Query 025594
Match_columns 250
No_of_seqs 308 out of 1217
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 07:26:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025594.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025594hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1150 Predicted molecular ch 100.0 1.1E-54 2.4E-59 369.0 24.0 221 7-237 8-249 (250)
2 COG0484 DnaJ DnaJ-class molecu 99.8 3.2E-21 7E-26 179.5 6.6 71 39-109 2-73 (371)
3 KOG0713 Molecular chaperone (D 99.8 7.5E-21 1.6E-25 173.6 8.2 72 39-110 14-86 (336)
4 PRK14288 chaperone protein Dna 99.8 1.2E-18 2.5E-23 163.7 7.1 69 40-108 2-71 (369)
5 PRK14296 chaperone protein Dna 99.7 2E-18 4.3E-23 162.4 7.3 70 40-109 3-72 (372)
6 KOG0712 Molecular chaperone (D 99.7 4.8E-18 1.1E-22 156.5 7.9 68 40-109 3-70 (337)
7 KOG0691 Molecular chaperone (D 99.7 1.4E-16 3E-21 145.2 15.5 72 40-111 4-76 (296)
8 PF00226 DnaJ: DnaJ domain; I 99.7 9E-18 1.9E-22 119.3 5.7 62 42-103 1-64 (64)
9 PRK14279 chaperone protein Dna 99.7 1.6E-17 3.5E-22 157.2 7.4 69 40-108 8-77 (392)
10 PRK14286 chaperone protein Dna 99.7 1.7E-17 3.8E-22 156.0 7.3 70 40-109 3-73 (372)
11 PRK14287 chaperone protein Dna 99.7 1.8E-17 4E-22 155.8 6.9 70 40-109 3-72 (371)
12 PRK14283 chaperone protein Dna 99.7 2.8E-17 6.1E-22 154.8 7.2 70 40-109 4-73 (378)
13 PRK14276 chaperone protein Dna 99.7 2.3E-17 5.1E-22 155.5 6.4 70 40-109 3-72 (380)
14 PRK14291 chaperone protein Dna 99.7 3.1E-17 6.8E-22 154.7 7.0 70 40-109 2-71 (382)
15 PRK14299 chaperone protein Dna 99.7 3.3E-17 7.2E-22 149.4 6.8 70 40-109 3-72 (291)
16 PTZ00037 DnaJ_C chaperone prot 99.7 3.7E-17 8.1E-22 155.9 6.7 67 40-109 27-93 (421)
17 PRK14298 chaperone protein Dna 99.7 3.4E-17 7.4E-22 154.2 6.1 69 40-108 4-72 (377)
18 PRK14280 chaperone protein Dna 99.7 5E-17 1.1E-21 153.0 6.6 68 41-108 4-71 (376)
19 PRK14278 chaperone protein Dna 99.7 6.7E-17 1.5E-21 152.3 6.9 67 41-107 3-69 (378)
20 PRK14285 chaperone protein Dna 99.7 7E-17 1.5E-21 151.5 6.4 69 41-109 3-72 (365)
21 PRK14277 chaperone protein Dna 99.7 9.1E-17 2E-21 151.8 7.2 69 41-109 5-74 (386)
22 PTZ00341 Ring-infected erythro 99.7 4.5E-16 9.7E-21 157.8 12.4 71 39-109 571-641 (1136)
23 KOG0716 Molecular chaperone (D 99.7 1.3E-16 2.9E-21 142.0 7.6 71 40-110 30-101 (279)
24 PRK14294 chaperone protein Dna 99.7 1.1E-16 2.4E-21 150.2 7.1 70 40-109 3-73 (366)
25 PRK14282 chaperone protein Dna 99.7 9.3E-17 2E-21 150.9 6.5 69 40-108 3-73 (369)
26 PRK14284 chaperone protein Dna 99.7 1.2E-16 2.6E-21 151.1 6.8 69 41-109 1-70 (391)
27 PRK14295 chaperone protein Dna 99.6 1.5E-16 3.4E-21 150.4 6.7 65 40-104 8-73 (389)
28 PRK14301 chaperone protein Dna 99.6 1.5E-16 3.2E-21 149.7 6.5 70 40-109 3-73 (373)
29 KOG0718 Molecular chaperone (D 99.6 2.3E-16 5E-21 149.0 7.6 70 40-109 8-81 (546)
30 KOG0717 Molecular chaperone (D 99.6 2.4E-16 5.3E-21 148.6 7.2 68 40-107 7-76 (508)
31 PRK14297 chaperone protein Dna 99.6 1.5E-16 3.3E-21 150.0 5.8 70 40-109 3-73 (380)
32 PRK10767 chaperone protein Dna 99.6 2.2E-16 4.7E-21 148.4 6.7 70 40-109 3-73 (371)
33 TIGR02349 DnaJ_bact chaperone 99.6 2.8E-16 6E-21 146.7 6.7 68 42-109 1-68 (354)
34 PRK14281 chaperone protein Dna 99.6 3E-16 6.6E-21 148.7 6.9 69 41-109 3-72 (397)
35 PRK14293 chaperone protein Dna 99.6 3.7E-16 8E-21 147.1 7.1 68 41-108 3-70 (374)
36 PRK14300 chaperone protein Dna 99.6 3.2E-16 7E-21 147.4 6.7 69 41-109 3-71 (372)
37 PRK10266 curved DNA-binding pr 99.6 5.7E-16 1.2E-20 142.2 7.5 67 41-107 4-70 (306)
38 PRK14292 chaperone protein Dna 99.6 4.7E-16 1E-20 146.1 6.5 68 41-108 2-69 (371)
39 smart00271 DnaJ DnaJ molecular 99.6 1.1E-15 2.3E-20 106.9 5.9 57 41-97 1-59 (60)
40 cd06257 DnaJ DnaJ domain or J- 99.6 1.4E-15 3.1E-20 104.3 6.2 54 42-95 1-55 (55)
41 PRK14289 chaperone protein Dna 99.6 9.8E-16 2.1E-20 144.7 7.3 70 40-109 4-74 (386)
42 KOG0715 Molecular chaperone (D 99.6 1.7E-15 3.7E-20 138.0 7.5 69 41-109 43-111 (288)
43 PRK14290 chaperone protein Dna 99.6 1.5E-15 3.4E-20 142.4 6.5 68 41-108 3-72 (365)
44 KOG0719 Molecular chaperone (D 99.6 1.9E-15 4.2E-20 132.1 5.4 68 40-107 13-83 (264)
45 KOG0721 Molecular chaperone (D 99.6 5.6E-15 1.2E-19 128.0 6.6 68 40-107 98-166 (230)
46 KOG0720 Molecular chaperone (D 99.5 7.9E-15 1.7E-19 138.5 7.1 75 31-107 227-301 (490)
47 COG2214 CbpA DnaJ-class molecu 99.5 4.3E-14 9.4E-19 119.4 7.1 67 40-106 5-73 (237)
48 TIGR03835 termin_org_DnaJ term 99.5 4.5E-14 9.9E-19 140.6 7.3 68 41-108 2-69 (871)
49 PRK05014 hscB co-chaperone Hsc 99.4 4.7E-13 1E-17 113.5 7.8 67 41-107 1-75 (171)
50 PHA03102 Small T antigen; Revi 99.4 1.3E-13 2.7E-18 114.9 4.1 64 42-108 6-71 (153)
51 PRK01356 hscB co-chaperone Hsc 99.4 5.7E-13 1.2E-17 112.5 7.9 67 41-107 2-74 (166)
52 PRK00294 hscB co-chaperone Hsc 99.4 2.1E-12 4.6E-17 109.7 8.4 68 40-107 3-78 (173)
53 PRK03578 hscB co-chaperone Hsc 99.3 2.5E-12 5.3E-17 109.6 8.1 69 39-107 4-80 (176)
54 KOG0722 Molecular chaperone (D 99.2 4.2E-12 9E-17 112.7 4.1 71 37-107 29-99 (329)
55 KOG0624 dsRNA-activated protei 99.2 2.6E-11 5.7E-16 112.2 6.5 76 31-106 383-463 (504)
56 PRK09430 djlA Dna-J like membr 99.1 7.5E-11 1.6E-15 106.6 6.6 55 41-95 200-262 (267)
57 PTZ00100 DnaJ chaperone protei 99.1 6E-11 1.3E-15 94.5 4.6 51 41-94 65-115 (116)
58 KOG0714 Molecular chaperone (D 99.1 4E-11 8.6E-16 106.1 3.8 70 40-109 2-73 (306)
59 KOG0550 Molecular chaperone (D 99.1 1.3E-10 2.8E-15 109.4 6.0 78 29-106 353-440 (486)
60 PRK01773 hscB co-chaperone Hsc 99.0 8.5E-10 1.9E-14 93.8 8.1 67 41-107 2-76 (173)
61 COG5407 SEC63 Preprotein trans 99.0 2.7E-10 5.9E-15 107.9 4.8 67 40-106 97-169 (610)
62 PHA02624 large T antigen; Prov 99.0 4.8E-10 1E-14 110.7 5.2 59 41-102 11-71 (647)
63 TIGR00714 hscB Fe-S protein as 98.9 6E-09 1.3E-13 87.3 7.4 56 52-107 2-63 (157)
64 COG5269 ZUO1 Ribosome-associat 98.6 3.1E-08 6.7E-13 89.0 4.1 71 37-107 39-115 (379)
65 KOG0568 Molecular chaperone (D 98.0 7.8E-06 1.7E-10 72.3 4.4 54 41-94 47-101 (342)
66 KOG1789 Endocytosis protein RM 97.9 1.2E-05 2.6E-10 83.2 5.0 51 42-94 1282-1336(2235)
67 KOG0723 Molecular chaperone (D 97.8 2.8E-05 6E-10 60.9 5.1 47 46-95 61-107 (112)
68 KOG3192 Mitochondrial J-type c 97.3 0.0005 1.1E-08 57.4 5.4 67 41-107 8-82 (168)
69 KOG0431 Auxilin-like protein a 96.5 0.0025 5.5E-08 61.9 4.3 44 50-93 397-448 (453)
70 COG1076 DjlA DnaJ-domain-conta 96.2 0.0093 2E-07 50.6 5.5 53 41-93 113-173 (174)
71 COG1076 DjlA DnaJ-domain-conta 94.9 0.024 5.2E-07 48.1 3.2 68 42-109 2-77 (174)
72 PF03656 Pam16: Pam16; InterP 93.0 0.17 3.7E-06 41.1 4.6 48 44-94 61-108 (127)
73 PF12339 DNAJ_related: DNA-J r 86.6 0.45 9.8E-06 38.9 2.0 35 7-41 93-129 (132)
74 PF13446 RPT: A repeated domai 82.3 2 4.4E-05 29.9 3.6 26 42-67 6-31 (62)
75 KOG1029 Endocytic adaptor prot 74.3 47 0.001 34.9 11.6 19 192-210 403-421 (1118)
76 KOG0724 Zuotin and related mol 70.6 4.4 9.5E-05 37.5 3.3 55 52-106 3-62 (335)
77 PF11833 DUF3353: Protein of u 66.0 11 0.00025 32.6 4.7 38 50-94 1-38 (194)
78 COG5552 Uncharacterized conser 52.6 55 0.0012 24.3 5.6 45 42-86 4-48 (88)
79 cd00171 Sec7 Sec7 domain; Doma 47.2 70 0.0015 27.2 6.5 95 10-106 79-181 (185)
80 KOG1029 Endocytic adaptor prot 47.2 74 0.0016 33.5 7.4 12 55-66 190-201 (1118)
81 PF14687 DUF4460: Domain of un 46.2 40 0.00086 26.7 4.4 24 52-75 5-28 (112)
82 PF07946 DUF1682: Protein of u 42.8 1.5E+02 0.0034 27.4 8.5 22 46-67 128-149 (321)
83 smart00222 Sec7 Sec7 domain. D 37.5 1.1E+02 0.0024 25.9 6.2 97 9-106 79-183 (187)
84 PF10041 DUF2277: Uncharacteri 32.3 1.9E+02 0.0041 21.5 5.7 44 42-85 4-47 (78)
85 KOG3442 Uncharacterized conser 31.9 63 0.0014 26.3 3.5 32 44-75 62-93 (132)
