Query 025586
Match_columns 250
No_of_seqs 57 out of 59
Neff 3.2
Searched_HMMs 13730
Date Mon Mar 25 13:21:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025586.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025586hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bhga3 c.1.8.3 (A:329-632) be 51.3 1.8 0.00013 33.5 0.5 40 118-157 36-75 (304)
2 d1jz8a5 c.1.8.3 (A:334-625) be 50.1 3.5 0.00026 32.3 2.1 39 118-156 37-75 (292)
3 d2je8a5 c.1.8.3 (A:331-678) Fi 40.1 7.2 0.00052 30.2 2.5 35 120-155 47-84 (348)
4 d2f96a1 c.55.3.5 (A:19-220) Ri 34.9 10 0.00076 27.0 2.5 32 146-177 158-194 (202)
5 d1yq2a5 c.1.8.3 (A:313-609) be 34.0 8.1 0.00059 30.5 1.9 40 118-157 36-75 (297)
6 d1umna_ a.25.1.1 (A:) Dodecame 32.3 42 0.0031 24.1 5.7 32 103-134 38-69 (151)
7 d1o9ra_ a.25.1.1 (A:) Dodecame 29.7 48 0.0035 24.2 5.6 30 103-132 52-81 (162)
8 d2fjca1 a.25.1.1 (A:27-177) Do 25.9 55 0.004 23.3 5.3 33 103-135 43-75 (151)
9 d1d0qa_ g.41.3.2 (A:) Zinc-bin 24.8 9 0.00066 27.2 0.5 37 123-159 57-98 (102)
10 d2vzsa5 c.1.8.3 (A:336-674) Ex 23.9 13 0.00094 29.0 1.4 39 119-157 40-78 (339)
11 d1oeya_ d.15.2.2 (A:) Neutroph 23.0 23 0.0017 25.2 2.5 22 137-158 21-42 (82)
12 d2bk6a1 a.25.1.1 (A:7-156) Dod 22.5 75 0.0055 22.5 5.5 33 103-135 37-69 (150)
13 d2b3ta1 c.66.1.30 (A:2-275) N5 22.3 36 0.0027 27.8 4.0 31 142-177 2-33 (274)
14 d1n1qa_ a.25.1.1 (A:) Dodecame 21.4 70 0.0051 22.7 5.1 32 103-134 43-74 (149)
15 d1or7a2 a.177.1.1 (A:-1-111) S 21.3 34 0.0025 23.2 3.1 32 142-177 31-62 (113)
16 d2al3a1 d.15.1.2 (A:10-85) Tet 21.1 20 0.0015 25.1 1.8 29 128-156 7-37 (76)
17 d1jiga_ a.25.1.1 (A:) Dodecame 20.7 74 0.0054 22.4 5.1 30 103-132 40-69 (146)
18 d1w0ha_ c.55.3.5 (A:) Exonucle 20.6 34 0.0024 24.6 3.1 33 145-177 154-190 (200)
No 1
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.32 E-value=1.8 Score=33.54 Aligned_cols=40 Identities=15% Similarity=0.143 Sum_probs=30.0
Q ss_pred HHHHHHHhhhcccccchhccCCchHHHHHHHHHHhcCCCC
Q 025586 118 ASLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIPC 157 (250)
Q Consensus 118 ~~IE~RfqfLAADs~tvLRG~~vsYReVLl~VckkLKI~~ 157 (250)
+.++..|+.+..=++|++|-++..+-+.+++.||++||-+
T Consensus 36 ~~~~~d~~~~k~~G~N~iR~~~~~~~~~~~~~cD~~Gilv 75 (304)
T d1bhga3 36 PLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVV 75 (304)
T ss_dssp HHHHHHHHHHHHHTCCEEECTTSCCSSTHHHHHSTTCCEE
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCChHHHHHHHHhcCCee
Confidence 3455566666555589999886667788999999999865
No 2
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]}
Probab=50.06 E-value=3.5 Score=32.28 Aligned_cols=39 Identities=5% Similarity=0.097 Sum_probs=31.8
Q ss_pred HHHHHHHhhhcccccchhccCCchHHHHHHHHHHhcCCC
Q 025586 118 ASLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIP 156 (250)
Q Consensus 118 ~~IE~RfqfLAADs~tvLRG~~vsYReVLl~VckkLKI~ 156 (250)
