Query 025584
Match_columns 250
No_of_seqs 250 out of 1995
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 13:18:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025584.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025584hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dsc_A ADP-sugar pyrophosphata 99.9 2.4E-20 8.1E-25 160.2 17.6 114 118-243 28-149 (212)
2 1g0s_A Hypothetical 23.7 kDa p 99.9 8.3E-21 2.8E-25 163.4 14.7 112 119-244 27-148 (209)
3 3o6z_A GDP-mannose pyrophospha 99.8 8E-20 2.8E-24 154.8 15.0 121 107-244 6-136 (191)
4 1vhz_A ADP compounds hydrolase 99.8 1.7E-19 5.7E-24 154.0 16.3 113 118-246 21-135 (198)
5 3q91_A Uridine diphosphate glu 99.8 2.9E-20 1E-24 162.4 9.3 108 125-244 17-156 (218)
6 1mk1_A ADPR pyrophosphatase; n 99.8 6E-19 2.1E-23 150.9 15.5 114 118-246 17-131 (207)
7 2yvp_A NDX2, MUTT/nudix family 99.8 9.4E-18 3.2E-22 139.4 12.8 112 118-245 15-127 (182)
8 2w4e_A MUTT/nudix family prote 99.7 1.7E-17 5.8E-22 133.5 9.9 88 142-244 3-90 (145)
9 1v8y_A ADP-ribose pyrophosphat 99.7 4.9E-16 1.7E-20 127.8 12.3 102 118-245 17-118 (170)
10 3shd_A Phosphatase NUDJ; nudix 99.5 2.2E-13 7.4E-18 109.1 11.3 85 145-244 4-88 (153)
11 2b0v_A Nudix hydrolase; struct 99.4 5.5E-13 1.9E-17 106.3 10.1 60 145-208 7-66 (153)
12 3cng_A Nudix hydrolase; struct 99.4 1.2E-12 4E-17 109.9 11.6 72 156-244 50-121 (189)
13 4dyw_A MUTT/nudix family prote 99.4 1.5E-12 5.1E-17 105.8 10.9 50 160-211 41-90 (157)
14 3son_A Hypothetical nudix hydr 99.4 2.3E-12 7.9E-17 102.8 10.8 61 143-208 4-64 (149)
15 3r03_A Nudix hydrolase; struct 99.4 1.9E-12 6.5E-17 102.2 10.2 60 152-214 15-74 (144)
16 1sjy_A MUTT/nudix family prote 99.4 2.3E-12 7.9E-17 103.3 10.7 84 146-243 15-101 (159)
17 3h95_A Nucleoside diphosphate- 99.4 1.3E-12 4.5E-17 110.5 8.6 89 140-242 22-110 (199)
18 3gwy_A Putative CTP pyrophosph 99.4 3.5E-12 1.2E-16 100.9 10.5 74 156-243 16-91 (140)
19 3gg6_A Nudix motif 18, nucleos 99.4 2.2E-12 7.5E-17 103.7 9.3 53 152-208 27-79 (156)
20 3grn_A MUTT related protein; s 99.4 5.1E-12 1.8E-16 101.4 11.0 56 153-211 16-72 (153)
21 1nqz_A COA pyrophosphatase (MU 99.4 1.6E-12 5.6E-17 108.8 8.4 85 146-243 36-121 (194)
22 2yyh_A MUTT domain, 8-OXO-DGTP 99.3 6E-12 2E-16 99.3 10.5 43 161-207 27-69 (139)
23 1u20_A U8 snoRNA-binding prote 99.3 4.7E-13 1.6E-17 115.2 4.3 107 118-243 18-128 (212)
24 1rya_A GDP-mannose mannosyl hy 99.3 7.8E-12 2.7E-16 100.3 11.2 64 146-214 20-83 (160)
25 3hhj_A Mutator MUTT protein; n 99.3 3.8E-12 1.3E-16 102.7 9.3 61 151-214 35-95 (158)
26 3q93_A 7,8-dihydro-8-oxoguanin 99.3 6E-12 2.1E-16 104.6 10.7 63 146-214 25-87 (176)
27 1ktg_A Diadenosine tetraphosph 99.3 7.3E-12 2.5E-16 98.1 10.4 58 146-207 5-62 (138)
28 2a6t_A SPAC19A8.12; alpha/beta 99.3 1.3E-12 4.5E-17 117.1 6.8 82 145-244 102-183 (271)
29 2pbt_A AP4A hydrolase; nudix p 99.3 4.3E-12 1.5E-16 98.7 8.8 81 146-244 6-87 (134)
30 1q27_A Putative nudix hydrolas 99.3 1.2E-11 4E-16 101.1 10.9 86 146-244 36-123 (171)
31 1f3y_A Diadenosine 5',5'''-P1, 99.3 6.4E-12 2.2E-16 100.9 9.1 56 145-207 15-70 (165)
32 3id9_A MUTT/nudix family prote 99.3 1.1E-11 3.9E-16 101.1 10.4 44 160-207 35-78 (171)
33 3ees_A Probable pyrophosphohyd 99.3 8.9E-12 3E-16 98.8 9.4 55 153-210 29-83 (153)
34 3i7u_A AP4A hydrolase; nudix p 99.3 9.3E-12 3.2E-16 99.4 9.5 53 146-208 6-58 (134)
35 3oga_A Nucleoside triphosphata 99.3 1.6E-11 5.6E-16 99.6 10.0 57 153-212 35-92 (165)
36 1vcd_A NDX1; nudix protein, di 99.3 1.8E-11 6.3E-16 94.4 9.6 78 146-243 4-81 (126)
37 3i9x_A MUTT/nudix family prote 99.3 1.9E-11 6.7E-16 102.0 10.4 48 159-207 46-99 (187)
38 3eds_A MUTT/nudix family prote 99.3 8.9E-12 3.1E-16 100.5 8.0 54 146-208 23-76 (153)
39 2fkb_A Putative nudix hydrolas 99.3 2.4E-11 8.1E-16 100.0 10.6 81 146-243 39-123 (180)
40 3exq_A Nudix family hydrolase; 99.3 1.7E-11 5.9E-16 99.8 9.7 49 160-210 24-72 (161)
41 2fvv_A Diphosphoinositol polyp 99.3 1.5E-11 5.2E-16 104.5 9.2 44 160-207 55-98 (194)
42 2o1c_A DATP pyrophosphohydrola 99.3 1.3E-11 4.6E-16 97.3 8.2 57 146-209 11-68 (150)
43 3u53_A BIS(5'-nucleosyl)-tetra 99.3 4.1E-11 1.4E-15 96.8 11.1 47 158-208 23-69 (155)
44 3f6a_A Hydrolase, nudix family 99.2 2.6E-11 8.9E-16 98.0 9.7 54 146-208 8-61 (159)
45 2rrk_A ORF135, CTP pyrophospho 99.2 1.9E-11 6.3E-16 95.8 8.6 51 154-207 17-67 (140)
46 2azw_A MUTT/nudix family prote 99.2 2.5E-11 8.5E-16 95.9 8.6 84 145-244 19-105 (148)
47 1mut_A MUTT, nucleoside tripho 99.2 4.1E-12 1.4E-16 98.1 3.5 52 153-207 12-63 (129)
48 2kdv_A RNA pyrophosphohydrolas 99.2 6.8E-11 2.3E-15 97.2 10.1 54 146-207 10-63 (164)
49 2jvb_A Protein PSU1, mRNA-deca 99.2 1.5E-11 5.1E-16 97.6 5.8 55 146-207 6-60 (146)
50 2pqv_A MUTT/nudix family prote 99.2 5.1E-11 1.8E-15 95.5 9.0 45 160-211 31-75 (154)
51 1hzt_A Isopentenyl diphosphate 99.2 5.5E-11 1.9E-15 99.3 9.5 58 146-207 34-93 (190)
52 2b06_A MUTT/nudix family prote 99.2 8.4E-11 2.9E-15 94.1 10.2 34 176-210 38-71 (155)
53 3f13_A Putative nudix hydrolas 99.2 4.7E-11 1.6E-15 98.7 8.6 68 153-243 23-90 (163)
54 3fk9_A Mutator MUTT protein; s 99.2 7.3E-11 2.5E-15 99.3 8.8 47 160-211 16-62 (188)
55 3q1p_A Phosphohydrolase (MUTT/ 99.2 7.9E-11 2.7E-15 100.4 8.7 46 160-210 80-125 (205)
56 2fml_A MUTT/nudix family prote 99.2 2.3E-10 7.7E-15 102.2 11.8 56 158-215 55-110 (273)
57 1vk6_A NADH pyrophosphatase; 1 99.1 1.3E-10 4.6E-15 104.2 9.1 74 152-243 146-219 (269)
58 2qjt_B Nicotinamide-nucleotide 99.1 1.5E-10 5.2E-15 105.0 9.6 47 160-208 220-266 (352)
59 2fb1_A Conserved hypothetical 99.1 2.1E-10 7.2E-15 99.7 10.0 52 159-214 28-79 (226)
60 2xsq_A U8 snoRNA-decapping enz 99.1 6.9E-11 2.4E-15 102.7 6.9 40 174-214 75-115 (217)
61 3o8s_A Nudix hydrolase, ADP-ri 99.1 1.2E-10 4E-15 99.4 8.1 45 160-210 82-126 (206)
62 2qjo_A Bifunctional NMN adenyl 99.1 1.8E-10 6.1E-15 103.8 9.2 50 155-208 212-261 (341)
63 3fcm_A Hydrolase, nudix family 99.1 2.3E-10 8E-15 96.3 7.6 52 147-205 48-99 (197)
64 3gz5_A MUTT/nudix family prote 99.1 5.4E-10 1.9E-14 98.0 9.8 55 157-215 35-91 (240)
65 1k2e_A Nudix homolog; nudix/MU 99.0 1.4E-10 4.9E-15 93.7 5.2 46 156-208 11-56 (156)
66 1x51_A A/G-specific adenine DN 99.0 7.6E-10 2.6E-14 89.0 7.7 47 160-207 35-83 (155)
67 3fjy_A Probable MUTT1 protein; 99.0 1.1E-09 3.8E-14 100.9 9.3 48 158-210 37-84 (364)
68 3e57_A Uncharacterized protein 98.8 2.8E-09 9.7E-14 92.8 5.3 51 154-207 76-136 (211)
69 2dho_A Isopentenyl-diphosphate 98.7 5.1E-08 1.8E-12 85.5 10.4 88 146-244 61-165 (235)
70 2pny_A Isopentenyl-diphosphate 98.7 4.3E-08 1.5E-12 86.6 8.2 88 146-244 72-176 (246)
71 3qsj_A Nudix hydrolase; struct 98.6 1.8E-08 6E-13 88.7 3.9 62 146-207 10-92 (232)
72 3dup_A MUTT/nudix family prote 98.6 1.3E-07 4.3E-12 86.4 9.7 91 146-243 120-214 (300)
73 3fsp_A A/G-specific adenine gl 98.6 5.7E-08 1.9E-12 90.2 7.5 54 151-208 246-299 (369)
74 1q33_A Pyrophosphatase, ADP-ri 98.6 5.3E-08 1.8E-12 87.9 7.1 43 159-206 139-181 (292)
75 3bho_A Cleavage and polyadenyl 98.6 3.4E-07 1.2E-11 79.6 10.4 84 152-243 66-159 (208)
76 3kvh_A Protein syndesmos; NUDT 98.4 2E-07 7E-12 80.7 5.6 44 160-207 44-88 (214)
77 3rh7_A Hypothetical oxidoreduc 98.1 9.2E-06 3.1E-10 74.6 8.7 52 147-210 184-236 (321)
78 1t6a_A Rbstp2229 gene product; 23.3 49 0.0017 26.1 2.6 38 59-98 81-118 (126)
No 1
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.85 E-value=2.4e-20 Score=160.24 Aligned_cols=114 Identities=25% Similarity=0.253 Sum_probs=95.6
Q ss_pred ccEEEEEEEEEEcCCCceeeeEEEEc-------CCEEEEEEEEcCC-CceEEEEEEeeecCCCCcEEEecceecCCCCCC
Q 025584 118 IGFLKFKADIFCKETGQKVPGIVFAR-------GPAVAVLILLDSE-GETYAILTEQVRVPTGRVILELPAGMLDDDKGD 189 (250)
Q Consensus 118 ~gf~kl~~d~~~~~~G~~~p~~v~~r-------g~aV~VL~il~~~-~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt 189 (250)
++|++++.+.+..++|+...+.++.+ +++|+|++++..+ ++.++||++|+|.+.+.+.|++|||++|+| |+
T Consensus 28 ~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~av~v~~v~~~~~~~~~vlLv~q~R~~~~~~~welPgG~ve~g-Es 106 (212)
T 2dsc_A 28 GKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDG-ET 106 (212)
T ss_dssp CSSEEEEEEEEECTTSCEEEEEEEEETTCCTTSCSEEEEEEEEECTTSCCEEEEEEEEEGGGTEEEEECCEEECCTT-CC
T ss_pred CCEEEEEEEEEECCCCCEEEEEEEEeeccCCCCCCEEEEEEEEeCCCCCcEEEEEEeecCCCCCcEEECCccccCCC-CC
Confidence 78999999999999999877776665 6899998876443 234699999999998778999999999997 69
Q ss_pred HHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCccccceEEEEEEE
Q 025584 190 FVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAVCSFFLHSFFLFL 243 (250)
Q Consensus 190 ~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~~~~~~pspG~~dE~i~lFl~~ 243 (250)
+++||+|||+||||+.+. .+..+ ..++.+||++++.+++|++.
T Consensus 107 ~~~aA~REl~EEtGl~~~--~~~~l---------~~~~~~~~~~~~~~~~~~a~ 149 (212)
T 2dsc_A 107 PEAAALRELEEETGYKGD--IAECS---------PAVCMDPGLSNCTIHIVTVT 149 (212)
T ss_dssp HHHHHHHHHHHHHCCCCE--EEEEC---------CCEESCTTTBCCEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCcc--ceEEe---------ccEEcCCCccCceEEEEEEE
Confidence 999999999999999874 33334 35789999999999999886
No 2
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.85 E-value=8.3e-21 Score=163.35 Aligned_cols=112 Identities=26% Similarity=0.320 Sum_probs=93.6
Q ss_pred cEEEEEEEEEE--cCCC---ceeeeEEEEcCCEEEEEEEEcCCCceEEEEEEeeecCCC-----CcEEEecceecCCCCC
Q 025584 119 GFLKFKADIFC--KETG---QKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTG-----RVILELPAGMLDDDKG 188 (250)
Q Consensus 119 gf~kl~~d~~~--~~~G---~~~p~~v~~rg~aV~VL~il~~~~~~~VlLvrQ~R~p~~-----~~~~ElPAG~vD~geE 188 (250)
||++++.+.+. .++| +...+.++.++++|+|+++...++ ++||++|+|.+.+ .+.||+|||++|+| |
T Consensus 27 g~~~v~~~~~~~~~~~g~~~~~~~r~~~~~~~av~vl~~~~~~~--~vLLvrq~R~~~~~~~~~~~~welPgG~ve~g-E 103 (209)
T 1g0s_A 27 GFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAAVLLPFDPVRD--EVVLIEQIRIAAYDTSETPWLLEMVAGMIEEG-E 103 (209)
T ss_dssp SSSEEEEEEEEEBCTTSCBCCCEEEEEEECCCEEEEEEEETTTT--EEEEEEEECGGGGGGSSCSEEEECEEEECCTT-C
T ss_pred eeEEEEEEEEEEEcCCCCcceEEEEEEEeCCCEEEEEEEECCCC--EEEEEEeecccCCCCCCCCeEEEeCcccCCCC-c
Confidence 48888888765 5777 467788999999999987532344 4999999999875 57999999999997 6
Q ss_pred CHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCccccceEEEEEEEc
Q 025584 189 DFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAVCSFFLHSFFLFLS 244 (250)
Q Consensus 189 t~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~~~~~~pspG~~dE~i~lFl~~~ 244 (250)
++++||+||++||||+.+. .+..+ ..+|++||++++.+++|++..