86 PF06637 PV-1: PV-1 protein (P 31.6 4.9E+02 0.011 25.3 14.1 45 17-65 231-275 (442)
87 PF12108 SF3a60_bindingd: Spli 30.9 39 0.00085 20.3 1.6 17 11-27 4-20 (28)
88 KOG3026 Splicing factor SPF30 30.0 55 0.0012 29.5 3.1 21 200-220 188-208 (262)
89 KOG1144 Translation initiation 27.6 3.5E+02 0.0075 28.9 8.6 7 32-38 112-118 (1064)
90 PRK13798 putative OHCU decarbo 26.2 2.6E+02 0.0055 23.5 6.5 54 21-75 9-76 (166)
91 KOG0163 Myosin class VI heavy 25.0 8.8E+02 0.019 26.0 12.8 9 87-95 840-848 (1259)
92 PF07709 SRR: Seven Residue Re 25.0 68 0.0015 15.8 1.7 13 82-94 2-14 (14)
93 PF06936 Selenoprotein_S: Sele 23.3 4.9E+02 0.011 22.5 8.1 17 204-220 113-129 (190)
94 KOG0906 Phosphatidylinositol 3 21.4 1.7E+02 0.0037 30.4 5.0 55 40-94 623-693 (843)
95 KOG0163 Myosin class VI heavy 21.3 1E+03 0.023 25.5 14.1 6 228-233 1041-1046(1259)
No 1
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-54 Score=369.04 Aligned_cols=221 Identities=37% Similarity=0.626 Sum_probs=201.1
Q ss_pred CCcCChHHHHHHHHHHHhhhhh-------hHHHHHHH----hcCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 025594 7 STAADDDLLLKSFFAEVSEVER-------DNEVLRIL----SCFKLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK 75 (250)
Q Consensus 7 ~~~~~~~~~~~~f~~e~~~i~~-------d~ei~rll----~~~~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~ 75 (250)
..+++..+.|..||+||++|++ .+||+||| +||++|||+||+|.|+++.++|++.||+||+++|||||+
T Consensus 8 ~~~g~t~~~f~~Fy~evk~~ek~d~vLts~~qIeRllrpgstyfnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~ 87 (250)
T KOG1150|consen 8 GGGGTTMEAFETFYQEVKSIEKRDSVLTSKQQIERLLRPGSTYFNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNP 87 (250)
T ss_pred CCCCCcHHHHHHHHHHHHhhhhhhcccCcHHHHHHHhcCCccccccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCc
Confidence 4566678999999999999998 38999999 479999999999999999999999999999999999998
Q ss_pred C--chHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH---HHHHHHHHhhHhhhhhhhhhcccchhhhhhcCcHHHHH
Q 025594 76 H--PQAKEAFGALAKAQQLLSDEQERDYILTQVHAAKGE---LRAKRKKQLKKDAASKIKSLVDEGKYEQQYEQSEEFQQ 150 (250)
Q Consensus 76 ~--~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a~~~---~~~e~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 150 (250)
+ +.|+.+|..|.+||..|.|+..|..++..+.+|+.. ++.++++++++++.+.+ +.++ +|..|++
T Consensus 88 Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~~~y~~ak~~~~~~~~ekkkklkKegkpt~---ieed-------Dp~lfk~ 157 (250)
T KOG1150|consen 88 DDAERAQKAFDIVKKAYKLLENDKIRKRCLDVYTAAKNRLEKVMSEKKKKLKKEGKPTI---IEED-------DPELFKQ 157 (250)
T ss_pred ccHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC---cccc-------CHHHHHH
Confidence 5 689999999999999999999999999999999874 47788999999877644 4444 7999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhHHHhhhccc-----cccC
Q 025594 151 ELKLKVREILTQQEWRRRKMQMRISEEEGRLKKDEEEQKEMWKRKREHEEQWEGTREQRVSSWRDFMKTGK-----KGKK 225 (250)
Q Consensus 151 ~~~~~~~kl~~e~E~rrr~~~~~~~~e~~R~~e~e~e~~e~~k~k~e~~k~wE~~Rd~RV~sWr~f~~~~k-----k~k~ 225 (250)
+|+.++++||+++|++|.+++++.++|++|.++.++++++.+|+.+||++|||+|||+||+|||+||.+++ |+.+
T Consensus 158 av~~~~mklfae~erkRk~~e~r~~~eRkr~re~eIeaeek~Kr~~E~qKnfEEsRd~Rv~sWrnFq~~t~K~kk~Kknk 237 (250)
T KOG1150|consen 158 AVYKQVMKLFAELERKRKELEARANEERKRQREEEIEAEEKRKREREWQKNFEESRDGRVGSWRNFQAKTKKGKKEKKNK 237 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHhhhcchhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999997653 2234
Q ss_pred CCCCCCCCCCCC
Q 025594 226 GEIRPPKLKTED 237 (250)
Q Consensus 226 ~~~~ppk~k~e~ 237 (250)
+.|+||++|||+
T Consensus 238 ~~~~pPkvk~e~ 249 (250)
T KOG1150|consen 238 TFLRPPKVKMEQ 249 (250)
T ss_pred cccCCCcccccC
Confidence 669999999986
No 2
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=3.2e-21 Score=179.51 Aligned_cols=71 Identities=35% Similarity=0.484 Sum_probs=68.1
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 39 FKLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK-HPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 39 ~~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~-~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
...|||+||||+.+||.++||+|||+||++||||+|+ ++.|.+.|..|++||+|||||++|+.||+++..+
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~ 73 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAG 73 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccc
Confidence 3579999999999999999999999999999999999 8899999999999999999999999999999876
No 3
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=7.5e-21 Score=173.61 Aligned_cols=72 Identities=36% Similarity=0.497 Sum_probs=68.6
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 025594 39 FKLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK-HPQAKEAFGALAKAQQLLSDEQERDYILTQVHAAK 110 (250)
Q Consensus 39 ~~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~-~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a~ 110 (250)
...|||+||||+.+||..+||+|||+||+++|||+|+ +|.|.+.|..|+.||+||+||.+|+.||.+++.+.
T Consensus 14 ~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL 86 (336)
T KOG0713|consen 14 AGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGL 86 (336)
T ss_pred cCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhh
Confidence 3689999999999999999999999999999999998 68999999999999999999999999999998763
No 4
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.75 E-value=1.2e-18 Score=163.72 Aligned_cols=69 Identities=33% Similarity=0.482 Sum_probs=65.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK-HPQAKEAFGALAKAQQLLSDEQERDYILTQVHA 108 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~-~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~ 108 (250)
+.|||+||||+++||.++||+|||+||++||||+|+ ++.|.+.|..|++||+||+||.+|..||.++..
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~ 71 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKK 71 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhccc
Confidence 469999999999999999999999999999999997 567889999999999999999999999998864
No 5
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.74 E-value=2e-18 Score=162.38 Aligned_cols=70 Identities=31% Similarity=0.448 Sum_probs=66.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
..|||+||||+++||.++|++|||+||++||||+|+++.|.+.|+.|++||++|+||.+|+.||.++..+
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~ 72 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAA 72 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccchh
Confidence 3699999999999999999999999999999999988889999999999999999999999999998654
No 6
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=4.8e-18 Score=156.46 Aligned_cols=68 Identities=34% Similarity=0.510 Sum_probs=64.5
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
+..+|+||||+++||..+||+|||+|+++||||||++ +.+.|..|+.||++||||++|..||.++.++
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~--~~ekfkei~~AyevLsd~ekr~~yD~~g~~~ 70 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD--AGEKFKEISQAYEVLSDPEKREIYDQYGEEG 70 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc--HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhh
Confidence 5689999999999999999999999999999999865 8899999999999999999999999999765
No 7
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=1.4e-16 Score=145.15 Aligned_cols=72 Identities=38% Similarity=0.519 Sum_probs=67.9
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK-HPQAKEAFGALAKAQQLLSDEQERDYILTQVHAAKG 111 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~-~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a~~ 111 (250)
..|||.||||++++|..+|+++||..++.||||||| +|.|.+.|+.|.+||+||+|+..|..||.++.....