+.++..|+.+-.=++|++|-+.....+-.++.||+++|-
T Consensus 37 ~~~~~di~l~k~~G~N~iR~~~~p~~~~~~~~~D~~Gil 75 (292)
T d1jz8a5 37 QTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLY 75 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEECTTSCCCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHhcCCCEEEecCCCChHHHHHHHhhcCCe
Confidence 445677788877779999998667778899999999975
No 3
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=40.09 E-value=7.2 Score=30.17 Aligned_cols=35 Identities=11% Similarity=0.080 Sum_probs=23.7
Q ss_pred HHHHHhhhcccccchhcc---CCchHHHHHHHHHHhcCC
Q 025586 120 LESRFLFLAADARSTLRG---WRPSYRNVLLAVRKNLNI 155 (250)
Q Consensus 120 IE~RfqfLAADs~tvLRG---~~vsYReVLl~VckkLKI 155 (250)
++..|+.+-.=++|++|- +-+. -+.+++.||++||
T Consensus 47 ~~~di~l~ke~G~N~IR~~~~~~~p-~~~f~d~cD~~Gi 84 (348)
T d2je8a5 47 YQTLFRDMKEANMNMVRIWGGGTYE-NNLFYDLADENGI 84 (348)
T ss_dssp HHHHHHHHHHTTCCEEEECTTSCCC-CHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEecCCCCCCC-CHHHHHHHHHCCC
Confidence 344555555545888883 2222 6888999999997
No 4
>d2f96a1 c.55.3.5 (A:19-220) Ribonuclease T {Pseudomonas aeruginosa [TaxId: 287]}
Probab=34.89 E-value=10 Score=26.96 Aligned_cols=32 Identities=13% Similarity=0.219 Sum_probs=25.0
Q ss_pred HHHHHHhcCCCCCCC-----CChHHHHHHHHHHHHhh
Q 025586 146 LLAVRKNLNIPCSSK-----LSTEDLEAEIFLHLLQE 177 (250)
Q Consensus 146 Ll~VckkLKI~~s~k-----lsT~dLEaEIFLhLL~~ 177 (250)
|-.+|++++|.++.. +.-...-++||.+++++
T Consensus 158 L~~~~~~~gi~~~~~~aH~Al~Da~~ta~i~~~l~~~ 194 (202)
T d2f96a1 158 LAKACQAAGMEFDNREAHSARYDTEKTAELFCGIVNR 194 (202)
T ss_dssp HHHHHHHTTCCCCTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 667899999987553 45556668999999988
No 5
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]}
Probab=34.01 E-value=8.1 Score=30.49 Aligned_cols=40 Identities=10% Similarity=0.055 Sum_probs=31.2
Q ss_pred HHHHHHHhhhcccccchhccCCchHHHHHHHHHHhcCCCC
Q 025586 118 ASLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIPC 157 (250)
Q Consensus 118 ~~IE~RfqfLAADs~tvLRG~~vsYReVLl~VckkLKI~~ 157 (250)
+.++..|+.+-.=++|++|-+....-+-+++.||++||-.
T Consensus 36 ~~~~~di~l~k~~G~N~iR~~h~p~~~~~~d~cD~~Gilv 75 (297)
T d1yq2a5 36 AGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWV 75 (297)
T ss_dssp HHHHHHHHHHHHTTCCEEEETTSCCCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHCCCCEEEccCCCChHHHHHHHHhcCCEE
Confidence 3556777777777799999865556677999999999853
No 6
>d1umna_ a.25.1.1 (A:) Dodecameric ferritin homolog {Streptococcus suis [TaxId: 1307]}
Probab=32.35 E-value=42 Score=24.05 Aligned_cols=32 Identities=19% Similarity=0.354 Sum_probs=25.6
Q ss_pred hHHHhhhhHHHHHHHHHHHHHHhhhcccccch
Q 025586 103 YVMIEQDLEEREDFIASLESRFLFLAADARST 134 (250)
Q Consensus 103 y~~~~~~~~~R~~~i~~IE~RfqfLAADs~tv 134 (250)
|...+...++-+.+++.|++|++.+|+.....
