Query 025600
Match_columns 250
No_of_seqs 171 out of 1533
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 07:29:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025600.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025600hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 7.5E-55 1.6E-59 366.6 22.7 232 9-249 2-237 (238)
2 PLN00027 aquaporin TIP; Provis 100.0 7.9E-52 1.7E-56 354.8 26.0 246 5-250 7-252 (252)
3 PLN00166 aquaporin TIP2; Provi 100.0 3.2E-50 6.9E-55 343.9 26.4 243 7-250 7-249 (250)
4 PLN00184 aquaporin NIP1; Provi 100.0 8.6E-50 1.9E-54 347.5 25.3 222 14-242 50-278 (296)
5 PLN00167 aquaporin TIP5; Provi 100.0 8.9E-49 1.9E-53 335.8 26.7 229 9-238 13-241 (256)
6 PF00230 MIP: Major intrinsic 100.0 1.9E-49 4.2E-54 336.6 20.9 221 11-232 1-227 (227)
7 PLN00182 putative aquaporin NI 100.0 1.5E-48 3.2E-53 337.8 25.5 216 16-238 40-255 (283)
8 KOG0224 Aquaporin (major intri 100.0 5.6E-50 1.2E-54 339.4 13.6 225 14-243 28-281 (316)
9 PLN00026 aquaporin NIP; Provi 100.0 3.5E-48 7.7E-53 336.7 23.9 217 14-238 67-283 (298)
10 PTZ00016 aquaglyceroporin; Pro 100.0 7.8E-48 1.7E-52 336.0 25.1 219 14-238 46-291 (294)
11 COG0580 GlpF Glycerol uptake f 100.0 5E-48 1.1E-52 324.3 21.4 218 16-237 3-240 (241)
12 PRK05420 aquaporin Z; Provisio 100.0 3.9E-47 8.4E-52 322.0 24.8 214 18-238 2-229 (231)
13 PLN00183 putative aquaporin NI 100.0 2E-44 4.3E-49 311.0 24.9 219 14-240 41-259 (274)
14 cd00333 MIP Major intrinsic pr 100.0 3.5E-43 7.5E-48 298.3 21.7 212 19-235 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 3.4E-42 7.3E-47 290.0 20.9 209 23-232 1-216 (216)
16 PLN00026 aquaporin NIP; Provi 99.7 1E-16 2.2E-21 139.9 9.0 105 134-238 65-173 (298)
17 PLN00184 aquaporin NIP1; Provi 99.7 2.4E-16 5.1E-21 137.8 9.3 103 136-238 50-156 (296)
18 PLN00167 aquaporin TIP5; Provi 99.6 4.4E-15 9.5E-20 127.7 10.9 103 136-238 18-129 (256)
19 PLN00183 putative aquaporin NI 99.6 4.2E-15 9.1E-20 128.8 8.5 103 136-238 41-147 (274)
20 PLN00166 aquaporin TIP2; Provi 99.6 7.7E-15 1.7E-19 125.8 9.9 102 137-238 15-125 (250)
21 PLN00182 putative aquaporin NI 99.6 9.6E-15 2.1E-19 127.0 9.0 102 137-238 39-144 (283)
22 PRK05420 aquaporin Z; Provisio 99.5 2.3E-14 4.9E-19 121.7 9.5 99 140-238 2-105 (231)
23 cd00333 MIP Major intrinsic pr 99.5 1.1E-14 2.3E-19 123.7 7.0 98 141-238 1-103 (228)
24 PLN00027 aquaporin TIP; Provis 99.5 3E-14 6.4E-19 122.5 9.3 101 138-238 18-127 (252)
25 PTZ00016 aquaglyceroporin; Pro 99.5 3.1E-14 6.7E-19 124.8 8.4 101 138-238 48-152 (294)
26 COG0580 GlpF Glycerol uptake f 99.4 1.5E-13 3.3E-18 116.0 6.3 101 138-238 3-110 (241)
27 TIGR00861 MIP MIP family chann 99.4 2.4E-13 5.1E-18 114.6 7.2 94 145-238 1-103 (216)
28 KOG0224 Aquaporin (major intri 99.4 2.5E-13 5.3E-18 116.3 6.1 101 138-238 30-135 (316)
29 KOG0223 Aquaporin (major intri 99.4 2.5E-12 5.3E-17 108.9 8.7 103 136-238 7-113 (238)
30 PF00230 MIP: Major intrinsic 99.3 3.1E-12 6.7E-17 108.5 5.4 102 137-238 5-116 (227)
31 PRK11562 nitrite transporter N 89.1 12 0.00025 32.7 12.4 173 57-240 59-253 (268)
32 PF01226 Form_Nir_trans: Forma 78.8 26 0.00056 30.1 9.9 139 17-159 20-170 (250)
33 COG2116 FocA Formate/nitrite f 74.9 57 0.0012 28.4 17.8 175 55-238 63-259 (265)
34 PRK10805 formate transporter; 74.6 60 0.0013 28.5 17.2 100 56-159 68-181 (285)
35 PRK09713 focB putative formate 64.9 98 0.0021 27.2 14.0 101 55-159 66-180 (282)
36 PF03033 Glyco_transf_28: Glyc 46.5 8.2 0.00018 29.1 0.5 18 78-95 8-25 (139)
37 PF09512 ThiW: Thiamine-precur 29.7 2.4E+02 0.0052 22.3 6.3 26 98-123 123-148 (150)
38 PRK14218 camphor resistance pr 29.6 2.6E+02 0.0057 21.5 7.8 116 98-234 6-125 (133)
39 PRK12446 undecaprenyldiphospho 29.2 17 0.00036 32.8 -0.3 21 74-94 7-27 (352)
40 TIGR00790 fnt formate/nitrite 26.2 4E+02 0.0087 22.5 16.6 99 56-159 43-157 (239)
41 TIGR02587 putative integral me 24.3 2.9E+02 0.0064 24.1 6.4 58 95-152 96-153 (271)
42 COG3301 NrfD Formate-dependent 23.6 5.2E+02 0.011 22.9 9.3 43 192-236 223-268 (305)
43 PRK11375 allantoin permease; P 21.0 7E+02 0.015 23.5 9.0 22 216-237 449-470 (484)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.5e-55 Score=366.58 Aligned_cols=232 Identities=48% Similarity=0.805 Sum_probs=209.5
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHH
Q 025600 9 PAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTF 88 (250)
Q Consensus 9 ~~~~~~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTl 88 (250)
.++..+++.+|++++||+||++++|++|++.+...+ ...+.+.+.+++.+|+.+++.++.++++||||+|||||+
T Consensus 2 ~~~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~-----~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~ 76 (238)
T KOG0223|consen 2 SGELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPK-----YGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTL 76 (238)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----cCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHH
Confidence 456778999999999999999999999999976543 123567899999999999999999999999999999999
Q ss_pred HHHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCC----cccceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCC
Q 025600 89 GAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGL----ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDP 164 (250)
Q Consensus 89 a~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~ 164 (250)
++++.|++++.+++.|+.+|++|+++|+.+++.+.+++ ......++++.+..|++..|++.||.|+++++.+++|+
