BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 025596
         (250 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O50533|HEMH_STRCO Probable ferrochelatase OS=Streptomyces coelicolor (strain ATCC
           BAA-471 / A3(2) / M145) GN=hemH PE=3 SV=1
          Length = 375

 Score = 36.6 bits (83), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 20/99 (20%)

Query: 157 IKKEVLKKGGQ-------LAAINLESRAALLAAKQGFAGAATK---YLGLRNMVALLGPV 206
           I KE LK+ GQ       ++ IN ++RA L A ++ FA        Y G RN        
Sbjct: 40  IPKERLKEVGQHYFLFGGVSPINDQNRALLDALRKDFAEHGLDLPVYWGNRN-------- 91

Query: 207 LWGTFLADVVIQMLGTDYARILR-AIYAFAQIRITRTYR 244
            W  +L D + +M+G    RIL  A  A+A     R YR
Sbjct: 92  -WAPYLTDTLREMVGDGRRRILVLATSAYASYSGCRQYR 129


>sp|Q820C9|LNT_NITEU Apolipoprotein N-acyltransferase OS=Nitrosomonas europaea (strain
           ATCC 19718 / NBRC 14298) GN=lnt PE=3 SV=1
          Length = 497

 Score = 30.8 bits (68), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)

Query: 141 MRNL-SGKFFLEAANYQIKKEVLKKGGQLAAINLESRAALLAAKQGFAGAATKYLGLRN 198
           MR L +G++ L A N  +   + ++G  L  +++ + A L +  QGF G AT Y+   N
Sbjct: 414 MRALETGRYMLRATNTGVTAIIDERGRVLEQLDMFTTAGLHSTAQGF-GGATPYVRFGN 471


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.134    0.379 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,916,252
Number of Sequences: 539616
Number of extensions: 2903202
Number of successful extensions: 7728
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 7726
Number of HSP's gapped (non-prelim): 13
length of query: 250
length of database: 191,569,459
effective HSP length: 115
effective length of query: 135
effective length of database: 129,513,619
effective search space: 17484338565
effective search space used: 17484338565
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)