSLCGERVRLELANRSRGSRRS 82
Query: 63 MDRYSSYSSGGSRGVS-------RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
R G G R+ + + V L S SW DLKD MR+AG+V ++
Sbjct: 83 GSRDRGRRGGDRGGDERRGSNRPHRTRFTLEVENLSSRVSWADLKDMMRKAGEVTYTDAH 142
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLD 141
+ G G V + + +D++ A +K D
Sbjct: 143 QRMGKNRGEVCFANSEDLRAAYKKFD 168
>gi|221056122|ref|XP_002259199.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193809270|emb|CAQ39972.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 206
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 3 YGPIVDIDLKIPPRPPG--YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
+G I ID+K G YAF+E+E+Y A+ ++ ++G NF G L+VE + +
Sbjct: 31 FGKITGIDIKYNRNANGTNYAFIEYENYESAKKTVQKKNGQNFMGNMLKVEYTNDKKNKE 90
Query: 61 SSMDRYSSYSSGG----SRGVSRRSDYRVLVTGLPSSASWQD-LKDHMRRAGDVCFSQVF 115
+ G R RS+YRV+V P D +K + +AG V +Q+
Sbjct: 91 GHIIPVGKEKLKGFMRNLRLPRNRSNYRVVVKNFPKRKIQLDYVKKFLMKAGKVIHTQLE 150
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 156
+ I +Y S + M A+ LDR+ + N S+ YVRV
Sbjct: 151 DE----ITIAEYDSKEGMLRAVNTLDRTLYNNR-SKVYVRV 186
>gi|432898455|ref|XP_004076510.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 222
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 39/50 (78%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YG I DIDLK P +AF++FED RDAEDA+ GRDGY++DGYRLRVE
Sbjct: 38 YGSIRDIDLKNRRGGPPFAFVQFEDPRDAEDAVYGRDGYDYDGYRLRVEF 87
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
Query: 110 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 157
C++ VFRD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 114 CYADVFRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 159
>gi|268533694|ref|XP_002631976.1| Hypothetical protein CBG10243 [Caenorhabditis briggsae]
Length = 545
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 18 PGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH-GGRRHSSSM-----DRYSSYSS 71
PGY F+EF DAE A++ R+G+ +RVE + GG R M + YS
Sbjct: 210 PGYGFMEFVKLEDAEKAVKTRNGFPICDKFIRVEFSTSGGPRGPGGMVLREGEISEEYSV 269
Query: 72 G-GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGD-----VCFSQVFRDRGGMTGIV 125
G G RS +RV V P S +WQD+KD R D VCFS + + V
Sbjct: 270 ARGRGGPQLRSVHRVYVDNCPPSTTWQDIKDLFRGKNDPTGIEVCFSAI--NPIQRRAFV 327
Query: 126 DYTSYDDMKYAIRKLDRSEFRN 147
++ +D+ AIR + N
Sbjct: 328 EFRLKEDVAKAIRLFHNKPYIN 349
>gi|242023192|ref|XP_002432020.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
gi|212517371|gb|EEB19282.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
Length = 132
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R RVE++ G RH S+
Sbjct: 34 YGPLRNV--WVARNPPGFAFIEFEDPRDAEDAVRGLDGSRMCGTRARVEMSSGRTRHRSA 91
Query: 63 MD 64
++
Sbjct: 92 LE 93
>gi|354548311|emb|CCE45047.1| hypothetical protein CPAR2_700510 [Candida parapsilosis]
Length = 272
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 30/144 (20%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
P+V++ L GYAF+ F+ +A+ A++ DG +G +L+VE A
Sbjct: 31 APVVEVRLM-----QGYAFVSFQTEDEADAALKKMDGQELNGEQLQVEFAK--------- 76
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMR-RAG-DVCFSQVFRDRGGM 121
++ +RV +TGL +WQD+KD +R + G + F +VF + G
Sbjct: 77 --------------PKKEVHRVKLTGLIDGTAWQDIKDFVRDKTGTEPSFVRVFTNESGT 122
Query: 122 TGIVDYTSYDDMKYAIRKLDRSEF 145
+ + S DD++ AI LD+S F
Sbjct: 123 VCDLQFESRDDLEKAIPLLDKSTF 146
>gi|148669916|gb|EDL01863.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_a
[Mus musculus]
gi|149053806|gb|EDM05623.1| rCG34610, isoform CRA_b [Rattus norvegicus]
Length = 168
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 39/50 (78%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YG I DIDLK P +AF+EFED RDAEDA+ GRDGY++DGYRLRVE
Sbjct: 39 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|344229776|gb|EGV61661.1| hypothetical protein CANTEDRAFT_135600 [Candida tenuis ATCC 10573]
Length = 228
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVS 78
GYAF+ FE+ A+ A+ + +F G L VELA R
Sbjct: 69 GYAFVSFEEDGAAQKAVDEFNNTDFHGQPLIVELAR-------------------ERKED 109
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMR-RAGDV-CFSQVFR--DRGGMTGIVDYTSYDDMK 134
R YRV VT LP +WQD KD +R + G F++V+R D G + G +++ + D+++
Sbjct: 110 TRGKYRVKVTNLPDGTAWQDFKDFVRDKTGTTPTFAKVYRDYDSGEVIGALEFGARDELE 169
Query: 135 YAIRKLDRSEFRNA 148
AI L+ SEF+ A
Sbjct: 170 GAIPVLNGSEFQGA 183
>gi|346467797|gb|AEO33743.1| hypothetical protein [Amblyomma maculatum]
Length = 239
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 52 LAHGGRRHSSSMDRYSSYSSGGS-----RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRA 106
LA G RR + D Y S ++ S G R++Y++ V L S SWQDLKD+MR+A
Sbjct: 1 LARGIRRGA---DYYRSRAASRSPPRRRYGPPTRTEYQLTVENLSSRVSWQDLKDYMRQA 57
Query: 107 GDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
G+V ++ R R G+V++ +Y DMK A+ KLD ++
Sbjct: 58 GEVTYADAHRLRRN-EGVVEFATYSDMKNALEKLDNTDL 95
>gi|391339441|ref|XP_003744058.1| PREDICTED: uncharacterized protein LOC100905097 [Metaseiulus
occidentalis]
Length = 355
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYS-----SGG 73
YAF+EF D RDA DAI +G ++ G R+ VELA+ RR S +
Sbjct: 37 NYAFVEFADERDARDAISELNGTSWKGERIIVELANRRRRSRSQSGDRRGRNPRRKPGRI 96
Query: 74 SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDM 133
+RG RR+DY++ + L + SWQDLKD V ++ R GIV++ + ++M
Sbjct: 97 TRGPPRRTDYQISIKNLSTRVSWQDLKDIFGEVAKVVYADAHNKRRNY-GIVEFDTKEEM 155
Query: 134 KYAIRKLDRSEF 145
K + F
Sbjct: 156 NRCYEKFNGKSF 167
>gi|324526478|gb|ADY48681.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 158
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 40/61 (65%), Gaps = 7/61 (11%)
Query: 16 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR 75
RPPG+AF+EFED RDAEDA+R DG G R RVEL+HG RR+ + GGSR
Sbjct: 44 RPPGFAFIEFEDSRDAEDAVRALDGTRICGVRARVELSHGRRRNGAP-------DYGGSR 96
Query: 76 G 76
G
Sbjct: 97 G 97
>gi|392577928|gb|EIW71056.1| hypothetical protein TREMEDRAFT_56308 [Tremella mesenterica DSM
1558]
Length = 273
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS-SS 62
GPI+D+ + Y F+EFE RDAEDA+R +G + G + VE RR +
Sbjct: 28 GPILDVRIL-----GNYGFVEFESSRDAEDALRDYNGVSLLGENIIVEAPRERRRDAYGP 82
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGD-VCFSQVFRDRGGM 121
RG RR R+ V G+P S SWQDLKD+ R + V ++ V R G+
Sbjct: 83 GVGGYRGGDAPPRGPPRRG-VRINVVGIPGSTSWQDLKDYGRLGSNMVTYADVDRYNPGV 141
Query: 122 TGIVDYTSYDDMKYAIRKL 140
G+++Y + + + A+ +L
Sbjct: 142 -GVIEYPTMGEAEEAMSRL 159
>gi|448534987|ref|XP_003870881.1| Npl3 RNA-binding protein [Candida orthopsilosis Co 90-125]
gi|380355237|emb|CCG24753.1| Npl3 RNA-binding protein [Candida orthopsilosis]
Length = 282
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 28/149 (18%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
P+V++ L GYAFL F++ DA +A+ G +F +L+VE A
Sbjct: 31 APVVEVRLM-----EGYAFLTFDNESDAGEALSKFAGTDFRDEQLQVEFAK--------- 76
Query: 64 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMR--RAGDVCFSQVFR--DRG 119
R R YR+ +TGLP +WQD+KD +R + F +VFR D G
Sbjct: 77 ----------ERKEDTRGKYRLKITGLPEGTAWQDVKDFVRDKTGTEANFVRVFRDYDSG 126
Query: 120 GMTGIVDYTSYDDMKYAIRKLDRSEFRNA 148
+ + + +D++ +I LD++ F A
Sbjct: 127 DTICSLQFETGEDLEKSIPLLDKANFGEA 155
>gi|221480768|gb|EEE19199.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
GT1]
Length = 1335
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 78 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM-TGIVDYTSYDDMKYA 136
+R +RV+ L WQDLKD R AG+V F+ V ++ G+ GI++Y S +DM+ A
Sbjct: 316 GKRLPFRVVCHNLDPRVHWQDLKDFGREAGEVNFTNVLHNQEGVRIGIIEYCSQEDMETA 375
Query: 137 IRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 196
+ +LD +A V VR ++ SY P ++ S P S R PS
Sbjct: 376 LHELDGKRLFDA----RVEVRREEANASY-------PSFAEISSSLPPDSLIRPPSGRAP 424
Query: 197 YSPRSRSYSPRGKYSRRS 214
P+ S RG R S
Sbjct: 425 PGPKGASCRARGPPLRAS 442
>gi|221501413|gb|EEE27190.1| cold-inducible RNA binding protein, putative [Toxoplasma gondii
VEG]
Length = 1335
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 78 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM-TGIVDYTSYDDMKYA 136
+R +RV+ L WQDLKD R AG+V F+ V ++ G+ GI++Y S +DM+ A
Sbjct: 316 GKRLPFRVVCHNLDPRVHWQDLKDFGREAGEVNFTNVLHNQEGVRIGIIEYCSQEDMETA 375
Query: 137 IRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 196
+ +LD +A V VR ++ SY P ++ S P S R PS
Sbjct: 376 LHELDGKRLFDA----RVEVRREEANASY-------PSFAEISSSLPPDSLIRPPSGRAP 424
Query: 197 YSPRSRSYSPRGKYSRRS 214
P+ S RG R S
Sbjct: 425 PGPKGASCRARGPPLRAS 442
>gi|148298845|ref|NP_001091768.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|95103084|gb|ABF51483.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|102269217|gb|ABF55972.2| xl6 [Bombyx mori]
Length = 176
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R RVE+++GGR + S
Sbjct: 30 YGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGRTICGRRARVEMSNGGRGYGS 86
>gi|237845207|ref|XP_002371901.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211969565|gb|EEB04761.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
Length = 1335
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 78 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM-TGIVDYTSYDDMKYA 136
+R +RV+ L WQDLKD R AG+V F+ V ++ G+ GI++Y S +DM+ A
Sbjct: 316 GKRLPFRVVCHNLDPRVHWQDLKDFGREAGEVNFTNVLHNQEGVRIGIIEYCSQEDMETA 375
Query: 137 IRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 196
+ +LD +A V VR ++ SY P ++ S P S R PS
Sbjct: 376 LHELDGKRLFDA----RVEVRREEANASY-------PSFAEISSSLPPDSLIRPPSGRAP 424
Query: 197 YSPRSRSYSPRGKYSRRS 214
P+ S RG R S
