Query 025598
Match_columns 250
No_of_seqs 220 out of 1807
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 07:28:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025598.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025598hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 1.2E-63 2.7E-68 408.5 18.0 244 6-249 2-245 (303)
2 KOG0373 Serine/threonine speci 100.0 2.9E-59 6.2E-64 377.5 15.1 245 5-249 4-248 (306)
3 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 8.7E-58 1.9E-62 395.9 25.1 243 7-249 2-244 (285)
4 cd07420 MPP_RdgC Drosophila me 100.0 2.3E-57 5.1E-62 397.2 26.9 246 3-249 3-283 (321)
5 PTZ00239 serine/threonine prot 100.0 1.5E-57 3.3E-62 396.5 25.5 244 6-249 2-245 (303)
6 PTZ00480 serine/threonine-prot 100.0 4.1E-56 9E-61 388.8 24.4 243 6-249 10-261 (320)
7 cd07416 MPP_PP2B PP2B, metallo 100.0 9E-56 2E-60 386.9 26.4 243 6-249 2-252 (305)
8 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 1.7E-55 3.6E-60 383.0 23.1 242 7-249 2-252 (293)
9 PTZ00244 serine/threonine-prot 100.0 3.2E-55 7E-60 380.8 23.9 242 7-249 4-254 (294)
10 cd07417 MPP_PP5_C PP5, C-termi 100.0 7E-55 1.5E-59 382.2 24.4 246 3-249 12-263 (316)
11 smart00156 PP2Ac Protein phosp 100.0 3.6E-54 7.7E-59 371.8 24.5 229 20-249 1-230 (271)
12 cd07418 MPP_PP7 PP7, metalloph 100.0 1.7E-52 3.7E-57 371.7 26.6 247 3-249 8-315 (377)
13 KOG0374 Serine/threonine speci 100.0 2.1E-53 4.5E-58 372.9 20.2 231 19-249 31-263 (331)
14 cd07419 MPP_Bsu1_C Arabidopsis 100.0 2.6E-51 5.7E-56 360.2 24.2 233 17-249 18-272 (311)
15 KOG0371 Serine/threonine prote 100.0 3.8E-52 8.2E-57 343.0 14.2 247 4-250 17-263 (319)
16 KOG0375 Serine-threonine phosp 100.0 5.2E-48 1.1E-52 331.2 15.8 239 8-247 49-295 (517)
17 KOG0377 Protein serine/threoni 100.0 1.9E-44 4.1E-49 315.9 14.1 246 3-249 117-392 (631)
18 KOG0376 Serine-threonine phosp 100.0 8.8E-35 1.9E-39 259.6 9.7 246 3-249 166-417 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.1E-32 2.4E-37 232.0 19.2 186 50-246 1-196 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 1.9E-28 4.1E-33 209.2 17.5 123 47-171 1-146 (245)
21 PHA02239 putative protein phos 100.0 1.7E-27 3.7E-32 201.6 16.8 137 47-199 1-183 (235)
22 TIGR00668 apaH bis(5'-nucleosy 100.0 7.5E-28 1.6E-32 206.4 13.0 140 47-190 1-146 (279)
23 cd07413 MPP_PA3087 Pseudomonas 100.0 3E-27 6.6E-32 199.0 16.2 116 50-168 2-143 (222)
24 PRK00166 apaH diadenosine tetr 100.0 2.7E-27 5.8E-32 204.5 15.7 133 47-183 1-139 (275)
25 cd07425 MPP_Shelphs Shewanella 99.9 2.7E-27 5.9E-32 197.3 13.5 162 50-245 1-182 (208)
26 cd07421 MPP_Rhilphs Rhilph pho 99.9 6.8E-27 1.5E-31 200.7 15.7 148 47-199 2-241 (304)
27 cd07423 MPP_PrpE Bacillus subt 99.9 1.1E-26 2.3E-31 197.3 16.6 122 47-170 1-142 (234)
28 cd07422 MPP_ApaH Escherichia c 99.9 4.2E-27 9E-32 201.3 13.6 133 49-185 1-139 (257)
29 PRK11439 pphA serine/threonine 99.9 1.2E-26 2.6E-31 194.9 15.0 117 46-168 16-146 (218)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 7E-25 1.5E-29 182.8 16.5 119 47-171 1-133 (207)
31 PRK09968 serine/threonine-spec 99.9 4.9E-24 1.1E-28 179.0 15.6 117 46-168 14-144 (218)
32 PF00149 Metallophos: Calcineu 99.6 6E-14 1.3E-18 110.1 13.2 160 47-241 1-199 (200)
33 TIGR00040 yfcE phosphoesterase 99.4 1.8E-12 4E-17 103.3 11.9 63 47-118 1-64 (158)
34 cd00841 MPP_YfcE Escherichia c 99.4 1.5E-12 3.3E-17 103.2 11.3 84 48-169 1-87 (155)
35 PF12850 Metallophos_2: Calcin 99.4 3.4E-12 7.3E-17 100.7 10.8 123 47-244 1-123 (156)
36 cd07379 MPP_239FB Homo sapiens 99.4 3.7E-12 8E-17 98.9 9.8 118 48-246 1-120 (135)
37 cd07397 MPP_DevT Myxococcus xa 99.3 2.3E-11 5.1E-16 102.7 14.0 158 48-242 2-208 (238)
38 PRK09453 phosphodiesterase; Pr 99.3 4.2E-12 9E-17 103.7 7.6 69 47-119 1-77 (182)
39 cd07392 MPP_PAE1087 Pyrobaculu 99.2 1.3E-10 2.7E-15 94.5 10.8 65 49-119 1-66 (188)
40 cd07388 MPP_Tt1561 Thermus the 99.1 1.3E-10 2.7E-15 97.9 7.8 72 46-118 4-75 (224)
41 cd07394 MPP_Vps29 Homo sapiens 99.1 1E-09 2.2E-14 89.4 12.0 62 48-118 1-65 (178)
42 cd00838 MPP_superfamily metall 99.1 2.1E-09 4.6E-14 81.0 11.3 117 50-246 1-119 (131)
43 PRK05340 UDP-2,3-diacylglucosa 99.0 6.6E-09 1.4E-13 88.6 13.0 71 47-119 1-84 (241)
44 cd07404 MPP_MS158 Microscilla 99.0 5.8E-10 1.2E-14 89.5 6.1 67 49-118 1-68 (166)
45 cd07400 MPP_YydB Bacillus subt 99.0 1.5E-08 3.2E-13 79.2 12.0 117 49-246 1-129 (144)
46 cd07403 MPP_TTHA0053 Thermus t 98.9 1.1E-08 2.4E-13 78.9 10.5 107 50-246 1-107 (129)
47 COG2129 Predicted phosphoester 98.8 1.5E-07 3.2E-12 78.1 13.4 161 46-247 3-192 (226)
48 TIGR01854 lipid_A_lpxH UDP-2,3 98.8 1.3E-08 2.8E-13 86.2 6.3 68 49-118 1-81 (231)
49 cd07402 MPP_GpdQ Enterobacter 98.8 8.4E-08 1.8E-12 81.2 10.8 67 48-118 1-83 (240)
50 PRK11340 phosphodiesterase Yae 98.7 3.1E-08 6.7E-13 85.9 7.4 71 46-118 49-125 (271)
51 cd07385 MPP_YkuE_C Bacillus su 98.7 2.9E-08 6.2E-13 83.1 6.3 72 46-119 1-77 (223)
52 cd07399 MPP_YvnB Bacillus subt 98.7 1.6E-07 3.5E-12 78.7 10.2 148 48-242 2-161 (214)
53 COG0622 Predicted phosphoester 98.7 2.5E-07 5.5E-12 74.7 10.2 65 47-119 2-66 (172)
54 PRK11148 cyclic 3',5'-adenosin 98.6 7.2E-07 1.6E-11 77.5 13.6 72 45-118 13-98 (275)
55 cd07383 MPP_Dcr2 Saccharomyces 98.6 3.1E-07 6.7E-12 75.9 10.6 70 47-116 3-87 (199)
56 TIGR03729 acc_ester putative p 98.5 2.4E-07 5.1E-12 78.8 7.0 68 48-118 1-74 (239)
57 cd07395 MPP_CSTP1 Homo sapiens 98.5 5.4E-06 1.2E-10 71.3 15.3 72 47-118 5-99 (262)
58 TIGR00619 sbcd exonuclease Sbc 98.5 4E-07 8.7E-12 78.2 7.3 72 47-118 1-88 (253)
59 cd07396 MPP_Nbla03831 Homo sap 98.4 6.4E-07 1.4E-11 77.5 7.9 72 48-119 2-87 (267)
60 cd07401 MPP_TMEM62_N Homo sapi 98.4 5.7E-06 1.2E-10 71.2 13.4 70 49-118 2-89 (256)
61 cd07398 MPP_YbbF-LpxH Escheric 98.4 5.1E-07 1.1E-11 75.2 6.6 70 50-120 1-84 (217)
62 PHA02546 47 endonuclease subun 98.3 1.1E-06 2.5E-11 78.6 7.2 72 47-118 1-89 (340)
63 PRK04036 DNA polymerase II sma 98.3 2.1E-06 4.5E-11 80.7 8.1 115 46-167 243-388 (504)
64 COG2908 Uncharacterized protei 98.3 3.5E-06 7.6E-11 70.6 8.1 170 50-244 1-201 (237)
65 cd07390 MPP_AQ1575 Aquifex aeo 98.3 2.3E-06 4.9E-11 68.9 6.7 67 49-120 1-84 (168)
66 cd00840 MPP_Mre11_N Mre11 nucl 98.2 2.8E-06 6.2E-11 70.7 6.8 72 48-120 1-91 (223)
67 cd07391 MPP_PF1019 Pyrococcus 98.2 3E-06 6.6E-11 68.4 6.4 57 62-119 30-89 (172)
68 TIGR00583 mre11 DNA repair pro 98.1 8.2E-06 1.8E-10 74.5 7.9 74 46-119 3-124 (405)
69 TIGR00024 SbcD_rel_arch putati 98.1 9.5E-06 2.1E-10 68.5 7.8 69 47-119 15-103 (225)
70 cd07393 MPP_DR1119 Deinococcus 98.1 6E-06 1.3E-10 70.0 6.6 66 49-118 1-84 (232)
71 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.1 5.9E-06 1.3E-10 71.3 6.5 70 49-118 1-86 (262)
72 COG1409 Icc Predicted phosphoh 98.1 1.4E-05 3.1E-10 69.0 8.1 73 47-121 1-81 (301)
73 PF14582 Metallophos_3: Metall 98.1 3.8E-05 8.2E-10 64.0 9.9 73 46-119 5-103 (255)
74 cd08165 MPP_MPPE1 human MPPE1 98.1 6.5E-06 1.4E-10 65.6 5.2 51 69-119 34-90 (156)
75 PRK10966 exonuclease subunit S 98.0 1.1E-05 2.4E-10 73.9 6.8 71 47-118 1-87 (407)
76 cd07380 MPP_CWF19_N Schizosacc 97.9 0.00019 4E-09 56.8 10.4 119 50-241 1-121 (150)
77 COG0639 ApaH Diadenosine tetra 97.9 1.5E-05 3.3E-10 61.4 4.1 125 123-248 6-139 (155)
78 COG1408 Predicted phosphohydro 97.8 3.4E-05 7.3E-10 67.4 6.2 73 46-120 44-120 (284)
79 cd07386 MPP_DNA_pol_II_small_a 97.8 5.6E-05 1.2E-09 64.4 7.1 68 50-119 2-95 (243)
80 PF06874 FBPase_2: Firmicute f 97.8 0.0004 8.6E-09 65.6 12.4 45 71-120 182-226 (640)
81 COG4186 Predicted phosphoester 97.8 8.8E-05 1.9E-09 58.2 6.6 67 49-119 6-87 (186)
82 cd00839 MPP_PAPs purple acid p 97.7 3.6E-05 7.8E-10 67.1 4.6 71 46-120 4-83 (294)
83 COG0420 SbcD DNA repair exonuc 97.7 0.00011 2.4E-09 67.0 7.6 73 47-119 1-89 (390)
84 cd08163 MPP_Cdc1 Saccharomyces 97.6 0.0035 7.6E-08 54.0 15.2 25 216-240 202-226 (257)
85 cd08166 MPP_Cdc1_like_1 unchar 97.6 0.00015 3.3E-09 59.6 5.8 50 70-119 39-94 (195)
86 cd00845 MPP_UshA_N_like Escher 97.5 0.00024 5.2E-09 60.6 6.4 66 48-118 2-82 (252)
87 cd07384 MPP_Cdc1_like Saccharo 97.4 0.00037 8E-09 56.3 6.5 52 68-119 40-101 (171)
88 COG1407 Predicted ICC-like pho 97.4 0.00039 8.5E-09 58.6 6.7 104 46-172 19-143 (235)
89 cd07410 MPP_CpdB_N Escherichia 97.2 0.0007 1.5E-08 58.8 5.7 66 48-118 2-95 (277)
90 PLN02533 probable purple acid 97.2 0.0006 1.3E-08 63.0 5.4 71 46-119 139-212 (427)
91 cd08164 MPP_Ted1 Saccharomyces 97.1 0.0016 3.5E-08 53.5 6.5 67 53-119 23-112 (193)
92 PF08321 PPP5: PPP5 TPR repeat 97.1 0.0012 2.6E-08 48.0 5.1 44 2-45 52-95 (95)
93 COG1768 Predicted phosphohydro 97.0 0.0016 3.5E-08 52.5 5.2 69 47-120 1-88 (230)
94 cd07408 MPP_SA0022_N Staphyloc 96.8 0.0031 6.8E-08 54.2 5.9 66 48-118 2-82 (257)
95 cd07378 MPP_ACP5 Homo sapiens 96.7 0.0043 9.2E-08 53.6 6.4 69 48-118 2-83 (277)
96 KOG2863 RNA lariat debranching 96.4 0.0064 1.4E-07 54.0 5.5 74 47-120 1-90 (456)
97 cd07412 MPP_YhcR_N Bacillus su 96.4 0.0076 1.7E-07 52.7 5.9 66 48-118 2-88 (288)
98 cd07411 MPP_SoxB_N Thermus the 96.2 0.0092 2E-07 51.4 5.3 65 48-118 2-95 (264)
99 KOG1432 Predicted DNA repair e 96.1 0.018 3.9E-07 50.9 6.5 71 48-119 55-148 (379)
100 cd07409 MPP_CD73_N CD73 ecto-5 96.0 0.02 4.4E-07 49.9 6.6 66 48-118 2-94 (281)
101 cd00842 MPP_ASMase acid sphing 96.0 0.016 3.5E-07 50.6 5.9 71 49-120 40-124 (296)
102 cd07406 MPP_CG11883_N Drosophi 95.7 0.023 5.1E-07 48.8 5.8 65 48-117 2-82 (257)
103 KOG3662 Cell division control 95.7 0.019 4E-07 52.3 5.2 73 47-119 49-145 (410)
104 KOG3325 Membrane coat complex 95.6 0.14 3E-06 40.1 8.9 62 48-118 2-66 (183)
105 KOG0376 Serine-threonine phosp 95.3 0.0088 1.9E-07 55.0 1.9 109 19-128 14-126 (476)
106 PRK09419 bifunctional 2',3'-cy 95.2 0.029 6.3E-07 58.2 5.4 67 47-118 661-736 (1163)
107 TIGR00282 metallophosphoestera 95.1 0.074 1.6E-06 46.0 6.7 67 47-118 1-71 (266)
108 cd07405 MPP_UshA_N Escherichia 94.5 0.062 1.4E-06 46.9 4.9 66 48-118 2-87 (285)
109 PF04042 DNA_pol_E_B: DNA poly 94.1 0.089 1.9E-06 43.5 4.8 72 49-120 1-93 (209)
110 cd07382 MPP_DR1281 Deinococcus 93.8 0.19 4.2E-06 43.2 6.5 66 48-118 1-70 (255)
111 cd08162 MPP_PhoA_N Synechococc 93.1 0.18 3.8E-06 44.8 5.3 66 48-118 2-91 (313)
112 COG0737 UshA 5'-nucleotidase/2 92.4 0.2 4.4E-06 47.5 4.9 69 46-119 26-116 (517)
113 KOG1378 Purple acid phosphatas 92.2 0.22 4.8E-06 45.9 4.7 74 45-121 146-224 (452)
114 PRK09420 cpdB bifunctional 2', 92.1 0.26 5.7E-06 48.0 5.5 69 45-118 24-122 (649)
115 KOG2476 Uncharacterized conser 92.0 0.5 1.1E-05 43.5 6.6 69 46-115 5-75 (528)
116 TIGR01390 CycNucDiestase 2',3' 92.0 0.27 5.8E-06 47.8 5.2 67 47-118 3-99 (626)
117 PRK09419 bifunctional 2',3'-cy 91.9 0.24 5.1E-06 51.6 5.1 67 47-118 42-139 (1163)
118 COG1311 HYS2 Archaeal DNA poly 91.8 0.67 1.5E-05 43.0 7.3 77 48-124 227-327 (481)
119 cd07407 MPP_YHR202W_N Saccharo 91.7 0.28 6.1E-06 42.8 4.6 67 47-118 6-97 (282)
120 KOG2310 DNA repair exonuclease 91.0 0.77 1.7E-05 43.2 6.9 56 45-100 12-79 (646)
121 COG3855 Fbp Uncharacterized pr 90.4 0.22 4.7E-06 45.9 2.8 41 73-118 190-230 (648)
122 KOG2679 Purple (tartrate-resis 90.4 0.37 7.9E-06 41.6 3.9 72 46-118 43-126 (336)
123 cd07387 MPP_PolD2_C PolD2 (DNA 90.3 1.3 2.9E-05 38.1 7.4 75 49-123 2-112 (257)
124 PTZ00422 glideosome-associated 90.1 0.58 1.3E-05 42.7 5.2 75 44-118 24-109 (394)
125 PRK11907 bifunctional 2',3'-cy 89.6 0.61 1.3E-05 46.6 5.3 68 46-118 115-213 (814)
126 TIGR01530 nadN NAD pyrophospha 88.2 1.1 2.3E-05 43.0 5.8 66 48-118 2-94 (550)
127 PTZ00235 DNA polymerase epsilo 88.0 2.3 5E-05 37.2 7.2 73 47-119 28-123 (291)
128 PRK09558 ushA bifunctional UDP 86.4 0.96 2.1E-05 43.3 4.4 68 46-118 34-121 (551)
129 PRK09418 bifunctional 2',3'-cy 85.8 1.4 2.9E-05 44.0 5.2 67 46-117 39-141 (780)
130 KOG3947 Phosphoesterases [Gene 84.2 2.5 5.5E-05 36.6 5.4 66 47-120 62-128 (305)
131 KOG3339 Predicted glycosyltran 83.0 21 0.00046 29.2 9.9 85 75-165 40-140 (211)
132 COG3855 Fbp Uncharacterized pr 77.9 11 0.00023 35.3 7.4 27 218-244 514-544 (648)
133 PF02875 Mur_ligase_C: Mur lig 68.2 11 0.00023 26.5 4.3 69 46-114 11-81 (91)
134 KOG3770 Acid sphingomyelinase 65.9 16 0.00034 35.1 5.9 60 62-121 197-266 (577)
135 PF12641 Flavodoxin_3: Flavodo 61.1 53 0.0012 26.0 7.4 53 49-101 1-66 (160)
136 PF06874 FBPase_2: Firmicute f 60.0 9.5 0.00021 36.8 3.4 26 217-242 506-535 (640)
137 COG4320 Uncharacterized protei 58.1 26 0.00056 31.3 5.4 60 36-102 46-108 (410)
138 PRK05434 phosphoglyceromutase; 53.7 1.1E+02 0.0024 29.1 9.4 105 6-117 79-189 (507)
139 KOG3425 Uncharacterized conser 53.4 56 0.0012 24.8 5.8 60 59-118 12-79 (128)
140 PRK10773 murF UDP-N-acetylmura 51.2 76 0.0016 29.5 7.9 67 47-113 325-392 (453)
141 COG1692 Calcineurin-like phosp 49.7 67 0.0015 27.6 6.4 66 47-117 1-70 (266)
142 TIGR01307 pgm_bpd_ind 2,3-bisp 49.3 1.1E+02 0.0024 29.1 8.5 102 6-114 75-182 (501)
143 PF09892 DUF2119: Uncharacteri 48.5 87 0.0019 25.7 6.7 52 49-101 9-76 (193)
144 KOG3818 DNA polymerase epsilon 48.0 81 0.0017 29.5 7.1 76 46-121 282-372 (525)
145 PF13258 DUF4049: Domain of un 46.3 32 0.00069 29.3 4.0 86 75-168 86-185 (318)
146 cd07382 MPP_DR1281 Deinococcus 44.1 31 0.00067 29.6 3.8 39 76-117 1-39 (255)
147 COG1692 Calcineurin-like phosp 43.1 42 0.00092 28.8 4.3 39 76-115 2-40 (266)
148 TIGR00282 metallophosphoestera 41.6 34 0.00074 29.6 3.7 40 76-118 2-41 (266)
149 COG0634 Hpt Hypoxanthine-guani 40.1 2E+02 0.0044 23.3 9.6 77 18-98 10-117 (178)
150 PF12085 DUF3562: Protein of u 38.2 70 0.0015 21.5 3.9 42 2-43 1-42 (66)
151 TIGR03729 acc_ester putative p 37.7 37 0.0008 28.4 3.3 29 216-244 195-223 (239)
152 PRK06843 inosine 5-monophospha 37.1 3.3E+02 0.0071 25.2 9.4 69 44-118 137-205 (404)
153 PLN02965 Probable pheophorbida 36.2 1.8E+02 0.0038 24.1 7.3 21 220-240 59-81 (255)
154 KOG3040 Predicted sugar phosph 36.0 2.7E+02 0.0058 23.6 8.1 80 2-81 48-146 (262)
155 PF09949 DUF2183: Uncharacteri 35.3 1.5E+02 0.0032 21.6 5.6 36 69-110 59-94 (100)
156 TIGR01143 murF UDP-N-acetylmur 35.1 2E+02 0.0044 26.2 8.0 69 47-115 296-365 (417)
157 TIGR00550 nadA quinolinate syn 34.7 54 0.0012 29.1 3.9 36 46-84 28-63 (310)
158 TIGR01143 murF UDP-N-acetylmur 33.9 2E+02 0.0044 26.2 7.7 7 49-55 327-333 (417)
159 PRK11475 DNA-binding transcrip 31.2 88 0.0019 25.8 4.4 52 58-117 25-80 (207)
160 PRK14093 UDP-N-acetylmuramoyla 30.2 2.4E+02 0.0053 26.4 7.7 66 47-113 337-408 (479)
161 TIGR00024 SbcD_rel_arch putati 30.1 1.9E+02 0.0041 24.2 6.4 60 16-83 34-99 (225)
162 COG0770 MurF UDP-N-acetylmuram 30.0 2.9E+02 0.0063 25.9 8.1 69 46-114 325-395 (451)
163 PF06490 FleQ: Flagellar regul 29.8 1.3E+02 0.0029 21.9 4.8 64 48-118 1-81 (109)
164 PRK05564 DNA polymerase III su 28.1 2.2E+02 0.0047 24.9 6.7 58 17-80 70-128 (313)
165 PF04263 TPK_catalytic: Thiami 28.1 70 0.0015 24.1 3.1 54 48-101 37-112 (123)
166 smart00411 BHL bacterial (prok 27.6 1.3E+02 0.0029 20.7 4.3 32 7-38 3-34 (90)
167 KOG0176 20S proteasome, regula 27.5 7.3 0.00016 32.0 -2.5 34 214-249 120-155 (241)
168 PRK11929 putative bifunctional 27.2 3.2E+02 0.007 28.1 8.5 74 46-119 833-908 (958)
169 PLN02538 2,3-bisphosphoglycera 26.7 1.7E+02 0.0037 28.2 5.9 78 6-90 98-177 (558)
170 PRK04531 acetylglutamate kinas 25.1 88 0.0019 28.8 3.7 22 90-111 20-41 (398)
171 TIGR01769 GGGP geranylgeranylg 24.9 2.4E+02 0.0051 23.4 5.9 57 60-119 11-67 (205)
172 PF02885 Glycos_trans_3N: Glyc 22.3 1.4E+02 0.003 19.6 3.4 26 7-32 2-27 (66)
173 COG3207 DIT1 Pyoverdine/dityro 22.3 1.5E+02 0.0032 25.9 4.2 42 42-83 101-156 (330)
174 PTZ00235 DNA polymerase epsilo 22.2 1.4E+02 0.003 26.3 4.1 90 73-169 26-121 (291)
175 COG1015 DeoB Phosphopentomutas 21.8 2.1E+02 0.0046 26.1 5.3 35 5-39 157-191 (397)
176 PRK10997 yieM hypothetical pro 21.7 3.8E+02 0.0083 25.4 7.2 44 74-118 417-461 (487)
177 COG3560 FMR2 Predicted oxidore 21.6 2.7E+02 0.0059 22.7 5.3 58 1-61 1-65 (200)
178 PRK15366 type III secretion sy 21.5 1.3E+02 0.0027 21.0 2.9 33 1-37 1-33 (80)
179 PF14165 YtzH: YtzH-like prote 21.1 1.6E+02 0.0035 20.9 3.5 35 4-39 28-62 (87)
180 PF00216 Bac_DNA_binding: Bact 21.0 1.1E+02 0.0023 21.2 2.7 32 7-38 3-34 (90)
181 PF13277 YmdB: YmdB-like prote 21.0 2.9E+02 0.0063 23.8 5.7 62 50-117 1-67 (253)
182 TIGR00055 uppS undecaprenyl di 20.1 1.5E+02 0.0033 25.0 3.9 48 21-68 60-108 (226)
183 PRK13226 phosphoglycolate phos 20.1 3E+02 0.0064 22.6 5.7 66 47-115 112-177 (229)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-63 Score=408.46 Aligned_cols=244 Identities=70% Similarity=1.277 Sum_probs=240.0
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccC
Q 025598 6 DLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVD 85 (250)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vd 85 (250)
++++++|++.+.+.+++.++..||.++.++|.+|+++..++.|+.|+|||||++.+|..+++..+..+...++|||||||
T Consensus 2 dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 2 DLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEec
Q 025598 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHG 165 (250)
Q Consensus 86 rG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHa 165 (250)
||.+|+|++.+|+.||.+||+++.+||||||.+.+...|||++||.++||+..+|+.+.+.|..||++++++++++||||
T Consensus 82 RG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHG 161 (303)
T KOG0372|consen 82 RGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHG 161 (303)
T ss_pred cccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhccccccCCCCCccccccccCCCCCCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCccCc
Q 025598 166 GLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGY 245 (250)
Q Consensus 166 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G~ 245 (250)
|++|+..++++++.+.|..++|.++.++|++||||.+..+|..+|||.|+.||.+++..|++.||+.+|+|+||-+.+||
T Consensus 162 GlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGy 241 (303)
T KOG0372|consen 162 GLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEGY 241 (303)
T ss_pred CCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccC
Q 025598 246 NWCQ 249 (250)
Q Consensus 246 ~~~~ 249 (250)
++.+
T Consensus 242 k~~F 245 (303)
T KOG0372|consen 242 KWHF 245 (303)
T ss_pred HHhc
Confidence 9754
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-59 Score=377.55 Aligned_cols=245 Identities=64% Similarity=1.171 Sum_probs=240.4
Q ss_pred hHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEecccc
Q 025598 5 ADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYV 84 (250)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~v 84 (250)
-+++.+++.+++++.|++.++..||+-++++|..|.++.|++.|+.|+|||||++.+|.++++..|..+...+||+||+|
T Consensus 4 ~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfV 83 (306)
T KOG0373|consen 4 MDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFV 83 (306)
T ss_pred CCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEecccc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEe
Q 025598 85 DRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLH 164 (250)
Q Consensus 85 drG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vH 164 (250)
|||..|+|++.+|+.||.+||.++.+||||||.+-+...|||++||..+||+...|+..-+.|..|+++++++++++|||
T Consensus 84 DRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVH 163 (306)
T KOG0373|consen 84 DRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVH 163 (306)
T ss_pred ccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHhccccccCCCCCccccccccCCCCCCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCccC
Q 025598 165 GGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDG 244 (250)
Q Consensus 165 aGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G 244 (250)
||++|+...+++++.+.|.+++|.++.++|++||||++.+.|..++||.|++||++.+++|...|++++|.|+|+.+.+|
T Consensus 164 GGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG 243 (306)
T KOG0373|consen 164 GGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEG 243 (306)
T ss_pred CCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccC
Q 025598 245 YNWCQ 249 (250)
Q Consensus 245 ~~~~~ 249 (250)
|++.+
T Consensus 244 ~KymF 248 (306)
T KOG0373|consen 244 FKYMF 248 (306)
T ss_pred HHhcc
Confidence 99765
No 3
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=8.7e-58 Score=395.87 Aligned_cols=243 Identities=78% Similarity=1.359 Sum_probs=234.3
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCC
Q 025598 7 LDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDR 86 (250)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdr 86 (250)
++.+++++.+.+.++.+++.+||++|+++++++|++++++.+++|+||||||+.+|.++|+..+.++.+++|||||||||
T Consensus 2 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDR 81 (285)
T cd07415 2 LDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDR 81 (285)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCC
Confidence 68899999999999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred CCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEecC
Q 025598 87 GYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGG 166 (250)
Q Consensus 87 G~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHaG 166 (250)
|+++.|++.+++.++..+|.+++++|||||...++..++|..++..+|+...+|..+.++|+.||++++++++++|||||
T Consensus 82 G~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgG 161 (285)
T cd07415 82 GYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGG 161 (285)
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCC
Confidence 99999999999999999999999999999999999999999999999987789999999999999999999999999999
Q ss_pred CCCCCCCHHHHHhccccccCCCCCccccccccCCCCCCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCccCcc
Q 025598 167 LSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYN 246 (250)
Q Consensus 167 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G~~ 246 (250)
++|...++++++.++|+.+.+.++...+++||||....+|.+++||.++.||.+++++||+++|+++||||||++++||+
T Consensus 162 i~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~ 241 (285)
T cd07415 162 LSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQ 241 (285)
T ss_pred CCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceEE
Confidence 99999999999999999988888899999999999888999999999999999999999999999999999999999999
Q ss_pred ccC
Q 025598 247 WCQ 249 (250)
Q Consensus 247 ~~~ 249 (250)
+.|
T Consensus 242 ~~~ 244 (285)
T cd07415 242 WMF 244 (285)
T ss_pred Eec
Confidence 865
No 4
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=2.3e-57 Score=397.17 Aligned_cols=246 Identities=33% Similarity=0.646 Sum_probs=222.7
Q ss_pred ChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCC----CEEEEeCCCCCHHHHHHHHHhcCCCC-CCeE
Q 025598 3 SQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKC----PVTVCGDIHGQFHDLVELFRIGGNAP-DTNY 77 (250)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~----~i~vigDIHG~~~~l~~ll~~~~~~~-~~~~ 77 (250)
|.++++++++.+.+.+.|+++++..||++|++++.++|+++.++. |++|||||||++.+|.++++..+.++ .+++
T Consensus 3 ~~~~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~ 82 (321)
T cd07420 3 TKDHIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPY 82 (321)
T ss_pred CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceE
Confidence 678899999999999999999999999999999999999998875 89999999999999999999888764 4789
Q ss_pred EEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCC--hhHHHHHHHHhhccCcEEE
Q 025598 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKHFTDLFDYLPLTAL 155 (250)
Q Consensus 78 vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~lp~~~~ 155 (250)
||||||||||++|+||+.+|+++|..+|+++++||||||.+.++..+||..++..+|+. ..+|..+.++|+.||++++
T Consensus 83 lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaai 162 (321)
T cd07420 83 VFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATI 162 (321)
T ss_pred EEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999974 6799999999999999999
Q ss_pred EcCcEEEEecCCCCCCCCHHHHHhcccccc-----CCCC----------------------CccccccccCCCCCCC-CC
Q 025598 156 IESQVFCLHGGLSPSLDTLDNIRALDRIQE-----VPHE----------------------GPMCDLLWSDPDDRCG-WG 207 (250)
Q Consensus 156 ~~~~~l~vHaGi~~~~~~~~~~~~~~~~~~-----~~~~----------------------~~~~~~lW~~p~~~~~-~~ 207 (250)
++++++|||||+++ ..++++++.++|... .|.. +...+++||||....+ |.
