BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025588
(250 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/249 (78%), Positives = 214/249 (85%), Gaps = 1/249 (0%)
Query: 2 GKCYPKVSDEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIR 61
GK YP VS +YQKAVEK K+KLRG IAEK CAP++LRLAWHSAGT+D TKTGGPFGTI+
Sbjct: 1 GKSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFGTIK 60
Query: 62 HPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPD 121
HP ELAH ANNGLDIAVRLLEP++ +FPILSYADFYQLAGVVAVEVTGGPE+PFHPGR D
Sbjct: 61 HPAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGRED 120
Query: 122 KSDPPPEGRLPNATKGSDHLRDVFGH-MGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTN 180
K +PPPEGRLP+ATKGSDHLRDVFG MGL+D++IV LSGGHT+G HKERSGFEGPWT+
Sbjct: 121 KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTS 180
Query: 181 NPLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLK 240
NPLIFDNSYF PSDKALL DPVFRPLV+KYAADEDA FADYAEAH K
Sbjct: 181 NPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQK 240
Query: 241 LSELGFADA 249
LSELGFADA
Sbjct: 241 LSELGFADA 249
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 402 bits (1034), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/249 (78%), Positives = 213/249 (85%), Gaps = 1/249 (0%)
Query: 2 GKCYPKVSDEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIR 61
GK YP VS +YQKA+EK KRKLRG IAEK CAP+ILRLAWHSAGT+D TKTGGPFGTI+
Sbjct: 1 GKSYPTVSPDYQKAIEKAKRKLRGFIAEKKCAPLILRLAWHSAGTFDSKTKTGGPFGTIK 60
Query: 62 HPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPD 121
H ELAH ANNGLDIAVRLLEPI++QFPI+SYADFYQLAGVVAVE+TGGPE+PFHPGR D
Sbjct: 61 HQAELAHGANNGLDIAVRLLEPIKEQFPIVSYADFYQLAGVVAVEITGGPEVPFHPGRED 120
Query: 122 KSDPPPEGRLPNATKGSDHLRDVFGH-MGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTN 180
K +PPPEGRLP+ATKGSDHLRDVFG MGLSD++IV LSGGHT+G HKERSGFEGPWT+
Sbjct: 121 KPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTS 180
Query: 181 NPLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLK 240
NPLIFDNSYF PSDKALL D VFRPLVEKYAADED FADYAEAHLK
Sbjct: 181 NPLIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFFADYAEAHLK 240
Query: 241 LSELGFADA 249
LSELGFA+A
Sbjct: 241 LSELGFAEA 249
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 402 bits (1034), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/249 (78%), Positives = 214/249 (85%), Gaps = 1/249 (0%)
Query: 2 GKCYPKVSDEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIR 61
GK YP VS +YQKAVEK K+KLRG IAEK CAP++L+LAWHSAGT+D TKTGGPFGTI+
Sbjct: 1 GKSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLKLAWHSAGTFDKGTKTGGPFGTIK 60
Query: 62 HPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPD 121
HP ELAH ANNGLDIAVRLLEP++ +FPILSYADFYQLAGVVAVEVTGGPE+PFHPGR D
Sbjct: 61 HPAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGRED 120
Query: 122 KSDPPPEGRLPNATKGSDHLRDVFGH-MGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTN 180
K +PPPEGRLP+ATKGSDHLRDVFG MGL+D++IV LSGGHT+G HKERSGFEGPWT+
Sbjct: 121 KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTS 180
Query: 181 NPLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLK 240
NPLIFDNSYF PSDKALL DPVFRPLV+KYAADEDA FADYAEAH K
Sbjct: 181 NPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQK 240
Query: 241 LSELGFADA 249
LSELGFADA
Sbjct: 241 LSELGFADA 249
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 402 bits (1034), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/248 (78%), Positives = 213/248 (85%), Gaps = 1/248 (0%)
Query: 3 KCYPKVSDEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIRH 62
K YP VS +YQKAVEK K+KLRG IAEK CAP++LRLAWHSAGT+D TKTGGPFGTI+H
Sbjct: 14 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFGTIKH 73
Query: 63 PDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDK 122
P ELAH ANNGLDIAVRLLEP++ +FPILSYADFYQLAGVVAVEVTGGPE+PFHPGR DK
Sbjct: 74 PAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK 133
Query: 123 SDPPPEGRLPNATKGSDHLRDVFGH-MGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNN 181
+PPPEGRLP+ATKGSDHLRDVFG MGL+D++IV LSGGHT+G HKERSGFEGPWT+N
Sbjct: 134 PEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSN 193
Query: 182 PLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKL 241
PLIFDNSYF PSDKALL DPVFRPLV+KYAADEDA FADYAEAH KL
Sbjct: 194 PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 253
Query: 242 SELGFADA 249
SELGFADA
Sbjct: 254 SELGFADA 261
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 402 bits (1033), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/248 (78%), Positives = 213/248 (85%), Gaps = 1/248 (0%)
Query: 3 KCYPKVSDEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIRH 62
K YP VS +YQKAVEK K+KLRG IAEK CAP++LRLAWHSAGT+D TKTGGPFGTI+H
Sbjct: 14 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFGTIKH 73
Query: 63 PDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDK 122
P ELAH ANNGLDIAVRLLEP++ +FPILSYADFYQLAGVVAVEVTGGPE+PFHPGR DK
Sbjct: 74 PAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK 133
Query: 123 SDPPPEGRLPNATKGSDHLRDVFGH-MGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNN 181
+PPPEGRLP+ATKGSDHLRDVFG MGL+D++IV LSGGHT+G HKERSGFEGPWT+N
Sbjct: 134 PEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSN 193
Query: 182 PLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKL 241
PLIFDNSYF PSDKALL DPVFRPLV+KYAADEDA FADYAEAH KL
Sbjct: 194 PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 253
Query: 242 SELGFADA 249
SELGFADA
Sbjct: 254 SELGFADA 261
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/249 (78%), Positives = 213/249 (85%), Gaps = 1/249 (0%)
Query: 2 GKCYPKVSDEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIR 61
GK YP VS +YQKAVEK K+KLRG IAEK CAP++L LAWHSAGT+D TKTGGPFGTI+
Sbjct: 1 GKSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLALAWHSAGTFDKGTKTGGPFGTIK 60
Query: 62 HPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPD 121
HP ELAH ANNGLDIAVRLLEP++ +FPILSYADFYQLAGVVAVEVTGGPE+PFHPGR D
Sbjct: 61 HPAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGRED 120
Query: 122 KSDPPPEGRLPNATKGSDHLRDVFGH-MGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTN 180
K +PPPEGRLP+ATKGSDHLRDVFG MGL+D++IV LSGGHT+G HKERSGFEGPWT+
Sbjct: 121 KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTS 180
Query: 181 NPLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLK 240
NPLIFDNSYF PSDKALL DPVFRPLV+KYAADEDA FADYAEAH K
Sbjct: 181 NPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQK 240
Query: 241 LSELGFADA 249
LSELGFADA
Sbjct: 241 LSELGFADA 249
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 400 bits (1027), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/248 (78%), Positives = 212/248 (85%), Gaps = 1/248 (0%)
Query: 3 KCYPKVSDEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIRH 62
K YP VS +YQKAVEK K+KLRG IAEK CAP++LRLAWHSAGT+D TKTGGPFGTI+H
Sbjct: 14 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFGTIKH 73
Query: 63 PDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDK 122
P ELAH ANNGLDIAVRLLEP++ +FPILSYADFYQLAGVVAVEVTGGPE+PFHPGR DK
Sbjct: 74 PAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK 133
Query: 123 SDPPPEGRLPNATKGSDHLRDVFGH-MGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNN 181
+PPPEGRLP+ATKGSDHLRDVFG MGL+D++IV LSGGHT+G HKE SGFEGPWT+N
Sbjct: 134 PEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKEASGFEGPWTSN 193
Query: 182 PLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKL 241
PLIFDNSYF PSDKALL DPVFRPLV+KYAADEDA FADYAEAH KL
Sbjct: 194 PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 253
Query: 242 SELGFADA 249
SELGFADA
Sbjct: 254 SELGFADA 261
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 399 bits (1026), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/248 (78%), Positives = 212/248 (85%), Gaps = 1/248 (0%)
Query: 3 KCYPKVSDEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIRH 62
K YP VS +YQKAVEK K+KLRG IAEK CAP++LRLAW SAGT+D TKTGGPFGTI+H
Sbjct: 14 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWASAGTFDKGTKTGGPFGTIKH 73
Query: 63 PDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDK 122
P ELAH ANNGLDIAVRLLEP++ +FPILSYADFYQLAGVVAVEVTGGPE+PFHPGR DK
Sbjct: 74 PAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK 133
Query: 123 SDPPPEGRLPNATKGSDHLRDVFGH-MGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNN 181
+PPPEGRLP+ATKGSDHLRDVFG MGL+D++IV LSGGHT+G HKERSGFEGPWT+N
Sbjct: 134 PEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSN 193
Query: 182 PLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKL 241
PLIFDNSYF PSDKALL DPVFRPLV+KYAADEDA FADYAEAH KL
Sbjct: 194 PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 253
Query: 242 SELGFADA 249
SELGFADA
Sbjct: 254 SELGFADA 261
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/249 (77%), Positives = 213/249 (85%), Gaps = 1/249 (0%)
Query: 2 GKCYPKVSDEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIR 61
GK YP VS +YQKAVEK K+KLRG IAEK CAP++LRLA +SAGT+D TKTGGPFGTI+
Sbjct: 1 GKSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAAYSAGTFDKGTKTGGPFGTIK 60
Query: 62 HPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPD 121
HP ELAH ANNGLDIAVRLLEP++ +FPILSYADFYQLAGVVAVEVTGGPE+PFHPGR D
Sbjct: 61 HPAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGRED 120
Query: 122 KSDPPPEGRLPNATKGSDHLRDVFGH-MGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTN 180
K +PPPEGRLP+ATKGSDHLRDVFG MGL+D++IV LSGGHT+G HKERSGFEGPWT+
Sbjct: 121 KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTS 180
Query: 181 NPLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLK 240
NPLIFDNSYF PSDKALL DPVFRPLV+KYAADEDA FADYAEAH K
Sbjct: 181 NPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQK 240
Query: 241 LSELGFADA 249
LSELGFADA
Sbjct: 241 LSELGFADA 249
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/248 (78%), Positives = 212/248 (85%), Gaps = 1/248 (0%)
Query: 3 KCYPKVSDEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIRH 62
K YP VS +YQKAVEK K+KLRG IAEK CAP++LRLA HSAGT+D TKTGGPFGTI+H
Sbjct: 14 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAAHSAGTFDKGTKTGGPFGTIKH 73
Query: 63 PDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDK 122
P ELAH ANNGLDIAVRLLEP++ +FPILSYADFYQLAGVVAVEVTGGPE+PFHPGR DK
Sbjct: 74 PAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK 133
Query: 123 SDPPPEGRLPNATKGSDHLRDVFGH-MGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNN 181
+PPPEGRLP+ATKGSDHLRDVFG MGL+D++IV LSGGHT+G HKERSGFEGPWT+N
Sbjct: 134 PEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSN 193
Query: 182 PLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKL 241
PLIFDNSYF PSDKALL DPVFRPLV+KYAADEDA FADYAEAH KL
Sbjct: 194 PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 253
Query: 242 SELGFADA 249
SELGFADA
Sbjct: 254 SELGFADA 261
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/248 (77%), Positives = 211/248 (85%), Gaps = 1/248 (0%)
Query: 3 KCYPKVSDEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIRH 62
K YP VS +YQKAVEK K+KLRG IAEK CAP++LRLA SAGT+D TKTGGPFGTI+H
Sbjct: 14 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAAMSAGTFDKGTKTGGPFGTIKH 73
Query: 63 PDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDK 122
P ELAH ANNGLDIAVRLLEP++ +FPILSYADFYQLAGVVAVEVTGGPE+PFHPGR DK
Sbjct: 74 PAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK 133
Query: 123 SDPPPEGRLPNATKGSDHLRDVFGH-MGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNN 181
+PPPEGRLP+ATKGSDHLRDVFG MGL+D++IV LSGGHT+G HKERSGFEGPWT+N
Sbjct: 134 PEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSN 193
Query: 182 PLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKL 241
PLIFDNSYF PSDKALL DPVFRPLV+KYAADEDA FADYAEAH KL
Sbjct: 194 PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 253
Query: 242 SELGFADA 249
SELGFADA
Sbjct: 254 SELGFADA 261
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 394 bits (1011), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/248 (77%), Positives = 211/248 (85%), Gaps = 1/248 (0%)
Query: 3 KCYPKVSDEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIRH 62
K YP VS +YQKAVEK K+KLRG IAEK CAP++LRLA SAGT+D TKTGGPFGTI+H
Sbjct: 14 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAACSAGTFDKGTKTGGPFGTIKH 73
Query: 63 PDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDK 122
P ELAH ANNGLDIAVRLLEP++ +FPILSYADFYQLAGVVAVEVTGGPE+PFHPGR DK
Sbjct: 74 PAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK 133
Query: 123 SDPPPEGRLPNATKGSDHLRDVFGH-MGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNN 181
+PPPEGRLP+ATKGSDHLRDVFG MGL+D++IV LSGGHT+G HKERSGFEGPWT+N
Sbjct: 134 PEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSN 193
Query: 182 PLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKL 241
PLIFDNSYF PSDKALL DPVFRPLV+KYAADEDA FADYAEAH KL
Sbjct: 194 PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 253
Query: 242 SELGFADA 249
SELGFADA
Sbjct: 254 SELGFADA 261
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 206 bits (523), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/263 (45%), Positives = 151/263 (57%), Gaps = 27/263 (10%)
Query: 8 VSDEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNT----KTGGPFGTIRHP 63
SD Q ++ + ++ L+ K C PI++RL WH AGTY+ N + GG G++R
Sbjct: 2 ASDSAQ--LKSAREDIKELLKTKFCHPIMVRLGWHDAGTYNKNIEEWPQRGGANGSLRFD 59
Query: 64 DELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKS 123
EL H AN GL A+ LL+PI+ ++ ++YAD +QLA A+E GGP+IP GR D +
Sbjct: 60 VELKHGANAGLVNALNLLKPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVT 119
Query: 124 DP---PPEGRLPNATKGS--DHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGP- 177
+P P EGRLP+A S HLRDVF MGL+DKEIV LSG HTLGR +RSG+ P
Sbjct: 120 EPEQCPEEGRLPDAGPPSPAQHLRDVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPE 179
Query: 178 ---------------WTNNPLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEK 222
WT L FDNSYF P+D AL EDP F+ EK
Sbjct: 180 TKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKERRDEDLLVLPTDAALFEDPSFKVYAEK 239
Query: 223 YAADEDAVFADYAEAHLKLSELG 245
YAAD +A F DYAEAH KLS LG
Sbjct: 240 YAADPEAFFKDYAEAHAKLSNLG 262
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In
Cytochrome C Peroxidase (Ccp)
Length = 294
Score = 178 bits (451), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 146/267 (54%), Gaps = 25/267 (9%)
Query: 2 GKCYPKVSDEYQKAVEKCKRKLRGLIAEKHC---APIILRLAWHSAGTYDVNTKTGGPFG 58
G+ Y +++QK KLR + P+++RLAWH++GT+D + TGG +G
Sbjct: 13 GRSY----EDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYG 68
Query: 59 -TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHP 117
T R E +N GL + LEPI ++FP +S D + L GV AV+ GP+IP+
Sbjct: 69 GTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRC 128
Query: 118 GRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFE 175
GR D + P GRLP+A K +D++R F + ++D+E+V L G HTLG+ H + SG+E
Sbjct: 129 GRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLNMNDREVVALMGAHTLGKTHLKNSGYE 188
Query: 176 GPWTNNPLIFDNSYF---------------XXXXXXXXXXXXXXPSDKALLEDPVFRPLV 220
GPWT NP +FDNS++ P+D +L++DP + +V
Sbjct: 189 GPWTANPNVFDNSFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIV 248
Query: 221 EKYAADEDAVFADYAEAHLKLSELGFA 247
++YA D+D F D+++A KL E G
Sbjct: 249 KEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major
Peroxidase-Cytochrome C Complex
Length = 268
Score = 177 bits (449), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 134/251 (53%), Gaps = 21/251 (8%)
Query: 16 VEKCKRKLRGLIAEK-HCAPIILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNG 73
+ + + +I+EK P ++RLAWH A +YD K G P ++R E + N G
Sbjct: 8 IRALRADIEDMISEKLELGPSLIRLAWHEAASYDCFKKDGSPNSASMRFKPECLYAGNKG 67
Query: 74 LDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP---PEGR 130
LDI + LE +++++P +SYAD + LA VA+E GGP IPF GR D D P+GR
Sbjct: 68 LDIPRKALETLKKKYPQISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPDGR 127
Query: 131 LPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF 190
LP+ +K H+R+VF +G +D+E V L G HT G CH E SG+ GPWT++ FDNS+F
Sbjct: 128 LPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHIEFSGYHGPWTHDKNGFDNSFF 187
Query: 191 XXX----------------XXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADY 234
PSD LL DP +R VE YA D D D+
Sbjct: 188 TQLLDEDWVLNPKVEQMQLMDRATTKLMMLPSDVCLLLDPSYRKYVELYAKDNDRFNKDF 247
Query: 235 AEAHLKLSELG 245
A A KL+ELG
Sbjct: 248 ANAFKKLTELG 258
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
pdb|3RIV|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Length = 271
Score = 177 bits (449), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 134/251 (53%), Gaps = 21/251 (8%)
Query: 16 VEKCKRKLRGLIAEK-HCAPIILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNG 73
+ + + +I+EK P ++RLAWH A +YD K G P ++R E + N G
Sbjct: 9 IRALRADIEDMISEKLELGPSLIRLAWHEAASYDCFKKDGSPNSASMRFKPECLYAGNKG 68
Query: 74 LDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP---PEGR 130
LDI + LE +++++P +SYAD + LA VA+E GGP IPF GR D D P+GR
Sbjct: 69 LDIPRKALETLKKKYPQISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPDGR 128
Query: 131 LPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF 190
LP+ +K H+R+VF +G +D+E V L G HT G CH E SG+ GPWT++ FDNS+F
Sbjct: 129 LPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHIEFSGYHGPWTHDKNGFDNSFF 188
Query: 191 XXX----------------XXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADY 234
PSD LL DP +R VE YA D D D+
Sbjct: 189 TQLLDEDWVLNPKVEQMQLMDRATTKLMMLPSDVCLLLDPSYRKYVELYAKDNDRFNKDF 248
Query: 235 AEAHLKLSELG 245
A A KL+ELG
Sbjct: 249 ANAFKKLTELG 259
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m3
Length = 294
Score = 177 bits (449), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 146/267 (54%), Gaps = 25/267 (9%)
Query: 2 GKCYPKVSDEYQKAVEKCKRKLRGLIAEKHC---APIILRLAWHSAGTYDVNTKTGGPFG 58
G+ Y +++QK KLR + P+++RLAWH++GT+D + TGG +G
Sbjct: 13 GRSY----EDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYG 68
Query: 59 -TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHP 117
T R E +N GL + LEPI ++FP +S D + L GV AV+ GP+IP+
Sbjct: 69 GTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRC 128
Query: 118 GRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFE 175
GR D + P GRLP+A K +D++R F + ++D+E+V LSG HTLG+ H + SG+E