Sbjct: 425 PGPKGASCRARGPPLRAS 442
>gi|307187926|gb|EFN72839.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 213
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ +I + PPG+AF+EFED RDAEDA+RG DG + G R+RVE+
Sbjct: 34 YGPLRNI--WVARNPPGFAFVEFEDPRDAEDAVRGLDGVHLCGTRVRVEM 81
>gi|449017556|dbj|BAM80958.1| similar to Gbp1p protein [Cyanidioschyzon merolae strain 10D]
Length = 293
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 84 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT---GIVDYTSYDDMKYAIRKL 140
RV V L S SWQ LKDHMR+AG+V F++VF +R G + G+V+Y + D AI L
Sbjct: 95 RVYVGNLAWSVSWQALKDHMRKAGEVVFAEVFTERDGRSRGCGVVEYATEADSANAIATL 154
Query: 141 DRSEFR 146
+ +E +
Sbjct: 155 NDTELQ 160
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 84 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT---GIVDYTSYDDMKYAIRKL 140
+++V LP S +WQDLKD R G++ + + D+ G + G + + S +D + AI+ +
Sbjct: 216 KIIVWNLPYSYTWQDLKDEFRACGNIIRADILIDQEGRSRGAGTIVFESEEDAQRAIQMM 275
Query: 141 DRSEF 145
DR+E
Sbjct: 276 DRAEL 280
>gi|321263009|ref|XP_003196223.1| mRNA binding protein [Cryptococcus gattii WM276]
gi|317462698|gb|ADV24436.1| mRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 275
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR 79
+ F+EF+ RDAEDA+ +G G + VE RR D Y R
Sbjct: 37 FGFVEFDSPRDAEDAVHEFNGKPLLGESIVVEPTRESRRR----DPYEQ-----PRPRPS 87
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R R+ V+G S+ SWQDLKD+ R G+ R G+++Y + ++ + AIR+
Sbjct: 88 RRGVRINVSGFSSATSWQDLKDYGRLGGNTIIYADVDKRNPGHGVIEYRNMEEAQEAIRR 147
Query: 140 LDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSR 187
L + A + E + R + R P Y R+ YY R
Sbjct: 148 LAGVDINGAPVTLEIAPAEAEFDRDFDRRPPPPRDYDDRRAPRDYYDR 195
>gi|62089194|dbj|BAD93041.1| CS0DF038YO05 variant [Homo sapiens]
Length = 326
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 81/200 (40%), Gaps = 63/200 (31%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DIDLK G+ F+EFED RDA+DA+ DG R+ +E A R
Sbjct: 30 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRG 84
Query: 63 MDRYSS-YSSGGSRGVSR-----RSDYRVLVTGLPSSASWQ------------------- 97
RYS +SS R R R++ R++V L S SWQ
Sbjct: 85 RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQVCILIEYKCGKCHVCTLSN 144
Query: 98 --------------------------------DLKDHMRRAGDVCFSQVFRDRGGMTGIV 125
DLKD MR+AG+V F+ R + G+V
Sbjct: 145 IFSFSSLVFFISCDCLCVPFPLLCLTQLSCVKDLKDFMRQAGEVTFADAHRPKLN-EGVV 203
Query: 126 DYTSYDDMKYAIRKLDRSEF 145
++ SY D+K AI KL E
Sbjct: 204 EFASYGDLKNAIEKLSGKEI 223
>gi|223649236|gb|ACN11376.1| Splicing factor, arginine/serine-rich 6 [Salmo salar]
Length = 266
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ S DM+ A+ K
Sbjct: 40 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFGSRSDMRRALDK 98
Query: 140 LDRSEF 145
LD ++
Sbjct: 99 LDGTDI 104
>gi|262401189|gb|ACY66497.1| splicing factor arginine/serine-rich 7 [Scylla paramamosain]
Length = 119
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH 59
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R+
Sbjct: 30 YGPLRNV--WVARNPPGFAFVEFEDVRDAEDAVRGLDGRTICGRRVRVELSTGKSRN 84
>gi|301118162|ref|XP_002906809.1| pre-mRNA-splicing factor SF2-like protein [Phytophthora infestans
T30-4]
gi|262108158|gb|EEY66210.1| pre-mRNA-splicing factor SF2-like protein [Phytophthora infestans
T30-4]
Length = 184
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 20/131 (15%)
Query: 39 DGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGG-------------SRGVSRRSDYRV 85
DG +F G R+RVELA GG R G R +R+D+RV
Sbjct: 2 DGRDFLGGRIRVELARGGSRRDGGGGGGGGGRRGDDDRHGRGGDRFERGRNPPQRTDFRV 61
Query: 86 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
VT LP W+++KD +R G+V + + D + I ++ + +DM+ A++KLD +EF
Sbjct: 62 RVTDLPRDVDWRNVKDFLRTGGEVTYCNIEAD---GSAIAEFQTKEDMEDAVKKLDDTEF 118
Query: 146 RNAFSRSYVRV 156
R SYVRV
Sbjct: 119 RG----SYVRV 125
>gi|440471047|gb|ELQ40084.1| hypothetical protein OOU_Y34scaffold00462g38 [Magnaporthe oryzae
Y34]
Length = 905
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 23/162 (14%)
Query: 4 GPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSM 63
G I +I L G+ F+E++D DA D + G F G RL V+ A G R
Sbjct: 616 GKITEIKLM-----NGFGFIEYDDPLDARDVVPAFHGSTFMGERLTVQFARGTRNREGGS 670
Query: 64 DRYSSYSSGGSRGVS--------RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 115
GG G RR+ +R+ ++GLP SWQ DV +S+
Sbjct: 671 GGGGGGGGGGGGGYGGERSGPRPRRTAFRMQISGLPVDTSWQ---------LDVVYSETG 721
Query: 116 RDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVR 157
R+ G G V++ + D+ A+ LD EF++ R +
Sbjct: 722 RNNNG-EGFVEFETAADLASAVEALDGKEFKDKIVRCVANTQ 762
>gi|413956954|gb|AFW89603.1| hypothetical protein ZEAMMB73_466141 [Zea mays]
Length = 201
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 30/38 (78%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR 57
A + FED D +DAI GRDGYNFDGYRLRV+LAHG R
Sbjct: 32 VASVPFEDPHDVDDAIYGRDGYNFDGYRLRVDLAHGAR 69
>gi|399217969|emb|CCF74856.1| unnamed protein product [Babesia microti strain RI]
Length = 385
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR 79
+AF+E+ A DA+ +GY G +++V + HS + +RY
Sbjct: 208 FAFIEYHKPESASDALNQLNGYILHGEKIKV------KPHSDNSNRYREKVPPPRH---- 257
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
+ Y V V + + SWQDLKD R AG+V ++ + G G+++Y + + K A+ +
Sbjct: 258 KPGYAVTVANIEETTSWQDLKDFGRLAGEVSYASIVIKDGKKYGVIEYLAPESAKNALVE 317
Query: 140 LDRSEFRN 147
L + N
Sbjct: 318 LQGKQITN 325
>gi|213514036|ref|NP_001133737.1| Splicing factor, arginine/serine-rich 6 [Salmo salar]
gi|209155158|gb|ACI33811.1| Splicing factor, arginine/serine-rich 6 [Salmo salar]
Length = 261
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ S DM+ A+ K
Sbjct: 37 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFGSRSDMRRALDK 95
Query: 140 LDRSEF 145
LD ++
Sbjct: 96 LDGTDI 101
>gi|268531974|ref|XP_002631115.1| C. briggsae CBR-RSP-1 protein [Caenorhabditis briggsae]
Length = 304
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 76/165 (46%), Gaps = 33/165 (20%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH-------- 54
YG I D+ LK G+ F+EF+D RDAEDA+ +G G R+ ++ +
Sbjct: 26 YGQIRDVLLK-----NGFGFVEFDDKRDAEDAVHDLNGKELGGDRVILDYSKPRGGGGSG 80
Query: 55 GGRRHSSSMDRYSSYSSGG--------SRGVSRRSD---------YRVLVTGLPSSASWQ 97
GG R SSYS GG RG RR +RVLV L S SWQ
Sbjct: 81 GGYGDRRGGGRVSSYSGGGGRDRFDRYDRGPPRRESRYGRPYSTRHRVLVENLSSRISWQ 140
Query: 98 DLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 141
DLKD +RR G + +++ + ++ + + D+K I K D
Sbjct: 141 DLKDQVRRQGVEPTYAEAHKRPN--EALLCFATPSDLKRCIDKCD 183
>gi|67624493|ref|XP_668529.1| ENSANGP00000021579 [Cryptosporidium hominis TU502]
gi|54659743|gb|EAL38308.1| ENSANGP00000021579 [Cryptosporidium hominis]
Length = 329
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 17/141 (12%)
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R +RV V L +ASW+DLKD+ R+ G+V +S VF +G G+V+Y + ++MK A+ +
Sbjct: 28 RKHFRVCVFNLDDNASWRDLKDYGRQIGEVNYSAVFHYQGQKVGVVEYLTVEEMKRALEE 87
Query: 140 LDRSEFRNAFSRSYVRVREYDSRRSYS-------RSP---SRSPYYSRSRSRSPYYS--- 186
+ F R + + D + + RSP S PY + R+R Y S
Sbjct: 88 IPNLPFLGKSIRVEEDIGQLDRELAAANGYGAKRRSPPPFSSGPYNTGGRARGRYPSPSR 147
Query: 187 ---RSRSPSRSWSYSPRSRSY 204
RSRSP R Y R RS+
Sbjct: 148 FRMRSRSPRRD-PYDRRERSH 167
>gi|405122601|gb|AFR97367.1| mRNA binding protein [Cryptococcus neoformans var. grubii H99]
Length = 274
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSRGVSR 79
+ F+EF+ RDAEDA+ +G G + VE RR D Y R
Sbjct: 37 FGFVEFDSPRDAEDAVHEFNGKPLLGESIVVEPTRESRRR----DPYEQ-----PRPRPS 87
Query: 80 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 139
R R+ V+G S+ SWQDLKD+ R G+ R G+++Y + ++ + AIR+
Sbjct: 88 RRGVRINVSGFSSATSWQDLKDYGRLGGNTIIYADVDKRNPGHGVIEYRNMEEAQEAIRR 147
Query: 140 LDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSR 187
L + A + E + R + R P Y R R YY R
Sbjct: 148 LAGVDINGAPVTLEIAPAEPEFDREFDRRPPPRDYDDRRAPRD-YYDR 194
>gi|55926178|ref|NP_001007487.1| serine/arginine-rich splicing factor 7 [Xenopus (Silurana)
tropicalis]
gi|51262158|gb|AAH79925.1| splicing factor, arginine/serine-rich 7, 35kDa [Xenopus
(Silurana) tropicalis]
Length = 234
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|225706912|gb|ACO09302.1| Splicing factor, arginine/serine-rich 7 [Osmerus mordax]
Length = 208
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + + PPG+AF+E+ED RDAEDA++G DG G R+RVEL+ G R S
Sbjct: 38 YGPLRSV--WVARNPPGFAFVEYEDTRDAEDAVKGMDGKVLCGARIRVELSTGMSRKS 93
>gi|45387765|ref|NP_991236.1| splicing factor, arginine/serine-rich 7 [Danio rerio]
gi|41350982|gb|AAH65586.1| Zgc:77155 [Danio rerio]
Length = 258
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + + PPG+AF+E+ED RDAEDA++G DG G R+RVEL++G R S
Sbjct: 37 YGPLRSV--WVARNPPGFAFVEYEDARDAEDAVKGMDGKVLCGARVRVELSNGMSRKS 92
>gi|255564609|ref|XP_002523299.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537387|gb|EEF39015.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 259
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 31/200 (15%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNF--DGYRLRVELAHGGR-RH 59
YG + +D+K G+AF+ FED RDA DAIRG D +F D +L VE A G R RH
Sbjct: 26 YGRVERVDMK-----SGFAFVYFEDERDAADAIRGLDNISFGYDRRKLSVEWARGERGRH 80
Query: 60 SSSMDRYSSYSSGGSRGVSRRSDYRVL--VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 117
GSR ++ + + L + P +D+K H R G+V ++ R+
Sbjct: 81 RD-----------GSRSMANQRPTKTLFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRN 129
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSR 177
V + + +D A+ ++ + +R+ R S SP R +Y R