T Consensus 38 H~~f~~~~~e~~~~~D~lAERi~~lGg~p~~~ 69 (151)
T d1umna_ 38 HPKMDEYMEEIDGYLDEMSERLITLGGAPFST 69 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcC
Confidence 44467777788888999999999999987433
No 7
>d1o9ra_ a.25.1.1 (A:) Dodecameric ferritin homolog {Agrobacterium tumefaciens, Dps [TaxId: 358]}
Probab=29.71 E-value=48 Score=24.18 Aligned_cols=30 Identities=10% Similarity=0.120 Sum_probs=23.8
Q ss_pred hHHHhhhhHHHHHHHHHHHHHHhhhccccc
Q 025586 103 YVMIEQDLEEREDFIASLESRFLFLAADAR 132 (250)
Q Consensus 103 y~~~~~~~~~R~~~i~~IE~RfqfLAADs~ 132 (250)
|...+...++=..+.+.|++|++.+|+...
T Consensus 52 H~~~~~~~~~~~~~~D~iAERi~~LG~~p~ 81 (162)
T d1o9ra_ 52 HELLDTFRTQLDNHGDTIAERVVQLGGTAL 81 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 334566666677788999999999999994
No 8
>d2fjca1 a.25.1.1 (A:27-177) Dodecameric ferritin homolog {Treponema pallidum, TpF1 [TaxId: 160]}
Probab=25.87 E-value=55 Score=23.30 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=25.6
Q ss_pred hHHHhhhhHHHHHHHHHHHHHHhhhcccccchh
Q 025586 103 YVMIEQDLEEREDFIASLESRFLFLAADARSTL 135 (250)
Q Consensus 103 y~~~~~~~~~R~~~i~~IE~RfqfLAADs~tvL 135 (250)
|...+..-++=+.+++.|++|++.||+....++
T Consensus 43 H~~f~~~y~~~~~~~D~iAERi~~Lgg~p~~t~ 75 (151)
T d2fjca1 43 HELLEEYYVSVTEAFDTIAERLLQLGAQAPASM 75 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCH
Confidence 444666667777788999999999999995443
No 9
>d1d0qa_ g.41.3.2 (A:) Zinc-binding domain of DNA primase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=24.79 E-value=9 Score=27.16 Aligned_cols=37 Identities=11% Similarity=0.035 Sum_probs=29.5
Q ss_pred HHhhh----cccccchhcc-CCchHHHHHHHHHHhcCCCCCC
Q 025586 123 RFLFL----AADARSTLRG-WRPSYRNVLLAVRKNLNIPCSS 159 (250)
Q Consensus 123 RfqfL----AADs~tvLRG-~~vsYReVLl~VckkLKI~~s~ 159 (250)
.+.+| +||.++.++- .+.+|.+++..++++.+|+...
T Consensus 57 ~~~Cf~Cg~~Gd~i~fv~~~~~~sf~eAv~~La~~~gi~l~~ 98 (102)
T d1d0qa_ 57 IFHCFGCGAGGNAFTFLMDIEGIPFVEAAKRLAAKAGVDLSV 98 (102)
T ss_dssp EEEETTTCCEECHHHHHHHHHTCCHHHHHHHHHHHHTCCCGG
T ss_pred heeeehhcccccHHHHHHHHHCcCHHHHHHHHHHHhCCCCCC
Confidence 46666 5666777775 5999999999999999998653
No 10
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=23.89 E-value=13 Score=28.97 Aligned_cols=39 Identities=8% Similarity=0.090 Sum_probs=29.1
Q ss_pred HHHHHHhhhcccccchhccCCchHHHHHHHHHHhcCCCC
Q 025586 119 SLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIPC 157 (250)
Q Consensus 119 ~IE~RfqfLAADs~tvLRG~~vsYReVLl~VckkLKI~~ 157 (250)
.++..|+.+..=++|++|=++..--+..++.|+++||-.
