Query 025593
Match_columns 250
No_of_seqs 272 out of 781
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 13:28:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025593.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025593hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a9s_A Competence/damage-induc 100.0 1E-35 3.5E-40 253.9 15.9 142 4-157 12-168 (171)
2 1yum_A 'probable nicotinate-nu 98.5 4E-08 1.4E-12 86.7 3.4 29 211-239 21-49 (242)
3 3hl4_A Choline-phosphate cytid 98.1 1.4E-06 4.7E-11 77.6 4.5 38 210-249 73-110 (236)
4 3elb_A Ethanolamine-phosphate 98.1 1.5E-06 5.2E-11 80.8 4.3 35 210-248 195-231 (341)
5 1jhd_A Sulfate adenylyltransfe 97.6 2.1E-05 7.2E-10 74.5 2.5 34 215-250 194-227 (396)
6 1v47_A ATP sulfurylase; produc 97.1 0.00021 7.3E-09 66.5 3.0 27 219-249 161-187 (349)
7 3gmi_A UPF0348 protein MJ0951; 94.9 0.016 5.3E-07 54.2 3.6 28 211-238 50-77 (357)
8 2gks_A Bifunctional SAT/APS ki 77.7 0.93 3.2E-05 44.0 2.2 21 219-239 169-189 (546)
9 1m8p_A Sulfate adenylyltransfe 75.5 1.3 4.5E-05 43.2 2.6 21 219-239 196-216 (573)
10 1r6x_A ATP:sulfate adenylyltra 75.0 2.3 8E-05 40.0 4.0 24 216-239 190-214 (395)
11 1g8f_A Sulfate adenylyltransfe 67.0 3.3 0.00011 40.1 3.2 21 219-239 194-215 (511)
12 3cov_A Pantothenate synthetase 53.3 8.6 0.00029 35.0 3.2 15 225-239 44-59 (301)
13 3n8h_A Pantothenate synthetase 48.8 13 0.00043 33.3 3.5 29 212-241 23-51 (264)
14 3q12_A Pantoate--beta-alanine 41.8 16 0.00056 33.0 3.1 17 225-241 36-52 (287)
15 3mxt_A Pantothenate synthetase 39.9 16 0.00055 33.0 2.8 26 214-241 26-51 (285)
16 3inn_A Pantothenate synthetase 38.6 24 0.00083 32.3 3.8 15 225-239 54-68 (314)
17 1x6v_B Bifunctional 3'-phospho 35.3 15 0.00052 36.4 2.0 26 213-239 413-438 (630)
18 3cr8_A Sulfate adenylyltranfer 34.1 29 0.00099 33.6 3.8 25 214-239 165-189 (552)
19 3u7d_B Protein HEG homolog 1; 23.9 21 0.00073 20.8 0.5 11 216-226 5-15 (26)
20 2zp1_A Tyrosyl-tRNA synthetase 22.3 86 0.0029 27.9 4.4 39 185-239 17-55 (314)
No 1
>2a9s_A Competence/damage-inducible protein CINA; APC5759, ATC1417, MCSG, protei structure initiative; 1.75A {Agrobacterium tumefaciens} SCOP: c.51.5.1
Probab=100.00 E-value=1e-35 Score=253.91 Aligned_cols=142 Identities=23% Similarity=0.286 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHcCCCeEEE--EeccchHHHHhHhcCCCCcccccccceeecCHHHHHHHhCCCCC-----CCCCHHHHHH
Q 025593 4 ACIRGVVEAIHASPTQAVV--YIAGGASQALGMLMSIPGATNTVLEAVVPYSRMSMIQLLGQIPN-----QFCSQQTAVN 76 (250)
Q Consensus 4 ~~~~~~v~~ih~s~~~~v~--s~TGG~~~~~~~Lt~vPGsS~~flgg~V~YS~~sK~~lLgv~~~-----gaVS~etA~~ 76 (250)
.+.+.+++.+.++++++.+ |||||++ +++||++||+|++|.||+|+|||++|+++|||+++ |+||+|||++