Sbjct: 130 ----FAFVQFETQEDATKALECTHMTKILDRVVSVEYALRDDSERGDKSDSPRRGSHYGR 185
Query: 178 S------RSRSPYYSRSRSP 191
S R SP Y R+RSP
Sbjct: 186 SPSPVYRRRPSPDYGRARSP 205
>gi|389608975|dbj|BAM18099.1| hypothetical protein [Papilio xuthus]
Length = 145
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR 57
YGP+ ++ + PPG+AF+EFED RDAEDAIRG DG G R RVE+++G R
Sbjct: 30 YGPLRNV--WVARNPPGFAFVEFEDPRDAEDAIRGLDGRTICGRRARVEMSNGSR 82
>gi|401403100|ref|XP_003881410.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325115822|emb|CBZ51377.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 1255
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM-TGIVDYTSYDDMKYAI 137
+R +RV+ L WQDLKD R AG+V F+ V ++ G+ GI++Y S +DM+ A+
Sbjct: 320 KRLPFRVVCHNLDPRVHWQDLKDFGREAGEVNFTNVLHNQDGLRIGIIEYCSQEDMETAL 379
Query: 138 RKLDRSEFRNAFSRSYVRVREYDSRRSY 165
R+L+ +A V VR ++ SY
Sbjct: 380 RELNGRRLFDA----RVEVRREEANASY 403
>gi|294653211|gb|ADF28513.1| rbp1-like RNA-binding protein PB [Pelinobius muticus]
Length = 134
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
YGPI ++ + PPG+AF+EFED RDAEDA++ DG G R+RVE++H
Sbjct: 34 YGPIRNV--WVARNPPGFAFVEFEDSRDAEDAVKALDGTRICGARVRVEMSH 83
>gi|225712010|gb|ACO11851.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH 59
YGP+ ++ + PPG+AF+EFED RDAED++RG DG G R+RVE++ G R+
Sbjct: 34 YGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGTRVCGQRVRVEMSSGQSRN 88
>gi|58260304|ref|XP_567562.1| mRNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134116248|ref|XP_773078.1| hypothetical protein CNBJ0730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255699|gb|EAL18431.1| hypothetical protein CNBJ0730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229612|gb|AAW46045.1| mRNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 274
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 76/173 (43%), Gaps = 30/173 (17%)
Query: 20 YAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSSYSSGGSR-GVS 78
+ F+EF+ RDAEDA+ +G G + VE RR D Y SR GV
Sbjct: 37 FGFVEFDSPRDAEDAVHEFNGKPLLGESIVVEPTRESRRR----DPYEQPRPRPSRRGV- 91
Query: 79 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 138
R+ V+G S SWQDLKD+ R G+ R G+++Y + ++ + AIR
Sbjct: 92 -----RINVSGFSSETSWQDLKDYGRLGGNTIIYADVDKRNPGHGVIEYRNMEEAQEAIR 146
Query: 139 KLDRSEFRNA------------FSRSYVR---VREYDSRRS----YSRSPSRS 172
+L + A F R + R R+YD RR+ Y R P R
Sbjct: 147 RLAGVDINGAPVTLEIAPADPEFDREFDRRPPPRDYDDRRAPRDYYDRPPPRD 199
>gi|432114048|gb|ELK36095.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Myotis
davidii]
Length = 628
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 43 YGPLRSV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 98
>gi|393904919|gb|EJD73832.1| hypothetical protein LOAG_18772 [Loa loa]
Length = 199
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 16 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
RPPG+AF+EFED RDAEDA++ DG G R RVE++H
Sbjct: 44 RPPGFAFVEFEDARDAEDAVKALDGTRICGVRARVEISH 82
>gi|325179817|emb|CCA14220.1| RNA binding protein putative [Albugo laibachii Nc14]
Length = 360
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 21/149 (14%)
Query: 9 IDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSSMDRYSS 68
+ +++ R G + + +A++AI + DG ++ V DR +
Sbjct: 100 VIMEVGGRSKGCGIVTYATESEAQNAIETLNDTELDGRKIFV-----------REDREEN 148
Query: 69 YSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT---GIV 125
S+ R RV V LP + WQ LKDHM++AG V + V + GG + G+V
Sbjct: 149 ASA-----QPRAKGCRVYVGNLPWTVKWQALKDHMKQAGTVIHADVLEEAGGWSKGCGLV 203
Query: 126 DYTSYDDMKYAIRKLDRSEF--RNAFSRS 152
++++ D+ + AI L+ +E RN F R
Sbjct: 204 EFSTPDEAQNAIDMLNDTELEGRNIFVRE 232
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 56 GRRHSSSMDRYSSYSSGGSRGVSRR--SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 113
G ++ D + +S GS + RV V L WQDLKDHMR AGDV +
Sbjct: 41 GNAQNTHQDDHDDENSDGSEDADMEVVTGRRVYVGNLSWKVKWQDLKDHMRSAGDVEHA- 99
Query: 114 VFRDRGG---MTGIVDYTSYDDMKYAIRKLDRSEF--RNAFSRS 152
V + GG GIV Y + + + AI L+ +E R F R
Sbjct: 100 VIMEVGGRSKGCGIVTYATESEAQNAIETLNDTELDGRKIFVRE 143
>gi|322801941|gb|EFZ22488.1| hypothetical protein SINV_01609 [Solenopsis invicta]
Length = 289
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R+RVE+
Sbjct: 61 YGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEM 108
>gi|221122641|ref|XP_002154006.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Hydra
magnipapillata]
Length = 259
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 18/155 (11%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I DI +K GYAF++F+DYRDA+DA+ +G G R+ +E A G R S
Sbjct: 25 YGKIRDIMMK-----NGYAFVDFDDYRDADDAVYDLNGKELMGDRVIIEHAKGIERGSGG 79
Query: 63 M----DRYSSYSSGGSR--------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC 110
+R+ SG R G R+ + + V L S SWQDLKD+ R +V
Sbjct: 80 APYGRERFKDDRSGFGRKQRARDKYGPPVRTKWMLRVENLSSRVSWQDLKDYCRPHAEVT 139
Query: 111 FSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
++ R G+ I ++Y+DMK IRK+D +E
Sbjct: 140 YADAHRKERGVACIC-TSTYEDMKNLIRKIDNTEL 173
>gi|172046468|emb|CAQ34906.1| SR family splicing factor 9G8 [Chironomus tentans]
Length = 216
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YGP+ + + PPG+AF+EFED RDAEDA+RG DG G R RVEL+ G
Sbjct: 37 YGPLRSV--WVARNPPGFAFVEFEDARDAEDAVRGLDGRTICGRRARVELSTG 87
>gi|403221560|dbj|BAM39693.1| uncharacterized protein TOT_010001366 [Theileria orientalis strain
Shintoku]
Length = 458
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+GPI ID + +AF++F +DAE AIR G L+V+ H
Sbjct: 269 FGPINRIDFR-----RKFAFVDFVRSKDAETAIREMHNKLIWGSWLKVQP------HIEQ 317
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
+ S+ + Y++ VT L S SWQDLKD R+AG+V ++ +
Sbjct: 318 QKKLSAREP--------KPGYQITVTNLDQSVSWQDLKDFARQAGEVNYASIIIKGNKRF 369
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREY 159
G++++T+ + ++ A++ L+ + N +V V E+
Sbjct: 370 GLIEFTNDESVQNALKDLNGKKIDVNKLELIHVPVSEF 407
>gi|353241704|emb|CCA73501.1| related to pre-mrna splicing factor srp55 [Piriformospora indica
DSM 11827]
Length = 194
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 19/147 (12%)
Query: 19 GYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGG--RRHSSSMDRYSSYSSGGSRG 76
G+ F+EF+ D + A+R DG++F G + V++A RR R SSG +G
Sbjct: 39 GFGFIEFDSSEDMDTALR-LDGHDFQGQPILVQVAREKPPRREPPREMR----SSGRRQG 93
Query: 77 VSRRSDYRVLVTGLPSSASWQDLKDHMRRA-GDVCFSQVFRDRGGMTGIVDYTSYDDMKY 135
V+ V+V+ + SWQDLKD R A G V FS + RD GI++Y + ++ +
Sbjct: 94 VT------VIVSNVSRDVSWQDLKDFGREAGGGVIFSDIDRDVPNQ-GILEYYTAEEAER 146
Query: 136 AIRKLDRSEFRNAFSRSYVRVREYDSR 162
A+R+LD E R V +R DSR
Sbjct: 147 AVRELDGRELRG----HTVTLRLQDSR 169
>gi|157874667|ref|XP_001685752.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|68128825|emb|CAJ05906.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 351
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 76 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 135
GV + RV V+GL +W LKDH+R+AGD+ F ++F G G+V++ +D
Sbjct: 225 GVKKLVGQRVQVSGLSDETTWHTLKDHLRQAGDITFCRLFS---GGRGMVEFAVPEDAAR 281
Query: 136 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSR 189
I +L SE A Y+R D+ +R R S+ R+R +SR
Sbjct: 282 CITELQASELEGA--TLYLREDREDTVLINTRRKIRDARDSQLRARKAEAEKSR 333
>gi|290561220|gb|ADD38012.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH 59
YGP+ ++ + PPG+AF+EFED RDAED++RG DG G R+RVE++ G R+
Sbjct: 34 YGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGTRVCGQRVRVEMSSGQSRN 88
>gi|189241002|ref|XP_968789.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 200
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YGP+ ++ + PPG+AF+EFED RDAEDAIRG DG G R RVE+++G
Sbjct: 31 YGPLRNV--WVARNPPGFAFVEFEDARDAEDAIRGLDGRTICGRRARVEMSNG 81
>gi|270012981|gb|EFA09429.1| hypothetical protein TcasGA2_TC010640 [Tribolium castaneum]
Length = 202
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YGP+ ++ + PPG+AF+EFED RDAEDAIRG DG G R RVE+++G
Sbjct: 31 YGPLRNV--WVARNPPGFAFVEFEDARDAEDAIRGLDGRTICGRRARVEMSNG 81
>gi|395328918|gb|EJF61308.1| hypothetical protein DICSQDRAFT_170461 [Dichomitus squalens
LYAD-421 SS1]
Length = 224
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 2 MYGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
+YG I +I L+ PG+ F++FE R+ +R F G+ + V+LA R S
Sbjct: 26 VYGRITEIKLR-----PGFGFVQFEHRREV---VRAFSNQPFLGFAINVQLARPERYARS 77
Query: 62 SMDRYSSYSSGGS---RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRA-GDVCFSQVFRD 117
Y S+ + + ++ Y V+V GL WQ+LKD R G+V F V +D
Sbjct: 78 PELEYEPPSAPPAYHQQDRPKKMRYAVVVNGLDPRTCWQELKDFGRSVGGEVAFCDVDKD 137
Query: 118 RGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSR 177
G ++YT +D A+R+LD + + VR++ S R Y+ P + R
Sbjct: 138 H-RTRGWLNYTQEEDANRAVRELDGTRLLG----NVVRLQRQAS-RPYALCPREAAVCGR 191
Query: 178 SRSRSPYYSRSR---SPSRSWSYSPRSRSYSP 206
+ + S R P+ + + R R SP
Sbjct: 192 ADTHSTVAVSQRRRVQPTHAEGGAVRVRVPSP 223
>gi|146097473|ref|XP_001468113.1| HNRNPA [Leishmania infantum JPCM5]
gi|134072480|emb|CAM71191.1| HNRNPA [Leishmania infantum JPCM5]
Length = 327
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 76 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 135
GV + RV V+GL +W LKDH+R+AGD+ F ++F G G+V++ +D
Sbjct: 201 GVKKLVGQRVQVSGLSDETTWHTLKDHLRQAGDITFCRLFS---GGRGMVEFAVPEDAAR 257
Query: 136 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSR 189
I +L SE A Y+R D+ +R R ++ R+R +SR
Sbjct: 258 CITELQASELEGAT--LYLREDREDTVLINTRRKIRDARDAQLRARKAEAEKSR 309
>gi|440794423|gb|ELR15584.1| hypothetical protein ACA1_164640 [Acanthamoeba castellanii str.