T Consensus 77 a~~~~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~ 156 (238)
T KOG0223|consen 77 AFAVGGKISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDP 156 (238)
T ss_pred HHHHhCCCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecC
Confidence 99999999999999999999999999999999999873 33445678889999999999999999999999977888
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCCCceeecchhHHHHHHHHHHHHHHHhcCCCCCCC
Q 025600 165 KRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYTVAFICPNTHEQ 244 (250)
Q Consensus 165 ~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~~~~~~~ 244 (250)
|+. .+.|+.||+++.+.+++.+++||++|||||+|||++..+.|+++|+||++|++|+++++++|+.++.++ .++.
T Consensus 157 ~~~---~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~-~~~~ 232 (238)
T KOG0223|consen 157 RRS---ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPD-ESEP 232 (238)
T ss_pred CCc---ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCc-cccc
Confidence 775 579999999999999999999999999999999999999999999999999999999999999999884 4454
Q ss_pred CCCCC
Q 025600 245 LPSTD 249 (250)
Q Consensus 245 ~~~~~ 249 (250)
+++.|
T Consensus 233 ~~~~~ 237 (238)
T KOG0223|consen 233 TKSAD 237 (238)
T ss_pred cCccC
Confidence 44443
No 2
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=7.9e-52 Score=354.84 Aligned_cols=246 Identities=82% Similarity=1.354 Sum_probs=211.4
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccch
Q 025600 5 AIGNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNP 84 (250)
Q Consensus 5 ~~~~~~~~~~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NP 84 (250)
..++.+|..+++.+|++++||+||++|+|+++++.+......++.+..+.+++.+++.+|+++.+.+++++++||+|+||
T Consensus 7 ~~~~~~~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NP 86 (252)
T PLN00027 7 AIGTPGEASHPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNP 86 (252)
T ss_pred cCCchHhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccCh
Confidence 44455565678899999999999999999999987543222222111234677889999999999999999999999999
Q ss_pred HHHHHHHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCcccceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCC
Q 025600 85 AVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDP 164 (250)
Q Consensus 85 avTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~ 164 (250)
|+|++.++.|+++|.+.+.|+++|++|+++|+.+.+.+.++.....+.+.++.+.+++++.|+++|++|+++++....|+
T Consensus 87 Avtl~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~ 166 (252)
T PLN00027 87 AVTFGAFIGGNITLLRGILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDP 166 (252)
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999888766545566677788999999999999999999998855666
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCCCceeecchhHHHHHHHHHHHHHHHhcCCCCCCC
Q 025600 165 KRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYTVAFICPNTHEQ 244 (250)
Q Consensus 165 ~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~~~~~~~ 244 (250)
++...+...|+.+|+.+...+++.+++||++|||||||||+++.++|+++|+||++|++|+++++++|++++.+++.+++
T Consensus 167 ~~~~~~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~~~~~~ 246 (252)
T PLN00027 167 KKGDLGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELIFIGSTTHEQ 246 (252)
T ss_pred ccCCccchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 65433457899999999999999999999999999999999999999999999999999999999999999877677778
Q ss_pred CCCCCC
Q 025600 245 LPSTDF 250 (250)
Q Consensus 245 ~~~~~~ 250 (250)
.++.||
T Consensus 247 ~~~~~~ 252 (252)
T PLN00027 247 LPTTDY 252 (252)
T ss_pred cCCCCC
Confidence 788776
No 3
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=3.2e-50 Score=343.88 Aligned_cols=243 Identities=56% Similarity=0.960 Sum_probs=200.4
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHH
Q 025600 7 GNPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAV 86 (250)
Q Consensus 7 ~~~~~~~~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPav 86 (250)
.+.+|..+++.+|++++||+||++++|+++++.....+..+.....+.+++.+++.+|+.+++.+++++++||+|+|||+
T Consensus 7 ~~~~~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAv 86 (250)
T PLN00166 7 GSLGDSFSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAV 86 (250)
T ss_pred CchHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHH
Confidence 34456567888999999999999999999998764222221111112357788999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCcccceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 025600 87 TFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 166 (250)
Q Consensus 87 Tla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~ 166 (250)
|++.++.|+++|.+.+.|+++|++|+++|+.+.+.++++...+.....++.+..++++.|+++|++|+++++....|+++
T Consensus 87 t~~~~l~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~ 166 (250)
T PLN00166 87 TLGLAIGGNITIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKK 166 (250)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999999999999999998876533222234456788999999999999999999985555444
Q ss_pred CCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCCCceeecchhHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 025600 167 GNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYTVAFICPNTHEQLP 246 (250)
Q Consensus 167 ~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~~~~~~~~~ 246 (250)
.......|+.+|+.+...++..+++||+++||||||||+++.++|+++|+||++|++|+++++++|+.++.+.+ ++...