T Consensus 40 ~~~~~l~~~k~~G~N~iR~~~~~~~~~f~d~~D~~Gi~V 78 (339)
T d2vzsa5 40 AAADKLKYVLNLGLNTVRLEGHIEPDEFFDIADDLGVLT 78 (339)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCCCCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCCHHHHHHHHHCCCeE
Confidence 345566666655689999765555678999999999974
No 11
>d1oeya_ d.15.2.2 (A:) Neutrophil cytosol factor 2 (p67phox component of NADPH oxidase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.05 E-value=23 Score=25.18 Aligned_cols=22 Identities=23% Similarity=0.132 Sum_probs=19.6
Q ss_pred cCCchHHHHHHHHHHhcCCCCC
Q 025586 137 GWRPSYRNVLLAVRKNLNIPCS 158 (250)
Q Consensus 137 G~~vsYReVLl~VckkLKI~~s 158 (250)
++|.+|.+++--||+||+.+-.
T Consensus 21 ~~G~~y~~L~~lvs~KL~l~~~ 42 (82)
T d1oeya_ 21 QPGLPYSQVRDMVSKKLELRLE 42 (82)
T ss_dssp CTTCCHHHHHHHHHHHTTCCGG
T ss_pred cCCCCHHHHHHHHHHHhCCChh
Confidence 5799999999999999998754
No 12
>d2bk6a1 a.25.1.1 (A:7-156) Dodecameric ferritin homolog {Listeria innocua [TaxId: 1642]}
Probab=22.49 E-value=75 Score=22.50 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=25.8
Q ss_pred hHHHhhhhHHHHHHHHHHHHHHhhhcccccchh
Q 025586 103 YVMIEQDLEEREDFIASLESRFLFLAADARSTL 135 (250)
Q Consensus 103 y~~~~~~~~~R~~~i~~IE~RfqfLAADs~tvL 135 (250)
|...+..-++=+.+++.|++|++.||+.....+
T Consensus 37 H~~~e~~y~~~~~~~D~iAERi~~Lg~~p~~~~ 69 (150)
T d2bk6a1 37 HEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTL 69 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCH
Confidence 444666677777889999999999999985443
No 13
>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}
Probab=22.29 E-value=36 Score=27.76 Aligned_cols=31 Identities=26% Similarity=0.364 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhcCCCCCCCCChHHHHHHHHH-HHHhh
Q 025586 142 YRNVLLAVRKNLNIPCSSKLSTEDLEAEIFL-HLLQE 177 (250)
Q Consensus 142 YReVLl~VckkLKI~~s~klsT~dLEaEIFL-hLL~~ 177 (250)
|++.|.+..++|+ +..+..+|+|++| |.|+.
T Consensus 2 ~~~~l~~~~~~l~-----~~~~p~~da~~ll~~~l~~ 33 (274)
T d2b3ta1 2 YQHWLREAISQLQ-----ASESPRRDAEILLEHVTGR 33 (274)
T ss_dssp HHHHHHHHHHTTT-----TSSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHhCc
Confidence 8999999999986 2357788988877 66655
No 14
>d1n1qa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus brevis, Dps [TaxId: 1393]}
Probab=21.39 E-value=70 Score=22.72 Aligned_cols=32 Identities=22% Similarity=0.222 Sum_probs=24.7
Q ss_pred hHHHhhhhHHHHHHHHHHHHHHhhhcccccch
Q 025586 103 YVMIEQDLEEREDFIASLESRFLFLAADARST 134 (250)
Q Consensus 103 y~~~~~~~~~R~~~i~~IE~RfqfLAADs~tv 134 (250)
|...+..-++=+..++.|++|++.+|+.....