T Consensus 104 ~~~~aA~REl~EEtGl~~~--~~~~l---------~~~~~~~g~~~~~~~~f~a~~ 148 (209)
T 1g0s_A 104 SVEDVARREAIEEAGLIVK--RTKPV---------LSFLASPGGTSERSSIMVGEV 148 (209)
T ss_dssp CHHHHHHHHHHHHHCCCCC--CEEEE---------EEEESCTTTBCCEEEEEEEEC
T ss_pred CHHHHHHHHHHHHcCcccC--cEEEe---------EEEecCCCccCcEEEEEEEEE
Confidence 9999999999999999973 66666 468999999999999999973
No 3
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.83 E-value=8e-20 Score=154.78 Aligned_cols=121 Identities=21% Similarity=0.297 Sum_probs=97.0
Q ss_pred EEeeEeeecccccEEEEEEEEE--EcCCCce--eeeEEEEcCCEEEEEEEEcCCCceEEEEEEeeecCC------CCcEE
Q 025584 107 LIQGVDMFGKRIGFLKFKADIF--CKETGQK--VPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPT------GRVIL 176 (250)
Q Consensus 107 ~v~~vd~fg~~~gf~kl~~d~~--~~~~G~~--~p~~v~~rg~aV~VL~il~~~~~~~VlLvrQ~R~p~------~~~~~ 176 (250)
++.+..... .+|++++.+.+ ..+||.. ..+.++.++++|+|+++...++ +++|++|+|.|. +.+.|
T Consensus 6 ~i~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~r~~~~~~~av~v~~~~~~~~--~vlLv~~~r~~~~~~~~~~~~~w 81 (191)
T 3o6z_A 6 TLIKDKILS--DNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNTKKK--TVVLIRQFRVATWVNGNESGQLI 81 (191)
T ss_dssp EEEEEEEEE--CSSSEEEEEEEEEECTTSCEEEEEEEEEECCCEEEEEEEETTTT--EEEEEEEECHHHHTTTCTTCEEE
T ss_pred EEeEeEEEe--cCcEEEEEEEEEEECCCCCEEEEEEEEEecCCEEEEEEEECCCC--EEEEEEcCCccccccCCCCCeEE
Confidence 344444443 48999998876 4489975 4578889999999987633334 599999999876 77899
Q ss_pred EecceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCccccceEEEEEEEc
Q 025584 177 ELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAVCSFFLHSFFLFLS 244 (250)
Q Consensus 177 ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~~~~~~pspG~~dE~i~lFl~~~ 244 (250)
++|||++| | |++++||+||++||||+++ ..+..+ ..+|++||.+++.+++|++..
T Consensus 82 ~lPgG~ve-g-E~~~~aa~REl~EEtG~~~--~~~~~l---------~~~~~~~~~~~~~~~~f~~~~ 136 (191)
T 3o6z_A 82 ESCAGLLD-N-DEPEVCIRKEAIEETGYEV--GEVRKL---------FELYMSPGGVTELIHFFIAEY 136 (191)
T ss_dssp ECEEEECC-S-SCHHHHHHHHHHHHC-CCC--SCEEEE---------EEEESCTTTBCCEEEEEEEEC
T ss_pred EecceEeC-C-CCHHHHHHHHHHHHhCCcc--CcEEEE---------EEEEeCCCccCcEEEEEEEEE
Confidence 99999999 7 6999999999999999997 366666 468999999999999999974
No 4
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.83 E-value=1.7e-19 Score=154.02 Aligned_cols=113 Identities=17% Similarity=0.117 Sum_probs=95.0
Q ss_pred ccEEEEEEEEEEcCCCceeeeEEEE--cCCEEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHH
Q 025584 118 IGFLKFKADIFCKETGQKVPGIVFA--RGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAV 195 (250)
Q Consensus 118 ~gf~kl~~d~~~~~~G~~~p~~v~~--rg~aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~ 195 (250)
++|++++.+.+..++|+...+.++. ++++|+|+++ +.+ ++||++|+|.+.+...|++|||++|+| |++++||+
T Consensus 21 ~~~~~v~~~~~~~~~G~~~~~~~~~~~~~~av~vl~~-~~~---~vLLvrq~r~~~~~~~welPgG~ve~g-Es~~~aA~ 95 (198)
T 1vhz_A 21 SRLFTVESVDLEFSNGVRRVYERMRPTNREAVMIVPI-VDD---HLILIREYAVGTESYELGFSKGLIDPG-ESVYEAAN 95 (198)
T ss_dssp CSSCEEEEEEEECTTSCEEEEEEECCCCCCEEEEEEE-ETT---EEEEEEEEETTTTEEEEECEEEECCTT-CCHHHHHH
T ss_pred CCEEEEEEEEEEcCCCCEEEEEEEEeCCCCEEEEEEE-ECC---EEEEEEcccCCCCCcEEEeCcccCCCC-cCHHHHHH
Confidence 7899999999999999887766554 5778888864 443 499999999988888999999999997 69999999
Q ss_pred HHHHHHhCCcccccceeeccccccCCCCceeecCCccccceEEEEEEEcee
Q 025584 196 REVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAVCSFFLHSFFLFLSVE 246 (250)
Q Consensus 196 REL~EETGl~i~~~~L~~L~~l~~~~~~~~~~pspG~~dE~i~lFl~~~~e 246 (250)
||++||||+++. .+..+ ..++++||.+++.+++|++....
T Consensus 96 REl~EEtGl~~~--~~~~l---------~~~~~~~~~~~~~~~~f~a~~~~ 135 (198)
T 1vhz_A 96 RELKEEVGFGAN--DLTFL---------KKLSMAPSYFSSKMNIVVAQDLY 135 (198)
T ss_dssp HHHHHHHSEEEE--EEEEE---------EEEECCTTTCCCEEEEEEEEEEE
T ss_pred HHHHHHHCCCcC--ceEEE---------EEEeCCCCccCcEEEEEEEEeCC
Confidence 999999999974 55556 46788999999999999997543
No 5
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.81 E-value=2.9e-20 Score=162.38 Aligned_cols=108 Identities=21% Similarity=0.220 Sum_probs=74.4
Q ss_pred EEEEEcCCCceeeeEEEEcCCEEEEEEEEcCCCceEEEEEEeeecCCC-------------------------------C
Q 025584 125 ADIFCKETGQKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTG-------------------------------R 173 (250)
Q Consensus 125 ~d~~~~~~G~~~p~~v~~rg~aV~VL~il~~~~~~~VlLvrQ~R~p~~-------------------------------~ 173 (250)
...+..+||+...+.++.++++|+|+++...++ .+||++|+|++.. +
T Consensus 17 ~~~~~~~~G~~~~~e~v~~~~aV~vl~~~~~~~--~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (218)
T 3q91_A 17 NLYFQSMNGAQKSWDFMKTHDSVTVLLFNSSRR--SLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAG 94 (218)
T ss_dssp ------------------CCCEEEEEEEEGGGT--EEEEEEEECHHHHHHHTC-------------------------CC
T ss_pred EEEEECCCCCEEEEEEEEcCCeEEEEEEECCCC--EEEEEEccccccccccccccccccccccccccccccccccccCCC
Confidence 334456899999999999999999997532334 5999999998854 6
Q ss_pred cEEEecceecCC-CCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCccccceEEEEEEEc
Q 025584 174 VILELPAGMLDD-DKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAVCSFFLHSFFLFLS 244 (250)
Q Consensus 174 ~~~ElPAG~vD~-geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~~~~~~pspG~~dE~i~lFl~~~ 244 (250)
+.||+|||++|+ | |++++||+||++||||+.+....+..+ ..++++||.+++.+++|++..
T Consensus 95 ~~welPgG~ve~~g-Es~~eaA~REl~EEtGl~~~~~~l~~l---------~~~~~~~g~~~~~~~~f~a~~ 156 (218)
T 3q91_A 95 VTVELCAGLVDQPG-LSLEEVACKEAWEECGYHLAPSDLRRV---------ATYWSGVGLTGSRQTMFYTEV 156 (218)
T ss_dssp EEEECEEEECCSSS-CCHHHHHHHHHHHHHCBCCCGGGCEEE---------EEEEEC---CCEEEEEEEEEE
T ss_pred eEEECCcceeCCCC-CCHHHHHHHHHHHHhCCccccCceEEE---------EEEecCCCccceEEEEEEEEE
Confidence 799999999998 7 699999999999999999855677777 468999999999999999973
No 6
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.81 E-value=6e-19 Score=150.93 Aligned_cols=114 Identities=27% Similarity=0.255 Sum_probs=92.5
Q ss_pred ccEEEEEEEEEEcCCCceeeeEEEEcCCEEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecC-CCCCCHHHHHHH
Q 025584 118 IGFLKFKADIFCKETGQKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLD-DDKGDFVGTAVR 196 (250)
Q Consensus 118 ~gf~kl~~d~~~~~~G~~~p~~v~~rg~aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD-~geEt~~~AA~R 196 (250)
+.|++++.+.+..++|+...+.++.++++|+|+++ +.++ ++||++|+|.+.+...|++|||++| .| |++++||+|
T Consensus 17 ~~~~~~~~~~~~~p~G~~~~~~~~~~~~av~v~i~-~~~~--~vLLvrr~r~~~~~~~w~lPgG~ve~~g-Es~~~aa~R 92 (207)
T 1mk1_A 17 GAIFALRRDQVRMPGGGIVTREVVEHFGAVAIVAM-DDNG--NIPMVYQYRHTYGRRLWELPAGLLDVAG-EPPHLTAAR 92 (207)
T ss_dssp CSSEEEEEEEEC-----CEEEEEEEECCEEEEEEC-CTTS--EEEEEEEEETTTTEEEEECCEEECCSTT-CCHHHHHHH
T ss_pred CCEEEEEEEEEECCCCCEEEEEEEeCCCEEEEEEE-cCCC--EEEEEEeecCCCCCcEEEeCCccccCCC-CCHHHHHHH
Confidence 78999999999889999888888888899988864 5555 4999999999988889999999999 87 699999999
Q ss_pred HHHHHhCCcccccceeeccccccCCCCceeecCCccccceEEEEEEEcee
Q 025584 197 EVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAVCSFFLHSFFLFLSVE 246 (250)
Q Consensus 197 EL~EETGl~i~~~~L~~L~~l~~~~~~~~~~pspG~~dE~i~lFl~~~~e 246 (250)
|++||||+++. .+..+ ..+|..+|.+++.+++|++....
T Consensus 93 El~EEtGl~~~--~~~~l---------~~~~~~~~~~~~~~~~f~~~~~~ 131 (207)
T 1mk1_A 93 ELREEVGLQAS--TWQVL---------VDLDTAPGFSDESVRVYLATGLR 131 (207)
T ss_dssp HHHHHHCEEEE--EEEEE---------EEECSCTTTBCCCEEEEEEEEEE
T ss_pred HHHHHHCCccc--ccEEE---------EEEEcCCCccccEEEEEEEEccc
Confidence 99999999974 44445 35688999999999999987543
No 7
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.75 E-value=9.4e-18 Score=139.35 Aligned_cols=112 Identities=29% Similarity=0.381 Sum_probs=90.5
Q ss_pred ccEEEEEEEEEEcCCCce-eeeEEEEcCCEEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHH
Q 025584 118 IGFLKFKADIFCKETGQK-VPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVR 196 (250)
Q Consensus 118 ~gf~kl~~d~~~~~~G~~-~p~~v~~rg~aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~R 196 (250)
+. ++++.+.+..++|+. ..+.++.+.++|++++ ++.+++ ++|++|+|.+.+...|++|||++|.| |++++||+|
T Consensus 15 ~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~i-~~~~~~--vLL~~r~~~~~~~~~w~~PgG~ve~g-Es~~~aa~R 89 (182)
T 2yvp_A 15 EP-VRLVKERVRTHTGRELTYVYRPGPVAASFVLP-VTERGT--ALLVRQYRHPTGKFLLEVPAGKVDEG-ETPEAAARR 89 (182)
T ss_dssp SS-SCEEEEEEECTTSCEEEEEEBCSSCEEEEEEE-BCTTSE--EEEEEEEEGGGTEEEEECCEEECCTT-CCHHHHHHH
T ss_pred Cc-EEEEEEEEECCCCCEeeEEEEEecCCEEEEEE-EcCCCE--EEEEEeccCCCCCcEEEeccccCCCC-cCHHHHHHH
Confidence 44 778888888899988 6667777777777775 466654 99999999877777999999999997 699999999
Q ss_pred HHHHHhCCcccccceeeccccccCCCCceeecCCccccceEEEEEEEce
Q 025584 197 EVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAVCSFFLHSFFLFLSV 245 (250)
Q Consensus 197 EL~EETGl~i~~~~L~~L~~l~~~~~~~~~~pspG~~dE~i~lFl~~~~ 245 (250)
|+.||||+++. .+..+ +.+++.++..++.+++|++...
T Consensus 90 El~EEtGl~~~--~~~~l---------~~~~~~~~~~~~~~~~f~~~~~ 127 (182)
T 2yvp_A 90 ELREEVGAEAE--TLIPL---------PSFHPQPSFTAVVFHPFLALKA 127 (182)
T ss_dssp HHHHHHCEECS--CEEEC---------CCBCSCTTTBCCEEEEEEECSC
T ss_pred HHHHHhCCCcc--cEEEE---------EEEeCCCCccccEEEEEEEecc
Confidence 99999999874 55555 3467788888899999998743
No 8
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.72 E-value=1.7e-17 Score=133.49 Aligned_cols=88 Identities=31% Similarity=0.386 Sum_probs=72.1
Q ss_pred EcCCEEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCC
Q 025584 142 ARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPS 221 (250)
Q Consensus 142 ~rg~aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~ 221 (250)
.++++|+|+++ +.+++ ++|++|+|.+.+...|++|||++|+| |++++||+||++||||+++. .+..+
T Consensus 3 ~~~~~v~vi~~-~~~~~--vLLv~~~r~~~~~~~w~~PgG~ve~g-Et~~~aa~REl~EEtGl~~~--~~~~l------- 69 (145)
T 2w4e_A 3 RGPRAVFILPV-TAQGE--AVLIRQFRYPLRATITEIVAGGVEKG-EDLGAAAARELLEEVGGAAS--EWVPL------- 69 (145)
T ss_dssp CCCEEEEEEEE-ETTSE--EEEEEEEETTTTEEEEECEEEECCTT-CCHHHHHHHHHHHHHCEECS--EEEEC-------
T ss_pred eeCCEEEEEEE-cCCCE--EEEEEEEecCCCCCEEEeCCccCCCC-CCHHHHHHHHHHHhhCCccC--eEEEE-------
Confidence 45667777764 66654 89999999887777999999999997 69999999999999999874 45555
Q ss_pred CCceeecCCccccceEEEEEEEc
Q 025584 222 TGCKFFPSAVCSFFLHSFFLFLS 244 (250)
Q Consensus 222 ~~~~~~pspG~~dE~i~lFl~~~ 244 (250)
..++++++..++.+++|++..