T Consensus 167 ~~~~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~~~~~~wvywvgPi~Ga~~aa~~y~~l~~~~~-~~~~~ 245 (250)
T PLN00166 167 GSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIGSY-AAAPT 245 (250)
T ss_pred cccccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHhcccC-CCCCC
Confidence 33335689999999999999999999999999999999999999999999999999999999999998876523 33333
Q ss_pred CCCC
Q 025600 247 STDF 250 (250)
Q Consensus 247 ~~~~ 250 (250)
+|||
T Consensus 246 ~~~~ 249 (250)
T PLN00166 246 SEDY 249 (250)
T ss_pred Cccc
Confidence 4454
No 4
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=8.6e-50 Score=347.48 Aligned_cols=222 Identities=28% Similarity=0.401 Sum_probs=188.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHh
Q 025600 14 QPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVG 93 (250)
Q Consensus 14 ~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~ 93 (250)
+.+++|++++||+||++|+|++++++.... . .+ ...+++.++++||+++++.+++++++||||+|||||+++++.
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~-~-~~---~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~ 124 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNM-Q-ND---NVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASC 124 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcc-c-CC---CccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHh
Confidence 446889999999999999999998875321 1 11 123678889999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCc------c-cceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 025600 94 GHITFVRSILYWIAQLLGSVVACLLLKFSTGGLE------T-SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 166 (250)
Q Consensus 94 g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~------~-~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~ 166 (250)
|+++|++.+.|+++|++|+++|+++++.+++... . ..+.+.+..+.+++++.|+++|++|+++++.+..|++.
T Consensus 125 g~~~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~ 204 (296)
T PLN00184 125 GRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRA 204 (296)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcC
Confidence 9999999999999999999999999998885211 0 11233445688999999999999999999985444332
Q ss_pred CCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCCCceeecchhHHHHHHHHHHHHHHHhcCCCCC
Q 025600 167 GNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYTVAFICPNTH 242 (250)
Q Consensus 167 ~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~~~~~ 242 (250)
.+...|+.||+++.+.+++.+++||++|||||||||+++.+.|+++|+||++|++|+++++++|+.++.+++++
T Consensus 205 --~~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~~~~~~WVy~vgPilGa~laal~y~~l~~~~~~~ 278 (296)
T PLN00184 205 --IGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTDKPL 278 (296)
T ss_pred --CCcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhhcccccchHHhHHHHHHHHHHHHHHHHhcCCCcc
Confidence 23468999999999999999999999999999999999999999999999999999999999999997654433
No 5
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=8.9e-49 Score=335.79 Aligned_cols=229 Identities=50% Similarity=0.843 Sum_probs=194.9
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHH
Q 025600 9 PAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTF 88 (250)
Q Consensus 9 ~~~~~~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTl 88 (250)
.++..+++++|++++||+||++++|+++++........+++...+.+++.+++.+|+++.+.+++++++||+|+|||+|+
T Consensus 13 ~~~~~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl 92 (256)
T PLN00167 13 FQQSVTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTF 92 (256)
T ss_pred hhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHH
Confidence 44555788999999999999999999999876432222222222346888999999999999999999999999999999
Q ss_pred HHHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCcccceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 025600 89 GAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGN 168 (250)
Q Consensus 89 a~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~ 168 (250)
+.++.|+++|++.+.|+++|++|+++|+.+++.++++...+.....++.+.+++++.|+++|++|+++++. ..|+++..
T Consensus 93 ~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~-~~~~~~~~ 171 (256)
T PLN00167 93 GMAVGGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFGLVYTVYA-AGDPRRGL 171 (256)
T ss_pred HHHHhCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHHH-hccccccC
Confidence 99999999999999999999999999999998887643223333334557789999999999999999988 46655543
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCCCceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 169 IGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 169 ~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
.....|+.+|+.+....++.+++||+++||||||+|+++.+.|+++|+||++|++|+++++++|++++.+
T Consensus 172 ~~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~~~~~~wvywvgP~~Ga~l~a~~y~~l~~~ 241 (256)
T PLN00167 172 LGAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLYDNVVFP 241 (256)
T ss_pred CCCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhccCccCcEEEeHHHHHHHHHHHHHHHHHhCC
Confidence 3446899999999999999999999999999999999999899999999999999999999999999866
No 6
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=1.9e-49 Score=336.58 Aligned_cols=221 Identities=39% Similarity=0.630 Sum_probs=190.0
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCC-CCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHH
Q 025600 11 EIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGA-ATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFG 89 (250)
Q Consensus 11 ~~~~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~-~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla 89 (250)
|.++++++|++++||+||++++|+++++.+.......+.. ....++..+++.+|+++...++.++++||||+||+||++
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla 80 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLA 80 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhh
Confidence 5678999999999999999999999997764433332211 112478889999999999999999999999999999999
Q ss_pred HHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCC--cccc--eeccCCCchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 025600 90 AFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGL--ETSA--FALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPK 165 (250)
Q Consensus 90 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~--~~~~--~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~ 165 (250)