T Consensus 12 ~l~~~v~~~L~~~~~tla~AEScTGGll--a~~lt~vpGaS~~f~gG~VtYsn~~K~~lLgV~~~~L~~~GaVS~evA~~ 89 (171)
T 2a9s_A 12 ELARRIITDFTPLGLMVSTAESCTGGLI--AGALTEIAGSSAVVDRGFVTYTNDAKRDMLGVGTETLTTFGAVSRQTALQ 89 (171)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESTTTTHH--HHHHTTSTTGGGTEEEEEEECSHHHHHHHHCCCHHHHHHHCSSSHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEeHHhhHHHH--HHHHHhCCCchhhcCCeEEecCHHHHHHHcCCCHHHHHhcCCCCHHHHHH
Confidence 4677899999999999998 8999975 99999999999999999999999999999999987 9999999999
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEEEceecCC---CCCCC-CCceEEEEEEeCCe-eEEEEEEe-CCCchhHHHHHHHHH--
Q 025593 77 MALLAYNRALKLSRPGAPVLGVGFTGALAS---THPKL-GDHRFHLSTRTSDR-LWVSTVTL-SKGLRTREQEDKVSS-- 148 (250)
Q Consensus 77 MA~~a~~r~~~ls~~~~~digIs~TGiaG~---~~~kp-G~htvyIai~~~~~-~~~~~~~l-~~~~R~r~~e~~~~s-- 148 (250)
||+++++++ ++||||++||+||| +.+|| | +||||++++++ .++++++| .++ |+.+++.++..
T Consensus 90 MA~ga~~~~-------~ad~avavTGiAGP~g~~~~kpvG--tV~ia~a~~~~~~~~~~~~f~~g~-R~~ir~~a~~~AL 159 (171)
T 2a9s_A 90 MAHGALYRS-------RANFAVAVTGIAGPGGGSAEKPVG--LVHLATKARNGNVLHHEMRYGDIG-RTEIRLATVRTAL 159 (171)
T ss_dssp HHHHHHHTS-------SCSEEEEEEECCSSSCCCSSSCTT--EEEEEEEETTSCEEEEEEECCSCC-HHHHHHHHHHHHH
T ss_pred HHHhHHHHh-------CCCEEEEEeecCCCCCCCCCCCCc--EEEEEEEeCCCCEEEEEEECCCCC-HHHHHHHHHHHHH
Confidence 999999998 79999999999997 35688 9 99999999987 78999999 766 99999999854
Q ss_pred HHHHHHHHh
Q 025593 149 HLLLKAMAS 157 (250)
Q Consensus 149 ~lL~~~La~ 157 (250)
++|++.|.+
T Consensus 160 ~~L~~~L~~ 168 (171)
T 2a9s_A 160 EMLIALNQA 168 (171)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 888887753
No 2
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=98.51 E-value=4e-08 Score=86.74 Aligned_cols=29 Identities=24% Similarity=0.488 Sum_probs=26.8
Q ss_pred CCCeEEEecCCCCcCchhHHHHHHHHHhc
Q 025593 211 NEERKIILSGSFNPLHDGHLKLLEVATRN 239 (250)
Q Consensus 211 ~~~~~~i~~GsFnP~h~gHl~~~~~a~~~ 239 (250)
..++++||+|||||+|+||+.|+++|.++
T Consensus 21 ~~~~i~i~~GsFdPiH~GHl~li~~a~~~ 49 (242)
T 1yum_A 21 MGKRIGLFGGTFDPVHIGHMRSAVEMAEQ 49 (242)
T ss_dssp -CCEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCceEEEEEeeCcHhhHHHHHHHHHHHHH
Confidence 45789999999999999999999999998
No 3
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=98.15 E-value=1.4e-06 Score=77.59 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=32.4
Q ss_pred CCCCeEEEecCCCCcCchhHHHHHHHHHhcccCCccceee
Q 025593 210 FNEERKIILSGSFNPLHDGHLKLLEVATRNDCDYFKSALF 249 (250)
Q Consensus 210 ~~~~~~~i~~GsFnP~h~gHl~~~~~a~~~~~~~l~~~~~ 249 (250)
.+.+++++++|+|||+|.||+.++++|.++ +.-|+++.