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~ 76 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSS 76 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhccc
Confidence 579999999999999999999999999999999998 689999999999999999999999999999876543
No 8
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.72 E-value=9e-18 Score=119.30 Aligned_cols=62 Identities=44% Similarity=0.667 Sum_probs=59.2
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCch--HHHHHHHHHHHHHHcCCHHHHHHHH
Q 025594 42 NPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQ--AKEAFGALAKAQQLLSDEQERDYIL 103 (250)
Q Consensus 42 d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~--a~~~f~~I~~Ay~vL~dp~~R~~YD 103 (250)
|||+||||+++++..+|+++|+++++.+|||+++... +...|..|+.||++|+||..|..||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 6899999999999999999999999999999988755 8899999999999999999999998
No 9
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.70 E-value=1.6e-17 Score=157.20 Aligned_cols=69 Identities=33% Similarity=0.494 Sum_probs=64.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK-HPQAKEAFGALAKAQQLLSDEQERDYILTQVHA 108 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~-~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~ 108 (250)
..|||+||||+++||.++||+|||+|+++||||+++ ++.|.+.|..|+.||++|+||.+|+.||.++..
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~ 77 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRL 77 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhh
Confidence 469999999999999999999999999999999997 467899999999999999999999999999853
No 10
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.70 E-value=1.7e-17 Score=155.97 Aligned_cols=70 Identities=29% Similarity=0.440 Sum_probs=65.4
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK-HPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~-~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
..|||+||||+++||.++|++|||+|+++||||+++ ++.+.+.|+.|++||+||+||.+|..||.++..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g 73 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAG 73 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchh
Confidence 369999999999999999999999999999999997 4678899999999999999999999999988654
No 11
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.70 E-value=1.8e-17 Score=155.75 Aligned_cols=70 Identities=34% Similarity=0.463 Sum_probs=65.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
..|||+||||+++||.++|++|||+|++.||||+|+++.+.+.|+.|+.||++|+||.+|..||.++..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~ 72 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTD 72 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcc
Confidence 3699999999999999999999999999999999987888899999999999999999999999988643
No 12
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.69 E-value=2.8e-17 Score=154.81 Aligned_cols=70 Identities=34% Similarity=0.469 Sum_probs=66.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
..|||+||||+++||..+|++|||+|+++||||+|+++.+.+.|..|++||++|+||.+|..||.++..+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g 73 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAG 73 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhcccc
Confidence 4699999999999999999999999999999999988889999999999999999999999999988653
No 13
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.69 E-value=2.3e-17 Score=155.48 Aligned_cols=70 Identities=37% Similarity=0.465 Sum_probs=66.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
+.|||+||||+++||.++|++|||+|+++||||+++++.+.+.|..|+.||++|+||.+|..||.++..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~ 72 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAG 72 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCcc
Confidence 3699999999999999999999999999999999988889999999999999999999999999988643
No 14
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.69 E-value=3.1e-17 Score=154.71 Aligned_cols=70 Identities=40% Similarity=0.554 Sum_probs=66.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
+.|||+||||+++||.++|++|||+|+++||||+|+++.+.+.|+.|+.||++|+||.+|..||.++..+
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~ 71 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAA 71 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccc
Confidence 4699999999999999999999999999999999988889999999999999999999999999988654
No 15
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.69 E-value=3.3e-17 Score=149.37 Aligned_cols=70 Identities=34% Similarity=0.476 Sum_probs=66.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
..|||+||||+++||.++|++|||+|+++||||+++++.+.+.|..|++||++|+||.+|..||.++..+
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~ 72 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTA 72 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCcc
Confidence 3699999999999999999999999999999999988889999999999999999999999999988653
No 16
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.68 E-value=3.7e-17 Score=155.90 Aligned_cols=67 Identities=36% Similarity=0.502 Sum_probs=62.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
..|||+||||+++||.++||+|||+||++||||++++ .+.|..|++||++|+||.+|..||.++..+
T Consensus 27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~---~e~F~~i~~AYevLsD~~kR~~YD~~G~~~ 93 (421)
T PTZ00037 27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD---PEKFKEISRAYEVLSDPEKRKIYDEYGEEG 93 (421)
T ss_pred chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch---HHHHHHHHHHHHHhccHHHHHHHhhhcchh
Confidence 4699999999999999999999999999999999853 589999999999999999999999988643
No 17
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.68 E-value=3.4e-17 Score=154.23 Aligned_cols=69 Identities=42% Similarity=0.587 Sum_probs=65.5
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHA 108 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~ 108 (250)
..|||+||||+++||.++|++|||+|+++||||+++++.+.+.|..|++||++|+||.+|..||.++..
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~ 72 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHA 72 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCcc
Confidence 369999999999999999999999999999999998888899999999999999999999999998864
No 18
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.67 E-value=5e-17 Score=153.04 Aligned_cols=68 Identities=40% Similarity=0.499 Sum_probs=65.3
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHA 108 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~ 108 (250)
.|||+||||+++||.++|++|||+|+++||||+++++.+.+.|..|+.||++|+||.+|..||.++..
T Consensus 4 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~ 71 (376)
T PRK14280 4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHA 71 (376)
T ss_pred CChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCcc
Confidence 69999999999999999999999999999999998888999999999999999999999999998864
No 19
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.67 E-value=6.7e-17 Score=152.29 Aligned_cols=67 Identities=28% Similarity=0.428 Sum_probs=64.3
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVH 107 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~ 107 (250)
.|||+||||+++||.++|++|||+|+++||||+++++.+.+.|..|+.||++|+||.+|..||.++.
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~ 69 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGD 69 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCC
Confidence 6999999999999999999999999999999999888888999999999999999999999999875
No 20
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.66 E-value=7e-17 Score=151.54 Aligned_cols=69 Identities=35% Similarity=0.493 Sum_probs=64.6
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK-HPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~-~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
.|||+||||+++||.++|++|||+|+++||||+++ ++.+.+.|+.|+.||++|+||.+|..||.++..+
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~ 72 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTA 72 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcch
Confidence 69999999999999999999999999999999987 4668899999999999999999999999988654
No 21
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.66 E-value=9.1e-17 Score=151.76 Aligned_cols=69 Identities=35% Similarity=0.468 Sum_probs=64.7
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK-HPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~-~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
.|||+||||+++||.++|++|||+|+++||||+++ ++.+.+.|..|++||++|+||.+|..||.++..+
T Consensus 5 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~ 74 (386)
T PRK14277 5 KDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAA 74 (386)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccc
Confidence 69999999999999999999999999999999997 4678899999999999999999999999988643
No 22
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.66 E-value=4.5e-16 Score=157.77 Aligned_cols=71 Identities=18% Similarity=0.173 Sum_probs=67.0
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 39 FKLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 39 ~~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
...+||+||||+++||..+|++|||+||++||||+++++.+...|+.|+.||++||||.+|..||.+|..+
T Consensus 571 ~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~G 641 (1136)
T PTZ00341 571 PDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDG 641 (1136)
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccc
Confidence 36799999999999999999999999999999999987778899999999999999999999999998765
No 23
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.66 E-value=1.3e-16 Score=141.99 Aligned_cols=71 Identities=38% Similarity=0.562 Sum_probs=67.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKH-PQAKEAFGALAKAQQLLSDEQERDYILTQVHAAK 110 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~-~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a~ 110 (250)
.+|+|+||||+++|+.++|+++||+|++++|||++++ |.+.+.|..||.||.+|+||.+|..||.++..+-
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l 101 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGL 101 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHH
Confidence 5789999999999999999999999999999999986 8899999999999999999999999999987653
No 24
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.66 E-value=1.1e-16 Score=150.19 Aligned_cols=70 Identities=36% Similarity=0.516 Sum_probs=65.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK-HPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~-~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
..|||+||||+++||.++|++|||+|+++||||+++ ++.+.+.|..|+.||++|+||.+|..||.++..+
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g 73 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEG 73 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhcccc
Confidence 369999999999999999999999999999999997 4678899999999999999999999999998653
No 25
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.66 E-value=9.3e-17 Score=150.86 Aligned_cols=69 Identities=29% Similarity=0.423 Sum_probs=64.0
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKH--PQAKEAFGALAKAQQLLSDEQERDYILTQVHA 108 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~--~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~ 108 (250)
..|||+||||+++||.++|++|||+|+++||||+++. +.+.+.|..|+.||++|+||.+|..||.++..
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~ 73 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYV 73 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcc
Confidence 3699999999999999999999999999999999874 46788999999999999999999999998754
No 26
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=1.2e-16 Score=151.15 Aligned_cols=69 Identities=32% Similarity=0.518 Sum_probs=64.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK-HPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~-~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
.|||+||||+++||.++|++|||+|+++||||+++ ++.+.+.|..|++||++|+||.+|..||.++..+
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g 70 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDG 70 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccc
Confidence 48999999999999999999999999999999998 4678899999999999999999999999998643
No 27
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=1.5e-16 Score=150.36 Aligned_cols=65 Identities=38% Similarity=0.553 Sum_probs=61.6
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CchHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK-HPQAKEAFGALAKAQQLLSDEQERDYILT 104 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~-~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~ 104 (250)
..|||+||||+++||.++|++|||+|+++||||+++ ++.+.+.|..|++||++|+||.+|..||.
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~ 73 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDE 73 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHH
Confidence 369999999999999999999999999999999987 45688999999999999999999999998
No 28
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=1.5e-16 Score=149.74 Aligned_cols=70 Identities=37% Similarity=0.548 Sum_probs=64.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKH-PQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~-~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
..|||+||||+++||.++|++|||+|+++||||++++ +.+.+.|..|+.||++|+||.+|..||.++..+
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g 73 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAG 73 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccc
Confidence 4699999999999999999999999999999999974 567889999999999999999999999988643
No 29
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=2.3e-16 Score=148.98 Aligned_cols=70 Identities=41% Similarity=0.624 Sum_probs=65.4
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc----hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHP----QAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~----~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
+.|+|.+|+|+++||.++|++|||++|++|||||+.+| .|.+.|+.|..||+||+||.+|..||.++..+
T Consensus 8 e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qG 81 (546)
T KOG0718|consen 8 EIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQG 81 (546)
T ss_pred hhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcc
Confidence 45899999999999999999999999999999999865 47789999999999999999999999999865
No 30
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=2.4e-16 Score=148.63 Aligned_cols=68 Identities=40% Similarity=0.543 Sum_probs=63.7
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKH--PQAKEAFGALAKAQQLLSDEQERDYILTQVH 107 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~--~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~ 107 (250)
...||+||||..+++..+|+++||+|+|.||||+|++ ..+++.|+.|+.||+|||||..|.+||....