Sbjct: 129 GRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLNMNDREVVALSGAHTLGKTHLKNSGYE 188
Query: 176 GPWTNNPLIFDNSYF---------------XXXXXXXXXXXXXXPSDKALLEDPVFRPLV 220
GPWT N +FDNS++ P+D +L++DP + +V
Sbjct: 189 GPWTANNNVFDNSFYLNLLNEDWKLEKNDANNEQWDSKSGYLQLPTDYSLIQDPKYLSIV 248
Query: 221 EKYAADEDAVFADYAEAHLKLSELGFA 247
++YA D+D F D+++A KL E G
Sbjct: 249 KEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding
Variant Of Cytochrome C Peroxidase
Length = 294
Score = 175 bits (443), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 133/233 (57%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH++GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K +D++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G HTLG+ H + SG+EGPWT N +FDNS++
Sbjct: 163 MNDREVVALMGAHTLGKTHLKNSGYEGPWTANNNVFDNSFYLNLLNEDWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m2
Length = 294
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 133/233 (57%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH++GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K +D++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G HTLG+ H + SG+EGPWT N +FDNS++
Sbjct: 163 MNDREVVALMGAHTLGKTHLKNSGYEGPWTANNNVFDNSFYLNLLNEDWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYLQLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
pdb|3RIW|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
Length = 271
Score = 173 bits (439), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 133/251 (52%), Gaps = 21/251 (8%)
Query: 16 VEKCKRKLRGLIAEK-HCAPIILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNG 73
+ + + +I+EK P ++RLAWH A +YD K G P ++R E + N G
Sbjct: 9 IRALRADIEDMISEKLELGPSLIRLAWHEAASYDCFKKDGSPNSASMRFKPECLYAGNKG 68
Query: 74 LDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP---PEGR 130
LDI + LE +++++P +SYAD + LA VA+E GGP IPF GR D D P+GR
Sbjct: 69 LDIPRKALETLKKKYPQISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPDGR 128
Query: 131 LPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF 190
LP+ +K H+R+VF +G +D+E V L G HT G H E SG+ GPWT++ FDNS+F
Sbjct: 129 LPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGETHIEFSGYHGPWTHDKNGFDNSFF 188
Query: 191 XXX----------------XXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADY 234
PSD LL DP +R VE YA D D D+
Sbjct: 189 TQLLDEDWVLNPKVEQMQLMDRATTKLMMLPSDVCLLLDPSYRKYVELYAKDNDRFNKDF 248
Query: 235 AEAHLKLSELG 245
A A KL+ELG
Sbjct: 249 ANAFKKLTELG 259
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome
C Peroxidase
Length = 287
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 140/256 (54%), Gaps = 22/256 (8%)
Query: 10 DEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAH 68
+++QK K IAEK C P+++RLAWH++GT+D + TGG +G T R E
Sbjct: 17 EDFQKVYNAIALK----IAEKKCGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFND 72
Query: 69 EANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPP 126
+N GL + LEPI ++FP +S D + L GV AV+ GP+IP+ GR D + P
Sbjct: 73 PSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTP 132
Query: 127 PEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFD 186
GRLP+A K +D++R F + ++D+E+V L G H LG+ H +RSG+EGP+ +F
Sbjct: 133 DNGRLPDADKDADYVRTFFQRLNMNDREVVALMGAHALGKTHLKRSGYEGPFGAANNVFT 192
Query: 187 NSYF---------------XXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVF 231
N ++ P+D +L++DP + +V++YA D+D F
Sbjct: 193 NEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFF 252
Query: 232 ADYAEAHLKLSELGFA 247
D+++A KL E G
Sbjct: 253 KDFSKAFEKLLENGIT 268
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C
Peroxidase (Ccp)
Length = 294
Score = 170 bits (431), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 143/267 (53%), Gaps = 25/267 (9%)
Query: 2 GKCYPKVSDEYQKAVEKCKRKLRGLIAEKHC---APIILRLAWHSAGTYDVNTKTGGPFG 58
G+ Y +++QK KLR + P+++RLAWH++GT+D + TGG +G
Sbjct: 13 GRSY----EDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYG 68
Query: 59 -TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHP 117
T R E +N GL + LEPI ++FP +S D + L GV AV+ GP+IP+
Sbjct: 69 GTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRC 128
Query: 118 GRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFE 175
GR D + P GRLP+A K +D++R F + ++D+E+V L G HTLG+ H + SG+E
Sbjct: 129 GRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLNMNDREVVALMGAHTLGKTHLKNSGYE 188
Query: 176 GPWTNNPLIFDNSYF---------------XXXXXXXXXXXXXXPSDKALLEDPVFRPLV 220
GPW +FDNS++ P+D +L++DP + +V
Sbjct: 189 GPWDATNNVFDNSFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIV 248
Query: 221 EKYAADEDAVFADYAEAHLKLSELGFA 247
++YA D+D F D+++A KL E G
Sbjct: 249 KEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C
Peroxidase Mutant N184r Y36a
Length = 294
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 141/267 (52%), Gaps = 25/267 (9%)
Query: 2 GKCYPKVSDEYQKAVEKCKRKLRGLIAEKHC---APIILRLAWHSAGTYDVNTKTGGPFG 58
G+ Y +++QK KLR + P+++RLAWH++GT+D + TGG +G
Sbjct: 13 GRSY----EDFQKVYNAIALKLREDDEYDNAIGYGPVLVRLAWHTSGTWDKHDNTGGSYG 68
Query: 59 -TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHP 117
T R E +N GL + LEPI ++FP +S D + L GV AV+ GP+IP+
Sbjct: 69 GTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRC 128
Query: 118 GRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFE 175
GR D + P GRLP+A K +D++R F + ++D+E+V L G H LG+ H +RSG+E
Sbjct: 129 GRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLNMNDREVVALMGAHALGKTHLKRSGYE 188
Query: 176 GPWTNNPLIFDNSYF---------------XXXXXXXXXXXXXXPSDKALLEDPVFRPLV 220
GPW +F N ++ P+D +L++DP + +V
Sbjct: 189 GPWGAANNVFTNEFYLNLLNENWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIV 248
Query: 221 EKYAADEDAVFADYAEAHLKLSELGFA 247
++YA D+D F D+++A KL E G
Sbjct: 249 KEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
Length = 296
Score = 166 bits (419), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 141/267 (52%), Gaps = 25/267 (9%)
Query: 2 GKCYPKVSDEYQKAVEKCKRKLRGLIAEKHC---APIILRLAWHSAGTYDVNTKTGGPFG 58
G+ Y +++QK KLR + P+++RLAWH++GT+D + TGG +G
Sbjct: 15 GRSY----EDFQKVYNAIALKLREDDEYDNAIGYGPVLVRLAWHTSGTWDKHDNTGGSYG 70
Query: 59 -TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHP 117
T R E +N GL + LEPI ++FP +S D + L GV AV+ GP+IP+
Sbjct: 71 GTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRC 130
Query: 118 GRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFE 175
GR D + P GRLP+A K +D++R F + ++D+E+V L G H LG+ H +RSG+E
Sbjct: 131 GRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLNMNDREVVALMGAHALGKTHLKRSGYE 190
Query: 176 GPWTNNPLIFDNSYF---------------XXXXXXXXXXXXXXPSDKALLEDPVFRPLV 220
GPW +F N ++ P+D +L++DP + +V
Sbjct: 191 GPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIV 250
Query: 221 EKYAADEDAVFADYAEAHLKLSELGFA 247
++YA D+D F D+++A KL E G
Sbjct: 251 KEYANDQDKFFKDFSKAFEKLLENGIT 277
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a
pdb|4A6Z|A Chain A, Cytochrome C Peroxidase With Bound Guaiacol
Length = 296
Score = 166 bits (419), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 141/267 (52%), Gaps = 25/267 (9%)
Query: 2 GKCYPKVSDEYQKAVEKCKRKLRGLIAEKHC---APIILRLAWHSAGTYDVNTKTGGPFG 58
G+ Y +++QK KLR + P+++RLAWH++GT+D + TGG +G
Sbjct: 15 GRSY----EDFQKVYNAIALKLREDDEYDNAIGYGPVLVRLAWHTSGTWDKHDNTGGSYG 70
Query: 59 -TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHP 117
T R E +N GL + LEPI ++FP +S D + L GV AV+ GP+IP+
Sbjct: 71 GTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRC 130
Query: 118 GRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFE 175
GR D + P GRLP+A K +D++R F + ++D+E+V L G H LG+ H +RSG+E
Sbjct: 131 GRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLNMNDREVVALMGAHALGKTHLKRSGYE 190
Query: 176 GPWTNNPLIFDNSYF---------------XXXXXXXXXXXXXXPSDKALLEDPVFRPLV 220
GPW +F N ++ P+D +L++DP + +V
Sbjct: 191 GPWGAANNVFTNEFYLNLLNENWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIV 250
Query: 221 EKYAADEDAVFADYAEAHLKLSELGFA 247
++YA D+D F D+++A KL E G
Sbjct: 251 KEYANDQDKFFKDFSKAFEKLLENGIT 277
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M25|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M26|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M27|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M28|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M29|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2A|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2B|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2C|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2D|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2E|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2F|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2G|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2H|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2I|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
Length = 291
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 129/233 (55%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH++GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 40 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K +D++R F +
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 159
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H +RSG+EGPW +F N ++
Sbjct: 160 MNDREVVALMGAHALGKTHLKRSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 272
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol
Length = 296
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 140/267 (52%), Gaps = 25/267 (9%)
Query: 2 GKCYPKVSDEYQKAVEKCKRKLRGLIAEKHC---APIILRLAWHSAGTYDVNTKTGGPFG 58
G+ Y +++QK KLR + P+++RLAWH++GT+D + TGG +G
Sbjct: 15 GRSY----EDFQKVYNAIALKLREDDEYDNAIGYGPVLVRLAWHTSGTWDKHDNTGGSYG 70
Query: 59 -TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHP 117
T R E +N GL + LEPI ++FP +S D + L GV AV+ GP+IP+
Sbjct: 71 GTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEWQGPKIPWRC 130
Query: 118 GRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFE 175
GR D + P GRLP+A K +D++R F + ++D+E+V L G H LG+ H + SG+E
Sbjct: 131 GRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSGYE 190
Query: 176 GPWTNNPLIFDNSYF---------------XXXXXXXXXXXXXXPSDKALLEDPVFRPLV 220
GPW +F N ++ P+D +L++DP + +V
Sbjct: 191 GPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIV 250
Query: 221 EKYAADEDAVFADYAEAHLKLSELGFA 247
++YA D+D F D+++A KL E G
Sbjct: 251 KEYANDQDKFFKDFSKAFEKLLENGIT 277
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I
Length = 294
Score = 163 bits (412), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 128/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH++GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K +D++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNENWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii
pdb|2XJ8|A Chain A, The Structure Of Ferrous Cytochrome C Peroxidase
Length = 294
Score = 163 bits (412), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 128/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH++GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K +D++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
pdb|3R99|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
Length = 293
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 128/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH++GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 42 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 101
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K +D++R F +
Sbjct: 102 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 161
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 162 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 221
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 222 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 274
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase
(Mpccp)
pdb|1ZBY|A Chain A, High-resolution Crystal Structure Of Native (resting)
Cytochrome C Peroxidase (ccp)
pdb|1ZBZ|A Chain A, High-Resolution Crystal Structure Of Compound I
Intermediate Of Cytochrome C Peroxidase (Ccp)
pdb|1S73|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (R-
Isomer) [mpccp-R]
pdb|1SBM|A Chain A, Crystal Structure Of Reduced Mesopone Cytochrome C
Peroxidase (R-Isomer)
pdb|1Z53|A Chain A, The 1.13 Angstrom Structure Of Iron-Free Cytochrome C
Peroxidase
pdb|1SDQ|A Chain A, Structure Of Reduced-No Adduct Of Mesopone Cytochrome C
Peroxidase
pdb|2B0Z|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82i Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B12|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82y Cytochrome C And Cytochrome C Peroxidase
pdb|2CYP|A Chain A, Crystal Structure Of Yeast Cytochrome C Peroxidase Refined
At 1.7-Angstroms Resolution
pdb|2YCG|A Chain A, Structure Of Unreduced Ferric Cytochrome C Peroxidase
Obtained By Multicrystal Method
Length = 294
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 128/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH++GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K +D++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C
Peroxidase Compound I
Length = 294
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 128/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH++GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K +D++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGIT 275
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant
Length = 294
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 128/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH++GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K +D++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H +RSG+EGPW +F N ++
Sbjct: 163 MNDREVVALMGAHALGKTHLKRSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+ +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYMMLPTXYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant
Length = 296
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 127/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH++GT+D + TGG +G T R E N GL + LEPI ++FP +
Sbjct: 45 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPWNAGLQNGFKFLEPIHKEFPWI 104
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K +D++R F +
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 164
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 277
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
pdb|1S6V|C Chain C, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
Length = 294
Score = 162 bits (409), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 127/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH++GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K +D++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRAGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW F N ++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNCFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site
pdb|2X08|A Chain A, Cytochrome C Peroxidase: Ascorbate Bound To The Engineered
Ascorbate Binding Site
Length = 293
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 143/267 (53%), Gaps = 25/267 (9%)
Query: 2 GKCYPKVSDEYQKAVEKCKRKLR-GLIAEKHCA--PIILRLAWHSAGTYDVNTKTGGPFG 58
G+ Y +++QK KLR A+ + P+++RLAWH++GT+D + TGG +G
Sbjct: 12 GRSY----EDFQKVYNAIALKLREDDEADNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYG 67
Query: 59 -TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHP 117
T R E +N GL + LEPI ++FP +S D + L GV AV+ GP+IP+
Sbjct: 68 GTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRC 127
Query: 118 GRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFE 175
GR D + P GRLP+A K +D++R F + ++D+E+V L G H LG+ H +RSG+E
Sbjct: 128 GRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLNMNDREVVALMGAHALGKTHLKRSGYE 187
Query: 176 GPWTNNPLIFDNSYF---------------XXXXXXXXXXXXXXPSDKALLEDPVFRPLV 220
GP+ +F N ++ P+D +L++DP + +V
Sbjct: 188 GPFGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIV 247
Query: 221 EKYAADEDAVFADYAEAHLKLSELGFA 247
++YA D+D F D+++A KL E G
Sbjct: 248 KEYANDQDRFFKDFSKAFEKLLENGIT 274
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase
Showing A Novel Trp-Tyr Covalent Cross-Link
pdb|1MKQ|A Chain A, Crystal Structure Of The Mutant Variant Of Cytochrome C
Peroxidase In The 'open' Uncross-Linked Form
pdb|1MKR|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase (Plate Like Crystals)
pdb|1ML2|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase With Zn(Ii)-(20-Oxo-Protoporphyrin Ix)
Length = 294
Score = 160 bits (406), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 128/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAW+++GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWYTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K +D++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase
Towards A Small Molecular Substrate Peroxidase By
Substituting Tyrosine For Phe 202
Length = 291
Score = 160 bits (405), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N Y+
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEYYLNLLNEDWKLEKNDANNEQ 219
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 272
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 160 MNDREVVALKGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 272
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 138/267 (51%), Gaps = 25/267 (9%)
Query: 2 GKCYPKVSDEYQKAVEKCKRKLRGLIAEKHC---APIILRLAWHSAGTYDVNTKTGGPFG 58
G+ Y +++QK KLR + P+++RLAWH +GT+D + TGG +G
Sbjct: 10 GRSY----EDFQKVYNAIALKLREDDEYDNAIGYGPVLVRLAWHISGTWDKHDNTGGSYG 65
Query: 59 -TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHP 117
T R E +N GL + LEPI ++FP +S D + L GV AV+ GP+IP+
Sbjct: 66 GTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRC 125
Query: 118 GRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFE 175
GR D + P GRLP+A K + ++R F + ++D+E+V L G H LG+ H + SG+E
Sbjct: 126 GRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSGYE 185
Query: 176 GPWTNNPLIFDNSYF---------------XXXXXXXXXXXXXXPSDKALLEDPVFRPLV 220
GPW +F N ++ P+D +L++DP + +V
Sbjct: 186 GPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIV 245
Query: 221 EKYAADEDAVFADYAEAHLKLSELGFA 247
++YA D+D F D+++A KL E G
Sbjct: 246 KEYANDQDKFFKDFSKAFEKLLEDGIT 272
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of
Cytochrome C Peroxidase By Structure-Based Engineering
Length = 296