.++.|++++++++.|+++|++|+++|+.+++.++++. .... ..+.++.+..++++.|+++|++|+++++.. .|++
T Consensus 81 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~-~~~~ 159 (227)
T PF00230_consen 81 FALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAV-ADDK 159 (227)
T ss_dssp HHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHH-TSTT
T ss_pred eeeeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhh-cccc
Confidence 9999999999999999999999999999999998762 2222 346678899999999999999999999985 4544
Q ss_pred CCCC-CchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCCCceeecchhHHHHHHHHHHHH
Q 025600 166 RGNI-GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAY 232 (250)
Q Consensus 166 ~~~~-~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~vy~~ap~~Ga~~a~~~~ 232 (250)
+... +...|+.||+.+....+..++.||+++||||+|+++++.+.|+++|+||++|++|+++|+++|
T Consensus 160 ~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 160 RKFPLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGIWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp SSSTSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred cccccccccceeEEEEEeecccccccccccccCchhhcCceeecccCCeEEEEEehHHHHHHHHHhhC
Confidence 4333 456899999999999999999999999999999999999999999999999999999999987
No 7
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=1.5e-48 Score=337.80 Aligned_cols=216 Identities=29% Similarity=0.467 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHhcC
Q 025600 16 DALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGH 95 (250)
Q Consensus 16 ~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~g~ 95 (250)
+++|++++||+||++|+|++++++... .+.++ ..+.+.++++||+++++.++.++++||||+|||||++.++.|+
T Consensus 40 ~~~~~~~aEflgTflLvf~g~g~~~~~-~~~~~----~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~ 114 (283)
T PLN00182 40 CLTQKLIAEMIGTYFIIFSGCGVVVVN-VLYGG----TITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRR 114 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh-hccCC----CcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcC
Confidence 577999999999999999999987532 22111 1356778899999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHhhhHHHHHHHHHHHhCCCcccceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHH
Q 025600 96 ITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPI 175 (250)
Q Consensus 96 ~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ 175 (250)
++|.+.+.|+++|++|+++|+++++.+++......+.+.++.+.+++++.|+++|++|+++++....++++ .+...++
T Consensus 115 ~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~--~~~~~~l 192 (283)
T PLN00182 115 FPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRA--VGELAGI 192 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheecccc--CCcchhH
Confidence 99999999999999999999999999886433344555666788999999999999999999875444332 2345799
Q ss_pred HHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCCCceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 176 AIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 176 ~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
.+|+.+.+.+++.+++||+++||||+|+++++.+.|+++|+||++|++|+++++++|+.+..+
T Consensus 193 ~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~~~~~~wvY~vap~lGA~lgally~~l~~~ 255 (283)
T PLN00182 193 AVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNLIRFT 255 (283)
T ss_pred HHHHHHHHHHHHccccCccccChHHHHHHHHHhccccceeHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999998899999999999999999999999998753
No 8
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-50 Score=339.38 Aligned_cols=225 Identities=26% Similarity=0.408 Sum_probs=195.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHh
Q 025600 14 QPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVG 93 (250)
Q Consensus 14 ~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~ 93 (250)
++++.|++++||+||++|+++|+++++. ..+++. ...+++.+.++||+++++++++.+++||||+|||||+++++.
T Consensus 28 ~~~l~Re~LAEFlGT~vL~~~G~g~v~Q-~vls~g---~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~ 103 (316)
T KOG0224|consen 28 RNELLREFLAEFLGTFVLVVFGLGSVAQ-AVLSGG---TGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCIL 103 (316)
T ss_pred HHHHHHHHHHHHHhHHHHHhhccceeEE-EEeccC---CCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHh
Confidence 4678999999999999999999999964 344432 124788889999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHhhhHHHHHHHHHHHhCC----------------Ccccce--eccCCCchhHHHHHHHHHHHHHHH
Q 025600 94 GHITFVRSILYWIAQLLGSVVACLLLKFSTGG----------------LETSAF--ALSSGVGAWNAVVFEIVMTFGLVY 155 (250)
Q Consensus 94 g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~----------------~~~~~~--~~~~~~~~~~~~~~E~~~T~~l~~ 155 (250)
||++|+|.+.|+++|++||++|++.++..+.+ .+...| .|+|.++.+++|+.|+++|.+|+.
T Consensus 104 g~~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~ 183 (316)
T KOG0224|consen 104 GRLPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVL 183 (316)
T ss_pred cCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999987631 112234 356788999999999999999999
Q ss_pred HHHHhccCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc----C-------CCceeecchhHHHH
Q 025600 156 TVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW----T-------WDNHWVYWLGPFIG 224 (250)
Q Consensus 156 ~v~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~----~-------~~~~~vy~~ap~~G 224 (250)
.++. ++|++|.....+.|+.+|+.+.++..+.+..+|..+||||||+||++.. + -.+.|+.|++|++|
T Consensus 184 ~l~a-I~D~rN~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~G 262 (316)
T KOG0224|consen 184 CLFA-ITDKRNPIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIG 262 (316)
T ss_pred heeE-EecCCCCCCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhhh
Confidence 9988 6899996666889999999999999999999999999999999999841 1 14679999999999
Q ss_pred HHHHHHHHHHHhcCCCCCC
Q 025600 225 AAIAAIAYTVAFICPNTHE 243 (250)
Q Consensus 225 a~~a~~~~~~l~~~~~~~~ 243 (250)
+++++++|++++..+++++
T Consensus 263 ai~G~~iY~~~Ig~h~~~~ 281 (316)
T KOG0224|consen 263 AILGGWIYDFFIGFHIPRE 281 (316)
T ss_pred hhhhhhhheeeeeccCCCC
Confidence 9999999999887655533
No 9
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=3.5e-48 Score=336.68 Aligned_cols=217 Identities=29% Similarity=0.444 Sum_probs=185.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHh
Q 025600 14 QPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVG 93 (250)
Q Consensus 14 ~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~ 93 (250)
..+++|++++||+||++|+|+++++.....+. . ...+++.+++++|+++++.+++++++||||+|||||++.++.