T Consensus 70 --~~~~~~~~~~~~~~~~f~~~~ 90 (145)
T 2w4e_A 70 --PGFYPQPSISGVVFYPLLALG 90 (145)
T ss_dssp --CCBBSCTTTCCCEEEEEEEEE
T ss_pred --ecCcCCCCccCceEEEEEEEe
Confidence 347788898899999998863
No 9
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.67 E-value=4.9e-16 Score=127.85 Aligned_cols=102 Identities=29% Similarity=0.396 Sum_probs=81.2
Q ss_pred ccEEEEEEEEEEcCCCceeeeEEEEcCCEEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHH
Q 025584 118 IGFLKFKADIFCKETGQKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVRE 197 (250)
Q Consensus 118 ~gf~kl~~d~~~~~~G~~~p~~v~~rg~aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~RE 197 (250)
++|++++.+ ..+.++.+.++|+++++ + +++ ++|++|+|.+.+...|++|||++|+| |++++||+||
T Consensus 17 ~~~~~v~~~---------~~~~~~~~~~~v~vii~-~-~~~--vLL~~~~r~~~~~~~w~lPgG~ve~g-Es~~~aa~RE 82 (170)
T 1v8y_A 17 GRILNLALE---------GRYEIVEHKPAVAVIAL-R-EGR--MLFVRQMRPAVGLAPLEIPAGLIEPG-EDPLEAARRE 82 (170)
T ss_dssp CSSEEEEEE---------TTEEEEEECCEEEEEEE-E-TTE--EEEEECCBTTTTBCCBBCSEEECCTT-CCHHHHHHHH
T ss_pred CCeEEEEEE---------eeEEEEecCCeEEEEEE-E-CCE--EEEEEEEeCCCCCCEEECCccccCCC-CCHHHHHHHH
Confidence 678888765 23455666788888864 5 554 99999999887777899999999997 6999999999
Q ss_pred HHHHhCCcccccceeeccccccCCCCceeecCCccccceEEEEEEEce
Q 025584 198 VEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAVCSFFLHSFFLFLSV 245 (250)
Q Consensus 198 L~EETGl~i~~~~L~~L~~l~~~~~~~~~~pspG~~dE~i~lFl~~~~ 245 (250)
+.||||+ +. .+..+ ..++..++..++.+++|++...
T Consensus 83 l~EEtGl-~~--~~~~l---------~~~~~~~~~~~~~~~~f~~~~~ 118 (170)
T 1v8y_A 83 LAEQTGL-SG--DLTYL---------FSYFVSPGFTDEKTHVFLAENL 118 (170)
T ss_dssp HHHHHSE-EE--EEEEE---------EEEESCTTTBCCEEEEEEEEEE
T ss_pred HHHHHCC-Cc--Cceee---------EEEecCCCccccEEEEEEEEec
Confidence 9999999 63 55556 3567888888899999988743
No 10
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.48 E-value=2.2e-13 Score=109.13 Aligned_cols=85 Identities=29% Similarity=0.463 Sum_probs=61.0
Q ss_pred CEEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCc
Q 025584 145 PAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGC 224 (250)
Q Consensus 145 ~aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~~~ 224 (250)
+.+++.++++.+++ +||+++.+ .+...|++|||++|.| |++++||+||++||||+++...++...
T Consensus 4 p~~~v~~ii~~~~~--vLl~~r~~--~~~~~w~~PgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~~~~~---------- 68 (153)
T 3shd_A 4 PHVTVACVVHAEGK--FLVVEETI--NGKALWNQPAGHLEAD-ETLVEAAARELWEETGISAQPQHFIRM---------- 68 (153)
T ss_dssp CEEEEEEEEEETTE--EEEEEEEE--TTEEEEECSEEECCTT-CCHHHHHHHHHHHHHCCCCCCCEEEEE----------
T ss_pred CceEEEEEEEeCCE--EEEEEecC--CCCCCEECCeEEeCCC-CCHHHHHHHHHHHHHCcccccCcEEEE----------
Confidence 34444444555554 88888763 3456899999999997 699999999999999999864333222
Q ss_pred eeecCCccccceEEEEEEEc
Q 025584 225 KFFPSAVCSFFLHSFFLFLS 244 (250)
Q Consensus 225 ~~~pspG~~dE~i~lFl~~~ 244 (250)
..|..++......++|.+..
T Consensus 69 ~~~~~~~~~~~~~~~f~~~~ 88 (153)
T 3shd_A 69 HQWIAPDKTPFLRFLFAIEL 88 (153)
T ss_dssp EEECCTTSCCEEEEEEEEEC
T ss_pred EEEecCCCceEEEEEEEEEc
Confidence 23666676677777788763
No 11
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.43 E-value=5.5e-13 Score=106.33 Aligned_cols=60 Identities=30% Similarity=0.468 Sum_probs=47.5
Q ss_pred CEEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccc
Q 025584 145 PAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKL 208 (250)
Q Consensus 145 ~aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~ 208 (250)
+.+++.++++.+++ +||++|.+.+. ...|++|||.+|.| |++++||+||++||||+++..
T Consensus 7 ~~~~v~~ii~~~~~--vLl~~r~~~~~-~~~w~lPgG~ve~g-E~~~~aa~RE~~EEtGl~~~~ 66 (153)
T 2b0v_A 7 PNVTVAAVIEQDDK--YLLVEEIPRGT-AIKLNQPAGHLEPG-ESIIQACSREVLEETGHSFLP 66 (153)
T ss_dssp CEEEEEEECEETTE--EEEEEECSSSS-CCEEECSEEECCTT-SCHHHHHHHHHHHHHSEEEEE
T ss_pred CCEEEEEEEeeCCE--EEEEEEcCCCC-CCeEECCCcCcCCC-CCHHHHHHHHHHHhhCcEecc
Confidence 34444444455554 89998877665 66899999999997 699999999999999999853
No 12
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.42 E-value=1.2e-12 Score=109.92 Aligned_cols=72 Identities=21% Similarity=0.324 Sum_probs=53.3
Q ss_pred CCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCccccc
Q 025584 156 EGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAVCSFF 235 (250)
Q Consensus 156 ~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~~~~~~pspG~~dE 235 (250)
++ ++||++|.+.+. ...|++|||.+|.| |++++||+||++||||+++....+ + .++..++. +.
T Consensus 50 ~~--~vLL~~r~~~~~-~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~~--~----------~~~~~~~~-~~ 112 (189)
T 3cng_A 50 EN--KVLLCKRAIAPY-RGKWTLPAGFMENN-ETLVQGAARETLEEANARVEIREL--Y----------AVYSLPHI-SQ 112 (189)
T ss_dssp TT--EEEEEEESSSSS-TTCEECSEEECCTT-CCHHHHHHHHHHHHHCCCEEEEEE--E----------EEEEEGGG-TE
T ss_pred CC--EEEEEEccCCCC-CCeEECceeeccCC-CCHHHHHHHHHHHHHCCcccccee--E----------EEEecCCC-cE
Confidence 55 489999887654 45799999999997 699999999999999999753332 2 23444443 56
Q ss_pred eEEEEEEEc
Q 025584 236 LHSFFLFLS 244 (250)
Q Consensus 236 ~i~lFl~~~ 244 (250)
.+++|++..
T Consensus 113 ~~~~f~~~~ 121 (189)
T 3cng_A 113 VYMLFRAKL 121 (189)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 677787753
No 13
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.40 E-value=1.5e-12 Score=105.76 Aligned_cols=50 Identities=30% Similarity=0.387 Sum_probs=42.8
Q ss_pred EEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccce
Q 025584 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDM 211 (250)
Q Consensus 160 ~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L 211 (250)
++||+++.+.+ ....|++|||.+|.| |++++||+||++||||+++...++
T Consensus 41 ~vLL~~r~~~~-~~~~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~~ 90 (157)
T 4dyw_A 41 RILLIKRKRAP-EAGCWGLPGGKVDWL-EPVERAVCREIEEELGIALERATL 90 (157)
T ss_dssp EEEEEEECSSS-STTCEECCEEECCTT-CCHHHHHHHHHHHHHSCEEESCEE
T ss_pred EEEEEEecCCC-CCCEEECCcccCCCC-CCHHHHHHHHHHHHHCcccccCcE
Confidence 49999988766 566899999999997 699999999999999999864433
No 14
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.38 E-value=2.3e-12 Score=102.85 Aligned_cols=61 Identities=20% Similarity=0.209 Sum_probs=46.1
Q ss_pred cCCEEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccc
Q 025584 143 RGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKL 208 (250)
Q Consensus 143 rg~aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~ 208 (250)
+..+|.|+++...+++.++||+++.+. ..|++|||++|.| |++++||+||++||||+++..
T Consensus 4 ~~~~v~vvi~~~~~~~~~vLl~~r~~~----g~w~~PgG~ve~g-E~~~~aa~REl~EEtGl~~~~ 64 (149)
T 3son_A 4 QPFQVLVIPFIKTEANYQFGVLHRTDA----DVWQFVAGGGEDE-EAISETAKRESIEELNLDVDV 64 (149)
T ss_dssp CCCEEEEEEEEECSSSEEEEEEEESSS----SCEECEEEECCTT-CCHHHHHHHHHHHHHTCCSCC
T ss_pred CceEEEEEEEEecCCCeEEEEEEEcCC----CCEeCCccccCCC-CCHHHHHHHHHHHHhCCCccc
Confidence 345666665433333335888877542 5799999999997 699999999999999999864
No 15
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.38 E-value=1.9e-12 Score=102.16 Aligned_cols=60 Identities=25% Similarity=0.401 Sum_probs=47.6
Q ss_pred EEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeec
Q 025584 152 LLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDL 214 (250)
Q Consensus 152 il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L 214 (250)
+++.+++ ++|+++.+.......|++|||.+|.| |++.+||+||+.||||+.+...++..+
T Consensus 15 i~~~~~~--vLl~~r~~~~~~~g~w~lPgG~ve~g-E~~~~aa~RE~~EE~Gl~~~~~~~~~~ 74 (144)
T 3r03_A 15 LIDPDGR--VLLAQRPPGKSLAGLWEFPGGKLEPG-ETPEAALVRELAEELGVDTRASCLAPL 74 (144)
T ss_dssp EBCTTSC--EEEEECCTTSSSTTCEECSEEECCTT-CCHHHHHHHHHHHHHCCBCCGGGCEEE
T ss_pred EEcCCCE--EEEEEeCCCCCCCCcEECCCcEecCC-CCHHHHHHHHHHHHhCceeeccceEEE
Confidence 3465665 88888765555566899999999997 699999999999999999875555444
No 16
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.38 E-value=2.3e-12 Score=103.29 Aligned_cols=84 Identities=27% Similarity=0.459 Sum_probs=56.6
Q ss_pred EEEEEEEEcCCCceEEEEEEeee---cCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCC
Q 025584 146 AVAVLILLDSEGETYAILTEQVR---VPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPST 222 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R---~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~ 222 (250)
+|++++ ++.+++ ++|+++.+ .+.....|++|||.+|.| |++++||+||+.||||+.+. .+..++.+
T Consensus 15 ~~~~vi-~~~~~~--vLl~~r~~~~~~~~~~~~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~--~~~~l~~~----- 83 (159)
T 1sjy_A 15 AAGVVL-LNERGD--ILLVQEKGIPGHPEKAGLWHIPSGAVEDG-ENPQDAAVREACEETGLRVR--PVKFLGAY----- 83 (159)
T ss_dssp EEEEEE-BCTTCC--EEEEEESCC----CCCCCEECSEEECCTT-SCHHHHHHHHHHHHHSCCEE--EEEEEEEE-----
T ss_pred eEEEEE-EeCCCC--EEEEEecccCcCCCCCCeEECCccccCCC-CCHHHHHHHHHHHHHCccce--eeEEEEEE-----
Confidence 344443 455565 88998887 334556899999999997 69999999999999999985 33334221
Q ss_pred CceeecCCccccceEEEEEEE
Q 025584 223 GCKFFPSAVCSFFLHSFFLFL 243 (250)
Q Consensus 223 ~~~~~pspG~~dE~i~lFl~~ 243 (250)
...++ .| ....+++|.+.
T Consensus 84 -~~~~~-~~-~~~~~~~f~~~ 101 (159)
T 1sjy_A 84 -LGRFP-DG-VLILRHVWLAE 101 (159)
T ss_dssp -EEECT-TS-CEEEEEEEEEE
T ss_pred -ecccC-CC-ceEEEEEEEEE
Confidence 11122 23 55677778775
No 17
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.36 E-value=1.3e-12 Score=110.48 Aligned_cols=89 Identities=20% Similarity=0.270 Sum_probs=51.1
Q ss_pred EEEcCCEEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeecccccc
Q 025584 140 VFARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLY 219 (250)
Q Consensus 140 v~~rg~aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~ 219 (250)
.....-+|+++++.+.++ ++||+++ |.+ ....|++|||++|+| |++++||+||++||||+++...++..+
T Consensus 22 ~~~~~v~v~~~v~~~~~~--~vLL~~r-~~~-~~g~w~lPGG~ve~g-Es~~~aA~REl~EEtGl~~~~~~l~~~----- 91 (199)
T 3h95_A 22 SMSHQVGVAGAVFDESTR--KILVVQD-RNK-LKNMWKFPGGLSEPE-EDIGDTAVREVFEETGIKSEFRSVLSI----- 91 (199)
T ss_dssp ----CCEEEEEEEETTTT--EEEEEEE-SSS-STTSBBCCEEECCTT-CCHHHHHHHHHHHHHCCCEEEEEEEEE-----
T ss_pred cCcccceEEEEEEeCCCC--EEEEEEE-cCC-CCCCEECCccccCCC-CCHHHHHHHHHHHHhCCccccceEEEE-----
Confidence 334445666665433334 3666654 444 345799999999997 699999999999999999864444333
Q ss_pred CCCCceeecCCccccceEEEEEE
Q 025584 220 PSTGCKFFPSAVCSFFLHSFFLF 242 (250)
Q Consensus 220 ~~~~~~~~pspG~~dE~i~lFl~ 242 (250)
...+..|+.......+|++
T Consensus 92 ----~~~~~~~~~~~~~~~~~~~ 110 (199)
T 3h95_A 92 ----RQQHTNPGAFGKSDMYIIC 110 (199)
T ss_dssp ----EECC---------CEEEEE
T ss_pred ----EeeecCCCCceeEEEEEEE
Confidence 2335666655444444444
No 18
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.36 E-value=3.5e-12 Score=100.92 Aligned_cols=74 Identities=14% Similarity=0.125 Sum_probs=49.0
Q ss_pred CCceEEEEEEeeecCC--CCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCccc
Q 025584 156 EGETYAILTEQVRVPT--GRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAVCS 233 (250)
Q Consensus 156 ~~~~~VlLvrQ~R~p~--~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~~~~~~pspG~~ 233 (250)
+++ +||+++.+.+. ....|++|||.+|.| |++++||+||++||||+.+.. +..++.+ .+..+ ..
T Consensus 16 ~~~--vLL~~r~~~~~~~~~g~w~lPgG~ve~g-E~~~~aa~REl~EE~Gl~~~~--~~~~~~~--------~~~~~-~~ 81 (140)
T 3gwy_A 16 GEK--YLCVQRGQTKFSYTSFRYEFPGGKVEEG-ESLQEALQREIMEEMDYVIEV--GEKLLTV--------HHTYP-DF 81 (140)
T ss_dssp TTE--EEEEEC---------CCEECSEEECCTT-CCHHHHHHHHHHHHHCCCEEE--EEEEEEE--------ECCCS-SC
T ss_pred CCE--EEEEEecCCCCCCCCCeEECCCccCCCC-CCHHHHHHHHHHHhhCcEEEe--ceEEEEE--------EEEeC-Cc
Confidence 554 88998887765 566899999999997 699999999999999999853 3333211 12222 34
Q ss_pred cceEEEEEEE
Q 025584 234 FFLHSFFLFL 243 (250)
Q Consensus 234 dE~i~lFl~~ 243 (250)
...+++|.+.