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 45 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRAGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGCANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 277
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 46 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 105
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 106 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 165
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 166 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 225
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 226 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 278
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1-
Cytochrome C And Yeast Cytochrome C Peroxidase
pdb|2JTI|A Chain A, Solution Structure Of The Yeast Iso-1-Cytochrome C (T12a)
: Yeast Cytochrome C Peroxidase Complex
Length = 294
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCB|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|1U74|A Chain A, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U74|C Chain C, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U75|A Chain A, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|1U75|C Chain C, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|2BCN|A Chain A, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|2BCN|C Chain C, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|1CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 45 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 277
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
pdb|1BJ9|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGIT 272
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 220 WDSKSGYMHLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 272
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer
Between The Oxyferryl Heme And Trp 191 In Cytochrome C
Peroxidase Compound Ii
Length = 296
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 45 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 225 WDSKSGYIMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 277
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 157 bits (397), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P++++LAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 45 GPVLVKLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 277
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+ K + ++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDMDKDAGYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 157 bits (396), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 46 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 105
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 106 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 165
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 166 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 225
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P++ +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 226 WDSKSGYMMLPTEYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 278
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 157 bits (396), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 45 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P++ +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 225 WDSKSGYMMLPTNYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 277
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 157 bits (396), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N +
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEKYLNLLNEDWKLEKNDANNEQ 219
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 272
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 157 bits (396), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+ K + ++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDYDKDAGYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop
pdb|1CCJ|A Chain A, Conformer Selection By Ligand Binding Observed With
Protein Crystallography
Length = 294
Score = 156 bits (395), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N +
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEGYLNLLNEDWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase
pdb|1DJ5|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase With N-Hydroxyguanidine Bound
Length = 291
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++ LAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 40 GPVLVALAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 272
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 46 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 105
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 106 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 165
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 166 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 225
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+ +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 226 WDSKSGYMMLPTAYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 278
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++ LAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 45 GPVLVLLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 277
>pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement
With Exogenous Ligand
pdb|1CCG|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement
With Exogenous Ligand
Length = 291
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G LG+ H + SG+EGPW +F N ++
Sbjct: 160 MNDREVVALMGAGALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 272
>pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex,
Ph 6, 100k
pdb|1DSG|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 5, Room Temperature.
pdb|1DSO|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 6, Room Temperature.
pdb|1DSP|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 7, Room Temperature
Length = 292
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 41 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 100
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 101 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 160
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G LG+ H + SG+EGPW +F N ++
Sbjct: 161 MNDREVVALMGAGALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 220
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 221 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 273
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase
Length = 294
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 124/230 (53%), Gaps = 18/230 (7%)
Query: 36 ILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYA 94
++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +S
Sbjct: 46 LVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSG 105
Query: 95 DFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMGLSD 152
D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F + ++D
Sbjct: 106 DLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNMND 165
Query: 153 KEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXXXXX 197
+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 166 REVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDS 225
Query: 198 XXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 226 KSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
pdb|1BES|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGP+ +F N ++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPYGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGIT 272
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of
Cytochrome C Peroxidase Compound I
Length = 296
Score = 154 bits (390), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAW +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 45 GPVLVRLAWLISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 277
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 154 bits (389), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLA+H +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 45 GPVLVRLAFHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGPW +F N ++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 277
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The
Enzyme:peroxide Complex
pdb|3CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 154 bits (389), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 45 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGP+ +F N ++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPFGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 277
>pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex,
With Phosphate Bound, Ph 6, 100k
Length = 292
Score = 154 bits (389), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R + +N GL + LEPI ++FP +
Sbjct: 41 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKQFNDPSNAGLQNGFKFLEPIHKEFPWI 100
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 101 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 160
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G LG+ H + SG+EGPW +F N ++
Sbjct: 161 MNDREVVALMGAGALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 220
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 221 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 273
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
pdb|2ICV|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
Length = 291
Score = 154 bits (388), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 134/259 (51%), Gaps = 21/259 (8%)
Query: 10 DEYQKAVEKCKRKLRGLIAEKHC---APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDE 65
+++QK KLR ++ P ++RLAWH +GT+D + TGG +G T R E
Sbjct: 14 EDFQKVYNAIALKLREDDEYENYIGYGPELVRLAWHISGTWDKHDNTGGSYGGTYRFKKE 73
Query: 66 LAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KS 123
+N GL + LEPI ++FP +S D + L GV AV+ GP+IP+ GR D +
Sbjct: 74 FNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPED 133
Query: 124 DPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPL 183
P GRLP+A K + ++R F + ++D+E+V L G H LG+ + SG+EGPW
Sbjct: 134 TTPDNGRLPDADKDAGYVRTFFQRLNMNDREVVALMGAHALGKTELKNSGYEGPWGAANN 193
Query: 184 IFDNSYF---------------XXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADED 228
+F N ++ P+D +L++DP + +V++YA D+D
Sbjct: 194 VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQD 253
Query: 229 AVFADYAEAHLKLSELGFA 247
F D+++A KL E G
Sbjct: 254 KFFKDFSKAFEKLLENGIT 272
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 154 bits (388), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 45 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGP +F N ++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPQGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 277
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 290
Score = 153 bits (387), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 20/233 (8%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 41 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 100
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 101 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 160
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EG NN +F N ++
Sbjct: 161 MNDREVVALMGAHALGKTHLKNSGYEGGGANN--VFTNEFYLNLLNEDWKLEKNDANNEQ 218
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 219 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 271
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 289
Score = 153 bits (387), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 20/233 (8%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EG NN +F N ++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGGGANN--VFTNEFYLNLLNEDWKLEKNDANNEQ 217
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 218 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 270
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 153 bits (386), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGP +F N ++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPQGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGIT 272
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Pathway Excised In A Complex With A
Peptide Wire
Length = 295
Score = 153 bits (386), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 20/233 (8%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 46 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 105
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 106 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 165
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EG NN +F N ++
Sbjct: 166 MNDREVVALMGAHALGKTHLKNSGYEGGGANN--VFTNEFYLNLLNEDWKLEKNDANNEQ 223
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 224 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 276
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5-
Diaminopyridine
pdb|2AS1|A Chain A, Cytochrome C Peroxidase In Complex With Thiopheneamidine
pdb|2AS2|A Chain A, Cytochrome C Peroxidase In Complex With 2-Iminopiperidine
pdb|2AS3|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
pdb|2AS4|A Chain A, Cytochrome C Peroxidase In Complex With 3-Fluorocatechol
pdb|2AS6|A Chain A, Cytochrome C Peroxidase In Complex With Cyclopentylamine
pdb|2EUN|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,4-
Diaminopyrimidine
pdb|2EUO|A Chain A, Cytochrome C Peroxidase (ccp) In Complex With 1-methyl-1-
Lambda-5-pyridin-3-yl-amine
pdb|2EUP|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-5-
Picoline
pdb|2EUQ|A Chain A, Cytochrome C Peroxydase (Ccp) In Complex With 3-
Thienylmethylamine
pdb|2EUR|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 4-
Pyridylcarbinol
pdb|2EUS|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With Benzylamine
pdb|2EUT|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-4-
Picoline
pdb|2EUU|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With
1h-Imidazol-2- Ylmethanol
pdb|1AA4|A Chain A, Specificity Of Ligand Binding In A Buried Polar Cavity Of
Cytochrome C Peroxidase
pdb|1CMP|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMQ|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMT|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
pdb|1RYC|A Chain A, Cytochrome C Peroxidase W191g From Saccharomyces
Cerevisiae
pdb|2Y5A|A Chain A, Cytochrome C Peroxidase (Ccp) W191g Bound To
3-Aminopyridine
Length = 294
Score = 153 bits (386), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGP +F N ++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPE|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPF|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 45 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 104
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 105 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 164
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGP +F N ++
Sbjct: 165 MNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 224
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 225 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 277
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 40 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 99
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 100 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 159
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGP +F N ++
Sbjct: 160 MNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 219
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 220 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGIT 272
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With
2,6-Diaminopyridine
pdb|1AC4|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2,3,4-Trimethyl-1,3-Thiazole)
pdb|1AC8|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (3,4,5-Trimethylthiazole)
pdb|1AEB|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Methylthiazole)
pdb|1AED|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3,4-
Dimethylthiazole)
pdb|1AEE|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Aniline)
pdb|1AEF|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Aminopyridine)
pdb|1AEG|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (4-
Aminopyridine)
pdb|1AEH|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-4-
Methylthiazole)
pdb|1AEJ|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (1-
Vinylimidazole)
pdb|1AEK|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Indoline)
pdb|1AEM|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazo[1,2-
A]pyridine)
pdb|1AEN|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-5-
Methylthiazole)
pdb|1AEO|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-
Aminopyridine)
pdb|1AEQ|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2-Ethylimidazole)
pdb|1AES|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazole)
pdb|1AET|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (1-Methylimidazole)
pdb|1AEU|A Chain A, Specificity Of Ligand Binding In A Polar Cavity Of
Cytochrome C Peroxidase (2-Methylimidazole)
pdb|1AEV|A Chain A, Introduction Of Novel Substrate Oxidation Into Cytochrome
C Peroxidase By Cavity Complementation: Oxidation Of 2-
Aminothiazole And Covalent Modification Of The Enzyme
(2- Aminothiazole)
Length = 294
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGP +F N ++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGIT 275
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With
Cyclopentane-Carboximidamide
pdb|2RBV|X Chain X, Cytochrome C Peroxidase In Complex With
(1-Methyl-1h-Pyrrol-2-Yl)- Methylamine
pdb|2RBW|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1,2-dimethyl-1h-pyridin- 5-amine
pdb|2RBY|X Chain X, 1-methyl-5-imidazolecarboxaldehyde In Complex With
Cytochrome C Peroxidase W191g
pdb|2RBZ|X Chain X, Cytochrome C Peroxidase W191g In Complex 3-Methoxypyridine
pdb|2RC0|X Chain X, Cytochrome C Peroxidase W191g In Complex With 2-Imino-4-
Methylpiperdine
pdb|2RC2|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1-Methyl-2-Vinyl- Pyridinium
pdb|2RBT|X Chain X, N-Methylbenzylamine In Complex With Cytochrome C
Peroxidase W191g
pdb|2RBX|X Chain X, Cytochrome C Peroxidase W191g In Complex With
Pyrimidine-2,4,6- Triamine.