T Consensus 7 ~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hre 76 (508)
T KOG0717|consen 7 KRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHRE 76 (508)
T ss_pred hhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHH
Confidence 3579999999999999999999999999999999885 4688999999999999999999999998876
No 31
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.64 E-value=1.5e-16 Score=149.96 Aligned_cols=70 Identities=37% Similarity=0.481 Sum_probs=64.9
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK-HPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~-~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
..|||+||||+++||.++|++|||+|++.||||+++ ++.+.+.|..|++||++|+||.+|..||.++..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~ 73 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTAD 73 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCccc
Confidence 369999999999999999999999999999999997 4678899999999999999999999999988643
No 32
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.64 E-value=2.2e-16 Score=148.40 Aligned_cols=70 Identities=39% Similarity=0.538 Sum_probs=64.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK-HPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~-~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
..|||+||||+++||.++|++|||+|+++||||+++ ++.+.+.|..|+.||++|+||.+|..||.++..+
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 73 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAA 73 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccc
Confidence 369999999999999999999999999999999997 4668899999999999999999999999987643
No 33
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.63 E-value=2.8e-16 Score=146.75 Aligned_cols=68 Identities=37% Similarity=0.532 Sum_probs=64.4
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 42 NPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 42 d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
|||+||||+++||.++|++|||+|+++||||+++.+.+.+.|+.|+.||++|+||.+|..||.++..+
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~ 68 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAG 68 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhccccc
Confidence 79999999999999999999999999999999987778899999999999999999999999988653
No 34
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=3e-16 Score=148.73 Aligned_cols=69 Identities=36% Similarity=0.500 Sum_probs=64.6
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKH-PQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~-~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
.|||+||||+++||.++|++|||+|+++||||++++ +.+.+.|..|+.||++|+||.+|..||.++..+
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~ 72 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAG 72 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchh
Confidence 699999999999999999999999999999999974 567899999999999999999999999988654
No 35
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=3.7e-16 Score=147.07 Aligned_cols=68 Identities=32% Similarity=0.488 Sum_probs=65.2
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHA 108 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~ 108 (250)
.|||+||||+++||..+|++|||+|++.||||+++++.+.+.|..|++||++|+||.+|..||.++..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~ 70 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEA 70 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhcccc
Confidence 69999999999999999999999999999999998888999999999999999999999999998764
No 36
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=3.2e-16 Score=147.39 Aligned_cols=69 Identities=30% Similarity=0.400 Sum_probs=65.3
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
.|||+||||+++||.++|++|||+++++||||+++++.+.+.|..|+.||++|+||.+|..||.++..+
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~ 71 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDA 71 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccc
Confidence 699999999999999999999999999999999987778899999999999999999999999988643
No 37
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.62 E-value=5.7e-16 Score=142.17 Aligned_cols=67 Identities=30% Similarity=0.398 Sum_probs=64.3
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVH 107 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~ 107 (250)
.|||+||||++++|.++|++|||+|+++||||+++++.+.+.|..|++||++|+||.+|..||.++.
T Consensus 4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~ 70 (306)
T PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQ 70 (306)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhc
Confidence 6999999999999999999999999999999999888899999999999999999999999999864
No 38
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=4.7e-16 Score=146.15 Aligned_cols=68 Identities=35% Similarity=0.497 Sum_probs=65.2
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHA 108 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~ 108 (250)
+|||+||||+++||.++|++|||+|++++|||+++++.+.+.|..|++||++|+||.+|..||.++..
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~ 69 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTA 69 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCc
Confidence 58999999999999999999999999999999998888999999999999999999999999998864
No 39
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.61 E-value=1.1e-15 Score=106.92 Aligned_cols=57 Identities=44% Similarity=0.676 Sum_probs=53.7
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC--CchHHHHHHHHHHHHHHcCCHH
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK--HPQAKEAFGALAKAQQLLSDEQ 97 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~--~~~a~~~f~~I~~Ay~vL~dp~ 97 (250)
.|||+||||+++++.++|+++|+++++.+|||+++ .+.+...|..|+.||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 48999999999999999999999999999999998 5678899999999999999984
No 40
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.61 E-value=1.4e-15 Score=104.30 Aligned_cols=54 Identities=44% Similarity=0.751 Sum_probs=51.5
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHHHHHHHcCC
Q 025594 42 NPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKH-PQAKEAFGALAKAQQLLSD 95 (250)
Q Consensus 42 d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~-~~a~~~f~~I~~Ay~vL~d 95 (250)
|||+||||+++++.++|+++|+++++.+|||++.. ..+...|..|+.||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 79999999999999999999999999999999976 6788999999999999986
No 41
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=9.8e-16 Score=144.71 Aligned_cols=70 Identities=39% Similarity=0.476 Sum_probs=65.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK-HPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~-~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
..|||+||||+++||.++|++|||+|+++||||+++ ++.+.+.|+.|+.||++|+||.+|..||.++..+
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~ 74 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAG 74 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccc
Confidence 469999999999999999999999999999999997 4578899999999999999999999999988643
No 42
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.59 E-value=1.7e-15 Score=138.03 Aligned_cols=69 Identities=29% Similarity=0.389 Sum_probs=66.8
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
.|||+||||+++|+..+||+||++|+++||||.|.+..+...|..|..||++|+|+.+|..||..+..+
T Consensus 43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~ 111 (288)
T KOG0715|consen 43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ 111 (288)
T ss_pred cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence 499999999999999999999999999999999999999999999999999999999999999999865
No 43
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.59 E-value=1.5e-15 Score=142.43 Aligned_cols=68 Identities=29% Similarity=0.404 Sum_probs=63.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHP--QAKEAFGALAKAQQLLSDEQERDYILTQVHA 108 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~--~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~ 108 (250)
.|||+||||+++||..+|++|||+|++++|||+++.. .+.+.|+.|+.||++|+||.+|..||.++..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~ 72 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTV 72 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCc
Confidence 5999999999999999999999999999999999743 5889999999999999999999999998753
No 44
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.57 E-value=1.9e-15 Score=132.11 Aligned_cols=68 Identities=41% Similarity=0.545 Sum_probs=62.9
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC---CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK---HPQAKEAFGALAKAQQLLSDEQERDYILTQVH 107 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~---~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~ 107 (250)
..|+|.||||..+|+..+|++||+++++.+|||+++ ...+++.|+.|++||.||+|..+|+.||..+.
T Consensus 13 ~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~ 83 (264)
T KOG0719|consen 13 KKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGS 83 (264)
T ss_pred ccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCC
Confidence 469999999999999999999999999999999995 34688999999999999999999999997753
No 45
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.56 E-value=5.6e-15 Score=128.00 Aligned_cols=68 Identities=40% Similarity=0.554 Sum_probs=63.0
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKH-PQAKEAFGALAKAQQLLSDEQERDYILTQVH 107 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~-~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~ 107 (250)
.-|||+||||+|++|..+||++||+||+++||||+++ .+....|..|.+||..|+|+..|..|..++.
T Consensus 98 ~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~ 166 (230)
T KOG0721|consen 98 KFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGN 166 (230)
T ss_pred cCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCC
Confidence 4699999999999999999999999999999999987 4556778999999999999999999998875
No 46
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=7.9e-15 Score=138.50 Aligned_cols=75 Identities=37% Similarity=0.570 Sum_probs=69.2
Q ss_pred HHHHHHhcCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 025594 31 EVLRILSCFKLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVH 107 (250)
Q Consensus 31 ei~rll~~~~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~ 107 (250)
++-|++.+ +|+|.||||+++++.++||+.||+++.++|||||.++.|.++|..|.-||++|+|+.+|..||..+.
T Consensus 227 rl~re~~~--~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~ 301 (490)
T KOG0720|consen 227 RLSRELNI--LDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLELK 301 (490)
T ss_pred hhhhhhcC--CCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHHHH
Confidence 34455554 8999999999999999999999999999999999999999999999999999999999999998765
No 47
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.49 E-value=4.3e-14 Score=119.44 Aligned_cols=67 Identities=36% Similarity=0.510 Sum_probs=62.9
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCch--HHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQ--AKEAFGALAKAQQLLSDEQERDYILTQV 106 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~--a~~~f~~I~~Ay~vL~dp~~R~~YD~~~ 106 (250)
..+||.||||+++|+..+|+++||++++++|||+++... +.+.|..|+.||.+|+|+..|..||..+
T Consensus 5 ~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 5 LLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred hhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 479999999999999999999999999999999998543 8899999999999999999999999875
No 48
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.48 E-value=4.5e-14 Score=140.60 Aligned_cols=68 Identities=32% Similarity=0.487 Sum_probs=64.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHA 108 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~ 108 (250)
.|||+||||+++|+..+|+++||+|++++|||+++++.+...|..|+.||++|+||.+|..||.++..