T Consensus 163 i~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~ 241 (321)
T cd07420 163 IDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKP 241 (321)
T ss_pred EcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCc
Confidence 99999999999986 467888888877421 1110 2457899999987444 67
Q ss_pred CCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCccCccccC
Q 025598 208 ISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQ 249 (250)
Q Consensus 208 ~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G~~~~~ 249 (250)
+++||.++.||.+++++||+++|+++||||||++++||++.|
T Consensus 242 ~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~ 283 (321)
T cd07420 242 NTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCH 283 (321)
T ss_pred cCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEec
Confidence 778999999999999999999999999999999999999865
No 5
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=1.5e-57 Score=396.54 Aligned_cols=244 Identities=59% Similarity=1.118 Sum_probs=234.4
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccC
Q 025598 6 DLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVD 85 (250)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vd 85 (250)
+++.+++.+.+.+.++++++.+||++|++++.+||++++++.+++|+||||||+.+|.++++..+..+.++++|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 81 (303)
T PTZ00239 2 DIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVD 81 (303)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcC
Confidence 37899999999999999999999999999999999999999999999999999999999999988888899999999999
Q ss_pred CCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEec
Q 025598 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHG 165 (250)
Q Consensus 86 rG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHa 165 (250)
||+++.|++.+++.++..+|.+++++|||||.+.++..+||..++..+|+...+|..+.++|+.||++++++++++||||
T Consensus 82 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHg 161 (303)
T PTZ00239 82 RGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHG 161 (303)
T ss_pred CCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778899999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhccccccCCCCCccccccccCCCCCCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCccCc
Q 025598 166 GLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGY 245 (250)
Q Consensus 166 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G~ 245 (250)
|++|...++++++.+.|+.+.|.++...|++||||....+|.+++||.++.||.+++++||+++|+++||||||++++||
T Consensus 162 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~ 241 (303)
T PTZ00239 162 GLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGY 241 (303)
T ss_pred ccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccce
Confidence 99999999999999999998888999999999999988899999999999999999999999999999999999999999
Q ss_pred cccC
Q 025598 246 NWCQ 249 (250)
Q Consensus 246 ~~~~ 249 (250)
++.+
T Consensus 242 ~~~~ 245 (303)
T PTZ00239 242 KYWF 245 (303)
T ss_pred EEEe
Confidence 9753
No 6
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=4.1e-56 Score=388.75 Aligned_cols=243 Identities=49% Similarity=0.965 Sum_probs=231.1
Q ss_pred HHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeE
Q 025598 6 DLDRQIEHLMQCK--------PLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNY 77 (250)
Q Consensus 6 ~~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~ 77 (250)
+++++++.+.+.. .++++++.+||++|.+++++||++++++.+++|+||||||+.+|.++++..+.++.+.+
T Consensus 10 ~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~y 89 (320)
T PTZ00480 10 DVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNY 89 (320)
T ss_pred CHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcceE
Confidence 4788888888654 69999999999999999999999999999999999999999999999999998889999
Q ss_pred EEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEc
Q 025598 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIE 157 (250)
Q Consensus 78 vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~ 157 (250)
||||||||||+++.|++.+++.++..+|.++++||||||...++..+||..++..+|+ ..+|..+.+.|..||++++++
T Consensus 90 lfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~-~~l~~~~~~~F~~LPlaAiI~ 168 (320)
T PTZ00480 90 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT-IKLWKTFTDCFNCLPVAALID 168 (320)
T ss_pred EEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC-HHHHHHHHHHHHhccHhheec
Confidence 9999999999999999999999999999999999999999999999999999999995 679999999999999999999
Q ss_pred CcEEEEecCCCCCCCCHHHHHhccccccCCCCCccccccccCCCC-CCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEE
Q 025598 158 SQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLTLISR 236 (250)
Q Consensus 158 ~~~l~vHaGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~-~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivr 236 (250)
++++|||||++|....+++++.+.|+.+.+.++.+.+++||||.. ..+|.+++||.+++||.+++++||+++|+++|||
T Consensus 169 ~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR 248 (320)
T PTZ00480 169 EKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICR 248 (320)
T ss_pred CcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEE
Confidence 999999999999999999999999999988889999999999986 6789999999999999999999999999999999
Q ss_pred cccCCccCccccC
Q 025598 237 AHQLVMDGYNWCQ 249 (250)
Q Consensus 237 gH~~~~~G~~~~~ 249 (250)
|||++++||++.|
T Consensus 249 ~Hq~v~~G~~~~~ 261 (320)
T PTZ00480 249 AHQVVEDGYEFFS 261 (320)
T ss_pred cCccccCceEEeC
Confidence 9999999999865
No 7
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=9e-56 Score=386.93 Aligned_cols=243 Identities=45% Similarity=0.809 Sum_probs=228.0
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccC
Q 025598 6 DLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVD 85 (250)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vd 85 (250)
.++.++|++++++.++++++.+||++|+++++++|++++++.+++||||||||+.+|.++|+..+.++.+++||||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 2 RIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 36789999999999999999999999999999999999999999999999999999999999998888999999999999
Q ss_pred CCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEec
Q 025598 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHG 165 (250)
Q Consensus 86 rG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHa 165 (250)
||+++.|++.+++.++..+|.++++||||||.+.++..++|..++..+|+ ..++..+.++|++||++++++++++||||
T Consensus 82 RG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~-~~l~~~~~~~f~~LPlaaii~~~i~~vHG 160 (305)
T cd07416 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS-ERVYDACMEAFDCLPLAALMNQQFLCVHG 160 (305)
T ss_pred CCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhcc-HHHHHHHHHHHhhccceeEEcCCEEEEcC
Confidence 99999999999999999999999999999999999889999999988884 67889999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhccccccCCCCCccccccccCCCCCC-------CCCC-CCCCCccccCHHHHHHHHHHcCCcEEEEc
Q 025598 166 GLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC-------GWGI-SPRGAGYTFGQDIASQFNHTNGLTLISRA 237 (250)
Q Consensus 166 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~~~-------~~~~-~~~g~~~~~g~~~~~~~l~~~~~~~ivrg 237 (250)
|++|...++++++.++|+.+.+..+.+.+++||||.... +|.. ++||.++.||.+++++||+++|+++||||
T Consensus 161 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~ 240 (305)
T cd07416 161 GLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRA 240 (305)
T ss_pred CCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEe
Confidence 999999999999999999888888889999999997522 3654 48999999999999999999999999999
Q ss_pred ccCCccCccccC
Q 025598 238 HQLVMDGYNWCQ 249 (250)
Q Consensus 238 H~~~~~G~~~~~ 249 (250)
||++++||++.|
T Consensus 241 He~~~~G~~~~~ 252 (305)
T cd07416 241 HEAQDAGYRMYR 252 (305)
T ss_pred ccccccceEEec
Confidence 999999999764
No 8
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=1.7e-55 Score=382.99 Aligned_cols=242 Identities=48% Similarity=0.993 Sum_probs=228.5
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEE
Q 025598 7 LDRQIEHLMQCK--------PLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYL 78 (250)
Q Consensus 7 ~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~v 78 (250)
++++++.+.+.. .++++++.+||++|++++.+||++++++.+++||||||||+.+|.++++..+.++.+++|
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 567777777655 699999999999999999999999999999999999999999999999999988899999
Q ss_pred EeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEcC
Q 025598 79 FMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIES 158 (250)
Q Consensus 79 flGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~ 158 (250)
|||||||||+++.|++.+++.++..+|.+++++|||||.+.++..++|..++..+|+ ..+|..+.++|+.||+++++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa~i~~ 160 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAAIIDE 160 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999985 6789999999999999999999
Q ss_pred cEEEEecCCCCCCCCHHHHHhccccccCCCCCccccccccCCCC-CCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEEc
Q 025598 159 QVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRA 237 (250)
Q Consensus 159 ~~l~vHaGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~-~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrg 237 (250)
+++|||||++|...++++++.+.|+.+.+.++.+.+++||||.. ..+|.+++||.++.||.+++++||+++|+++||||
T Consensus 161 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 240 (293)
T cd07414 161 KIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRA 240 (293)
T ss_pred cEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEEC
Confidence 99999999999999999999999998888888899999999986 67899999999999999999999999999999999
Q ss_pred ccCCccCccccC
Q 025598 238 HQLVMDGYNWCQ 249 (250)
Q Consensus 238 H~~~~~G~~~~~ 249 (250)
||++++||++.+
T Consensus 241 He~~~~G~~~~~ 252 (293)
T cd07414 241 HQVVEDGYEFFA 252 (293)
T ss_pred CccccCeEEEeC
Confidence 999999999754
No 9
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=3.2e-55 Score=380.76 Aligned_cols=242 Identities=40% Similarity=0.816 Sum_probs=226.4
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEE
Q 025598 7 LDRQIEHLMQCK--------PLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYL 78 (250)
Q Consensus 7 ~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~v 78 (250)
++++++++.+.. .++.+++.+||++|++++.+||++++++.+++|+||||||+.+|.++++..+.++.++++
T Consensus 4 ~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~l 83 (294)
T PTZ00244 4 VQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYL 83 (294)
T ss_pred HHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEE
Confidence 455666665533 688999999999999999999999999999999999999999999999999888888999
Q ss_pred EeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEcC
Q 025598 79 FMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIES 158 (250)
Q Consensus 79 flGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~ 158 (250)
|||||||||+++.|++.+++.+|..+|.+++++|||||...++..+||..++..+|+ ..+|..+.++|+.||+++++++
T Consensus 84 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaaii~~ 162 (294)
T PTZ00244 84 FLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCVISE 162 (294)
T ss_pred EeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheEecC
Confidence 999999999999999999999999999999999999999999999999999999995 6789999999999999999999
Q ss_pred cEEEEecCCCCCCCCHHHHHhccccccCCCCCccccccccCCCC-CCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEEc
Q 025598 159 QVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRA 237 (250)
Q Consensus 159 ~~l~vHaGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~-~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrg 237 (250)
+++|||||++|.+.++++++.++|+.+.+.++...+++||||.. ..+|.+++||.++.||.+++++||+++|+++||||
T Consensus 163 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 242 (294)
T PTZ00244 163 KIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRA 242 (294)
T ss_pred eeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEc
Confidence 99999999999999999999999998888888899999999986 67899999999999999999999999999999999
Q ss_pred ccCCccCccccC
Q 025598 238 HQLVMDGYNWCQ 249 (250)
Q Consensus 238 H~~~~~G~~~~~ 249 (250)
||++++||++.|
T Consensus 243 Hq~~~~G~~~~~ 254 (294)
T PTZ00244 243 HQVMERGYGFFA 254 (294)
T ss_pred CccccCceEEcC
Confidence 999999999864
No 10
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=7e-55 Score=382.15 Aligned_cols=246 Identities=37% Similarity=0.690 Sum_probs=228.9
Q ss_pred ChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCC----CEEEEeCCCCCHHHHHHHHHhcCCCC-CCeE
Q 025598 3 SQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKC----PVTVCGDIHGQFHDLVELFRIGGNAP-DTNY 77 (250)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~----~i~vigDIHG~~~~l~~ll~~~~~~~-~~~~ 77 (250)
|-+.++.+++.+++++.|+.+++.++|++|.++++++|++++++. +++||||||||+.+|.++|+..+.++ .+++
T Consensus 12 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~y 91 (316)
T cd07417 12 TLEFVKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNPY 91 (316)
T ss_pred CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCeE
Confidence 456799999999999999999999999999999999999988864 49999999999999999999888654 4689
Q ss_pred EEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEc
Q 025598 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIE 157 (250)
Q Consensus 78 vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~ 157 (250)
||||||||||++|.||+.+++.+|..+|.++++||||||.+.++..++|..++..+|+ ..++..+.++|+.||++++++
T Consensus 92 lFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~-~~l~~~~~~~f~~LPlaaii~ 170 (316)
T cd07417 92 LFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN-EQMFDLFSEVFNWLPLAHLIN 170 (316)
T ss_pred EEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc-HHHHHHHHHHHHhchHhheeC
Confidence 9999999999999999999999999999999999999999999999999999998885 678899999999999999998
Q ss_pred CcEEEEecCC-CCCCCCHHHHHhccccccCCCCCccccccccCCCCCCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEE
Q 025598 158 SQVFCLHGGL-SPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISR 236 (250)
Q Consensus 158 ~~~l~vHaGi-~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivr 236 (250)
++++|||||+ ++...++++++.++|+.+.+.++.+.+++||||....+|.+++||.++.||.+++++||+++|+++|||
T Consensus 171 ~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 250 (316)
T cd07417 171 GKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIR 250 (316)
T ss_pred CeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEE
Confidence 9999999999 556788999999999988888888999999999988889999999999999999999999999999999
Q ss_pred cccCCccCccccC
Q 025598 237 AHQLVMDGYNWCQ 249 (250)
Q Consensus 237 gH~~~~~G~~~~~ 249 (250)
|||++++||++.|
T Consensus 251 ~He~~~~G~~~~~ 263 (316)
T cd07417 251 SHEVKDEGYEVEH 263 (316)
T ss_pred CCcccceeEEEec
Confidence 9999999999865
No 11
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=3.6e-54 Score=371.79 Aligned_cols=229 Identities=54% Similarity=0.986 Sum_probs=218.1
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHH
Q 025598 20 LPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVA 99 (250)
Q Consensus 20 l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~ 99 (250)
++++++.+||++|+++++++|++++++++++||||||||+.+|.++|+..+..+.+++|||||+||||+++.|++.+++.
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred hhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEecCCCCCCCCHHHHHh
Q 025598 100 LKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRA 179 (250)
Q Consensus 100 l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHaGi~~~~~~~~~~~~ 179 (250)
++..+|.+++++|||||.+.++..++|..++..+|+ ..+|..+.++|+.||++++++++++|||||++|...++++++.
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~ 159 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRK 159 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhc
Confidence 999999999999999999999999999999999995 6899999999999999999988999999999999999999999
Q ss_pred ccccccCCCCCccccccccCCCC-CCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCccCccccC
Q 025598 180 LDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQ 249 (250)
Q Consensus 180 ~~~~~~~~~~~~~~~~lW~~p~~-~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G~~~~~ 249 (250)
+.|+...+.++...+++||||.. ..+|.+++||.++.||.+++++||+++|+++||||||++++||++.|
T Consensus 160 i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~ 230 (271)
T smart00156 160 LKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFH 230 (271)
T ss_pred ccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEec
Confidence 99998888888899999999964 78899999999999999999999999999999999999999999865
No 12
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=1.7e-52 Score=371.65 Aligned_cols=247 Identities=38% Similarity=0.613 Sum_probs=219.9
Q ss_pred ChhHHHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhhCCCccccC----CCEEEEeCCCCCHHHHHHHHHh
Q 025598 3 SQADLDRQIEHLMQC----------KPLPEQEVNILCEQARAILVEEWNVQPVK----CPVTVCGDIHGQFHDLVELFRI 68 (250)
Q Consensus 3 ~~~~~~~~~~~~~~~----------~~l~~~~~~~l~~~~~~~l~~~~~~~~~~----~~i~vigDIHG~~~~l~~ll~~ 68 (250)
|.+.++.+++.++.. ..++.+++..||++|+++|+++|+++.++ .+++|||||||++.+|.++|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 8 TNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred CHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 567788999999766 45899999999999999999999999987 7999999999999999999998
Q ss_pred cCCCCC-CeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCC--hhHHHHHHH
Q 025598 69 GGNAPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKHFTD 145 (250)
Q Consensus 69 ~~~~~~-~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 145 (250)
.+.++. +.+||||||||||+++.||+.+++.++..+|.++++||||||...++..+||..++..+|+. ..+++.+.+
T Consensus 88 ~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~ 167 (377)
T cd07418 88 AGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLG 167 (377)
T ss_pred hCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHH
Confidence 887654 56999999999999999999999999999999999999999999999999999999999975 478999999
Q ss_pred HhhccCcEEEEcCcEEEEecCCC---------------------------CCCCCHHHHHhcccc-ccCCCCCc---ccc
Q 025598 146 LFDYLPLTALIESQVFCLHGGLS---------------------------PSLDTLDNIRALDRI-QEVPHEGP---MCD 194 (250)
Q Consensus 146 ~l~~lp~~~~~~~~~l~vHaGi~---------------------------~~~~~~~~~~~~~~~-~~~~~~~~---~~~ 194 (250)
+|++||++++++++++|||||++ +...++++++.++|+ .+.+.++. ..|
T Consensus 168 ~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~d 247 (377)
T cd07418 168 CFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGD 247 (377)
T ss_pred HHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccccee
Confidence 99999999999889999999994 344678888888886 34444443 579
Q ss_pred ccccCCCCCCCCCCC-CCCCccccCHHHHHHHHHHcCCcEEEEcccC------------CccCccccC
Q 025598 195 LLWSDPDDRCGWGIS-PRGAGYTFGQDIASQFNHTNGLTLISRAHQL------------VMDGYNWCQ 249 (250)
Q Consensus 195 ~lW~~p~~~~~~~~~-~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~------------~~~G~~~~~ 249 (250)
++||||....+|..+ .||.++.||.+++.+||+++|+++||||||+ +++||++.|
T Consensus 248 lLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~ 315 (377)
T cd07418 248 VLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDH 315 (377)
T ss_pred eEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEec
Confidence 999999987777665 7999999999999999999999999999996 679999865
No 13
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=2.1e-53 Score=372.94 Aligned_cols=231 Identities=50% Similarity=0.992 Sum_probs=224.0
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcC-CCCCCeEEEeccccCCCCChHHHHHHH
Q 025598 19 PLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGG-NAPDTNYLFMGDYVDRGYYSVETVTLL 97 (250)
Q Consensus 19 ~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~-~~~~~~~vflGD~vdrG~~~~evl~~l 97 (250)
.++.+++..++.++.+++.++|+++.++.||.|+|||||++.+|.+++...+ .++..+++|||||||||++++|++.+|
T Consensus 31 ~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL 110 (331)
T KOG0374|consen 31 PLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLL 110 (331)
T ss_pred eccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehh
Confidence 4899999999999999999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEecCCCCCCCCHHHH
Q 025598 98 VALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNI 177 (250)
Q Consensus 98 ~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHaGi~~~~~~~~~~ 177 (250)
+++|.+||++++++|||||.+.++..|||++||..+|+...+|..+.+.|..||++++++++++|+|||++|...+++++
T Consensus 111 ~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i 190 (331)
T KOG0374|consen 111 FALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQI 190 (331)
T ss_pred hhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHH
Confidence 99999999999999999999999999999999999997778899999999999999999999999999999999999999
Q ss_pred HhccccccCCCCCccccccccCCCC-CCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCccCccccC
Q 025598 178 RALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQ 249 (250)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~lW~~p~~-~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G~~~~~ 249 (250)
+.+.|+.+.+..+...|++|+||.. ..+|..+.||.++.||++++.+||+++++++|||||+++++||||+.
T Consensus 191 ~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa 263 (331)
T KOG0374|consen 191 RAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFA 263 (331)
T ss_pred hhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEec
Confidence 9999999999999999999999997 79999999999999999999999999999999999999999999863
No 14
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=2.6e-51 Score=360.16 Aligned_cols=233 Identities=42% Similarity=0.776 Sum_probs=210.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCCCC--------CeEEEeccccCCCC
Q 025598 17 CKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPD--------TNYLFMGDYVDRGY 88 (250)
Q Consensus 17 ~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~--------~~~vflGD~vdrG~ 88 (250)
...++.+++.+||++|++++++||++++++.+++||||||||+++|.++|+..+.++. .++|||||||||||
T Consensus 18 ~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp 97 (311)
T cd07419 18 RFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGS 97 (311)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCC
Confidence 4468899999999999999999999999999999999999999999999988876533 47999999999999
Q ss_pred ChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCC-----hhHHHHHHHHhhccCcEEEEcCcEEEE
Q 025598 89 YSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGN-----ANVWKHFTDLFDYLPLTALIESQVFCL 163 (250)
Q Consensus 89 ~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~lp~~~~~~~~~l~v 163 (250)
++.||+.+++.++..+|.++++||||||.+.++..++|..++..+|+. ...+..+.++|+.||++++++++++||
T Consensus 98 ~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~v 177 (311)
T cd07419 98 NSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCM 177 (311)
T ss_pred ChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEE
Confidence 999999999999999999999999999999999999999998888875 358889999999999999888899999
Q ss_pred ecCCCCCCCCHHHHHhccccc-cCCCCCccccccccCCCCC---CCCCCCC---CCCc--cccCHHHHHHHHHHcCCcEE
Q 025598 164 HGGLSPSLDTLDNIRALDRIQ-EVPHEGPMCDLLWSDPDDR---CGWGISP---RGAG--YTFGQDIASQFNHTNGLTLI 234 (250)
Q Consensus 164 HaGi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lW~~p~~~---~~~~~~~---~g~~--~~~g~~~~~~~l~~~~~~~i 234 (250)
|||++|...++++++.+.|+. ..+.++.+.+++||||... .+|.+++ ||.+ +.||.+++++||+++|+++|
T Consensus 178 HgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~i 257 (311)
T cd07419 178 HGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMI 257 (311)
T ss_pred ccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEE
Confidence 999999999999999999876 3445567899999999863 4566555 8888 69999999999999999999
Q ss_pred EEcccCCccCccccC
Q 025598 235 SRAHQLVMDGYNWCQ 249 (250)
Q Consensus 235 vrgH~~~~~G~~~~~ 249 (250)
|||||++++||++.+
T Consensus 258 iRgHe~~~~G~~~~~ 272 (311)
T cd07419 258 IRAHECVMDGFERFA 272 (311)
T ss_pred EEechhhhCCeEEeC
Confidence 999999999999764
No 15
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-52 Score=342.98 Aligned_cols=247 Identities=83% Similarity=1.420 Sum_probs=240.7
Q ss_pred hhHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccc
Q 025598 4 QADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDY 83 (250)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~ 83 (250)
+.+++.++|++.+++++++.++..+++.|+++|.++.++.+++.++.|+||+||++++|.++++..|..++..++|+|||
T Consensus 17 i~~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDy 96 (319)
T KOG0371|consen 17 ILDVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDY 96 (319)
T ss_pred ccccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceeeeeee
Confidence 45688999999999999999999999999999999999999999999999999999999999998888899999999999
Q ss_pred cCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEE
Q 025598 84 VDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCL 163 (250)
Q Consensus 84 vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~v 163 (250)
||||++|.+++.++..+|.+||+++.+||||||.+.+...++|++||.++||+..+|..+.+.+..+|+.+.++++++|.
T Consensus 97 vdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~ 176 (319)
T KOG0371|consen 97 VDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCL 176 (319)
T ss_pred cccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred ecCCCCCCCCHHHHHhccccccCCCCCccccccccCCCCCCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCcc
Q 025598 164 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMD 243 (250)
Q Consensus 164 HaGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~ 243 (250)
|||++|+...+++++.+.|..++|.++.++|++|++|..+.+|..++||.++.||.+....|-.++|+++|-|.|+-+.+
T Consensus 177 HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lslisRahqlvm~ 256 (319)
T KOG0371|consen 177 HGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVME 256 (319)
T ss_pred cCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCC
Q 025598 244 GYNWCQV 250 (250)
Q Consensus 244 G~~~~~~ 250 (250)
||+|.|.
T Consensus 257 g~nW~~~ 263 (319)
T KOG0371|consen 257 GYNWYHL 263 (319)
T ss_pred ccceeee
Confidence 9999873
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=5.2e-48 Score=331.22 Aligned_cols=239 Identities=45% Similarity=0.820 Sum_probs=224.7
Q ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCC
Q 025598 8 DRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRG 87 (250)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG 87 (250)
+-+-+++.+-..|+++..+.++.++..+|.+|++++++..||.|+|||||+|.+|.++++..|.+...+++|||||||||
T Consensus 49 ~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRG 128 (517)
T KOG0375|consen 49 DVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 128 (517)
T ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccc
Confidence 34556677777899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEecCC
Q 025598 88 YYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGL 167 (250)
Q Consensus 88 ~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHaGi 167 (250)
..|+||+.+|.+||..||..+++||||||.+-+...+.|..||..+| +.++|+...+.|..||++++.++.++|||||+
T Consensus 129 yFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQflCVHGGl 207 (517)
T KOG0375|consen 129 YFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFLCVHGGL 207 (517)
T ss_pred eeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceEEecCCC
Confidence 99999999999999999999999999999999999999999999999 58899999999999999999999999999999
Q ss_pred CCCCCCHHHHHhccccccCCCCCccccccccCCCC-------CCCC-CCCCCCCccccCHHHHHHHHHHcCCcEEEEccc
Q 025598 168 SPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-------RCGW-GISPRGAGYTFGQDIASQFNHTNGLTLISRAHQ 239 (250)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~-------~~~~-~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~ 239 (250)
+|...++++++.++|..+.|..+.++|++|+||.. .+.| .++.||+++.|...++++||+.+|+-.|||+|+
T Consensus 208 SPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHE 287 (517)
T KOG0375|consen 208 SPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHE 287 (517)
T ss_pred CcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhh
Confidence 99999999999999999999999999999999974 1223 356799999999999999999999999999999
Q ss_pred CCccCccc
Q 025598 240 LVMDGYNW 247 (250)
Q Consensus 240 ~~~~G~~~ 247 (250)
-++.||+-
T Consensus 288 AQDaGYRM 295 (517)
T KOG0375|consen 288 AQDAGYRM 295 (517)
T ss_pred hhhhhhhh
Confidence 99999974
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-44 Score=315.88 Aligned_cols=246 Identities=30% Similarity=0.625 Sum_probs=215.3
Q ss_pred ChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc----CCCEEEEeCCCCCHHHHHHHHHhcCCCCC-CeE
Q 025598 3 SQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPV----KCPVTVCGDIHGQFHDLVELFRIGGNAPD-TNY 77 (250)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~----~~~i~vigDIHG~~~~l~~ll~~~~~~~~-~~~ 77 (250)
++.+++.++|+|+.+++|+..++..++.+|+++|+..|++-++ +..+.|+||+||.+++|.-+|.+.|.+.. .-|
T Consensus 117 ~~~~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npY 196 (631)
T KOG0377|consen 117 RKNHIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPY 196 (631)
T ss_pred CchHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCe
Confidence 4678999999999999999999999999999999999999776 45799999999999999999988887765 469
Q ss_pred EEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhC--ChhHHHHHHHHhhccCcEEE
Q 025598 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYG--NANVWKHFTDLFDYLPLTAL 155 (250)
Q Consensus 78 vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~lp~~~~ 155 (250)
||.||+||||.+++|+|..|+.+...+|..+++-|||||..+++-.|||.+|...+|. ..++.+.+.++++.||++.+
T Consensus 197 vFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~ti 276 (631)
T KOG0377|consen 197 VFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTI 276 (631)
T ss_pred eecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhh
Confidence 9999999999999999999999999999999999999999999999999999999996 35777888999999999999
Q ss_pred EcCcEEEEecCCCCCCCCHHHHHhccccc--c---CCC----C-------------CccccccccCCCCCCCC-CCCCCC
Q 025598 156 IESQVFCLHGGLSPSLDTLDNIRALDRIQ--E---VPH----E-------------GPMCDLLWSDPDDRCGW-GISPRG 212 (250)
Q Consensus 156 ~~~~~l~vHaGi~~~~~~~~~~~~~~~~~--~---~~~----~-------------~~~~~~lW~~p~~~~~~-~~~~~g 212 (250)
++.++++||||++... .++.+..+.|-. . -|. + ....|++||||....++ .+.-||
T Consensus 277 id~~ilvvHGGiSd~T-dl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RG 355 (631)
T KOG0377|consen 277 IDSRILVVHGGISDST-DLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRG 355 (631)
T ss_pred cccceEEEecCcccch-hHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccC
Confidence 9999999999997653 444455444321 1 011 0 02468999999986665 455699
Q ss_pred CccccCHHHHHHHHHHcCCcEEEEcccCCccCccccC
Q 025598 213 AGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQ 249 (250)
Q Consensus 213 ~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G~~~~~ 249 (250)
.|.+||++.+..||++++++++||+|+|.++||||+|
T Consensus 356 gG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~H 392 (631)
T KOG0377|consen 356 GGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCH 392 (631)
T ss_pred CcceeCchHHHHHHHHhCceeeeeecccCCCcceeee
Confidence 9999999999999999999999999999999999998
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=8.8e-35 Score=259.63 Aligned_cols=246 Identities=38% Similarity=0.717 Sum_probs=225.6
Q ss_pred ChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccC----CCEEEEeCCCCCHHHHHHHHHhcCCCCC-CeE
Q 025598 3 SQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVK----CPVTVCGDIHGQFHDLVELFRIGGNAPD-TNY 77 (250)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~----~~i~vigDIHG~~~~l~~ll~~~~~~~~-~~~ 77 (250)
|.+.+..+++.+.....++...+-+++++++.++...++++.++ .++.++||.||++.++.+++...+.++. ..+
T Consensus 166 t~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~y 245 (476)
T KOG0376|consen 166 TLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPY 245 (476)
T ss_pred hHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccc
Confidence 56778889999999999999999999999999999999987664 4699999999999999999998877664 579
Q ss_pred EEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEc
Q 025598 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIE 157 (250)
Q Consensus 78 vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~ 157 (250)
+|.||++|||..+.++...+...+..+|++++++|||||...++..++|..++..+|.. ..+....+.|..||++..++
T Consensus 246 lfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte-~~~~~f~~~f~~LPl~~~i~ 324 (476)
T KOG0376|consen 246 LFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTE-EMFNLFSEVFIWLPLAHLIN 324 (476)
T ss_pred cccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHH-HHHHhhhhhhccccchhhhc
Confidence 99999999999999999999999999999999999999999999999999999999963 34444558899999999999
Q ss_pred CcEEEEecCC-CCCCCCHHHHHhccccccCCCCCccccccccCCCCCCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEE
Q 025598 158 SQVFCLHGGL-SPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISR 236 (250)
Q Consensus 158 ~~~l~vHaGi-~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivr 236 (250)
++++.+|||+ ++....+++++.|.|...-+.++.+++++|++|....+..++.||.+..||.+++.+||+.+|+++|||
T Consensus 325 ~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~r 404 (476)
T KOG0376|consen 325 NKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIR 404 (476)
T ss_pred CceEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHhh
Confidence 9999999998 455567999999999988888899999999999999999999999999999999999999999999999
Q ss_pred cccCCccCccccC
Q 025598 237 AHQLVMDGYNWCQ 249 (250)
Q Consensus 237 gH~~~~~G~~~~~ 249 (250)
||++.+.||++-|
T Consensus 405 she~~d~gy~~eh 417 (476)
T KOG0376|consen 405 SHEVKDEGYEVEH 417 (476)
T ss_pred ccccCCCceeeec
Confidence 9999999999876
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=1.1e-32 Score=232.03 Aligned_cols=186 Identities=49% Similarity=0.828 Sum_probs=150.1
Q ss_pred EEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHH
Q 025598 50 TVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDE 129 (250)
Q Consensus 50 ~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~ 129 (250)
+||||||||+++|.++++.++..+.+.+||+||++||||++.++++++++++.. |.++++|+||||.+.+....++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999998888999999999999999999999999998766 7789999999999988765543322
Q ss_pred H--------HHHhCChhHHHHHHHHhhccCcEEEEcC-cEEEEecCCCCCCCCHHHHHhccccccCCCCCccccccccCC
Q 025598 130 C--------LRKYGNANVWKHFTDLFDYLPLTALIES-QVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDP 200 (250)
Q Consensus 130 ~--------~~~~~~~~~~~~~~~~l~~lp~~~~~~~-~~l~vHaGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p 200 (250)
. ...+.....+....+|++++|++..++. +++|||||++|......+.. ..+.+....+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 1 2333445677888999999999988865 99999999999876554433 2333445689999988
Q ss_pred CCCCCC-CCCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCccCcc
Q 025598 201 DDRCGW-GISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYN 246 (250)
Q Consensus 201 ~~~~~~-~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G~~ 246 (250)
.....+ ..+.++. |++....++..++.+.||+||+|+..|+.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~ 196 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYE 196 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccE
Confidence 753332 2233332 89999999999999999999999999973
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.96 E-value=1.9e-28 Score=209.24 Aligned_cols=123 Identities=22% Similarity=0.408 Sum_probs=98.4
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCC---------CCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchh
Q 025598 47 CPVTVCGDIHGQFHDLVELFRIGGNA---------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 117 (250)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~~---------~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~ 117 (250)
++++||||||||++.|.++|+++++. +.+++||+||+|||||+|.+|+++++++.. +.++++|+||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~~--~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELVE--KKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHhh--CCCEEEEeCccHH
Confidence 57999999999999999999987763 468999999999999999999999998853 4589999999999
Q ss_pred hhhhhhhc-------ChHHHHHHhCC------hhHHHHHHHHhhccCcEEEE-cCcEEEEecCCCCCC
Q 025598 118 RQITQVYG-------FYDECLRKYGN------ANVWKHFTDLFDYLPLTALI-ESQVFCLHGGLSPSL 171 (250)
Q Consensus 118 ~~~~~~~~-------~~~~~~~~~~~------~~~~~~~~~~l~~lp~~~~~-~~~~l~vHaGi~~~~ 171 (250)
++++...+ ...++..+|.. ..+.+.+.+|++++|++..+ .++++|||||++|..