T Consensus 73 ~~~~~~V~~~GtFD~~H~GHl~iL~rAk~l--f~gD~LIV 110 (236)
T 3hl4_A 73 CERPVRVYADGIFDLFHSGHARALMQAKNL--FPNTYLIV 110 (236)
T ss_dssp TTSCEEEEEEECCTTCCHHHHHHHHHHHTS--SSSEEEEE
T ss_pred CCCCeEEEEeccCCCCCHHHHHHHHHHHHh--cCCCeEEE
Confidence 467889999999999999999999999999 54466553
No 4
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=98.11 E-value=1.5e-06 Score=80.81 Aligned_cols=35 Identities=29% Similarity=0.436 Sum_probs=31.1
Q ss_pred CCCCeEEEecCCCCcCchhHHHHHHHHHhcccCCcc--cee
Q 025593 210 FNEERKIILSGSFNPLHDGHLKLLEVATRNDCDYFK--SAL 248 (250)
Q Consensus 210 ~~~~~~~i~~GsFnP~h~gHl~~~~~a~~~~~~~l~--~~~ 248 (250)
.++.+++++||||||+|.||++++++|.++ .| +++
T Consensus 195 ~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l----~D~~~Li 231 (341)
T 3elb_A 195 QPGETVIYVAGAFDLFHIGHVDFLEKVHRL----AERPYII 231 (341)
T ss_dssp CTTCEEEEEEECCTTCCHHHHHHHHHHHTT----SSSEEEE
T ss_pred CCCCEEEEEecccCCCCHHHHHHHHHHHHh----CCCCEEE
Confidence 467789999999999999999999999999 67 554
No 5
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=97.59 E-value=2.1e-05 Score=74.49 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=29.7
Q ss_pred EEEecCCCCcCchhHHHHHHHHHhcccCCccceeeC
Q 025593 215 KIILSGSFNPLHDGHLKLLEVATRNDCDYFKSALFL 250 (250)
Q Consensus 215 ~~i~~GsFnP~h~gHl~~~~~a~~~~~~~l~~~~~~ 250 (250)
..+-+|||||+|.||+.|+++|++. +++|.|||.
T Consensus 194 ~VvafqTrNPiHrgH~~l~~~Ale~--~~~D~vll~ 227 (396)
T 1jhd_A 194 KVVAFQTRNPMHRAHEELCRMAMES--LDADGVVVH 227 (396)
T ss_dssp SEEEEEESSCCCHHHHHHHHHHHHH--HTCSEEEEE
T ss_pred eEEEeccCCCCchHHHHHHHHHHHH--cCCCeEEEE
Confidence 3444999999999999999999999 788999873
No 6
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=97.10 E-value=0.00021 Score=66.54 Aligned_cols=27 Identities=19% Similarity=0.150 Sum_probs=25.3
Q ss_pred cCCCCcCchhHHHHHHHHHhcccCCccceee
Q 025593 219 SGSFNPLHDGHLKLLEVATRNDCDYFKSALF 249 (250)
Q Consensus 219 ~GsFnP~h~gHl~~~~~a~~~~~~~l~~~~~ 249 (250)
-|||||+|.||+.|+++|++. +|.|||
T Consensus 161 fqTrNPiHrgH~~l~~~ale~----~d~vll 187 (349)
T 1v47_A 161 FQTRNAPHRAHEYLIRLGLEL----ADGVLV 187 (349)
T ss_dssp EEESSCCCHHHHHHHHHHHHH----SSEEEE
T ss_pred eecCCCCchHHHHHHHHHHHh----CCcEEE
Confidence 699999999999999999998 799987
No 7
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=94.91 E-value=0.016 Score=54.19 Aligned_cols=28 Identities=32% Similarity=0.521 Sum_probs=24.2