pdb|2RC1|X Chain X, Cytochrome C Peroxidase W191g In Complex With
2,4,5-Trimethyl-3- Oxazoline
Length = 292
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 41 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 100
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 101 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 160
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGP +F N ++
Sbjct: 161 MNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 220
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P+D +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 221 WDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGIT 273
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
Length = 294
Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 33 APIILRLAWHSAGTYDVNTKTGGPFG-TIRHPDELAHEANNGLDIAVRLLEPIEQQFPIL 91
P+++RLAWH +GT+D + TGG +G T R E +N GL + LEPI ++FP +
Sbjct: 43 GPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 92 SYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEGRLPNATKGSDHLRDVFGHMG 149
S D + L GV AV+ GP+IP+ GR D + P GRLP+A K + ++R F +
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLN 162
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYF---------------XXXX 194
++D+E+V L G H LG+ H + SG+EGP +F N ++
Sbjct: 163 MNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLNLLNEDWKLEKNDANNEQ 222
Query: 195 XXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFA 247
P++ +L++DP + +V++YA D+D F D+++A KL E G
Sbjct: 223 WDSKSGYMMLPTNYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGIT 275
>pdb|1UB2|A Chain A, Crystal Structure Of Catalase-Peroxidase From
Synechococcus Pcc 7942
Length = 720
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 127/360 (35%), Gaps = 127/360 (35%)
Query: 9 SDEYQKAVEKCKRKLRGLIAEK---------HCAPIILRLAWHSAGTYDVNTKTGGP-FG 58
+E QK K+ L+ L+ + H +++RL WH+AGTY + GG G
Sbjct: 52 QEEVQKLDAALKQDLQALMTDSQDWWPADWGHYGGLMIRLTWHAAGTYRIADGRGGAGTG 111
Query: 59 TIRHPDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVAVEVTG-------- 109
R + N LD A RLL PI+Q++ LS+AD AG +A E G
Sbjct: 112 NQRFAPLNSWPDNTNLDKARRLLWPIKQKYGNKLSWADLIAYAGTIAYESMGLKTFGFAF 171
Query: 110 GPEIPFHPGR-----PDKSDPPPEGR--------------------------------LP 132
G E +HP + P+K PP P
Sbjct: 172 GREDIWHPEKDIYWGPEKEWFPPSTNPNSRYTGDRELENPLAAVTMGLIYVNPEGVDGNP 231
Query: 133 NATKGSDHLRDVFGHMGLSDKEIVVLS-GGHTLGRCHKE--------------------- 170
+ K + +R F M ++D+E V L+ GGHT+G+CH
Sbjct: 232 DPLKTAHDVRVTFARMAMNDEETVALTAGGHTVGKCHGNGNAALLGPEPEGADVEDQGLG 291
Query: 171 --------------RSGFEGPWTNNPLIFDNSYFXXXXXXXXXXXXXXP----------- 205
SG EG WT +P +DN YF P
Sbjct: 292 WINKTQSGIGRNAVTSGLEGAWTPHPTQWDNGYFAVCSLNYDWELKKNPAGAWQWEPINP 351
Query: 206 ----------------------SDKALLEDPVFRPLVEKYAADEDAVFAD-YAEAHLKLS 242
+D A+ DP +R + E++ D A FAD +A A KL+
Sbjct: 352 REEDLPVDVEDPSIRRNLVMTDADMAMKMDPEYRKISERFYQDP-AYFADVFARAWFKLT 410
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 66/159 (41%), Gaps = 27/159 (16%)
Query: 36 ILRLAWHSAGTYDVNTKTGGPFGT-IRHPDELAHEAN--NGLDIAVRLLEPIEQQFPILS 92
++ AW SA TY + K GG G IR + E N + L + +LE I +
Sbjct: 462 LVSTAWDSARTYRNSDKRGGANGARIRLAPQKDWEGNEPDRLPKVLAVLEGISAATGA-T 520
Query: 93 YADFYQLAGVVAVEV---TGGPEI--PFHPGRPD----KSDPPPEGRL-----PNATKGS 138
AD LAG V VE G EI PF PGR D ++D L AT S
Sbjct: 521 VADVIVLAGNVGVEQKARAAGVEIVLPFAPGRGDATAEQTDTESFAVLEPIHDAIATGSS 580
Query: 139 DHLRDVFGH--------MGLSDKEIVVLSGG-HTLGRCH 168
+R + +GL+ E+ VL GG LG H
Sbjct: 581 RTMRQRLKNCCLIATQLLGLTAPEMTVLIGGLRVLGTNH 619
>pdb|2DV1|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg
pdb|2DV1|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg
Length = 748
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 89/229 (38%), Gaps = 66/229 (28%)
Query: 1 MGKCYPKVSDEYQKAVEK-----CKRKLRGLIAEK---------HCAPIILRLAWHSAGT 46
MGK + Y +A EK KR L L+ H + +R+AWHSAGT
Sbjct: 62 MGKDF-----NYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGT 116
Query: 47 YDVNTKTGGPF-GTIRHPDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVA 104
Y GG G R + N LD A RLL PI+Q++ +S+AD L G VA
Sbjct: 117 YRTADGRGGAGEGQQRFAPLNSWPENANLDKARRLLWPIKQKYGRAISWADLLILTGNVA 176
Query: 105 VEVTGGPEIPFHPGRPDKSDPP-------------------------------------- 126
+E G F GR D +P
Sbjct: 177 LESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGL 236
Query: 127 ----PEG--RLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 168
PEG P+ + +RD F M ++D+E V L +GGHT G+ H
Sbjct: 237 IYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|3N3S|A Chain A, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
pdb|3N3S|B Chain B, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
Length = 748
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 89/229 (38%), Gaps = 66/229 (28%)
Query: 1 MGKCYPKVSDEYQKAVEK-----CKRKLRGLIAEK---------HCAPIILRLAWHSAGT 46
MGK + Y +A EK KR L L+ H + +R+AWHSAGT
Sbjct: 62 MGKDF-----NYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGT 116
Query: 47 YDVNTKTGGPF-GTIRHPDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVA 104
Y GG G R + N LD A RLL PI+Q++ +S+AD L G VA
Sbjct: 117 YRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVA 176
Query: 105 VEVTGGPEIPFHPGRPDKSDPP-------------------------------------- 126
+E G F GR D +P
Sbjct: 177 LESMGFKTFGFAGGRADTWEPADVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGL 236
Query: 127 ----PEG--RLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 168
PEG P+ + +RD F M ++D+E V L +GGHT G+ H
Sbjct: 237 IYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|1MWV|A Chain A, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|1MWV|B Chain B, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|2B2O|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2O|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2Q|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2Q|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2R|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2R|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2S|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
pdb|2B2S|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
Length = 714
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 89/229 (38%), Gaps = 66/229 (28%)
Query: 1 MGKCYPKVSDEYQKAVEK-----CKRKLRGLIAEK---------HCAPIILRLAWHSAGT 46
MGK + Y +A EK KR L L+ H + +R+AWHSAGT
Sbjct: 28 MGKDF-----NYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGT 82
Query: 47 YDVNTKTGGPF-GTIRHPDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVA 104
Y GG G R + N LD A RLL PI+Q++ +S+AD L G VA
Sbjct: 83 YRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVA 142
Query: 105 VEVTGGPEIPFHPGRPDKSDPP-------------------------------------- 126
+E G F GR D +P
Sbjct: 143 LESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGL 202
Query: 127 ----PEG--RLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 168
PEG P+ + +RD F M ++D+E V L +GGHT G+ H
Sbjct: 203 IYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 251
>pdb|3RRW|A Chain A, Crystal Structure Of The Tl29 Protein From Arabidopsis
Thaliana
pdb|3RRW|B Chain B, Crystal Structure Of The Tl29 Protein From Arabidopsis
Thaliana
Length = 268
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 101/258 (39%), Gaps = 78/258 (30%)
Query: 28 AEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIRHPDELAHEANNGLDIAVRLLEPIEQQ 87
A+ P +L+LA + A TYD TK+GG G+IR EL+ N GL + L+E ++++
Sbjct: 27 AKPELVPSLLKLALNDAXTYDKATKSGGANGSIRFSSELSRAENEGLSDGLSLIEEVKKE 86
Query: 88 F-------PILSYADFYQLAGVVAVEVT---------GGPE------------------I 113
PI SYAD QLAG AV+ T GG E
Sbjct: 87 IDSISKGGPI-SYADIIQLAGQSAVKFTYLASAIRKCGGNEEKGNLLYTAYGSAGQWGLF 145
Query: 114 PFHPGRPDKSDPPPEGRLPNATKGS-DHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERS 172
+ GR D ++ PEGR+P K + +D F +GL +++ V S
Sbjct: 146 DRNFGRSDATEADPEGRVPQWGKATVQEXKDKFIAVGLGPRQLAV-------------XS 192
Query: 173 GFEGPWTNNPLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVF- 231
F GP +++ L DP P V+KY + V
Sbjct: 193 AFLGP------------------------DQAATEQLLATDPQVAPWVQKYQRSRETVSQ 228
Query: 232 ----ADYAEAHLKLSELG 245
D A KLS LG
Sbjct: 229 TDYEVDLITAFTKLSCLG 246
>pdb|2FXG|A Chain A, Crystal Structure Of Katg At Ph 4.5
pdb|2FXG|B Chain B, Crystal Structure Of Katg At Ph 4.5
pdb|2FXH|A Chain A, Crystal Structure Of Katg At Ph 6.5
pdb|2FXH|B Chain B, Crystal Structure Of Katg At Ph 6.5
pdb|3N3N|A Chain A, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3N|B Chain B, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3P|A Chain A, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
pdb|3N3P|B Chain B, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
Length = 748
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 89/229 (38%), Gaps = 66/229 (28%)
Query: 1 MGKCYPKVSDEYQKAVEK-----CKRKLRGLIAEK---------HCAPIILRLAWHSAGT 46
MGK + Y +A EK KR L L+ H + +R+AWHSAGT
Sbjct: 62 MGKDF-----NYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGT 116
Query: 47 YDVNTKTGGPF-GTIRHPDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVA 104
Y GG G R + N LD A RLL PI+Q++ +S+AD L G VA
Sbjct: 117 YRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVA 176
Query: 105 VEVTGGPEIPFHPGRPDKSDPP-------------------------------------- 126
+E G F GR D +P
Sbjct: 177 LESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGL 236
Query: 127 ----PEG--RLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 168
PEG P+ + +RD F M ++D+E V L +GGHT G+ H
Sbjct: 237 IYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|3N3Q|A Chain A, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
pdb|3N3Q|B Chain B, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
Length = 748
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 89/229 (38%), Gaps = 66/229 (28%)
Query: 1 MGKCYPKVSDEYQKAVEK-----CKRKLRGLIAEK---------HCAPIILRLAWHSAGT 46
MGK + Y +A EK KR L L+ H + +R+AWHSAGT
Sbjct: 62 MGKDF-----NYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGT 116
Query: 47 YDVNTKTGGPF-GTIRHPDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVA 104
Y GG G R + N LD A RLL PI+Q++ +S+AD L G VA
Sbjct: 117 YRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVA 176
Query: 105 VEVTGGPEIPFHPGRPDKSDPP-------------------------------------- 126
+E G F GR D +P
Sbjct: 177 LESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGL 236
Query: 127 ----PEG--RLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 168
PEG P+ + +RD F M ++D+E V L +GGHT G+ H
Sbjct: 237 IYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|1X7U|A Chain A, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
pdb|1X7U|B Chain B, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
Length = 748
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 89/229 (38%), Gaps = 66/229 (28%)
Query: 1 MGKCYPKVSDEYQKAVEK-----CKRKLRGLIAEK---------HCAPIILRLAWHSAGT 46
MGK + Y +A EK KR L L+ H + +R+AWHSAGT
Sbjct: 62 MGKDF-----NYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGT 116
Query: 47 YDVNTKTGGPF-GTIRHPDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVA 104
Y GG G R + N LD A RLL PI+Q++ +S+AD L G VA
Sbjct: 117 YRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVA 176
Query: 105 VEVTGGPEIPFHPGRPDKSDPP-------------------------------------- 126
+E G F GR D +P
Sbjct: 177 LESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGL 236
Query: 127 ----PEG--RLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 168
PEG P+ + +RD F M ++D+E V L +GGHT G+ H
Sbjct: 237 IYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|3VLH|A Chain A, Crystal Structure Analysis Of The Arg409leu Variants Of
Katg From Haloarcula Marismortui
pdb|3VLH|B Chain B, Crystal Structure Analysis Of The Arg409leu Variants Of
Katg From Haloarcula Marismortui
pdb|3VLI|A Chain A, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Katg From Haloarcula Marismortui
pdb|3VLI|B Chain B, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Katg From Haloarcula Marismortui
pdb|3VLJ|A Chain A, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Complexes With O-Dianisidine In Katg From
Haloarcula Marismortui
pdb|3VLJ|B Chain B, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Complexes With O-Dianisidine In Katg From
Haloarcula Marismortui
Length = 737
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 102/271 (37%), Gaps = 89/271 (32%)
Query: 9 SDEYQKA-VEKCKRKLRGLIAEK---------HCAPIILRLAWHSAGTY-DVNTKTGGPF 57
++E+QK +E K L L+ H P+ +R+AWHSAGTY + + G
Sbjct: 53 AEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADGRGGAAG 112
Query: 58 GTIRHPDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVAVEVTGGPEIPFH 116
G R + N LD A RLL PI+Q++ +S+AD LAG VA+E G +
Sbjct: 113 GRQRFAPINSWPDNANLDKARRLLLPIKQKYGQKISWADLMILAGNVAIESMGFKTFGYA 172
Query: 117 PGRPD--------------------KSDPP------------------PEG--RLPNATK 136
GR D + D P PEG P+