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~-~----~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~ 141 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKY-D----GAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAAL 141 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhcccc-C----CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHh
Confidence 44688999999999999999999765432111 1 113577788999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCcccceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchh
Q 025600 94 GHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIA 173 (250)
Q Consensus 94 g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~ 173 (250)
|+++|++.+.|+++|++|+++|+++++.++++..... .+.++.+..++++.|+++|++|+++++....|+++ .+...
T Consensus 142 g~~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~~g-~t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~--~~~~~ 218 (298)
T PLN00026 142 RHFPWKHVPAYIAAQVSASICASFALKGVFHPFMSGG-VTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRA--VGELA 218 (298)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCc-eeeecccHHHHHHHHHHHHHHHHHhheeeecCCCC--cCCcc
Confidence 9999999999999999999999999999886432221 13356788999999999999999999874445433 22357
Q ss_pred HHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCCCceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 174 PIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 174 ~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
++.+|+.+...+++.+++||+++||||||+|++..++|+++|+||++|++|+++++++|+.+..+
T Consensus 219 ~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~~~~~~wVy~vaPilGAilga~ly~~~~~~ 283 (298)
T PLN00026 219 GIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLR 283 (298)
T ss_pred chHHHHHHHHHHHHhcccCccccChHHHHHHHHhcCCchheeHHHHHHHHHHHHHHHHHHHHhCc
Confidence 89999999999999999999999999999999999999999999999999999999999998655
No 10
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=7.8e-48 Score=336.04 Aligned_cols=219 Identities=28% Similarity=0.421 Sum_probs=187.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHh
Q 025600 14 QPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVG 93 (250)
Q Consensus 14 ~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~ 93 (250)
.++++|++++||+||++++|+++++..... ..+ .+.+++.+++++|+++.+.+++++++||+|+|||||++.++.
T Consensus 46 ~~~~~~~~laEfigT~llvf~g~g~~~~~~-~~~----~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~ 120 (294)
T PTZ00016 46 YRPNVREYVAEFLGTFVLLFFGEGVVATTH-TVG----NNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVF 120 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccc-ccC----CCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHh
Confidence 377889999999999999999998875321 111 123577889999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCC-----------------cccceeccCCCchhHHHHHHHHHHHHHHHH
Q 025600 94 GHITFVRSILYWIAQLLGSVVACLLLKFSTGGL-----------------ETSAFALSSGVGAWNAVVFEIVMTFGLVYT 156 (250)
Q Consensus 94 g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~ 156 (250)
|+++|.+.+.|+++|++|+++|+++++.++++. ....+.+.|+.+..++++.|+++|++|+++
T Consensus 121 g~i~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ 200 (294)
T PTZ00016 121 GKFPWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLV 200 (294)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999887531 012244556778899999999999999999
Q ss_pred HHHhccCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcc------cCCC----ceeecchhHHHHHH
Q 025600 157 VYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVS------WTWD----NHWVYWLGPFIGAA 226 (250)
Q Consensus 157 v~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~------~~~~----~~~vy~~ap~~Ga~ 226 (250)
++. ..|+++.......|+.||+.+.+..++.++.||++|||||||||+++. ..|+ ++|+||++|++|++
T Consensus 201 ila-~~d~~~~~~~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~ 279 (294)
T PTZ00016 201 ILA-ITDPNNCPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAV 279 (294)
T ss_pred HHH-hccCccCCCcCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHH
Confidence 998 467666443346899999999999999999999999999999999985 2454 58999999999999
Q ss_pred HHHHHHHHHhcC
Q 025600 227 IAAIAYTVAFIC 238 (250)
Q Consensus 227 ~a~~~~~~l~~~ 238 (250)
+++++|++++.+
T Consensus 280 ~aally~~ll~~ 291 (294)
T PTZ00016 280 LGMFLYDKFIPP 291 (294)
T ss_pred HHHHHHHHHhCC
Confidence 999999999866
No 11
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-48 Score=324.25 Aligned_cols=218 Identities=31% Similarity=0.459 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHhcC
Q 025600 16 DALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGH 95 (250)
Q Consensus 16 ~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~g~ 95 (250)
+..|++++||+||++|+++|+|+++....... +.+..++..++++||+++.+.+|+++++||||+|||||+++++.|+
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~--~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~ 80 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGS--KALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGR 80 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccc--cccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCC
Confidence 46788899999999999999999975432221 2234578889999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHhhhHHHHHHHHHHHhCCC----------cccceeccCC-CchhHHHHHHHHHHHHHHHHHHHhccCC
Q 025600 96 ITFVRSILYWIAQLLGSVVACLLLKFSTGGL----------ETSAFALSSG-VGAWNAVVFEIVMTFGLVYTVYATAVDP 164 (250)
Q Consensus 96 ~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~----------~~~~~~~~~~-~~~~~~~~~E~~~T~~l~~~v~~~~~~~ 164 (250)
++|+|++.||++|++|+++|+.+++.++.+. ....+++.|+ .+..++++.|+++|++|++.++....|+
T Consensus 81 fp~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~ 160 (241)
T COG0580 81 FPWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDG 160 (241)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999887531 1234555554 3678999999999999999999954443
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc---------CCCceeecchhHHHHHHHHHHHHHHH
Q 025600 165 KRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW---------TWDNHWVYWLGPFIGAAIAAIAYTVA 235 (250)
Q Consensus 165 ~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~---------~~~~~~vy~~ap~~Ga~~a~~~~~~l 235 (250)
+. +....|+.||+.+..++++.++.||.++|||||+|||+... ++.|.|+||++|++|+++++++|+.+
T Consensus 161 ~~--~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~ 238 (241)
T COG0580 161 NA--NAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLL 238 (241)
T ss_pred cc--cccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHH
Confidence 33 33479999999999999999999999999999999999542 23589999999999999999999987
Q ss_pred hc
Q 025600 236 FI 237 (250)
Q Consensus 236 ~~ 237 (250)
+.