Neff]
Length = 212
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 84 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAIRKL 140
RV V LP SWQDLKDHMR+AG+V + VF D G GIV+Y++ ++ + AI+ L
Sbjct: 26 RVYVGNLPWQTSWQDLKDHMRKAGNVTRADVFIDETGRSKGCGIVEYSTPEEAQNAIKTL 85
Query: 141 DRSEF 145
+ ++
Sbjct: 86 NDTKL 90
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 6/145 (4%)
Query: 8 DIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYR---LRVELAHGGRRHSSSMD 64
D+ + R G +E+ +A++AI+ + D A S++
Sbjct: 55 DVFIDETGRSKGCGIVEYSTPEEAQNAIKTLNDTKLDETERLIFSCPAAAAVWGEVWSVE 114
Query: 65 RYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT-- 122
+ + + V + LP + SWQDLKD R+AG++ + V D G +
Sbjct: 115 AVEAVEASTLTLILTLILILVFIGNLPYTTSWQDLKDRFRQAGNIIRADVLLDTTGRSKG 174
Query: 123 -GIVDYTSYDDMKYAIRKLDRSEFR 146
G V + S D + AIR D ++F+
Sbjct: 175 QGTVLFESPGDAQKAIRMFDNTDFQ 199
>gi|209155708|gb|ACI34086.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 129
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGKLISGSRVRVELSTG 84
>gi|170033187|ref|XP_001844460.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873739|gb|EDS37122.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 159
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YGP+ ++ + PPG+AF+EFED RDAEDA R DG G R+RVE++ G
Sbjct: 34 YGPLRNV--WVARNPPGFAFVEFEDKRDAEDACRSLDGQRCCGTRIRVEMSSG 84
>gi|270000727|gb|EEZ97174.1| hypothetical protein TcasGA2_TC004361 [Tribolium castaneum]
Length = 123
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R+RVE+++G R
Sbjct: 34 YGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEMSNGRSRRGGG 91
Query: 63 MDRYSSYSSG 72
YSSG
Sbjct: 92 RRGPMRYSSG 101
>gi|328724546|ref|XP_003248181.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Acyrthosiphon pisum]
gi|328724548|ref|XP_003248182.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 4
[Acyrthosiphon pisum]
Length = 137
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
YG I ++ + PPG+AF+EFED RDAEDA+RG DG + G R+RVEL++ G R +
Sbjct: 38 YGSIRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGRSICGRRVRVELSNAGSRKGA 94
>gi|341889018|gb|EGT44953.1| hypothetical protein CAEBREN_15444 [Caenorhabditis brenneri]
gi|341896973|gb|EGT52908.1| hypothetical protein CAEBREN_18115 [Caenorhabditis brenneri]
Length = 305
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH-------- 54
YG I D+ LK G+ F+EF+D RDAEDA+ +G G R+ ++ +
Sbjct: 26 YGNIRDVLLK-----NGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYSKPRGGGGFG 80
Query: 55 -------------GGRRHSSSMDRYSSYSSGG-SRGVSR-----RSDYRVLVTGLPSSAS 95
GG + DRY + GG R SR + +RVLV L S S
Sbjct: 81 GSGGRGGRVSSYSGG---AGGRDRYDRFDRGGPPRRESRYGRPYSTRHRVLVENLSSRIS 137
Query: 96 WQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 141
WQDLKD +RR G + +++ + ++ + + D+K I K D
Sbjct: 138 WQDLKDQVRRQGVEPTYAEAHKRPN--EALLCFATPSDLKRCIEKCD 182
>gi|353242017|emb|CCA73791.1| hypothetical protein PIIN_11698 [Piriformospora indica DSM 11827]
Length = 262
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 25 FEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR--------------RHSSSMDRYSSYS 70
F DAED +R +G NF G + VE A R R
Sbjct: 36 FATTHDAEDVVRNFNGKNFMGSEIIVEQAKDSRPKRGGYEDRGGGGYRGDGGHRGDRGGP 95
Query: 71 SGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSY 130
GG R R++VTG+ SWQDLKD R+AG+V F+ + RD G+++Y++
Sbjct: 96 GGGGGRPPRVPGIRLVVTGVSRDTSWQDLKDFARQAGNVTFADIDRDVPNQ-GVIEYSTR 154
Query: 131 DDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSR 171
++ AIR LD E R R + R YSR R
Sbjct: 155 EEADQAIRDLDGKEIRGTSVRVALDDRRGAVGGGYSRGSDR 195
>gi|254565225|ref|XP_002489723.1| RNA-binding protein that carries poly(A)+ mRNA from the nucleus
into the cytoplasm [Komagataella pastoris GS115]
gi|238029519|emb|CAY67442.1| RNA-binding protein that carries poly(A)+ mRNA from the nucleus
into the cytoplasm [Komagataella pastoris GS115]
gi|328350141|emb|CCA36541.1| Polyadenylate-binding protein 1-like [Komagataella pastoris CBS
7435]
Length = 329
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 25/141 (17%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+GPI ++ + GYAF+E+E+ DA A+ + F L++E A
Sbjct: 30 FGPIKEVKIMR-----GYAFVEYEEGADASAALENLNNTPFGDQDLQIEFAK-------- 76
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVC--FSQVFRDRGG 120
SY+ +R + RV VT +P S +WQDLKD + + D+ F+++ R
Sbjct: 77 --EKPSYA--------KRGENRVKVTNIPESIAWQDLKDFIAKEIDILPTFARLNRHDEP 126
Query: 121 MTGIVDYTSYDDMKYAIRKLD 141
T +++ + ++++ A+ K++
Sbjct: 127 PTATLEFNNREELEAAVEKIN 147
>gi|193636560|ref|XP_001952396.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Acyrthosiphon pisum]
gi|328724544|ref|XP_003248180.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Acyrthosiphon pisum]
Length = 181
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
YG I ++ + PPG+AF+EFED RDAEDA+RG DG + G R+RVEL++ G R +
Sbjct: 38 YGSIRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGRSICGRRVRVELSNAGSRKGA 94
>gi|307187925|gb|EFN72838.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 101
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG + G R+RVE+
Sbjct: 34 YGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGIHLCGTRVRVEM 81
>gi|401427578|ref|XP_003878272.1| putative RNA binding protein rggm [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494520|emb|CBZ29822.1| putative RNA binding protein rggm [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 327
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 76 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 135
GV + RV V+GL +W LKDH+R+AGD+ F ++F G G+V++ +D
Sbjct: 201 GVKKLVGQRVQVSGLSDETTWHTLKDHLRQAGDITFCRLFS---GGRGMVEFAVPEDAAR 257
Query: 136 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSR 189
I +L SE A Y+R D+ +R R ++ R+R +SR
Sbjct: 258 CITELQASELEGA--TLYLREDREDTVLINTRRKIRDARDAQLRARKAEAEKSR 309
>gi|398021379|ref|XP_003863852.1| RNA binding protein rggm, putative [Leishmania donovani]
gi|322502086|emb|CBZ37169.1| RNA binding protein rggm, putative [Leishmania donovani]
Length = 279
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 76 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 135
GV + RV V+GL +W LKDH+R+AGD+ F ++F G G+V++ +D
Sbjct: 153 GVKKLVGQRVQVSGLSDETTWHTLKDHLRQAGDITFCRLF---SGGRGMVEFAVPEDAAR 209
Query: 136 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSR 189
I +L SE A Y+R D+ +R R ++ R+R +SR
Sbjct: 210 CITELQASELEGAT--LYLREDREDTVLINTRRKIRDARDAQLRARKAEAEKSR 261
>gi|147900017|ref|NP_001086749.1| serine/arginine-rich splicing factor 7 [Xenopus laevis]
gi|50603927|gb|AAH77393.1| MGC81677 protein [Xenopus laevis]
Length = 234
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|148223523|ref|NP_001086618.1| MGC78845 protein [Xenopus laevis]
gi|50603914|gb|AAH77185.1| MGC78845 protein [Xenopus laevis]
Length = 224
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|149422794|ref|XP_001506905.1| PREDICTED: serine/arginine-rich splicing factor 7-like, partial
[Ornithorhynchus anatinus]
Length = 228
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 24 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 79
>gi|308482317|ref|XP_003103362.1| hypothetical protein CRE_27700 [Caenorhabditis remanei]
gi|308260152|gb|EFP04105.1| hypothetical protein CRE_27700 [Caenorhabditis remanei]
Length = 201
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 61/144 (42%), Gaps = 58/144 (40%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + IDLK R P +AF+EF D+R+
Sbjct: 30 YGRVRYIDLK-TCRGPSFAFVEFSDHRN-------------------------------- 56
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
G R+ ++R+ VT LP W DLKD+M+ D+ F
Sbjct: 57 -------------GPQRKFNFRIRVTNLPRPTRWHDLKDYMQSIKDIVF----------- 92
Query: 123 GIVDYTSYDDMKYAIRKLDRSEFR 146
GIV++TSY D+KYAIRK D +FR
Sbjct: 93 GIVEFTSY-DVKYAIRKFDGRKFR 115
>gi|195394324|ref|XP_002055795.1| GJ10582 [Drosophila virilis]
gi|194142504|gb|EDW58907.1| GJ10582 [Drosophila virilis]
Length = 140
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YGP+ ++ I PPG+AF+EFED RDAEDA R DG G R+RVE++ G
Sbjct: 34 YGPLRNV--WIARNPPGFAFVEFEDRRDAEDATRALDGTRCCGTRIRVEMSSG 84
>gi|390457607|ref|XP_003731973.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Callithrix jacchus]
Length = 373
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
Y I D+DLK P PPG +DA+ G ++D +V G +
Sbjct: 49 YCTIRDMDLKNPRDPPGPLLSSV-----TQDAVYGLHSCDYDRCLTQV----GSPPNGLG 99
Query: 63 MDRYSSYSSGGSRG--VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 120
+ S S G G ++R S RV+V+ LP S Q+LK HM G V +++V+++
Sbjct: 100 TGQGGSESPQGFHGSPLTRWSXNRVVVSWLPPDGSXQELKXHMHETGGVYYAEVYQNG-- 157
Query: 121 MTGIVDYTSYDDMKYAIRKLDRSEFR 146
+G+++ +DM + RKLD ++FR
Sbjct: 158 -SGVMEDVKKEDMNFLARKLDNTKFR 182
>gi|158296825|ref|XP_317163.4| AGAP008303-PA [Anopheles gambiae str. PEST]
gi|157014898|gb|EAA12231.4| AGAP008303-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R RVEL
Sbjct: 31 YGPLRNV--WVARNPPGFAFVEFEDARDAEDAVRGLDGRTISGRRARVEL 78
>gi|148706561|gb|EDL38508.1| mCG17902, isoform CRA_g [Mus musculus]
Length = 165
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 62 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 117
>gi|148706557|gb|EDL38504.1| mCG17902, isoform CRA_c [Mus musculus]
Length = 266
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 62 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 117
>gi|222137596|gb|ACM45325.1| rbp1-like RNA-binding protein PB [Bombyx mori]
Length = 159
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG I ++ + PPG+AF+EFED RDAED++RG DG G R+RVE+++G R
Sbjct: 34 YGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEMSNGRTRR--- 88
Query: 63 MDRYSSYSSG 72
DR S +S+
Sbjct: 89 -DRRSIFSTN 97
>gi|313232321|emb|CBY09430.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG---GRRH 59
YGP+ I L + F++F +DA++A++ DG G R+R+E + G ++
Sbjct: 30 YGPLGGIRL-----MNNFGFIDFRKKKDAKEAVKELDGKKLKGARIRLEHSDGPGGSKKK 84
Query: 60 SSSMDRYSSYSSGGSRGVSRR---SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFR 116
D + GG + R + Y + V+ L + SW DLK+ MRRAG+V ++
Sbjct: 85 GEDYDAVNFPPIGGQSSMYERPYRTKYTISVSNLSTRFSWADLKNFMRRAGEVTYTDAHV 144
Query: 117 DRGGMTGIVDYTSYDDMKYAIRKLD 141
G G V + + A++KL+
Sbjct: 145 RSGEGNGEVCFKDRKGLYRAMQKLN 169
>gi|322787527|gb|EFZ13615.1| hypothetical protein SINV_15244 [Solenopsis invicta]
Length = 128
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R+RVEL++G
Sbjct: 33 YGPLHNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGRIVCGRRIRVELSNG 83
>gi|389615269|dbj|BAM20617.1| RNA-binding protein [Papilio polytes]
Length = 159