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 98765432 12234444431 23557788999999998765 367999999998763
No 21
>PHA02239 putative protein phosphatase
Probab=99.95 E-value=1.7e-27 Score=201.65 Aligned_cols=137 Identities=26% Similarity=0.437 Sum_probs=104.6
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCC--CCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhh
Q 025598 47 CPVTVCGDIHGQFHDLVELFRIGGNA--PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVY 124 (250)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~~--~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~ 124 (250)
|++++|||||||++.|.++++.+... +.+.+||+||||||||++.++++.++++.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 58999999999999999999887433 468999999999999999999999998753 345799999999999765421
Q ss_pred c--------------ChHHHHHHhCCh------------------------------hHHHHHHHHhhccCcEEEEcCcE
Q 025598 125 G--------------FYDECLRKYGNA------------------------------NVWKHFTDLFDYLPLTALIESQV 160 (250)
Q Consensus 125 ~--------------~~~~~~~~~~~~------------------------------~~~~~~~~~l~~lp~~~~~~~~~ 160 (250)
+ ...++..+|+.. ..+..+..|+++||++.. .+++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~-~~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYK-EDKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEE-ECCE
Confidence 1 113445566411 122455679999999977 4789
Q ss_pred EEEecCCCCCCCCHHHHHhccccccCCCCCccccccccC
Q 025598 161 FCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSD 199 (250)
Q Consensus 161 l~vHaGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~ 199 (250)
+|||||+.|..+..+|. ..+++|.+
T Consensus 159 ifVHAGi~p~~~~~~q~--------------~~~llWiR 183 (235)
T PHA02239 159 IFSHSGGVSWKPVEEQT--------------IDQLIWSR 183 (235)
T ss_pred EEEeCCCCCCCChhhCC--------------HhHeEEec
Confidence 99999999886533332 27899995
No 22
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.95 E-value=7.5e-28 Score=206.36 Aligned_cols=140 Identities=21% Similarity=0.307 Sum_probs=109.5
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCC-CCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhc
Q 025598 47 CPVTVCGDIHGQFHDLVELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (250)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~ 125 (250)
|+++||||||||+++|.++|+++++. +.|.+||+||+|||||+|.+|++++.++ +.++++|+||||.++++...+
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l----~~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSL----GDAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhc----CCCeEEEEChhHHHHHHHhcC
Confidence 57999999999999999999998754 5789999999999999999999999988 346889999999999887655
Q ss_pred Ch----HHHHHHhCChhHHHHHHHHhhccCcEEEEc-CcEEEEecCCCCCCCCHHHHHhccccccCCCCC
Q 025598 126 FY----DECLRKYGNANVWKHFTDLFDYLPLTALIE-SQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEG 190 (250)
Q Consensus 126 ~~----~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~-~~~l~vHaGi~~~~~~~~~~~~~~~~~~~~~~~ 190 (250)
+. ......+......++..+||+++|+..... .++++||||++|.++.........+++...+.+
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~l~~a~~~a~eve~~L~~~ 146 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSD 146 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 32 122223223445678899999999986543 469999999999997655555555554444333
No 23
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.95 E-value=3e-27 Score=198.99 Aligned_cols=116 Identities=26% Similarity=0.408 Sum_probs=92.5
Q ss_pred EEEeCCCCCHHHHHHHHHhcCCC--------CCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhh
Q 025598 50 TVCGDIHGQFHDLVELFRIGGNA--------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQIT 121 (250)
Q Consensus 50 ~vigDIHG~~~~l~~ll~~~~~~--------~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~ 121 (250)
+||||||||+++|.++|++++.. +.+++||+||||||||+|.+|+++++++.. +.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHH
Confidence 79999999999999999988654 468999999999999999999999999864 34799999999999875
Q ss_pred hhhc------Ch-----------HHHHHHhC-ChhHHHHHHHHhhccCcEEEEcCcEEEEecCCC
Q 025598 122 QVYG------FY-----------DECLRKYG-NANVWKHFTDLFDYLPLTALIESQVFCLHGGLS 168 (250)
Q Consensus 122 ~~~~------~~-----------~~~~~~~~-~~~~~~~~~~~l~~lp~~~~~~~~~l~vHaGi~ 168 (250)
...+ +. .+...++. .....+...+||++||+.... ++++|||||++
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 4321 00 12233332 234457789999999999764 78999999985
No 24
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.95 E-value=2.7e-27 Score=204.48 Aligned_cols=133 Identities=22% Similarity=0.334 Sum_probs=104.6
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCC-CCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhc
Q 025598 47 CPVTVCGDIHGQFHDLVELFRIGGN-APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (250)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~-~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~ 125 (250)
|+++||||||||+++|.++|+++++ ++.|.+||+||+|||||+|.+|+++++++ +.++++|+||||.+++...++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 5899999999999999999998875 46789999999999999999999999988 347999999999998776544
Q ss_pred Ch----HHHHHHhCChhHHHHHHHHhhccCcEEEE-cCcEEEEecCCCCCCCCHHHHHhcccc
Q 025598 126 FY----DECLRKYGNANVWKHFTDLFDYLPLTALI-ESQVFCLHGGLSPSLDTLDNIRALDRI 183 (250)
Q Consensus 126 ~~----~~~~~~~~~~~~~~~~~~~l~~lp~~~~~-~~~~l~vHaGi~~~~~~~~~~~~~~~~ 183 (250)
.. .....++......+...+|++++|+...+ .+++++||||++|.++..+.....++.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~ev 139 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREV 139 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHH
Confidence 32 12233332333456788999999998665 568999999999998655544433333
No 25
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.95 E-value=2.7e-27 Score=197.34 Aligned_cols=162 Identities=20% Similarity=0.345 Sum_probs=116.9
Q ss_pred EEEeCCCCCHHHHHHHHHhcCC--------CCCCeEEEeccccCCCCChHHHHHHHHHhhhh---cCCcEEEECCCchhh
Q 025598 50 TVCGDIHGQFHDLVELFRIGGN--------APDTNYLFMGDYVDRGYYSVETVTLLVALKVR---YRDRITILRGNHESR 118 (250)
Q Consensus 50 ~vigDIHG~~~~l~~ll~~~~~--------~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~---~p~~v~~l~GNHE~~ 118 (250)
+||||||||+++|.++|+.++. .+.+.+|++||+|||||++.+|+++++++... .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999998763 46789999999999999999999999999754 345799999999999
Q ss_pred hhhhhhcChH-HHHHHhC-----Chh---HHHHHHHHhhccCcEEEEcCcEEEEecCCCCCCCCHHHHHhccccccCCCC
Q 025598 119 QITQVYGFYD-ECLRKYG-----NAN---VWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHE 189 (250)
Q Consensus 119 ~~~~~~~~~~-~~~~~~~-----~~~---~~~~~~~~l~~lp~~~~~~~~~l~vHaGi~~~~~~~~~~~~~~~~~~~~~~ 189 (250)
.+...+.+.. ....... ... ....+.+|++++|+...+ ++++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~-~~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKV-NDTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEE-CCEEEEeCCcHH--------------------
Confidence 8864332211 1111110 011 123568999999999876 679999999833
Q ss_pred CccccccccCCCCCCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCccCc
Q 025598 190 GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGY 245 (250)
Q Consensus 190 ~~~~~~lW~~p~~~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G~ 245 (250)
+|++. .+..... ...+...+.++++.++.++||+|||+++.|.
T Consensus 140 ------~w~r~----y~~~~~~---~~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~ 182 (208)
T cd07425 140 ------LWYRG----YSKETSD---KECAAAHLDKVLERLGAKRMVVGHTPQEGGI 182 (208)
T ss_pred ------HHhhH----hhhhhhh---ccchHHHHHHHHHHcCCCeEEEcCeeeecCc
Confidence 33311 0000000 0112356778899999999999999999886
No 26
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.95 E-value=6.8e-27 Score=200.74 Aligned_cols=148 Identities=23% Similarity=0.319 Sum_probs=111.8
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCC------CCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCC-cEEEECCCchhhh
Q 025598 47 CPVTVCGDIHGQFHDLVELFRIGGN------APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRD-RITILRGNHESRQ 119 (250)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~------~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~-~v~~l~GNHE~~~ 119 (250)
.++++|||||||++.|.++++.+.. ...+.+|||||||||||+|.+|+++|++++..+|. ++++|+||||.++
T Consensus 2 ~~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 2 RVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred ceEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 3799999999999999999976532 13467999999999999999999999999887765 6899999999887
Q ss_pred hhhhhc-----------------------------------------C----------------------hHHHHHHhCC
Q 025598 120 ITQVYG-----------------------------------------F----------------------YDECLRKYGN 136 (250)
Q Consensus 120 ~~~~~~-----------------------------------------~----------------------~~~~~~~~~~ 136 (250)
+..... | ..++..+||-
T Consensus 82 l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv 161 (304)
T cd07421 82 AAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGV 161 (304)
T ss_pred HhHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCC
Confidence 643221 0 1245556652
Q ss_pred h--------hHHHHHHHHhhccCcEEEEcCcE-------------EEEecCCCCCCCCHHHHHhcc-ccccCCCCCcccc
Q 025598 137 A--------NVWKHFTDLFDYLPLTALIESQV-------------FCLHGGLSPSLDTLDNIRALD-RIQEVPHEGPMCD 194 (250)
Q Consensus 137 ~--------~~~~~~~~~l~~lp~~~~~~~~~-------------l~vHaGi~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 194 (250)
. .+.+...+||++||..... +++ +|||||+.|..+..+|.+.+. +-...| ..+
T Consensus 162 ~~~~~~l~~avP~~H~~fl~~l~~~~~~-~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p----~~~ 236 (304)
T cd07421 162 PHGSSDLIKAVPEEHKKFLRNLVWVHEE-DDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIP----KIA 236 (304)
T ss_pred CcchHHHHHhCCHHHHHHHHhCCceEEe-CcccccccccccccceEEEEcccCCCCChHHhhhhhhccccccc----ccc
Confidence 2 2345688999999998764 566 999999999998888877543 222222 248
Q ss_pred ccccC
Q 025598 195 LLWSD 199 (250)
Q Consensus 195 ~lW~~ 199 (250)
++|.+
T Consensus 237 ~l~~R 241 (304)
T cd07421 237 PLSGR 241 (304)
T ss_pred ccccc
Confidence 88884
No 27
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.95 E-value=1.1e-26 Score=197.30 Aligned_cols=122 Identities=23% Similarity=0.471 Sum_probs=97.0
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCC----------CCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCch
Q 025598 47 CPVTVCGDIHGQFHDLVELFRIGGNA----------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHE 116 (250)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~~----------~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE 116 (250)
+|++||||||||+.+|.++|+++++. +.+++||+||+|||||+|.+|++++++++. +.++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 58999999999999999999998654 257999999999999999999999999865 346999999999
Q ss_pred hhhhhhhhcC-------hHHHHHHhC--ChhHHHHHHHHhhccCcEEEEc-CcEEEEecCCCCC
Q 025598 117 SRQITQVYGF-------YDECLRKYG--NANVWKHFTDLFDYLPLTALIE-SQVFCLHGGLSPS 170 (250)
Q Consensus 117 ~~~~~~~~~~-------~~~~~~~~~--~~~~~~~~~~~l~~lp~~~~~~-~~~l~vHaGi~~~ 170 (250)
.++++...+. ..++..++. .....+...+||++||+...++ ++++|||||+++.
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 9987653221 122233332 2456678899999999987664 4799999998764
No 28
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.95 E-value=4.2e-27 Score=201.29 Aligned_cols=133 Identities=22% Similarity=0.346 Sum_probs=104.7
Q ss_pred EEEEeCCCCCHHHHHHHHHhcCCC-CCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcCh
Q 025598 49 VTVCGDIHGQFHDLVELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFY 127 (250)
Q Consensus 49 i~vigDIHG~~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~ 127 (250)
++||||||||+++|+++|+++++. +.|.+||+||+|||||+|.+|++++++++ .++++|+||||.++++..++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999998765 57999999999999999999999999984 3799999999999887654432
Q ss_pred ----HHHHHHhCChhHHHHHHHHhhccCcEEEEcC-cEEEEecCCCCCCCCHHHHHhcccccc
Q 025598 128 ----DECLRKYGNANVWKHFTDLFDYLPLTALIES-QVFCLHGGLSPSLDTLDNIRALDRIQE 185 (250)
Q Consensus 128 ----~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~-~~l~vHaGi~~~~~~~~~~~~~~~~~~ 185 (250)
.....++......++..+|++++|+...+++ ++++||||++|.++..+.....++.+.
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~~~~~~~a~eve~ 139 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSIEQALKLAREVEA 139 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCHHHHHHHHHHHHH
Confidence 1222233223345678999999999987654 799999999999866554444444433
No 29
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.94 E-value=1.2e-26 Score=194.89 Aligned_cols=117 Identities=21% Similarity=0.277 Sum_probs=90.4
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCCC-CCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhh
Q 025598 46 KCPVTVCGDIHGQFHDLVELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVY 124 (250)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~ 124 (250)
.+|++||||||||+++|.++|+.++.. ..|++||+||+|||||+|.+|++++.+. ++++|+||||.++++...
T Consensus 16 ~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~ 89 (218)
T PRK11439 16 WRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALA 89 (218)
T ss_pred CCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHH
Confidence 459999999999999999999998875 6789999999999999999999999753 588999999999886532
Q ss_pred cChH--------HHHHHhCC--hhHHHHHHHHhhccCcEEEE---cCcEEEEecCCC
Q 025598 125 GFYD--------ECLRKYGN--ANVWKHFTDLFDYLPLTALI---ESQVFCLHGGLS 168 (250)
Q Consensus 125 ~~~~--------~~~~~~~~--~~~~~~~~~~l~~lp~~~~~---~~~~l~vHaGi~ 168 (250)
+... +....... ......+.+|+++||+...+ ++++++||||++
T Consensus 90 ~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 90 SQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 2110 01111111 12345667899999998654 357999999973
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.93 E-value=7e-25 Score=182.84 Aligned_cols=119 Identities=24% Similarity=0.318 Sum_probs=92.4
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCC-CCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhc
Q 025598 47 CPVTVCGDIHGQFHDLVELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (250)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~ 125 (250)
+|+++|||||||+.+|+++++.++.. +.+.++++||++||||++.++++++.+. ++++|+||||.+++....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~~------~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLEP------WFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhcC------CEEEeECCChHHHHhHhhC
Confidence 58999999999999999999988754 5789999999999999999999988752 6999999999998875433
Q ss_pred C--hHHHHHHhCC--------hhHHHHHHHHhhccCcEEEEc---CcEEEEecCCCCCC
Q 025598 126 F--YDECLRKYGN--------ANVWKHFTDLFDYLPLTALIE---SQVFCLHGGLSPSL 171 (250)
Q Consensus 126 ~--~~~~~~~~~~--------~~~~~~~~~~l~~lp~~~~~~---~~~l~vHaGi~~~~ 171 (250)
. ..+...+.+. ....+...+||++||+...++ .++++||||+++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~ 133 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDD 133 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcch
Confidence 1 1122222221 124566888999999987653 36899999986543
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.92 E-value=4.9e-24 Score=179.01 Aligned_cols=117 Identities=21% Similarity=0.232 Sum_probs=87.2
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCC-CCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhh
Q 025598 46 KCPVTVCGDIHGQFHDLVELFRIGGN-APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVY 124 (250)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~-~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~ 124 (250)
.+|++||||||||+++|+++++.+.+ .+.|.+||+||+|||||+|.+|++++.+. ++++|+||||.+++....
T Consensus 14 ~~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~~------~~~~v~GNHE~~~~~~~~ 87 (218)
T PRK09968 14 YRHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQP------WFISVKGNHEAMALDAFE 87 (218)
T ss_pred CCeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhhC------CcEEEECchHHHHHHHHh
Confidence 35999999999999999999998874 45789999999999999999999988642 689999999999886432
Q ss_pred cChH--------HHHHHhCCh--hHHHHHHHHhhccCcEEEE---cCcEEEEecCCC
Q 025598 125 GFYD--------ECLRKYGNA--NVWKHFTDLFDYLPLTALI---ESQVFCLHGGLS 168 (250)
Q Consensus 125 ~~~~--------~~~~~~~~~--~~~~~~~~~l~~lp~~~~~---~~~~l~vHaGi~ 168 (250)
.-.. +...+.... ........|+++||+...+ +.++++||||++
T Consensus 88 ~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 88 TGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred cCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 1000 111111111 1223446699999988755 246899999983
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.57 E-value=6e-14 Score=110.09 Aligned_cols=160 Identities=18% Similarity=0.194 Sum_probs=100.9
Q ss_pred CCEEEEeCCCCCHHHH----HHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHH--HHhhhhcCCcEEEECCCchhhhh
Q 025598 47 CPVTVCGDIHGQFHDL----VELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLL--VALKVRYRDRITILRGNHESRQI 120 (250)
Q Consensus 47 ~~i~vigDIHG~~~~l----~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l--~~l~~~~p~~v~~l~GNHE~~~~ 120 (250)
+||++|||+|+..... ..+.......+.+.+|++||+++++..+....... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4899999999999887 44445555677899999999999999887766654 33333445579999999999875
Q ss_pred hhhhcChHHHHH---------------------------------HhCChhHHHHHHHHhhccCcEEEEcCcEEEEecCC
Q 025598 121 TQVYGFYDECLR---------------------------------KYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGL 167 (250)
Q Consensus 121 ~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHaGi 167 (250)
............ .............+.............++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 432211111110 00001111222223333333333356799999999
Q ss_pred CCCCCCHHHHHhccccccCCCCCccccccccCCCCCCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEEcccCC
Q 025598 168 SPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLV 241 (250)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~ 241 (250)
.+........ .....+...+..+++..++++++.||++.
T Consensus 161 ~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY-----------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH-----------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc-----------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 6654222111 11235577888999999999999999975
No 33
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.43 E-value=1.8e-12 Score=103.35 Aligned_cols=63 Identities=17% Similarity=0.209 Sum_probs=51.2
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCC-CCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhh
Q 025598 47 CPVTVCGDIHGQFHDLVELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~~-~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
||+++|||+||+..+++.+++..... +.|.++++||++ +.++++.+.++. .+++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 68999999999998888777766555 689999999998 457777776552 2599999999984
No 34
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.43 E-value=1.5e-12 Score=103.21 Aligned_cols=84 Identities=25% Similarity=0.404 Sum_probs=63.4
Q ss_pred CEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcCh
Q 025598 48 PVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFY 127 (250)
Q Consensus 48 ~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~ 127 (250)
|++++||+||+...+.++++.+.. .|.+|++||++++++.+. ++. ...+++|+||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~~--~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LEL--KAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hhc--CCcEEEEeCCCCCcCC-------
Confidence 589999999999999999988655 799999999999998665 111 2369999999997532
Q ss_pred HHHHHHhCChhHHHHHHHHhhccCcEEEE---cCcEEEEecCCCC
Q 025598 128 DECLRKYGNANVWKHFTDLFDYLPLTALI---ESQVFCLHGGLSP 169 (250)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~l~~lp~~~~~---~~~~l~vHaGi~~ 169 (250)
++.+|....+ +.+++++||...+
T Consensus 62 -------------------~~~~p~~~~~~~~g~~i~v~Hg~~~~ 87 (155)
T cd00841 62 -------------------FPILPEEAVLEIGGKRIFLTHGHLYG 87 (155)
T ss_pred -------------------cccCCceEEEEECCEEEEEECCcccc
Confidence 3445544332 2379999998643
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.39 E-value=3.4e-12 Score=100.73 Aligned_cols=123 Identities=20% Similarity=0.305 Sum_probs=81.6
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcC
Q 025598 47 CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGF 126 (250)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~ 126 (250)
||++++||+|++..++.++++.+ .+.+.+|++||+++ ..++++.+... ++++++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~----~~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFD----PEEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCS----HHHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchh----HHHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 68999999999999999999887 35899999999999 37777777655 59999999997653221110
Q ss_pred hHHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEecCCCCCCCCHHHHHhccccccCCCCCccccccccCCCCCCCC
Q 025598 127 YDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGW 206 (250)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHaGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~~~~~ 206 (250)
. + +....... ....+++++|+.+...
T Consensus 69 ~------~-----------~~~~~~~~-~~~~~i~~~H~~~~~~------------------------------------ 94 (156)
T PF12850_consen 69 E------Y-----------LLDALRLT-IDGFKILLSHGHPYDV------------------------------------ 94 (156)
T ss_dssp C------S-----------SHSEEEEE-ETTEEEEEESSTSSSS------------------------------------
T ss_pred c------c-----------cccceeee-ecCCeEEEECCCCccc------------------------------------
Confidence 0 0 12222221 2245899999976331
Q ss_pred CCCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCccC
Q 025598 207 GISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDG 244 (250)
Q Consensus 207 ~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G 244 (250)
..+.+.+.+.+...++++++.||+..+.-
T Consensus 95 ---------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~ 123 (156)
T PF12850_consen 95 ---------QWDPAELREILSRENVDLVLHGHTHRPQV 123 (156)
T ss_dssp ---------TTTHHHHHHHHHHTTSSEEEESSSSSEEE
T ss_pred ---------ccChhhhhhhhcccCCCEEEcCCcccceE
Confidence 02344555677788999999999987543
No 36
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.37 E-value=3.7e-12 Score=98.93 Aligned_cols=118 Identities=18% Similarity=0.155 Sum_probs=81.8
Q ss_pred CEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCChH--HHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhc
Q 025598 48 PVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSV--ETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (250)
Q Consensus 48 ~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~--evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~ 125 (250)
+++++||+||++. .....+.|.+|++||+++++.... +.++++.++. .| .+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-----
Confidence 5899999999987 123456799999999999876432 3555555442 12 36789999996421
Q ss_pred ChHHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEecCCCCCCCCHHHHHhccccccCCCCCccccccccCCCCCCC
Q 025598 126 FYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCG 205 (250)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHaGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~~~~ 205 (250)
.-+.+++++|+.+.+...+ .+.
T Consensus 66 -----------------------------~~~~~ilv~H~~p~~~~~~----------------------~~~------- 87 (135)
T cd07379 66 -----------------------------PEDTDILVTHGPPYGHLDL----------------------VSS------- 87 (135)
T ss_pred -----------------------------CCCCEEEEECCCCCcCccc----------------------ccc-------
Confidence 1145789999976332110 000
Q ss_pred CCCCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCccCcc
Q 025598 206 WGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYN 246 (250)
Q Consensus 206 ~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G~~ 246 (250)
....|...+.++++..+.++++.||+..+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 013567788888899999999999999998886
No 37
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.35 E-value=2.3e-11 Score=102.73 Aligned_cols=158 Identities=18% Similarity=0.189 Sum_probs=97.4
Q ss_pred CEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhh----
Q 025598 48 PVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQV---- 123 (250)
Q Consensus 48 ~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~---- 123 (250)
||+++|||||++.... .+.+...+.|.++++||+++ .+.+++..+.++ +..+++++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~--~~~l~~~~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k~ 72 (238)
T cd07397 2 RIAIVGDVHGQWDLED--IKALHLLQPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFRKKG 72 (238)
T ss_pred EEEEEecCCCCchHHH--HHHHhccCCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCcccccccccchH
Confidence 7899999999987642 22333445799999999986 456777776665 3469999999998653200
Q ss_pred --------------------------------hcC--------hH-HHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEE
Q 025598 124 --------------------------------YGF--------YD-ECLRKYGNANVWKHFTDLFDYLPLTALIESQVFC 162 (250)
Q Consensus 124 --------------------------------~~~--------~~-~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~ 162 (250)
.+| .. +....|+.....+.+...++.++.......++++
T Consensus 73 ~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vli 152 (238)
T cd07397 73 DRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLILL 152 (238)
T ss_pred HHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEEE
Confidence 000 01 3444555555566677777777533222347999
Q ss_pred EecCCCCCCCCHHHHHhccccccCCCCCccccccccCCCCCCCCCCCCCCCccccCHHHHHHHHHHcC----CcEEEEcc
Q 025598 163 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNG----LTLISRAH 238 (250)
Q Consensus 163 vHaGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~~~~~~~~~~g~~~~~g~~~~~~~l~~~~----~~~ivrgH 238 (250)
.|+++....+.. + + .+.-=|. . .| .-+|...+.+.+.... +++++-||
T Consensus 153 aH~~~~G~g~~~---~------~------~cg~d~~---------~--~~--~~~G~~~l~~ai~~~~~~~~~~l~~fGH 204 (238)
T cd07397 153 AHNGPSGLGSDA---E------D------PCGRDWK---------P--PG--GDWGDPDLALAISQIQQGRQVPLVVFGH 204 (238)
T ss_pred eCcCCcCCCccc---c------c------ccccccC---------C--cC--CCCCCHHHHHHHHHHhccCCCCEEEeCC
Confidence 999985543211 0 0 0221221 1 11 2367777766666544 79999999
Q ss_pred cCCc
Q 025598 239 QLVM 242 (250)
Q Consensus 239 ~~~~ 242 (250)
-...
T Consensus 205 ~H~~ 208 (238)
T cd07397 205 MHHR 208 (238)
T ss_pred ccCc
Confidence 8776
No 38
>PRK09453 phosphodiesterase; Provisional
Probab=99.32 E-value=4.2e-12 Score=103.69 Aligned_cols=69 Identities=22% Similarity=0.314 Sum_probs=58.0
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCC--------hHHHHHHHHHhhhhcCCcEEEECCCchhh
Q 025598 47 CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYY--------SVETVTLLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~--------~~evl~~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
||+.+|||+||++.+++++++.+...+.+.+|++||++++|++ +.++++.+.++ ..++++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcch
Confidence 6899999999999999999988766778999999999999873 56677777654 23699999999975
Q ss_pred h
Q 025598 119 Q 119 (250)
Q Consensus 119 ~ 119 (250)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 4
No 39
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.21 E-value=1.3e-10 Score=94.51 Aligned_cols=65 Identities=22% Similarity=0.312 Sum_probs=48.5
Q ss_pred EEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCCh-HHHHHHHHHhhhhcCCcEEEECCCchhhh
Q 025598 49 VTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYS-VETVTLLVALKVRYRDRITILRGNHESRQ 119 (250)
Q Consensus 49 i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~-~evl~~l~~l~~~~p~~v~~l~GNHE~~~ 119 (250)
|+++||+||++..+.+ ..+...+.|.+|++||++++|... .+.++.+.++ +..+++++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~----~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAI----GVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhc----CCCEEEEcCCCCCHH
Confidence 5789999999999887 334455679999999999998753 3333444333 446999999999754
No 40
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.14 E-value=1.3e-10 Score=97.86 Aligned_cols=72 Identities=11% Similarity=0.155 Sum_probs=60.6
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhh
Q 025598 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
.+++.++||+||++.+++++++.+...+.|.+|++||++++|+...++..++..+... +..+++++||||..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 3589999999999999999998776677899999999999998777777777666433 23599999999986
No 41
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=99.12 E-value=1e-09 Score=89.42 Aligned_cols=62 Identities=24% Similarity=0.336 Sum_probs=43.8
Q ss_pred CEEEEeCCC-CCHH-HHH-HHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhh
Q 025598 48 PVTVCGDIH-GQFH-DLV-ELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 48 ~i~vigDIH-G~~~-~l~-~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
+|.||||.| |... .+. .+++.+...+.|.++.+||+++ .++++++.++. + ++++|+||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~-----~~~~~~l~~~~---~-~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCS-----KETYDYLKTIA---P-DVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCC-----HHHHHHHHhhC---C-ceEEEECCCCcc
Confidence 588999999 6533 122 2333333356789999999987 67788776652 2 599999999974
No 42
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.07 E-value=2.1e-09 Score=81.03 Aligned_cols=117 Identities=23% Similarity=0.343 Sum_probs=82.9
Q ss_pred EEEeCCCCCHHHHHHHH--HhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcCh
Q 025598 50 TVCGDIHGQFHDLVELF--RIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFY 127 (250)
Q Consensus 50 ~vigDIHG~~~~l~~ll--~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~ 127 (250)
+++||+|+......... ......+.+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999998887765 44455677899999999999887666544322222223447999999999
Q ss_pred HHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEecCCCCCCCCHHHHHhccccccCCCCCccccccccCCCCCCCCC
Q 025598 128 DECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWG 207 (250)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHaGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~~~~~~ 207 (250)
++++|+++.+..... .+..
T Consensus 70 --------------------------------i~~~H~~~~~~~~~~---------------------~~~~-------- 88 (131)
T cd00838 70 --------------------------------ILLTHGPPYDPLDEL---------------------SPDE-------- 88 (131)
T ss_pred --------------------------------EEEeccCCCCCchhh---------------------cccc--------
Confidence 899999985543111 0000
Q ss_pred CCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCccCcc
Q 025598 208 ISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYN 246 (250)
Q Consensus 208 ~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G~~ 246 (250)
..............+.+.++.||+.....+.
T Consensus 89 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 89 --------DPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------hhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 0046677778888999999999998877654
No 43
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.01 E-value=6.6e-09 Score=88.56 Aligned_cols=71 Identities=17% Similarity=0.217 Sum_probs=49.8
Q ss_pred CCEEEEeCCCCCH------HHHHHHHHhcCCCCCCeEEEeccccCC-------CCChHHHHHHHHHhhhhcCCcEEEECC
Q 025598 47 CPVTVCGDIHGQF------HDLVELFRIGGNAPDTNYLFMGDYVDR-------GYYSVETVTLLVALKVRYRDRITILRG 113 (250)
Q Consensus 47 ~~i~vigDIHG~~------~~l~~ll~~~~~~~~~~~vflGD~vdr-------G~~~~evl~~l~~l~~~~p~~v~~l~G 113 (250)
|++++|||+|... .++.+.++.. ..+.+.++++||++|. .+...++++++.+++.. +..+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 6899999999542 2344444332 2457899999999985 22345677777777643 236999999
Q ss_pred Cchhhh
Q 025598 114 NHESRQ 119 (250)
Q Consensus 114 NHE~~~ 119 (250)
|||...
T Consensus 79 NHD~~~ 84 (241)
T PRK05340 79 NRDFLL 84 (241)
T ss_pred CCchhh
Confidence 999753
No 44
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.01 E-value=5.8e-10 Score=89.47 Aligned_cols=67 Identities=21% Similarity=0.182 Sum_probs=48.1
Q ss_pred EEEEeCCCCCHHHHHHHH-HhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhh
Q 025598 49 VTVCGDIHGQFHDLVELF-RIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 49 i~vigDIHG~~~~l~~ll-~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
+.++||+|++.......+ +.....+.|.++++||+++++....... ++... ..+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~--~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLAL--KGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhh--cCCccEEEeCCCcceE
Confidence 468999999987776655 3344566789999999999887655443 22222 2234699999999986
No 45
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.95 E-value=1.5e-08 Score=79.21 Aligned_cols=117 Identities=21% Similarity=0.214 Sum_probs=78.5
Q ss_pred EEEEeCCCCCHH------H----HHHHHHhcCCCCCCeEEEeccccCCCCCh--HHHHHHHHHhhhhcCCcEEEECCCch
Q 025598 49 VTVCGDIHGQFH------D----LVELFRIGGNAPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYRDRITILRGNHE 116 (250)
Q Consensus 49 i~vigDIHG~~~------~----l~~ll~~~~~~~~~~~vflGD~vdrG~~~--~evl~~l~~l~~~~p~~v~~l~GNHE 116 (250)
|+.|||+|-... . |.++++.+...+.+.++++||+++.|... ....+++..+.... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 578999994221 1 12345555566789999999999988742 23445555554321 26999999999
Q ss_pred hhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEecCCCCCCCCHHHHHhccccccCCCCCcccccc
Q 025598 117 SRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLL 196 (250)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHaGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (250)
. ++++|..+.+....