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~a 69 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHD 69 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhccc
Confidence 58999999999999999999999999999999998888888999999999999999999999998753
No 49
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.41 E-value=4.7e-13 Score=113.53 Aligned_cols=67 Identities=24% Similarity=0.373 Sum_probs=58.2
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFD--ATPDDIKKQYRKLSLLVHPDKCKHPQ------AKEAFGALAKAQQLLSDEQERDYILTQVH 107 (250)
Q Consensus 41 ~d~Y~vLgv~~~--as~~eIkkaYRklsl~~HPDk~~~~~------a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~ 107 (250)
.|||+||||++. ++..+|+++|+++++.+|||++.+.. +...|..|+.||.+|+||..|..|+..+.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l~ 75 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLSLH 75 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHhc
Confidence 489999999996 67899999999999999999976432 45678999999999999999999986553
No 50
>PHA03102 Small T antigen; Reviewed
Probab=99.41 E-value=1.3e-13 Score=114.92 Aligned_cols=64 Identities=22% Similarity=0.250 Sum_probs=58.9
Q ss_pred CccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 025594 42 NPFEYLNLPFDA--TPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVHA 108 (250)
Q Consensus 42 d~Y~vLgv~~~a--s~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~ 108 (250)
..|+||||+++| |..+||+|||++++.+|||++++ .+.|+.|+.||++|+|+..|..||.++..
T Consensus 6 ~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~---~e~~k~in~Ay~~L~d~~~r~~yd~~g~~ 71 (153)
T PHA03102 6 ELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD---EEKMKELNTLYKKFRESVKSLRDLDGEED 71 (153)
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch---hHHHHHHHHHHHHHhhHHHhccccccCCc
Confidence 468999999999 99999999999999999999643 57999999999999999999999998854
No 51
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.41 E-value=5.7e-13 Score=112.53 Aligned_cols=67 Identities=28% Similarity=0.335 Sum_probs=57.8
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCch----HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFD--ATPDDIKKQYRKLSLLVHPDKCKHPQ----AKEAFGALAKAQQLLSDEQERDYILTQVH 107 (250)
Q Consensus 41 ~d~Y~vLgv~~~--as~~eIkkaYRklsl~~HPDk~~~~~----a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~ 107 (250)
.|||+||||++. ++..+|+++|+++++.+|||++.+.. +...|..|++||.+|+||.+|..|+..+.
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l~ 74 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLLQ 74 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHcc
Confidence 489999999986 67899999999999999999986432 23457899999999999999999977663
No 52
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.36 E-value=2.1e-12 Score=109.74 Aligned_cols=68 Identities=26% Similarity=0.343 Sum_probs=59.8
Q ss_pred CCCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFD--ATPDDIKKQYRKLSLLVHPDKCKHPQ------AKEAFGALAKAQQLLSDEQERDYILTQVH 107 (250)
Q Consensus 40 ~~d~Y~vLgv~~~--as~~eIkkaYRklsl~~HPDk~~~~~------a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~ 107 (250)
..|||++|||++. ++..+|+++||+++..+|||++.+.. +...|..||.||.+|+||.+|..|+..+.
T Consensus 3 ~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l~ 78 (173)
T PRK00294 3 TPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLALS 78 (173)
T ss_pred CCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 5799999999997 56799999999999999999986422 45679999999999999999999987764
No 53
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.35 E-value=2.5e-12 Score=109.65 Aligned_cols=69 Identities=25% Similarity=0.327 Sum_probs=58.9
Q ss_pred CCCCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCC-ch-----HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 025594 39 FKLNPFEYLNLPFD--ATPDDIKKQYRKLSLLVHPDKCKH-PQ-----AKEAFGALAKAQQLLSDEQERDYILTQVH 107 (250)
Q Consensus 39 ~~~d~Y~vLgv~~~--as~~eIkkaYRklsl~~HPDk~~~-~~-----a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~ 107 (250)
+..|||+||||++. ++..+|+++|+++++.+|||++.+ +. +...+..||.||.+|+||..|..|+..+.
T Consensus 4 ~~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~ 80 (176)
T PRK03578 4 LKDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLR 80 (176)
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhc
Confidence 45799999999985 678899999999999999999864 22 23446899999999999999999987654
No 54
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.25 E-value=4.2e-12 Score=112.67 Aligned_cols=71 Identities=28% Similarity=0.465 Sum_probs=66.7
Q ss_pred hcCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 025594 37 SCFKLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYILTQVH 107 (250)
Q Consensus 37 ~~~~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~ 107 (250)
=|...|+|+||||+.+++..+|.+|||+|++.+|||+++++.+...|..|..||++|.|...|..||-.+.
T Consensus 29 YCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydyald 99 (329)
T KOG0722|consen 29 YCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYALD 99 (329)
T ss_pred cccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHHhc
Confidence 46678999999999999999999999999999999999998888999999999999999999999997654
No 55
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.19 E-value=2.6e-11 Score=112.18 Aligned_cols=76 Identities=28% Similarity=0.388 Sum_probs=67.1
Q ss_pred HHHHHHh-cCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc----hHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 025594 31 EVLRILS-CFKLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHP----QAKEAFGALAKAQQLLSDEQERDYILTQ 105 (250)
Q Consensus 31 ei~rll~-~~~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~----~a~~~f~~I~~Ay~vL~dp~~R~~YD~~ 105 (250)
...||.. ....|||.||||..+|+..+|.+|||+++.+||||...+. .|...|.-|-.|-+||+||++|+.||..
T Consensus 383 ~Akrlkkqs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnG 462 (504)
T KOG0624|consen 383 RAKRLKKQSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNG 462 (504)
T ss_pred HHHHHHHHhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCC
Confidence 4457764 4468999999999999999999999999999999998864 4778899999999999999999999875
Q ss_pred H
Q 025594 106 V 106 (250)
Q Consensus 106 ~ 106 (250)
-
T Consensus 463 e 463 (504)
T KOG0624|consen 463 E 463 (504)
T ss_pred C
Confidence 3
No 56
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.13 E-value=7.5e-11 Score=106.59 Aligned_cols=55 Identities=29% Similarity=0.397 Sum_probs=49.9
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC--------chHHHHHHHHHHHHHHcCC
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKH--------PQAKEAFGALAKAQQLLSD 95 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~--------~~a~~~f~~I~~Ay~vL~d 95 (250)
.++|.||||++++|.++||++||+|++.+|||++.+ +.+.+.|+.|+.||++|+.
T Consensus 200 ~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred HhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999742 3477899999999999974
No 57
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.12 E-value=6e-11 Score=94.48 Aligned_cols=51 Identities=24% Similarity=0.357 Sum_probs=46.9
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcC
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLS 94 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~ 94 (250)
.++|+||||++++|.++|+++||++++.+|||+. ++...|..|+.||++|.
T Consensus 65 ~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkg---Gs~~~~~kIneAyevL~ 115 (116)
T PTZ00100 65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNG---GSTYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHh
Confidence 4899999999999999999999999999999984 45678999999999985
No 58
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.11 E-value=4e-11 Score=106.12 Aligned_cols=70 Identities=34% Similarity=0.488 Sum_probs=63.5
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHP--QAKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~--~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
..|+|.||||.++|+..+|++||+++++.+|||+++.+ .+...|..|.+||++|+||.+|..||.++..+
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~ 73 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEG 73 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccc
Confidence 36899999999999999999999999999999998876 45557999999999999999999999998743
No 59
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.08 E-value=1.3e-10 Score=109.36 Aligned_cols=78 Identities=33% Similarity=0.469 Sum_probs=67.3
Q ss_pred hHHHHHHH--------hcCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chHHHHHHHHHHHHHHcCCHHH
Q 025594 29 DNEVLRIL--------SCFKLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKH--PQAKEAFGALAKAQQLLSDEQE 98 (250)
Q Consensus 29 d~ei~rll--------~~~~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~--~~a~~~f~~I~~Ay~vL~dp~~ 98 (250)
+.+|.+.| .+...|||.||||+..++..+|+++||++++.+|||++.. ..+...|..|-.||.+|+||.+
T Consensus 353 s~e~r~~l~~A~~aLkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~k 432 (486)
T KOG0550|consen 353 DCEIRRTLREAQLALKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMK 432 (486)
T ss_pred ccchHHHHHHHHHHHHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHH
Confidence 44555555 3446899999999999999999999999999999999864 3567789999999999999999
Q ss_pred HHHHHHHH
Q 025594 99 RDYILTQV 106 (250)
Q Consensus 99 R~~YD~~~ 106 (250)
|..||..-
T Consensus 433 r~r~dsg~ 440 (486)
T KOG0550|consen 433 RVRFDSGQ 440 (486)
T ss_pred Hhhccccc
Confidence 99999754
No 60
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.03 E-value=8.5e-10 Score=93.83 Aligned_cols=67 Identities=25% Similarity=0.398 Sum_probs=58.3
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLPFD--ATPDDIKKQYRKLSLLVHPDKCKHPQ------AKEAFGALAKAQQLLSDEQERDYILTQVH 107 (250)
Q Consensus 41 ~d~Y~vLgv~~~--as~~eIkkaYRklsl~~HPDk~~~~~------a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~ 107 (250)
.|||++|||++. .+...++++|+.+...+|||+..+.+ +......||+||.+|.||.+|+.|-..+.
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~ 76 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN 76 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence 489999999986 78899999999999999999986432 34467899999999999999999977664
No 61
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.01 E-value=2.7e-10 Score=107.93 Aligned_cols=67 Identities=36% Similarity=0.602 Sum_probs=60.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC------chHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 025594 40 KLNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKH------PQAKEAFGALAKAQQLLSDEQERDYILTQV 106 (250)
Q Consensus 40 ~~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~------~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~ 106 (250)
..|||+||||+.+++..+||++||+|+.++||||.+. ....+.+..|++||..|+|...|..|..++
T Consensus 97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yG 169 (610)
T COG5407 97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYG 169 (610)
T ss_pred CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcC
Confidence 4699999999999999999999999999999999874 234578999999999999999999998774
No 62
>PHA02624 large T antigen; Provisional
Probab=98.97 E-value=4.8e-10 Score=110.69 Aligned_cols=59 Identities=22% Similarity=0.267 Sum_probs=55.3
Q ss_pred CCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCCHHHHHHH
Q 025594 41 LNPFEYLNLPFDA--TPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSDEQERDYI 102 (250)
Q Consensus 41 ~d~Y~vLgv~~~a--s~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~dp~~R~~Y 102 (250)
.++|+||||+++| +..+|++|||++++.+|||++ ++.+.|+.|+.||++|+|+.++..|
T Consensus 11 ~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKg---Gdeekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 11 KELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKG---GDEEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC---CcHHHHHHHHHHHHHHhcHHHhhhc
Confidence 5789999999999 999999999999999999995 3468999999999999999999998
No 63
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.87 E-value=6e-09 Score=87.31 Aligned_cols=56 Identities=25% Similarity=0.310 Sum_probs=48.6
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 025594 52 DATPDDIKKQYRKLSLLVHPDKCKHPQ------AKEAFGALAKAQQLLSDEQERDYILTQVH 107 (250)
Q Consensus 52 ~as~~eIkkaYRklsl~~HPDk~~~~~------a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~ 107 (250)
+.+..+|+++|++++..+|||++++.. +...|..||.||.+|+||.+|..|+..+.