Q ss_pred CCCeEEEecCCCCcCchhHHHHHHHHHh
Q 025593 211 NEERKIILSGSFNPLHDGHLKLLEVATR 238 (250)
Q Consensus 211 ~~~~~~i~~GsFnP~h~gHl~~~~~a~~ 238 (250)
..+++++-=|.|||+|+||..++++|.+
T Consensus 50 ~~~~~v~~lG~FDg~H~GHq~lI~~a~~ 77 (357)
T 3gmi_A 50 NKDKIVCDFTEYNPLHKGHKYALEKGKE 77 (357)
T ss_dssp TCCCEEEEECCCTTCCHHHHHHHHHHHT
T ss_pred CCCCEEEEEEecCccCHHHHHHHHHHHH
Confidence 3445677889999999999999999987
No 8
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=77.71 E-value=0.93 Score=43.96 Aligned_cols=21 Identities=29% Similarity=0.325 Sum_probs=18.3
Q ss_pred cCCCCcCchhHHHHHHHHHhc
Q 025593 219 SGSFNPLHDGHLKLLEVATRN 239 (250)
Q Consensus 219 ~GsFnP~h~gHl~~~~~a~~~ 239 (250)
-=++||+|.||..|++.|...
T Consensus 169 fqtrnP~Hr~H~~l~~~a~~~ 189 (546)
T 2gks_A 169 FQTRNPMHRVHEELTKRAMEK 189 (546)
T ss_dssp ECCSSCCCHHHHHHHHHHHHH
T ss_pred EecCCCCcHHHHHHHHHHHHh
Confidence 357999999999999999874
No 9
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=75.52 E-value=1.3 Score=43.22 Aligned_cols=21 Identities=33% Similarity=0.434 Sum_probs=18.4
Q ss_pred cCCCCcCchhHHHHHHHHHhc
Q 025593 219 SGSFNPLHDGHLKLLEVATRN 239 (250)
Q Consensus 219 ~GsFnP~h~gHl~~~~~a~~~ 239 (250)
-=++||+|.||..|++.|...
T Consensus 196 fqtrnP~Hr~H~~l~~~a~~~ 216 (573)
T 1m8p_A 196 FQTRNPMHRAHRELTVRAARS 216 (573)
T ss_dssp ECCSSCCCHHHHHHHHHHHHH
T ss_pred EeeCCCcchhhHHHHHHHHHh
Confidence 457999999999999998876
No 10
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=75.00 E-value=2.3 Score=40.04 Aligned_cols=24 Identities=21% Similarity=0.339 Sum_probs=17.2
Q ss_pred EEecCCCCcCchhH-HHHHHHHHhc
Q 025593 216 IILSGSFNPLHDGH-LKLLEVATRN 239 (250)
Q Consensus 216 ~i~~GsFnP~h~gH-l~~~~~a~~~ 239 (250)
.+=-.|+||+|.|| ..+.+.|.+.
T Consensus 190 VvafqtrNP~HraH~e~~~r~a~e~ 214 (395)
T 1r6x_A 190 VVAFQTRNPMHRAHRELTVRAAREA 214 (395)
T ss_dssp EEEECCSSCCCHHHHHHHHHHHHHT
T ss_pred EEEeccCCCcchhhHHHHHHHHHHc
Confidence 33356999999999 5666666654
No 11
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=66.96 E-value=3.3 Score=40.10 Aligned_cols=21 Identities=24% Similarity=0.308 Sum_probs=16.2
Q ss_pred cCCCCcCchhH-HHHHHHHHhc
Q 025593 219 SGSFNPLHDGH-LKLLEVATRN 239 (250)
Q Consensus 219 ~GsFnP~h~gH-l~~~~~a~~~ 239 (250)
-.++||+|.|| ..+.+.|.+.