T Consensus 82 ~~~~~~f~~~ 91 (140)
T 3gwy_A 82 EITMHAFLCH 91 (140)
T ss_dssp CEEEEEEEEE
T ss_pred eEEEEEEEEE
Confidence 5566777775
No 19
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.36 E-value=2.2e-12 Score=103.71 Aligned_cols=53 Identities=26% Similarity=0.399 Sum_probs=43.8
Q ss_pred EEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccc
Q 025584 152 LLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKL 208 (250)
Q Consensus 152 il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~ 208 (250)
+++.++ ++||+++.+.+ ....|++|||++|.| |++++||+||++||||+++..
T Consensus 27 i~~~~~--~vLl~~r~~~~-~~~~w~~PgG~ve~g-E~~~~aa~REl~EEtGl~~~~ 79 (156)
T 3gg6_A 27 FLSEQD--EVLLIQEAKRE-CRGSWYLPAGRMEPG-ETIVEALQREVKEEAGLHCEP 79 (156)
T ss_dssp CBCTTS--EEEEEECCCTT-STTCEECSEEECCTT-CCHHHHHHHHHHHHHCEEEEE
T ss_pred EEeCCC--EEEEEEecCCC-CCCEEECCeeeccCC-CCHHHHHHHHHHHhhCceeEe
Confidence 345555 48999887755 456899999999997 699999999999999999853
No 20
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.35 E-value=5.1e-12 Score=101.42 Aligned_cols=56 Identities=30% Similarity=0.408 Sum_probs=45.0
Q ss_pred EcCCCceEEEEEEeeec-CCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccce
Q 025584 153 LDSEGETYAILTEQVRV-PTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDM 211 (250)
Q Consensus 153 l~~~~~~~VlLvrQ~R~-p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L 211 (250)
++.+++ +||+++.+. +.....|++|||.+|.| |++++||+||++||||+.+....+
T Consensus 16 ~~~~~~--vLL~~r~~~~~~~~g~w~~PgG~ve~g-E~~~~aa~REl~EE~Gl~~~~~~~ 72 (153)
T 3grn_A 16 RNEKGE--FLLLRRSENSRTNAGKWDLPGGKVNPD-ESLKEGVAREVWEETGITMVPGDI 72 (153)
T ss_dssp ECTTCC--EEEEEECTTCSSSTTCEECSEEECCTT-CCHHHHHHHHHHHHHCCCCCCCSE
T ss_pred EcCCCc--EEEEEEcCCCCCCCCeEECceeecCCC-CCHHHHHHhhhhhhhCcEeecceE
Confidence 455665 888887664 44566899999999997 699999999999999999864443
No 21
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.35 E-value=1.6e-12 Score=108.80 Aligned_cols=85 Identities=22% Similarity=0.207 Sum_probs=56.3
Q ss_pred EEEEEEEEcCCCceEEEEEEeeec-CCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCc
Q 025584 146 AVAVLILLDSEGETYAILTEQVRV-PTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGC 224 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~-p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~~~ 224 (250)
+++++++ +.+++.+++|++|.+. ......|++|||++|.| |++++||+||++||||+++. .+..++.
T Consensus 36 ~~~~v~i-~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~--~~~~l~~-------- 103 (194)
T 1nqz_A 36 AAVLVAL-TREADPRVLLTVRSSELPTHKGQIAFPGGSLDAG-ETPTQAALREAQEEVALDPA--AVTLLGE-------- 103 (194)
T ss_dssp EEEEEEE-ESSSSCBBCEEEEC------CCCEECSEEECCTT-CCHHHHHHHHHHHHHCCCGG--GCEEEEE--------
T ss_pred EEEEEEE-ecCCCeEEEEEEecCCCCCCCCeEECCcccCCCC-CCHHHHHHHHHHHHHCCCcc--ceEEEEE--------
Confidence 4444444 6566334888887542 23445799999999997 69999999999999999975 4444432
Q ss_pred eeecCCccccceEEEEEEE
Q 025584 225 KFFPSAVCSFFLHSFFLFL 243 (250)
Q Consensus 225 ~~~pspG~~dE~i~lFl~~ 243 (250)
+....+..+..+++|++.
T Consensus 104 -~~~~~~~~~~~~~~f~~~ 121 (194)
T 1nqz_A 104 -LDDVFTPVGFHVTPVLGR 121 (194)
T ss_dssp -CCCEEETTTEEEEEEEEE
T ss_pred -ccCccCCCCeEEEEEEEE
Confidence 222223456778888875
No 22
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.34 E-value=6e-12 Score=99.30 Aligned_cols=43 Identities=35% Similarity=0.626 Sum_probs=37.6
Q ss_pred EEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCccc
Q 025584 161 AILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLK 207 (250)
Q Consensus 161 VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~ 207 (250)
+||++|.+.+.+ |++|||++|.| |++++||+||+.||||+++.
T Consensus 27 vLl~~r~~~~~~---w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~ 69 (139)
T 2yyh_A 27 IVLIERKYPPVG---LALPGGFVEVG-ERVEEAAAREMREETGLEVR 69 (139)
T ss_dssp EEEEEECSSSCS---EECCEEECCTT-CCHHHHHHHHHHHHHCCCCE
T ss_pred EEEEEecCCCCc---EECccccCCCC-CCHHHHHHHHHHHHHCCCcc
Confidence 888888765432 99999999997 69999999999999999975
No 23
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.34 E-value=4.7e-13 Score=115.19 Aligned_cols=107 Identities=12% Similarity=0.089 Sum_probs=68.8
Q ss_pred ccEEEEEEEEEEcCCCceeeeEEEEcCCEEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCC-CHHHHHHH
Q 025584 118 IGFLKFKADIFCKETGQKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKG-DFVGTAVR 196 (250)
Q Consensus 118 ~gf~kl~~d~~~~~~G~~~p~~v~~rg~aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geE-t~~~AA~R 196 (250)
+.|+.+ .+.+..++|....+.++..+++++++++++.++ .++|+++ ....|++|||.+|.| | ++++||+|
T Consensus 18 ~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~vv~~i~~~~~--~vLl~~r-----~~g~w~~PGG~ve~g-E~t~~~aa~R 88 (212)
T 1u20_A 18 PRNISR-EESLQLEGYKHACHALLHAPSQAKLFDRVPIRR--VLLMMMR-----FDGRLGFPGGFVDTR-DISLEEGLKR 88 (212)
T ss_dssp SEECCH-HHHHSCSSCEEEEEEEEEEECCCEETTTEECCE--EEEEEEE-----TTSCEECSEEEECTT-TSCHHHHHHH
T ss_pred cccCCH-HHHhhcCCCcccceEEEeCCCceEEEEEEecCC--EEEEEEe-----CCCeEECCCcccCCC-CCCHHHHHHH
Confidence 455555 355566788776655544444444444445444 3666654 245799999999997 7 99999999
Q ss_pred HHHHHhCCccccccee---eccccccCCCCceeecCCccccceEEEEEEE
Q 025584 197 EVEEETGIQLKLEDMI---DLTAFLYPSTGCKFFPSAVCSFFLHSFFLFL 243 (250)
Q Consensus 197 EL~EETGl~i~~~~L~---~L~~l~~~~~~~~~~pspG~~dE~i~lFl~~ 243 (250)
|++||||+.+...++. .+.. ..+..+ ....+++|++.
T Consensus 89 El~EEtGl~~~~~~l~~~~~~~~--------~~~~~~--~~~~~~~f~~~ 128 (212)
T 1u20_A 89 ELEEELGPALATVEVTEDDYRSS--------QVREHP--QKCVTHFYIKE 128 (212)
T ss_dssp HHHHHHCGGGGGCCCCGGGEEEE--------EEECTT--SCEEEEEEEEE
T ss_pred HHHHHHCCCccccceeeeeEEEe--------ccccCC--CcEEEEEEEEE
Confidence 9999999998643321 2211 112222 56778888876
No 24
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.34 E-value=7.8e-12 Score=100.28 Aligned_cols=64 Identities=19% Similarity=0.283 Sum_probs=47.4
Q ss_pred EEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeec
Q 025584 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDL 214 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L 214 (250)
+|++++ ++.+++ +||+++.+.+ ....|++|||.+|.| |++++||+||++||||+.+....+..+
T Consensus 20 ~v~~vi-~~~~~~--vLl~~r~~~~-~~g~w~~PgG~ve~g-E~~~~aa~REl~EEtGl~~~~~~~~~~ 83 (160)
T 1rya_A 20 SLDFIV-ENSRGE--FLLGKRTNRP-AQGYWFVPGGRVQKD-ETLEAAFERLTMAELGLRLPITAGQFY 83 (160)
T ss_dssp EEEEEE-ECTTSC--EEEEEECSSS-STTSEECCEEECCTT-CCHHHHHHHHHHHHHSSCCCGGGSEEE
T ss_pred EEEEEE-EcCCCE--EEEEeccCCC-CCCEEECCccccCCC-CCHHHHHHHHHHHHHCCCCCcccceEE
Confidence 344443 455565 8888876644 355799999999997 699999999999999999643344444
No 25
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.33 E-value=3.8e-12 Score=102.69 Aligned_cols=61 Identities=25% Similarity=0.463 Sum_probs=48.0
Q ss_pred EEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeec
Q 025584 151 ILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDL 214 (250)
Q Consensus 151 ~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L 214 (250)
++++.+++ +||+++.+.......|++|||.+|.| |++++||+||+.||||+.+...++..+
T Consensus 35 ~i~~~~~~--vLL~~r~~~~~~~g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~~~~~~~~ 95 (158)
T 3hhj_A 35 ALLDQDNR--VLLTQRPEGKSLAGLWEFPGGKVEQG-ETPEASLIRELEEELGVHVQADNLFPL 95 (158)
T ss_dssp EEBCTTSE--EEEEECCCTTSCCCCCBCCEEECCTT-CCHHHHHHHHHHHHHCCBCCGGGCEEE
T ss_pred EEEeCCCE--EEEEEeCCCCCCCCEEECCceeecCC-CCHHHHHHHHHHHHhCcEeecceEEEE
Confidence 33455554 88888766555566899999999997 699999999999999999875555444
No 26
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.33 E-value=6e-12 Score=104.61 Aligned_cols=63 Identities=19% Similarity=0.244 Sum_probs=47.1
Q ss_pred EEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeec
Q 025584 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDL 214 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L 214 (250)
.++++++++.+++ +||+++.+. .....|++|||.+|.| |++++||+||++||||+++. .+..+
T Consensus 25 ~~~~~~vi~~~~~--vLL~~r~~~-~~~g~W~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~--~~~~l 87 (176)
T 3q93_A 25 RLYTLVLVLQPQR--VLLGMKKRG-FGAGRWNGFGGKVQEG-ETIEDGARRELQEESGLTVD--ALHKV 87 (176)
T ss_dssp EEEEEEEEECSSE--EEEEEECSS-TTTTSEECEEEECCTT-SCHHHHHHHHHHHHHSCEES--CCEEE
T ss_pred cEEEEEEEEeCCE--EEEEEEcCC-CCCCeEECceecCCCC-CCHHHHHHHHHHHHHCCcce--eeEEE
Confidence 3444444555554 888877554 3556899999999997 69999999999999999985 34444
No 27
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.33 E-value=7.3e-12 Score=98.10 Aligned_cols=58 Identities=24% Similarity=0.260 Sum_probs=42.2
Q ss_pred EEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCccc
Q 025584 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLK 207 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~ 207 (250)
+|+++++.+.+++.++||+++. .+...|++|||++|.| |++++||+||++||||+.+.
T Consensus 5 ~~~~vi~~~~~~~~~vLl~~r~---~~~~~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~ 62 (138)
T 1ktg_A 5 AAGLVIYRKLAGKIEFLLLQAS---YPPHHWTPPKGHVDPG-EDEWQAAIRETKEEANITKE 62 (138)
T ss_dssp EEEEEEEEEETTEEEEEEEEES---STTCCEESSEEECCTT-CCHHHHHHHHHHHHHCCCGG
T ss_pred EEEEEEEEecCCCcEEEEEEcc---CCCCcEeCCccccCCC-CCHHHHHHHHHHHHHCCCcc
Confidence 4555554333333357777653 2345799999999997 69999999999999999764
No 28
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.33 E-value=1.3e-12 Score=117.12 Aligned_cols=82 Identities=23% Similarity=0.284 Sum_probs=61.1
Q ss_pred CEEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCc
Q 025584 145 PAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGC 224 (250)
Q Consensus 145 ~aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~~~ 224 (250)
.+|++++ ++.++. ++||++|+|.+ ..|++|||++|+| |++++||+||++||||+++.. +..+
T Consensus 102 ~~v~avv-~~~~~~-~vLLv~r~~~~---g~W~lPgG~ve~g-Es~~eAA~REl~EEtGl~~~~--l~~~---------- 163 (271)
T 2a6t_A 102 PVRGAIM-LDMSMQ-QCVLVKGWKAS---SGWGFPKGKIDKD-ESDVDCAIREVYEETGFDCSS--RINP---------- 163 (271)
T ss_dssp CEEEEEE-BCSSSS-EEEEEEESSTT---CCCBCSEEECCTT-CCHHHHHHHHHHHHHCCCCTT--TCCT----------
T ss_pred CeEEEEE-EECCCC-EEEEEEEeCCC---CeEECCcccCCCC-cCHHHHHHHHHHHHhCCCcee--eeee----------
Confidence 4555554 354322 59999987743 4699999999997 699999999999999999853 3333
Q ss_pred eeecCCccccceEEEEEEEc
Q 025584 225 KFFPSAVCSFFLHSFFLFLS 244 (250)
Q Consensus 225 ~~~pspG~~dE~i~lFl~~~ 244 (250)
..|++++..++.+++|++..
T Consensus 164 ~~~~~~~~~~~~~~~f~~~~ 183 (271)
T 2a6t_A 164 NEFIDMTIRGQNVRLYIIPG 183 (271)
T ss_dssp TCEEEEEETTEEEEEEEECC
T ss_pred eeeccCCcCCceEEEEEEEE
Confidence 25677777788888888764
No 29
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.32 E-value=4.3e-12 Score=98.74 Aligned_cols=81 Identities=20% Similarity=0.301 Sum_probs=55.7
Q ss_pred EEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCce
Q 025584 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCK 225 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~~~~ 225 (250)
+|++++ .+ ++ +++|+++.+ ..|++|||.+|.| |++.+||+||++||||+++.. +..++.+ ..