T Consensus 80 ~------------------------------------------iv~~Hhp~~~~~~~----------------------- 94 (144)
T cd07400 80 V------------------------------------------IVVLHHPLVPPPGS----------------------- 94 (144)
T ss_pred E------------------------------------------EEEecCCCCCCCcc-----------------------
Confidence 7 78899887443210
Q ss_pred ccCCCCCCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCccCcc
Q 025598 197 WSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYN 246 (250)
Q Consensus 197 W~~p~~~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G~~ 246 (250)
|. ... .+...+.+++++.+++++++||+..+..+.
T Consensus 95 ~~---------~~~------~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 95 GR---------ERL------LDAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred cc---------ccC------CCHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 00 000 146678888999999999999999877655
No 46
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.93 E-value=1.1e-08 Score=78.92 Aligned_cols=107 Identities=20% Similarity=0.111 Sum_probs=74.8
Q ss_pred EEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChHH
Q 025598 50 TVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDE 129 (250)
Q Consensus 50 ~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~ 129 (250)
.||||.||..+.+.++... ..+.|.++++||+. .++++.+.++. +..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------------
Confidence 4899999998777776654 46789999999973 34555555541 224899999999
Q ss_pred HHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEecCCCCCCCCHHHHHhccccccCCCCCccccccccCCCCCCCCCCC
Q 025598 130 CLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGIS 209 (250)
Q Consensus 130 ~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHaGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~~~~~~~~ 209 (250)
-+++++|+-+.+.... .+
T Consensus 57 ----------------------------~~Ilv~H~pp~~~~~~-------------------~~--------------- 74 (129)
T cd07403 57 ----------------------------VDILLTHAPPAGIGDG-------------------ED--------------- 74 (129)
T ss_pred ----------------------------cCEEEECCCCCcCcCc-------------------cc---------------
Confidence 3689999854211100 00
Q ss_pred CCCCccccCHHHHHHHHHHcCCcEEEEcccCCccCcc
Q 025598 210 PRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYN 246 (250)
Q Consensus 210 ~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G~~ 246 (250)
....|...+.+++...+.+.++.||+..+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 012356777788888899999999999876654
No 47
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.81 E-value=1.5e-07 Score=78.05 Aligned_cols=161 Identities=18% Similarity=0.211 Sum_probs=101.5
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEecccc--CCCCChHHHHH-HHHHhhhhcCCcEEEECCCchhhhhhh
Q 025598 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYV--DRGYYSVETVT-LLVALKVRYRDRITILRGNHESRQITQ 122 (250)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~v--drG~~~~evl~-~l~~l~~~~p~~v~~l~GNHE~~~~~~ 122 (250)
++++.+++|+||..+.+.+++..+.....|.+|+.||+. +.|+.-...-. .+..++.. --.++.++||.|...+..
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~~-~~~v~avpGNcD~~~v~~ 81 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKEL-GIPVLAVPGNCDPPEVID 81 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHhc-CCeEEEEcCCCChHHHHH
Confidence 579999999999999999999988888899999999999 87774332221 13344322 236999999999876532
Q ss_pred hhc-----------------Ch---------HHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEecCCCCCCCCHHH
Q 025598 123 VYG-----------------FY---------DECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDN 176 (250)
Q Consensus 123 ~~~-----------------~~---------~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHaGi~~~~~~~~~ 176 (250)
... |. ..+...++.+.++......+...-- ..+++..|+-+-...
T Consensus 82 ~l~~~~~~v~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~----~~~Il~~HaPP~gt~----- 152 (226)
T COG2129 82 VLKNAGVNVHGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN----PVNILLTHAPPYGTL----- 152 (226)
T ss_pred HHHhcccccccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC----cceEEEecCCCCCcc-----
Confidence 110 00 0011122222333333333332210 012666676653322
Q ss_pred HHhccccccCCCCCccccccccCCCCCCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCccCccc
Q 025598 177 IRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNW 247 (250)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~lW~~p~~~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G~~~ 247 (250)
.| .+.| -.-.|..+++++.+..+....++||-....|.+.
T Consensus 153 ----------------~d--------------~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~ 192 (226)
T COG2129 153 ----------------LD--------------TPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDK 192 (226)
T ss_pred ----------------cc--------------CCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccc
Confidence 11 1111 1247899999999999999999999998888764
No 48
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.77 E-value=1.3e-08 Score=86.20 Aligned_cols=68 Identities=10% Similarity=0.110 Sum_probs=44.7
Q ss_pred EEEEeCCCCCH------HHHHHHHHhcCCCCCCeEEEeccccCCC-----CC--hHHHHHHHHHhhhhcCCcEEEECCCc
Q 025598 49 VTVCGDIHGQF------HDLVELFRIGGNAPDTNYLFMGDYVDRG-----YY--SVETVTLLVALKVRYRDRITILRGNH 115 (250)
Q Consensus 49 i~vigDIHG~~------~~l~~ll~~~~~~~~~~~vflGD~vdrG-----~~--~~evl~~l~~l~~~~p~~v~~l~GNH 115 (250)
+++|||+|... ..+.+.+.... .+.|.++++||++|.. +. ..++.+.+..++.. +..+++++|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~-~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEA-RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 37899999643 23334443322 2679999999999852 11 23456666666543 34699999999
Q ss_pred hhh
Q 025598 116 ESR 118 (250)
Q Consensus 116 E~~ 118 (250)
|..
T Consensus 79 D~~ 81 (231)
T TIGR01854 79 DFL 81 (231)
T ss_pred chh
Confidence 975
No 49
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.75 E-value=8.4e-08 Score=81.20 Aligned_cols=67 Identities=25% Similarity=0.271 Sum_probs=48.0
Q ss_pred CEEEEeCCCCC------------HHHHHHHHHhcCCC--CCCeEEEeccccCCCCCh--HHHHHHHHHhhhhcCCcEEEE
Q 025598 48 PVTVCGDIHGQ------------FHDLVELFRIGGNA--PDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYRDRITIL 111 (250)
Q Consensus 48 ~i~vigDIHG~------------~~~l~~ll~~~~~~--~~~~~vflGD~vdrG~~~--~evl~~l~~l~~~~p~~v~~l 111 (250)
|++++||+|-. ...++++++.+... +.+.+|++||+++.|... ..+++.+.++ +..++++
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 68999999954 34677777766554 778999999999986532 2233333333 3469999
Q ss_pred CCCchhh
Q 025598 112 RGNHESR 118 (250)
Q Consensus 112 ~GNHE~~ 118 (250)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 50
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.73 E-value=3.1e-08 Score=85.95 Aligned_cols=71 Identities=18% Similarity=0.149 Sum_probs=55.4
Q ss_pred CCCEEEEeCCCCC----HHHHHHHHHhcCCCCCCeEEEeccccCCC--CChHHHHHHHHHhhhhcCCcEEEECCCchhh
Q 025598 46 KCPVTVCGDIHGQ----FHDLVELFRIGGNAPDTNYLFMGDYVDRG--YYSVETVTLLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 46 ~~~i~vigDIHG~----~~~l~~ll~~~~~~~~~~~vflGD~vdrG--~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
+.|++++||+|.. ...+.++++.+...+.|.++++||++|++ .+..++.+.+..++... .++.+.||||..
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~--pv~~V~GNHD~~ 125 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECA--PTFACFGNHDRP 125 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcC--CEEEecCCCCcc
Confidence 4689999999986 55678888777777889999999999953 23445667777776543 499999999974
No 51
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.70 E-value=2.9e-08 Score=83.12 Aligned_cols=72 Identities=21% Similarity=0.161 Sum_probs=55.8
Q ss_pred CCCEEEEeCCCCCHH----HHHHHHHhcCCCCCCeEEEeccccCCCCChH-HHHHHHHHhhhhcCCcEEEECCCchhhh
Q 025598 46 KCPVTVCGDIHGQFH----DLVELFRIGGNAPDTNYLFMGDYVDRGYYSV-ETVTLLVALKVRYRDRITILRGNHESRQ 119 (250)
Q Consensus 46 ~~~i~vigDIHG~~~----~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~-evl~~l~~l~~~~p~~v~~l~GNHE~~~ 119 (250)
.++++++||+|+... .+.++++.+.....|.++++||+++.+.... .+.+++..+.. +..++++.||||...
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~--~~~v~~v~GNHD~~~ 77 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKA--PLGVYAVLGNHDYYS 77 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCC--CCCEEEECCCccccc
Confidence 368999999998743 6778887776667899999999999887664 56666665543 335999999999854
No 52
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.68 E-value=1.6e-07 Score=78.65 Aligned_cols=148 Identities=16% Similarity=0.133 Sum_probs=83.6
Q ss_pred CEEEEeCCCCC----HHHH----HHHHHhcCCCCCCeEEEeccccCCCCChHH---HHHHHHHhhhhcCCcEEEECCCch
Q 025598 48 PVTVCGDIHGQ----FHDL----VELFRIGGNAPDTNYLFMGDYVDRGYYSVE---TVTLLVALKVRYRDRITILRGNHE 116 (250)
Q Consensus 48 ~i~vigDIHG~----~~~l----~~ll~~~~~~~~~~~vflGD~vdrG~~~~e---vl~~l~~l~~~~p~~v~~l~GNHE 116 (250)
+++++||+|-- ...+ ..+++.+...+.+.+|++||+++.+....+ ..+.+..+.. .+-.+++++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~-~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDK-AGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHH-cCCcEEEECCCCc
Confidence 68999999952 2233 334455545567999999999999884432 2333444431 1235899999999
Q ss_pred hhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEecCCCCCCCCHHHHHhccccccCCCCCcccccc
Q 025598 117 SRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLL 196 (250)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHaGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (250)
..+... .. ......+.+.+.|+..|- ..-++++|--+.+..... ....
T Consensus 81 ~~~~ld-~~---------~~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~~~------------------~~~~ 128 (214)
T cd07399 81 LVLALE-FG---------PRDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDSRP------------------DSID 128 (214)
T ss_pred chhhCC-CC---------CCHHHHHHHHHHHHHCCC----CCEEEEecccccCCCCcC------------------cccc
Confidence 432211 10 012233344444554331 134788888764322100 0011
Q ss_pred ccCCCCCCCCCCCCCCCccccCHHHHHHHHHHc-CCcEEEEcccCCc
Q 025598 197 WSDPDDRCGWGISPRGAGYTFGQDIASQFNHTN-GLTLISRAHQLVM 242 (250)
Q Consensus 197 W~~p~~~~~~~~~~~g~~~~~g~~~~~~~l~~~-~~~~ivrgH~~~~ 242 (250)
| | .....+...+.++++++ +++.++.||....
T Consensus 129 ~--------~------~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~ 161 (214)
T cd07399 129 Y--------D------SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGA 161 (214)
T ss_pred c--------c------cccccHHHHHHHHHhCCCCEEEEEccccCCC
Confidence 1 1 01124456677888887 8999999998653
No 53
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.65 E-value=2.5e-07 Score=74.69 Aligned_cols=65 Identities=17% Similarity=0.229 Sum_probs=47.9
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhh
Q 025598 47 CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQ 119 (250)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~ 119 (250)
|++.|+||.||...+..+..+.....+.|.+|.+||++...... .+.. ....+++.|+||.|...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~-----~l~~---~~~~~i~~V~GN~D~~~ 66 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD-----ALEG---GLAAKLIAVRGNCDGEV 66 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH-----Hhhc---ccccceEEEEccCCCcc
Confidence 68999999999997656566655566789999999999865422 1211 01347999999999864
No 54
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.64 E-value=7.2e-07 Score=77.48 Aligned_cols=72 Identities=14% Similarity=0.103 Sum_probs=49.4
Q ss_pred cCCCEEEEeCCCC------------CHHHHHHHHHhcCC--CCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEE
Q 025598 45 VKCPVTVCGDIHG------------QFHDLVELFRIGGN--APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITI 110 (250)
Q Consensus 45 ~~~~i~vigDIHG------------~~~~l~~ll~~~~~--~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~ 110 (250)
.+++++.|+|+|= ....|.++++.+.. .+.|.+|+.||+++.|. .+-+..+.+.....+..+++
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~ 90 (275)
T PRK11148 13 ARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVW 90 (275)
T ss_pred CCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEE
Confidence 3468999999992 24667788876543 35689999999999874 22233333322233456999
Q ss_pred ECCCchhh
Q 025598 111 LRGNHESR 118 (250)
Q Consensus 111 l~GNHE~~ 118 (250)
++||||..
T Consensus 91 v~GNHD~~ 98 (275)
T PRK11148 91 LPGNHDFQ 98 (275)
T ss_pred eCCCCCCh
Confidence 99999974
No 55
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.64 E-value=3.1e-07 Score=75.87 Aligned_cols=70 Identities=13% Similarity=0.099 Sum_probs=45.9
Q ss_pred CCEEEEeCCCCCHH------------HHHHHHHhcCCCCCCeEEEeccccCCCCCh---HHHHHHHHHhhhhcCCcEEEE
Q 025598 47 CPVTVCGDIHGQFH------------DLVELFRIGGNAPDTNYLFMGDYVDRGYYS---VETVTLLVALKVRYRDRITIL 111 (250)
Q Consensus 47 ~~i~vigDIHG~~~------------~l~~ll~~~~~~~~~~~vflGD~vdrG~~~---~evl~~l~~l~~~~p~~v~~l 111 (250)
.++++|+|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..+.+......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 57999999996322 122232334455679999999999876643 455555444333333368999
Q ss_pred CCCch
Q 025598 112 RGNHE 116 (250)
Q Consensus 112 ~GNHE 116 (250)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 56
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.52 E-value=2.4e-07 Score=78.84 Aligned_cols=68 Identities=19% Similarity=0.167 Sum_probs=50.7
Q ss_pred CEEEEeCCCCCH------HHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhh
Q 025598 48 PVTVCGDIHGQF------HDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 48 ~i~vigDIHG~~------~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
||+++||+|+++ ..+.++++.+...+.|.+|++||+++..+.+.++++.+.++ .+..+++++||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 589999999763 23566777666667899999999999876565555555543 233699999999964
No 57
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.51 E-value=5.4e-06 Score=71.28 Aligned_cols=72 Identities=13% Similarity=-0.017 Sum_probs=46.2
Q ss_pred CCEEEEeCCCCCH----------------HHHHHHHHhcCCC--CCCeEEEeccccCCCCChH---HHHHHHHHhhhhc-
Q 025598 47 CPVTVCGDIHGQF----------------HDLVELFRIGGNA--PDTNYLFMGDYVDRGYYSV---ETVTLLVALKVRY- 104 (250)
Q Consensus 47 ~~i~vigDIHG~~----------------~~l~~ll~~~~~~--~~~~~vflGD~vdrG~~~~---evl~~l~~l~~~~- 104 (250)
-+++++||+|-.. ..+.++++.+... +.+.++++||+++.|.... +....+.+.....
T Consensus 5 ~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (262)
T cd07395 5 FYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLD 84 (262)
T ss_pred EEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhcc
Confidence 3688999999763 1245555555443 6789999999999887542 1222222221111
Q ss_pred -CCcEEEECCCchhh
Q 025598 105 -RDRITILRGNHESR 118 (250)
Q Consensus 105 -p~~v~~l~GNHE~~ 118 (250)
+-.++.++||||..
T Consensus 85 ~~vp~~~i~GNHD~~ 99 (262)
T cd07395 85 PDIPLVCVCGNHDVG 99 (262)
T ss_pred CCCcEEEeCCCCCCC
Confidence 23699999999974
No 58
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.47 E-value=4e-07 Score=78.21 Aligned_cols=72 Identities=21% Similarity=0.207 Sum_probs=51.2
Q ss_pred CCEEEEeCCCC-C-----------HHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHH----HHHHHHhhhhcCCcEEE
Q 025598 47 CPVTVCGDIHG-Q-----------FHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVET----VTLLVALKVRYRDRITI 110 (250)
Q Consensus 47 ~~i~vigDIHG-~-----------~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~ev----l~~l~~l~~~~p~~v~~ 110 (250)
||++.+||+|- . ...|.++++.+...+.|.+++.||++|+...+.+. .+++..++...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 68999999994 2 23456666666566789999999999987554433 34555554433246999
Q ss_pred ECCCchhh
Q 025598 111 LRGNHESR 118 (250)
Q Consensus 111 l~GNHE~~ 118 (250)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999985
No 59
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.45 E-value=6.4e-07 Score=77.46 Aligned_cols=72 Identities=18% Similarity=0.239 Sum_probs=51.8
Q ss_pred CEEEEeCCC--C-----------CHHHHHHHHHhcCCCCCCeEEEeccccCCCCC-hHHHHHHHHHhhhhcCCcEEEECC
Q 025598 48 PVTVCGDIH--G-----------QFHDLVELFRIGGNAPDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYRDRITILRG 113 (250)
Q Consensus 48 ~i~vigDIH--G-----------~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~-~~evl~~l~~l~~~~p~~v~~l~G 113 (250)
|+++|||+| . ....+.++++.+...+.+.+|++||+++.|.. +.+-++.+.+.....+-.+++++|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 789999999 2 24567777877766668999999999988863 334444444433333346999999
Q ss_pred Cchhhh
Q 025598 114 NHESRQ 119 (250)
Q Consensus 114 NHE~~~ 119 (250)
|||...
T Consensus 82 NHD~~~ 87 (267)
T cd07396 82 NHDLYN 87 (267)
T ss_pred cccccc
Confidence 999864
No 60
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.43 E-value=5.7e-06 Score=71.17 Aligned_cols=70 Identities=19% Similarity=0.077 Sum_probs=44.4
Q ss_pred EEEEeCCCCCHH------HH-HHHHHhcCCCCCCeEEEeccccCCCCC--------hH---HHHHHHHHhhhhcCCcEEE
Q 025598 49 VTVCGDIHGQFH------DL-VELFRIGGNAPDTNYLFMGDYVDRGYY--------SV---ETVTLLVALKVRYRDRITI 110 (250)
Q Consensus 49 i~vigDIHG~~~------~l-~~ll~~~~~~~~~~~vflGD~vdrG~~--------~~---evl~~l~~l~~~~p~~v~~ 110 (250)
++.++|+|-... .. ..+++.+...+.+.+|++||++|+... .. +.++.+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 578999996321 12 334555666678999999999997652 11 2223222222222346999
Q ss_pred ECCCchhh
Q 025598 111 LRGNHESR 118 (250)
Q Consensus 111 l~GNHE~~ 118 (250)
++||||..
T Consensus 82 v~GNHD~~ 89 (256)
T cd07401 82 IRGNHDLF 89 (256)
T ss_pred eCCCCCcC
Confidence 99999995
No 61
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.43 E-value=5.1e-07 Score=75.23 Aligned_cols=70 Identities=21% Similarity=0.199 Sum_probs=39.9
Q ss_pred EEEeCCCCCH---HH---HHHHHHhcCCCCCCeEEEeccccCC--CC---C---hHHHHHHHHHhhhhcCCcEEEECCCc
Q 025598 50 TVCGDIHGQF---HD---LVELFRIGGNAPDTNYLFMGDYVDR--GY---Y---SVETVTLLVALKVRYRDRITILRGNH 115 (250)
Q Consensus 50 ~vigDIHG~~---~~---l~~ll~~~~~~~~~~~vflGD~vdr--G~---~---~~evl~~l~~l~~~~p~~v~~l~GNH 115 (250)
++|||+|-.. .. +..++......+.+.+|++||++|. ++ . ..+.+..+..+.. ....++++.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLAD-RGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHH-CCCeEEEECCCc
Confidence 5899999322 11 2222222212467999999999974 11 1 1122233333322 234799999999
Q ss_pred hhhhh
Q 025598 116 ESRQI 120 (250)
Q Consensus 116 E~~~~ 120 (250)
|..+.
T Consensus 80 D~~~~ 84 (217)
T cd07398 80 DFLLG 84 (217)
T ss_pred hHHHH
Confidence 98653
No 62
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.35 E-value=1.1e-06 Score=78.60 Aligned_cols=72 Identities=21% Similarity=0.286 Sum_probs=50.0
Q ss_pred CCEEEEeCCC-C-----------CHHHHHHHHHhcCCCCCCeEEEeccccCCC-CChHHHHHHHHH----hhhhcCCcEE
Q 025598 47 CPVTVCGDIH-G-----------QFHDLVELFRIGGNAPDTNYLFMGDYVDRG-YYSVETVTLLVA----LKVRYRDRIT 109 (250)
Q Consensus 47 ~~i~vigDIH-G-----------~~~~l~~ll~~~~~~~~~~~vflGD~vdrG-~~~~evl~~l~~----l~~~~p~~v~ 109 (250)
||++.+||+| | ....|.++++.+...+.|.++++||++|+. +.+..++.++.. .....+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 6899999999 3 124455666666667789999999999985 445455444433 2122234699
Q ss_pred EECCCchhh
Q 025598 110 ILRGNHESR 118 (250)
Q Consensus 110 ~l~GNHE~~ 118 (250)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 63
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.30 E-value=2.1e-06 Score=80.72 Aligned_cols=115 Identities=20% Similarity=0.275 Sum_probs=63.0
Q ss_pred CCCEEEEeCCC-CCH----HHHHHHHHhcC---------CCCCCeEEEeccccCC-CCCh---------------HHHHH
Q 025598 46 KCPVTVCGDIH-GQF----HDLVELFRIGG---------NAPDTNYLFMGDYVDR-GYYS---------------VETVT 95 (250)
Q Consensus 46 ~~~i~vigDIH-G~~----~~l~~ll~~~~---------~~~~~~~vflGD~vdr-G~~~---------------~evl~ 95 (250)
+.++++|||+| |.. ..+..+++.+. ....+.+|++||++|. |+.+ .++.+
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 45799999999 542 33455554433 2345789999999984 3221 13455
Q ss_pred HHHHhhhhcCCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEc-CcEEEEecCC
Q 025598 96 LLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIE-SQVFCLHGGL 167 (250)
Q Consensus 96 ~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~-~~~l~vHaGi 167 (250)
+|.++... -.+++++||||.............+..+.-. +.-..++.. |....++ .+++++||-.
T Consensus 323 ~L~~L~~~--i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~----~~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 323 YLKQIPED--IKIIISPGNHDAVRQAEPQPAFPEEIRSLFP----EHNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHhhhcC--CeEEEecCCCcchhhccCCCCccHHHHHhcC----cCCeEEecC-CeEEEECCEEEEEECCCC
Confidence 55555322 2599999999976533221111111111100 011233444 5443333 3789999875
No 64
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.28 E-value=3.5e-06 Score=70.62 Aligned_cols=170 Identities=15% Similarity=0.194 Sum_probs=88.7
Q ss_pred EEEeCCCCC------HHHHHHHHHhcCCCCCCeEEEeccccCC--CCC-----hHHHHHHHHHhhhhcCCcEEEECCCch
Q 025598 50 TVCGDIHGQ------FHDLVELFRIGGNAPDTNYLFMGDYVDR--GYY-----SVETVTLLVALKVRYRDRITILRGNHE 116 (250)
Q Consensus 50 ~vigDIHG~------~~~l~~ll~~~~~~~~~~~vflGD~vdr--G~~-----~~evl~~l~~l~~~~p~~v~~l~GNHE 116 (250)
++|||+|=. .+.|.+.|+... ...+.+.++||++|- |.+ -.+|...|..+..+ ..+++++.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~-G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARK-GTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhc-CCeEEEecCchH
Confidence 479999965 234455555432 356899999999852 322 23466666665433 347999999999
Q ss_pred hhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcE---EEEcCcEEEEecCCCCCCCCHHHHHhcccccc--------
Q 025598 117 SRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLT---ALIESQVFCLHGGLSPSLDTLDNIRALDRIQE-------- 185 (250)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~---~~~~~~~l~vHaGi~~~~~~~~~~~~~~~~~~-------- 185 (250)
..+ ...+ ....|. +.-+|-. ...+.+++++||..-..... .-.......+
T Consensus 79 fll-~~~f------~~~~g~----------~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~--~y~~~r~~~~~~~~~~lf 139 (237)
T COG2908 79 FLL-GKRF------AQEAGG----------MTLLPDPIVLDLYGKRILLAHGDTFCTDDR--AYQWFRYKVHWAWLQLLF 139 (237)
T ss_pred HHH-HHHH------HhhcCc----------eEEcCcceeeeecCcEEEEEeCCcccchHH--HHHHHHHHcccHHHHHHH
Confidence 543 2111 111111 1222322 22267899999986322110 0000000000
Q ss_pred --CCCC--CccccccccCCCCCCCCCCCCCC--Ccc-ccCHHHHHHHHHHcCCcEEEEcccCCccC
Q 025598 186 --VPHE--GPMCDLLWSDPDDRCGWGISPRG--AGY-TFGQDIASQFNHTNGLTLISRAHQLVMDG 244 (250)
Q Consensus 186 --~~~~--~~~~~~lW~~p~~~~~~~~~~~g--~~~-~~g~~~~~~~l~~~~~~~ivrgH~~~~~G 244 (250)
.+.. -....-+|+. ..|...... ..+ -.....+.+-++++|++.+|+||+..+..
T Consensus 140 lnl~l~~R~ri~~k~r~~----s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai 201 (237)
T COG2908 140 LNLPLRVRRRIAYKIRSL----SSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAI 201 (237)
T ss_pred HHhHHHHHHHHHHHHHHh----hHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhh
Confidence 0000 0012224442 122222111 111 24577778889999999999999987654
No 65
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=98.27 E-value=2.3e-06 Score=68.92 Aligned_cols=67 Identities=27% Similarity=0.412 Sum_probs=46.3
Q ss_pred EEEEeCCCCCHHHH---------------HHHHHhcCC--CCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEE
Q 025598 49 VTVCGDIHGQFHDL---------------VELFRIGGN--APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITIL 111 (250)
Q Consensus 49 i~vigDIHG~~~~l---------------~~ll~~~~~--~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l 111 (250)
.++|||+|=....- .++++.+.. .+.+.+|++||++++++.+.. ++++.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 47899999766532 234433322 356899999999999886544 5555544 4469999
Q ss_pred CCCchhhhh
Q 025598 112 RGNHESRQI 120 (250)
Q Consensus 112 ~GNHE~~~~ 120 (250)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997653
No 66
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=98.24 E-value=2.8e-06 Score=70.74 Aligned_cols=72 Identities=24% Similarity=0.199 Sum_probs=49.9
Q ss_pred CEEEEeCCCC-CH--------------HHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHH----HHHHhhhhcCCcE
Q 025598 48 PVTVCGDIHG-QF--------------HDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVT----LLVALKVRYRDRI 108 (250)
Q Consensus 48 ~i~vigDIHG-~~--------------~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~----~l~~l~~~~p~~v 108 (250)
|++.+||+|= .. ..|.++++.+...+.+.+|++||+++....+.+.+. .+.+++. ....+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKE-AGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHH-CCCCE
Confidence 6899999993 21 246677777666778899999999998765444333 3333321 13369
Q ss_pred EEECCCchhhhh
Q 025598 109 TILRGNHESRQI 120 (250)
Q Consensus 109 ~~l~GNHE~~~~ 120 (250)
+++.||||....
T Consensus 80 ~~~~GNHD~~~~ 91 (223)
T cd00840 80 FIIAGNHDSPSR 91 (223)
T ss_pred EEecCCCCCccc
Confidence 999999998653
No 67
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=98.22 E-value=3e-06 Score=68.43 Aligned_cols=57 Identities=18% Similarity=0.162 Sum_probs=35.4
Q ss_pred HHHHHHhcCCCCCCeEEEeccccCCCCCh-HHHHHH--HHHhhhhcCCcEEEECCCchhhh
Q 025598 62 LVELFRIGGNAPDTNYLFMGDYVDRGYYS-VETVTL--LVALKVRYRDRITILRGNHESRQ 119 (250)
Q Consensus 62 l~~ll~~~~~~~~~~~vflGD~vdrG~~~-~evl~~--l~~l~~~~p~~v~~l~GNHE~~~ 119 (250)
+.++.+.+...+.+.+|++||+++....+ .+.... +..+. ..+..+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLL-AKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhc-cCCCeEEEEcccCccch
Confidence 34555555556789999999999864422 222222 12221 22347999999999864
No 68
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.13 E-value=8.2e-06 Score=74.49 Aligned_cols=74 Identities=16% Similarity=0.173 Sum_probs=57.8
Q ss_pred CCCEEEEeCCCCC------------HHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhh----------
Q 025598 46 KCPVTVCGDIHGQ------------FHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVR---------- 103 (250)
Q Consensus 46 ~~~i~vigDIHG~------------~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~---------- 103 (250)
.+||++++|+|-. +.+|.++++.+.....|.+++.||++|+..-|.+++..++++..+
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~ 82 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCEL 82 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccch
Confidence 4799999999943 457788888887778899999999999988888876555443322
Q ss_pred --------------------------cCCcEEEECCCchhhh
Q 025598 104 --------------------------YRDRITILRGNHESRQ 119 (250)
Q Consensus 104 --------------------------~p~~v~~l~GNHE~~~ 119 (250)
..-.++.|-||||...
T Consensus 83 ~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 83 EFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1226999999999864
No 69
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=98.13 E-value=9.5e-06 Score=68.49 Aligned_cols=69 Identities=16% Similarity=0.147 Sum_probs=45.7
Q ss_pred CCEEEEeCCC-CCHHH----------------HHHHHHhcCCCCCCeEEEeccccCCCCC---hHHHHHHHHHhhhhcCC
Q 025598 47 CPVTVCGDIH-GQFHD----------------LVELFRIGGNAPDTNYLFMGDYVDRGYY---SVETVTLLVALKVRYRD 106 (250)
Q Consensus 47 ~~i~vigDIH-G~~~~----------------l~~ll~~~~~~~~~~~vflGD~vdrG~~---~~evl~~l~~l~~~~p~ 106 (250)
.+..+|+|+| |--.. |.++.+.+...+.+.+|++||+.+.... ..++.+++..+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 5799999999 43222 2333344455667999999999975544 22333444443 23
Q ss_pred cEEEECCCchhhh
Q 025598 107 RITILRGNHESRQ 119 (250)
Q Consensus 107 ~v~~l~GNHE~~~ 119 (250)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999764
No 70
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.13 E-value=6e-06 Score=69.97 Aligned_cols=66 Identities=21% Similarity=0.225 Sum_probs=41.7
Q ss_pred EEEEeCCCCCH--------------HHHHHHHHhcCC--CCCCeEEEeccccCCCCCh--HHHHHHHHHhhhhcCCcEEE
Q 025598 49 VTVCGDIHGQF--------------HDLVELFRIGGN--APDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYRDRITI 110 (250)
Q Consensus 49 i~vigDIHG~~--------------~~l~~ll~~~~~--~~~~~~vflGD~vdrG~~~--~evl~~l~~l~~~~p~~v~~ 110 (250)
+++++|||-.. +.+.++.+.... ++.|.+|+.||++++++.. .+.+.++.++ |..+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~ 76 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVL 76 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEE
Confidence 57899999651 222233332222 3789999999999876532 2334444433 335899
Q ss_pred ECCCchhh
Q 025598 111 LRGNHESR 118 (250)
Q Consensus 111 l~GNHE~~ 118 (250)
|+||||..