Sbjct: 173 GGREDAFEEDKAVNWGPEDEFETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEA 232
Query: 137 GSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCHKE------------------------- 170
+ ++R F M ++DKE L +GGHT G+ H
Sbjct: 233 SAKNIRQTFDRMAMNDKETAALIAGGHTFGKVHGADDPEENLGPEPEAAPIEQQGLGWQN 292
Query: 171 -----------RSGFEGPWTNNPLIFDNSYF 190
SG EGPWT +P +D Y
Sbjct: 293 KNGNSKGGEMITSGIEGPWTQSPTEWDMGYI 323
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 76/188 (40%), Gaps = 35/188 (18%)
Query: 36 ILRLAWHSAGTYDVNTKTGGPFGT-IRHPDELAHEAN--NGLDIAVRLLEPIEQQF---- 88
+++ AW SA TY + K GG G +R + E N L+ + LE I+ +F
Sbjct: 463 LVKTAWASASTYRDSDKRGGANGARLRLEPQKNWEVNEPEQLETVLGTLENIQTEFNDSR 522
Query: 89 ---PILSYADFYQLAGVVAVEVTGGP-----EIPFHPGR----PDKSDPPPEGRLPNATK 136
+S AD L G AVE EIPF PGR P+ +D P L
Sbjct: 523 SDGTQVSLADLIVLGGNAAVEQAAANAGYDVEIPFEPGRVDAGPEHTDAPSFDALKPKVD 582
Query: 137 G-------------SDHLRDVFGHMGLSDKEIVVLSGG-HTLGRCHKERSGFEGPWTNNP 182
G + L D + L+ E+ L GG ++G +++ G +T+ P
Sbjct: 583 GVRNYIQDDITRPAEEVLVDNADLLNLTASELTALIGGMRSIGANYQDTD--LGVFTDEP 640
Query: 183 LIFDNSYF 190
N +F
Sbjct: 641 ETLTNDFF 648
>pdb|1ITK|A Chain A, Crystal Structure Of Catalase-peroxidase From Haloarcula
Marismortui
pdb|1ITK|B Chain B, Crystal Structure Of Catalase-peroxidase From Haloarcula
Marismortui
Length = 731
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 102/271 (37%), Gaps = 89/271 (32%)
Query: 9 SDEYQKA-VEKCKRKLRGLIAEK---------HCAPIILRLAWHSAGTY-DVNTKTGGPF 57
++E+QK +E K L L+ H P+ +R+AWHSAGTY + + G
Sbjct: 53 AEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADGRGGAAG 112
Query: 58 GTIRHPDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVAVEVTGGPEIPFH 116
G R + N LD A RLL PI+Q++ +S+AD LAG VA+E G +
Sbjct: 113 GRQRFAPINSWPDNANLDKARRLLLPIKQKYGQKISWADLMILAGNVAIESMGFKTFGYA 172
Query: 117 PGRPD--------------------KSDPP------------------PEG--RLPNATK 136
GR D + D P PEG P+
Sbjct: 173 GGREDAFEEDKAVNWGPEDEFETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEA 232
Query: 137 GSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCHKE------------------------- 170
+ ++R F M ++DKE L +GGHT G+ H
Sbjct: 233 SAKNIRQTFDRMAMNDKETAALIAGGHTFGKVHGADDPEENLGPEPEAAPIEQQGLGWQN 292
Query: 171 -----------RSGFEGPWTNNPLIFDNSYF 190
SG EGPWT +P +D Y
Sbjct: 293 KNGNSKGGEMITSGIEGPWTQSPTEWDMGYI 323
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 76/188 (40%), Gaps = 35/188 (18%)
Query: 36 ILRLAWHSAGTYDVNTKTGGPFGT-IRHPDELAHEAN--NGLDIAVRLLEPIEQQF---- 88
+++ AW SA TY + K GG G +R + E N L+ + LE I+ +F
Sbjct: 463 LVKTAWASASTYRDSDKRGGANGARLRLEPQKNWEVNEPEQLETVLGTLENIQTEFNDSR 522
Query: 89 ---PILSYADFYQLAGVVAVEVTGGP-----EIPFHPGR----PDKSDPPPEGRLPNATK 136
+S AD L G AVE EIPF PGR P+ +D P L
Sbjct: 523 SDGTQVSLADLIVLGGNAAVEQAAANAGYDVEIPFEPGRVDAGPEHTDAPSFDALKPKVD 582
Query: 137 G-------------SDHLRDVFGHMGLSDKEIVVLSGG-HTLGRCHKERSGFEGPWTNNP 182
G + L D + L+ E+ L GG ++G +++ G +T+ P
Sbjct: 583 GVRNYIQDDITRPAEEVLVDNADLLNLTASELTALIGGMRSIGANYQDTD--LGVFTDEP 640
Query: 183 LIFDNSYF 190
N +F
Sbjct: 641 ETLTNDFF 648
>pdb|4FEF|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 37 LRLAWHSAGTYDVNTKTGGPFGTIRHPD--ELAHEANNGLDIAVRLLEPIEQQFPILSYA 94
LRL +H A + GG G+I D E AN G+D V +P + I S
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKHNI-SAG 100
Query: 95 DFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDK 153
DF Q AG V V GG IPF GRPD P+ +P D + G G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEGFDSVDSILARMGDAGFSPV 160
Query: 154 EIVVLSGGHTLGRCHKERSGFEG-PWTNNPLIFDNSYF 190
E+V L H++ K G P+ + P +FD+ +F
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPEVFDSQFF 198
>pdb|2W23|A Chain A, Structure Of Mutant W169y Of Pleurotus Eryngii Versatile
Peroxidase (Vp)
Length = 316
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 37 LRLAWHSAGTYDVNTKTGGPFGTIRHPD--ELAHEANNGLDIAVRLLEPIEQQFPILSYA 94
LRL +H A + GG G+I D E AN G+D V +P + I S
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKHNI-SAG 100
Query: 95 DFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDK 153
DF Q AG V V GG IPF GRPD P+ +P D + G G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 154 EIVVLSGGHTLGRCHKERSGFEG-PWTNNPLIFDNSYF 190
E+V L H++ K G P+ + P +FD+ +F
Sbjct: 161 EVVYLLASHSIAAADKVDPSIPGTPFDSTPGVFDSQFF 198
>pdb|3UW8|A Chain A, Crystal Structure Analysis Of The Ser305thr Variants Of
Katg From Haloarcula Marismortui
pdb|3UW8|B Chain B, Crystal Structure Analysis Of The Ser305thr Variants Of
Katg From Haloarcula Marismortui
Length = 737
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 102/271 (37%), Gaps = 89/271 (32%)
Query: 9 SDEYQKA-VEKCKRKLRGLIAEK---------HCAPIILRLAWHSAGTY-DVNTKTGGPF 57
++E+QK +E K L L+ H P+ +R+AWHSAGTY + + G
Sbjct: 53 AEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADGRGGAAG 112
Query: 58 GTIRHPDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVAVEVTGGPEIPFH 116
G R + N LD A RLL PI+Q++ +S+AD LAG VA+E G +
Sbjct: 113 GRQRFAPINSWPDNANLDKARRLLLPIKQKYGQKISWADLMILAGNVAIESMGFKTFGYA 172
Query: 117 PGRPD--------------------KSDPP------------------PEG--RLPNATK 136
GR D + D P PEG P+
Sbjct: 173 GGREDAFEEDKAVNWGPEDEFETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEA 232
Query: 137 GSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCHKE------------------------- 170
+ ++R F M ++DKE L +GGHT G+ H
Sbjct: 233 SAKNIRQTFDRMAMNDKETAALIAGGHTFGKVHGADDPEENLGPEPEAAPIEQQGLGWQN 292
Query: 171 -----------RSGFEGPWTNNPLIFDNSYF 190
+G EGPWT +P +D Y
Sbjct: 293 KNGNSKGGEMITTGIEGPWTQSPTEWDMGYI 323
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 76/188 (40%), Gaps = 35/188 (18%)
Query: 36 ILRLAWHSAGTYDVNTKTGGPFGT-IRHPDELAHEAN--NGLDIAVRLLEPIEQQF---- 88
+++ AW SA TY + K GG G +R + E N L+ + LE I+ +F
Sbjct: 463 LVKTAWASASTYRDSDKRGGANGARLRLEPQKNWEVNEPEQLETVLGTLENIQTEFNDSR 522
Query: 89 ---PILSYADFYQLAGVVAVEVTGGP-----EIPFHPGR----PDKSDPPPEGRLPNATK 136
+S AD L G AVE EIPF PGR P+ +D P L
Sbjct: 523 SDGTQVSLADLIVLGGNAAVEQAAANAGYDVEIPFEPGRVDAGPEHTDAPSFDALKPKVD 582
Query: 137 G-------------SDHLRDVFGHMGLSDKEIVVLSGG-HTLGRCHKERSGFEGPWTNNP 182
G + L D + L+ E+ L GG ++G +++ G +T+ P
Sbjct: 583 GVRNYIQDDITRPAEEVLVDNADLLNLTASELTALIGGMRSIGANYQDTD--LGVFTDEP 640
Query: 183 LIFDNSYF 190
N +F
Sbjct: 641 ETLTNDFF 648
>pdb|3FM1|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 37 LRLAWHSAGTYDVNTKTGGPFGTIRHPD--ELAHEANNGLDIAVRLLEPIEQQFPILSYA 94
LRL +H A + GG G+I D E AN G+D V +P + I S
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKHNI-SAG 100
Query: 95 DFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDK 153
DF Q AG V V GG IPF GRPD P+ +P D + G G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 154 EIVVLSGGHTLGRCHKERSGFEG-PWTNNPLIFDNSYF 190
E+V L H++ K G P+ + P +FD+ +F
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPQVFDSQFF 198
>pdb|3FMU|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 37 LRLAWHSAGTYDVNTKTGGPFGTIRHPD--ELAHEANNGLDIAVRLLEPIEQQFPILSYA 94
LRL +H A + GG G+I D E AN G+D V +P + I S
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKHNI-SAG 100
Query: 95 DFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDK 153
DF Q AG V V GG IPF GRPD P+ +P D + G G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 154 EIVVLSGGHTLGRCHKERSGFEG-PWTNNPLIFDNSYF 190
E+V L H++ K G P+ + P +FD+ +F
Sbjct: 161 EVVSLLASHSIAAADKVDPSIPGTPFDSTPGVFDSQFF 198
>pdb|4FDQ|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 37 LRLAWHSAGTYDVNTKTGGPFGTIRHPD--ELAHEANNGLDIAVRLLEPIEQQFPILSYA 94
LRL +H A + GG G+I D E AN G+D V +P + I S
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKHNI-SAG 100
Query: 95 DFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDK 153
DF Q AG V V GG IPF GRPD P+ +P D + G G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPGPFDSVDSILARMGDAGFSPV 160
Query: 154 EIVVLSGGHTLGRCHKERSGFEG-PWTNNPLIFDNSYF 190
E+V L H++ K G P+ + P +FD+ +F
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPEVFDSQFF 198
>pdb|4G05|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 317
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 37 LRLAWHSAGTYDVNTKTGGPFGTIRHPD--ELAHEANNGLDIAVRLLEPIEQQFPILSYA 94
LRL +H A + GG G+I D E AN G+D V +P + I S
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKHNI-SAG 100
Query: 95 DFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDK 153
DF Q AG V V GG IPF GRPD P+ +P D + G G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPGPFDSVDSILARMGDAGFSPV 160
Query: 154 EIVVLSGGHTLGRCHKERSGFEG-PWTNNPLIFDNSYF 190
E+V L H++ K G P+ + P +FD+ +F
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPEVFDSQFF 198
>pdb|3VLK|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLK|B Chain B, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLL|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui Complexes With
Inhibitor Sha
pdb|3VLL|B Chain B, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui Complexes With
Inhibitor Sha
Length = 737
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 102/271 (37%), Gaps = 89/271 (32%)
Query: 9 SDEYQKA-VEKCKRKLRGLIAEK---------HCAPIILRLAWHSAGTY-DVNTKTGGPF 57
++E+QK +E K L L+ H P+ +R+AWHSAGTY + + G
Sbjct: 53 AEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADGRGGAAG 112
Query: 58 GTIRHPDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVAVEVTGGPEIPFH 116
G R + N LD A RLL PI+Q++ +S+AD LAG VA+E G +
Sbjct: 113 GRQRFAPINSWPDNANLDKARRLLLPIKQKYGQKISWADLMILAGNVAIESMGFKTFGYA 172
Query: 117 PGRPD--------------------KSDPP------------------PEG--RLPNATK 136
GR D + D P PEG P+
Sbjct: 173 GGREDAFEEDKAVNWGPEDEFETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEA 232
Query: 137 GSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCHKE------------------------- 170
+ ++R F M ++DKE L +GGHT G+ H
Sbjct: 233 SAKNIRQTFDRMAMNDKETAALIAGGHTFGKVHGADDPEENLGPEPEAAPIEQQGLGWQN 292
Query: 171 -----------RSGFEGPWTNNPLIFDNSYF 190
+G EGPWT +P +D Y
Sbjct: 293 KNGNSKGGEMITAGIEGPWTQSPTEWDMGYI 323
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 76/188 (40%), Gaps = 35/188 (18%)
Query: 36 ILRLAWHSAGTYDVNTKTGGPFGT-IRHPDELAHEAN--NGLDIAVRLLEPIEQQF---- 88
+++ AW SA TY + K GG G +R + E N L+ + LE I+ +F
Sbjct: 463 LVKTAWASASTYRDSDKRGGANGARLRLEPQKNWEVNEPEQLETVLGTLENIQTEFNDSR 522
Query: 89 ---PILSYADFYQLAGVVAVEVTGGP-----EIPFHPGR----PDKSDPPPEGRLPNATK 136
+S AD L G AVE EIPF PGR P+ +D P L
Sbjct: 523 SDGTQVSLADLIVLGGNAAVEQAAANAGYDVEIPFEPGRVDAGPEHTDAPSFDALKPKVD 582
Query: 137 G-------------SDHLRDVFGHMGLSDKEIVVLSGG-HTLGRCHKERSGFEGPWTNNP 182
G + L D + L+ E+ L GG ++G +++ G +T+ P
Sbjct: 583 GVRNYIQDDITRPAEEVLVDNADLLNLTASELTALIGGMRSIGANYQDTD--LGVFTDEP 640
Query: 183 LIFDNSYF 190
N +F
Sbjct: 641 ETLTNDFF 648
>pdb|3FM6|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 37 LRLAWHSAGTYDVNTKTGGPFGTIRHPD--ELAHEANNGLDIAVRLLEPIEQQFPILSYA 94
LRL +H A + GG G+I D E AN G+D V +P + I S
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKHNI-SAG 100
Query: 95 DFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDK 153
DF Q AG V V GG IPF GRPD P+ +P D + G G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPQDSVDSILARMGDAGFSPV 160
Query: 154 EIVVLSGGHTLGRCHKERSGFEG-PWTNNPLIFDNSYF 190
E+V L H++ K G P+ + P +FD+ +F
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPGVFDSQFF 198
>pdb|2VKA|A Chain A, Site-directed Mutagenesis Of The Catalytic Tryptophan
Environment In Pleurotus Eryngii Versatile Peroxidase
Length = 317
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 37 LRLAWHSAGTYDVNTKTGGPFGTIRHPD--ELAHEANNGLDIAVRLLEPIEQQFPILSYA 94
LRL +H A + GG G+I D E AN G+D V +P + I S
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKHNI-SAG 100
Query: 95 DFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDK 153
DF Q AG V V GG IPF GRPD P+ +P D + G G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 154 EIVVLSGGHTLGRCHKERSGFEG-PWTNNPLIFDNSYF 190
E+V L H++ K G P+ + P +FD+ +F
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPGVFDSQFF 198
>pdb|2BOQ|A Chain A, Crystal Structure Of Versatile Peroxidase
Length = 331
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 37 LRLAWHSAGTYDVNTKTGGPFGTIRHPD--ELAHEANNGLDIAVRLLEPIEQQFPILSYA 94
LRL +H A + GG G+I D E AN G+D V +P + I S
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKHNI-SAG 100
Query: 95 DFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDK 153
DF Q AG V V GG IPF GRPD P+ +P D + G G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 154 EIVVLSGGHTLGRCHKERSGFEG-PWTNNPLIFDNSYF 190
E+V L H++ K G P+ + P +FD+ +F
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPEVFDSQFF 198
>pdb|3FKG|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 37 LRLAWHSAGTYDVNTKTGGPFGTIRHPD--ELAHEANNGLDIAVRLLEPIEQQFPILSYA 94
LRL +H A + GG G+I D E AN G+D V +P + I S
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKHNI-SAG 100
Query: 95 DFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDK 153
DF Q AG V V GG IPF GRPD P+ +P D + G G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 154 EIVVLSGGHTLGRCHKERSGFEG-PWTNNPLIFDNSYF 190