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~ 63 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH 63 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 356789999999999999999976432 55789999999999999999999988775
No 64
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.61 E-value=3.1e-08 Score=89.01 Aligned_cols=71 Identities=27% Similarity=0.314 Sum_probs=61.6
Q ss_pred hcCCCCccccccCCC---CCCHHHHHHHHHHHHHHhCCCCCC---CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 025594 37 SCFKLNPFEYLNLPF---DATPDDIKKQYRKLSLLVHPDKCK---HPQAKEAFGALAKAQQLLSDEQERDYILTQVH 107 (250)
Q Consensus 37 ~~~~~d~Y~vLgv~~---~as~~eIkkaYRklsl~~HPDk~~---~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~ 107 (250)
.+...|+|.+|||+. -+++.+|.++.++.+..||||+.. +-+....|.+|++||++|+|+..|..||+...
T Consensus 39 ~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df 115 (379)
T COG5269 39 NWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDF 115 (379)
T ss_pred hhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccccc
Confidence 344579999999985 678899999999999999999974 34567899999999999999999999997644
No 65
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.97 E-value=7.8e-06 Score=72.32 Aligned_cols=54 Identities=22% Similarity=0.404 Sum_probs=50.1
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHH-HcC
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQ-LLS 94 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~-vL~ 94 (250)
+.||.||||..+|+.++++.+|..|+..+|||..........|..|.+||. ||+
T Consensus 47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq 101 (342)
T KOG0568|consen 47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQ 101 (342)
T ss_pred HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999887778889999999998 665
No 66
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=97.90 E-value=1.2e-05 Score=83.21 Aligned_cols=51 Identities=39% Similarity=0.608 Sum_probs=44.1
Q ss_pred CccccccCCC----CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcC
Q 025594 42 NPFEYLNLPF----DATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLS 94 (250)
Q Consensus 42 d~Y~vLgv~~----~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~ 94 (250)
+.|+||.|+- .-..+.|+++|++|+.+|||||| |...+.|..|++||+.|+
T Consensus 1282 ~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKN--PEGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1282 LAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKN--PEGREMFERVNKAYELLS 1336 (2235)
T ss_pred HHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCC--chHHHHHHHHHHHHHHHH
Confidence 6789998874 33457899999999999999996 566799999999999998
No 67
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.85 E-value=2.8e-05 Score=60.88 Aligned_cols=47 Identities=28% Similarity=0.412 Sum_probs=41.7
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcCC
Q 025594 46 YLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLSD 95 (250)
Q Consensus 46 vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~d 95 (250)
||||+|+++.+.||.++|++.+..|||+..+|- .-..||+|+++|..
T Consensus 61 IL~v~~s~~k~KikeaHrriM~~NHPD~GGSPY---lAsKINEAKdlLe~ 107 (112)
T KOG0723|consen 61 ILGVTPSLDKDKIKEAHRRIMLANHPDRGGSPY---LASKINEAKDLLEG 107 (112)
T ss_pred HhCCCccccHHHHHHHHHHHHHcCCCcCCCCHH---HHHHHHHHHHHHhc
Confidence 999999999999999999999999999977664 33469999999974
No 68
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.28 E-value=0.0005 Score=57.44 Aligned_cols=67 Identities=30% Similarity=0.454 Sum_probs=54.2
Q ss_pred CCccccccCC--CCCCHHHHHHHHHHHHHHhCCCCCCCc------hHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 025594 41 LNPFEYLNLP--FDATPDDIKKQYRKLSLLVHPDKCKHP------QAKEAFGALAKAQQLLSDEQERDYILTQVH 107 (250)
Q Consensus 41 ~d~Y~vLgv~--~~as~~eIkkaYRklsl~~HPDk~~~~------~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~ 107 (250)
.+||.++|.. +..+++-+.--|.-.+..+|||+..++ .+.+....|++||.+|.||-.|+.|-..+.
T Consensus 8 ~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl~ 82 (168)
T KOG3192|consen 8 SRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKLK 82 (168)
T ss_pred HHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 5899999754 455666677799999999999996532 467778999999999999999999976553
No 69
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=96.55 E-value=0.0025 Score=61.91 Aligned_cols=44 Identities=41% Similarity=0.555 Sum_probs=34.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCch--------HHHHHHHHHHHHHHc
Q 025594 50 PFDATPDDIKKQYRKLSLLVHPDKCKHPQ--------AKEAFGALAKAQQLL 93 (250)
Q Consensus 50 ~~~as~~eIkkaYRklsl~~HPDk~~~~~--------a~~~f~~I~~Ay~vL 93 (250)
..-++...||++||+.+|.+||||.+..+ +...|..|++||...
T Consensus 397 tDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f 448 (453)
T KOG0431|consen 397 TDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF 448 (453)
T ss_pred hhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence 34568999999999999999999987432 455677777777653
No 70
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.22 E-value=0.0093 Score=50.60 Aligned_cols=53 Identities=32% Similarity=0.441 Sum_probs=45.0
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC--------chHHHHHHHHHHHHHHc
Q 025594 41 LNPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKH--------PQAKEAFGALAKAQQLL 93 (250)
Q Consensus 41 ~d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~--------~~a~~~f~~I~~Ay~vL 93 (250)
.++|.+||+.+.++..+|+++|+++....|||+-.. ..+.+.++.|+.||..+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 789999999999999999999999999999998542 23567788888888653
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=94.91 E-value=0.024 Score=48.08 Aligned_cols=68 Identities=28% Similarity=0.331 Sum_probs=54.1
Q ss_pred CccccccCCCCCC--HHHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 025594 42 NPFEYLNLPFDAT--PDDIKKQYRKLSLLVHPDKCKHPQ------AKEAFGALAKAQQLLSDEQERDYILTQVHAA 109 (250)
Q Consensus 42 d~Y~vLgv~~~as--~~eIkkaYRklsl~~HPDk~~~~~------a~~~f~~I~~Ay~vL~dp~~R~~YD~~~~~a 109 (250)
|++.++|+++.+. .+.+...|+.+...+|||+....+ +-..+..++.||.+|.||-.|..|-..+..+
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~~g 77 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALADG 77 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhccc
Confidence 5667777776554 457899999999999999987543 2346889999999999999999998776633
No 72
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=92.99 E-value=0.17 Score=41.08 Aligned_cols=48 Identities=21% Similarity=0.247 Sum_probs=33.8
Q ss_pred cccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcC
Q 025594 44 FEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLS 94 (250)
Q Consensus 44 Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~ 94 (250)
..||||++.++.++|.+.|.+|-...+|++..+. -.=..|..|.+.|.
T Consensus 61 ~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGSf---YLQSKV~rAKErl~ 108 (127)
T PF03656_consen 61 RQILNVKEELSREEIQKRYKHLFKANDPSKGGSF---YLQSKVFRAKERLE 108 (127)
T ss_dssp HHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-H---HHHHHHHHHHHHHH
T ss_pred HHHcCCCCccCHHHHHHHHHHHHhccCCCcCCCH---HHHHHHHHHHHHHH
Confidence 4799999999999999999999999999985443 33345777777775
No 73
>PF12339 DNAJ_related: DNA-J related protein ; InterPro: IPR021059 This domain family is approximately 130 amino acids in length and contains a conserved YYLD sequence motif. The proteins have a C-terminal DNA-J domain PF00226 from PFAM and most of the sequences are annotated as DNA-J related proteins, other annotations include: DnaJ-class molecular chaperon and formate dehydrogenase; but there is currently no publications to support these annotations.
Probab=86.64 E-value=0.45 Score=38.87 Aligned_cols=35 Identities=29% Similarity=0.471 Sum_probs=28.7
Q ss_pred CCcCChHHHHHHHHHHHhhhhh--hHHHHHHHhcCCC
Q 025594 7 STAADDDLLLKSFFAEVSEVER--DNEVLRILSCFKL 41 (250)
Q Consensus 7 ~~~~~~~~~~~~f~~e~~~i~~--d~ei~rll~~~~~ 41 (250)
....+.+|.+++||.+|+++.. ..+|++||+.|-.
T Consensus 93 ~~~~~~~d~Lr~YYLDw~n~~~t~~~~V~~LL~~FW~ 129 (132)
T PF12339_consen 93 NNALDEDDPLREYYLDWQNYEETSEAEVERLLNSFWQ 129 (132)
T ss_pred cccccccchHHHHHccHHHHhhcCHHHHHHHHHHHHH
Confidence 3455678999999999999955 6889999987643
No 74
>PF13446 RPT: A repeated domain in UCH-protein
Probab=82.33 E-value=2 Score=29.92 Aligned_cols=26 Identities=19% Similarity=0.245 Sum_probs=23.4
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHH
Q 025594 42 NPFEYLNLPFDATPDDIKKQYRKLSL 67 (250)
Q Consensus 42 d~Y~vLgv~~~as~~eIkkaYRklsl 67 (250)
+.|.+|||+++++.+.|-.+|.....