T Consensus 77 V~GNHD~~ 84 (232)
T cd07393 77 LKGNHDYW 84 (232)
T ss_pred EeCCcccc
Confidence 99999973
No 71
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.12 E-value=5.9e-06 Score=71.26 Aligned_cols=70 Identities=16% Similarity=0.191 Sum_probs=45.9
Q ss_pred EEEEeCCCCCHHHHHHHHHhc---CCCCCCeEEEeccccCCCCCh-HHH----------HHHHHHh--hhhcCCcEEEEC
Q 025598 49 VTVCGDIHGQFHDLVELFRIG---GNAPDTNYLFMGDYVDRGYYS-VET----------VTLLVAL--KVRYRDRITILR 112 (250)
Q Consensus 49 i~vigDIHG~~~~l~~ll~~~---~~~~~~~~vflGD~vdrG~~~-~ev----------l~~l~~l--~~~~p~~v~~l~ 112 (250)
|+|+||+||+++.+.+.++.. ...+.|.+|++||+...+..+ .+. .++..-+ ....|-.+++|.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 589999999999987755432 235679999999997554432 221 2221111 122455689999
Q ss_pred CCchhh
Q 025598 113 GNHESR 118 (250)
Q Consensus 113 GNHE~~ 118 (250)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 72
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=98.08 E-value=1.4e-05 Score=69.05 Aligned_cols=73 Identities=19% Similarity=0.226 Sum_probs=52.5
Q ss_pred CCEEEEeCCCCC------HHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhh--hcCCcEEEECCCchhh
Q 025598 47 CPVTVCGDIHGQ------FHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKV--RYRDRITILRGNHESR 118 (250)
Q Consensus 47 ~~i~vigDIHG~------~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~--~~p~~v~~l~GNHE~~ 118 (250)
++++.|+|+|-. .+.+.++++.+...+.|.+|+.||+.+.|. .+-++.+.++.. ..+..+++++||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 479999999987 345667777777777799999999999964 222222222222 3456799999999988
Q ss_pred hhh
Q 025598 119 QIT 121 (250)
Q Consensus 119 ~~~ 121 (250)
...
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 654
No 73
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=98.07 E-value=3.8e-05 Score=64.00 Aligned_cols=73 Identities=16% Similarity=0.222 Sum_probs=46.2
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHH--------------------------HHHHH
Q 025598 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETV--------------------------TLLVA 99 (250)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl--------------------------~~l~~ 99 (250)
..+|.+|||.||.++.+.++.+.+.....|.++|+||++-....+.+-. .++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 3479999999999999999999888888999999999986655444333 33333
Q ss_pred hhhhcCCcEEEECCCchhhh
Q 025598 100 LKVRYRDRITILRGNHESRQ 119 (250)
Q Consensus 100 l~~~~p~~v~~l~GNHE~~~ 119 (250)
|. ..+-.+++|+||||...
T Consensus 85 L~-~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 85 LG-ELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HH-CC-SEEEEE--TTS-SH
T ss_pred HH-hcCCcEEEecCCCCchH
Confidence 32 33447999999999864
No 74
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.06 E-value=6.5e-06 Score=65.55 Aligned_cols=51 Identities=20% Similarity=0.150 Sum_probs=32.5
Q ss_pred cCCCCCCeEEEeccccCCCCCh-HH-HHHHHHHhhhh---c-CCcEEEECCCchhhh
Q 025598 69 GGNAPDTNYLFMGDYVDRGYYS-VE-TVTLLVALKVR---Y-RDRITILRGNHESRQ 119 (250)
Q Consensus 69 ~~~~~~~~~vflGD~vdrG~~~-~e-vl~~l~~l~~~---~-p~~v~~l~GNHE~~~ 119 (250)
+...+.+.+|++||+++.+... .+ ....+.++... . +..+++++||||...
T Consensus 34 i~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 34 LWLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred HHhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 3445689999999999987532 22 22233333222 1 236999999999854
No 75
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=98.03 E-value=1.1e-05 Score=73.89 Aligned_cols=71 Identities=21% Similarity=0.209 Sum_probs=48.7
Q ss_pred CCEEEEeCCCCCH--------HH----HHHHHHhcCCCCCCeEEEeccccCCCCChHHH----HHHHHHhhhhcCCcEEE
Q 025598 47 CPVTVCGDIHGQF--------HD----LVELFRIGGNAPDTNYLFMGDYVDRGYYSVET----VTLLVALKVRYRDRITI 110 (250)
Q Consensus 47 ~~i~vigDIHG~~--------~~----l~~ll~~~~~~~~~~~vflGD~vdrG~~~~ev----l~~l~~l~~~~p~~v~~ 110 (250)
||++.+||+|-.. .+ +..+++.+.....|.+|+.||++|++..+... ..++..++.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 5899999999421 11 34455656667789999999999997654432 2344445432 236999
Q ss_pred ECCCchhh
Q 025598 111 LRGNHESR 118 (250)
Q Consensus 111 l~GNHE~~ 118 (250)
+.||||..
T Consensus 80 I~GNHD~~ 87 (407)
T PRK10966 80 LAGNHDSV 87 (407)
T ss_pred EcCCCCCh
Confidence 99999975
No 76
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.88 E-value=0.00019 Score=56.79 Aligned_cols=119 Identities=16% Similarity=0.144 Sum_probs=80.1
Q ss_pred EEEeCCCCCHHHHHHHHHhc--CCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcCh
Q 025598 50 TVCGDIHGQFHDLVELFRIG--GNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFY 127 (250)
Q Consensus 50 ~vigDIHG~~~~l~~ll~~~--~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~ 127 (250)
+|+||+||+++.+.+-++.+ +..+-|.++++||+..-.....+.-.+.. =....|-.++++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~-g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKD-GSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhc-CCccCCCCEEEECCCCC-----------
Confidence 48999999999988777553 23456899999999976665544333333 33455768999999997
Q ss_pred HHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEecCCCCCCCCHHHHHhccccccCCCCCccccccccCCCCCCCCC
Q 025598 128 DECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWG 207 (250)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHaGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~p~~~~~~~ 207 (250)
.-+++++|.-+..-.. . .+ +. .
T Consensus 69 -----------------------------~~DILlTh~wP~gi~~-~------------------~~-~~--------~- 90 (150)
T cd07380 69 -----------------------------GVDILLTSEWPKGISK-L------------------SK-VP--------F- 90 (150)
T ss_pred -----------------------------CCCEEECCCCchhhhh-h------------------CC-Cc--------c-
Confidence 3478888876522100 0 00 00 0
Q ss_pred CCCCCCccccCHHHHHHHHHHcCCcEEEEcccCC
Q 025598 208 ISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLV 241 (250)
Q Consensus 208 ~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~ 241 (250)
...+...|...++++++...-++.+.||...
T Consensus 91 ---~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 91 ---EETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ---cccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 0112346788999999999999999999753
No 77
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=97.87 E-value=1.5e-05 Score=61.39 Aligned_cols=125 Identities=47% Similarity=0.775 Sum_probs=92.1
Q ss_pred hhcChHHHHHHhCChhHHHH---HHHHhhccCcEEEEcC-cEEEEecCCCCCC-CCHHHHHhccccc--cCCCCCccccc
Q 025598 123 VYGFYDECLRKYGNANVWKH---FTDLFDYLPLTALIES-QVFCLHGGLSPSL-DTLDNIRALDRIQ--EVPHEGPMCDL 195 (250)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~---~~~~l~~lp~~~~~~~-~~l~vHaGi~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~ 195 (250)
.+++..++...++....|.. ..++++.+|+.....+ .++|.|+++++.. .....++...+.. ..+..+...+.
T Consensus 6 ~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~~~ 85 (155)
T COG0639 6 LYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHTHDL 85 (155)
T ss_pred hhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCccccccc
Confidence 34444554445543323444 8999999999877766 7888888888865 6677777777766 66777777777
Q ss_pred cccCCCC--CCCCCCCCCCCccccCHHHHHHHHHHcCCcEEEEcccCCccCcccc
Q 025598 196 LWSDPDD--RCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWC 248 (250)
Q Consensus 196 lW~~p~~--~~~~~~~~~g~~~~~g~~~~~~~l~~~~~~~ivrgH~~~~~G~~~~ 248 (250)
+|+++.. ...|..+++|....+ ++....|......+.+.++|.....++...
T Consensus 86 ~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~ 139 (155)
T COG0639 86 LWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAV 139 (155)
T ss_pred cCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEE
Confidence 9998774 678888888887666 677788887777777999999988877643
No 78
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.85 E-value=3.4e-05 Score=67.36 Aligned_cols=73 Identities=21% Similarity=0.185 Sum_probs=54.1
Q ss_pred CCCEEEEeCCCCCHHH--HHHHHHhcCCCCCCeEEEeccccCC--CCChHHHHHHHHHhhhhcCCcEEEECCCchhhhh
Q 025598 46 KCPVTVCGDIHGQFHD--LVELFRIGGNAPDTNYLFMGDYVDR--GYYSVETVTLLVALKVRYRDRITILRGNHESRQI 120 (250)
Q Consensus 46 ~~~i~vigDIHG~~~~--l~~ll~~~~~~~~~~~vflGD~vdr--G~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~ 120 (250)
.-+|+.++|+|-+... ..+.+..+....+|.+++.||++++ -+....+...+..|+..+ .++++.||||...-
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~--gv~av~GNHd~~~~ 120 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPL--GVFAVLGNHDYGVD 120 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccC--CEEEEecccccccc
Confidence 3469999999987644 3344444444445999999999995 455666888888887644 69999999987653
No 79
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.82 E-value=5.6e-05 Score=64.43 Aligned_cols=68 Identities=21% Similarity=0.268 Sum_probs=41.1
Q ss_pred EEEeCCC--CCH---HHHHHHHHhcCCC-----CCCeEEEeccccCCCCC------------h----HHHHHHHHHhhhh
Q 025598 50 TVCGDIH--GQF---HDLVELFRIGGNA-----PDTNYLFMGDYVDRGYY------------S----VETVTLLVALKVR 103 (250)
Q Consensus 50 ~vigDIH--G~~---~~l~~ll~~~~~~-----~~~~~vflGD~vdrG~~------------~----~evl~~l~~l~~~ 103 (250)
++|||+| +.. ..+..+++.+... ..+.+|++||++|.... . ..+.+++.++..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~- 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS- 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc-
Confidence 6899999 331 2334444443222 34899999999997310 0 123444444432
Q ss_pred cCCcEEEECCCchhhh
Q 025598 104 YRDRITILRGNHESRQ 119 (250)
Q Consensus 104 ~p~~v~~l~GNHE~~~ 119 (250)
.-.++++.||||...
T Consensus 81 -~~~v~~ipGNHD~~~ 95 (243)
T cd07386 81 -HIKIIIIPGNHDAVR 95 (243)
T ss_pred -CCeEEEeCCCCCccc
Confidence 236999999999753
No 80
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.78 E-value=0.0004 Score=65.58 Aligned_cols=45 Identities=22% Similarity=0.305 Sum_probs=38.4
Q ss_pred CCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhh
Q 025598 71 NAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQI 120 (250)
Q Consensus 71 ~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~ 120 (250)
.--.|.+-++||+.||||.+-.+++.|+.. + ++=+-.||||...+
T Consensus 182 rL~VDhLHIvGDIyDRGp~pd~ImD~Lm~~----h-svDIQWGNHDIlWM 226 (640)
T PF06874_consen 182 RLAVDHLHIVGDIYDRGPRPDKIMDRLMNY----H-SVDIQWGNHDILWM 226 (640)
T ss_pred HHhhhheeecccccCCCCChhHHHHHHhcC----C-CccccccchHHHHH
Confidence 345789999999999999999999999977 3 67788999997643
No 81
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.76 E-value=8.8e-05 Score=58.16 Aligned_cols=67 Identities=19% Similarity=0.219 Sum_probs=48.1
Q ss_pred EEEEeCCCC------------CHHHHHHHH-HhcC--CCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECC
Q 025598 49 VTVCGDIHG------------QFHDLVELF-RIGG--NAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRG 113 (250)
Q Consensus 49 i~vigDIHG------------~~~~l~~ll-~~~~--~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~G 113 (250)
++++||.|= +.+....++ +... ..+.|.+++|||+.-.-.+..+..+.+.+| ++..++|+|
T Consensus 6 myfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~G 81 (186)
T COG4186 6 MYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVPG 81 (186)
T ss_pred EEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEeeC
Confidence 789999995 344454433 3221 246789999999987666666666667667 788999999
Q ss_pred Cchhhh
Q 025598 114 NHESRQ 119 (250)
Q Consensus 114 NHE~~~ 119 (250)
|||-.-
T Consensus 82 NhDk~~ 87 (186)
T COG4186 82 NHDKCH 87 (186)
T ss_pred CCCCCc
Confidence 999753
No 82
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.73 E-value=3.6e-05 Score=67.14 Aligned_cols=71 Identities=20% Similarity=0.169 Sum_probs=44.6
Q ss_pred CCCEEEEeCCCCC----HHHHHHHHHhcCCCCCCeEEEeccccCCCCCh-----HHHHHHHHHhhhhcCCcEEEECCCch
Q 025598 46 KCPVTVCGDIHGQ----FHDLVELFRIGGNAPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYRDRITILRGNHE 116 (250)
Q Consensus 46 ~~~i~vigDIHG~----~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~-----~evl~~l~~l~~~~p~~v~~l~GNHE 116 (250)
+-+++++||.|.. .+.+.++.+. ..+.+.++++||+++.+... ...+..+..+.... .++.++||||
T Consensus 4 ~~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~--P~~~~~GNHD 79 (294)
T cd00839 4 PFKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYV--PYMVTPGNHE 79 (294)
T ss_pred cEEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcC--CcEEcCcccc
Confidence 3479999999952 3333333332 35678999999999544322 22333333333334 4899999999
Q ss_pred hhhh
Q 025598 117 SRQI 120 (250)
Q Consensus 117 ~~~~ 120 (250)
....
T Consensus 80 ~~~~ 83 (294)
T cd00839 80 ADYN 83 (294)
T ss_pred cccC
Confidence 8643
No 83
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.71 E-value=0.00011 Score=67.01 Aligned_cols=73 Identities=22% Similarity=0.266 Sum_probs=53.8
Q ss_pred CCEEEEeCCCCC-------------HHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcC---CcEEE
Q 025598 47 CPVTVCGDIHGQ-------------FHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYR---DRITI 110 (250)
Q Consensus 47 ~~i~vigDIHG~-------------~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p---~~v~~ 110 (250)
||++.++|.|=- +.+|..+++.+.....|.+|+.||++|++.-|.+++..+.+...... -.+++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 689999999965 34556677777777789999999999998777666555444322211 25999
Q ss_pred ECCCchhhh
Q 025598 111 LRGNHESRQ 119 (250)
Q Consensus 111 l~GNHE~~~ 119 (250)
|.||||..-
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999864
No 84
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.62 E-value=0.0035 Score=54.01 Aligned_cols=25 Identities=0% Similarity=-0.059 Sum_probs=22.3
Q ss_pred ccCHHHHHHHHHHcCCcEEEEcccC
Q 025598 216 TFGQDIASQFNHTNGLTLISRAHQL 240 (250)
Q Consensus 216 ~~g~~~~~~~l~~~~~~~ivrgH~~ 240 (250)
+-..+....++++.+..+|+.||+.
T Consensus 202 ~l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 202 LLEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred ecCHHHHHHHHHhhCCcEEEecCCC
Confidence 3578999999999999999999984
No 85
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.58 E-value=0.00015 Score=59.65 Aligned_cols=50 Identities=18% Similarity=0.304 Sum_probs=37.6
Q ss_pred CCCCCCeEEEeccccCCCCCh--HHHHHHHHHhhhhcC----CcEEEECCCchhhh
Q 025598 70 GNAPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYR----DRITILRGNHESRQ 119 (250)
Q Consensus 70 ~~~~~~~~vflGD~vdrG~~~--~evl~~l~~l~~~~p----~~v~~l~GNHE~~~ 119 (250)
...++|.+||+||++|.|+.. .+..+.+.+++..++ ..+++|.||||...
T Consensus 39 ~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~ 94 (195)
T cd08166 39 NFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGG 94 (195)
T ss_pred hccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCC
Confidence 445689999999999999853 347777777665422 26899999999763
No 86
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=97.51 E-value=0.00024 Score=60.62 Aligned_cols=66 Identities=27% Similarity=0.345 Sum_probs=45.7
Q ss_pred CEEEEeCCCCCH---------HHHHHHHHhcCCCCCC-eEEEeccccCCCCChH-----HHHHHHHHhhhhcCCcEEEEC
Q 025598 48 PVTVCGDIHGQF---------HDLVELFRIGGNAPDT-NYLFMGDYVDRGYYSV-----ETVTLLVALKVRYRDRITILR 112 (250)
Q Consensus 48 ~i~vigDIHG~~---------~~l~~ll~~~~~~~~~-~~vflGD~vdrG~~~~-----evl~~l~~l~~~~p~~v~~l~ 112 (250)
+|+.++|+||.+ ..+.++++.......+ .++..||+++.++.+. .+++.+..+ ...+ +..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d~-~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYDA-VTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCCE-Eee
Confidence 689999999876 5677777766554445 5677999999877543 456655554 2233 456
Q ss_pred CCchhh
Q 025598 113 GNHESR 118 (250)
Q Consensus 113 GNHE~~ 118 (250)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999964
No 87
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=97.45 E-value=0.00037 Score=56.30 Aligned_cols=52 Identities=21% Similarity=0.186 Sum_probs=33.9
Q ss_pred hcCCCCCCeEEEeccccCCCCCh--HH---HHHHHHHhhhhc-----CCcEEEECCCchhhh
Q 025598 68 IGGNAPDTNYLFMGDYVDRGYYS--VE---TVTLLVALKVRY-----RDRITILRGNHESRQ 119 (250)
Q Consensus 68 ~~~~~~~~~~vflGD~vdrG~~~--~e---vl~~l~~l~~~~-----p~~v~~l~GNHE~~~ 119 (250)
.+...+.+.+|++||++|.+... .+ .+..+.++.... +..+++|+||||...
T Consensus 40 ~i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 40 ALQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HHHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 34456789999999999987643 22 333333322111 236999999999875
No 88
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=97.44 E-value=0.00039 Score=58.57 Aligned_cols=104 Identities=18% Similarity=0.217 Sum_probs=63.1
Q ss_pred CCCEEEEeCCCCCHHHHH----------------HHHH-hcCCCCCCeEEEeccccCCCCC----hHHHHHHHHHhhhhc
Q 025598 46 KCPVTVCGDIHGQFHDLV----------------ELFR-IGGNAPDTNYLFMGDYVDRGYY----SVETVTLLVALKVRY 104 (250)
Q Consensus 46 ~~~i~vigDIHG~~~~l~----------------~ll~-~~~~~~~~~~vflGD~vdrG~~----~~evl~~l~~l~~~~ 104 (250)
..+..|++|+|=-++... +.+. .+...+.+.+|++||+-.-.+. ..+-+..+.++....
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 468999999997664433 2332 2345567899999999754332 233344444443322
Q ss_pred CCcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHHHhhccCcEEEEcCcEEEEecCCCCCCC
Q 025598 105 RDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLD 172 (250)
Q Consensus 105 p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~~~~~l~vHaGi~~~~~ 172 (250)
.+++++||||........++. .+.++.. . .++++++||--.+...
T Consensus 99 --evi~i~GNHD~~i~~~~~~~~-------------------v~v~~~~-~-i~~~~~~HGh~~~~~~ 143 (235)
T COG1407 99 --EVIIIRGNHDNGIEEILPGFN-------------------VEVVDEL-E-IGGLLFRHGHKEPEPE 143 (235)
T ss_pred --cEEEEeccCCCccccccccCC-------------------ceeeeeE-E-ecCEEEEeCCCCCccc
Confidence 599999999987644333220 1122222 2 3789999998766543
No 89
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=97.19 E-value=0.0007 Score=58.77 Aligned_cols=66 Identities=20% Similarity=0.278 Sum_probs=43.0
Q ss_pred CEEEEeCCCCCH----------------HHHHHHHHhcCCCCCCeEEE-eccccCCCCC-----------hHHHHHHHHH
Q 025598 48 PVTVCGDIHGQF----------------HDLVELFRIGGNAPDTNYLF-MGDYVDRGYY-----------SVETVTLLVA 99 (250)
Q Consensus 48 ~i~vigDIHG~~----------------~~l~~ll~~~~~~~~~~~vf-lGD~vdrG~~-----------~~evl~~l~~ 99 (250)
+|+.++|+||++ ..+..+++.......+.+++ .||+++..+. ...+++.+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 588999999986 34666776665444555555 8999986542 1235666655
Q ss_pred hhhhcCCcEEEECCCchhh
Q 025598 100 LKVRYRDRITILRGNHESR 118 (250)
Q Consensus 100 l~~~~p~~v~~l~GNHE~~ 118 (250)
+. . . ++..||||..
T Consensus 82 ~g---~-d-~~~lGNHe~d 95 (277)
T cd07410 82 LG---Y-D-AGTLGNHEFN 95 (277)
T ss_pred cC---C-C-EEeecccCcc
Confidence 52 1 3 4556999953
No 90
>PLN02533 probable purple acid phosphatase
Probab=97.18 E-value=0.0006 Score=62.97 Aligned_cols=71 Identities=17% Similarity=0.188 Sum_probs=44.6
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCChH---HHHHHHHHhhhhcCCcEEEECCCchhhh
Q 025598 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSV---ETVTLLVALKVRYRDRITILRGNHESRQ 119 (250)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~---evl~~l~~l~~~~p~~v~~l~GNHE~~~ 119 (250)
+-+++++||++-. ......++.+.....|.++++||++..+.... +..+++..+....| ++.++||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 4579999999632 22233444444556789999999997543321 12333333333344 899999999863
No 91
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=97.08 E-value=0.0016 Score=53.50 Aligned_cols=67 Identities=15% Similarity=0.154 Sum_probs=43.8
Q ss_pred eCCCCCHHHHHHHHHhc-CCCCCCeEEEeccccCCCCCh-HHHHHHHHHhhhhc---------------------CCcEE
Q 025598 53 GDIHGQFHDLVELFRIG-GNAPDTNYLFMGDYVDRGYYS-VETVTLLVALKVRY---------------------RDRIT 109 (250)
Q Consensus 53 gDIHG~~~~l~~ll~~~-~~~~~~~~vflGD~vdrG~~~-~evl~~l~~l~~~~---------------------p~~v~ 109 (250)
=|++|+=.=|.+.++.+ ....++.++||||++|.|--+ .|-.+...+....+ ...++
T Consensus 23 ld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 23 LDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred ehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 35567666666666543 345679999999999987533 33444455544432 12568
Q ss_pred EECCCchhhh
Q 025598 110 ILRGNHESRQ 119 (250)
Q Consensus 110 ~l~GNHE~~~ 119 (250)
.|+||||.-.
T Consensus 103 ~V~GNHDIG~ 112 (193)
T cd08164 103 NIAGNHDVGY 112 (193)
T ss_pred EECCcccCCC
Confidence 9999999854
No 92
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=97.07 E-value=0.0012 Score=47.99 Aligned_cols=44 Identities=16% Similarity=0.097 Sum_probs=35.2
Q ss_pred CChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc
Q 025598 2 PSQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPV 45 (250)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~ 45 (250)
+|.+.++.++|.|++++.|+...+..++.++.++|+++|+++++
T Consensus 52 it~efv~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 52 ITLEFVKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp --HHHHHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 47889999999999999999999999999999999999999864
No 93
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=96.96 E-value=0.0016 Score=52.45 Aligned_cols=69 Identities=20% Similarity=0.256 Sum_probs=47.9
Q ss_pred CCEEEEeCCCCCH-----------------HHHHHHHHhcCCCCCCeEEEecccc--CCCCChHHHHHHHHHhhhhcCCc
Q 025598 47 CPVTVCGDIHGQF-----------------HDLVELFRIGGNAPDTNYLFMGDYV--DRGYYSVETVTLLVALKVRYRDR 107 (250)
Q Consensus 47 ~~i~vigDIHG~~-----------------~~l~~ll~~~~~~~~~~~vflGD~v--drG~~~~evl~~l~~l~~~~p~~ 107 (250)
|++++|+|+|=.+ ++..+-... .-.+.|.++.-||+- -|=++..+=+.++-.| |+.
T Consensus 1 M~iyaiaDLHLa~~~pKpM~vFGe~W~gh~ekI~k~W~~-~v~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~ 75 (230)
T COG1768 1 MRIYAIADLHLALGVPKPMEVFGEPWSGHHEKIKKHWRS-KVSPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGT 75 (230)
T ss_pred CceeeeehhhHhhCCCCceeecCCcccCchHHHHHHHHh-cCChhhEEEecccchhheechhhhhhhhhhhcC----CCc
Confidence 5788888888432 222221111 124567788899985 5566677778888888 888
Q ss_pred EEEECCCchhhhh
Q 025598 108 ITILRGNHESRQI 120 (250)
Q Consensus 108 v~~l~GNHE~~~~ 120 (250)
-+++|||||.+.-
T Consensus 76 K~m~rGNHDYWw~ 88 (230)
T COG1768 76 KYMIRGNHDYWWS 88 (230)
T ss_pred EEEEecCCccccc
Confidence 9999999999753
No 94
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=96.76 E-value=0.0031 Score=54.15 Aligned_cols=66 Identities=20% Similarity=0.218 Sum_probs=43.2
Q ss_pred CEEEEeCCCCCH----------HHHHHHHHhcCCCCCCeEEEeccccCCCCCh-----HHHHHHHHHhhhhcCCcEEEEC
Q 025598 48 PVTVCGDIHGQF----------HDLVELFRIGGNAPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYRDRITILR 112 (250)
Q Consensus 48 ~i~vigDIHG~~----------~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~-----~evl~~l~~l~~~~p~~v~~l~ 112 (250)
+++.++|+||++ ..+..+++.....+++.++..||+++..+.+ ..+++.+..+ ...+ ...
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-Ecc
Confidence 688999999974 4566677665443556677799999865532 3445555444 2244 456
Q ss_pred CCchhh
Q 025598 113 GNHESR 118 (250)
Q Consensus 113 GNHE~~ 118 (250)
||||.-
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999953
No 95
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=96.70 E-value=0.0043 Score=53.60 Aligned_cols=69 Identities=20% Similarity=0.220 Sum_probs=41.5
Q ss_pred CEEEEeCCCCC--H--HHHHHH-HHhcCCCCCCeEEEecccc-CCCCChH------HHHHHHHH-hhhhcCCcEEEECCC
Q 025598 48 PVTVCGDIHGQ--F--HDLVEL-FRIGGNAPDTNYLFMGDYV-DRGYYSV------ETVTLLVA-LKVRYRDRITILRGN 114 (250)
Q Consensus 48 ~i~vigDIHG~--~--~~l~~l-l~~~~~~~~~~~vflGD~v-drG~~~~------evl~~l~~-l~~~~p~~v~~l~GN 114 (250)
+++++||.=.. . ..+.+. .+.+...+.+.+|++||++ +-|..+. +.+..++. +. ....++.++||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~--~~~P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPS--LQVPWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchh--hcCCeEEecCC
Confidence 68899998653 1 233333 3344445678999999987 5554221 22222222 21 12359999999
Q ss_pred chhh
Q 025598 115 HESR 118 (250)
Q Consensus 115 HE~~ 118 (250)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9976
No 96
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=96.40 E-value=0.0064 Score=53.97 Aligned_cols=74 Identities=20% Similarity=0.294 Sum_probs=49.8
Q ss_pred CCEEEEeCCCCCHHHHHHHH---HhcCCCCCCeEEEeccccC-CCC---ChHHH---H----HHHHH--hhhhcCCcEEE
Q 025598 47 CPVTVCGDIHGQFHDLVELF---RIGGNAPDTNYLFMGDYVD-RGY---YSVET---V----TLLVA--LKVRYRDRITI 110 (250)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll---~~~~~~~~~~~vflGD~vd-rG~---~~~ev---l----~~l~~--l~~~~p~~v~~ 110 (250)
|||.|=|--||.++.+-+-+ ++.+..+.|.++++||+=. |.. +++.| + ++..- =...+|--.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 68999999999999998544 5566778899999999842 221 12211 1 11111 12346666789
Q ss_pred ECCCchhhhh
Q 025598 111 LRGNHESRQI 120 (250)
Q Consensus 111 l~GNHE~~~~ 120 (250)
|-||||.+..
T Consensus 81 IGGNHEAsny 90 (456)
T KOG2863|consen 81 IGGNHEASNY 90 (456)
T ss_pred ecCchHHHHH
Confidence 9999999753
No 97
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=96.36 E-value=0.0076 Score=52.72 Aligned_cols=66 Identities=21% Similarity=0.304 Sum_probs=43.1
Q ss_pred CEEEEeCCCCCHH--------------HHHHHHHhcCCCC-CCeEEEeccccCCCCC-h-----HHHHHHHHHhhhhcCC
Q 025598 48 PVTVCGDIHGQFH--------------DLVELFRIGGNAP-DTNYLFMGDYVDRGYY-S-----VETVTLLVALKVRYRD 106 (250)
Q Consensus 48 ~i~vigDIHG~~~--------------~l~~ll~~~~~~~-~~~~vflGD~vdrG~~-~-----~evl~~l~~l~~~~p~ 106 (250)
+|+.++|+||++. .+..+++...... ...++..||++...+. + ..+++.+.++. -
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g----~ 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMG----V 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhC----C
Confidence 5889999999754 3666676654333 3456779999976653 2 24566666662 2
Q ss_pred cEEEECCCchhh
Q 025598 107 RITILRGNHESR 118 (250)
Q Consensus 107 ~v~~l~GNHE~~ 118 (250)
.+ +..||||.-
T Consensus 78 Da-~t~GNHefd 88 (288)
T cd07412 78 DA-SAVGNHEFD 88 (288)
T ss_pred ee-eeecccccc
Confidence 34 556999954
No 98
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=96.17 E-value=0.0092 Score=51.44 Aligned_cols=65 Identities=22% Similarity=0.174 Sum_probs=40.2
Q ss_pred CEEEEeCCCCCH----------------------HHHHHHHHhcCCC-CCCeE-EEeccccCCCCCh-----HHHHHHHH
Q 025598 48 PVTVCGDIHGQF----------------------HDLVELFRIGGNA-PDTNY-LFMGDYVDRGYYS-----VETVTLLV 98 (250)
Q Consensus 48 ~i~vigDIHG~~----------------------~~l~~ll~~~~~~-~~~~~-vflGD~vdrG~~~-----~evl~~l~ 98 (250)
.++.++|+||++ ..+..+++..... ..+.+ +..||+++..+.+ ..+++.+.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 467889999974 3345566655444 45555 4599999876543 34555555
Q ss_pred HhhhhcCCcEEEECCCchhh
Q 025598 99 ALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 99 ~l~~~~p~~v~~l~GNHE~~ 118 (250)
.+ +-.+. . ||||..
T Consensus 82 ~~----g~da~-~-GNHefd 95 (264)
T cd07411 82 AL----GVDAM-V-GHWEFT 95 (264)
T ss_pred hh----CCeEE-e-cccccc
Confidence 54 32333 3 999954
No 99
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=96.05 E-value=0.018 Score=50.89 Aligned_cols=71 Identities=20% Similarity=0.263 Sum_probs=44.2
Q ss_pred CEEEEeCCCCCHH-----------------HHH--HHH-HhcCCCCCCeEEEeccccCCCCChHH---HHHHHHHhhhhc
Q 025598 48 PVTVCGDIHGQFH-----------------DLV--ELF-RIGGNAPDTNYLFMGDYVDRGYYSVE---TVTLLVALKVRY 104 (250)
Q Consensus 48 ~i~vigDIHG~~~-----------------~l~--~ll-~~~~~~~~~~~vflGD~vdrG~~~~e---vl~~l~~l~~~~ 104 (250)
+|+.++|+|=... ++. ..+ +.+...++|.+||+||.|+. ..... ++....+-.+.+
T Consensus 55 KIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~ 133 (379)
T KOG1432|consen 55 KILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDR 133 (379)
T ss_pred EEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhc
Confidence 6999999995443 121 122 23345668999999999985 43333 333333333333
Q ss_pred CCcEEEECCCchhhh
Q 025598 105 RDRITILRGNHESRQ 119 (250)
Q Consensus 105 p~~v~~l~GNHE~~~ 119 (250)
.-....+.||||...