T Consensus 194 fqtrnP~HraH~e~~~~~a~e~ 215 (511)
T 1g8f_A 194 FQTRNPMHRAHRELTVRAAREA 215 (511)
T ss_dssp EEESSCCCHHHHHHHHHHHHHH
T ss_pred EecCCCCchHHHHHHHHHHHHc
Confidence 56899999999 5666666664
No 12
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=53.34 E-value=8.6 Score=34.95 Aligned_cols=15 Identities=53% Similarity=0.922 Sum_probs=14.5
Q ss_pred CchhHHHHHHHHHh-c
Q 025593 225 LHDGHLKLLEVATR-N 239 (250)
Q Consensus 225 ~h~gHl~~~~~a~~-~ 239 (250)
+|.||+.|+++|.+ .
T Consensus 44 LH~GH~sLI~~A~~~~ 59 (301)
T 3cov_A 44 LHEGHLALVRAAKRVP 59 (301)
T ss_dssp CCHHHHHHHHHHHTST
T ss_pred ccHHHHHHHHHHHHhc
Confidence 99999999999999 6
No 13
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=48.76 E-value=13 Score=33.35 Aligned_cols=29 Identities=21% Similarity=0.492 Sum_probs=21.6
Q ss_pred CCeEEEecCCCCcCchhHHHHHHHHHhccc
Q 025593 212 EERKIILSGSFNPLHDGHLKLLEVATRNDC 241 (250)
Q Consensus 212 ~~~~~i~~GsFnP~h~gHl~~~~~a~~~~~ 241 (250)
+.+||+.| |.-=+|.||+.|+++|.+.+.
T Consensus 23 g~~ig~VP-TMGaLH~GHlsLv~~Ar~~~d 51 (264)
T 3n8h_A 23 QQKIGFVP-TMGALHNGHISLIKKAKSEND 51 (264)
T ss_dssp TSCEEEEE-ECSSCCHHHHHHHHHHHHHCS
T ss_pred CCcEEEEC-CCcchhHHHHHHHHHHHHhCC
Confidence 34566655 345699999999999988743
No 14
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=41.77 E-value=16 Score=32.97 Aligned_cols=17 Identities=35% Similarity=0.665 Sum_probs=15.2
Q ss_pred CchhHHHHHHHHHhccc
Q 025593 225 LHDGHLKLLEVATRNDC 241 (250)
Q Consensus 225 ~h~gHl~~~~~a~~~~~ 241 (250)
+|.||+.|+++|.+.+.
T Consensus 36 LH~GHlsLv~~Ar~~~d 52 (287)
T 3q12_A 36 LHEGHMTLVDEAKTRAD 52 (287)
T ss_dssp CCHHHHHHHHHHHTTSS
T ss_pred ccHHHHHHHHHHHHhCC
Confidence 99999999999988643
No 15
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=39.93 E-value=16 Score=33.00 Aligned_cols=26 Identities=31% Similarity=0.363 Sum_probs=18.0
Q ss_pred eEEEecCCCCcCchhHHHHHHHHHhccc
Q 025593 214 RKIILSGSFNPLHDGHLKLLEVATRNDC 241 (250)
Q Consensus 214 ~~~i~~GsFnP~h~gHl~~~~~a~~~~~ 241 (250)
+||+.|. .-=+|.||+.|+++|.+ +.
T Consensus 26 ~Ig~VPT-MGaLH~GHlsLv~~Ar~-~d 51 (285)
T 3mxt_A 26 SIGYVPT-MGFLHDGHLSLVKHAKT-QD 51 (285)
T ss_dssp CEEEEEE-CSSCCHHHHHHHHHHTT-SS
T ss_pred eEEEEcC-CCcccHHHHHHHHHHHh-CC
Confidence 4554442 22399999999999976 44
No 16
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=38.56 E-value=24 Score=32.25 Aligned_cols=15 Identities=47% Similarity=0.747 Sum_probs=14.6
Q ss_pred CchhHHHHHHHHHhc
Q 025593 225 LHDGHLKLLEVATRN 239 (250)
Q Consensus 225 ~h~gHl~~~~~a~~~ 239 (250)
+|.||+.|+++|.+.