T Consensus 6 ~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 6 EAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999998776
No 75
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=74.34 E-value=47 Score=34.92 Aligned_cols=19 Identities=21% Similarity=0.505 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHhHHHHh
Q 025594 192 WKRKREHEEQWEGTREQRV 210 (250)
Q Consensus 192 ~k~k~e~~k~wE~~Rd~RV 210 (250)
++.++..+-.||..|-.-+
T Consensus 403 ~ElEkqRqlewErar~qem 421 (1118)
T KOG1029|consen 403 EELEKQRQLEWERARRQEM 421 (1118)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3445555667886664433
No 76
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=70.61 E-value=4.4 Score=37.46 Aligned_cols=55 Identities=27% Similarity=0.397 Sum_probs=41.8
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCC-----CchHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 025594 52 DATPDDIKKQYRKLSLLVHPDKCK-----HPQAKEAFGALAKAQQLLSDEQERDYILTQV 106 (250)
Q Consensus 52 ~as~~eIkkaYRklsl~~HPDk~~-----~~~a~~~f~~I~~Ay~vL~dp~~R~~YD~~~ 106 (250)
.++...|..+|+..++.+||++.. .-...+.|..|.+||.+|++...|..+|..-
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~~ 62 (335)
T KOG0724|consen 3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSWD 62 (335)
T ss_pred cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhhh
Confidence 356788999999999999999863 1245567999999999999865544554443
No 77
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=66.03 E-value=11 Score=32.61 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=30.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHcC
Q 025594 50 PFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGALAKAQQLLS 94 (250)
Q Consensus 50 ~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I~~Ay~vL~ 94 (250)
+++||.++|..|+..+...|--|. ..-..|..||+.|.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd~-------~~~~~IEaAYD~IL 38 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGDE-------KSREAIEAAYDAIL 38 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCH-------HHHHHHHHHHHHHH
Confidence 578999999999999999984443 45566888988765
No 78
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=52.57 E-value=55 Score=24.34 Aligned_cols=45 Identities=22% Similarity=0.203 Sum_probs=30.5
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHH
Q 025594 42 NPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGAL 86 (250)
Q Consensus 42 d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~I 86 (250)
|--.++|++|-+++.+|+.+-++.+.++.--..++....++|..-
T Consensus 4 NIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~PS~~n~~AFe~A 48 (88)
T COG5552 4 NIKELFNFDPPATPVEVRDAALQFVRKLSGTTHPSAANAEAFEAA 48 (88)
T ss_pred chHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCcchhhHHHHHHH
Confidence 555788999999999999887666666544443333445566443
No 79
>cd00171 Sec7 Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor activity.
Probab=47.20 E-value=70 Score=27.20 Aligned_cols=95 Identities=18% Similarity=0.149 Sum_probs=49.6
Q ss_pred CChHHHHHHHHHHHhhhhhhHHHHHHHhcCCCCccccccCCCC-CCHHHHHH-HHHHHHH---HhCCCCCCCchHHHHHH
Q 025594 10 ADDDLLLKSFFAEVSEVERDNEVLRILSCFKLNPFEYLNLPFD-ATPDDIKK-QYRKLSL---LVHPDKCKHPQAKEAFG 84 (250)
Q Consensus 10 ~~~~~~~~~f~~e~~~i~~d~ei~rll~~~~~d~Y~vLgv~~~-as~~eIkk-aYRklsl---~~HPDk~~~~~a~~~f~ 84 (250)
...+++|+.|+.-+.----.++|+|||.+|..-||+- +-+.. .+.+.+-. +|-=+.| +++|+- ...-....|.
T Consensus 79 ~~i~~ALR~~l~~f~lpgE~Q~Idrile~Fs~~y~~~-Np~~~~~~~d~v~~l~~sllmLnTdlHn~~~-~~kmt~~~Fi 156 (185)
T cd00171 79 LRLDEALRKFLQSFRLPGEAQKIDRLLEKFSERYCEC-NPGIFSSSADAAYTLAYSIIMLNTDLHNPNV-KKKMTLEDFI 156 (185)
T ss_pred CCHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH-CCCCCCCChhHHHHHHHHHHHHhHHhcCccc-CCCCCHHHHH
Confidence 3456667766654433333588999998775544432 11111 25555443 3433322 334543 2222345555
Q ss_pred HHHHHH---HHcCCHHHHHHHHHHH
Q 025594 85 ALAKAQ---QLLSDEQERDYILTQV 106 (250)
Q Consensus 85 ~I~~Ay---~vL~dp~~R~~YD~~~ 106 (250)
...... ..+++......||.+.
T Consensus 157 ~~~~~~~~~~~~~~~~L~~iY~~I~ 181 (185)
T cd00171 157 KNLRGINDGEDFPREFLKELYDSIK 181 (185)
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHH
Confidence 444322 3577777777887764
No 80
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=47.16 E-value=74 Score=33.54 Aligned_cols=12 Identities=42% Similarity=0.664 Sum_probs=5.6
Q ss_pred HHHHHHHHHHHH
Q 025594 55 PDDIKKQYRKLS 66 (250)
Q Consensus 55 ~~eIkkaYRkls 66 (250)
+.--+..|+++-
T Consensus 190 p~~~klKY~QlF 201 (1118)
T KOG1029|consen 190 PQHNKLKYRQLF 201 (1118)
T ss_pred cchhhhHHHHHh
Confidence 333345555543
No 81
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=46.23 E-value=40 Score=26.68 Aligned_cols=24 Identities=25% Similarity=0.487 Sum_probs=20.7
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCC
Q 025594 52 DATPDDIKKQYRKLSLLVHPDKCK 75 (250)
Q Consensus 52 ~as~~eIkkaYRklsl~~HPDk~~ 75 (250)
..+..+++.+.|.+-+.+|||-..
T Consensus 5 ~~~~~~l~~aLr~Fy~~VHPDlF~ 28 (112)
T PF14687_consen 5 NLSSPDLRSALRPFYFAVHPDLFG 28 (112)
T ss_pred hhhhHHHHHHHHHHHHHhCCcccc
Confidence 456778999999999999999765
No 82
>PF07946 DUF1682: Protein of unknown function (DUF1682); InterPro: IPR012879 The members of this family are all hypothetical eukaryotic proteins of unknown function. One member (Q920S6 from SWISSPROT) is described as being an adipocyte-specific protein, but no evidence of this was found.
Probab=42.85 E-value=1.5e+02 Score=27.35 Aligned_cols=22 Identities=18% Similarity=0.217 Sum_probs=11.3
Q ss_pred cccCCCCCCHHHHHHHHHHHHH
Q 025594 46 YLNLPFDATPDDIKKQYRKLSL 67 (250)
Q Consensus 46 vLgv~~~as~~eIkkaYRklsl 67 (250)
|+.|-.-.....+++.+.-|++
T Consensus 128 V~Aiv~K~~~~~~r~~~~dLs~ 149 (321)
T PF07946_consen 128 VFAIVNKKEMKKLRKDNYDLSL 149 (321)
T ss_pred EEEEEcHHHHHHHHHhCcchhh
Confidence 3333333345556666666666
No 83
>smart00222 Sec7 Sec7 domain. Domain named after the S. cerevisiae SEC7 gene product, which is required for proper protein transport through the Golgi. The domain facilitates guanine nucleotide exchange on the small GTPases, ARFs (ADP ribosylation factors).
Probab=37.46 E-value=1.1e+02 Score=25.92 Aligned_cols=97 Identities=19% Similarity=0.145 Sum_probs=51.6
Q ss_pred cCChHHHHHHHHHHHhhhhhhHHHHHHHhcCCCCcccccc-CCCCCCHHHHH-HHHHHHHHH---hCCCCCCCchHHHHH
Q 025594 9 AADDDLLLKSFFAEVSEVERDNEVLRILSCFKLNPFEYLN-LPFDATPDDIK-KQYRKLSLL---VHPDKCKHPQAKEAF 83 (250)
Q Consensus 9 ~~~~~~~~~~f~~e~~~i~~d~ei~rll~~~~~d~Y~vLg-v~~~as~~eIk-kaYRklsl~---~HPDk~~~~~a~~~f 83 (250)
...++++|+.|+.-..---..++|+||+.+|...||+-=- +....+.+.|- -+|--+.|. ++|.- ...-..+.|
T Consensus 79 ~~~i~~ALR~~l~~f~lpgE~q~Idrile~Fs~~y~~~N~~~~~~~~~d~~y~l~~s~lmLnTdlhn~~~-k~kmt~~~F 157 (187)
T smart00222 79 AKDLDQALREFLESFRLPGEAQKIDRLLEAFSSRYCECNPSVFSKLNADAAYTLAYSLIMLNTDLHNPNV-KKKMTLEDF 157 (187)
T ss_pred CCcHHHHHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHCCCccCCCChhHHHHHHHHHHHHhHHhcCCcc-CCCCCHHHH
Confidence 3456677777765543333368899999877655554321 11111444443 345443333 23322 233345566
Q ss_pred HHHHHHH---HHcCCHHHHHHHHHHH
Q 025594 84 GALAKAQ---QLLSDEQERDYILTQV 106 (250)
Q Consensus 84 ~~I~~Ay---~vL~dp~~R~~YD~~~ 106 (250)
....... ..|.+......||.+.
T Consensus 158 i~~~~~~~~~~~~~~~~L~~iY~~I~ 183 (187)
T smart00222 158 IKNVRGSNDGEDLPREFLEELYDSIK 183 (187)
T ss_pred HHHHhccCCCCCCCHHHHHHHHHHHH
Confidence 5555443 4577777777777654
No 84
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=32.30 E-value=1.9e+02 Score=21.53 Aligned_cols=44 Identities=20% Similarity=0.093 Sum_probs=32.1
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHH
Q 025594 42 NPFEYLNLPFDATPDDIKKQYRKLSLLVHPDKCKHPQAKEAFGA 85 (250)
Q Consensus 42 d~Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~~~~a~~~f~~ 85 (250)
|--.+.|+.|-+|.++|..+-.+.+.++.=-..++....++|..
T Consensus 4 nI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~an~eaF~~ 47 (78)
T PF10041_consen 4 NIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPSAANAEAFDR 47 (78)
T ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcchhhHHHHHH
Confidence 34456688899999999999888888886665555555566644
No 85
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=31.93 E-value=63 Score=26.29 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=27.8
Q ss_pred cccccCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 025594 44 FEYLNLPFDATPDDIKKQYRKLSLLVHPDKCK 75 (250)
Q Consensus 44 Y~vLgv~~~as~~eIkkaYRklsl~~HPDk~~ 75 (250)
-.||+|++..+.++|.+.|-.|-....+.+..