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YG I ++ + PPG+AF+EFED RDAED++RG DG G R+RVE+++G
Sbjct: 34 YGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 84
>gi|28629815|gb|AAO45173.1| splicing factor arginine/serine-rich 3 [Paralichthys olivaceus]
Length = 168
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
YGP+ + + PPG+AF+EFED RDA DA+R DG N G +LRVEL+ G +R S
Sbjct: 37 YGPLRSV--WVARNPPGFAFVEFEDPRDASDAVRELDGRNMCGCKLRVELSTGEKRSRS 93
>gi|346468811|gb|AEO34250.1| hypothetical protein [Amblyomma maculatum]
Length = 161
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ ++ + PPG+AF+EFED RDA DA+R DG G R+RVEL+ G R+S
Sbjct: 44 YGPLRNV--WVARSPPGFAFVEFEDARDARDAVRALDGKMLCGRRVRVELSTGKSRNS 99
>gi|225710746|gb|ACO11219.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 152
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YGP+ ++ + PPG+AF+EFED RDAED++RG DG G R+RVE++ G
Sbjct: 34 YGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGTRVCGQRVRVEMSSG 84
>gi|71162370|sp|Q8BL97.1|SRSF7_MOUSE RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|26337671|dbj|BAC32521.1| unnamed protein product [Mus musculus]
Length = 267
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 63 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 118
>gi|332027347|gb|EGI67431.1| RNA-binding protein 1 [Acromyrmex echinatior]
Length = 133
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R+RVE+
Sbjct: 34 YGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEM 81
>gi|70943756|ref|XP_741887.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520548|emb|CAH80503.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 562
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH-------- 54
YG I++I K +AF+E+ AE+AI +G ++ G L V+ H
Sbjct: 164 YGDIINIQWKRR-----FAFIEYSKPIYAENAIHEENGKHYMGEELSVQAHHLSPFKNSY 218
Query: 55 ----GGRRHSSSMD------RYS-SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHM 103
G ++ D +YS +YS + +++ R++V + SWQDLKD
Sbjct: 219 SGNYGNSYNNYKSDPRNYENKYSRNYSDNKFESIEKKNSLRIVVKNIDEKVSWQDLKDFG 278
Query: 104 RRAGDVCFSQVFRDRGGMT----GIVDYTSYDDMKYAIRKLDRSEF 145
R G V ++ V + G GI++Y +Y+ MK A+ L+ +F
Sbjct: 279 REVGSVNYANVIYNNNGNNKEWYGIIEYYNYETMKRAVEVLNGKKF 324
>gi|395508189|ref|XP_003758396.1| PREDICTED: uncharacterized protein LOC100934570 [Sarcophilus
harrisii]
Length = 235
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 36 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 91
>gi|70914441|ref|XP_731840.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56502128|emb|CAH84208.1| hypothetical protein PC300910.00.0 [Plasmodium chabaudi chabaudi]
Length = 97
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+G I+ D+K +AF+EFED RDA DAI+ +DG +F G +LRVE+ R +
Sbjct: 4 FGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGCDFGGNKLRVEVPFNARDNG-- 61
Query: 63 MDRYSSYSSG----GSRGVSRRSDYRVLVTGL 90
+YSS G GS+ SRR Y V V +
Sbjct: 62 --KYSSRGRGMMGRGSK--SRRGRYVVEVINI 89
>gi|383852334|ref|XP_003701683.1| PREDICTED: uncharacterized protein LOC100878663 [Megachile
rotundata]
Length = 263
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R+RVE+
Sbjct: 34 YGPLRNV--WVARNPPGFAFVEFEDSRDAEDAVRGLDGTRCCGTRVRVEM 81
>gi|307180295|gb|EFN68328.1| Splicing factor, arginine/serine-rich 7 [Camponotus floridanus]
Length = 156
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 32/39 (82%)
Query: 17 PPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
PPG+AF+EFED RDAEDA+RG DG G R+RVEL++G
Sbjct: 46 PPGFAFVEFEDPRDAEDAVRGLDGRTLCGRRVRVELSNG 84
>gi|349802333|gb|AEQ16639.1| putative serine arginine-rich splicing factor 6 [Pipa carvalhoi]
Length = 93
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 89 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 145
L + SWQDLKD MRRAG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 2 NLSTRCSWQDLKDFMRRAGEVTYADAHKERTN-EGVIEFRSYSDMKRALEKLDGTEI 57
>gi|427795611|gb|JAA63257.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 127
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
+GP+ ++ + PPG+AF+EFED RDAEDA R DG G R+RVE++H
Sbjct: 50 FGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGSRLCGTRVRVEMSH 99
>gi|328908705|gb|AEB61020.1| serine/arginine-rich splicing factor 7-like protein [Equus
caballus]
Length = 238
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIAGNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|312371045|gb|EFR19313.1| hypothetical protein AND_22699 [Anopheles darlingi]
Length = 225
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA 53
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R RVEL+
Sbjct: 31 YGPLRNV--WVARNPPGFAFVEFEDARDAEDAVRGLDGRTISGRRARVELS 79
>gi|158285865|ref|XP_001687957.1| AGAP007325-PB [Anopheles gambiae str. PEST]
gi|157020194|gb|EDO64606.1| AGAP007325-PB [Anopheles gambiae str. PEST]
Length = 124
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YGP+ ++ + PPG+AF+EFED RDAEDA+R DG G R+RVE++ G
Sbjct: 34 YGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGTRCCGTRIRVEMSSG 84
>gi|118778182|ref|XP_308500.3| AGAP007325-PA [Anopheles gambiae str. PEST]
gi|116132260|gb|EAA04307.3| AGAP007325-PA [Anopheles gambiae str. PEST]
Length = 132
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YGP+ ++ + PPG+AF+EFED RDAEDA+R DG G R+RVE++ G
Sbjct: 34 YGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGTRCCGTRIRVEMSSG 84
>gi|410339103|gb|JAA38498.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410339105|gb|JAA38499.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|327262671|ref|XP_003216147.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Anolis carolinensis]
Length = 235
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|221220302|gb|ACM08812.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 256
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + + PPG+AF+E+ED RDAEDA +G DG G R+RVEL+ G R S
Sbjct: 38 YGPLRSV--WVARNPPGFAFVEYEDPRDAEDATKGMDGKVLCGSRIRVELSTGMSRKS 93
>gi|417397587|gb|JAA45827.1| Putative serine/arginine-rich splicing factor 7 [Desmodus
rotundus]
Length = 235
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|91094459|ref|XP_967049.1| PREDICTED: similar to AGAP007325-PA isoform 1 [Tribolium
castaneum]
Length = 129
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R+RVE+++
Sbjct: 34 YGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEMSN 83
>gi|346473483|gb|AEO36586.1| hypothetical protein [Amblyomma maculatum]
Length = 131
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
+GP+ ++ + PPG+AF+EFED RDAEDA R DG G R+RVE++H
Sbjct: 30 FGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGSRLCGTRVRVEMSH 79
>gi|20071765|gb|AAH27391.1| Sfrs7 protein [Mus musculus]
gi|148706560|gb|EDL38507.1| mCG17902, isoform CRA_f [Mus musculus]
Length = 157
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|26328639|dbj|BAC28058.1| unnamed protein product [Mus musculus]
Length = 157
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|91094467|ref|XP_976127.1| PREDICTED: similar to AGAP007325-PA isoform 5 [Tribolium
castaneum]
Length = 111
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R+RVE+++
Sbjct: 34 YGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEMSN 83
>gi|148706565|gb|EDL38512.1| mCG17902, isoform CRA_k [Mus musculus]
Length = 165
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 42 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 97
>gi|30584739|gb|AAP36622.1| Homo sapiens splicing factor, arginine/serine-rich 7, 35kDa
[synthetic construct]
gi|60653769|gb|AAX29578.1| splicing factor arginine/serine-rich 7 35kDa [synthetic
construct]
gi|60653771|gb|AAX29579.1| splicing factor arginine/serine-rich 7 35kDa [synthetic
construct]
Length = 239
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|242247509|ref|NP_001156211.1| serine/arginine-rich splicing factor 3-like [Acyrthosiphon pisum]
gi|239790491|dbj|BAH71803.1| ACYPI006320 [Acyrthosiphon pisum]
Length = 152
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA 53
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVE++
Sbjct: 33 YGPLKNT--WIARNPPGFAFVEFEDPRDAEDAVRGLDGTRICGVRVRVEMS 81
>gi|354488931|ref|XP_003506619.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Cricetulus griseus]
Length = 227
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 26 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 81
>gi|348574614|ref|XP_003473085.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Cavia porcellus]
Length = 227
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|297265846|ref|XP_002799299.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 4
[Macaca mulatta]
Length = 208
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|68534386|gb|AAH99175.1| Splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|149050598|gb|EDM02771.1| rCG61762, isoform CRA_a [Rattus norvegicus]
gi|149050599|gb|EDM02772.1| rCG61762, isoform CRA_a [Rattus norvegicus]
Length = 157
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|393904918|gb|EJD73831.1| hypothetical protein, variant [Loa loa]
Length = 145
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 16 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
RPPG+AF+EFED RDAEDA++ DG G R RVE++H
Sbjct: 44 RPPGFAFVEFEDARDAEDAVKALDGTRICGVRARVEISH 82
>gi|119389969|pdb|2HVZ|A Chain A, Solution Structure Of The Rrm Domain Of Sr Rich Factor
9g8
Length = 101
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 24 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 79
>gi|380815574|gb|AFE79661.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420741|gb|AFH33584.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948776|gb|AFI37993.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
Length = 235
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|72534660|ref|NP_001026854.1| serine/arginine-rich splicing factor 7 isoform 1 [Homo sapiens]
gi|307133718|ref|NP_001182515.1| splicing factor, arginine/serine-rich 7 [Macaca mulatta]
gi|307133726|ref|NP_001182519.1| splicing factor, arginine/serine-rich 7 [Pongo abelii]
gi|296224047|ref|XP_002757879.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Callithrix jacchus]
gi|332227248|ref|XP_003262805.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Nomascus leucogenys]
gi|332813155|ref|XP_515421.3| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
troglodytes]
gi|397493583|ref|XP_003817683.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Pan
paniscus]
gi|397493585|ref|XP_003817684.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
paniscus]