E+V L H++ K G P+ + P +FD+ +F
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPEVFDSQFF 198
>pdb|3FJW|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
pdb|3FJW|B Chain B, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 37 LRLAWHSAGTYDVNTKTGGPFGTIRHPD--ELAHEANNGLDIAVRLLEPIEQQFPILSYA 94
LRL +H A + GG G+I D E AN G+D V +P + I S
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKHNI-SAG 100
Query: 95 DFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDK 153
DF Q AG V V GG IPF GRPD P+ +P D + G G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 154 EIVVLSGGHTLGRCHKERSGFEG-PWTNNPLIFDNSYF 190
E+V L H++ K G P+ + P +FD+ +F
Sbjct: 161 EVVWLLASHSIAAADKVDPSIPGTPFDSTPGVFDSQFF 198
>pdb|3FM4|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 37 LRLAWHSAGTYDVNTKTGGPFGTIRHPD--ELAHEANNGLDIAVRLLEPIEQQFPILSYA 94
LRL +H A + GG G+I D E AN G+D V +P + I S
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKHNI-SAG 100
Query: 95 DFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDK 153
DF Q AG V V GG IPF GRPD P+ +P D + G G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 154 EIVVLSGGHTLGRCHKERSGFEG-PWTNNPLIFDNSYF 190
E+V L H++ K G P+ + P +FD+ +F
Sbjct: 161 EVVWLLASHSIAAAAKVDPSIPGTPFDSTPGVFDSQFF 198
>pdb|2DV2|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
pdb|2DV2|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
Length = 748
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 88/229 (38%), Gaps = 66/229 (28%)
Query: 1 MGKCYPKVSDEYQKAVEK-----CKRKLRGLIAEK---------HCAPIILRLAWHSAGT 46
MGK + Y +A EK KR L L+ H + +R+A HSAGT
Sbjct: 62 MGKDF-----NYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAXHSAGT 116
Query: 47 YDVNTKTGGPF-GTIRHPDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVA 104
Y GG G R + N LD A RLL PI+Q++ +S+AD L G VA
Sbjct: 117 YRTADGRGGAGEGQQRFAPLNSWPENANLDKARRLLWPIKQKYGRAISWADLLILTGNVA 176
Query: 105 VEVTGGPEIPFHPGRPDKSDPP-------------------------------------- 126
+E G F GR D +P
Sbjct: 177 LESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGL 236
Query: 127 ----PEG--RLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 168
PEG P+ + +RD F M ++D+E V L +GGHT G+ H
Sbjct: 237 IYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|3N3R|A Chain A, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
pdb|3N3R|B Chain B, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
Length = 748
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 88/229 (38%), Gaps = 66/229 (28%)
Query: 1 MGKCYPKVSDEYQKAVEK-----CKRKLRGLIAEK---------HCAPIILRLAWHSAGT 46
MGK + Y +A EK KR L L+ H + +R+A HSAGT
Sbjct: 62 MGKDF-----NYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAXHSAGT 116
Query: 47 YDVNTKTGGPF-GTIRHPDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVA 104
Y GG G R + N LD A RLL PI+Q++ +S+AD L G VA
Sbjct: 117 YRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVA 176
Query: 105 VEVTGGPEIPFHPGRPDKSDPP-------------------------------------- 126
+E G F GR D +P
Sbjct: 177 LESMGFKTFGFAGGRADTWEPADVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGL 236
Query: 127 ----PEG--RLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 168
PEG P+ + +RD F M ++D+E V L +GGHT G+ H
Sbjct: 237 IYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|2FXJ|A Chain A, Crystal Structure Of Katg At Ph 8.5
pdb|2FXJ|B Chain B, Crystal Structure Of Katg At Ph 8.5
pdb|3N3O|A Chain A, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
pdb|3N3O|B Chain B, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
Length = 748
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 88/229 (38%), Gaps = 66/229 (28%)
Query: 1 MGKCYPKVSDEYQKAVEK-----CKRKLRGLIAEK---------HCAPIILRLAWHSAGT 46
MGK + Y +A EK KR L L+ H + +R+A HSAGT
Sbjct: 62 MGKDF-----NYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAXHSAGT 116
Query: 47 YDVNTKTGGPF-GTIRHPDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVA 104
Y GG G R + N LD A RLL PI+Q++ +S+AD L G VA
Sbjct: 117 YRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVA 176
Query: 105 VEVTGGPEIPFHPGRPDKSDPP-------------------------------------- 126
+E G F GR D +P
Sbjct: 177 LESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGL 236
Query: 127 ----PEG--RLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 168
PEG P+ + +RD F M ++D+E V L +GGHT G+ H
Sbjct: 237 IYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|3VLM|A Chain A, Crystal Structure Analysis Of The Met244ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLM|B Chain B, Crystal Structure Analysis Of The Met244ala Variant Of
Katg From Haloarcula Marismortui
Length = 737
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 101/271 (37%), Gaps = 89/271 (32%)
Query: 9 SDEYQKA-VEKCKRKLRGLIAEK---------HCAPIILRLAWHSAGTY-DVNTKTGGPF 57
++E+QK +E K L L+ H P+ +R+AWHSAGTY + + G
Sbjct: 53 AEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADGRGGAAG 112
Query: 58 GTIRHPDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVAVEVTGGPEIPFH 116
G R + N LD A RLL PI+Q++ +S+AD LAG VA+E G +
Sbjct: 113 GRQRFAPINSWPDNANLDKARRLLLPIKQKYGQKISWADLMILAGNVAIESMGFKTFGYA 172
Query: 117 PGRPD--------------------KSDPP------------------PEG--RLPNATK 136
GR D + D P PEG P+
Sbjct: 173 GGREDAFEEDKAVNWGPEDEFETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEA 232
Query: 137 GSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCHKE------------------------- 170
+ ++R F ++DKE L +GGHT G+ H
Sbjct: 233 SAKNIRQTFDRAAMNDKETAALIAGGHTFGKVHGADDPEENLGPEPEAAPIEQQGLGWQN 292
Query: 171 -----------RSGFEGPWTNNPLIFDNSYF 190
SG EGPWT +P +D Y
Sbjct: 293 KNGNSKGGEMITSGIEGPWTQSPTEWDMGYI 323
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 76/188 (40%), Gaps = 35/188 (18%)
Query: 36 ILRLAWHSAGTYDVNTKTGGPFGT-IRHPDELAHEAN--NGLDIAVRLLEPIEQQF---- 88
+++ AW SA TY + K GG G +R + E N L+ + LE I+ +F
Sbjct: 463 LVKTAWASASTYRDSDKRGGANGARLRLEPQKNWEVNEPEQLETVLGTLENIQTEFNDSR 522
Query: 89 ---PILSYADFYQLAGVVAVEVTGGP-----EIPFHPGR----PDKSDPPPEGRLPNATK 136
+S AD L G AVE EIPF PGR P+ +D P L
Sbjct: 523 SDGTQVSLADLIVLGGNAAVEQAAANAGYDVEIPFEPGRVDAGPEHTDAPSFDALKPKVD 582
Query: 137 G-------------SDHLRDVFGHMGLSDKEIVVLSGG-HTLGRCHKERSGFEGPWTNNP 182
G + L D + L+ E+ L GG ++G +++ G +T+ P
Sbjct: 583 GVRNYIQDDITRPAEEVLVDNADLLNLTASELTALIGGMRSIGANYQDTD--LGVFTDEP 640
Query: 183 LIFDNSYF 190
N +F
Sbjct: 641 ETLTNDFF 648
>pdb|4FCS|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 68/158 (43%), Gaps = 5/158 (3%)
Query: 37 LRLAWHSAGTYDVNTKTGGPFGTIRHPD--ELAHEANNGLDIAVRLLEPIEQQFPILSYA 94
LRL +H A + GG G+I D E AN G+D V +P + I S
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKHNI-SAG 100
Query: 95 DFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDK 153
DF Q AG V V GG IPF GRPD P+ +P D + G G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPV 160
Query: 154 EIVVLSGGHTLGRCHKERSGFEG-PWTNNPLIFDNSYF 190
E+V L H++ G P+ + P +FD+ +F
Sbjct: 161 EVVWLLASHSIAAADGVDPSIPGTPFDSTPEVFDSQFF 198
>pdb|4FCN|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 319
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 68/158 (43%), Gaps = 5/158 (3%)
Query: 37 LRLAWHSAGTYDVNTKTGGPFGTIRHPD--ELAHEANNGLDIAVRLLEPIEQQFPILSYA 94
LRL +H A + GG G+I D E AN G+D V +P + I S
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKHNI-SAG 100
Query: 95 DFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDK 153
DF Q AG V V GG IPF GRPD P+ +P D + G G S
Sbjct: 101 DFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPGPFDSVDSILARMGDAGFSPV 160
Query: 154 EIVVLSGGHTLGRCHKERSGFEG-PWTNNPLIFDNSYF 190
E+V L H++ G P+ + P +FD+ +F
Sbjct: 161 EVVWLLASHSIAAADGVDPSIPGTPFDSTPEVFDSQFF 198
>pdb|3Q3U|A Chain A, Trametes Cervina Lignin Peroxidase
Length = 338
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 91 LSYADFYQLAGVV-AVEVTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMG 149
+S+ DF Q AG V A GGP + F GR + S P P+G +P+ T +D + +G
Sbjct: 104 VSFGDFVQFAGAVGAANCAGGPRLQFLAGRSNISQPSPDGLVPDPTDSADKILARMADIG 163
Query: 150 LSDKEIVVLSGGHTLGRCHKERSGFEG-PWTNNPLIFDNSYF 190
S E+V L H++ ++ + G P+ + P +FD +F
Sbjct: 164 FSPTEVVHLLASHSIAAQYEVDTDVAGSPFDSTPSVFDTQFF 205
>pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q,
D179n
Length = 357
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 69 EANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPP 127
ANNG+D +V L P Q+ +S AD Q AG VA+ G P + F GRP+K+
Sbjct: 78 SANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAV 137
Query: 128 EGRLPNATKGSDHLRDVFGHM-GLSDKEIVVLSGGHTLGRCHKERSGFE-GPWTNNPLIF 185
+G +P + F G + E+V L H++ R +K + P+ + P F
Sbjct: 138 DGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARANKVDQTIDAAPFDSTPFTF 197
Query: 186 DNSYF 190
D F
Sbjct: 198 DTQVF 202
>pdb|1MN1|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant D179n
Length = 357
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 69 EANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPP 127
ANNG+D +V L P Q+ +S AD Q AG VA+ G P + F GRP+K+
Sbjct: 78 SANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAV 137
Query: 128 EGRLPNATKGSDHLRDVFGHM-GLSDKEIVVLSGGHTLGRCHKERSGFE-GPWTNNPLIF 185
+G +P + F G + E+V L H++ R +K + P+ + P F
Sbjct: 138 DGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARANKVDQTIDAAPFDSTPFTF 197
Query: 186 DNSYF 190
D F
Sbjct: 198 DTQVF 202
>pdb|1YYD|A Chain A, High Resolution Crystal Structure Of Manganese Peroxidase
pdb|1YYG|A Chain A, Manganese Peroxidase Complexed With Cd(Ii) Inhibitor
pdb|1YZP|A Chain A, Substrate-free Manganese Peroxidase
pdb|1YZR|A Chain A, Manganese Peroxidase-Sm(Iii) Complex
pdb|1MNP|A Chain A, Manganese Peroxidase
pdb|3M5Q|A Chain A, 0.93 A Structure Of Manganese-Bound Manganese Peroxidase
pdb|3M8M|A Chain A, 1.05 A Structure Of Manganese-Free Manganese Peroxidase
Length = 357
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 69 EANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVE-VTGGPEIPFHPGRPDKSDPPP 127
ANNG+D +V L P Q+ +S AD Q AG VA+ G P + F GRP+K+
Sbjct: 78 SANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAV 137
Query: 128 EGRLPNATKGSDHLRDVFGHM-GLSDKEIVVLSGGHTLGRCHKERSGFE-GPWTNNPLIF 185
+G +P + F G + E+V L H++ R K + P+ + P F
Sbjct: 138 DGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARADKVDQTIDAAPFDSTPFTF 197
Query: 186 DNSYF 190
D F
Sbjct: 198 DTQVF 202
>pdb|2CCA|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
pdb|2CCA|B Chain B, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
Length = 740
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 91/237 (38%), Gaps = 77/237 (32%)
Query: 31 HCAPIILRLAWHSAGTYDVNTKTGGPFGTIRHPDELAHEANNG-LDIAVRLLEPIEQQF- 88
H P+ +R+AWH+AGTY ++ GG G ++ L +N LD A RLL P+++++
Sbjct: 97 HYGPLFIRMAWHAAGTYRIHDGRGGAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYG 156
Query: 89 PILSYADFYQLAGVVAV---------------------EVTGGPEIPF-----HPGRPDK 122
LS+AD AG A+ EV G E + + G+ D
Sbjct: 157 KKLSWADLIVFAGNCALESMGFKTFGFGFGRVDQWEPDEVYWGKEATWLGDERYSGKRDL 216
Query: 123 SDP-----------PPEG--RLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 168
+P PEG P+ + +R+ F M ++D E L GGHT G+ H
Sbjct: 217 ENPLAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTH 276
Query: 169 KE-----------------------------------RSGFEGPWTNNPLIFDNSYF 190
SG E WTN P +DNS+
Sbjct: 277 GAGPADLVGPEPEAAPLEQMGLGWKSSYGTGTGKDAITSGIEVVWTNTPTKWDNSFL 333
>pdb|1SJ2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
Catalase-Peroxidase
pdb|1SJ2|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
Catalase-Peroxidase
Length = 743
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 91/237 (38%), Gaps = 77/237 (32%)
Query: 31 HCAPIILRLAWHSAGTYDVNTKTGGPFGTIRHPDELAHEANNG-LDIAVRLLEPIEQQF- 88
H P+ +R+AWH+AGTY ++ GG G ++ L +N LD A RLL P+++++
Sbjct: 100 HYGPLFIRMAWHAAGTYRIHDGRGGAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYG 159
Query: 89 PILSYADFYQLAGVVAV---------------------EVTGGPEIPF-----HPGRPDK 122
LS+AD AG A+ EV G E + + G+ D
Sbjct: 160 KKLSWADLIVFAGNCALESMGFKTFGFGFGRVDQWEPDEVYWGKEATWLGDERYSGKRDL 219
Query: 123 SDP-----------PPEG--RLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 168
+P PEG P+ + +R+ F M ++D E L GGHT G+ H
Sbjct: 220 ENPLAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTH 279
Query: 169 KE-----------------------------------RSGFEGPWTNNPLIFDNSYF 190
SG E WTN P +DNS+
Sbjct: 280 GAGPADLVGPEPEAAPLEQMGLGWKSSYGTGTGKDAITSGIEVVWTNTPTKWDNSFL 336
>pdb|2CCD|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
pdb|2CCD|B Chain B, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
Length = 740
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 91/237 (38%), Gaps = 77/237 (32%)
Query: 31 HCAPIILRLAWHSAGTYDVNTKTGGPFGTIRHPDELAHEANNG-LDIAVRLLEPIEQQF- 88
H P+ +R+AWH+AGTY ++ GG G ++ L +N LD A RLL P+++++
Sbjct: 97 HYGPLFIRMAWHAAGTYRIHDGRGGAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYG 156