T Consensus 62 ~qILnV~~~ln~eei~k~yehLFevNdkskGG 93 (132)
T KOG3442|consen 62 QQILNVKEPLNREEIEKRYEHLFEVNDKSKGG 93 (132)
T ss_pred hhHhCCCCCCCHHHHHHHHHHHHhccCcccCc
Confidence 46999999999999999999998888777654
No 86
>PF06637 PV-1: PV-1 protein (PLVAP); InterPro: IPR009538 This family consists of several PV-1 (PLVAP) proteins, which seem to be specific to mammals. PV-1 is a novel protein component of the endothelial fenestral and stomatal diaphragms []. The function of this family is unknown.
Probab=31.63 E-value=4.9e+02 Score=25.27 Aligned_cols=45 Identities=18% Similarity=0.287 Sum_probs=32.3
Q ss_pred HHHHHHHhhhhhhHHHHHHHhcCCCCccccccCCCCCCHHHHHHHHHHH
Q 025594 17 KSFFAEVSEVERDNEVLRILSCFKLNPFEYLNLPFDATPDDIKKQYRKL 65 (250)
Q Consensus 17 ~~f~~e~~~i~~d~ei~rll~~~~~d~Y~vLgv~~~as~~eIkkaYRkl 65 (250)
.-|-.++..+.+|.-|-|.|..++.++|--||-. ..-|+++-..+
T Consensus 231 dk~~~~l~~lWRDSii~R~Ld~~~y~ly~~l~~e----l~siRr~Cd~l 275 (442)
T PF06637_consen 231 DKFETDLRNLWRDSIIPRSLDNLGYSLYHPLGPE----LESIRRTCDHL 275 (442)
T ss_pred HHHHHHHHHHHHHHHHhhhhhcCCcccCCCCcch----HHHHHHHHhhc
Confidence 3577888899999999999998888878665433 55566554443
No 87
>PF12108 SF3a60_bindingd: Splicing factor SF3a60 binding domain; InterPro: IPR021966 This domain is found in eukaryotes. This domain is about 30 amino acids in length. This domain has a single completely conserved residue Y that may be functionally important. SF3a60 makes up the SF3a complex with SF3a66 and SF3a120. This domain is the binding site of SF3a60 for SF3a120. The SF3a complex is part of the spliceosome, a protein complex involved in splicing mRNA after transcription. ; PDB: 2DT7_A.
Probab=30.93 E-value=39 Score=20.26 Aligned_cols=17 Identities=12% Similarity=0.374 Sum_probs=11.8
Q ss_pred ChHHHHHHHHHHHhhhh
Q 025594 11 DDDLLLKSFFAEVSEVE 27 (250)
Q Consensus 11 ~~~~~~~~f~~e~~~i~ 27 (250)
+..+.|.+||.-+++|.
T Consensus 4 s~~d~f~eFY~rlk~Ik 20 (28)
T PF12108_consen 4 SGGDPFSEFYERLKEIK 20 (28)
T ss_dssp -S--HHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHH
Confidence 45688999999888774
No 88
>KOG3026 consensus Splicing factor SPF30 [RNA processing and modification]
Probab=30.01 E-value=55 Score=29.50 Aligned_cols=21 Identities=29% Similarity=0.593 Sum_probs=15.2
Q ss_pred HHHHHhHHHHhhhHHHhhhcc
Q 025594 200 EQWEGTREQRVSSWRDFMKTG 220 (250)
Q Consensus 200 k~wE~~Rd~RV~sWr~f~~~~ 220 (250)
+.-|.-|+.-=++|.+|+..+
T Consensus 188 kele~~~e~~kn~WqqFntr~ 208 (262)
T KOG3026|consen 188 KELEAEREASKNSWQQFNTRA 208 (262)
T ss_pred HhHHHHHhhhhhHHHHHHHHh
Confidence 444556777779999999654
No 89
>KOG1144 consensus Translation initiation factor 5B (eIF-5B) [Translation, ribosomal structure and biogenesis]
Probab=27.59 E-value=3.5e+02 Score=28.89 Aligned_cols=7 Identities=14% Similarity=0.406 Sum_probs=2.8
Q ss_pred HHHHHhc
Q 025594 32 VLRILSC 38 (250)
Q Consensus 32 i~rll~~ 38 (250)
.+.||..
T Consensus 112 ~dkllas 118 (1064)
T KOG1144|consen 112 LDKLLAS 118 (1064)
T ss_pred hHHHhhh
Confidence 3344433
No 90
>PRK13798 putative OHCU decarboxylase; Provisional
Probab=26.20 E-value=2.6e+02 Score=23.55 Aligned_cols=54 Identities=17% Similarity=0.167 Sum_probs=32.7
Q ss_pred HHHhhhhhhHHHHHHHhcCCCCcccccc---CCCCCCHHHHHHHHHH-----------HHHHhCCCCCC
Q 025594 21 AEVSEVERDNEVLRILSCFKLNPFEYLN---LPFDATPDDIKKQYRK-----------LSLLVHPDKCK 75 (250)
Q Consensus 21 ~e~~~i~~d~ei~rll~~~~~d~Y~vLg---v~~~as~~eIkkaYRk-----------lsl~~HPDk~~ 75 (250)
.+++.+..+.-+..+..|+...+. +-. -.|.+|...+..+... -++..|||-..
T Consensus 9 ~~~N~l~~~~f~~~l~~~~e~~~W-a~~~~~~RPf~s~~~L~~a~~~~~~~~~~~~~~~~l~~HP~lg~ 76 (166)
T PRK13798 9 AEFNALPERQAVHALFECCHSTAW-ARRLAAARPFADHDALLAAADEALAGLSEADIDEALAGHPRIGE 76 (166)
T ss_pred HHHhCCCHHHHHHHHHHHhcChHH-HHHHHHcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHhCCcccC
Confidence 445555556666666666665555 322 2456676666665544 35678999864
No 91
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=25.01 E-value=8.8e+02 Score=26.05 Aligned_cols=9 Identities=33% Similarity=0.468 Sum_probs=3.4
Q ss_pred HHHHHHcCC
Q 025594 87 AKAQQLLSD 95 (250)
Q Consensus 87 ~~Ay~vL~d 95 (250)
.++..+|.+
T Consensus 840 ~K~~~l~kn 848 (1259)
T KOG0163|consen 840 RKINALLKN 848 (1259)
T ss_pred HHHHHHHHh
Confidence 333333333
No 92
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=24.95 E-value=68 Score=15.83 Aligned_cols=13 Identities=31% Similarity=0.376 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHcC
Q 025594 82 AFGALAKAQQLLS 94 (250)
Q Consensus 82 ~f~~I~~Ay~vL~ 94 (250)
.|..|..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 3667778887764
No 93
>PF06936 Selenoprotein_S: Selenoprotein S (SelS); InterPro: IPR009703 This family consists of several mammalian selenoprotein S (SelS) sequences. SelS is a plasma membrane protein and is present in a variety of tissues and cell types. These proteins are involved in the degradation process of misfolded endoplasmic reticulum (ER) luminal proteins which participate in the transfer of misfolded proteins from the ER to the cytosol, where they are destroyed by the proteasome in a ubiquitin-dependent manner []. They probably serve as a linker between DER1, which mediates the retro-translocation of misfolded proteins into the cytosol, and the ATPase complex VCP, which mediates the translocation and ubiquitination.; GO: 0008430 selenium binding, 0006886 intracellular protein transport, 0030176 integral to endoplasmic reticulum membrane; PDB: 2Q2F_A.
Probab=23.35 E-value=4.9e+02 Score=22.51 Aligned_cols=17 Identities=18% Similarity=0.519 Sum_probs=7.7
Q ss_pred HhHHHHhhhHHHhhhcc
Q 025594 204 GTREQRVSSWRDFMKTG 220 (250)
Q Consensus 204 ~~Rd~RV~sWr~f~~~~ 220 (250)
+.|..=+..|.+++.++
T Consensus 113 EKRrqkie~we~~q~Gk 129 (190)
T PF06936_consen 113 EKRRQKIEMWESMQEGK 129 (190)
T ss_dssp HHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44555567788887654
No 94
>KOG0906 consensus Phosphatidylinositol 3-kinase VPS34, involved in signal transduction [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=21.39 E-value=1.7e+02 Score=30.42 Aligned_cols=55 Identities=18% Similarity=0.278 Sum_probs=42.1
Q ss_pred CCCccccccCCC---------CCCHHHHHHHHHH---HHHHhCCCCCC----CchHHHHHHHHHHHHHHcC
Q 025594 40 KLNPFEYLNLPF---------DATPDDIKKQYRK---LSLLVHPDKCK----HPQAKEAFGALAKAQQLLS 94 (250)
Q Consensus 40 ~~d~Y~vLgv~~---------~as~~eIkkaYRk---lsl~~HPDk~~----~~~a~~~f~~I~~Ay~vL~ 94 (250)
.+.||.||-.++ +.+...|...|.- ....+|||.|. .+..-+.|..-...|.|+.
T Consensus 623 kLtpYkVLatg~~eG~vefI~s~~la~Ils~~~~I~~ylke~~p~e~ap~gi~~~v~dnfVkScaGYsVit 693 (843)
T KOG0906|consen 623 KLTPYKVLATGPKEGFVEFIPSKPLARILSEYHSILMYLKEDRPDENAPFGISPEVMDNFVKSCAGYSVIT 693 (843)
T ss_pred cceeeEEeccCCCcccEEeecCCcHHHHHHHHHHHHHHHHhhCCCcCCCCCCChhHHHHHHHhhccceeee
Confidence 478999997764 5678899999876 55678999964 3566777888888888743
No 95
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=21.32 E-value=1e+03 Score=25.54 Aligned_cols=6 Identities=33% Similarity=0.789 Sum_probs=2.7
Q ss_pred CCCCCC
Q 025594 228 IRPPKL 233 (250)
Q Consensus 228 ~~ppk~ 233 (250)
+-||+.
T Consensus 1041 m~P~k~ 1046 (1259)
T KOG0163|consen 1041 MGPNKM 1046 (1259)
T ss_pred CCCccc
Confidence 345553
Done!