gi|402890618|ref|XP_003908580.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Papio anubis]
gi|403269672|ref|XP_003926840.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Saimiri boliviensis boliviensis]
gi|426335282|ref|XP_004029157.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Gorilla gorilla gorilla]
gi|3929380|sp|Q16629.1|SRSF7_HUMAN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor 9G8; AltName: Full=Splicing
factor, arginine/serine-rich 7
gi|506402|gb|AAA35495.1| 9G8 splicing factor [Homo sapiens]
gi|950424|gb|AAA88098.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|12654349|gb|AAH00997.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|16924200|gb|AAH17369.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|17389794|gb|AAH17908.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|18490620|gb|AAH22328.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|27369421|gb|AAN87842.1| arginine/serine-rich splicing factor 7 type B [Homo sapiens]
gi|30582329|gb|AAP35391.1| splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|46981983|gb|AAT08040.1| aging-associated protein 3 [Homo sapiens]
gi|61361883|gb|AAX42119.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|61361888|gb|AAX42120.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|62702176|gb|AAX93102.1| unknown [Homo sapiens]
gi|67970972|dbj|BAE01828.1| unnamed protein product [Macaca fascicularis]
gi|90076474|dbj|BAE87917.1| unnamed protein product [Macaca fascicularis]
gi|119620771|gb|EAX00366.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_d
[Homo sapiens]
gi|261858750|dbj|BAI45897.1| splicing factor, arginine/serine-rich 7, 35kDa [synthetic
construct]
gi|292698389|dbj|BAI99737.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|355565621|gb|EHH22050.1| hypothetical protein EGK_05239 [Macaca mulatta]
gi|355751260|gb|EHH55515.1| hypothetical protein EGM_04737 [Macaca fascicularis]
gi|380815572|gb|AFE79660.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420743|gb|AFH33585.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948778|gb|AFI37994.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|410213320|gb|JAA03879.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251182|gb|JAA13558.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299022|gb|JAA28111.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|307206112|gb|EFN84192.1| Splicing factor, arginine/serine-rich 7 [Harpegnathos saltator]
Length = 127
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 10 DLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR 57
++ + PPG+AF+EFED RDAEDA+RG DG G R RVEL++G R
Sbjct: 36 NVWVARHPPGFAFVEFEDPRDAEDAVRGLDGRTICGRRARVELSNGKR 83
>gi|148223201|ref|NP_001080460.1| serine/arginine-rich splicing factor 3 [Xenopus laevis]
gi|28302173|gb|AAH46661.1| Sfrs3-prov protein [Xenopus laevis]
Length = 191
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
YGP+ + + PPG+AF+EFED RDA DA+R DG G R+RVEL++G +R
Sbjct: 33 YGPLRSV--WVARNPPGFAFVEFEDLRDAADAVRELDGRTLCGCRVRVELSNGEKR 86
>gi|380012960|ref|XP_003690540.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 191
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R+RVE+
Sbjct: 65 YGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEM 112
>gi|307133722|ref|NP_001182517.1| splicing factor, arginine/serine-rich 7 [Equus caballus]
gi|73980752|ref|XP_532939.2| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Canis lupus familiaris]
gi|301777346|ref|XP_002924090.1| PREDICTED: splicing factor, arginine/serine-rich 7-like
[Ailuropoda melanoleuca]
gi|311252785|ref|XP_003125258.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Sus scrofa]
gi|410955427|ref|XP_003984355.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Felis catus]
gi|426223793|ref|XP_004006058.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Ovis
aries]
gi|440907651|gb|ELR57771.1| Serine/arginine-rich splicing factor 7 [Bos grunniens mutus]
Length = 238
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|344237407|gb|EGV93510.1| Splicing factor, arginine/serine-rich 7 [Cricetulus griseus]
Length = 227
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 23 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 78
>gi|170596504|ref|XP_001902788.1| RNA-binding protein. [Brugia malayi]
gi|158589316|gb|EDP28363.1| RNA-binding protein., putative [Brugia malayi]
Length = 130
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 16 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
RPPG+AF+EFED RDAEDA++G DG G R RVE +H
Sbjct: 44 RPPGFAFIEFEDSRDAEDAVKGLDGTRICGVRPRVEFSH 82
>gi|395846036|ref|XP_003795721.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Otolemur garnettii]
gi|351715512|gb|EHB18431.1| Splicing factor, arginine/serine-rich 7 [Heterocephalus glaber]
Length = 238
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|344288799|ref|XP_003416134.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Loxodonta africana]
Length = 238
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|312089500|ref|XP_003146270.1| hypothetical protein LOAG_10698 [Loa loa]
Length = 111
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 16 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
RPPG+AF+EFED RDAEDA++G DG G R RVE +H
Sbjct: 44 RPPGFAFVEFEDSRDAEDAVKGLDGTRICGVRPRVEFSH 82
>gi|225713170|gb|ACO12431.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 129
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
YG + ++ LK GY F+EFED+RDA+DA++ DG + +G R+RVE A R +S
Sbjct: 29 YGKLREVALK-----NGYGFVEFEDHRDADDAVQDLDGKDMNGSRVRVEFARSPREKRNS 83
Query: 63 MDRYSSYSSGGSRGV---------SRRSDYRVLVTGLPSSASWQ 97
RY S S RR+ YR+ V L + SWQ
Sbjct: 84 --RYQSRRSPPRGRRGPPMKRNPPGRRTQYRIRVENLSTRTSWQ 125
>gi|410339107|gb|JAA38500.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|126304540|ref|XP_001362853.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Monodelphis domestica]
Length = 233
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|328793355|ref|XP_001123058.2| PREDICTED: RNA-binding protein 1-like [Apis mellifera]
Length = 150
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R+RVE+
Sbjct: 38 YGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEM 85
>gi|327262673|ref|XP_003216148.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Anolis carolinensis]
Length = 225
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|380012958|ref|XP_003690539.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 193
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R+RVE+
Sbjct: 65 YGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEM 112
>gi|198422995|ref|XP_002122454.1| PREDICTED: zinc finger (CCHC)-24 isoform 2 [Ciona intestinalis]
Length = 205
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 9 IDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
I++ + PPG+A++EFED RDA+DAI+G DG G R+RVE +HG
Sbjct: 32 INVWVAKSPPGFAYVEFEDPRDADDAIKGLDGKELHGRRIRVERSHG 78
>gi|431912751|gb|ELK14769.1| Splicing factor, arginine/serine-rich 7 [Pteropus alecto]
Length = 235
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|77735509|ref|NP_001029449.1| serine/arginine-rich splicing factor 7 [Bos taurus]
gi|122146164|sp|Q3T106.1|SRSF7_BOVIN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|74354545|gb|AAI02185.1| Splicing factor, arginine/serine-rich 7, 35kDa [Bos taurus]
gi|296482569|tpg|DAA24684.1| TPA: splicing factor, arginine/serine-rich 7 [Bos taurus]
Length = 235
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|194374435|dbj|BAG57113.1| unnamed protein product [Homo sapiens]
Length = 165
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|348574612|ref|XP_003473084.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Cavia porcellus]
Length = 235
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|392877166|gb|AFM87415.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
YGP+ + + PPG+AF+EFED RDA DA+R DG + G R+RVEL++G RR
Sbjct: 33 YGPLRSV--WVARNPPGFAFVEFEDPRDASDAVRELDGRSLCGCRVRVELSNGERR 86
>gi|194767988|ref|XP_001966096.1| GF19500 [Drosophila ananassae]
gi|190622981|gb|EDV38505.1| GF19500 [Drosophila ananassae]
Length = 179
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ ++ + PPG+AF+EFED RDAEDA RG DG G R+RVE+
Sbjct: 34 YGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGTRCCGTRIRVEM 81
>gi|402591119|gb|EJW85049.1| hypothetical protein WUBG_04043 [Wuchereria bancrofti]
Length = 129
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 16 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
RPPG+AF+EFED RDAEDA++ DG G R RVE++H
Sbjct: 44 RPPGFAFVEFEDARDAEDAVKALDGTRICGVRARVEISH 82
>gi|340711199|ref|XP_003394166.1| PREDICTED: RNA-binding protein 1-like [Bombus terrestris]
Length = 161
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ ++ + +PPG+AF+EFED RDAEDA+RG DG G R+RVE+
Sbjct: 34 YGPLRNV--WVARKPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEM 81
>gi|312089498|ref|XP_003146269.1| hypothetical protein LOAG_10696 [Loa loa]
Length = 113
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 13 IPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
+ RPPG+AF+EFED RDAEDA++ DG G R RVE++H
Sbjct: 41 VARRPPGFAFVEFEDARDAEDAVKALDGTRICGVRARVEISH 82
>gi|198422993|ref|XP_002121806.1| PREDICTED: zinc finger (CCHC)-24 isoform 1 [Ciona intestinalis]
Length = 230
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 9 IDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
I++ + PPG+A++EFED RDA+DAI+G DG G R+RVE +HG
Sbjct: 32 INVWVAKSPPGFAYVEFEDPRDADDAIKGLDGKELHGRRIRVERSHG 78
>gi|306482694|ref|NP_001182375.1| serine/arginine-rich splicing factor 7 isoform 2 [Homo sapiens]
gi|297265844|ref|XP_002799298.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 3
[Macaca mulatta]
gi|332227250|ref|XP_003262806.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Nomascus leucogenys]
gi|390474551|ref|XP_003734800.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Callithrix jacchus]
gi|402890620|ref|XP_003908581.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Papio anubis]
gi|403269674|ref|XP_003926841.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Saimiri boliviensis boliviensis]
gi|426335284|ref|XP_004029158.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Gorilla gorilla gorilla]
gi|119620770|gb|EAX00365.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_c
[Homo sapiens]