Query: 89 PILSYADFYQLAGVVAV---------------------EVTGGPEIPF-----HPGRPDK 122
LS+AD AG A+ EV G E + + G+ D
Sbjct: 157 KKLSWADLIVFAGNCALESMGFKTFGFGFGRVDQWEPDEVYWGKEATWLGDERYSGKRDL 216
Query: 123 SDP-----------PPEG--RLPNATKGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 168
+P PEG P+ + +R+ F M ++D E L GGHT G+ H
Sbjct: 217 ENPLAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTH 276
Query: 169 KE-----------------------------------RSGFEGPWTNNPLIFDNSYF 190
+G E WTN P +DNS+
Sbjct: 277 GAGPADLVGPEPEAAPLEQMGLGWKSSYGTGTGKDAITTGIEVVWTNTPTKWDNSFL 333
>pdb|1B85|A Chain A, Lignin Peroxidase
pdb|1B85|B Chain B, Lignin Peroxidase
Length = 351
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 65 ELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVE-VTGGPEIPFHPGRPDKS 123
E A N GLD V+L +P Q+ + + DF AG VA+ G P++ F GR +
Sbjct: 85 ETAFHPNIGLDEIVKLQKPFVQKHGV-TPGDFIAFAGAVALSNCPGAPQMNFFTGRAPAT 143
Query: 124 DPPPEGRLPNATKGSDHLRDVFGHMGLSDK-EIVVLSGGHTLGRCHKERSGFEG-PWTNN 181
P P+G +P D + + G D+ E+V + H++ + +G P+ +
Sbjct: 144 QPAPDGLVPEPFHTVDQIINRVNDAGEFDELELVFMLSAHSVAAVNDVDPTVQGLPFDST 203
Query: 182 PLIFDNSYF 190
P IFD+ +F
Sbjct: 204 PGIFDSQFF 212
>pdb|3UT2|A Chain A, Crystal Structure Of Fungal Magkatg2
pdb|3UT2|B Chain B, Crystal Structure Of Fungal Magkatg2
Length = 764
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 84/222 (37%), Gaps = 78/222 (35%)
Query: 17 EKCKRKLRGLIAEK---------HCAPIILRLAWHSAGTYDV------NTKTGGPFGTIR 61
E K+ + L+ E + + +R+A HSAGTY F +
Sbjct: 85 EAVKKDIAALMTESQDWWPADFGNYGGLFVRMAXHSAGTYRAMDGRGGGGMGQQRFAPLN 144
Query: 62 H-PDELAHEANNGLDIAVRLLEPIEQQF-PILSYADFYQLAGVVAVEVTG---------- 109
PD N LD A RL+ PI+Q++ +S+AD L G VA+E G
Sbjct: 145 SWPD------NQNLDKARRLIWPIKQKYGNKISWADLMLLTGNVALENMGFKTLGFGGGR 198
Query: 110 ------------GPEIPFHP--------------GRPDKSDPP------------PEGRL 131
G E F P R DK + P PEG
Sbjct: 199 ADTWQSDEAVYWGAETTFVPQGNDVRYNNSVDINARADKLEKPLAATHMGLIYVNPEG-- 256
Query: 132 PNAT----KGSDHLRDVFGHMGLSDKEIVVL-SGGHTLGRCH 168
PN T + +R+ FG MG++D E V L +GGH G+ H
Sbjct: 257 PNGTPDPAASAKDIREAFGRMGMNDTETVALIAGGHAFGKTH 298
>pdb|1B80|A Chain A, Rec. Lignin Peroxidase H8 Oxidatively Processed
pdb|1B80|B Chain B, Rec. Lignin Peroxidase H8 Oxidatively Processed
Length = 351
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 65 ELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVE-VTGGPEIPFHPGRPDKS 123
E A N GLD V+L +P Q+ + + DF AG VA+ G P++ F GR +
Sbjct: 85 ETAFHPNIGLDEIVKLQKPFVQKHGV-TPGDFIAFAGAVALSNCPGAPQMNFFTGRAPAT 143
Query: 124 DPPPEGRLPNATKGSDHLRDVFGHMGLSDK-EIVVLSGGHTLGRCHKERSGFEG-PWTNN 181
P P+G +P D + + G D+ E+V + H++ + +G P+ +
Sbjct: 144 QPAPDGLVPEPFHTVDQIINRVNDAGEFDELELVXMLSAHSVAAVNDVDPTVQGLPFDST 203
Query: 182 PLIFDNSYF 190
P IFD+ +F
Sbjct: 204 PGIFDSQFF 212
>pdb|1B82|A Chain A, Pristine Recomb. Lignin Peroxidase H8
pdb|1B82|B Chain B, Pristine Recomb. Lignin Peroxidase H8
Length = 351
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 65 ELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVE-VTGGPEIPFHPGRPDKS 123
E A N GLD V+L +P Q+ + + DF AG VA+ G P++ F GR +
Sbjct: 85 ETAFHPNIGLDEIVKLQKPFVQKHGV-TPGDFIAFAGAVALSNCPGAPQMNFFTGRAPAT 143
Query: 124 DPPPEGRLPNATKGSDHLRDVFGHMGLSDK-EIVVLSGGHTLGRCHKERSGFEG-PWTNN 181
P P+G +P D + + G D+ E+V + H++ + +G P+ +
Sbjct: 144 QPAPDGLVPEPFHTVDQIINRVNDAGEFDELELVWMLSAHSVAAVNDVDPTVQGLPFDST 203
Query: 182 PLIFDNSYF 190
P IFD+ +F
Sbjct: 204 PGIFDSQFF 212
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPPPEG-- 129
G ++ + +E P ++S D LA +V ++GGP GR D G
Sbjct: 78 GFNVVDNIKTALENACPGVVSCTDVLALASQASVSLSGGPSWTVDLGRRDTLTANQAGAN 137
Query: 130 -RLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGR 166
+P+ T+G ++ F +GL+ ++V LSG HT GR
Sbjct: 138 SSIPSPTQGLSNITSKFSAVGLNTNDLVALSGAHTFGR 175
>pdb|1LGA|A Chain A, Crystallographic Refinement Of Lignin Peroxidase At 2
Angstroms
pdb|1LGA|B Chain B, Crystallographic Refinement Of Lignin Peroxidase At 2
Angstroms
pdb|1LLP|A Chain A, Lignin Peroxidase (isozyme H2) Pi 4.15
Length = 343
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 65 ELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVE-VTGGPEIPFHPGRPDKS 123
E A N GLD V + +P Q+ + + DF AG VA+ G P++ F GR +
Sbjct: 78 ETAFHPNIGLDEVVAMQKPFVQKHGV-TPGDFIAFAGAVALSNCPGAPQMNFFTGRKPAT 136
Query: 124 DPPPEGRLPNATKGSDHLRDVFGHMGLSDK-EIVVLSGGHTLGRCHKERSGFEG-PWTNN 181
P P+G +P D + G D+ E+V + H++ + +G P+ +
Sbjct: 137 QPAPDGLVPEPFHTVDQIIARVNDAGEFDELELVWMLSAHSVAAVNDVDPTVQGLPFDST 196
Query: 182 PLIFDNSYF 190
P IFD+ +F
Sbjct: 197 PGIFDSQFF 205
>pdb|1LY8|A Chain A, The Crystal Structure Of A Mutant Enzyme Of Coprinus
Cinereus Peroxidase Provides An Understanding Of Its
Increased Thermostability And Insight Into Modelling Of
Protein Structures
pdb|1LY8|B Chain B, The Crystal Structure Of A Mutant Enzyme Of Coprinus
Cinereus Peroxidase Provides An Understanding Of Its
Increased Thermostability And Insight Into Modelling Of
Protein Structures
Length = 343
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 3/128 (2%)
Query: 65 ELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVE-VTGGPEIPFHPGRPDKS 123
ELA AN GL V L + + S+ D Q A V + G P + F GR + S
Sbjct: 86 ELAFPANGGLTDTVEALRAVGINHGV-SFGDLIQFAAAVGMSNCPGSPRLEFLTGRSNSS 144
Query: 124 DPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSG-FEGPWTNNP 182
P P +P + D FG G S E+V L H+L S F P + P
Sbjct: 145 QPSPPSLIPGPGNTVTAILDRFGDAGFSPDEVVDLLAAHSLASQEGLNSAIFRSPLDSTP 204
Query: 183 LIFDNSYF 190
+FD ++
Sbjct: 205 QVFDTQFY 212
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDK---SDPPPE 128
GLD+ + +E P +S AD +A +A + GGP P GR D +
Sbjct: 76 GLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLAN 135
Query: 129 GRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGR 166
LP L+ F GL+ ++V LSGGHT GR
Sbjct: 136 QNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGR 173
>pdb|1QPA|A Chain A, Lignin Peroxidase Isozyme Lip4.65 (Pi 4.65)
pdb|1QPA|B Chain B, Lignin Peroxidase Isozyme Lip4.65 (Pi 4.65)
Length = 345
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 65 ELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVE-VTGGPEIPFHPGRPDKS 123
E + N GLD V + +P + + + DF AG V V G P++ F GRP+ +
Sbjct: 79 ETTYHPNIGLDEVVAIQKPFIAKHGV-TPGDFIAFAGAVGVSNCPGAPQMQFFLGRPEAT 137
Query: 124 DPPPEGRLPNATKGSDH-LRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEG-PWTNN 181
P+G +P D L + G + E V L H++ + G P+ +
Sbjct: 138 QAAPDGLVPEPFHTIDQVLARMLDAGGFDEIETVXLLSAHSIAAANDVDPTISGLPFDST 197
Query: 182 PLIFDNSYF 190
P FD+ +F
Sbjct: 198 PGQFDSQFF 206
>pdb|1LY9|A Chain A, The Impact Of The Physical And Chemical Environment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LY9|B Chain B, The Impact Of The Physical And Chemical Environment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYC|A Chain A, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYC|B Chain B, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
Length = 343
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 51/128 (39%), Gaps = 3/128 (2%)
Query: 65 ELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVE-VTGGPEIPFHPGRPDKS 123
ELA AN GL V L + + S+ D Q A V + G P + F GR S
Sbjct: 86 ELAFPANGGLTDTVEALRAVGINHGV-SFGDLIQFATAVGMSNCPGSPRLEFLTGRSSSS 144
Query: 124 DPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSG-FEGPWTNNP 182
P P +P + D G G S E+V L H+L S F P + P
Sbjct: 145 QPSPPSLIPGPGNTVTAILDRMGDAGFSPDEVVDLLAAHSLASQEGLNSAIFRSPLDSTP 204
Query: 183 LIFDNSYF 190
+FD ++
Sbjct: 205 QVFDTQFY 212
>pdb|1LYK|A Chain A, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYK|B Chain B, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
Length = 343
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 52/128 (40%), Gaps = 3/128 (2%)
Query: 65 ELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVE-VTGGPEIPFHPGRPDKS 123
ELA AN GL V L + + S+ D Q A V + G P + F GR + S
Sbjct: 86 ELAFPANGGLTDTVEALRAVGINHGV-SFGDLIQFATAVGMSNCPGSPRLEFLTGRSNSS 144
Query: 124 DPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSG-FEGPWTNNP 182
P P +P + D G G S E+V L H+L S F P + P
Sbjct: 145 QPSPPSLIPGPGNTVTAILDRMGDAGFSPDEVVDLLAAHSLASQEGLNSAIFRSPLDSTP 204
Query: 183 LIFDNSYF 190
+FD ++
Sbjct: 205 QVFDTQFY 212
>pdb|1CK6|A Chain A, Binding Mode Of Salicylhydroxamic Acid To Arthromyces
Ramosus Peroxidase
pdb|1C8I|A Chain A, Binding Mode Of Hydroxylamine To Arthromyces Ramosus
Peroxidase
pdb|1ARP|A Chain A, Crystal Structure Of The Fungal Peroxidase From
Arthromyces Ramosus At 1.9 Angstroms Resolution:
Structural Comparisons With The Lignin And Cytochrome C
Peroxidases
pdb|1ARU|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARV|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARW|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARX|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARY|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1GZA|A Chain A, Peroxidase
pdb|1GZB|A Chain A, Peroxidase
pdb|1HSR|A Chain A, Binding Mode Of Benzhydroxamic Acid To Arthromyces Ramosus
Peroxidase
pdb|2E3B|A Chain A, Crystal Structure Of The Ha-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
pdb|2E3A|A Chain A, Crystal Structure Of The No-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
pdb|2E39|A Chain A, Crystal Structure Of The Cn-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
Length = 344
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 3/128 (2%)
Query: 65 ELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVE-VTGGPEIPFHPGRPDKS 123
ELA AN GL + L + + S+ D Q A V + G P + F GR + S
Sbjct: 87 ELAFPANGGLTDTIEALRAVGINHGV-SFGDLIQFATAVGMSNCPGSPRLEFLTGRSNSS 145
Query: 124 DPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSG-FEGPWTNNP 182
P P +P + D G G S E+V L H+L S F P + P
Sbjct: 146 QPSPPSLIPGPGNTVTAILDRMGDAGFSPDEVVDLLAAHSLASQEGLNSAIFRSPLDSTP 205
Query: 183 LIFDNSYF 190
+FD ++
Sbjct: 206 QVFDTQFY 213
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPPPEG-- 129
G ++ + +E P ++S +D LA +V + GGP GR D G
Sbjct: 77 GFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGAN 136
Query: 130 -RLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGR 166
+P+ + ++ F +GL+ ++V LSG HT GR
Sbjct: 137 SSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGR 174
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 75/223 (33%), Gaps = 62/223 (27%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSD------- 124
G + R+ +E P +S AD +A +V + GGP GR D
Sbjct: 77 GFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLAN 136
Query: 125 ---PPPEGRLPNATKGSDHLRDVFGHMGLS-DKEIVVLSGGHTLGR--CHK--------E 170
P P LP L+D F ++GL+ ++V LSGGHT G+ C
Sbjct: 137 ANLPAPFFTLP-------QLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRSIMDRLYNFS 189
Query: 171 RSGFEGPWTN--------------------------NPLIFDNSYFXXXXXXXXXXXXXX 204
+G P N P IFDN Y+
Sbjct: 190 NTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQ--- 246
Query: 205 PSDKALLEDPVFR---PLVEKYAADEDAVFADYAEAHLKLSEL 244
SD+ L P PLV +A F + EA ++ +
Sbjct: 247 -SDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 74/216 (34%), Gaps = 48/216 (22%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDP---PPE 128
G + R+ +E P +S AD +A +V + GGP GR D
Sbjct: 77 GFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLAN 136
Query: 129 GRLPNATKGSDHLRDVFGHMGLS-DKEIVVLSGGHTLGR--C--------HKERSGFEGP 177
LP L+D F ++GL+ ++V LSGGHT G+ C + +G P
Sbjct: 137 ANLPQPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDP 196
Query: 178 WTN--------------------------NPLIFDNSYFXXXXXXXXXXXXXXPSDKALL 211
N P IFDN Y+ SD+ L
Sbjct: 197 TLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQ----SDQELF 252
Query: 212 EDPVFR---PLVEKYAADEDAVFADYAEAHLKLSEL 244
P PLV +A F + EA ++ +
Sbjct: 253 SSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 76/223 (34%), Gaps = 62/223 (27%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSD------- 124
G + R+ +E P +S AD +A +V + GGP GR D
Sbjct: 76 GFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLAN 135
Query: 125 ---PPPEGRLPNATKGSDHLRDVFGHMGLS-DKEIVVLSGGHTLGR--C--------HKE 170
P P LP L+D F ++GL+ ++V LSGGHT G+ C +
Sbjct: 136 ANLPAPFFTLP-------QLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFS 188
Query: 171 RSGFEGPWTN--------------------------NPLIFDNSYFXXXXXXXXXXXXXX 204
+G P N P IFDN Y+
Sbjct: 189 NTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQ--- 245
Query: 205 PSDKALLEDPVFR---PLVEKYAADEDAVFADYAEAHLKLSEL 244
SD+ L P PLV +A F + EA ++ +
Sbjct: 246 -SDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 76/223 (34%), Gaps = 62/223 (27%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSD------- 124
G + R+ +E P +S AD +A +V + GGP GR D
Sbjct: 77 GFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLAN 136
Query: 125 ---PPPEGRLPNATKGSDHLRDVFGHMGLS-DKEIVVLSGGHTLGR--C--------HKE 170
P P LP L+D F ++GL+ ++V LSGGHT G+ C +
Sbjct: 137 ANLPAPFFTLP-------QLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFS 189