T Consensus 239 ~~ 240 (241)
T COG0580 239 LG 240 (241)
T ss_pred cc
Confidence 64
No 12
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=3.9e-47 Score=321.95 Aligned_cols=214 Identities=29% Similarity=0.517 Sum_probs=180.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHhcCCC
Q 025600 18 LRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHIT 97 (250)
Q Consensus 18 ~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~g~~~ 97 (250)
+|++++||+||++++|+++++.....+.. .++.+++.+++.+|+++...+++++++||+|+|||||++.++.|+++
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~----~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~ 77 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFP----ELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFP 77 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccC----CCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCC
Confidence 68999999999999999998874321111 11235777899999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHhhhHHHHHHHHHHHhCCCcc---c--ce------ecc-CCCchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 025600 98 FVRSILYWIAQLLGSVVACLLLKFSTGGLET---S--AF------ALS-SGVGAWNAVVFEIVMTFGLVYTVYATAVDPK 165 (250)
Q Consensus 98 ~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~---~--~~------~~~-~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~ 165 (250)
|++.+.|+++|++|+++|+.+++.++++... . .+ ... ...+..++++.|+++|++|+++++.. .|++
T Consensus 78 ~~~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~-~~~~ 156 (231)
T PRK05420 78 AKELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGA-TDKR 156 (231)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence 9999999999999999999999988754211 0 01 111 23477899999999999999999984 6655
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCC--CceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 166 RGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTW--DNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 166 ~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~--~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
+. ....|+.+|+.+....+..+++||++|||||||+|++++++| +++|+||++|++|+++++++|++++.+
T Consensus 157 ~~--~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 229 (231)
T PRK05420 157 AP--AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEK 229 (231)
T ss_pred CC--CcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhcc
Confidence 42 246899999999999999999999999999999999998766 589999999999999999999998765
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=2e-44 Score=311.03 Aligned_cols=219 Identities=28% Similarity=0.456 Sum_probs=186.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHh
Q 025600 14 QPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVG 93 (250)
Q Consensus 14 ~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~ 93 (250)
+.+.+|.+++||+||++++|+++++..... ..+ ...+++.+++.+|+++.+.+++++++||+|+|||+|++.++.
T Consensus 41 ~~~~~~~~laEfigTfllvf~~~g~~~~~~-~~~----~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~ 115 (274)
T PLN00183 41 DLNPARMVLAEMVGTFILMFCVCGIIASTQ-LSG----GEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATF 115 (274)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccC----CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHh
Confidence 356679999999999999999998775321 111 113567788999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCcccceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchh
Q 025600 94 GHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIA 173 (250)
Q Consensus 94 g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~ 173 (250)
|+++|.+.+.|+++|++|+++|+.+++.+++... ....+.+..+.+++++.|+++|+++++.++.. .++++. .+...
T Consensus 116 g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~-~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~-~~~~~~-~~~~~ 192 (274)
T PLN00183 116 GHFPWSKVPLYITAQTVGSVLATYVGVSVYGVKA-DLMTTKPAQGCSSAFWVEFIATFIVMFLAASL-TSQPQS-LGHLS 192 (274)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCcccHHHHHHHHHHHHHHHHHhhhee-eccccC-CCCce
Confidence 9999999999999999999999999988886432 23344455677899999999999999998874 443322 22357
Q ss_pred HHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCCCceeecchhHHHHHHHHHHHHHHHhcCCC
Q 025600 174 PIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYTVAFICPN 240 (250)
Q Consensus 174 ~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~~~ 240 (250)
++.+|+.+++.+++.+++||+++||||+|++++.+.+|+++|+||++|++|+++++++||.++.+..
T Consensus 193 ~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~~~~~~~wvy~vapilGailaa~l~~~l~~~~~ 259 (274)
T PLN00183 193 GFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRLRTQ 259 (274)
T ss_pred ehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhCCChhheehHHHHHHHHHHHHHHHHHHHhccCC
Confidence 8999999999999999999999999999999999989999999999999999999999999986643
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=3.5e-43 Score=298.29 Aligned_cols=212 Identities=45% Similarity=0.713 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHhcCCCc
Q 025600 19 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITF 98 (250)
Q Consensus 19 r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 98 (250)
|++++||+||+++++.++++..... ..++ .+.+++.+++.+|+++...+++++++||+|+|||+|++.++.|+++|
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~-~~~~---~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~ 76 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVK-LAGG---ASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPL 76 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhcc-ccCC---CCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCH
Confidence 6789999999999999998875432 1111 12356788999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHHHhCCC----ccc------ce--eccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 025600 99 VRSILYWIAQLLGSVVACLLLKFSTGGL----ETS------AF--ALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 166 (250)
Q Consensus 99 ~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~----~~~------~~--~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~ 166 (250)
++.+.|+++|++|+++|+.+.+.++++. +.. .+ .+.++.+..++++.|+++|+++++.++.. .++++
T Consensus 77 ~~~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~-~~~~~ 155 (228)
T cd00333 77 IRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFAT-TDDPN 155 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHH-ccccc
Confidence 9999999999999999999998887531 111 11 23456688999999999999999999985 45443
Q ss_pred C-CCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccC---CCceeecchhHHHHHHHHHHHHHHH
Q 025600 167 G-NIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWT---WDNHWVYWLGPFIGAAIAAIAYTVA 235 (250)
Q Consensus 167 ~-~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~---~~~~~vy~~ap~~Ga~~a~~~~~~l 235 (250)
. ......++.+|+.+.+.++..+++||+++|||||+++++.++. |+++|+||++|++|+++++++|+++
T Consensus 156 ~~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 156 GPPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 2 2334689999999999999999999999999999999999875 9999999999999999999999863