gi|383420739|gb|AFH33583.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|384948774|gb|AFI37992.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|387542062|gb|AFJ71658.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|410213318|gb|JAA03878.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251180|gb|JAA13557.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299020|gb|JAA28110.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|387916036|gb|AFK11627.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 168
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
YGP+ + + PPG+AF+EFED RDA DA+R DG + G R+RVEL++G RR
Sbjct: 37 YGPLRSV--WVARNPPGFAFVEFEDPRDASDAVRELDGRSLCGCRVRVELSNGERR 90
>gi|328777414|ref|XP_003249337.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 177
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R+RVE+
Sbjct: 65 YGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEM 112
>gi|297265840|ref|XP_002799297.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 2
[Macaca mulatta]
Length = 165
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|321469591|gb|EFX80571.1| hypothetical protein DAPPUDRAFT_304081 [Daphnia pulex]
Length = 162
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 10 DLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
++ + PPG+AF+EFED RDAEDA+R DG G R++VE++ G RR
Sbjct: 40 NVWVARNPPGFAFVEFEDPRDAEDAVRALDGVRLCGARVKVEMSTGKRR 88
>gi|170595883|ref|XP_001902557.1| Sr protein [Brugia malayi]
gi|158589706|gb|EDP28594.1| Sr protein, putative [Brugia malayi]
Length = 153
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 16 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
RPPG+AF+EFED RDAEDA++ DG G R RVE++H
Sbjct: 53 RPPGFAFVEFEDARDAEDAVKALDGTRICGVRARVEISH 91
>gi|306774103|ref|NP_001182416.1| serine/arginine-rich splicing factor 7 isoform 4 [Mus musculus]
Length = 223
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|306774101|ref|NP_001182415.1| serine/arginine-rich splicing factor 7 isoform 3 [Mus musculus]
Length = 227
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|306774098|ref|NP_001182414.1| serine/arginine-rich splicing factor 7 isoform 2 [Mus musculus]
gi|26350021|dbj|BAC38650.1| unnamed protein product [Mus musculus]
Length = 235
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|392879762|gb|AFM88713.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
YGP+ + + PPG+AF+EFED RDA DA+R DG + G R+RVEL++G RR
Sbjct: 33 YGPLRSV--WVARNPPGFAFVEFEDPRDASDAVRELDGRSLCGCRVRVELSNGERR 86
>gi|395846038|ref|XP_003795722.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Otolemur garnettii]
Length = 226
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|344288801|ref|XP_003416135.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Loxodonta africana]
Length = 226
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|148706566|gb|EDL38513.1| mCG17902, isoform CRA_l [Mus musculus]
Length = 243
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 42 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 97
>gi|443725387|gb|ELU13010.1| hypothetical protein CAPTEDRAFT_155910 [Capitella teleta]
Length = 268
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
YGP+ + + PPG+AF+EFED RDA+D++RG DG + G R+RVEL+ G R
Sbjct: 53 YGPLKSV--WVARNPPGFAFVEFEDPRDADDSVRGLDGSSLCGTRVRVELSTGKVR 106
>gi|240848709|ref|NP_001155652.1| RNA-binding protein-like [Acyrthosiphon pisum]
gi|239788597|dbj|BAH70971.1| ACYPI006120 [Acyrthosiphon pisum]
Length = 135
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGR 57
YGP+ +I I PPG+AF+E+ED RDAEDA+RG DG G R+ V+++ G R
Sbjct: 34 YGPLKNI--WIARNPPGFAFIEYEDPRDAEDAVRGLDGTRCCGSRIIVQMSTGKR 86
>gi|22122585|ref|NP_666195.1| serine/arginine-rich splicing factor 7 isoform 1 [Mus musculus]
gi|306922410|ref|NP_001034124.2| splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|19343869|gb|AAH25529.1| Splicing factor, arginine/serine-rich 7 [Mus musculus]
gi|74202235|dbj|BAE23499.1| unnamed protein product [Mus musculus]
gi|74212267|dbj|BAE40291.1| unnamed protein product [Mus musculus]
gi|148706555|gb|EDL38502.1| mCG17902, isoform CRA_a [Mus musculus]
gi|149050602|gb|EDM02775.1| rCG61762, isoform CRA_d [Rattus norvegicus]
Length = 238
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|328777412|ref|XP_397274.4| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 193
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R+RVE+
Sbjct: 65 YGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEM 112
>gi|380023824|ref|XP_003695711.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 166
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ ++ + PPG+AF+EFED RDAEDA+RG DG G R+RVE+
Sbjct: 38 YGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEM 85
>gi|253723275|pdb|2I38|A Chain A, Solution Structure Of The Rrm Of Srp20
Length = 150
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
YGP+ + + PPG+AF+EFED RDA DA+R DG G R+RVEL++G +R
Sbjct: 97 YGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRDLDGRTLCGCRVRVELSNGEKR 150
>gi|148706559|gb|EDL38506.1| mCG17902, isoform CRA_e [Mus musculus]
gi|149050605|gb|EDM02778.1| rCG61762, isoform CRA_g [Rattus norvegicus]
Length = 215
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|148706562|gb|EDL38509.1| mCG17902, isoform CRA_h [Mus musculus]
gi|149050603|gb|EDM02776.1| rCG61762, isoform CRA_e [Rattus norvegicus]
Length = 226
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|119620768|gb|EAX00363.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_a
[Homo sapiens]
gi|148706558|gb|EDL38505.1| mCG17902, isoform CRA_d [Mus musculus]
gi|149050600|gb|EDM02773.1| rCG61762, isoform CRA_b [Rattus norvegicus]
Length = 137
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|355718930|gb|AES06434.1| splicing factor, arginine/serine-rich 7, 35kDa [Mustela putorius
furo]
Length = 199
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 43 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 98
>gi|324532579|gb|ADY49247.1| Splicing factor, arginine/serine-rich 6, partial [Ascaris suum]
Length = 156
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 16 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
RPPG+AF+EFED RDAED+++ DG G R RVEL+H
Sbjct: 44 RPPGFAFVEFEDSRDAEDSVKALDGTRICGVRARVELSH 82
>gi|311252787|ref|XP_003125259.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Sus scrofa]
gi|345782230|ref|XP_003432237.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Canis lupus familiaris]
gi|410955429|ref|XP_003984356.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Felis catus]
gi|426223795|ref|XP_004006059.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Ovis
aries]
Length = 226
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|71034173|ref|XP_766728.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353685|gb|EAN34445.1| hypothetical protein TP01_1207 [Theileria parva]
Length = 543
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 20/158 (12%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSSS 62
+GPI ID + +AF+++ +DAE AIR G L+V+ + SS
Sbjct: 383 FGPINRIDFR-----RKFAFIDYVRSKDAESAIREMHNKFIWGSYLKVQPHIDQNKKLSS 437
Query: 63 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 122
D S+ ++ V+ L S SWQDLKD R+AGDV ++ +
Sbjct: 438 RDPKPSF--------------QITVSNLDQSVSWQDLKDFGRQAGDVHYTSIIIKGDRRF 483
Query: 123 GIVDYTSYDDMKYAIRKLD-RSEFRNAFSRSYVRVREY 159
G+++YT+ + ++ A+++L+ + N +++ + E+
Sbjct: 484 GLIEYTNEESVQNAMKELNGKKIVDNTLELTHIPMSEF 521
>gi|346473189|gb|AEO36439.1| hypothetical protein [Amblyomma maculatum]
Length = 141
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
+GP+ ++ + PPG+AF+EFED RDAEDA R DG G R+RVE++H
Sbjct: 30 FGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGSRLCGTRVRVEMSH 79
>gi|149050604|gb|EDM02777.1| rCG61762, isoform CRA_f [Rattus norvegicus]
Length = 207
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|393904920|gb|EFO17802.2| hypothetical protein LOAG_10698 [Loa loa]
Length = 133
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 16 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
RPPG+AF+EFED RDAEDA++G DG G R RVE +H
Sbjct: 44 RPPGFAFVEFEDSRDAEDAVKGLDGTRICGVRPRVEFSH 82
>gi|222137600|gb|ACM45327.1| rbp1-like RNA-binding protein PD [Bombyx mori]
Length = 117
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YG I ++ + PPG+AF+EFED RDAED++RG DG G R+RVE+++G
Sbjct: 34 YGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 84
>gi|222137598|gb|ACM45326.1| rbp1-like RNA-binding protein PC [Bombyx mori]
Length = 91
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YG I ++ + PPG+AF+EFED RDAED++RG DG G R+RVE+++G
Sbjct: 34 YGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 84
>gi|348574616|ref|XP_003473086.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Cavia porcellus]
Length = 223
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|221221656|gb|ACM09489.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 272
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + + PPG+AF+E+ED RDAEDA +G DG G R+RVEL+ G R S
Sbjct: 38 YGPLRSV--WVARNPPGFAFVEYEDPRDAEDATKGMDGKVLCGARIRVELSTGMSRKS 93
>gi|313233455|emb|CBY24570.1| unnamed protein product [Oikopleura dioica]
Length = 583
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 31/137 (22%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH-------- 54
YG + DI LK GY F++F+D DA+DA++ DG G ++R+EL++
Sbjct: 435 YGSLRDISLK-----GGYGFVQFKDKYDAKDAVQDLDGKEICGQKVRIELSNGGRDRTRR 489
Query: 55 ----------------GGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASW 96
R +S R S Y R G +++ Y + + L SW
Sbjct: 490 GRDSYSRSRSRSRDNSRYSRSTSKSPRRSFYERTAYRKYGAPKKTKYAIEIENLSERVSW 549
Query: 97 QDLKDHMRRAGDVCFSQ 113
QDLKD RR G+V + +
Sbjct: 550 QDLKDFFRRVGEVSYGE 566
>gi|93003218|tpd|FAA00192.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 238
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 9 IDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
I++ + PPG+A++EFED RDA+DAI+G DG G R+RVE +HG
Sbjct: 40 INVWVAKSPPGFAYVEFEDPRDADDAIKGLDGKELHGRRIRVERSHG 86
>gi|56755711|gb|AAW26034.1| SJCHGC01826 protein [Schistosoma japonicum]
Length = 220
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 9 IDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
+D+ + PPG+AF E+ DAE A+R DG N G R+RVE AHGGR S+
Sbjct: 37 VDVWVARNPPGFAFAEYVKSSDAEKAVRSLDGVNVCGSRIRVEFAHGGRSKSA 89
>gi|350405857|ref|XP_003487573.1| PREDICTED: RNA-binding protein 1-like [Bombus impatiens]
Length = 162
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ ++ + +PPG+AF+EFED RDAEDA+RG DG G R+RVE+
Sbjct: 34 YGPLRNV--WVARKPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEM 81
>gi|348523061|ref|XP_003449042.1| PREDICTED: hypothetical protein LOC100708809 [Oreochromis