T Consensus 134 ~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 134 KIPWAAVLGNHDDES 148 (379)
T ss_pred CCCeEEEeccccccc
Confidence 335789999999864
No 100
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=95.98 E-value=0.02 Score=49.86 Aligned_cols=66 Identities=18% Similarity=0.191 Sum_probs=41.0
Q ss_pred CEEEEeCCCCCH---------------------HHHHHHHHhcCCCCCCeE-EEeccccCCCCC-----hHHHHHHHHHh
Q 025598 48 PVTVCGDIHGQF---------------------HDLVELFRIGGNAPDTNY-LFMGDYVDRGYY-----SVETVTLLVAL 100 (250)
Q Consensus 48 ~i~vigDIHG~~---------------------~~l~~ll~~~~~~~~~~~-vflGD~vdrG~~-----~~evl~~l~~l 100 (250)
+|+.++|+||++ ..+..+++.......+.+ +-.||++...+. ...+++.+..+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 578899999864 445566665544344444 449999987653 34455555554
Q ss_pred hhhcCCcEEEECCCchhh
Q 025598 101 KVRYRDRITILRGNHESR 118 (250)
Q Consensus 101 ~~~~p~~v~~l~GNHE~~ 118 (250)
. -.+.. .||||.-
T Consensus 82 g----~D~~~-lGNHefd 94 (281)
T cd07409 82 G----YDAMT-LGNHEFD 94 (281)
T ss_pred C----CCEEE-ecccccc
Confidence 2 24444 5999964
No 101
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=95.95 E-value=0.016 Score=50.65 Aligned_cols=71 Identities=21% Similarity=0.208 Sum_probs=44.0
Q ss_pred EEEEeCCCCC---HHHHHHHHHhcCCC--CCCeEEEeccccCCCCChH--H------HHHHHHHhhhhcCC-cEEEECCC
Q 025598 49 VTVCGDIHGQ---FHDLVELFRIGGNA--PDTNYLFMGDYVDRGYYSV--E------TVTLLVALKVRYRD-RITILRGN 114 (250)
Q Consensus 49 i~vigDIHG~---~~~l~~ll~~~~~~--~~~~~vflGD~vdrG~~~~--e------vl~~l~~l~~~~p~-~v~~l~GN 114 (250)
.--.|+-. | ...++.+++.+... +.+.+|+.||+++.+.... + .-.+...++..+|. .++.+.||
T Consensus 40 ~~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 40 AGPWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 33455554 4 34566677665544 7899999999998775421 1 12223334434443 69999999
Q ss_pred chhhhh
Q 025598 115 HESRQI 120 (250)
Q Consensus 115 HE~~~~ 120 (250)
||..-.
T Consensus 119 HD~~p~ 124 (296)
T cd00842 119 HDSYPV 124 (296)
T ss_pred CCCCcc
Confidence 998643
No 102
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=95.71 E-value=0.023 Score=48.76 Aligned_cols=65 Identities=23% Similarity=0.204 Sum_probs=43.7
Q ss_pred CEEEEeCCC----------CCHHHHHHHHHhcCCCCCC-eEEEeccccCCCCC-----hHHHHHHHHHhhhhcCCcEEEE
Q 025598 48 PVTVCGDIH----------GQFHDLVELFRIGGNAPDT-NYLFMGDYVDRGYY-----SVETVTLLVALKVRYRDRITIL 111 (250)
Q Consensus 48 ~i~vigDIH----------G~~~~l~~ll~~~~~~~~~-~~vflGD~vdrG~~-----~~evl~~l~~l~~~~p~~v~~l 111 (250)
+++-+.|+| |.+..+..+++.......+ .++..||+++.++. ...+++.+..+. --+..
T Consensus 2 ~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~ 76 (257)
T cd07406 2 TILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLAC 76 (257)
T ss_pred eEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEe
Confidence 466777888 3467777888766544445 56669999987652 345666666662 23567
Q ss_pred CCCchh
Q 025598 112 RGNHES 117 (250)
Q Consensus 112 ~GNHE~ 117 (250)
.||||.
T Consensus 77 ~GNHef 82 (257)
T cd07406 77 FGNHEF 82 (257)
T ss_pred eccccc
Confidence 899996
No 103
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=95.69 E-value=0.019 Score=52.27 Aligned_cols=73 Identities=19% Similarity=0.300 Sum_probs=50.9
Q ss_pred CCEEEEeCCC--CCH---------HH------HHHHHHh-cCCCCCCeEEEeccccCCCC--ChHHHHHHHHHhhhhcCC
Q 025598 47 CPVTVCGDIH--GQF---------HD------LVELFRI-GGNAPDTNYLFMGDYVDRGY--YSVETVTLLVALKVRYRD 106 (250)
Q Consensus 47 ~~i~vigDIH--G~~---------~~------l~~ll~~-~~~~~~~~~vflGD~vdrG~--~~~evl~~l~~l~~~~p~ 106 (250)
-++..|+|-| |++ +. |.+.++. ....++|.++||||++|-|. ...|--+...+++..++.
T Consensus 49 ~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~ 128 (410)
T KOG3662|consen 49 TKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGR 128 (410)
T ss_pred eEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCC
Confidence 4799999977 311 11 2233322 23456799999999999876 556677777777777665
Q ss_pred ----cEEEECCCchhhh
Q 025598 107 ----RITILRGNHESRQ 119 (250)
Q Consensus 107 ----~v~~l~GNHE~~~ 119 (250)
+++.+.||||--.
T Consensus 129 k~~~~~~~i~GNhDIGf 145 (410)
T KOG3662|consen 129 KGNIKVIYIAGNHDIGF 145 (410)
T ss_pred CCCCeeEEeCCcccccc
Confidence 6889999999753
No 104
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.60 E-value=0.14 Score=40.14 Aligned_cols=62 Identities=27% Similarity=0.337 Sum_probs=44.0
Q ss_pred CEEEEeCCCC--CHHHHHHHHHhcCC-CCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhh
Q 025598 48 PVTVCGDIHG--QFHDLVELFRIGGN-APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 48 ~i~vigDIHG--~~~~l~~ll~~~~~-~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
-+.++||+|= ...+|-.-++++-- .+-..++++|++. +.+.+++|..+ .++++++||--|..
T Consensus 2 LvL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l----~~dvhiVrGeFD~~ 66 (183)
T KOG3325|consen 2 LVLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTL----SSDVHIVRGEFDEN 66 (183)
T ss_pred EEEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhh----CCCcEEEecccCcc
Confidence 3689999996 33444444443322 3347899999975 46899999988 45899999987764
No 105
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=95.33 E-value=0.0088 Score=54.96 Aligned_cols=109 Identities=13% Similarity=0.028 Sum_probs=89.9
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccC----CCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHH
Q 025598 19 PLPEQEVNILCEQARAILVEEWNVQPVK----CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETV 94 (250)
Q Consensus 19 ~l~~~~~~~l~~~~~~~l~~~~~~~~~~----~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl 94 (250)
.+....+..+++.+.+.+.-+|+..... .-.+.++|.||...++..+++.- ......+++-|++++++....+.+
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d-P~~~K~Y~rrg~a~m~l~~~~~A~ 92 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD-PTYIKAYVRRGTAVMALGEFKKAL 92 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC-chhhheeeeccHHHHhHHHHHHHH
Confidence 4777889999999999999999865542 34899999999999998888753 222346999999999999999999
Q ss_pred HHHHHhhhhcCCcEEEECCCchhhhhhhhhcChH
Q 025598 95 TLLVALKVRYRDRITILRGNHESRQITQVYGFYD 128 (250)
Q Consensus 95 ~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~ 128 (250)
..+...+...|+...+.|++||.-.+-..++|..
T Consensus 93 ~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ 126 (476)
T KOG0376|consen 93 LDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEK 126 (476)
T ss_pred HHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999987765555544
No 106
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=95.20 E-value=0.029 Score=58.25 Aligned_cols=67 Identities=19% Similarity=0.260 Sum_probs=45.3
Q ss_pred CCEEEEeCCCCCH---HHHHHHHHhcCCCCCCeEEE-eccccCCCCCh-----HHHHHHHHHhhhhcCCcEEEECCCchh
Q 025598 47 CPVTVCGDIHGQF---HDLVELFRIGGNAPDTNYLF-MGDYVDRGYYS-----VETVTLLVALKVRYRDRITILRGNHES 117 (250)
Q Consensus 47 ~~i~vigDIHG~~---~~l~~ll~~~~~~~~~~~vf-lGD~vdrG~~~-----~evl~~l~~l~~~~p~~v~~l~GNHE~ 117 (250)
.+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..+++.+..+. --....||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 4699999999874 55666666654444556655 99999876543 34566665552 23568999996
Q ss_pred h
Q 025598 118 R 118 (250)
Q Consensus 118 ~ 118 (250)
-
T Consensus 736 d 736 (1163)
T PRK09419 736 D 736 (1163)
T ss_pred c
Confidence 3
No 107
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=95.07 E-value=0.074 Score=46.02 Aligned_cols=67 Identities=13% Similarity=0.087 Sum_probs=50.8
Q ss_pred CCEEEEeCCCCC--HHHHHHHHHhcCC-CCCCeEEEeccccCCC-CChHHHHHHHHHhhhhcCCcEEEECCCchhh
Q 025598 47 CPVTVCGDIHGQ--FHDLVELFRIGGN-APDTNYLFMGDYVDRG-YYSVETVTLLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 47 ~~i~vigDIHG~--~~~l~~ll~~~~~-~~~~~~vflGD~vdrG-~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
|||.+||||=|. ...+.+.|..+.. .+.|.+|..||...-| .-+.++++.|.+. .-+++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~----GvDviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQS----GVNYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhc----CCCEEEc-cchhcc
Confidence 689999999999 4677777766543 3467888899998765 4578888888877 3356666 999974
No 108
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=94.47 E-value=0.062 Score=46.91 Aligned_cols=66 Identities=18% Similarity=0.033 Sum_probs=38.5
Q ss_pred CEEEEeCCCCCHHH----------HHHHHHhcCC-----CCCCeEEEeccccCCCCC-----hHHHHHHHHHhhhhcCCc
Q 025598 48 PVTVCGDIHGQFHD----------LVELFRIGGN-----APDTNYLFMGDYVDRGYY-----SVETVTLLVALKVRYRDR 107 (250)
Q Consensus 48 ~i~vigDIHG~~~~----------l~~ll~~~~~-----~~~~~~vflGD~vdrG~~-----~~evl~~l~~l~~~~p~~ 107 (250)
.|+.++|+||++.. +..+++.... .+...++-.||.+...+. ...+++++..+. -.
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g----~D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG----YD 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhC----Cc
Confidence 47889999997533 4455554432 233345559999843332 233455555552 23
Q ss_pred EEEECCCchhh
Q 025598 108 ITILRGNHESR 118 (250)
Q Consensus 108 v~~l~GNHE~~ 118 (250)
+. ..||||.-
T Consensus 78 a~-~~GNHEfD 87 (285)
T cd07405 78 AM-AVGNHEFD 87 (285)
T ss_pred EE-eecccccc
Confidence 44 44999964
No 109
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=94.10 E-value=0.089 Score=43.47 Aligned_cols=72 Identities=11% Similarity=0.165 Sum_probs=41.5
Q ss_pred EEEEeCCCCC-----HHHHHHHHHhcC-CCCCCeEEEeccccCCCCChH----------HHHHHHHHhhhh----cC-Cc
Q 025598 49 VTVCGDIHGQ-----FHDLVELFRIGG-NAPDTNYLFMGDYVDRGYYSV----------ETVTLLVALKVR----YR-DR 107 (250)
Q Consensus 49 i~vigDIHG~-----~~~l~~ll~~~~-~~~~~~~vflGD~vdrG~~~~----------evl~~l~~l~~~----~p-~~ 107 (250)
|+++||+|-. ++.|.++|+... ....+.+|++|++++.-.... .....+..+... .+ -+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5788888875 566777887777 667789999999999632221 111122222111 11 27
Q ss_pred EEEECCCchhhhh
Q 025598 108 ITILRGNHESRQI 120 (250)
Q Consensus 108 v~~l~GNHE~~~~ 120 (250)
+++++|++|....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998754
No 110
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=93.81 E-value=0.19 Score=43.18 Aligned_cols=66 Identities=17% Similarity=0.138 Sum_probs=47.8
Q ss_pred CEEEEeCCCCCH--HHHHHHHHhcCC-CCCCeEEEeccccCCC-CChHHHHHHHHHhhhhcCCcEEEECCCchhh
Q 025598 48 PVTVCGDIHGQF--HDLVELFRIGGN-APDTNYLFMGDYVDRG-YYSVETVTLLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 48 ~i~vigDIHG~~--~~l~~ll~~~~~-~~~~~~vflGD~vdrG-~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
|+.+||||=|.. ..+.+.|..+.. .+.|.+|..||...-| +-+.++.+.|..+ .-.+..+ |||+.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~----G~D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSA----GVDVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhc----CCCEEEe-cccccC
Confidence 689999999975 556667765543 3457777799998656 4677888888887 3356666 999753
No 111
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=93.13 E-value=0.18 Score=44.75 Aligned_cols=66 Identities=23% Similarity=0.191 Sum_probs=41.6
Q ss_pred CEEEEeCCCCCH------HHHHHHHHhcCC-----CCCCeEEEeccccCCCCC-------------hHHHHHHHHHhhhh
Q 025598 48 PVTVCGDIHGQF------HDLVELFRIGGN-----APDTNYLFMGDYVDRGYY-------------SVETVTLLVALKVR 103 (250)
Q Consensus 48 ~i~vigDIHG~~------~~l~~ll~~~~~-----~~~~~~vflGD~vdrG~~-------------~~evl~~l~~l~~~ 103 (250)
.|+-+.|+||++ ..+..+++.... .+...++..||.+.-++. ...+++++..+.
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g-- 79 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG-- 79 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC--
Confidence 478899999995 344455554322 233456669999875542 345566666663
Q ss_pred cCCcEEEECCCchhh
Q 025598 104 YRDRITILRGNHESR 118 (250)
Q Consensus 104 ~p~~v~~l~GNHE~~ 118 (250)
-=.+..||||.-
T Consensus 80 ---~Da~tlGNHEFD 91 (313)
T cd08162 80 ---VQAIALGNHEFD 91 (313)
T ss_pred ---CcEEeccccccc
Confidence 235678999953
No 112
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=92.38 E-value=0.2 Score=47.45 Aligned_cols=69 Identities=26% Similarity=0.275 Sum_probs=45.1
Q ss_pred CCCEEEEeCCCCCHH---------------HHHHHHHhcCCCCCC-eEEEeccccCCCC------ChHHHHHHHHHhhhh
Q 025598 46 KCPVTVCGDIHGQFH---------------DLVELFRIGGNAPDT-NYLFMGDYVDRGY------YSVETVTLLVALKVR 103 (250)
Q Consensus 46 ~~~i~vigDIHG~~~---------------~l~~ll~~~~~~~~~-~~vflGD~vdrG~------~~~evl~~l~~l~~~ 103 (250)
+.+|+-+.|+||++. ....+++........ .+|=.||+++..+ .....++++..+.
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~-- 103 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG-- 103 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC--
Confidence 447999999999998 333444443333334 4555999998733 3445677777773
Q ss_pred cCCcEEEECCCchhhh
Q 025598 104 YRDRITILRGNHESRQ 119 (250)
Q Consensus 104 ~p~~v~~l~GNHE~~~ 119 (250)
-=....||||.-.
T Consensus 104 ---yDa~tiGNHEFd~ 116 (517)
T COG0737 104 ---YDAMTLGNHEFDY 116 (517)
T ss_pred ---CcEEeeccccccc
Confidence 2346679999754
No 113
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=92.21 E-value=0.22 Score=45.89 Aligned_cols=74 Identities=19% Similarity=0.211 Sum_probs=42.4
Q ss_pred cCCCEEEEeCCCCCHHHHHHHHHhcCCC-CCCeEEEecccc-CCCCCh---HHHHHHHHHhhhhcCCcEEEECCCchhhh
Q 025598 45 VKCPVTVCGDIHGQFHDLVELFRIGGNA-PDTNYLFMGDYV-DRGYYS---VETVTLLVALKVRYRDRITILRGNHESRQ 119 (250)
Q Consensus 45 ~~~~i~vigDIHG~~~~l~~ll~~~~~~-~~~~~vflGD~v-drG~~~---~evl~~l~~l~~~~p~~v~~l~GNHE~~~ 119 (250)
-+.++.++||+ |+...-...+...... +.|.++++||+. +.+..+ -+-..++.-+...- ...+..||||.-.
T Consensus 146 ~~~~~~i~GDl-G~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~v--Pymv~~GNHE~d~ 222 (452)
T KOG1378|consen 146 SPTRAAIFGDM-GCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYV--PYMVCSGNHEIDW 222 (452)
T ss_pred CceeEEEEccc-cccccccchHhHHhcccCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccC--ceEEecccccccC
Confidence 34589999999 4443332333222222 578999999987 233322 12233333332222 3788999999876
Q ss_pred hh
Q 025598 120 IT 121 (250)
Q Consensus 120 ~~ 121 (250)
..
T Consensus 223 ~~ 224 (452)
T KOG1378|consen 223 PP 224 (452)
T ss_pred CC
Confidence 54
No 114
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=92.14 E-value=0.26 Score=48.03 Aligned_cols=69 Identities=16% Similarity=0.149 Sum_probs=44.5
Q ss_pred cCCCEEEEeCCCCCHH----------------HHHHHHHhcCCC-CCCeEEEeccccCCCCChH-------------HHH
Q 025598 45 VKCPVTVCGDIHGQFH----------------DLVELFRIGGNA-PDTNYLFMGDYVDRGYYSV-------------ETV 94 (250)
Q Consensus 45 ~~~~i~vigDIHG~~~----------------~l~~ll~~~~~~-~~~~~vflGD~vdrG~~~~-------------evl 94 (250)
...+|+...|+||++. .+..+++.+... ++..++-.||++...|.+- -++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 4568999999999863 344555554332 3445666999997655321 256
Q ss_pred HHHHHhhhhcCCcEEEECCCchhh
Q 025598 95 TLLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 95 ~~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
+.+..+. -=....||||.-
T Consensus 104 ~amN~lg-----yDa~tlGNHEFd 122 (649)
T PRK09420 104 KAMNTLD-----YDVGNLGNHEFN 122 (649)
T ss_pred HHHHhcC-----CcEEeccchhhh
Confidence 6666662 245778999954
No 115
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.02 E-value=0.5 Score=43.53 Aligned_cols=69 Identities=19% Similarity=0.346 Sum_probs=51.4
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCC--CCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCc
Q 025598 46 KCPVTVCGDIHGQFHDLVELFRIGGN--APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNH 115 (250)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~--~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNH 115 (250)
+.+|.|+||.-|+++.|.+-++.+.. .+-|.++++|++++-..++.+++.+....+ ..|-.++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 46999999999999988776655433 346899999999987667778877766543 3355677776655
No 116
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=91.97 E-value=0.27 Score=47.84 Aligned_cols=67 Identities=16% Similarity=0.134 Sum_probs=42.1
Q ss_pred CCEEEEeCCCCCHH----------------HHHHHHHhcCCC-CCCeEEEeccccCCCCCh-------------HHHHHH
Q 025598 47 CPVTVCGDIHGQFH----------------DLVELFRIGGNA-PDTNYLFMGDYVDRGYYS-------------VETVTL 96 (250)
Q Consensus 47 ~~i~vigDIHG~~~----------------~l~~ll~~~~~~-~~~~~vflGD~vdrG~~~-------------~evl~~ 96 (250)
-+|+-+.|+||++. .+..+++..... ++..++-.||++...|.+ .-++++
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 47899999999864 344555554332 334556699999755432 235565
Q ss_pred HHHhhhhcCCcEEEECCCchhh
Q 025598 97 LVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 97 l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
+..+. -=....||||.-
T Consensus 83 mN~lg-----yDa~tlGNHEFd 99 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEFN 99 (626)
T ss_pred HhhcC-----ccEEeccccccc
Confidence 65552 234778999953
No 117
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=91.91 E-value=0.24 Score=51.64 Aligned_cols=67 Identities=21% Similarity=0.276 Sum_probs=42.2
Q ss_pred CCEEEEeCCCCCH----------------HHHHHHHHhcCCCCCCeEEE-eccccCCCCC--------------hHHHHH
Q 025598 47 CPVTVCGDIHGQF----------------HDLVELFRIGGNAPDTNYLF-MGDYVDRGYY--------------SVETVT 95 (250)
Q Consensus 47 ~~i~vigDIHG~~----------------~~l~~ll~~~~~~~~~~~vf-lGD~vdrG~~--------------~~evl~ 95 (250)
-+|+.++|+||++ ..+..+++.+.....+.+++ .||++...|- ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 4799999999985 34445665544333445555 9999976541 224555
Q ss_pred HHHHhhhhcCCcEEEECCCchhh
Q 025598 96 LLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 96 ~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
.+..+. -=....||||.-
T Consensus 122 ~mN~lg-----yDa~~lGNHEFd 139 (1163)
T PRK09419 122 AMNALG-----YDAGTLGNHEFN 139 (1163)
T ss_pred HHhhcC-----ccEEeecccccc
Confidence 555552 234668999963
No 118
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=91.84 E-value=0.67 Score=43.04 Aligned_cols=77 Identities=19% Similarity=0.231 Sum_probs=48.0
Q ss_pred CEEEEeCCCC-C----HHHHHHHHHhcCCCC-----CCeEEEeccccCC-C-----------CChHHHHHHHHHhhhhcC
Q 025598 48 PVTVCGDIHG-Q----FHDLVELFRIGGNAP-----DTNYLFMGDYVDR-G-----------YYSVETVTLLVALKVRYR 105 (250)
Q Consensus 48 ~i~vigDIHG-~----~~~l~~ll~~~~~~~-----~~~~vflGD~vdr-G-----------~~~~evl~~l~~l~~~~p 105 (250)
.+++++|+|= . -+++...++.+.-.. ...+++.||.||- | .+..+-++.+..+..+-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 5899999996 2 234444555443221 1346779999994 2 223444566666555556
Q ss_pred C--cEEEECCCchhhhhhhhh
Q 025598 106 D--RITILRGNHESRQITQVY 124 (250)
Q Consensus 106 ~--~v~~l~GNHE~~~~~~~~ 124 (250)
. .+++.+||||..-.....
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQ 327 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQ 327 (481)
T ss_pred CCceEEEecCCCCccccccCC
Confidence 5 578899999997665443
No 119
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=91.68 E-value=0.28 Score=42.80 Aligned_cols=67 Identities=16% Similarity=0.097 Sum_probs=39.6
Q ss_pred CCEEEEeCCCCCHH-------------HHHHHHHhc----CCCCCC-eEEEeccccCCCCC-------hHHHHHHHHHhh
Q 025598 47 CPVTVCGDIHGQFH-------------DLVELFRIG----GNAPDT-NYLFMGDYVDRGYY-------SVETVTLLVALK 101 (250)
Q Consensus 47 ~~i~vigDIHG~~~-------------~l~~ll~~~----~~~~~~-~~vflGD~vdrG~~-------~~evl~~l~~l~ 101 (250)
-+|+.++|+||++. .+.++++.. .....+ .++-.||.+...+. ...+++++..+
T Consensus 6 ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~m- 84 (282)
T cd07407 6 INFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMM- 84 (282)
T ss_pred EEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhc-
Confidence 36899999999763 223333222 222233 44559999875432 23356666555
Q ss_pred hhcCCcEEEECCCchhh
Q 025598 102 VRYRDRITILRGNHESR 118 (250)
Q Consensus 102 ~~~p~~v~~l~GNHE~~ 118 (250)
+ -=....||||.-
T Consensus 85 ---g-yDa~tlGNHEFd 97 (282)
T cd07407 85 ---P-YDLLTIGNHELY 97 (282)
T ss_pred ---C-CcEEeecccccC
Confidence 2 245778999984
No 120
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=91.02 E-value=0.77 Score=43.22 Aligned_cols=56 Identities=21% Similarity=0.199 Sum_probs=43.8
Q ss_pred cCCCEEEEeCCCC------------CHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHh
Q 025598 45 VKCPVTVCGDIHG------------QFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVAL 100 (250)
Q Consensus 45 ~~~~i~vigDIHG------------~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l 100 (250)
-..||.|-.|+|= .+..|+.+|..+.....|.++.-||++.-..-|..+|-...++
T Consensus 12 ntirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~l 79 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLEL 79 (646)
T ss_pred cceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHH
Confidence 3458999999995 3567899999988889999999999997766666665544443
No 121
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=90.44 E-value=0.22 Score=45.91 Aligned_cols=41 Identities=27% Similarity=0.424 Sum_probs=35.0
Q ss_pred CCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhh
Q 025598 73 PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 73 ~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
-.|.+=++||+.||||++-.+++.|... + .+=+=.||||..
T Consensus 190 vVDhLHiVGDIyDRGP~pd~Imd~L~~y----h-svDiQWGNHDil 230 (648)
T COG3855 190 VVDHLHIVGDIYDRGPYPDKIMDTLINY----H-SVDIQWGNHDIL 230 (648)
T ss_pred hhhheeeecccccCCCCchHHHHHHhhc----c-cccccccCcceE
Confidence 4688889999999999999999999877 3 566778999974
No 122
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=90.37 E-value=0.37 Score=41.64 Aligned_cols=72 Identities=22% Similarity=0.272 Sum_probs=44.7
Q ss_pred CCCEEEEeC--CCCCHHHHHHHHHh---cCCCCCCeEEEecccc-CCCCChH------HHHHHHHHhhhhcCCcEEEECC
Q 025598 46 KCPVTVCGD--IHGQFHDLVELFRI---GGNAPDTNYLFMGDYV-DRGYYSV------ETVTLLVALKVRYRDRITILRG 113 (250)
Q Consensus 46 ~~~i~vigD--IHG~~~~l~~ll~~---~~~~~~~~~vflGD~v-drG~~~~------evl~~l~~l~~~~p~~v~~l~G 113 (250)
+-+++|||| .+|.+..-+..++. ....+.|.++-+||=+ |.|+.+. +..+-++.-... ...++.|.|
T Consensus 43 slsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSL-QkpWy~vlG 121 (336)
T KOG2679|consen 43 SLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSL-QKPWYSVLG 121 (336)
T ss_pred ceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccc-ccchhhhcc
Confidence 347999999 47877766655533 2334567888899944 6776442 122222221111 125899999
Q ss_pred Cchhh
Q 025598 114 NHESR 118 (250)
Q Consensus 114 NHE~~ 118 (250)
|||.+
T Consensus 122 NHDyr 126 (336)
T KOG2679|consen 122 NHDYR 126 (336)
T ss_pred Ccccc
Confidence 99986
No 123
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=90.33 E-value=1.3 Score=38.07 Aligned_cols=75 Identities=15% Similarity=0.205 Sum_probs=41.6
Q ss_pred EEEEeCCC-CCH----HHHHHHHHhc-CCC----------CCCeEEEeccccCCCCC------------------hHHHH
Q 025598 49 VTVCGDIH-GQF----HDLVELFRIG-GNA----------PDTNYLFMGDYVDRGYY------------------SVETV 94 (250)
Q Consensus 49 i~vigDIH-G~~----~~l~~ll~~~-~~~----------~~~~~vflGD~vdrG~~------------------~~evl 94 (250)
+++||||| |.- ..|+.+.+-+ |.. ...++|+.||.|+.-.+ ..+-+
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 68899999 422 3333333322 221 12479999999985432 12223
Q ss_pred HHHHHhhhhcCC--cEEEECCCchhhhhhhh
Q 025598 95 TLLVALKVRYRD--RITILRGNHESRQITQV 123 (250)
Q Consensus 95 ~~l~~l~~~~p~--~v~~l~GNHE~~~~~~~ 123 (250)
..+-.+..+-+. .|.+++||||-......
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lP 112 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANHSLP 112 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCcccccCC
Confidence 333332222222 58899999998765543
No 124
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=90.09 E-value=0.58 Score=42.74 Aligned_cols=75 Identities=9% Similarity=0.043 Sum_probs=44.6
Q ss_pred ccCCCEEEEeCCC-CCHHHH--HHHH-HhcCCCCCCeEEEeccccCCCCChH------HHHHHHHHhhh-hcCCcEEEEC
Q 025598 44 PVKCPVTVCGDIH-GQFHDL--VELF-RIGGNAPDTNYLFMGDYVDRGYYSV------ETVTLLVALKV-RYRDRITILR 112 (250)
Q Consensus 44 ~~~~~i~vigDIH-G~~~~l--~~ll-~~~~~~~~~~~vflGD~vdrG~~~~------evl~~l~~l~~-~~p~~v~~l~ 112 (250)
.-+-+++++||-= |.+... .+.+ +.+...+.+.+|-+||-++.|..+. +..+-++.-.. ...-.++.++
T Consensus 24 ~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vL 103 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVL 103 (394)
T ss_pred CCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeC
Confidence 3345899999953 333222 2233 2334556788999999887776642 23444443221 0012599999
Q ss_pred CCchhh
Q 025598 113 GNHESR 118 (250)
Q Consensus 113 GNHE~~ 118 (250)
||||..
T Consensus 104 GNHDy~ 109 (394)
T PTZ00422 104 GQADWD 109 (394)
T ss_pred Cccccc
Confidence 999973
No 125
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=89.57 E-value=0.61 Score=46.62 Aligned_cols=68 Identities=19% Similarity=0.144 Sum_probs=42.5
Q ss_pred CCCEEEEeCCCCCHH----------------HHHHHHHhcCC-CCCCeEEEeccccCCCCCh--------------HHHH
Q 025598 46 KCPVTVCGDIHGQFH----------------DLVELFRIGGN-APDTNYLFMGDYVDRGYYS--------------VETV 94 (250)
Q Consensus 46 ~~~i~vigDIHG~~~----------------~l~~ll~~~~~-~~~~~~vflGD~vdrG~~~--------------~evl 94 (250)
+.+|+-+.|+||++. .+..+++.+.. .++..++-.||++...|.. .-++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 347999999999853 33345554432 2334566699999754421 1366
Q ss_pred HHHHHhhhhcCCcEEEECCCchhh
Q 025598 95 TLLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 95 ~~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
+.+..+. -=....||||.-
T Consensus 195 ~amN~LG-----yDA~tLGNHEFD 213 (814)
T PRK11907 195 AALEALG-----FDAGTLGNHEFN 213 (814)
T ss_pred HHHhccC-----CCEEEechhhcc
Confidence 6666662 235778999954
No 126
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=88.16 E-value=1.1 Score=43.00 Aligned_cols=66 Identities=20% Similarity=0.137 Sum_probs=40.0
Q ss_pred CEEEEeCCCCCHHH---------------------HHHHHHhcCC-CCCCeEEEeccccCCCCCh-----HHHHHHHHHh
Q 025598 48 PVTVCGDIHGQFHD---------------------LVELFRIGGN-APDTNYLFMGDYVDRGYYS-----VETVTLLVAL 100 (250)
Q Consensus 48 ~i~vigDIHG~~~~---------------------l~~ll~~~~~-~~~~~~vflGD~vdrG~~~-----~evl~~l~~l 100 (250)
.|+-+.|+||++.. +..+++.... .++..++..||.+...+.+ ...++++..+
T Consensus 2 tILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~ 81 (550)
T TIGR01530 2 SIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAA 81 (550)
T ss_pred EEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhcc
Confidence 46778899987533 3444544432 3345566799998755432 3345555555
Q ss_pred hhhcCCcEEEECCCchhh
Q 025598 101 KVRYRDRITILRGNHESR 118 (250)
Q Consensus 101 ~~~~p~~v~~l~GNHE~~ 118 (250)
. --....||||.-
T Consensus 82 g-----~Da~~lGNHEFd 94 (550)
T TIGR01530 82 G-----FDFFTLGNHEFD 94 (550)
T ss_pred C-----CCEEEecccccc
Confidence 2 246788999963
No 127
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=88.02 E-value=2.3 Score=37.19 Aligned_cols=73 Identities=14% Similarity=0.276 Sum_probs=47.8
Q ss_pred CCEEEEeCCCCC----HHHHHHHHHhcC-CCC----CCeEEEeccccCCC----CCh----HHHHHHHHHh-hhhcC---
Q 025598 47 CPVTVCGDIHGQ----FHDLVELFRIGG-NAP----DTNYLFMGDYVDRG----YYS----VETVTLLVAL-KVRYR--- 105 (250)
Q Consensus 47 ~~i~vigDIHG~----~~~l~~ll~~~~-~~~----~~~~vflGD~vdrG----~~~----~evl~~l~~l-~~~~p--- 105 (250)
.+++++||+|=+ +++|.++|+... ..+ +..+|++|+++.+. ..+ .+-.+-|..+ ...+|
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 569999999975 567777777652 212 56799999998652 222 2334444442 33344
Q ss_pred --CcEEEECCCchhhh
Q 025598 106 --DRITILRGNHESRQ 119 (250)
Q Consensus 106 --~~v~~l~GNHE~~~ 119 (250)
..+++|+|-.|-+.