T Consensus 6 ~~~~vi-~~-~~--~vLl~~r~~-----~~w~~PgG~ve~g-E~~~~aa~RE~~EE~Gl~~~~--~~~~~~~------~~ 67 (134)
T 2pbt_A 6 SAGGVL-FK-DG--EVLLIKTPS-----NVWSFPKGNIEPG-EKPEETAVREVWEETGVKGEI--LDYIGEI------HY 67 (134)
T ss_dssp EEEEEE-EE-TT--EEEEEECTT-----SCEECCEEECCTT-CCHHHHHHHHHHHHHSEEEEE--EEEEEEE------EE
T ss_pred EEEEEE-EE-CC--EEEEEEeCC-----CcEECCccccCCC-CCHHHHHHHHHHHHHCCccEE--eeeeeEE------EE
Confidence 344443 34 44 488888754 5799999999997 699999999999999999853 3333221 23
Q ss_pred eecCCc-cccceEEEEEEEc
Q 025584 226 FFPSAV-CSFFLHSFFLFLS 244 (250)
Q Consensus 226 ~~pspG-~~dE~i~lFl~~~ 244 (250)
.++++| .....+++|.+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~ 87 (134)
T 2pbt_A 68 WYTLKGERIFKTVKYYLMKY 87 (134)
T ss_dssp EEEETTEEEEEEEEEEEEEE
T ss_pred EeeCCCcEEEEEEEEEEEEe
Confidence 455555 3455667777754
No 30
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.31 E-value=1.2e-11 Score=101.08 Aligned_cols=86 Identities=15% Similarity=0.202 Sum_probs=56.7
Q ss_pred EEEEEEEEcCCCceEEEEEEeee-cCCCCcEEE-ecceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCC
Q 025584 146 AVAVLILLDSEGETYAILTEQVR-VPTGRVILE-LPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTG 223 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R-~p~~~~~~E-lPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~~ 223 (250)
+|++++ ++.+++ ++|+++.. .......|+ +|||.+|.| |++.+||+||++||||+++...++..+..+.
T Consensus 36 ~v~v~i-~~~~~~--vLl~~r~~~~~~~~g~w~~~PgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~l~~~~~~~----- 106 (171)
T 1q27_A 36 VVNAFL-RNSQGQ--LWIPRRSPSKSLFPNALDVSVGGAVQSG-ETYEEAFRREAREELNVEIDALSWRPLASFS----- 106 (171)
T ss_dssp EEEEEE-EETTTE--EEECCSCCSSSCCCCSCCCSEEEECSSS-SCHHHHHHHHHHHHHSCTTSSSCEEEEEEEC-----
T ss_pred EEEEEE-ECCCCe--EEEEEecCCCCCCCCccccccCccccCC-CCHHHHHHHHHHHHHCCcccccceEEEEEEe-----
Confidence 344443 466654 77765422 222345799 999999997 6999999999999999998765566663210
Q ss_pred ceeecCCccccceEEEEEEEc
Q 025584 224 CKFFPSAVCSFFLHSFFLFLS 244 (250)
Q Consensus 224 ~~~~pspG~~dE~i~lFl~~~ 244 (250)
.|..++ ...+++|.+..
T Consensus 107 --~~~~~~--~~~~~~f~~~~ 123 (171)
T 1q27_A 107 --PFQTTL--SSFMCVYELRS 123 (171)
T ss_dssp --SSSSCC--SSEEEEEEEEC
T ss_pred --ccCCCC--ccEEEEEEEEE
Confidence 023333 33777787754
No 31
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.31 E-value=6.4e-12 Score=100.87 Aligned_cols=56 Identities=23% Similarity=0.490 Sum_probs=44.8
Q ss_pred CEEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCccc
Q 025584 145 PAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLK 207 (250)
Q Consensus 145 ~aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~ 207 (250)
.+|++++ ++.+++ +||+++.+.+ ..|++|||.+|.| |++++||+||++||||+++.
T Consensus 15 ~~v~~~i-~~~~~~--vLl~~r~~~~---g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~ 70 (165)
T 1f3y_A 15 RNVGICL-MNNDKK--IFAASRLDIP---DAWQMPQGGIDEG-EDPRNAAIRELREETGVTSA 70 (165)
T ss_dssp CEEEEEE-ECTTSC--EEEEEETTEE---EEEECCEEECCTT-CCHHHHHHHHHHHHHCCCSE
T ss_pred eeEEEEE-ECCCCc--EEEEecCCCC---CcEECCeeccCCC-CCHHHHHHHHHHHhhCCChh
Confidence 4566654 466665 8888875433 5899999999997 69999999999999999863
No 32
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.30 E-value=1.1e-11 Score=101.10 Aligned_cols=44 Identities=27% Similarity=0.459 Sum_probs=38.6
Q ss_pred EEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCccc
Q 025584 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLK 207 (250)
Q Consensus 160 ~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~ 207 (250)
++||++|.+. ...|++|||.+|+| |++++||+||++||||+++.
T Consensus 35 ~vLL~~r~~~---~~~w~~PgG~ve~g-Es~~~aa~REl~EEtGl~~~ 78 (171)
T 3id9_A 35 KVLLVKQKVA---NRDWSLPGGRVENG-ETLEEAMIREMREETGLEVK 78 (171)
T ss_dssp EEEEEECSST---TCCEECCEEECCTT-CCHHHHHHHHHHHHHCCCEE
T ss_pred EEEEEEEECC---CCeEECCCccCCCC-CCHHHHHHHHHHHHHCCccc
Confidence 4899988763 45799999999997 69999999999999999975
No 33
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.30 E-value=8.9e-12 Score=98.83 Aligned_cols=55 Identities=20% Similarity=0.354 Sum_probs=44.7
Q ss_pred EcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccc
Q 025584 153 LDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLED 210 (250)
Q Consensus 153 l~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~ 210 (250)
++.+++ +||+++.+.+.....|++|||.+|.| |++.+||+||+.||||+.+....
T Consensus 29 ~~~~~~--vLl~~r~~~~~~~g~w~~PgG~ve~g-E~~~~aa~RE~~EE~Gl~~~~~~ 83 (153)
T 3ees_A 29 LRKDGK--ILVGQRPENNSLAGQWEFPGGKIENG-ETPEEALARELNEELGIEAEVGE 83 (153)
T ss_dssp EEETTE--EEEEECCTTSTTTTCEECSEEECCTT-CCHHHHHHHHHHHHHSCEEECCC
T ss_pred EEECCE--EEEEEeCCCCCCCCeEECCceeeCCC-CCHHHHHHHHHHHHHCCccccCc
Confidence 355554 88888876655567899999999997 69999999999999999986433
No 34
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.30 E-value=9.3e-12 Score=99.42 Aligned_cols=53 Identities=28% Similarity=0.455 Sum_probs=40.5
Q ss_pred EEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccc
Q 025584 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKL 208 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~ 208 (250)
+++++++ + +++ +||+++. ...|++|||++|+| |++.+||+||++||||+++..
T Consensus 6 aag~vv~-~-~~~--vLL~~r~-----~g~W~~PgG~ve~g-Et~~~aa~RE~~EEtGl~~~~ 58 (134)
T 3i7u_A 6 SAGGVLF-K-DGE--VLLIKTP-----SNVWSFPKGNIEPG-EKPEETAVREVWEETGVKGEI 58 (134)
T ss_dssp EEEEEEE-E-TTE--EEEEECT-----TSCEECCEEECCTT-CCHHHHHHHHHHHHHSEEEEE
T ss_pred EEEEEEE-E-CCE--EEEEEeC-----CCcEECCeeEecCC-CCHHHHHHHHHHHhcCceEEE
Confidence 4444433 3 454 8888642 23699999999997 699999999999999999853
No 35
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.28 E-value=1.6e-11 Score=99.62 Aligned_cols=57 Identities=23% Similarity=0.256 Sum_probs=40.9
Q ss_pred EcCCCceEEEEEEee-ecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCccccccee
Q 025584 153 LDSEGETYAILTEQV-RVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMI 212 (250)
Q Consensus 153 l~~~~~~~VlLvrQ~-R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~ 212 (250)
++.+++ +||+++. +.+.....|++|||.+|.| |++++||+||++||||+++....+.
T Consensus 35 i~~~~~--vLL~~r~~~~~~~~g~w~lPgG~ve~g-E~~~~aa~REl~EEtGl~~~~~~~~ 92 (165)
T 3oga_A 35 IQNDGC--YLLCKMADNRGVFPGQWALSGGGVEPG-ERIEEALRREIREELGEQLILSDIT 92 (165)
T ss_dssp EEETTE--EEEEEECC------CCEECCCEECCTT-CCHHHHHHHHHHHHHCSSCCEEEEE
T ss_pred EeCCCE--EEEEEecCCCCCCCCeEECCccccCCC-CCHHHHHHHHHHHHhCCCcccccee
Confidence 355554 7777654 3333456899999999997 6999999999999999998644443
No 36
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.27 E-value=1.8e-11 Score=94.37 Aligned_cols=78 Identities=18% Similarity=0.295 Sum_probs=52.6
Q ss_pred EEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCce
Q 025584 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCK 225 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~~~~ 225 (250)
+|++++ ++.+++ ++|+++.+ ..|++|||++|.| |++.+||+||+.||||+.+.. +..++. .
T Consensus 4 ~~~~vi-~~~~~~--vLl~~r~~-----g~w~~PgG~ve~g-E~~~~aa~RE~~EE~Gl~~~~--~~~~~~--------~ 64 (126)
T 1vcd_A 4 GAGGVV-FNAKRE--VLLLRDRM-----GFWVFPKGHPEPG-ESLEEAAVREVWEETGVRAEV--LLPLYP--------T 64 (126)
T ss_dssp EEEEEE-ECTTSC--EEEEECTT-----SCEECCEECCCTT-CCHHHHHHHHHHHHHCCEEEE--EEEEEE--------E
T ss_pred EEEEEE-EcCCCE--EEEEEECC-----CCccCCcCcCCCC-CCHHHHHHHHHHHhhCcEeee--ccEEeE--------E
Confidence 344443 465664 88887643 3699999999997 699999999999999999853 333321 1
Q ss_pred eecCCccccceEEEEEEE
Q 025584 226 FFPSAVCSFFLHSFFLFL 243 (250)
Q Consensus 226 ~~pspG~~dE~i~lFl~~ 243 (250)
.|..++. ...+++|.+.
T Consensus 65 ~~~~~~~-~~~~~~~~~~ 81 (126)
T 1vcd_A 65 RYVNPKG-VEREVHWFLM 81 (126)
T ss_dssp EEECTTS-CEEEEEEEEE
T ss_pred EEecCCc-eEEEEEEEEE
Confidence 2444443 3455666663
No 37
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.27 E-value=1.9e-11 Score=101.97 Aligned_cols=48 Identities=23% Similarity=0.263 Sum_probs=40.6
Q ss_pred eEEEEEEeeec------CCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCccc
Q 025584 159 TYAILTEQVRV------PTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLK 207 (250)
Q Consensus 159 ~~VlLvrQ~R~------p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~ 207 (250)
.++||+++.+. ......|++|||.+|.| |++++||+||++||||+++.
T Consensus 46 ~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~g-Es~~~aa~REl~EEtGl~~~ 99 (187)
T 3i9x_A 46 LHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDEN-ESAEQAAERELEEETSLTDI 99 (187)
T ss_dssp EEEEEEECCSBCTTSSBCTTTTCEECSEEECCTT-SCHHHHHHHHHHHHHCCCSC
T ss_pred CEEEEEEEccccccccCCCCCCEEECCceeCCCC-CCHHHHHHHHHHHHHCCCCc
Confidence 46899988653 34556899999999997 69999999999999999874
No 38
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.27 E-value=8.9e-12 Score=100.54 Aligned_cols=54 Identities=31% Similarity=0.434 Sum_probs=40.0
Q ss_pred EEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccc
Q 025584 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKL 208 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~ 208 (250)
+|++++ ++.+++ +||+++. ...|++|||.+|.| |++++||+||++||||+++..
T Consensus 23 ~v~~ii-~~~~~~--vLL~~r~-----~~~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~ 76 (153)
T 3eds_A 23 SVAAVI-KNEQGE--ILFQYPG-----GEYWSLPAGAIELG-ETPEEAVVREVWEETGLKVQV 76 (153)
T ss_dssp EEEEEE-BCTTCC--EEEECC--------CBBCSEEECCTT-SCHHHHHHHHHHHHHCEEEEE
T ss_pred eEEEEE-EcCCCe--EEEEEcC-----CCcEECCccccCCC-CCHHHHHHHHHHHHHCcccee
Confidence 344443 465665 7775443 45799999999997 699999999999999999853
No 39
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.27 E-value=2.4e-11 Score=100.01 Aligned_cols=81 Identities=22% Similarity=0.347 Sum_probs=56.5
Q ss_pred EEEEEEEEcCCCceEEEEEEeeecCCC---CcEEEe-cceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCC
Q 025584 146 AVAVLILLDSEGETYAILTEQVRVPTG---RVILEL-PAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPS 221 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~p~~---~~~~El-PAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~ 221 (250)
++++++ ++.+++ +||++ |.+.+ ...|++ |||++|.| |++.+||+||++||||+.+. .+..++
T Consensus 39 ~~~v~i-~~~~~~--vLl~~--R~~~~~~~~g~w~l~pGG~ve~g-E~~~~aa~REl~EEtGl~~~--~~~~l~------ 104 (180)
T 2fkb_A 39 ATYIVV-HDGMGK--ILVQR--RTETKDFLPGMLDATAGGVVQAD-EQLLESARREAEEELGIAGV--PFAEHG------ 104 (180)
T ss_dssp EEEEEE-ECSSSC--EEEEE--ECSSCSSSTTCEESSBCCBCBTT-CCHHHHHHHHHHHHHCCBSC--CCEEEE------
T ss_pred EEEEEE-ECCCCE--EEEEE--CCCCCccCCCcEEeecCCCCCCC-CCHHHHHHHHHHHHHCCCcc--ceEEEE------
Confidence 444544 466665 66644 44332 347999 99999997 69999999999999999864 444442
Q ss_pred CCceeecCCccccceEEEEEEE
Q 025584 222 TGCKFFPSAVCSFFLHSFFLFL 243 (250)
Q Consensus 222 ~~~~~~pspG~~dE~i~lFl~~ 243 (250)
.++..++..+..+++|++.
T Consensus 105 ---~~~~~~~~~~~~~~~f~~~ 123 (180)
T 2fkb_A 105 ---QFYFEDKNCRVWGALFSCV 123 (180)
T ss_dssp ---EEEEEETTEEEEEEEEEEE
T ss_pred ---EEEecCCCceEEEEEEEEe
Confidence 3444455667777888875
No 40
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.27 E-value=1.7e-11 Score=99.80 Aligned_cols=49 Identities=29% Similarity=0.390 Sum_probs=39.2
Q ss_pred EEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccc
Q 025584 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLED 210 (250)
Q Consensus 160 ~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~ 210 (250)
++||+++.+.+.. ..|++|||.+|.| |++++||+||++||||+.+...+
T Consensus 24 ~vLL~~r~~~~~~-g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~ 72 (161)
T 3exq_A 24 RVLVEDKVNVPWK-AGHSFPGGHVEVG-EPCATAAIREVFEETGLRLSGVT 72 (161)
T ss_dssp CEEEECCCCCTTT-CSBBCCCCBCCTT-SCHHHHHHHHHHHHHCCEESCCE
T ss_pred EEEEEEccCCCCC-CCEEccceecCCC-CCHHHHHHHHHHHhhCcEecCCc
Confidence 3888876644333 3489999999997 69999999999999999986433
No 41
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.26 E-value=1.5e-11 Score=104.46 Aligned_cols=44 Identities=30% Similarity=0.375 Sum_probs=39.0
Q ss_pred EEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCccc
Q 025584 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLK 207 (250)
Q Consensus 160 ~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~ 207 (250)
++||++|.|.+ ..|++|||.+|.| |++++||+||++||||+++.