T Consensus 54 LH~GHlsLi~~A~~~ 68 (314)
T 3inn_A 54 LHKGHLELVRRARVE 68 (314)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHh
Confidence 999999999999998
No 17
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=35.31 E-value=15 Score=36.40 Aligned_cols=26 Identities=23% Similarity=0.431 Sum_probs=20.6
Q ss_pred CeEEEecCCCCcCchhHHHHHHHHHhc
Q 025593 213 ERKIILSGSFNPLHDGHLKLLEVATRN 239 (250)
Q Consensus 213 ~~~~i~~GsFnP~h~gHl~~~~~a~~~ 239 (250)
.+|.-| =+-||+|.||-.|.+.|++.
T Consensus 413 ~~Vvaf-qtrNP~HraHe~l~~~a~~~ 438 (630)
T 1x6v_B 413 DAVSAF-QLRNPVHNGHALLMQDTHKQ 438 (630)
T ss_dssp SEEEEE-EESSCCCHHHHHHHHHHHHH
T ss_pred CeEEEE-ecCCCccHHHHHHHHHHHHH
Confidence 344445 48999999999999999873
No 18
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=34.08 E-value=29 Score=33.62 Aligned_cols=25 Identities=16% Similarity=0.240 Sum_probs=19.8
Q ss_pred eEEEecCCCCcCchhHHHHHHHHHhc
Q 025593 214 RKIILSGSFNPLHDGHLKLLEVATRN 239 (250)
Q Consensus 214 ~~~i~~GsFnP~h~gHl~~~~~a~~~ 239 (250)
+|.-| =+-||+|.||..+...|...
T Consensus 165 ~v~af-qtrnp~Hrah~~~~~~~~~~ 189 (552)
T 3cr8_A 165 RIIAW-QARQPMHRAQYEFCLKSAIE 189 (552)
T ss_dssp SEEEE-CCSSCCCHHHHHHHHHHHHH
T ss_pred ceEEE-ecCCCCchHHHHHHHHHHHh
Confidence 34444 68999999999998888855
No 19
>3u7d_B Protein HEG homolog 1; FERM domain, RAP1 effector, membrane protein cytoplasmic TAI protein binding; 2.49A {Homo sapiens}
Probab=23.90 E-value=21 Score=20.76 Aligned_cols=11 Identities=36% Similarity=0.800 Sum_probs=9.4
Q ss_pred EEecCCCCcCc
Q 025593 216 IILSGSFNPLH 226 (250)
Q Consensus 216 ~i~~GsFnP~h 226 (250)
.||||-+||--
T Consensus 5 ciypgqynpsf 15 (26)
T 3u7d_B 5 CIFPGQYNPSF 15 (26)
T ss_pred ccccCccCccc
Confidence 68999999964
No 20
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A*
Probab=22.27 E-value=86 Score=27.94 Aligned_cols=39 Identities=13% Similarity=0.164 Sum_probs=24.0
Q ss_pred hHHHHHHhcCceeEEEcCCCCccccCCCCeEEEecCCCCcCchhHHHHHHHHHhc
Q 025593 185 DQELEQIINGEICFKVYPFLNETQVFNEERKIILSGSFNPLHDGHLKLLEVATRN 239 (250)
Q Consensus 185 ~~~l~~ll~g~i~~~~~~~~~~~~~~~~~~~~i~~GsFnP~h~gHl~~~~~a~~~ 239 (250)
.++|+++++|+-- .+ -.|+-|.. ++|+||+.-+.....+
T Consensus 17 ~~~l~~~L~~~~~-~v-------------y~G~~PTg--~lHlGhl~~l~~~~~l 55 (314)
T 2zp1_A 17 EEELREVLKKDEK-SA-------------YIGFEPSG--KIHLGHYLQIKKMIDL 55 (314)
T ss_dssp HHHHHHHHTSSSE-EE-------------EEEECCCS--SCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCC-EE-------------EEccCCCC--CcchhhHHHHHHHHHH
Confidence 3678888874321 11 23666643 6999997666665554
Done!