T Consensus 108 ~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 108 EHCYLIFIPGINDPCA 123 (291)
T ss_pred hcCeEEEECCCCCCCc
Confidence 37899999999753
No 128
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=86.41 E-value=0.96 Score=43.25 Aligned_cols=68 Identities=19% Similarity=0.077 Sum_probs=40.0
Q ss_pred CCCEEEEeCCCCCHH----------HHHHHHHhcC-----CCCCCeEEEeccccCCCCC-----hHHHHHHHHHhhhhcC
Q 025598 46 KCPVTVCGDIHGQFH----------DLVELFRIGG-----NAPDTNYLFMGDYVDRGYY-----SVETVTLLVALKVRYR 105 (250)
Q Consensus 46 ~~~i~vigDIHG~~~----------~l~~ll~~~~-----~~~~~~~vflGD~vdrG~~-----~~evl~~l~~l~~~~p 105 (250)
+..|+.++|+||++. .+..+++... ..++..++..||++...+. ...+++++..+.
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g---- 109 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG---- 109 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----
Confidence 447999999999864 2334444432 1234456669999864332 223455555552
Q ss_pred CcEEEECCCchhh
Q 025598 106 DRITILRGNHESR 118 (250)
Q Consensus 106 ~~v~~l~GNHE~~ 118 (250)
-.+.. .||||.-
T Consensus 110 ~Da~t-lGNHEFD 121 (551)
T PRK09558 110 YDAMA-VGNHEFD 121 (551)
T ss_pred CCEEc-ccccccC
Confidence 24444 4999964
No 129
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=85.77 E-value=1.4 Score=44.03 Aligned_cols=67 Identities=21% Similarity=0.176 Sum_probs=41.1
Q ss_pred CCCEEEEeCCCCCHHH----------------HHHHHHhcCC-CCCCeEEEeccccCCCCCh------------------
Q 025598 46 KCPVTVCGDIHGQFHD----------------LVELFRIGGN-APDTNYLFMGDYVDRGYYS------------------ 90 (250)
Q Consensus 46 ~~~i~vigDIHG~~~~----------------l~~ll~~~~~-~~~~~~vflGD~vdrG~~~------------------ 90 (250)
.-+|+.++|+||++.. +..+++.... .++..++-.||++.-.|-.
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 4579999999998532 3345544432 2344566699988543321
Q ss_pred -HHHHHHHHHhhhhcCCcEEEECCCchh
Q 025598 91 -VETVTLLVALKVRYRDRITILRGNHES 117 (250)
Q Consensus 91 -~evl~~l~~l~~~~p~~v~~l~GNHE~ 117 (250)
.-+++++..+. -=....||||.
T Consensus 119 ~~p~i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccC-----CCEEecccccc
Confidence 23556665552 23567899995
No 130
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=84.23 E-value=2.5 Score=36.58 Aligned_cols=66 Identities=18% Similarity=0.206 Sum_probs=43.2
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCC-cEEEECCCchhhhh
Q 025598 47 CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRD-RITILRGNHESRQI 120 (250)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~-~v~~l~GNHE~~~~ 120 (250)
.|.+.|||-|+-..... ..++.|.++-+||+..-|- +.||..+=..+ ...|. .=+.|+||||...-
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~-gslph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWL-GSLPHEYKIVIAGNHELTFD 128 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHh-ccCcceeeEEEeeccceeec
Confidence 47999999998665543 2345678899999987553 44554443322 22243 34689999998653
No 131
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=83.03 E-value=21 Score=29.21 Aligned_cols=85 Identities=18% Similarity=0.233 Sum_probs=60.1
Q ss_pred CeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhhhhhhhcChH----------------HHHHHhCChh
Q 025598 75 TNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYD----------------ECLRKYGNAN 138 (250)
Q Consensus 75 ~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~----------------~~~~~~~~~~ 138 (250)
..+|++|- |...-|+++++..++..+.+ -.++.|+-|.|..+....|.. |-.++| ...
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~-r~yI~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltS 113 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSP-RSYIAADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTS 113 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCc-eEEEEecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhh
Confidence 46899986 99999999999999888874 455699999998766544331 111222 134
Q ss_pred HHHHHHHHhhccCcEEEEcCcEEEEec
Q 025598 139 VWKHFTDLFDYLPLTALIESQVFCLHG 165 (250)
Q Consensus 139 ~~~~~~~~l~~lp~~~~~~~~~l~vHa 165 (250)
++..+...+.++++...+..+++.+-|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 456677778888887777667777766
No 132
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=77.86 E-value=11 Score=35.25 Aligned_cols=27 Identities=22% Similarity=0.304 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHcCCc----EEEEcccCCccC
Q 025598 218 GQDIASQFNHTNGLT----LISRAHQLVMDG 244 (250)
Q Consensus 218 g~~~~~~~l~~~~~~----~ivrgH~~~~~G 244 (250)
.++..+.+++..|++ .||.||+|+.++
T Consensus 514 de~ic~kil~eFGLdpe~ghiINGHtPVke~ 544 (648)
T COG3855 514 DEEICRKILEEFGLDPEGGHIINGHTPVKEK 544 (648)
T ss_pred hHHHHHHHHHHhCCCcccCceecCCCccccc
Confidence 467778889988877 899999998754
No 133
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=68.15 E-value=11 Score=26.48 Aligned_cols=69 Identities=14% Similarity=0.066 Sum_probs=45.8
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCC--CCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCC
Q 025598 46 KCPVTVCGDIHGQFHDLVELFRIGGN--APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGN 114 (250)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~--~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GN 114 (250)
...+.+|=|---|.+.+.++++.+.. .+...++++|++-+.|....+....+.++...+...+++...|
T Consensus 11 ~~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~ 81 (91)
T PF02875_consen 11 PNGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDN 81 (91)
T ss_dssp ETTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSB
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCC
Confidence 34577888855578888888876543 3456678899999988888887777777766655554444443
No 134
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=65.92 E-value=16 Score=35.09 Aligned_cols=60 Identities=20% Similarity=0.201 Sum_probs=38.0
Q ss_pred HHHHHHhcCCCC--CCeEEEecccc--CCCCChHH----HHHHHHH-hhhhcCC-cEEEECCCchhhhhh
Q 025598 62 LVELFRIGGNAP--DTNYLFMGDYV--DRGYYSVE----TVTLLVA-LKVRYRD-RITILRGNHESRQIT 121 (250)
Q Consensus 62 l~~ll~~~~~~~--~~~~vflGD~v--drG~~~~e----vl~~l~~-l~~~~p~-~v~~l~GNHE~~~~~ 121 (250)
++.+|+.++... .|.++-.||.+ |++++..+ ++..+.+ +..-+|+ .++...||||-.-.+
T Consensus 197 ies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N 266 (577)
T KOG3770|consen 197 IESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVN 266 (577)
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHh
Confidence 455665554332 57888899998 56666544 2333333 2334665 689999999987654
No 135
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=61.05 E-value=53 Score=26.04 Aligned_cols=53 Identities=23% Similarity=0.370 Sum_probs=40.8
Q ss_pred EEEEeCCCCCHHHHHHHHH-hcCC------------CCCCeEEEeccccCCCCChHHHHHHHHHhh
Q 025598 49 VTVCGDIHGQFHDLVELFR-IGGN------------APDTNYLFMGDYVDRGYYSVETVTLLVALK 101 (250)
Q Consensus 49 i~vigDIHG~~~~l~~ll~-~~~~------------~~~~~~vflGD~vdrG~~~~evl~~l~~l~ 101 (250)
+++.+-.+||-..+.+.+. .++. .....+||+|=-+|+|.-+.++.++|..++
T Consensus 1 lIvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~ 66 (160)
T PF12641_consen 1 LIVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK 66 (160)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc
Confidence 3667778899888876553 3322 133569999999999999999999999985
No 136
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=59.97 E-value=9.5 Score=36.83 Aligned_cols=26 Identities=23% Similarity=0.235 Sum_probs=22.8
Q ss_pred cCHHHHHHHHHHcCCc----EEEEcccCCc
Q 025598 217 FGQDIASQFNHTNGLT----LISRAHQLVM 242 (250)
Q Consensus 217 ~g~~~~~~~l~~~~~~----~ivrgH~~~~ 242 (250)
-.++....+|+..|++ .||.||+|+.
T Consensus 506 ~~e~~c~~IL~EFgl~~~~~hIINGHvPVk 535 (640)
T PF06874_consen 506 EDEEICDKILEEFGLDPERGHIINGHVPVK 535 (640)
T ss_pred cCHHHHHHHHHHhCCCCCCCeEECCccccc
Confidence 4578888899999998 9999999987
No 137
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=58.09 E-value=26 Score=31.27 Aligned_cols=60 Identities=23% Similarity=0.280 Sum_probs=39.5
Q ss_pred HhhCCCccccCCCEEEEeCCC-CCHHHHHHHHHhcCCCCCCeEEEecccc--CCCCChHHHHHHHHHhhh
Q 025598 36 LVEEWNVQPVKCPVTVCGDIH-GQFHDLVELFRIGGNAPDTNYLFMGDYV--DRGYYSVETVTLLVALKV 102 (250)
Q Consensus 36 l~~~~~~~~~~~~i~vigDIH-G~~~~l~~ll~~~~~~~~~~~vflGD~v--drG~~~~evl~~l~~l~~ 102 (250)
++..|-.+|..+.++++||.| ||+.++.. .+...++-+-|+= --|+....++.+..+|..
T Consensus 46 ~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~-------~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 46 MKTWPWSLPKTPFTWLCGDAHLGNFGAARN-------SKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred HhcCccccCCCCceEEecccccccchhhcc-------CCCceEEEecccchhhccchHHHHHHHHHHHHH
Confidence 445565677788999999999 67776642 2222333377763 237777788887777744
No 138
>PRK05434 phosphoglyceromutase; Provisional
Probab=53.71 E-value=1.1e+02 Score=29.09 Aligned_cols=105 Identities=15% Similarity=0.121 Sum_probs=65.5
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEE--Eeccc
Q 025598 6 DLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYL--FMGDY 83 (250)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~v--flGD~ 83 (250)
++.++-+++.++...+.+.+..+++.+++- ...+++ +-++-=|-+|++.+.|.++++.+...+..+++ ++.|=
T Consensus 79 ~~~~i~~ai~~g~~~~n~~~~~~~~~~~~~----~~~lHl-~GL~SdggVHsh~~hl~~l~~~a~~~g~~~v~vH~~~DG 153 (507)
T PRK05434 79 DLTRINKAIEDGSFFENPALLDAIDKAKKN----GGALHL-MGLLSDGGVHSHIDHLFALLELAKEEGVKKVYVHAFLDG 153 (507)
T ss_pred chHHHHHHHhcCCcccCHHHHHHHHHHHhc----CCeEEE-EEeccCCCcccHHHHHHHHHHHHHHcCCCEEEEEEecCC
Confidence 477888899999999999999999988632 222222 02333367999999999999887666654433 37784
Q ss_pred cCCCCChHHHHHHHHHhh---hhcC-CcEEEECCCchh
Q 025598 84 VDRGYYSVETVTLLVALK---VRYR-DRITILRGNHES 117 (250)
Q Consensus 84 vdrG~~~~evl~~l~~l~---~~~p-~~v~~l~GNHE~ 117 (250)
=|-.|.| -+.+|.++. .... .++-.+.|---.
T Consensus 154 RD~~p~s--~~~~i~~l~~~~~~~~~~~iasv~GRyya 189 (507)
T PRK05434 154 RDTPPKS--ALGYLEELEAKLAELGVGRIASVSGRYYA 189 (507)
T ss_pred CCCCchh--HHHHHHHHHHHHHHhCCeeEEEEeccccc
Confidence 4444443 333333332 2222 256667665433
No 139
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=53.40 E-value=56 Score=24.82 Aligned_cols=60 Identities=15% Similarity=0.163 Sum_probs=41.7
Q ss_pred HHHHHHHHHhcCCCCCCeEEEeccccCCCCC-----hHHHHHHHHHhhhhcCCcEEEE---CCCchhh
Q 025598 59 FHDLVELFRIGGNAPDTNYLFMGDYVDRGYY-----SVETVTLLVALKVRYRDRITIL---RGNHESR 118 (250)
Q Consensus 59 ~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~-----~~evl~~l~~l~~~~p~~v~~l---~GNHE~~ 118 (250)
++.|++.++.....+.-.+.|+|+-.|++.+ -+.....+.+-...+|.++++| -||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 6788888888777666778899999888644 3444444555444567766554 6888776
No 140
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=51.25 E-value=76 Score=29.46 Aligned_cols=67 Identities=10% Similarity=0.020 Sum_probs=47.8
Q ss_pred CCEEEEeCCCC-CHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECC
Q 025598 47 CPVTVCGDIHG-QFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRG 113 (250)
Q Consensus 47 ~~i~vigDIHG-~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~G 113 (250)
..+.+|=|-+. +.+.+.++|+.+...+..+++++||+...|+.+.+.-..+.+......-..+++-|
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSVG 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 45788889666 57888888877654444678999999999999988877776654433323344446
No 141
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=49.74 E-value=67 Score=27.59 Aligned_cols=66 Identities=17% Similarity=0.149 Sum_probs=43.8
Q ss_pred CCEEEEeCCCCCH--HHHHHHHHhcC-CCCCCeEEEeccccCCCC-ChHHHHHHHHHhhhhcCCcEEEECCCchh
Q 025598 47 CPVTVCGDIHGQF--HDLVELFRIGG-NAPDTNYLFMGDYVDRGY-YSVETVTLLVALKVRYRDRITILRGNHES 117 (250)
Q Consensus 47 ~~i~vigDIHG~~--~~l~~ll~~~~-~~~~~~~vflGD~vdrG~-~~~evl~~l~~l~~~~p~~v~~l~GNHE~ 117 (250)
||+.+|||+-|.. ..+..-|..++ ..+.|.+|..|.-..-|. -..+.+..+.+. . -=++-+|||-.
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~----G-~dviT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEA----G-ADVITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHh----C-CCEEecccccc
Confidence 6899999999975 45555554443 234577888888766554 356677777666 2 12455799964
No 142
>TIGR01307 pgm_bpd_ind 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. This protein is about double in length of, and devoid of homology to the form of phosphoglycerate mutase that uses 2,3-bisphosphoglycerate as a cofactor.
Probab=49.28 E-value=1.1e+02 Score=29.12 Aligned_cols=102 Identities=16% Similarity=0.178 Sum_probs=64.0
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEE--Eeccc
Q 025598 6 DLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYL--FMGDY 83 (250)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~v--flGD~ 83 (250)
++.++-++++++...+.+.+..+++.+++- ... +++ +-++-=|-+|++.+.|.++++.+...+..+++ +..|=
T Consensus 75 ~~~ri~~ai~~g~~~~n~~l~~~~~~~~~~---~~~-lHl-~GL~SdGgVHsh~~hl~~l~~~a~~~g~~~v~vH~~~DG 149 (501)
T TIGR01307 75 DLVRISQAIKDGEFFANPALLGAIDRAKDN---NGK-LHL-MGLVSDGGVHSHIDHLIALIELAAERGIEKVVLHAFTDG 149 (501)
T ss_pred chHHHHHHHhcCCcccCHHHHHHHHHHHhc---CCc-eEE-EEeccCCCCcchHHHHHHHHHHHHHcCCCeEEEEEecCC
Confidence 477888999999999999999999998732 222 322 12344477999999999999887666554332 37774
Q ss_pred cCCCCChHHHHHHHHHhhh---hcC-CcEEEECCC
Q 025598 84 VDRGYYSVETVTLLVALKV---RYR-DRITILRGN 114 (250)
Q Consensus 84 vdrG~~~~evl~~l~~l~~---~~p-~~v~~l~GN 114 (250)
=|-.|.| -+.+|.++.. ... .++-.+-|-
T Consensus 150 RD~~p~s--~~~~~~~l~~~~~~~~~~~iasv~GR 182 (501)
T TIGR01307 150 RDTAPKS--AESYLEQLQAFLKEIGNGRIATISGR 182 (501)
T ss_pred CCCCchh--HHHHHHHHHHHHHHhCCEEEEEEeCc
Confidence 3444443 3333333322 111 355566664
No 143
>PF09892 DUF2119: Uncharacterized protein conserved in archaea (DUF2119); InterPro: IPR019218 This entry represents a family of hypothetical archaeal proteins of unknown function.
Probab=48.50 E-value=87 Score=25.67 Aligned_cols=52 Identities=17% Similarity=0.260 Sum_probs=34.0
Q ss_pred EEEEeCCCCCH-HHHHHHHHhcCCCCC--CeEEEeccccCCCCC-------------hHHHHHHHHHhh
Q 025598 49 VTVCGDIHGQF-HDLVELFRIGGNAPD--TNYLFMGDYVDRGYY-------------SVETVTLLVALK 101 (250)
Q Consensus 49 i~vigDIHG~~-~~l~~ll~~~~~~~~--~~~vflGD~vdrG~~-------------~~evl~~l~~l~ 101 (250)
=.+||-+||+= .....+|+.+..... ..+++.= ++++|+. ...+++++..++
T Consensus 9 rLFvgGlHG~Egk~t~~iL~~l~~~~~~~G~l~i~p-lv~~~kYiSTL~~~YY~s~~Gk~il~lIe~y~ 76 (193)
T PF09892_consen 9 RLFVGGLHGDEGKDTSPILKRLKPNDFNNGNLIIIP-LVENSKYISTLDPEYYKSEMGKKILDLIEKYK 76 (193)
T ss_pred EEEEeeccCcchhhHHHHHHHhCcccccCceEEEEe-CCCCCCceeecCHHHhcchhhhHHHHHHHHhC
Confidence 35788999984 556677877664433 4555544 7888754 456677776664
No 144
>KOG3818 consensus DNA polymerase epsilon, subunit B [Replication, recombination and repair]
Probab=48.02 E-value=81 Score=29.46 Aligned_cols=76 Identities=14% Similarity=0.211 Sum_probs=48.7
Q ss_pred CCCEEEEeCCCCCH----HHHHHHHHhcCCCCCCeEEEeccccCC--CCChHHH----HHHHHHhhhhc-----CCcEEE
Q 025598 46 KCPVTVCGDIHGQF----HDLVELFRIGGNAPDTNYLFMGDYVDR--GYYSVET----VTLLVALKVRY-----RDRITI 110 (250)
Q Consensus 46 ~~~i~vigDIHG~~----~~l~~ll~~~~~~~~~~~vflGD~vdr--G~~~~ev----l~~l~~l~~~~-----p~~v~~ 110 (250)
+..+++++|+|=+- .+|.++|......++..+|++|.+..+ +..+..- +..|......+ ...+++
T Consensus 282 d~~fVfLSdV~LD~~~vm~aL~kifqgy~~~pP~~iIlcG~FtS~p~~~~s~~~~k~~f~~LA~~l~~~~~~~ekT~fIF 361 (525)
T KOG3818|consen 282 DTSFVFLSDVFLDDKKVMEALRKIFQGYKDAPPTAIILCGSFTSSPRQTSSSDQLKDGFRWLAAQLTCFRKDYEKTQFIF 361 (525)
T ss_pred CceEEEEehhccccHHHHHHHHHHHhhccCCCCeEEEEeccccccccccchHHHHHHHHHHHHhhccccccccccceEEE
Confidence 34688899999875 455666666666778899999999764 4433222 23333321111 126899
Q ss_pred ECCCchhhhhh
Q 025598 111 LRGNHESRQIT 121 (250)
Q Consensus 111 l~GNHE~~~~~ 121 (250)
|+|-.|-+.-+
T Consensus 362 VPGP~Dp~~~~ 372 (525)
T KOG3818|consen 362 VPGPNDPWVDN 372 (525)
T ss_pred ecCCCCCCcCc
Confidence 99999876543
No 145
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=46.33 E-value=32 Score=29.31 Aligned_cols=86 Identities=26% Similarity=0.296 Sum_probs=46.1
Q ss_pred CeEEEecccc-CCCC---ChHHHHHHHHHhhhh-------cCCcEEEECCCchhhhhhhhhcChHHHHH--HhCChhHHH
Q 025598 75 TNYLFMGDYV-DRGY---YSVETVTLLVALKVR-------YRDRITILRGNHESRQITQVYGFYDECLR--KYGNANVWK 141 (250)
Q Consensus 75 ~~~vflGD~v-drG~---~~~evl~~l~~l~~~-------~p~~v~~l~GNHE~~~~~~~~~~~~~~~~--~~~~~~~~~ 141 (250)
.-.+||||-. ||-. ...=++.+|.+++.. --.+|++|.||||.-.-. . +..... +... .
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~ng-n---y~arlanhkls~----g 157 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFNG-N---YMARLANHKLSA----G 157 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceeccCc-h---HHHHHhhCCCCc----c
Confidence 4578888865 3321 122355666555431 123899999999986421 1 111111 1111 1
Q ss_pred HHHHHhhccCcEEEEc-CcEEEEecCCC
Q 025598 142 HFTDLFDYLPLTALIE-SQVFCLHGGLS 168 (250)
Q Consensus 142 ~~~~~l~~lp~~~~~~-~~~l~vHaGi~ 168 (250)
.-...++.+|+..... .+++..|-|+-
T Consensus 158 DTYnlIKtldVC~YD~erkvltsHHGIi 185 (318)
T PF13258_consen 158 DTYNLIKTLDVCNYDPERKVLTSHHGII 185 (318)
T ss_pred chhhccccccccccCcchhhhhcccCce
Confidence 2234567778765532 36788888884
No 146
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=44.06 E-value=31 Score=29.64 Aligned_cols=39 Identities=31% Similarity=0.377 Sum_probs=26.7
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchh
Q 025598 76 NYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 117 (250)
Q Consensus 76 ~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~ 117 (250)
+++|+||+|++.- -.-+...|.+++.+++..+.+. |-|.
T Consensus 1 ~ilfigdi~g~~G-~~~~~~~l~~lk~~~~~D~vi~--NgEn 39 (255)
T cd07382 1 KILFIGDIVGKPG-RKAVKEHLPKLKKEYKIDFVIA--NGEN 39 (255)
T ss_pred CEEEEEeCCCHHH-HHHHHHHHHHHHHHCCCCEEEE--CCcc
Confidence 4799999998643 3356777888888877555544 4444
No 147
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=43.09 E-value=42 Score=28.76 Aligned_cols=39 Identities=28% Similarity=0.428 Sum_probs=27.9
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCc
Q 025598 76 NYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNH 115 (250)
Q Consensus 76 ~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNH 115 (250)
+++|+||++++ +.-..+-+.|-.+|.+|.-.++++-|+.
T Consensus 2 riLfiGDvvGk-~Gr~~v~~~Lp~lk~kyk~dfvI~N~EN 40 (266)
T COG1692 2 RILFIGDVVGK-PGRKAVKEHLPQLKSKYKIDFVIVNGEN 40 (266)
T ss_pred eEEEEecccCc-chHHHHHHHhHHHHHhhcCcEEEEcCcc
Confidence 58999999985 3344567778888888765666665543
No 148
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=41.63 E-value=34 Score=29.62 Aligned_cols=40 Identities=28% Similarity=0.439 Sum_probs=25.6
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhh
Q 025598 76 NYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 76 ~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
+++|+||++++. .-.-+-..|-+++.+++..+.+ .|=|..
T Consensus 2 ~ilfiGDi~G~~-Gr~~l~~~L~~lk~~~~~D~vI--aNgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGKA-GRKIVKNNLPQLKSKYQADLVI--ANGENT 41 (266)
T ss_pred eEEEEEecCCHH-HHHHHHHHHHHHHHhCCCCEEE--EcCccc
Confidence 589999999641 1223456777888887755444 455554
No 149
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=40.11 E-value=2e+02 Score=23.32 Aligned_cols=77 Identities=19% Similarity=0.271 Sum_probs=55.2
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCC-------------------------
Q 025598 18 KPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNA------------------------- 72 (250)
Q Consensus 18 ~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~------------------------- 72 (250)
..++++++...+.+..+.++++-.= ...++||=++|++--+..+++.+..+
T Consensus 10 vLisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~k 85 (178)
T COG0634 10 VLISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILK 85 (178)
T ss_pred EeeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEec
Confidence 3588999999999888877766432 47889999999987776666554321
Q ss_pred ------CCCeEEEeccccCCCCChHHHHHHHH
Q 025598 73 ------PDTNYLFMGDYVDRGYYSVETVTLLV 98 (250)
Q Consensus 73 ------~~~~~vflGD~vdrG~~~~evl~~l~ 98 (250)
....++++=|++|.|--=..+.+++.
T Consensus 86 Dld~di~grdVLiVeDIiDsG~TLs~i~~~l~ 117 (178)
T COG0634 86 DLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLK 117 (178)
T ss_pred ccccCCCCCeEEEEecccccChhHHHHHHHHH
Confidence 12358889999998875555555554
No 150
>PF12085 DUF3562: Protein of unknown function (DUF3562); InterPro: IPR021945 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 62 to 84 amino acids in length. This protein has two completely conserved residues (A and Y) that may be functionally important.
Probab=38.24 E-value=70 Score=21.51 Aligned_cols=42 Identities=17% Similarity=0.213 Sum_probs=36.7
Q ss_pred CChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcc
Q 025598 2 PSQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQ 43 (250)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~ 43 (250)
|.|.+.++.++.+...-..|.+++..++.+...-+..+-.+.
T Consensus 1 M~~~~~~e~i~~iA~~t~~P~e~V~~my~dt~~~l~~~ARV~ 42 (66)
T PF12085_consen 1 MAQDNVDEVIRSIAEETGTPAETVRRMYDDTMRELSSGARVH 42 (66)
T ss_pred CCcccHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHcCCchh
Confidence 467889999999999999999999999999999888876653
No 151
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=37.66 E-value=37 Score=28.43 Aligned_cols=29 Identities=14% Similarity=-0.004 Sum_probs=25.3
Q ss_pred ccCHHHHHHHHHHcCCcEEEEcccCCccC
Q 025598 216 TFGQDIASQFNHTNGLTLISRAHQLVMDG 244 (250)
Q Consensus 216 ~~g~~~~~~~l~~~~~~~ivrgH~~~~~G 244 (250)
.+|...+.+++++.+++.+|+||....-+
T Consensus 195 ~~~s~~l~~li~~~~v~~~i~GH~H~~~~ 223 (239)
T TIGR03729 195 FLGSQHFGQLLVKYEIKDVIFGHLHRRFG 223 (239)
T ss_pred ccChHHHHHHHHHhCCCEEEECCccCCCC
Confidence 57888899999999999999999988753
No 152
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated
Probab=37.10 E-value=3.3e+02 Score=25.18 Aligned_cols=69 Identities=13% Similarity=0.203 Sum_probs=40.6
Q ss_pred ccCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhh
Q 025598 44 PVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (250)
Q Consensus 44 ~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~ 118 (250)
+.+.|+.|..-+--..+.++++-..+ ..+.|.+++ |.-+ +++..+.+++..++..+| ++.++.||=-..
T Consensus 137 d~~~~l~v~aavg~~~~~~~~v~~lv-~aGvDvI~i--D~a~--g~~~~~~~~v~~ik~~~p-~~~vi~g~V~T~ 205 (404)
T PRK06843 137 DLNNKLRVGAAVSIDIDTIERVEELV-KAHVDILVI--DSAH--GHSTRIIELVKKIKTKYP-NLDLIAGNIVTK 205 (404)
T ss_pred hhhcCeEEEEEEeCCHHHHHHHHHHH-hcCCCEEEE--ECCC--CCChhHHHHHHHHHhhCC-CCcEEEEecCCH
Confidence 34567777555533344343332222 224455554 4444 447788899999998888 466777776554
No 153
>PLN02965 Probable pheophorbidase
Probab=36.22 E-value=1.8e+02 Score=24.13 Aligned_cols=21 Identities=10% Similarity=-0.059 Sum_probs=16.3
Q ss_pred HHHHHHHHHcCC--cEEEEcccC
Q 025598 220 DIASQFNHTNGL--TLISRAHQL 240 (250)
Q Consensus 220 ~~~~~~l~~~~~--~~ivrgH~~ 240 (250)
+.+.++++..+. +.++.||+.
T Consensus 59 ~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 59 RPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHHhcCCCCCEEEEecCc
Confidence 457788888764 799999985
No 154
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=36.01 E-value=2.7e+02 Score=23.55 Aligned_cols=80 Identities=18% Similarity=0.105 Sum_probs=50.8
Q ss_pred CChhHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHhhCCC---c-ccc------------CCCEEEEeCCC--CCHHHH
Q 025598 2 PSQADLDRQIEHLMQ-CKPLPEQEVNILCEQARAILVEEWN---V-QPV------------KCPVTVCGDIH--GQFHDL 62 (250)
Q Consensus 2 ~~~~~~~~~~~~~~~-~~~l~~~~~~~l~~~~~~~l~~~~~---~-~~~------------~~~i~vigDIH--G~~~~l 62 (250)
||+++-..+.+++.+ +-.++++|+..=+..|.+++.++.. + ++. +...+|||+.- =+|+.|
T Consensus 48 ttk~Sk~~l~~rL~rlgf~v~eeei~tsl~aa~~~~~~~~lrP~l~v~d~a~~dF~gidTs~pn~VViglape~F~y~~l 127 (262)
T KOG3040|consen 48 TTKESKRNLHERLQRLGFDVSEEEIFTSLPAARQYLEENQLRPYLIVDDDALEDFDGIDTSDPNCVVIGLAPEGFSYQRL 127 (262)
T ss_pred CcchhHHHHHHHHHHhCCCccHHHhcCccHHHHHHHHhcCCCceEEEcccchhhCCCccCCCCCeEEEecCcccccHHHH
Confidence 567777778888764 4579999999999999999887632 1 111 23466777653 355666
Q ss_pred HHHHHhcCCCCCCeEEEec
Q 025598 63 VELFRIGGNAPDTNYLFMG 81 (250)
Q Consensus 63 ~~ll~~~~~~~~~~~vflG 81 (250)
.+.++.+-..++..+|-+|
T Consensus 128 n~AFrvL~e~~k~~LIai~ 146 (262)
T KOG3040|consen 128 NRAFRVLLEMKKPLLIAIG 146 (262)
T ss_pred HHHHHHHHcCCCCeEEEec
Confidence 6666554444444444443
No 155
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=35.34 E-value=1.5e+02 Score=21.60 Aligned_cols=36 Identities=22% Similarity=0.416 Sum_probs=24.2
Q ss_pred cCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEE
Q 025598 69 GGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITI 110 (250)
Q Consensus 69 ~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~ 110 (250)
+..-+..++|++||= |....+++..+. .++|+++..
T Consensus 59 ~~~fP~~kfiLIGDs---gq~DpeiY~~ia---~~~P~~i~a 94 (100)
T PF09949_consen 59 LRDFPERKFILIGDS---GQHDPEIYAEIA---RRFPGRILA 94 (100)
T ss_pred HHHCCCCcEEEEeeC---CCcCHHHHHHHH---HHCCCCEEE
Confidence 344577889999983 555577776553 456887654
No 156
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=35.10 E-value=2e+02 Score=26.20 Aligned_cols=69 Identities=17% Similarity=0.179 Sum_probs=41.2
Q ss_pred CCEEEEeCCCC-CHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCc
Q 025598 47 CPVTVCGDIHG-QFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNH 115 (250)
Q Consensus 47 ~~i~vigDIHG-~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNH 115 (250)
..+.+|=|-++ +.+.+.++|+.+...+...++++|++..-|..+.+.-..+.+......-..+++-|..
T Consensus 296 ~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi~~g~~ 365 (417)
T TIGR01143 296 NGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFLVGEE 365 (417)
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEEEECHH
Confidence 45677777553 7788888877665433456777888877777766655555444333331334444544
No 157
>TIGR00550 nadA quinolinate synthetase complex, A subunit. This protein, termed NadA, plays a role in the synthesis of pyridine, a precursor to NAD. The quinolinate synthetase complex consists of A protein (this protein) and B protein. B protein converts L-aspartate to iminoaspartate, an unstable reaction product which in the absence of A protein is spontaneously hydrolyzed to form oxaloacetate. The A protein, NadA, converts iminoaspartate to quinolate.