Query: 171 RSGFEGPWTN--------------------------NPLIFDNSYFXXXXXXXXXXXXXX 204
+G P N P IFDN Y+
Sbjct: 190 NTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQ--- 246
Query: 205 PSDKALLEDPVFR---PLVEKYAADEDAVFADYAEAHLKLSEL 244
SD+ L P PLV +A F + EA ++ +
Sbjct: 247 -SDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 76/223 (34%), Gaps = 62/223 (27%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSD------- 124
G + R+ +E P +S AD +A +V + GGP GR D
Sbjct: 76 GFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLAN 135
Query: 125 ---PPPEGRLPNATKGSDHLRDVFGHMGLS-DKEIVVLSGGHTLGR--C--------HKE 170
P P LP L+D F ++GL+ ++V LSGGHT G+ C +
Sbjct: 136 ANLPAPFFTLP-------QLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFS 188
Query: 171 RSGFEGPWTN--------------------------NPLIFDNSYFXXXXXXXXXXXXXX 204
+G P N P IFDN Y+
Sbjct: 189 NTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQ--- 245
Query: 205 PSDKALLEDPVFR---PLVEKYAADEDAVFADYAEAHLKLSEL 244
SD+ L P PLV +A F + EA ++ +
Sbjct: 246 -SDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 76/223 (34%), Gaps = 62/223 (27%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSD------- 124
G + R+ +E P +S AD +A +V + GGP GR D
Sbjct: 77 GFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLAN 136
Query: 125 ---PPPEGRLPNATKGSDHLRDVFGHMGLS-DKEIVVLSGGHTLGR--C--------HKE 170
P P LP L+D F ++GL+ ++V LSGGHT G+ C +
Sbjct: 137 ANLPAPFFTLP-------QLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFS 189
Query: 171 RSGFEGPWTN--------------------------NPLIFDNSYFXXXXXXXXXXXXXX 204
+G P N P IFDN Y+
Sbjct: 190 NTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDMDLRTPTIFDNKYYVNLEEQKGLIQ--- 246
Query: 205 PSDKALLEDPVFR---PLVEKYAADEDAVFADYAEAHLKLSEL 244
SD+ L P PLV +A F + EA ++ +
Sbjct: 247 -SDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 76/223 (34%), Gaps = 62/223 (27%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSD------- 124
G + R+ +E P +S AD +A +V + GGP GR D
Sbjct: 76 GFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLAN 135
Query: 125 ---PPPEGRLPNATKGSDHLRDVFGHMGLS-DKEIVVLSGGHTLGR--C--------HKE 170
P P LP L+D F ++GL+ ++V LSGGHT G+ C +
Sbjct: 136 ANLPAPFFTLP-------QLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFS 188
Query: 171 RSGFEGPWTN--------------------------NPLIFDNSYFXXXXXXXXXXXXXX 204
+G P N P IFDN Y+
Sbjct: 189 NTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQ--- 245
Query: 205 PSDKALLEDPVFR---PLVEKYAADEDAVFADYAEAHLKLSEL 244
SD+ L P PLV +A F + EA ++ +
Sbjct: 246 -SDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 76/223 (34%), Gaps = 62/223 (27%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSD------- 124
G + R+ +E P +S AD +A +V + GGP GR D
Sbjct: 77 GFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLAN 136
Query: 125 ---PPPEGRLPNATKGSDHLRDVFGHMGLS-DKEIVVLSGGHTLGR--C--------HKE 170
P P LP L+D F ++GL+ ++V LSGGHT G+ C +
Sbjct: 137 ANLPAPFFTLP-------QLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFS 189
Query: 171 RSGFEGPWTN--------------------------NPLIFDNSYFXXXXXXXXXXXXXX 204
+G P N P IFDN Y+
Sbjct: 190 NTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQ--- 246
Query: 205 PSDKALLEDPVFR---PLVEKYAADEDAVFADYAEAHLKLSEL 244
SD+ L P PLV +A F + EA ++ +
Sbjct: 247 -SDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
>pdb|1U2K|A Chain A, Crystal Structure Of The C-Terminal Domain From The
Catalase- Peroxidase Katg Of Escherichia Coli (I41)
pdb|1U2L|A Chain A, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P1)
pdb|1U2L|B Chain B, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P1)
Length = 309
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 75/184 (40%), Gaps = 36/184 (19%)
Query: 36 ILRLAWHSAGTYDVNTKTGGPFGTIRHPDELAHEANNGLDI---AVR---LLEPIEQQFP 89
++ +AW SA T+ K GG G LA D+ AVR +LE I+++
Sbjct: 50 LVSVAWASASTFRGGDKRGGANGA-----RLALMPQRDWDVNAAAVRALPVLEKIQKESG 104
Query: 90 ILSYADFYQLAGVVAVEVTGGPE-----IPFHPGRPDKS------------DPPPEG--- 129
S AD LAGVV VE +PF PGR D +P +G
Sbjct: 105 KASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDIEMFELLEPIADGFRN 164
Query: 130 ---RLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFD 186
RL +T S L D + L+ E+ L GG + + + S G +T+ +
Sbjct: 165 YRARLDVSTTES-LLIDKAQQLTLTAPEMTALVGGMRVLGANFDGSK-NGVFTDRVGVLS 222
Query: 187 NSYF 190
N +F
Sbjct: 223 NDFF 226
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 74/216 (34%), Gaps = 48/216 (22%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDP---PPE 128
G + R+ +E P +S AD +A +V + GGP GR D
Sbjct: 77 GFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLAN 136
Query: 129 GRLPNATKGSDHLRDVFGHMGLS-DKEIVVLSGGHTLGR--C--------HKERSGFEGP 177
LP L+D F ++GL+ ++V LSGGHT G+ C + +G P
Sbjct: 137 ANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDP 196
Query: 178 WTN--------------------------NPLIFDNSYFXXXXXXXXXXXXXXPSDKALL 211
N P IFDN Y+ SD+ L
Sbjct: 197 TLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQ----SDQELF 252
Query: 212 EDPVFR---PLVEKYAADEDAVFADYAEAHLKLSEL 244
P PLV +A F + EA ++ +
Sbjct: 253 SSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
>pdb|1U2J|A Chain A, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
pdb|1U2J|B Chain B, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
pdb|1U2J|C Chain C, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
pdb|1U2J|D Chain D, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
pdb|1U2J|E Chain E, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
pdb|1U2J|F Chain F, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
pdb|1U2J|G Chain G, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
pdb|1U2J|H Chain H, Crystal Structure Of The C-Terminal Domain From The
Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21)
Length = 326
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 75/184 (40%), Gaps = 36/184 (19%)
Query: 36 ILRLAWHSAGTYDVNTKTGGPFGTIRHPDELAHEANNGLDI---AVR---LLEPIEQQFP 89
++ +AW SA T+ K GG G LA D+ AVR +LE I+++
Sbjct: 67 LVSVAWASASTFRGGDKRGGANGA-----RLALMPQRDWDVNAAAVRALPVLEKIQKESG 121
Query: 90 ILSYADFYQLAGVVAVEVTGGPE-----IPFHPGRPDKS------------DPPPEG--- 129
S AD LAGVV VE +PF PGR D +P +G
Sbjct: 122 KASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDIEMFELLEPIADGFRN 181
Query: 130 ---RLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFD 186
RL +T S L D + L+ E+ L GG + + + S G +T+ +
Sbjct: 182 YRARLDVSTTES-LLIDKAQQLTLTAPEMTALVGGMRVLGANFDGSK-NGVFTDRVGVLS 239
Query: 187 NSYF 190
N +F
Sbjct: 240 NDFF 243
>pdb|1H3J|A Chain A, Structure Of Recombinant Coprinus Cinereus Peroxidase
Determined To 2.0 A
pdb|1H3J|B Chain B, Structure Of Recombinant Coprinus Cinereus Peroxidase
Determined To 2.0 A
Length = 342
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 3/128 (2%)
Query: 65 ELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVE-VTGGPEIPFHPGRPDKS 123
ELA AN GL V L + + S+ D Q A V + G P + F GR + S
Sbjct: 85 ELAFPANGGLTDTVEALRAVGINHGV-SFGDLIQFATAVGMSNCPGSPRLEFLTGRSNSS 143
Query: 124 DPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSG-FEGPWTNNP 182
P P +P + D G G S E+V L +L S F P + P
Sbjct: 144 QPSPPSLIPGPGNTVTAILDRMGDAGFSPDEVVDLLAAXSLASQEGLNSAIFRSPLDSTP 203
Query: 183 LIFDNSYF 190
+FD ++
Sbjct: 204 QVFDTQFY 211
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 76/223 (34%), Gaps = 62/223 (27%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSD------- 124
G + R+ +E P +S AD +A +V + GGP GR D
Sbjct: 76 GFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLAN 135
Query: 125 ---PPPEGRLPNATKGSDHLRDVFGHMGLS-DKEIVVLSGGHTLGR--C--------HKE 170
P P LP L+D F ++GL+ ++V LSGGHT G+ C +
Sbjct: 136 ANLPAPFFTLP-------QLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFS 188
Query: 171 RSGFEGPWTN--------------------------NPLIFDNSYFXXXXXXXXXXXXXX 204
+G P N P IFDN Y+
Sbjct: 189 NTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQ--- 245
Query: 205 PSDKALLEDPVFR---PLVEKYAADEDAVFADYAEAHLKLSEL 244
SD+ L P PLV +A F + EA ++ +
Sbjct: 246 -SDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 76/223 (34%), Gaps = 62/223 (27%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSD------- 124
G + R+ +E P +S AD +A +V + GGP GR D
Sbjct: 76 GFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLAN 135
Query: 125 ---PPPEGRLPNATKGSDHLRDVFGHMGLS-DKEIVVLSGGHTLGR--C--------HKE 170
P P LP L+D F ++GL+ ++V LSGGH+ G+ C +
Sbjct: 136 ANLPAPFFTLP-------QLKDSFRNVGLNRSSDLVALSGGHSFGKNQCRFIMDRLYNFS 188
Query: 171 RSGFEGPWTN--------------------------NPLIFDNSYFXXXXXXXXXXXXXX 204
+G P N P IFDN Y+
Sbjct: 189 NTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQ--- 245
Query: 205 PSDKALLEDPVFR---PLVEKYAADEDAVFADYAEAHLKLSEL 244
SD+ L P PLV +A F + EA ++ +
Sbjct: 246 -SDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 75/223 (33%), Gaps = 62/223 (27%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSD------- 124
G + R+ +E P +S AD +A +V + GGP GR D
Sbjct: 76 GFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLAN 135
Query: 125 ---PPPEGRLPNATKGSDHLRDVFGHMGLS-DKEIVVLSGGHTLGR--C--------HKE 170
P P LP L+D F ++GL+ ++V L GGHT G+ C +
Sbjct: 136 ANLPAPFFTLP-------QLKDSFRNVGLNRSSDLVALYGGHTFGKNQCRFIMDRLYNFS 188
Query: 171 RSGFEGPWTN--------------------------NPLIFDNSYFXXXXXXXXXXXXXX 204
+G P N P IFDN Y+
Sbjct: 189 NTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQ--- 245
Query: 205 PSDKALLEDPVFR---PLVEKYAADEDAVFADYAEAHLKLSEL 244
SD+ L P PLV +A F + EA ++ +
Sbjct: 246 -SDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 72/191 (37%), Gaps = 42/191 (21%)
Query: 90 ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDK----SDPPPEGRLPNATKGSDHLRDVF 145
++S +D LA +V V+GGP+ GR D S LP + L +
Sbjct: 103 VVSCSDILALAARDSVVVSGGPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALL 162
Query: 146 GHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPW--------------------------- 178
G +GL ++V +SGGHT+G H S FE
Sbjct: 163 GRLGLDATDLVTISGGHTIGLAHC--SSFEDRLFPRPDPTISPTFLSRLKRTCPAKGTDR 220
Query: 179 -----TNNPLIFDNSYFXXXXXXXXXXXXXXPSDKALLEDPVFRPLVEKYAADEDAVFAD 233
P +FDN Y+ SD+ L + + RP+VE++A + F
Sbjct: 221 RTVLDVRTPNVFDNKYYIDLVNREGLFV----SDQDLFTNAITRPIVERFAQSQQDFFEQ 276
Query: 234 YAEAHLKLSEL 244
+ + K+ ++
Sbjct: 277 FGVSIGKMGQM 287
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSD---PPPE 128
G ++ + +E P ++S AD +A +V GG GR D +
Sbjct: 76 GFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSAN 135
Query: 129 GRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGR 166
LP L F + G + KE+V LSG HT+G+
Sbjct: 136 SDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQ 173
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPD--KSDPPPEG 129
G ++ + +E P ++S AD LA +V ++GGP GR D ++
Sbjct: 73 GFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSAN 132
Query: 130 RLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGR 166
LP+ + D + F + L+ ++V LSG HT G+
Sbjct: 133 NLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQ 169
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 73 GLDIAVRLLEPIEQQFP-ILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKS---DPPPE 128
G ++ +E P +S AD A + + G GR D +
Sbjct: 76 GFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEAN 135
Query: 129 GRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCH 168
++P+ + L + F + L+ E+V LSG H++G H
Sbjct: 136 AQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAH 175
>pdb|3AMJ|C Chain C, The Crystal Structure Of The Heterodimer Of M16b
Peptidase From Sphingomonas Sp. A1
pdb|3AMJ|A Chain A, The Crystal Structure Of The Heterodimer Of M16b
Peptidase From Sphingomonas Sp. A1
Length = 437
Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 23 LRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIRH 62
L+ ++ E H AP ++ + W+ G+ D T T G + H
Sbjct: 16 LKVVVREDHRAPTLVHMVWYRVGSMDETTGTTGVAHALEH 55
>pdb|3AMI|A Chain A, The Crystal Structure Of The M16b Metallopeptidase
Subunit From Sphingomonas Sp. A1
pdb|3AMI|B Chain B, The Crystal Structure Of The M16b Metallopeptidase
Subunit From Sphingomonas Sp. A1
Length = 445
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 23 LRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIRH 62
L+ ++ E H AP ++ + W+ G+ D T T G + H
Sbjct: 16 LKVVVREDHRAPTLVHMVWYRVGSMDETTGTTGVAHALEH 55
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.139 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,267,993
Number of Sequences: 62578
Number of extensions: 365905
Number of successful extensions: 1067
Number of sequences better than 100.0: 148
Number of HSP's better than 100.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 651
Number of HSP's gapped (non-prelim): 196
length of query: 250
length of database: 14,973,337
effective HSP length: 96
effective length of query: 154
effective length of database: 8,965,849
effective search space: 1380740746
effective search space used: 1380740746
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)