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=3.4e-42 Score=289.98 Aligned_cols=209 Identities=37% Similarity=0.613 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHhcCCCchhHH
Q 025600 23 AEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSI 102 (250)
Q Consensus 23 ~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~ 102 (250)
+||+||++++|+++++..............+.++..+++.+|+++...++.++++||+|+|||+|++.++.|+++|++.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 59999999999999987643221100111112577889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCCCc---ccce-eccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCC-CCCchhHHHH
Q 025600 103 LYWIAQLLGSVVACLLLKFSTGGLE---TSAF-ALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRG-NIGIIAPIAI 177 (250)
Q Consensus 103 ~yi~aQ~~Ga~~g~~l~~~~~~~~~---~~~~-~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~-~~~~~~~~~i 177 (250)
.|+++|++|+++|+.+.+.++++.. .... ...++.+.+++++.|+++|++++++++.. .++++. ..+...++.+
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~-~~~~~~~~~~~~~~~~i 159 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFAT-TDPRNRVPRGGFAPLAI 159 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHhee-ecCCCCCCCCccHHHHH
Confidence 9999999999999999998886531 1111 12345688999999999999999999984 554433 2223689999
Q ss_pred HHHHHHHHHHhcCCCCCccChhhhHHHHHccc--CCCceeecchhHHHHHHHHHHHH
Q 025600 178 GFIVGANILAGGAFDGASMNPAVSFGPAVVSW--TWDNHWVYWLGPFIGAAIAAIAY 232 (250)
Q Consensus 178 g~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~--~~~~~~vy~~ap~~Ga~~a~~~~ 232 (250)
|+.+...++..+++||+++|||||+++++.++ +|+++|+||++|++|+++++++|
T Consensus 160 G~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 160 GLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999987 89999999999999999999875
No 16
>PLN00026 aquaporin NIP; Provisional
Probab=99.68 E-value=1e-16 Score=139.89 Aligned_cols=105 Identities=21% Similarity=0.280 Sum_probs=87.1
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHhccCCCC-CCCCch--hHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-
Q 025600 134 SSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR-GNIGII--APIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW- 209 (250)
Q Consensus 134 ~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~-~~~~~~--~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~- 209 (250)
.++.+.++.++.|+++|++|+++++.....+++ ...... .++.+|+++++.+++.+++||+|+||||++++++.++
T Consensus 65 ~~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~ 144 (298)
T PLN00026 65 PPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHF 144 (298)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCC
Confidence 345678899999999999999999864332221 111122 3578999999999999999999999999999999876
Q ss_pred CCCceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 210 TWDNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 210 ~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
.|.+.|+||++|++|+++|+++++.++.+
T Consensus 145 ~~~~~~~YiiaQilGAi~aa~~~~~~~~~ 173 (298)
T PLN00026 145 PWKHVPAYIAAQVSASICASFALKGVFHP 173 (298)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 79999999999999999999999988865
No 17
>PLN00184 aquaporin NIP1; Provisional
Probab=99.67 E-value=2.4e-16 Score=137.82 Aligned_cols=103 Identities=25% Similarity=0.312 Sum_probs=85.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHhccC-CCCCCCCch--hHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CC
Q 025600 136 GVGAWNAVVFEIVMTFGLVYTVYATAVD-PKRGNIGII--APIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TW 211 (250)
Q Consensus 136 ~~~~~~~~~~E~~~T~~l~~~v~~~~~~-~~~~~~~~~--~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~ 211 (250)
+.+.++.++.|+++|++|+++++..+.. ..+...... .++.+|+.+++.+++.+++||+|+||||++++++.+. .|
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~ 129 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPL 129 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCH
Confidence 3457799999999999999999875322 111111123 4566699999999999999999999999999999887 89
Q ss_pred CceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 212 DNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 212 ~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
.+.|+||++|++|+++|+++++.++..
T Consensus 130 ~~~~~YiiaQllGA~lga~~~~~l~~~ 156 (296)
T PLN00184 130 KQVPAYVISQVIGSTLAAATLRLLFGL 156 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999988854
No 18
>PLN00167 aquaporin TIP5; Provisional
Probab=99.61 E-value=4.4e-15 Score=127.69 Aligned_cols=103 Identities=22% Similarity=0.416 Sum_probs=86.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHhccCCCC----CC---C-CchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHc
Q 025600 136 GVGAWNAVVFEIVMTFGLVYTVYATAVDPKR----GN---I-GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 207 (250)
Q Consensus 136 ~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~----~~---~-~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~ 207 (250)
.-+.++.++.|+++|+++++..+....+.+. .. . ....++.+|+.+.+.+++.+++||+|+|||+++++.+.
T Consensus 18 ~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~ 97 (256)
T PLN00167 18 TRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVG 97 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHh
Confidence 3456789999999999999999886443221 11 1 12478999999999999999999999999999999998
Q ss_pred cc-CCCceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 208 SW-TWDNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 208 ~~-~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
++ .|.+.|+||++|++|+++++.+++.++..
T Consensus 98 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 98 GHISVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred CCCcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 76 68999999999999999999999887654
No 19
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.58 E-value=4.2e-15 Score=128.76 Aligned_cols=103 Identities=20% Similarity=0.331 Sum_probs=85.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHhccCCCCCC--CCc-hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CC
Q 025600 136 GVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGN--IGI-IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TW 211 (250)
Q Consensus 136 ~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~--~~~-~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~ 211 (250)
+.+.++.++.|+++|+++++..+....+++... .+. ..++.+|+.+.+.+++.+++||+|+||||++++++.++ .|
T Consensus 41 ~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~i~~ 120 (274)
T PLN00183 41 DLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGHFPW 120 (274)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcCCCH
Confidence 346789999999999999999987543322211 121 14678999999999999999999999999999999976 79
Q ss_pred CceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 212 DNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 212 ~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
.+.|+||++|++|+++|+.+++.++..