T Consensus 55 ~vLLv~r~~~~---g~W~lPgG~ve~g-Et~~eaa~REl~EEtGl~~~ 98 (194)
T 2fvv_A 55 EVLLVSSSRHP---DRWIVPGGGMEPE-EEPSVAAVREVCEEAGVKGT 98 (194)
T ss_dssp EEEEEECSSCT---TSEECSEEECCTT-CCHHHHHHHHHHHHHCEEEE
T ss_pred EEEEEEEeCCC---CcEECCCCcCCCC-cCHHHHHHHHHHHHhCCccc
Confidence 59999887754 3699999999997 69999999999999999975
No 42
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.25 E-value=1.3e-11 Score=97.27 Aligned_cols=57 Identities=19% Similarity=0.275 Sum_probs=43.3
Q ss_pred EEEEEEEEcCC-CceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCccccc
Q 025584 146 AVAVLILLDSE-GETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLE 209 (250)
Q Consensus 146 aV~VL~il~~~-~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~ 209 (250)
+|++++ ++.+ + +++|+++.+. ...|++|||.+|.| |++.+||+||++||||+.+...
T Consensus 11 ~v~~~i-~~~~~~--~vLl~~r~~~---~g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~~~ 68 (150)
T 2o1c_A 11 SILVVI-YAQDTK--RVLMLQRRDD---PDFWQSVTGSVEEG-ETAPQAAMREVKEEVTIDVVAE 68 (150)
T ss_dssp EEEEEE-EETTTC--EEEEEECSSS---TTCEESEEEECCTT-CCHHHHHHHHHHHHHCCCHHHH
T ss_pred EEEEEE-EeCCCC--EEEEEEecCC---CCceECCccccCCC-CCHHHHHHHHHHHHhCCCcccc
Confidence 555554 3543 4 3777766443 34799999999997 6999999999999999998643
No 43
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.25 E-value=4.1e-11 Score=96.84 Aligned_cols=47 Identities=28% Similarity=0.314 Sum_probs=37.4
Q ss_pred ceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccc
Q 025584 158 ETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKL 208 (250)
Q Consensus 158 ~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~ 208 (250)
+..+||+++. . +...|++|||++|.| |++.+||+||++||||+++..
T Consensus 23 ~~e~LL~~r~-~--~~~~W~lPgG~ve~g-Et~~~aa~REl~EEtGl~~~~ 69 (155)
T 3u53_A 23 AIEFLLLQAS-D--GIHHWTPPKGHVEPG-EDDLETALRETQEEAGIEAGQ 69 (155)
T ss_dssp SEEEEEEEES-S--SSCCEECSEEECCSS-CCHHHHHHHHHHHHHCCCGGG
T ss_pred CcEEEEEEec-C--CCCCEECCeeeccCC-CCHHHHHHHHHHHHHCCcccc
Confidence 3457776542 2 234699999999997 699999999999999999753
No 44
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.25 E-value=2.6e-11 Score=98.04 Aligned_cols=54 Identities=20% Similarity=0.287 Sum_probs=42.2
Q ss_pred EEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccc
Q 025584 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKL 208 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~ 208 (250)
+|++++ ++ ++ ++||+++.+ ...|++|||.+|.| |++++||+||++||||+++..
T Consensus 8 ~v~~vi-~~-~~--~vLL~~r~~----~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~ 61 (159)
T 3f6a_A 8 TVSVFI-VC-KD--KVLLHLHKK----AKKMLPLGGHIEVN-ELPEEACIREAKEEAGLNVTL 61 (159)
T ss_dssp EEEEEE-EE-TT--EEEEEECSS----SCCEECEEEECCTT-CCHHHHHHHHHHHHHCCCCEE
T ss_pred EEEEEE-EE-CC--EEEEEEcCC----CCeEECCccCccCC-CCHHHHHHHHHHHHhCCCcee
Confidence 444443 34 45 488888754 34699999999997 699999999999999999753
No 45
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.25 E-value=1.9e-11 Score=95.80 Aligned_cols=51 Identities=24% Similarity=0.401 Sum_probs=42.9
Q ss_pred cCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCccc
Q 025584 154 DSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLK 207 (250)
Q Consensus 154 ~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~ 207 (250)
+.+++ ++|+++.+.+.....|++|+|.++.| |++++||+||+.||||+.+.
T Consensus 17 ~~~~~--vLl~~r~~~~~~~g~w~lPgG~ve~g-E~~~~aa~RE~~EE~Gl~~~ 67 (140)
T 2rrk_A 17 ERDGK--ILLAQRPAQSDQAGLWEFAGGKVEPD-ESQRQALVRELREELGIEAT 67 (140)
T ss_dssp EETTE--EEEEECCSSCSCCCCEECCEEECCTT-SCHHHHHHHHHHHHSCEEEE
T ss_pred EcCCE--EEEEEcCCCCCCCCEEECCceecCCC-CCHHHHHHHHHHHHHCCeee
Confidence 44554 88888766655566899999999997 69999999999999999975
No 46
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.23 E-value=2.5e-11 Score=95.93 Aligned_cols=84 Identities=18% Similarity=0.179 Sum_probs=53.7
Q ss_pred CEEEEEEEEcC-CCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCC
Q 025584 145 PAVAVLILLDS-EGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTG 223 (250)
Q Consensus 145 ~aV~VL~il~~-~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~~ 223 (250)
.+|+++++ +. ++ ++||+++ . . ..|++|||.+|.| |++++||+||+.||||+.+.. +..++.+-
T Consensus 19 ~~~~~vi~-~~~~~--~vLl~~r--~-~--g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~~--~~~~~~~~----- 82 (148)
T 2azw_A 19 YAAYIIVS-KPENN--TMVLVQA--P-N--GAYFLPGGEIEGT-ETKEEAIHREVLEELGISVEI--GCYLGEAD----- 82 (148)
T ss_dssp CEEEEECE-EGGGT--EEEEEEC--T-T--SCEECSEEECCTT-CCHHHHHHHHHHHHHSEEEEE--EEEEEEEE-----
T ss_pred eEEEEEEE-CCCCC--eEEEEEc--C-C--CCEeCCCcccCCC-CCHHHHHHHHHHHHhCCeeEe--eeEEEEEE-----
Confidence 45555443 43 44 3777764 2 2 4799999999997 699999999999999999853 23332110
Q ss_pred ceeecCCcc--ccceEEEEEEEc
Q 025584 224 CKFFPSAVC--SFFLHSFFLFLS 244 (250)
Q Consensus 224 ~~~~pspG~--~dE~i~lFl~~~ 244 (250)
...++..+. ....+++|.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~ 105 (148)
T 2azw_A 83 EYFYSNHRQTAYYNPGYFYVANT 105 (148)
T ss_dssp EEEEETTTTEEEEEEEEEEEEEE
T ss_pred EEEcCCCCCcceEEEEEEEEEEc
Confidence 113443433 345577777754
No 47
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.22 E-value=4.1e-12 Score=98.06 Aligned_cols=52 Identities=25% Similarity=0.332 Sum_probs=43.1
Q ss_pred EcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCccc
Q 025584 153 LDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLK 207 (250)
Q Consensus 153 l~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~ 207 (250)
++.+++ ++|+++.+.......|++|+|.+|.| |++.+||+||++||||+.+.
T Consensus 12 ~~~~~~--vLl~~r~~~~~~~g~w~~PgG~~e~g-E~~~~aa~RE~~EE~G~~~~ 63 (129)
T 1mut_A 12 RNENNE--IFITRRAADAHMANKLEFPGGKIEMG-ETPEQAVVRELQEEVGITPQ 63 (129)
T ss_dssp EETTTE--EEEEECSSCCSSSCCEECCCCCSSSC-SSTTHHHHHHHHTTTCCSSC
T ss_pred EecCCE--EEEEEeCCCCCCCCeEECCccCcCCC-CCHHHHHHHHHHHHhCCccc
Confidence 355554 88888766555566899999999997 69999999999999999975
No 48
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.20 E-value=6.8e-11 Score=97.15 Aligned_cols=54 Identities=20% Similarity=0.368 Sum_probs=42.6
Q ss_pred EEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCccc
Q 025584 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLK 207 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~ 207 (250)
+|++++ ++.+++ +||+++.+ ...|++|||++|.| |++++||+||+.||||+++.
T Consensus 10 ~v~~~i-~~~~~~--vLl~~r~~----~~~w~~p~G~~e~g-E~~~~aa~RE~~EE~G~~~~ 63 (164)
T 2kdv_A 10 NVGIVI-CNRQGQ--VMWARRFG----QHSWQFPQGGINPG-ESAEQAMYRELFEEVGLSRK 63 (164)
T ss_dssp EEEEEE-ECTTSE--EEEEEETT----CCCEECCEEECCTT-CCHHHHHHHHHHHHHCCCGG
T ss_pred EEEEEE-EccCCE--EEEEEEcC----CCeEECCeeecCCC-CCHHHHHHHHHHHHHCCCcc
Confidence 455554 465554 78877643 34799999999997 69999999999999999975
No 49
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.20 E-value=1.5e-11 Score=97.58 Aligned_cols=55 Identities=22% Similarity=0.366 Sum_probs=41.4
Q ss_pred EEEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCccc
Q 025584 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLK 207 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~ 207 (250)
.+++++ ++.++. ++||+++.+ ...|++|||++|.| |++++||+||+.||||+++.
T Consensus 6 ~~~~~i-~~~~~~-~vLl~~r~~----~g~w~~PgG~ve~g-Es~~~aa~RE~~EEtGl~~~ 60 (146)
T 2jvb_A 6 VRGAAI-FNENLS-KILLVQGTE----SDSWSFPRGKISKD-ENDIDCCIREVKEEIGFDLT 60 (146)
T ss_dssp CEEEEE-BCTTSS-EEEEECCSS----SSCCBCCEECCCSS-SCHHHHHHHHHHHHTSCCCS
T ss_pred EEEEEE-EeCCCC-EEEEEEEcC----CCcEECCcccCCCC-CCHHHHHHHHHHHHHCCCch
Confidence 344443 354422 488877532 34799999999997 69999999999999999874
No 50
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.20 E-value=5.1e-11 Score=95.45 Aligned_cols=45 Identities=20% Similarity=0.282 Sum_probs=37.7
Q ss_pred EEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccce
Q 025584 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDM 211 (250)
Q Consensus 160 ~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L 211 (250)
++||+++ ...|++|||++|.| |++++||+||++||||+++...++
T Consensus 31 ~vLl~~r------~~~w~lPgG~ve~g-E~~~~aa~REl~EEtGl~~~~~~~ 75 (154)
T 2pqv_A 31 KLLVTKD------KGKYYTIGGAIQVN-ESTEDAVVREVKEELGVKAQAGQL 75 (154)
T ss_dssp EEEEEEE------TTEEECEEEECBTT-CCHHHHHHHHHHHHHCCCEEEEEE
T ss_pred EEEEEec------CCeEECcccCcCCC-CCHHHHHHHHHHHHhCCeeeeceE
Confidence 3777776 34799999999997 699999999999999999864443
No 51
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.20 E-value=5.5e-11 Score=99.28 Aligned_cols=58 Identities=12% Similarity=0.186 Sum_probs=43.4
Q ss_pred EEEEEEEEcCCCceEEEEEEeeec-CCCCcEEEe-cceecCCCCCCHHHHHHHHHHHHhCCccc
Q 025584 146 AVAVLILLDSEGETYAILTEQVRV-PTGRVILEL-PAGMLDDDKGDFVGTAVREVEEETGIQLK 207 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~-p~~~~~~El-PAG~vD~geEt~~~AA~REL~EETGl~i~ 207 (250)
+|++++ ++.+++ ++|+++... ......|++ |||.+|.| |++++||+||++||||+++.
T Consensus 34 ~v~~~i-~~~~g~--vLl~~R~~~~~~~~g~w~~~PgG~ve~g-Et~~~aa~REl~EEtGl~~~ 93 (190)
T 1hzt_A 34 AFSSWL-FNAKGQ--LLVTRRALSKKAWPGVWTNSVCGHPQLG-ESNEDAVIRRCRYELGVEIT 93 (190)
T ss_dssp CEEEEE-ECTTCC--EEEEEECTTCSSSTTCEEESEEECCCTT-CCHHHHHHHHHHHHHCCCBS
T ss_pred EEEEEE-EcCCCE--EEEEEeCCCCCCCCCcccCcccccCCCC-CCHHHHHHHHHHHHHCCCch
Confidence 455554 466665 777665322 122458999 99999997 69999999999999999985
No 52
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.20 E-value=8.4e-11 Score=94.09 Aligned_cols=34 Identities=29% Similarity=0.649 Sum_probs=30.6
Q ss_pred EEecceecCCCCCCHHHHHHHHHHHHhCCcccccc
Q 025584 176 LELPAGMLDDDKGDFVGTAVREVEEETGIQLKLED 210 (250)
Q Consensus 176 ~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~ 210 (250)
|++|||.+|+| |++++||+||+.||||+++....
T Consensus 38 w~lPgG~ve~g-E~~~~aa~RE~~EEtGl~~~~~~ 71 (155)
T 2b06_A 38 YAFPGGHVEND-EAFAESVIREIYEETGLTIQNPQ 71 (155)
T ss_dssp EECCCCBCCTT-SCHHHHHHHHHHHHHSEEEESCE
T ss_pred EeccceecCCC-CCHHHHHHHHHHHHhCccccCCc
Confidence 89999999997 69999999999999999986433
No 53
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.19 E-value=4.7e-11 Score=98.70 Aligned_cols=68 Identities=21% Similarity=0.312 Sum_probs=47.2
Q ss_pred EcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCcc
Q 025584 153 LDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAVC 232 (250)
Q Consensus 153 l~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~~~~~~pspG~ 232 (250)
++.+++ +||+++. ...|++|||++|.| |++++||+||++||||+++. .+..+. .|..+.
T Consensus 23 i~~~~~--vLL~~r~-----~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~--~~~~l~----------~~~~~~- 81 (163)
T 3f13_A 23 IEMPDG--VLVTASR-----GGRYNLPGGKANRG-ELRSQALIREIREETGLRIN--SMLYLF----------DHITPF- 81 (163)
T ss_dssp CEETTE--EEEEECC--------BBCSEEECCTT-CCHHHHHHHHHHHHHCCCCC--EEEEEE----------EEECSS-
T ss_pred EEeCCE--EEEEEEC-----CCeEECCceeCCCC-CCHHHHHHHHHHHHHCcccc--eeEEEE----------EEecCC-
Confidence 344554 7777653 24799999999997 69999999999999999975 333342 344443
Q ss_pred ccceEEEEEEE
Q 025584 233 SFFLHSFFLFL 243 (250)
Q Consensus 233 ~dE~i~lFl~~ 243 (250)
...++|++.
T Consensus 82 --~~~~~f~~~ 90 (163)
T 3f13_A 82 --NAHKVYLCI 90 (163)
T ss_dssp --EEEEEEEEE
T ss_pred --eEEEEEEEE
Confidence 556667764
No 54
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.17 E-value=7.3e-11 Score=99.29 Aligned_cols=47 Identities=30% Similarity=0.407 Sum_probs=38.5
Q ss_pred EEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccce
Q 025584 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDM 211 (250)
Q Consensus 160 ~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L 211 (250)
++||+++.+ ...|++|||.+|+| |++++||+||++||||+++...++
T Consensus 16 ~vLL~~r~~----~g~W~lPGG~ve~g-Es~~~aa~REl~EEtGl~~~~~~~ 62 (188)
T 3fk9_A 16 QVLLLQKPR----RGWWVAPGGKMEAG-ESILETVKREYWEETGITVKNPEL 62 (188)
T ss_dssp EEEEEECTT----TCCEECCEEECCTT-CCHHHHHHHHHHHHHSCEESSCEE
T ss_pred EEEEEEeCC----CCeEECCeecccCC-CCHHHHHHHHHHHHHCCCCCCceE
Confidence 388887532 34799999999997 699999999999999999864444
No 55
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.16 E-value=7.9e-11 Score=100.35 Aligned_cols=46 Identities=24% Similarity=0.208 Sum_probs=37.3
Q ss_pred EEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccc
Q 025584 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLED 210 (250)
Q Consensus 160 ~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~ 210 (250)
++||+++.. ...|++|||.+|.| |++.+||+||++||||+++....