Probab=34.67 E-value=54 Score=29.07 Aligned_cols=36 Identities=17% Similarity=0.161 Sum_probs=28.1
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEecccc
Q 025598 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYV 84 (250)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~v 84 (250)
+..+..++|+=|+-..+.+..+.. +.+.+||+||.+
T Consensus 28 ~~Evk~~aD~~gdS~~l~~~a~~~---~~~~IvF~gv~f 63 (310)
T TIGR00550 28 KDEIQQIADYTGDSLELAQIAAKT---DADIIVFCGVHF 63 (310)
T ss_pred CHHHHHhhcceeeHHHHHHHHHhC---CCCEEEEeCCch
Confidence 446888899999888888777654 567899999963
No 158
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=33.94 E-value=2e+02 Score=26.22 Aligned_cols=7 Identities=43% Similarity=0.833 Sum_probs=3.1
Q ss_pred EEEEeCC
Q 025598 49 VTVCGDI 55 (250)
Q Consensus 49 i~vigDI 55 (250)
++|+|+.
T Consensus 327 i~VlG~~ 333 (417)
T TIGR01143 327 ILVLGDM 333 (417)
T ss_pred EEEEcCc
Confidence 4444444
No 159
>PRK11475 DNA-binding transcriptional activator BglJ; Provisional
Probab=31.16 E-value=88 Score=25.77 Aligned_cols=52 Identities=8% Similarity=0.146 Sum_probs=28.0
Q ss_pred CHHHHHHHHHhcCCCCCCeEEEeccccCC---CCChHHHHHHHHHhhhhcCC-cEEEECCCchh
Q 025598 58 QFHDLVELFRIGGNAPDTNYLFMGDYVDR---GYYSVETVTLLVALKVRYRD-RITILRGNHES 117 (250)
Q Consensus 58 ~~~~l~~ll~~~~~~~~~~~vflGD~vdr---G~~~~evl~~l~~l~~~~p~-~v~~l~GNHE~ 117 (250)
+.+++.+.+ .....+.+++ |+.|- |.+..+++..+ +..+|. +++++-|..+.
T Consensus 25 ~~~~~l~~~---~~~~pd~vl~--dl~d~~mp~~~Gl~~~~~l---~~~~p~~~iIvlt~~~~~ 80 (207)
T PRK11475 25 SQSSFQDAM---SRISFSAVIF--SLSAMRSERREGLSCLTEL---AIKFPRMRRLVIADDDIE 80 (207)
T ss_pred CHHHHHHHh---ccCCCCEEEe--eccccCCCCCCHHHHHHHH---HHHCCCCCEEEEeCCCCH
Confidence 444444443 3333455554 77663 44555555554 445565 67788776544
No 160
>PRK14093 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; Provisional
Probab=30.16 E-value=2.4e+02 Score=26.35 Aligned_cols=66 Identities=15% Similarity=0.109 Sum_probs=45.7
Q ss_pred CCEEEEeCC-CCCHHHHHHHHHhcCCC----CCCeEEEeccccCCCCChHHHHHHHHHhhhh-cCCcEEEECC
Q 025598 47 CPVTVCGDI-HGQFHDLVELFRIGGNA----PDTNYLFMGDYVDRGYYSVETVTLLVALKVR-YRDRITILRG 113 (250)
Q Consensus 47 ~~i~vigDI-HG~~~~l~~ll~~~~~~----~~~~~vflGD~vdrG~~~~evl~~l~~l~~~-~p~~v~~l~G 113 (250)
..+.+|=|- -.+.+.+.+.|+.+... +...++++||+..+|+.+.+....+.+.... ..+.++ +.|
T Consensus 337 ~~~~iIDDsYahnP~s~~aaL~~l~~~~~~~~~r~i~V~G~m~elg~~~~~~h~~~~~~~~~~~~d~v~-~~G 408 (479)
T PRK14093 337 GEATLIDESYNANPASMAAALGVLGRAPVGPQGRRIAVLGDMLELGPRGPELHRGLAEAIRANAIDLVF-CCG 408 (479)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhhhccCCCCEEEEECChHHcCcHHHHHHHHHHHHHHHcCCCEEE-EEc
Confidence 457888883 44788999888776543 3457888999999999988877666555432 234444 446
No 161
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=30.11 E-value=1.9e+02 Score=24.18 Aligned_cols=60 Identities=17% Similarity=0.138 Sum_probs=40.9
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCC------CCHHHHHHHHHhcCCCCCCeEEEeccc
Q 025598 16 QCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIH------GQFHDLVELFRIGGNAPDTNYLFMGDY 83 (250)
Q Consensus 16 ~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIH------G~~~~l~~ll~~~~~~~~~~~vflGD~ 83 (250)
++..+|..+....++++.+++.... ..++++.||+- ..+..+.++++... ...++.-|+-
T Consensus 34 ~Gi~~P~~~~~~~l~rl~~li~~~~-----~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~---~~v~~V~GNH 99 (225)
T TIGR00024 34 QGVMVPGFQFREIIERALSIADKYG-----IEALIINGDLKHEFKKGLEWRFIREFIEVTF---RDLILIRGNH 99 (225)
T ss_pred cCCcCChhHHHHHHHHHHHHHhhcC-----CCEEEEcCccccccCChHHHHHHHHHHHhcC---CcEEEECCCC
Confidence 4566888888888888888876543 23789999986 23455666666542 3566777774
No 162
>COG0770 MurF UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]
Probab=29.98 E-value=2.9e+02 Score=25.89 Aligned_cols=69 Identities=16% Similarity=0.145 Sum_probs=49.3
Q ss_pred CCCEEEEeC-CCCCHHHHHHHHHhcCCCCCCe-EEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCC
Q 025598 46 KCPVTVCGD-IHGQFHDLVELFRIGGNAPDTN-YLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGN 114 (250)
Q Consensus 46 ~~~i~vigD-IHG~~~~l~~ll~~~~~~~~~~-~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GN 114 (250)
...+.+|-| ..++.+.+.+.++.....+... ++++||+..-|.++.++=..+-+......-...++-|.
T Consensus 325 ~~g~~iIdD~YNAnp~sm~aai~~l~~~~~~~~i~VlGdM~ELG~~s~~~H~~v~~~~~~~~~d~v~~~G~ 395 (451)
T COG0770 325 ANGKTLIDDSYNANPDSMRAALDLLAALPGRKGIAVLGDMLELGEESEELHEEVGEYAVEAGIDLVFLVGE 395 (451)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHhhCccCCcEEEeCChhhhCccHHHHHHHHHHHHHhcCceEEEEEcc
Confidence 344555655 4568888988887766555444 89999999999999888777666554432256778888
No 163
>PF06490 FleQ: Flagellar regulatory protein FleQ; InterPro: IPR010518 This domain is found at the N terminus of a subset of sigma54-dependent transcriptional activators that are involved in regulation of flagellar motility e.g. FleQ in Pseudomonas aeruginosa. It is clearly related to IPR001789 from INTERPRO, but lacks the conserved aspartate residue that undergoes phosphorylation in the classic two-component system response regulator (IPR001789 from INTERPRO).
Probab=29.81 E-value=1.3e+02 Score=21.91 Aligned_cols=64 Identities=19% Similarity=0.214 Sum_probs=38.4
Q ss_pred CEEEEeCCCCCHHHHHHHHHhcCCCC-----------------CCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEE
Q 025598 48 PVTVCGDIHGQFHDLVELFRIGGNAP-----------------DTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITI 110 (250)
Q Consensus 48 ~i~vigDIHG~~~~l~~ll~~~~~~~-----------------~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~ 110 (250)
||+||.|=-.....|..+|+-+|... ...+|.+|+.- +....+..+...+|.-=++
T Consensus 1 kILvIddd~~R~~~L~~ILeFlGe~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~-------~~~~~l~~l~~~~~~~Pvl 73 (109)
T PF06490_consen 1 KILVIDDDAERRQRLSTILEFLGEQCEAVSSSDWSQADWSSPWEACAVILGSCS-------KLAELLKELLKWAPHIPVL 73 (109)
T ss_pred CEEEECCcHHHHHhhhhhhhhcCCCeEEecHHHHHHhhhhcCCcEEEEEecCch-------hHHHHHHHHHhhCCCCCEE
Confidence 45566655555566666665544321 22355566642 5666666776777765677
Q ss_pred ECCCchhh
Q 025598 111 LRGNHESR 118 (250)
Q Consensus 111 l~GNHE~~ 118 (250)
+.|.++..
T Consensus 74 llg~~~~~ 81 (109)
T PF06490_consen 74 LLGEHDSP 81 (109)
T ss_pred EECCCCcc
Confidence 88888877
No 164
>PRK05564 DNA polymerase III subunit delta'; Validated
Probab=28.15 E-value=2.2e+02 Score=24.87 Aligned_cols=58 Identities=7% Similarity=0.067 Sum_probs=37.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCC-CHHHHHHHHHhcCCCCCCeEEEe
Q 025598 17 CKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHG-QFHDLVELFRIGGNAPDTNYLFM 80 (250)
Q Consensus 17 ~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG-~~~~l~~ll~~~~~~~~~~~vfl 80 (250)
+..+..+++.++++.+.. .| ..-+.|+++|=|.|. +-.+..++|+.+..++...++++
T Consensus 70 ~~~i~v~~ir~~~~~~~~----~p--~~~~~kv~iI~~ad~m~~~a~naLLK~LEepp~~t~~il 128 (313)
T PRK05564 70 KKSIGVDDIRNIIEEVNK----KP--YEGDKKVIIIYNSEKMTEQAQNAFLKTIEEPPKGVFIIL 128 (313)
T ss_pred CCCCCHHHHHHHHHHHhc----Cc--ccCCceEEEEechhhcCHHHHHHHHHHhcCCCCCeEEEE
Confidence 344666677766655432 22 223678999999887 44566778888877776665554
No 165
>PF04263 TPK_catalytic: Thiamin pyrophosphokinase, catalytic domain; InterPro: IPR007371 Thiamin pyrophosphokinase (TPK, 2.7.6.2 from EC) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamin) to form the coenzyme thiamin pyrophosphate (TPP). Thus, TPK is important for the formation of a coenzyme required for central metabolic functions. The structure of thiamin pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis [].; GO: 0004788 thiamine diphosphokinase activity, 0005524 ATP binding, 0009229 thiamine diphosphate biosynthetic process; PDB: 2F17_B 1IG3_B 3S4Y_B 2OMK_B 1IG0_A 3MEL_B 3CQ9_A 3LM8_B 3K94_B 3L8M_B ....
Probab=28.13 E-value=70 Score=24.14 Aligned_cols=54 Identities=17% Similarity=0.265 Sum_probs=33.9
Q ss_pred CEEEEeCCCCCHHHHHHHHHhc----------------------CCCCCCeEEEeccccCCCCChHHHHHHHHHhh
Q 025598 48 PVTVCGDIHGQFHDLVELFRIG----------------------GNAPDTNYLFMGDYVDRGYYSVETVTLLVALK 101 (250)
Q Consensus 48 ~i~vigDIHG~~~~l~~ll~~~----------------------~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~ 101 (250)
|-++|||.-.--....+.++.. ...+.+.++++|-.-+|-...+..+..+.+++
T Consensus 37 Pd~iiGDfDSi~~~~~~~~~~~~~~~~~~p~kD~TD~e~Al~~~~~~~~~~i~v~Ga~GgR~DH~lanl~~l~~~~ 112 (123)
T PF04263_consen 37 PDLIIGDFDSISPEVLEFYKSKGVEIIHFPEKDYTDLEKALEYAIEQGPDEIIVLGALGGRFDHTLANLNLLYKYK 112 (123)
T ss_dssp -SEEEC-SSSS-HHHHHHHHHCTTEEEEE-STTS-HHHHHHHHHHHTTTSEEEEES-SSSSHHHHHHHHHHHHHHH
T ss_pred CCEEEecCCCCChHHHHHHHhhccceecccccccCHHHHHHHHHHHCCCCEEEEEecCCCcHHHHHHHHHHHHHHH
Confidence 5678888887666665555432 22345678888888777777777777777765
No 166
>smart00411 BHL bacterial (prokaryotic) histone like domain.
Probab=27.61 E-value=1.3e+02 Score=20.70 Aligned_cols=32 Identities=13% Similarity=0.202 Sum_probs=24.5
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhh
Q 025598 7 LDRQIEHLMQCKPLPEQEVNILCEQARAILVE 38 (250)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ 38 (250)
..++++.+.+...++..++..+++...+++..
T Consensus 3 k~eli~~ia~~~~~~~~~v~~vl~~l~~~i~~ 34 (90)
T smart00411 3 KSELIDAIAEKAGLSKKDAKAAVDAFLEIITE 34 (90)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 56777777777779999988888877666543
No 167
>KOG0176 consensus 20S proteasome, regulatory subunit alpha type PSMA5/PUP2 [Posttranslational modification, protein turnover, chaperones]
Probab=27.47 E-value=7.3 Score=32.01 Aligned_cols=34 Identities=18% Similarity=0.301 Sum_probs=23.8
Q ss_pred ccccCHH-HHHHHHH-HcCCcEEEEcccCCccCccccC
Q 025598 214 GYTFGQD-IASQFNH-TNGLTLISRAHQLVMDGYNWCQ 249 (250)
Q Consensus 214 ~~~~g~~-~~~~~l~-~~~~~~ivrgH~~~~~G~~~~~ 249 (250)
...||+. ...+.+. ..|+.+++-||. ..|++.+|
T Consensus 120 aLrFGe~~~~~~~msRPFGValliAG~D--~~gpqL~h 155 (241)
T KOG0176|consen 120 ALRFGEGDDEEAIMSRPFGVALLIAGHD--ETGPQLYH 155 (241)
T ss_pred HhHhCCCcchhhhhcCCcceEEEEeecc--CCCceEEE
Confidence 3467766 3334444 489999999999 67777766
No 168
>PRK11929 putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase; Provisional
Probab=27.18 E-value=3.2e+02 Score=28.06 Aligned_cols=74 Identities=12% Similarity=0.134 Sum_probs=47.8
Q ss_pred CCCEEEEeCCCC-CHHHHHHHHHhcCCCC-CCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhh
Q 025598 46 KCPVTVCGDIHG-QFHDLVELFRIGGNAP-DTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQ 119 (250)
Q Consensus 46 ~~~i~vigDIHG-~~~~l~~ll~~~~~~~-~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~ 119 (250)
...+.+|=|-++ |.+.+.++|+.+...+ ...++++|++-+.|+.+...-..+.+.........+++-|..-..+
T Consensus 833 ~~~~~iidDsya~np~s~~aaL~~l~~~~~~~~i~VlG~~~e~g~~~~~~h~~~g~~~~~~~~~~vi~~Ge~~~~i 908 (958)
T PRK11929 833 SCGTRIIDDTYNANPDSMRAAIDVLAELPNGPRALVLGDMLELGDNGPAMHREVGKYARQLGIDALITLGEAARDA 908 (958)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHhccCCCEEEEECCchhcCcHHHHHHHHHHHHHHHcCCCEEEEECcCHHHH
Confidence 345778889764 7888888887765433 4578889999998888776544444432222224555557654443
No 169
>PLN02538 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Probab=26.75 E-value=1.7e+02 Score=28.23 Aligned_cols=78 Identities=13% Similarity=0.003 Sum_probs=52.2
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEE--Eeccc
Q 025598 6 DLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYL--FMGDY 83 (250)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~v--flGD~ 83 (250)
++.++-+++.++.......+..+++.++ ..-+++- -++-=|-+|++.+.|.++++.+...+..+++ ++.|=
T Consensus 98 ~l~rI~~ai~~g~~~~n~~l~~~~~~~~------~~~lHl~-GL~SdGGVHSh~~Hl~al~~~a~~~gv~~v~vH~f~DG 170 (558)
T PLN02538 98 GAKLVDLALASGKIFEGEGFKYIKEAFA------TGTLHLI-GLLSDGGVHSRLDQLQLLLKGAAERGAKRIRVHVLTDG 170 (558)
T ss_pred hhHHHHHHHhcCCcccCHHHHHHHHHhc------CCeeEEE-EeccCCCcccHHHHHHHHHHHHHHcCCCeEEEEEEcCC
Confidence 4778888888999888888888888761 1112210 1222367999999999999887666654433 27774
Q ss_pred cCCCCCh
Q 025598 84 VDRGYYS 90 (250)
Q Consensus 84 vdrG~~~ 90 (250)
=|-.|.|
T Consensus 171 RDt~p~S 177 (558)
T PLN02538 171 RDVPDGS 177 (558)
T ss_pred CCCCccc
Confidence 4545544
No 170
>PRK04531 acetylglutamate kinase; Provisional
Probab=25.15 E-value=88 Score=28.79 Aligned_cols=22 Identities=14% Similarity=0.199 Sum_probs=12.7
Q ss_pred hHHHHHHHHHhhhhcCCcEEEE
Q 025598 90 SVETVTLLVALKVRYRDRITIL 111 (250)
Q Consensus 90 ~~evl~~l~~l~~~~p~~v~~l 111 (250)
..|+..++...+...|.++++|
T Consensus 20 ~~e~~~~l~~F~~~~~~~~~VI 41 (398)
T PRK04531 20 AKEISQYLKRFSQLDAERFAVI 41 (398)
T ss_pred hhhhHHHHHHHhCcCCCcEEEE
Confidence 3466777776655445554444
No 171
>TIGR01769 GGGP geranylgeranylglyceryl phosphate synthase. This model represents geranylgeranylglyceryl phosphate synthase which catalyzes the first committed step in the synthesis of ether-linked membrane lipids in archaea. The active enzyme is reported to be a homopentamer in Methanobacterium thermoautotrophicum but is reported to be a homodimer in Thermoplasma acidophilum.
Probab=24.92 E-value=2.4e+02 Score=23.40 Aligned_cols=57 Identities=11% Similarity=0.137 Sum_probs=33.3
Q ss_pred HHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCchhhh
Q 025598 60 HDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQ 119 (250)
Q Consensus 60 ~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNHE~~~ 119 (250)
+++.++.+++...+.| .|++|-- -|-....+.+++..+|....-.+++-+||++.-.
T Consensus 11 e~~~~ia~~v~~~gtD-aI~VGGS--~gvt~~~~~~~v~~ik~~~~lPvilfp~~~~~i~ 67 (205)
T TIGR01769 11 DEIEKIAKNAKDAGTD-AIMVGGS--LGIVESNLDQTVKKIKKITNLPVILFPGNVNGLS 67 (205)
T ss_pred HHHHHHHHHHHhcCCC-EEEEcCc--CCCCHHHHHHHHHHHHhhcCCCEEEECCCccccC
Confidence 3445444444444444 4455432 2335566777777777655446888999999754
No 172
>PF02885 Glycos_trans_3N: Glycosyl transferase family, helical bundle domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR017459 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. The glycosyl transferase family includes anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase (2.4.2.2 from EC) catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism. This N-terminal domain is found in various family 3 glycosyl transferases, including anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism.; PDB: 2DSJ_B 2ELC_B 2BPQ_A 1ZVW_B 3QR9_B 1V8G_B 2WK5_C 2J0F_C 2WK6_B 1UOU_A ....
Probab=22.34 E-value=1.4e+02 Score=19.55 Aligned_cols=26 Identities=12% Similarity=0.233 Sum_probs=18.1
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHH
Q 025598 7 LDRQIEHLMQCKPLPEQEVNILCEQA 32 (250)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~~l~~~~ 32 (250)
+..+++++.+++.|+.+++..+++..
T Consensus 2 ~~~~l~~l~~g~~Ls~~e~~~~~~~i 27 (66)
T PF02885_consen 2 IKEILKKLRDGEDLSREEAKAAFDAI 27 (66)
T ss_dssp HHHHHHHHHTT----HHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 57889999999999999998887654
No 173
>COG3207 DIT1 Pyoverdine/dityrosine biosynthesis protein [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.34 E-value=1.5e+02 Score=25.89 Aligned_cols=42 Identities=17% Similarity=0.207 Sum_probs=31.8
Q ss_pred ccccCCCEEEEeCCCC-------------CH-HHHHHHHHhcCCCCCCeEEEeccc
Q 025598 42 VQPVKCPVTVCGDIHG-------------QF-HDLVELFRIGGNAPDTNYLFMGDY 83 (250)
Q Consensus 42 ~~~~~~~i~vigDIHG-------------~~-~~l~~ll~~~~~~~~~~~vflGD~ 83 (250)
+.+..++++|+||=|- .| ++|..+.+.++.+..+.++++||.
T Consensus 101 ~Y~PG~ki~I~SDghvFsD~I~Vdddh~s~Y~d~Lr~m~~~i~~~~i~kI~n~e~~ 156 (330)
T COG3207 101 FYAPGAKITICSDGHVFSDLIRVDDDHISAYQDALRLMIEEIGATHIGKIFNLEDV 156 (330)
T ss_pred hcCCCCEEEEEeCCceehhhccccchhHHHHHHHHHHHHHHcCCCCccceeecchh
Confidence 5667789999998773 23 345566677888888999999985
No 174
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=22.16 E-value=1.4e+02 Score=26.29 Aligned_cols=90 Identities=17% Similarity=0.204 Sum_probs=49.5
Q ss_pred CCCeEEEeccccCCCCChHHHHHHHHHhh-hhcC----CcEEEECCCchhhhhhhhhcChHHHHHHhCChhHHHHHHH-H
Q 025598 73 PDTNYLFMGDYVDRGYYSVETVTLLVALK-VRYR----DRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTD-L 146 (250)
Q Consensus 73 ~~~~~vflGD~vdrG~~~~evl~~l~~l~-~~~p----~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 146 (250)
....+|++||+-=--+..++-|..+++.- ...| .-++++.||==..-+..... ....| .+-++.+.. .
T Consensus 26 ~~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~----~~~~y--k~~Fd~La~ll 99 (291)
T PTZ00235 26 KRHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRN----FHKVY--IKGFEKLSVML 99 (291)
T ss_pred CceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCC----chHHH--HHHHHHHHHHH
Confidence 34679999998544565566555555533 2223 46889999965543221100 11112 122444554 3
Q ss_pred hhccCcEEEEcCcEEEEecCCCC
Q 025598 147 FDYLPLTALIESQVFCLHGGLSP 169 (250)
Q Consensus 147 l~~lp~~~~~~~~~l~vHaGi~~ 169 (250)
++..|.... .-+++||-|-=+|
T Consensus 100 ls~fp~L~~-~s~fVFVPGpnDP 121 (291)
T PTZ00235 100 ISKFKLILE-HCYLIFIPGINDP 121 (291)
T ss_pred HHhChHHHh-cCeEEEECCCCCC
Confidence 666675433 4678888875444
No 175
>COG1015 DeoB Phosphopentomutase [Carbohydrate transport and metabolism]
Probab=21.81 E-value=2.1e+02 Score=26.11 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=30.2
Q ss_pred hHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhC
Q 025598 5 ADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEE 39 (250)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~ 39 (250)
++.+-..+++.+.+.++.+++..+|+.|.+++...
T Consensus 157 TSaDsV~QIaahE~~~~le~LY~~ce~ar~~l~~~ 191 (397)
T COG1015 157 TSADSVFQIAAHEEVFGLEELYELCETAREILLDG 191 (397)
T ss_pred ecCCchhheeeecccccHHHHHHHHHHHHHHhccc
Confidence 34566778888999999999999999999998876
No 176
>PRK10997 yieM hypothetical protein; Provisional
Probab=21.70 E-value=3.8e+02 Score=25.44 Aligned_cols=44 Identities=16% Similarity=0.274 Sum_probs=30.8
Q ss_pred CCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEE-ECCCchhh
Q 025598 74 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITI-LRGNHESR 118 (250)
Q Consensus 74 ~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~-l~GNHE~~ 118 (250)
...+|++.|+++.+. +.+++..+..++.....+++. ..|+|...
T Consensus 417 ~adIVVISDF~~~~~-~eel~~~L~~Lk~~~~~rf~~l~i~~~~~p 461 (487)
T PRK10997 417 DADAVVISDFIAQRL-PDELVAKVKELQRQHQHRFHAVAMSAHGKP 461 (487)
T ss_pred CceEEEECCCCCCCC-hHHHHHHHHHHHHhcCcEEEEEEeCCCCCc
Confidence 467999999987554 567888888887755556664 35666553
No 177
>COG3560 FMR2 Predicted oxidoreductase related to nitroreductase [General function prediction only]
Probab=21.62 E-value=2.7e+02 Score=22.72 Aligned_cols=58 Identities=17% Similarity=0.202 Sum_probs=35.5
Q ss_pred CCChhHHHHHHH-----HHhcCCCCCHHHHHHHHHHHHHHHhhCCCcc-ccCCC-EEEEeCCCCCHHH
Q 025598 1 MPSQADLDRQIE-----HLMQCKPLPEQEVNILCEQARAILVEEWNVQ-PVKCP-VTVCGDIHGQFHD 61 (250)
Q Consensus 1 ~~~~~~~~~~~~-----~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~-~~~~~-i~vigDIHG~~~~ 61 (250)
||+.+.++.+-+ .+.++-+++.+++..+++.+.+ ..|+.. +-+.| ++.+||-|-.+-+
T Consensus 1 ~~~~~~~~ai~~RRTiYaL~k~lp~~~e~i~~~v~~avk---~tPsaFNSQssR~ViL~gd~h~KlWd 65 (200)
T COG3560 1 SMRMTFLNAIENRRTIYALKKNLPVSDEEIKEIVKEAVK---HTPSAFNSQSSRVVILFGDEHDKLWD 65 (200)
T ss_pred CchhHHHHHHHhhhhHhhcCCCCCCcHHHHHHHHHHHHh---cCCcccccCCceEEEEeccchHHHHH
Confidence 445555554433 4556667778888888877654 355543 34445 6778999976533
No 178
>PRK15366 type III secretion system chaperone SsaE; Provisional
Probab=21.51 E-value=1.3e+02 Score=20.96 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=21.6
Q ss_pred CCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHh
Q 025598 1 MPSQADLDRQIEHLMQCKPLPEQEVNILCEQARAILV 37 (250)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~ 37 (250)
|||.|++++.+..=.++- +.++.-+.++..-|+
T Consensus 1 M~TLT~LEDsLr~~~~~a----~~~i~~L~aa~~rL~ 33 (80)
T PRK15366 1 MTTLTRLEDLLLHSREEA----KGIILQLRAARKQLE 33 (80)
T ss_pred CcchhHHHHHHhcCHHHH----HHHHHHHHHHHHHHH
Confidence 999999999887655542 445555555544444
No 179
>PF14165 YtzH: YtzH-like protein
Probab=21.08 E-value=1.6e+02 Score=20.88 Aligned_cols=35 Identities=11% Similarity=0.187 Sum_probs=27.4
Q ss_pred hhHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhC
Q 025598 4 QADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEE 39 (250)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~ 39 (250)
+++++|+++.+..+..++ ..+..++.+.-..-...
T Consensus 28 cEQieRLvksLm~n~~i~-~~ik~~L~~Iy~ysq~G 62 (87)
T PF14165_consen 28 CEQIERLVKSLMANPNID-ADIKQTLEEIYSYSQNG 62 (87)
T ss_pred HHHHHHHHHHHHcCCCcC-HHHHHHHHHHHHHHccC
Confidence 678999999999999995 47888888876654443
No 180
>PF00216 Bac_DNA_binding: Bacterial DNA-binding protein; InterPro: IPR000119 Bacteria synthesise a set of small, usually basic proteins of about 90 residues that bind DNA and are known as histone-like proteins [, ]. Examples include the HU protein in Escherichia coli is a dimer of closely related alpha and beta chains and in other bacteria can be a dimer of identical chains. HU-type proteins have been found in a variety of eubacteria, cyanobacteria and archaebacteria, and are also encoded in the chloroplast genome of some algae []. The integration host factor (IHF), a dimer of closely related chains which seem to function in genetic recombination as well as in translational and transcriptional control [] is found in enterobacteria and viral proteins include the African Swine fever virus protein A104R (or LMW5-AR) []. The exact function of these proteins is not yet clear but they are capable of wrapping DNA and stabilising it from denaturation under extreme environmental conditions. The structure is known for one of these proteins []. The protein exists as a dimer and two "beta-arms" function as the non-specific binding site for bacterial DNA. ; GO: 0003677 DNA binding; PDB: 3C4I_B 2O97_A 1MUL_A 1P78_A 1P51_C 1P71_B 2HT0_A 1OWG_A 2IIF_A 1OUZ_A ....
Probab=20.99 E-value=1.1e+02 Score=21.16 Aligned_cols=32 Identities=13% Similarity=0.228 Sum_probs=22.4
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhh
Q 025598 7 LDRQIEHLMQCKPLPEQEVNILCEQARAILVE 38 (250)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ 38 (250)
-.++++.+++...++..++..+++...+.+..
T Consensus 3 k~eli~~ia~~~~~s~~~v~~vl~~~~~~i~~ 34 (90)
T PF00216_consen 3 KKELIKRIAEKTGLSKKDVEAVLDALFDVIKE 34 (90)
T ss_dssp HHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 45566666666568999988888877666543
No 181
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=20.97 E-value=2.9e+02 Score=23.78 Aligned_cols=62 Identities=19% Similarity=0.157 Sum_probs=36.2
Q ss_pred EEEeCCCCCH--HHHHHHHHhcC-CCCCCeEEEeccccCCCC-ChHHHHHHHHHhhhhcCCcE-EEECCCchh
Q 025598 50 TVCGDIHGQF--HDLVELFRIGG-NAPDTNYLFMGDYVDRGY-YSVETVTLLVALKVRYRDRI-TILRGNHES 117 (250)
Q Consensus 50 ~vigDIHG~~--~~l~~ll~~~~-~~~~~~~vflGD~vdrG~-~~~evl~~l~~l~~~~p~~v-~~l~GNHE~ 117 (250)
.+||||=|.- ..+.+.|..+. ....|.+|..|.=...|. =+.+..+.|+++ .+ ++=.|||=.
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~G~Git~~~~~~L~~~------GvDviT~GNH~w 67 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEYGIDFVIANGENAAGGFGITPKIAEELFKA------GVDVITMGNHIW 67 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTTTSS--HHHHHHHHHH------T-SEEE--TTTT
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCCCCCCCHHHHHHHHhc------CCCEEecCcccc
Confidence 4789999975 56666665443 345688899998776665 356677777777 34 345799964
No 182
>TIGR00055 uppS undecaprenyl diphosphate synthase. Alternate name: undecaprenyl pyrophosphate synthetase. Activity has been demonstrated experimentally for members of this family from Micrococcus luteus, E. coli, Haemophilus influenzae, and Streptococcus pneumoniae.
Probab=20.10 E-value=1.5e+02 Score=25.00 Aligned_cols=48 Identities=23% Similarity=0.305 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHHhhC-CCccccCCCEEEEeCCCCCHHHHHHHHHh
Q 025598 21 PEQEVNILCEQARAILVEE-WNVQPVKCPVTVCGDIHGQFHDLVELFRI 68 (250)
Q Consensus 21 ~~~~~~~l~~~~~~~l~~~-~~~~~~~~~i~vigDIHG~~~~l~~ll~~ 68 (250)
|.+|+..|+.-..+.+.++ +.+.+-..++-+|||+-.=-+.+.+.++.
T Consensus 60 p~~EV~~Lm~L~~~~l~~~~~~~~~~~irvr~iGd~~~Lp~~~~~~i~~ 108 (226)
T TIGR00055 60 PKEEVDFLMELFEKKLDREVKELHRYNVRIRIIGDLSLLSKELQEKIKK 108 (226)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEeChhhCCHHHHHHHHH
Confidence 6788888888887777754 33445567999999998766777776643
No 183
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=20.06 E-value=3e+02 Score=22.64 Aligned_cols=66 Identities=9% Similarity=-0.056 Sum_probs=34.2
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCChHHHHHHHHHhhhhcCCcEEEECCCc
Q 025598 47 CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNH 115 (250)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~~~~~~~vflGD~vdrG~~~~evl~~l~~l~~~~p~~v~~l~GNH 115 (250)
.++.+++.=. ......+++..+....-.+++.+|-+.++....+.+..+.+.....|.+++++ |..
T Consensus 112 ~~l~i~Tn~~--~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~I-GDs 177 (229)
T PRK13226 112 CVWGIVTNKP--EYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYV-GDD 177 (229)
T ss_pred CeEEEECCCC--HHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEe-CCC
Confidence 4677777633 34445566666554433466777766554333444444443322345455444 444
Done!