T Consensus 43 H~~~ee~y~e~~~~~D~iAERi~~Lgg~p~~~ 74 (149)
T d1n1qa_ 43 HEKFEELYTEASGHIDTLAERVLSIGGSPIAT 74 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCCcc
Confidence 44466666666678899999999999998543
No 15
>d1or7a2 a.177.1.1 (A:-1-111) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=21.30 E-value=34 Score=23.17 Aligned_cols=32 Identities=16% Similarity=0.347 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhh
Q 025586 142 YRNVLLAVRKNLNIPCSSKLSTEDLEAEIFLHLLQE 177 (250)
Q Consensus 142 YReVLl~VckkLKI~~s~klsT~dLEaEIFLhLL~~ 177 (250)
|...|..+|.++ + ... ..+||=+|+|+.+.++
T Consensus 31 y~~~l~~~~~~~-~--~~~-daeDl~Qe~~l~~~~~ 62 (113)
T d1or7a2 31 YQHKVASLVSRY-V--PSG-DVPDVVQEAFIKAYRA 62 (113)
T ss_dssp HHHHHHHHHTTT-S--CGG-GHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-c--CCc-hHHHHHHHHHHHHHHh
Confidence 778888888776 3 333 5899999999999987
No 16
>d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.14 E-value=20 Score=25.10 Aligned_cols=29 Identities=17% Similarity=0.138 Sum_probs=20.2
Q ss_pred cccc-cchhcc-CCchHHHHHHHHHHhcCCC
Q 025586 128 AADA-RSTLRG-WRPSYRNVLLAVRKNLNIP 156 (250)
Q Consensus 128 AADs-~tvLRG-~~vsYReVLl~VckkLKI~ 156 (250)
..++ +.+++= -+-.-.|||.++|+|+|+.
T Consensus 7 ~~~~rR~~VKvtP~t~l~~VL~eaC~k~~~~ 37 (76)
T d2al3a1 7 APNGRRHTVKVTPSTVLLQVLEDTCRRQDFN 37 (76)
T ss_dssp CTTSCEEEECCCTTSBHHHHHHHHHHHTTCC
T ss_pred CCCCcEEEEEeCCCcCHHHHHHHHHHHhCCC
Confidence 3344 244443 3667789999999999985
No 17
>d1jiga_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-2 [TaxId: 1392]}
Probab=20.75 E-value=74 Score=22.44 Aligned_cols=30 Identities=23% Similarity=0.258 Sum_probs=24.1
Q ss_pred hHHHhhhhHHHHHHHHHHHHHHhhhccccc
Q 025586 103 YVMIEQDLEEREDFIASLESRFLFLAADAR 132 (250)
Q Consensus 103 y~~~~~~~~~R~~~i~~IE~RfqfLAADs~ 132 (250)
|...+..-++=+..++.|++|++.+|+...
T Consensus 40 H~~~~e~~~~~~~~~D~iAERi~~lgg~p~ 69 (146)
T d1jiga_ 40 HEKFEEFYNEAGTYIDELAERILALEGKPL 69 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCc
Confidence 444666667777788999999999999884
No 18
>d1w0ha_ c.55.3.5 (A:) Exonuclease ERI1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.62 E-value=34 Score=24.62 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=25.6
Q ss_pred HHHHHHHhcCCCCCC--C--CChHHHHHHHHHHHHhh
Q 025586 145 VLLAVRKNLNIPCSS--K--LSTEDLEAEIFLHLLQE 177 (250)
Q Consensus 145 VLl~VckkLKI~~s~--k--lsT~dLEaEIFLhLL~~ 177 (250)
=|-.+|+++||+.+. . +.-...=++||.+|+++
T Consensus 154 ~L~~l~~~~gi~~~~~aH~Al~Da~~~a~v~~~ll~~ 190 (200)
T d1w0ha_ 154 KLTIMLEKLGMDYDGRPHCGLDDSKNIARIAVRMLQD 190 (200)
T ss_dssp SHHHHHHHTTCCCCSCTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCCCcChHHHHHHHHHHHHHHHHc
Confidence 389999999999863 2 34555668899999987
Done!