T Consensus 80 ~vLLv~r~~----~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~v~~~~ 125 (205)
T 3q1p_A 80 KLLFVKEKS----DGKWALPGGWADVG-YTPTEVAAKEVFEETGYEVDHFK 125 (205)
T ss_dssp EEEEEEC-------CCEECSEEECCTT-CCHHHHHHHHHHHHHSEEEEEEE
T ss_pred EEEEEEEcC----CCcEECCcCccCCC-CCHHHHHHHHHHHHHCCccccce
Confidence 488888652 33799999999997 69999999999999999986433
No 56
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.15 E-value=2.3e-10 Score=102.24 Aligned_cols=56 Identities=25% Similarity=0.434 Sum_probs=45.8
Q ss_pred ceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeecc
Q 025584 158 ETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLT 215 (250)
Q Consensus 158 ~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~ 215 (250)
+.+|||+++.+.|. ...|++|||.+|.| |++++||+||++||||+++....+..+.
T Consensus 55 ~~~VLLv~R~~~p~-~g~W~lPGG~ve~g-Es~~~AA~REl~EEtGl~v~~~~l~~l~ 110 (273)
T 2fml_A 55 QLKVLLIQRKGHPF-RNSWALPGGFVNRN-ESTEDSVLRETKEETGVVISQENIEQLH 110 (273)
T ss_dssp EEEEEEEEECSSSS-TTCEECCEEECCTT-SCHHHHHHHHHHHHHCCCCCGGGEEEEE
T ss_pred CcEEEEEEccCCCC-CCcEECCccCCCCC-cCHHHHHHHHHHHHHCCCCCcCcEEEEE
Confidence 34688998877653 45899999999997 6999999999999999887656666664
No 57
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.13 E-value=1.3e-10 Score=104.22 Aligned_cols=74 Identities=22% Similarity=0.319 Sum_probs=53.2
Q ss_pred EEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCc
Q 025584 152 LLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAV 231 (250)
Q Consensus 152 il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L~~l~~~~~~~~~~pspG 231 (250)
++..++ ++||+++.+.+ ...|++|||.+|.| |++++||+||++||||+++. .+..++. ..++.+
T Consensus 146 ~v~~~~--~vLL~rr~~~~--~g~w~lPgG~vE~G-Et~eeAa~REv~EEtGl~v~--~~~~~~~--------~~~~~~- 209 (269)
T 1vk6_A 146 AIRRDD--SILLAQHTRHR--NGVHTVLAGFVEVG-ETLEQAVAREVMEESGIKVK--NLRYVTS--------QPWPFP- 209 (269)
T ss_dssp EEEETT--EEEEEEETTTC--SSCCBCEEEECCTT-CCHHHHHHHHHHHHHCCEEE--EEEEEEE--------EEEETT-
T ss_pred EEEeCC--EEEEEEecCCC--CCcEECCcCcCCCC-CCHHHHHHHHHHHHhCceee--eEEEEEE--------EecCCC-
Confidence 344455 49999987765 34799999999997 69999999999999999985 4444532 123333
Q ss_pred cccceEEEEEEE
Q 025584 232 CSFFLHSFFLFL 243 (250)
Q Consensus 232 ~~dE~i~lFl~~ 243 (250)
+..+.+|++.
T Consensus 210 --~~~~~~f~a~ 219 (269)
T 1vk6_A 210 --QSLMTAFMAE 219 (269)
T ss_dssp --EEEEEEEEEE
T ss_pred --CEEEEEEEEE
Confidence 3456667765
No 58
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.13 E-value=1.5e-10 Score=105.02 Aligned_cols=47 Identities=30% Similarity=0.508 Sum_probs=40.4
Q ss_pred EEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccc
Q 025584 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKL 208 (250)
Q Consensus 160 ~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~ 208 (250)
++||+++.+.+ +...|++|||.+|+| |++++||+||++||||+++..
T Consensus 220 ~vLL~~r~~~~-~~g~w~lPgG~ve~g-Et~~~aa~REl~EEtGl~v~~ 266 (352)
T 2qjt_B 220 HILMVQRKAHP-GKDLWALPGGFLECD-ETIAQAIIRELFEETNINLTH 266 (352)
T ss_dssp EEEEEEESSSS-STTCEECSEEECCTT-SCHHHHHHHHHHHHHCCSCCH
T ss_pred EEEEEEEcCCC-CCCeEECCCCcCCCC-CCHHHHHHHHHHHhhCCCccc
Confidence 48888887654 456899999999997 699999999999999999863
No 59
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.12 E-value=2.1e-10 Score=99.69 Aligned_cols=52 Identities=21% Similarity=0.190 Sum_probs=42.3
Q ss_pred eEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccceeec
Q 025584 159 TYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDL 214 (250)
Q Consensus 159 ~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~L~~L 214 (250)
.++||+++.+.+ ....|++|||++|.| |++++||+||++||||+++. .+..+
T Consensus 28 ~~vLLv~r~~~~-~~g~w~lPGG~ve~g-Es~~~Aa~REl~EEtGl~~~--~~~~l 79 (226)
T 2fb1_A 28 ISLLLLKRNFEP-AMGEWSLMGGFVQKD-ESVDDAAKRVLAELTGLENV--YMEQV 79 (226)
T ss_dssp EEEEEEECSSSS-STTCEECEEEECCTT-SCHHHHHHHHHHHHHCCCSC--EEEEE
T ss_pred CEEEEEECcCCC-CCCCEECCeeccCCC-CCHHHHHHHHHHHHHCCCCC--ceEEE
Confidence 468888887644 345799999999997 69999999999999999974 44445
No 60
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.12 E-value=6.9e-11 Score=102.67 Aligned_cols=40 Identities=23% Similarity=0.251 Sum_probs=33.7
Q ss_pred cEEEecceecCCCCC-CHHHHHHHHHHHHhCCcccccceeec
Q 025584 174 VILELPAGMLDDDKG-DFVGTAVREVEEETGIQLKLEDMIDL 214 (250)
Q Consensus 174 ~~~ElPAG~vD~geE-t~~~AA~REL~EETGl~i~~~~L~~L 214 (250)
..|++|||.+|.| | ++++||+||++||||+++....+..+
T Consensus 75 g~w~lPGG~ve~g-E~t~~eaa~REl~EEtGl~~~~~~l~~l 115 (217)
T 2xsq_A 75 GRLGFPGGFVDTQ-DRSLEDGLNRELREELGEAAAAFRVERT 115 (217)
T ss_dssp SCEECSEEECCTT-CSSHHHHHHHHHHHHHCGGGGGCCCCGG
T ss_pred CeEECCceecCCC-CCCHHHHHHHHHHHHHCCCCccceeEEE
Confidence 4799999999997 7 99999999999999999864344444
No 61
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.12 E-value=1.2e-10 Score=99.38 Aligned_cols=45 Identities=27% Similarity=0.451 Sum_probs=38.0
Q ss_pred EEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccc
Q 025584 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLED 210 (250)
Q Consensus 160 ~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~ 210 (250)
++||+++. ...|++|||.+|.| |++.+||+||++||||+++....
T Consensus 82 ~vLLvrr~-----~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~ 126 (206)
T 3o8s_A 82 KILLVQEN-----DGLWSLPGGWCDVD-QSVKDNVVKEVKEEAGLDVEAQR 126 (206)
T ss_dssp EEEEEECT-----TSCEECSEEECCTT-SCHHHHHHHHHHHHHCEEEEEEE
T ss_pred EEEEEEec-----CCeEECCeeccCCC-CCHHHHHHHHHHHHHCCcceeee
Confidence 48888764 44799999999997 69999999999999999985333
No 62
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.11 E-value=1.8e-10 Score=103.77 Aligned_cols=50 Identities=26% Similarity=0.552 Sum_probs=41.4
Q ss_pred CCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccc
Q 025584 155 SEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKL 208 (250)
Q Consensus 155 ~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~ 208 (250)
.++ ++||+++.+.+ +...|++|||.+|.| |++++||+||++||||+++..
T Consensus 212 ~~~--~vLL~~r~~~~-~~g~w~lPgG~ve~g-E~~~~aa~REl~EEtGl~~~~ 261 (341)
T 2qjo_A 212 QAG--HVLMVRRQAKP-GLGLIALPGGFIKQN-ETLVEGMLRELKEETRLKVPL 261 (341)
T ss_dssp ETT--EEEEEECCSSS-STTCEECSEEECCTT-SCHHHHHHHHHHHHHCCSSCH
T ss_pred eCC--EEEEEEecCCC-CCCeEECCCCcCCCC-CCHHHHHHHHHhhhhCCcccc
Confidence 445 48888886643 355799999999997 699999999999999999863
No 63
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.07 E-value=2.3e-10 Score=96.27 Aligned_cols=52 Identities=19% Similarity=0.323 Sum_probs=40.4
Q ss_pred EEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCc
Q 025584 147 VAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQ 205 (250)
Q Consensus 147 V~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~ 205 (250)
|++++ ++.++. ++||+++.+ ...|++|||++|.| |++++||+||++||||++
T Consensus 48 ~~~vv-~~~~~~-~vLL~~r~~----~g~w~lPgG~ve~g-Es~~eaa~REl~EEtGl~ 99 (197)
T 3fcm_A 48 SSAFA-VNKERN-KFLMIHHNI----YNSWAWTGGHSDNE-KDQLKVAIKELKEETGVK 99 (197)
T ss_dssp EEEEE-ECTTSC-EEEEEEETT----TTEEECEEEECTTC-CBHHHHHHHHHHHHHCCS
T ss_pred EEEEE-EECCCC-EEEEEEecC----CCCEECCccccCCC-CCHHHHHHHHHHHHHCCC
Confidence 33443 465543 588887642 23899999999987 699999999999999998
No 64
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.06 E-value=5.4e-10 Score=98.01 Aligned_cols=55 Identities=22% Similarity=0.346 Sum_probs=43.1
Q ss_pred CceEEEEEEeeecCCCCcEEEecceecCC--CCCCHHHHHHHHHHHHhCCcccccceeecc
Q 025584 157 GETYAILTEQVRVPTGRVILELPAGMLDD--DKGDFVGTAVREVEEETGIQLKLEDMIDLT 215 (250)
Q Consensus 157 ~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~--geEt~~~AA~REL~EETGl~i~~~~L~~L~ 215 (250)
++.++||+++.+.+ ....|++|||++|. | |++++||+||++||||+++. .+..+.
T Consensus 35 ~~~~vLLv~R~~~~-~~g~W~lPGG~ve~~~g-Es~~~AA~REl~EEtGl~~~--~~~~l~ 91 (240)
T 3gz5_A 35 QQLKVLLVQRSNHP-FLGLWGLPGGFIDETCD-ESLEQTVLRKLAEKTAVVPP--YIEQLC 91 (240)
T ss_dssp TEEEEEEEECCSSS-STTCEECSEEECCTTTC-SBHHHHHHHHHHHHHSSCCS--EEEEEE
T ss_pred CCcEEEEEECcCCC-CCCCEECCccccCCCCC-cCHHHHHHHHHHHHHCCCCC--ceeeEE
Confidence 33468888876544 34579999999998 7 69999999999999999874 444453
No 65
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.05 E-value=1.4e-10 Score=93.68 Aligned_cols=46 Identities=28% Similarity=0.469 Sum_probs=37.9
Q ss_pred CCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccc
Q 025584 156 EGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKL 208 (250)
Q Consensus 156 ~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~ 208 (250)
+++ +||+++.+ ...|++|||.+|+| |++++||+||++||||+++..
T Consensus 11 ~~~--vLL~~r~~----~g~W~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~ 56 (156)
T 1k2e_A 11 NGK--VLLVKHKR----LGVYIYPGGHVEHN-ETPIEAVKREFEEETGIVVEP 56 (156)
T ss_dssp TTE--EEEEECTT----TCSEECSEEECCTT-CCHHHHHHHHHHHHHSEEEEE
T ss_pred CCE--EEEEEEcC----CCcEECCeeecCCC-CCHHHHHHHHHHHHHCCccee
Confidence 554 77777543 23699999999997 699999999999999999853
No 66
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.00 E-value=7.6e-10 Score=88.97 Aligned_cols=47 Identities=11% Similarity=0.160 Sum_probs=38.3
Q ss_pred EEEEEEeeecCCCCcEEEecceecCCCCCCHH-HHHHHHHHHHhC-Cccc
Q 025584 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFV-GTAVREVEEETG-IQLK 207 (250)
Q Consensus 160 ~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~-~AA~REL~EETG-l~i~ 207 (250)
+++|+++.........|+||+|.+|.| |+++ +||+||+.|||| +.+.
T Consensus 35 ~vLl~~R~~~~~~~g~w~~PgG~~e~g-E~~~~~a~~REl~EE~g~l~~~ 83 (155)
T 1x51_A 35 QILLVQRPNSGLLAGLWEFPSVTWEPS-EQLQRKALLQELQRWAGPLPAT 83 (155)
T ss_dssp EEEEEECCCCSTTCSCEECCEEECCSS-HHHHHHHHHHHHHHHSCCCCST
T ss_pred EEEEEECCCCCCCCceecCCccccCCC-CCHHHHHHHHHHHHHhCCccee
Confidence 588887655444456899999999997 6996 999999999999 7764
No 67
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=98.99 E-value=1.1e-09 Score=100.87 Aligned_cols=48 Identities=27% Similarity=0.338 Sum_probs=39.4
Q ss_pred ceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccccc
Q 025584 158 ETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLED 210 (250)
Q Consensus 158 ~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~~~ 210 (250)
+.+|||+++.+ ...|++|||++|+| |++++||+||++||||+++....
T Consensus 37 ~~~vLLv~r~~----~g~W~lPgG~ve~g-Es~~~AA~REl~EEtGl~~~~~~ 84 (364)
T 3fjy_A 37 SIEVCIVHRPK----YDDWSWPKGKLEQN-ETHRHAAVREIGEETGSPVKLGP 84 (364)
T ss_dssp TEEEEEEEETT----TTEEECCEEECCTT-CCHHHHHHHHHHHHHSCCEEEEE
T ss_pred ceEEEEEEcCC----CCCEECCcCCCCCC-CCHHHHHHHHHHHHhCCeeeecc
Confidence 34688887733 25799999999997 69999999999999999985433
No 68
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=98.82 E-value=2.8e-09 Score=92.83 Aligned_cols=51 Identities=20% Similarity=0.326 Sum_probs=34.7
Q ss_pred cCCCceEEEEEEeeecCC---CCcEEEe-cceecCCCCCC------HHHHHHHHHHHHhCCccc
Q 025584 154 DSEGETYAILTEQVRVPT---GRVILEL-PAGMLDDDKGD------FVGTAVREVEEETGIQLK 207 (250)
Q Consensus 154 ~~~~~~~VlLvrQ~R~p~---~~~~~El-PAG~vD~geEt------~~~AA~REL~EETGl~i~ 207 (250)
..+++ +||+++...+. -...|++ |||++|+| |+ +++||+||++||||+++.