niloticus]
Length = 240
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YGP+ + + PPG+AF+EFED RDAEDA++G DG G R+RVE++ G
Sbjct: 39 YGPLRSV--WVARNPPGFAFVEFEDPRDAEDAVKGMDGKVLCGSRVRVEMSTG 89
>gi|253722541|pdb|2I2Y|A Chain A, Solution Structure Of The Rrm Of Srp20 Bound To The Rna
Cauc
Length = 150
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
YGP+ + + PPG+AF+EFED RDA DA+R DG G R+RVEL++G +R
Sbjct: 97 YGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR 150
>gi|281350478|gb|EFB26062.1| hypothetical protein PANDA_013342 [Ailuropoda melanoleuca]
Length = 120
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 25 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 80
>gi|324506217|gb|ADY42661.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 163
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 16 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
RPPG+AF+EFED RDAED+++ DG G R RVEL+H
Sbjct: 44 RPPGFAFVEFEDSRDAEDSVKALDGTRICGVRARVELSH 82
>gi|324512982|gb|ADY45358.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 142
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 16 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
RPPG+AF+EFED RDAED+++ DG G R RVEL+H
Sbjct: 44 RPPGFAFVEFEDSRDAEDSVKALDGTRICGVRARVELSH 82
>gi|148706563|gb|EDL38510.1| mCG17902, isoform CRA_i [Mus musculus]
Length = 205
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|209734182|gb|ACI67960.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|221222340|gb|ACM09831.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|303663267|gb|ADM16100.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 172
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHSS 61
YGP+ + + PPG+AF+EFED RDA DA+R DG G R+RVEL++G +R S
Sbjct: 37 YGPLRSV--WVARNPPGFAFVEFEDPRDATDAVRELDGRTLSGCRVRVELSNGEKRTRS 93
>gi|402591118|gb|EJW85048.1| hypothetical protein WUBG_04041 [Wuchereria bancrofti]
Length = 141
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 16 RPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH 54
RPPG+AF+EFED RDAEDA++G DG G R RVE +H
Sbjct: 44 RPPGFAFIEFEDSRDAEDAVKGLDGTRICGVRPRVEFSH 82
>gi|417407851|gb|JAA50519.1| Putative splicing factor arginine/serine-rich 7 35kda isoform cra
b, partial [Desmodus rotundus]
Length = 123
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 25 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 80
>gi|391333364|ref|XP_003741086.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Metaseiulus occidentalis]
Length = 162
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 10 DLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
++ + PPG+AF+EFED RDAEDA+R DG G R++ E++HG
Sbjct: 38 NVWVARNPPGFAFVEFEDSRDAEDAVRAVDGSRICGSRVKCEMSHG 83
>gi|150387449|gb|ABR68245.1| arginine/serine-rich 7 splicing factor [Cervus elaphus]
Length = 206
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 29 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 84
>gi|432889402|ref|XP_004075259.1| PREDICTED: uncharacterized protein LOC101155211 [Oryzias latipes]
Length = 251
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YGP+ + + PPG+AF+EFED RDAEDA++G DG G R+RVE++ G
Sbjct: 39 YGPLRSV--WVARNPPGFAFVEFEDPRDAEDAVKGMDGKLLCGSRVRVEMSTG 89
>gi|449274550|gb|EMC83651.1| Splicing factor, arginine/serine-rich 7, partial [Columba livia]
Length = 226
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVE++ G R S
Sbjct: 25 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVEVSTGMPRRS 80
>gi|313222821|emb|CBY41772.1| unnamed protein product [Oikopleura dioica]
Length = 730
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 31/139 (22%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAH-------- 54
YG + DI LK GY F++F+D DA+DA++ DG G ++R+EL++
Sbjct: 191 YGSLRDISLK-----GGYGFVQFKDKYDAKDAVQDLDGKEICGQKVRIELSNGGRDRTRR 245
Query: 55 ----------------GGRRHSSSMDRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASW 96
R +S R S Y R G +++ Y + + L SW
Sbjct: 246 GRDSYSRSRSRSRDNSRYSRSTSKSPRRSFYERTAYRKYGAPKKTKYAIEIENLSERVSW 305
Query: 97 QDLKDHMRRAGDVCFSQVF 115
QDLKD RR G+V + F
Sbjct: 306 QDLKDFFRRVGEVSYDNHF 324
>gi|195438960|ref|XP_002067399.1| GK16401 [Drosophila willistoni]
gi|194163484|gb|EDW78385.1| GK16401 [Drosophila willistoni]
Length = 176
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVEL 52
YGP+ ++ + PPG+AF+EFED RDAEDA RG DG G R+RVE+
Sbjct: 34 YGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGTRCCGTRIRVEM 81
>gi|119620769|gb|EAX00364.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_b
[Homo sapiens]
Length = 132
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|389609451|dbj|BAM18337.1| RNA-binding protein 1 [Papilio xuthus]
Length = 141
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YG I ++ + PPG+AF+EFED RDAED++RG DG G R+RVE+++G
Sbjct: 34 YGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 84
>gi|115361548|gb|ABI95863.1| RNA-binding protein [Bombyx mori]
Length = 142
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG 55
YG I ++ + PPG+AF+EFED RDAED++RG DG G R+RVE+++G
Sbjct: 34 YGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 84
>gi|326915074|ref|XP_003203846.1| PREDICTED: hypothetical protein LOC100542161 [Meleagris gallopavo]
Length = 273
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVE++ G R S
Sbjct: 67 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVEVSTGMPRRS 122
>gi|148706556|gb|EDL38503.1| mCG17902, isoform CRA_b [Mus musculus]
gi|149050601|gb|EDM02774.1| rCG61762, isoform CRA_c [Rattus norvegicus]
Length = 209
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRS 89
>gi|126309365|ref|XP_001367778.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Monodelphis domestica]
Length = 235
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA++G DG G R+RVEL+ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVQGLDGKVICGSRVRVELSTGLPRRS 89
>gi|291396115|ref|XP_002714714.1| PREDICTED: splicing factor, arginine/serine-rich 3 [Oryctolagus
cuniculus]
gi|297290700|ref|XP_001112817.2| PREDICTED: splicing factor, arginine/serine-rich 3-like [Macaca
mulatta]
gi|2125864|emb|CAA62845.1| Srp20 [Mus musculus]
gi|74139694|dbj|BAE31698.1| unnamed protein product [Mus musculus]
gi|74214717|dbj|BAE31197.1| unnamed protein product [Mus musculus]
gi|74220550|dbj|BAE31490.1| unnamed protein product [Mus musculus]
gi|119624303|gb|EAX03898.1| splicing factor, arginine/serine-rich 3, isoform CRA_a [Homo
sapiens]
gi|148690656|gb|EDL22603.1| mCG21131, isoform CRA_a [Mus musculus]
gi|149043498|gb|EDL96949.1| rCG61099, isoform CRA_b [Rattus norvegicus]
gi|194385252|dbj|BAG65003.1| unnamed protein product [Homo sapiens]
Length = 124
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
YGP+ + + PPG+AF+EFED RDA DA+R DG G R+RVEL++G +R
Sbjct: 33 YGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR 86
>gi|112983196|ref|NP_001037604.1| RNA-binding protein 1 [Bombyx mori]
gi|95115204|gb|ABF55968.1| Rbp1 [Bombyx mori]
Length = 156
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Query: 10 DLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHG----GRRHSSSMDR 65
++ + PPG+AF+EFED RDAED++RG DG G R+RVE+++G RR+ ++D
Sbjct: 39 NVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDRRYFLNVDS 98
Query: 66 Y 66
Y
Sbjct: 99 Y 99
>gi|403182431|gb|EJY57381.1| AAEL017082-PA [Aedes aegypti]
Length = 243
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELA 53
YGP+ ++ + PPG+AF+EF+D RDAED++RG DG G R+RVEL+
Sbjct: 35 YGPLRNV--WVARNPPGFAFVEFDDARDAEDSVRGLDGRTVCGRRVRVELS 83
>gi|432856730|ref|XP_004068509.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 1
[Oryzias latipes]
Length = 166
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
YGP+ + + PPG+AF+EFED RDA DA+R DG G R+RVEL++G +R
Sbjct: 32 YGPLRSV--WVARNPPGFAFVEFEDPRDATDAVRELDGRTLCGCRVRVELSNGEKR 85
>gi|417396073|gb|JAA45070.1| Putative splicing factor arginine/serine-rich 3 isoform cra c
[Desmodus rotundus]
Length = 135
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
YGP+ + + PPG+AF+EFED RDA DA+R DG G R+RVEL++G +R
Sbjct: 33 YGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR 86
>gi|363731484|ref|XP_003640982.1| PREDICTED: uncharacterized protein LOC100859609 [Gallus gallus]
Length = 250
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + I PPG+AF+EFED RDAEDA+RG DG G R+RVE++ G R S
Sbjct: 34 YGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVEVSTGMPRRS 89
>gi|417407793|gb|JAA50492.1| Putative splicing factor arginine/serine-rich 3, partial
[Desmodus rotundus]
Length = 116
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
YGP+ + + PPG+AF+EFED RDA DA+R DG G R+RVEL++G +R
Sbjct: 25 YGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR 78
>gi|221220242|gb|ACM08782.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 260
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRHS 60
YGP+ + + PPG+AF+E+ED RDAEDA +G DG G R+RVEL+ G R S
Sbjct: 38 YGPLRSV--WVARNPPGFAFVEYEDPRDAEDATKGMDGKVLCGARIRVELSTGMSRKS 93
>gi|432857012|ref|XP_004068510.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Oryzias latipes]
Length = 182
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
YGP+ + + PPG+AF+EFED RDA DA+R DG G R+RVEL++G +R
Sbjct: 32 YGPLRSV--WVARNPPGFAFVEFEDPRDATDAVRELDGRTLCGCRVRVELSNGEKR 85
>gi|149640565|ref|XP_001509029.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Ornithorhynchus anatinus]
Length = 164
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRRH 59
YGP+ + + PPG+AF+EFED RDA DA+R DG G R+RVEL++G +R+
Sbjct: 33 YGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKRN 87
>gi|355748508|gb|EHH52991.1| hypothetical protein EGM_13542 [Macaca fascicularis]
Length = 164
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 3 YGPIVDIDLKIPPRPPGYAFLEFEDYRDAEDAIRGRDGYNFDGYRLRVELAHGGRR 58
YGP+ + + PPG+AF+EFED RDA DA+R DG G R+RVEL++G +R
Sbjct: 33 YGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR 86
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,319,282,771
Number of Sequences: 23463169
Number of extensions: 191255248
Number of successful extensions: 1038037
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5000
Number of HSP's successfully gapped in prelim test: 8365
Number of HSP's that attempted gapping in prelim test: 809037
Number of HSP's gapped (non-prelim): 104709
length of query: 250
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 111
effective length of database: 9,097,814,876
effective search space: 1009857451236
effective search space used: 1009857451236
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)