T Consensus 76 ~~~gr--vLl~~R~~~~~e~~~~g~w~~gPGGhVE~G-Es~~p~EtleeAa~REl~EEtGl~v~ 136 (211)
T 3e57_A 76 MDGDR--VLITKRTTKQSEKRLHNLYSLGIGGHVREG-DGATPREAFLKGLEREVNEEVDVSLR 136 (211)
T ss_dssp EETTE--EEEEEC------------CBSSEECCCBGG-GCSSHHHHHHHHHHHHHHHHEEEEEE
T ss_pred EECCE--EEEEEECCCCCcccccCCcccccceEEeCC-CCCCchhhHHHHHHHHHHHHhCCeee
Confidence 44554 77776544331 1246888 99999998 57 499999999999999875
No 69
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=98.73 E-value=5.1e-08 Score=85.46 Aligned_cols=88 Identities=19% Similarity=0.186 Sum_probs=54.9
Q ss_pred EEEEEEEEcCCCceEEEEEEeeecCC---CCcEEEecc-eecCCCC-----CC---HHHHHHHHHHHHhCCcccc---cc
Q 025584 146 AVAVLILLDSEGETYAILTEQVRVPT---GRVILELPA-GMLDDDK-----GD---FVGTAVREVEEETGIQLKL---ED 210 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~p~---~~~~~ElPA-G~vD~ge-----Et---~~~AA~REL~EETGl~i~~---~~ 210 (250)
+|+|++ ++.+++ ++|.+ |... ....|++|+ |+++.|+ |+ +++||+||++||||+.+.. .+
T Consensus 61 av~v~v-~~~~g~--lLLq~--R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~ 135 (235)
T 2dho_A 61 AFSVFL-FNTENK--LLLQQ--RSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEE 135 (235)
T ss_dssp EEEEEE-ECTTCC--EEEEE--ECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGG
T ss_pred EEEEEE-EcCCCE--EEEEE--ecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhh
Confidence 455554 466665 66644 4332 334899995 9999872 46 5999999999999998641 24
Q ss_pred eeeccccccCCCCceeecCC-c-cccceEEEEEEEc
Q 025584 211 MIDLTAFLYPSTGCKFFPSA-V-CSFFLHSFFLFLS 244 (250)
Q Consensus 211 L~~L~~l~~~~~~~~~~psp-G-~~dE~i~lFl~~~ 244 (250)
+..++.+. ..+++. + ..++.+++|++..
T Consensus 136 l~~l~~~~------y~~~~~~~~~~~e~~~vf~~~~ 165 (235)
T 2dho_A 136 INYLTRIH------YKAQSDGIWGEHEIDYILLVRM 165 (235)
T ss_dssp SEEEEEEE------EEEECSSSBEEEEEEEEEEEEC
T ss_pred cEEEEEEE------EeccCCCccceeEEEEEEEEEE
Confidence 55554321 112222 2 2456778888763
No 70
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=98.67 E-value=4.3e-08 Score=86.63 Aligned_cols=88 Identities=17% Similarity=0.176 Sum_probs=54.6
Q ss_pred EEEEEEEEcCCCceEEEEEEeeecCC---CCcEEEecc-eecCCC-----CCCH---HHHHHHHHHHHhCCcccc---cc
Q 025584 146 AVAVLILLDSEGETYAILTEQVRVPT---GRVILELPA-GMLDDD-----KGDF---VGTAVREVEEETGIQLKL---ED 210 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~p~---~~~~~ElPA-G~vD~g-----eEt~---~~AA~REL~EETGl~i~~---~~ 210 (250)
+|.|++ ++.+++ ++|.+ |... ....|++|+ |+++.| +|++ ++||+||++||||+.+.. .+
T Consensus 72 av~v~v-~~~~g~--lLLqr--Rs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~ 146 (246)
T 2pny_A 72 AFSVVL-FNTKNR--ILIQQ--RSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPED 146 (246)
T ss_dssp EEEEEE-ECTTCC--EEEEE--ECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGG
T ss_pred EEEEEE-EeCCCE--EEEEE--ecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCccc
Confidence 455554 476665 66654 4332 334799995 999986 1476 999999999999998641 24
Q ss_pred eeeccccccCCCCceeecCC-c-cccceEEEEEEEc
Q 025584 211 MIDLTAFLYPSTGCKFFPSA-V-CSFFLHSFFLFLS 244 (250)
Q Consensus 211 L~~L~~l~~~~~~~~~~psp-G-~~dE~i~lFl~~~ 244 (250)
+..++.+. ..+++. + ..+|.+++|++..
T Consensus 147 l~~l~~~~------y~~~~~~~~~~~e~~~vf~~~~ 176 (246)
T 2pny_A 147 IVFMTIYH------HKAKSDRIWGEHEICYLLLVRK 176 (246)
T ss_dssp SEEEEEEE------EEEESSSSBEEEEEEEEEEEEC
T ss_pred cEEEEEEE------EEecCCCceeeeEEEEEEEEEE
Confidence 55554321 112222 2 2366778888763
No 71
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.61 E-value=1.8e-08 Score=88.73 Aligned_cols=62 Identities=21% Similarity=0.351 Sum_probs=42.8
Q ss_pred EEEEEEEEcCCCc-eEEEEEEeeecCC-CCcEEEecceecCCCCCC-------------------HHHHHHHHHHHHhCC
Q 025584 146 AVAVLILLDSEGE-TYAILTEQVRVPT-GRVILELPAGMLDDDKGD-------------------FVGTAVREVEEETGI 204 (250)
Q Consensus 146 aV~VL~il~~~~~-~~VlLvrQ~R~p~-~~~~~ElPAG~vD~geEt-------------------~~~AA~REL~EETGl 204 (250)
+++++++.+..++ .+|+|+++..... ....|.||||.+|++|.+ +..||+||+.||||+
T Consensus 10 aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE~Gl 89 (232)
T 3qsj_A 10 AATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEEIGW 89 (232)
T ss_dssp EEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHHHSC
T ss_pred eEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHHhCc
Confidence 4444444443222 4688877654332 245899999999997533 589999999999999
Q ss_pred ccc
Q 025584 205 QLK 207 (250)
Q Consensus 205 ~i~ 207 (250)
.+.
T Consensus 90 ~l~ 92 (232)
T 3qsj_A 90 LLA 92 (232)
T ss_dssp CCS
T ss_pred eec
Confidence 874
No 72
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=98.61 E-value=1.3e-07 Score=86.40 Aligned_cols=91 Identities=13% Similarity=0.047 Sum_probs=56.5
Q ss_pred EEEEEEEEcCCCceEEEEEEeeec-CCCCcEE-EecceecCCCCCCHHHHHHHHHHHHhCCcccc-cceeeccccccCCC
Q 025584 146 AVAVLILLDSEGETYAILTEQVRV-PTGRVIL-ELPAGMLDDDKGDFVGTAVREVEEETGIQLKL-EDMIDLTAFLYPST 222 (250)
Q Consensus 146 aV~VL~il~~~~~~~VlLvrQ~R~-p~~~~~~-ElPAG~vD~geEt~~~AA~REL~EETGl~i~~-~~L~~L~~l~~~~~ 222 (250)
+|.|.++...+++.+++|.++-.. .....+| .+|||++++| |++++||+||++||+|+.... ..+..++.+
T Consensus 120 ~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~G-Es~~eaA~REl~EElGI~~~~~~~l~~~g~i----- 193 (300)
T 3dup_A 120 GVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPAD-LSLRQNLIKECAEEADLPEALARQAIPVGAI----- 193 (300)
T ss_dssp EEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTT-SCHHHHHHHHHHHHHCCCHHHHTTCEEEEEE-----
T ss_pred EEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCC-CCHHHHHHHHHHHHhCCChhhhhhccccceE-----
Confidence 566665543332324555544211 2234578 6999999997 699999999999999998642 123333221
Q ss_pred Cceeec-CCccccceEEEEEEE
Q 025584 223 GCKFFP-SAVCSFFLHSFFLFL 243 (250)
Q Consensus 223 ~~~~~p-spG~~dE~i~lFl~~ 243 (250)
...+. .+|...|.+++|.+.
T Consensus 194 -~y~~~~~~G~~~E~~~vy~~~ 214 (300)
T 3dup_A 194 -TYCMESPAGIKPDTLFLYDLA 214 (300)
T ss_dssp -EEEEEETTEEEEEEEEEEEEE
T ss_pred -EEEEecCCCeEEEEEEEEEEE
Confidence 11232 456778888888664
No 73
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=98.61 E-value=5.7e-08 Score=90.22 Aligned_cols=54 Identities=24% Similarity=0.316 Sum_probs=42.2
Q ss_pred EEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcccc
Q 025584 151 ILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKL 208 (250)
Q Consensus 151 ~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i~~ 208 (250)
++.+.+++ ++|+++.........|+||+|.+|.| ++++|+.||++||||+++..
T Consensus 246 vi~~~~g~--vLL~rR~~~g~~~GlWefPGG~ve~g--t~~~al~REl~EE~Gl~v~~ 299 (369)
T 3fsp_A 246 VLADDEGR--VLIRKRDSTGLLANLWEFPSCETDGA--DGKEKLEQMVGEQYGLQVEL 299 (369)
T ss_dssp EEECSSSE--EEEEECCSSSTTTTCEECCEEECSSS--CTHHHHHHHHTTSSSCCEEE
T ss_pred EEEeCCCE--EEEEECCCCCCcCCcccCCCcccCCC--CcHHHHHHHHHHHhCCceee
Confidence 34456664 77777654444456899999999985 89999999999999999753
No 74
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=98.61 E-value=5.3e-08 Score=87.92 Aligned_cols=43 Identities=23% Similarity=0.230 Sum_probs=35.3
Q ss_pred eEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCCcc
Q 025584 159 TYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQL 206 (250)
Q Consensus 159 ~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl~i 206 (250)
.++||+++.. . ..|++|||++|.| |++++||+||++||||+.+
T Consensus 139 l~vLl~~r~~--~--g~W~lPGG~Ve~G-Es~~eAA~REl~EETGl~~ 181 (292)
T 1q33_A 139 LQFVAIKRKD--C--GEWAIPGGMVDPG-EKISATLKREFGEEALNSL 181 (292)
T ss_dssp EEEEEEECTT--T--CSEECCCEECCTT-CCHHHHHHHHHHHHHSCGG
T ss_pred eEEEEEEecC--C--CcEeCCCcccCCC-CCHHHHHHHHHHHHhCCcc
Confidence 3577766532 2 3799999999997 6999999999999999984
No 75
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.56 E-value=3.4e-07 Score=79.57 Aligned_cols=84 Identities=18% Similarity=0.192 Sum_probs=54.3
Q ss_pred EEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCC------cccccceeeccccccCCCCce
Q 025584 152 LLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGI------QLKLEDMIDLTAFLYPSTGCK 225 (250)
Q Consensus 152 il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl------~i~~~~L~~L~~l~~~~~~~~ 225 (250)
+++..+..+|||++. +. ..|++|||.+++| |+.++|.+|||.||+|. ++..+ ..++.+..+.....
T Consensus 66 l~~~~~~phVLLlq~---~~--~~f~LPGGkle~g-E~~~eaL~REL~EELg~~~~~~~~~eIg--e~lg~wwRp~fet~ 137 (208)
T 3bho_A 66 IVHEHRLPHVLLLQL---GT--TFFKLPGGELNPG-EDEVEGLKRLMTEILGRQDGVLQDWVID--DCIGNWWRPNFEPP 137 (208)
T ss_dssp EEEETTEEEEEEEEE---ET--TEEECSEEECCTT-CCHHHHHHHHHHHHHCCCC-----CEEE--EEEEEEEECSSSSC
T ss_pred EEcCCCCcEEEEEEc---CC--CcEECCCcccCCC-CCHHHHHHHHHHHHhCCCcCCCccEEEh--heEEEEecCCCCCc
Confidence 345555457888864 22 2799999999998 69999999999999995 22211 23444444444444
Q ss_pred eecC----CccccceEEEEEEE
Q 025584 226 FFPS----AVCSFFLHSFFLFL 243 (250)
Q Consensus 226 ~~ps----pG~~dE~i~lFl~~ 243 (250)
+||- ..--.|.+.+|+..
T Consensus 138 ~YPYlP~Hit~pKE~~kly~V~ 159 (208)
T 3bho_A 138 QYPYIPAHITKPKEHKKLFLVQ 159 (208)
T ss_dssp CBSSCCTTCCSCSEEEEEEEEE
T ss_pred CCCCCCcccCchhhheeeeeEe
Confidence 4441 12236778888764
No 76
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.43 E-value=2e-07 Score=80.73 Aligned_cols=44 Identities=23% Similarity=0.357 Sum_probs=33.2
Q ss_pred EEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHhCC-ccc
Q 025584 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGI-QLK 207 (250)
Q Consensus 160 ~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EETGl-~i~ 207 (250)
+.||+ |.|.. ..||||||.||+||+++++|..|||.||+|+ .+.
T Consensus 44 ~~iLm-Q~R~~---G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~ 88 (214)
T 3kvh_A 44 FSVLM-QMRFD---GLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLT 88 (214)
T ss_dssp EEEEE-EEETT---SCEECSEEEECTTTCCHHHHHHHSCCSCC---CCC
T ss_pred heEEE-eeeeC---CEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeee
Confidence 34444 66654 4799999999998449999999999999997 454
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.08 E-value=9.2e-06 Score=74.57 Aligned_cols=52 Identities=17% Similarity=0.342 Sum_probs=36.1
Q ss_pred EEEEEEEcCCCceEEEEEEeeecCCCCcEEEecceecCCCCCCHHHHHHHHHHHHh-CCcccccc
Q 025584 147 VAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEET-GIQLKLED 210 (250)
Q Consensus 147 V~VL~il~~~~~~~VlLvrQ~R~p~~~~~~ElPAG~vD~geEt~~~AA~REL~EET-Gl~i~~~~ 210 (250)
+.|-+++..+++ +||+ + ... |.+|||+++.+ + .++|+||+.||| |++++...
T Consensus 184 ~~vgaii~~~g~--vLL~-----~-~~G-W~LPG~~~~~~--~-~~~a~RE~~EEttGl~v~~~~ 236 (321)
T 3rh7_A 184 IRLGAVLEQQGA--VFLA-----G-NET-LSLPNCTVEGG--D-PARTLAAYLEQLTGLNVTIGF 236 (321)
T ss_dssp EEEEEEEESSSC--EEEB-----C-SSE-EBCCEEEESSS--C-HHHHHHHHHHHHHSSCEEEEE
T ss_pred ceEEEEEEECCE--EEEe-----e-CCC-ccCCcccCCCC--h-hHHHHHHHHHHhcCCEEeece
Confidence 444444555665 7777 2 244 99999987653 2 359999999997 99985433
No 78
>1t6a_A Rbstp2229 gene product; structural genomics, hypothetical protein, PSI, protein structure initiative; HET: MSE; 2.05A {Geobacillus stearothermophilus} SCOP: d.129.8.1
Probab=23.29 E-value=49 Score=26.10 Aligned_cols=38 Identities=21% Similarity=0.273 Sum_probs=30.0
Q ss_pred CeEEEeCCCCCHHhHhhhhcCchHHHHHHHhhhhcccccC
Q 025584 59 PVHVVAAPGLSESDFRCAVESTLFKQWLKNLQSETGILAN 98 (250)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~f~~W~~~l~~~~~l~~~ 98 (250)
-|.|++|++-+-.|.-|+.++..|-- ++|+.++.|++.
T Consensus 81 fIQi~LP~~AThGDKgKANEfckfLA--K~l~geL~LFNG 118 (126)
T 1t6a_A 81 FIDIALPPGATHGDKGKANEFSKWLA--KTLGGELHLFSG 118 (126)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHH--HHHCEEEECTTS
T ss_pred eEEEECCCCCCcCcchhHHHHHHHHH--HHhhhheeeecC
Confidence 38999999999999998666555544 789998877764
Done!