T Consensus 121 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~ 147 (274)
T PLN00183 121 SKVPLYITAQTVGSVLATYVGVSVYGV 147 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999888754
No 20
>PLN00166 aquaporin TIP2; Provisional
Probab=99.58 E-value=7.7e-15 Score=125.81 Aligned_cols=102 Identities=22% Similarity=0.364 Sum_probs=84.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhccCC-C--C-C---CCCc-hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcc
Q 025600 137 VGAWNAVVFEIVMTFGLVYTVYATAVDP-K--R-G---NIGI-IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVS 208 (250)
Q Consensus 137 ~~~~~~~~~E~~~T~~l~~~v~~~~~~~-~--~-~---~~~~-~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~ 208 (250)
.+..++++.|+++|++++++.+....+. + + . ..+. ..++.+|+.+++.+++.+++||+|+||||++++.+.+
T Consensus 15 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g 94 (250)
T PLN00166 15 VASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGG 94 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhC
Confidence 4667899999999999999998864331 1 1 1 1111 3567799999999999999999999999999999976
Q ss_pred c-CCCceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 209 W-TWDNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 209 ~-~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
+ +|.+.|+||++|++|+++++.+++.++.+
T Consensus 95 ~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~ 125 (250)
T PLN00166 95 NITIITGFFYWIAQCLGSIVACLLLVFVTNG 125 (250)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 5 68899999999999999999999988654
No 21
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.56 E-value=9.6e-15 Score=127.00 Aligned_cols=102 Identities=21% Similarity=0.275 Sum_probs=84.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhccCCCCC-CCCch--hHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CCC
Q 025600 137 VGAWNAVVFEIVMTFGLVYTVYATAVDPKRG-NIGII--APIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWD 212 (250)
Q Consensus 137 ~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~-~~~~~--~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~~ 212 (250)
.+.++.++.|+++|++|++..+..+...+.. ..... ..+.+|+.+.+.+++.+++||+|+|||++++.++.++ .|.
T Consensus 39 ~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~~ 118 (283)
T PLN00182 39 VCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWY 118 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCHH
Confidence 4567899999999999999988754332211 11112 3558899999999999999999999999999999987 899
Q ss_pred ceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 213 NHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 213 ~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
+.|+||++|++|+++|+++.+.++..
T Consensus 119 ~~~~Yi~aQ~lGa~~ga~~~~~~~~~ 144 (283)
T PLN00182 119 QVPLYIGAQLTGSLLASLTLRLMFNV 144 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999888743
No 22
>PRK05420 aquaporin Z; Provisional
Probab=99.55 E-value=2.3e-14 Score=121.73 Aligned_cols=99 Identities=25% Similarity=0.247 Sum_probs=81.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCC-CC--CCCc-hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CCCce
Q 025600 140 WNAVVFEIVMTFGLVYTVYATAVDPK-RG--NIGI-IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDNH 214 (250)
Q Consensus 140 ~~~~~~E~~~T~~l~~~v~~~~~~~~-~~--~~~~-~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~~~~ 214 (250)
.+.++.|+++|+++++..+......+ .+ ..+. ..++.+|+.+.+.+++.+++||+|+|||+++++.+.+. +|.+.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 57899999999999998877432211 11 1112 24789999999999999999999999999999999876 79999
Q ss_pred eecchhHHHHHHHHHHHHHHHhcC
Q 025600 215 WVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 215 ~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
|+||++|++|+++++.+.+.++++
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~ 105 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASG 105 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999887777654
No 23
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.54 E-value=1.1e-14 Score=123.74 Aligned_cols=98 Identities=23% Similarity=0.270 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCC---CC-chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CCCcee
Q 025600 141 NAVVFEIVMTFGLVYTVYATAVDPKRGN---IG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDNHW 215 (250)
Q Consensus 141 ~~~~~E~~~T~~l~~~v~~~~~~~~~~~---~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~~~~~ 215 (250)
|.++.|+++|+++++..+....+++..+ .+ ...++.+|+.+...++..+++||+|+|||+++++.+.++ +|.+.|
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~ 80 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHH
Confidence 4578999999999999988654433211 11 246889999999999999999999999999999999876 699999
Q ss_pred ecchhHHHHHHHHHHHHHHHhcC
Q 025600 216 VYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 216 vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
+||++|++|+++++.+++.++.+
T Consensus 81 ~y~~aq~~Ga~~~~~~~~~~~~~ 103 (228)
T cd00333 81 PYIIAQLLGAILGAALLYGLYYG 103 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999998888765
No 24
>PLN00027 aquaporin TIP; Provisional
Probab=99.53 E-value=3e-14 Score=122.53 Aligned_cols=101 Identities=22% Similarity=0.371 Sum_probs=82.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccC------CCCC-CCC-chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc
Q 025600 138 GAWNAVVFEIVMTFGLVYTVYATAVD------PKRG-NIG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW 209 (250)
Q Consensus 138 ~~~~~~~~E~~~T~~l~~~v~~~~~~------~~~~-~~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~ 209 (250)
..++.++.|+++|++++++.+..... +++. ..+ ...++.+|+.+.+.+++.+++||+|+||||++++.+.++
T Consensus 18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~ 97 (252)
T PLN00027 18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGN 97 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCC
Confidence 45788999999999999998875321 1111 111 146899999999999999999999999999999998765
Q ss_pred -CCCceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 210 -TWDNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 210 -~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
.|.+.|+||++|++|+++++.+++.+...
T Consensus 98 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 127 (252)
T PLN00027 98 ITLLRGILYWIAQLLGSVVACLLLKFSTGG 127 (252)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 68889999999999999999999877643
No 25
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.52 E-value=3.1e-14 Score=124.77 Aligned_cols=101 Identities=24% Similarity=0.341 Sum_probs=84.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccCCCC-C-CCC-chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CCCc
Q 025600 138 GAWNAVVFEIVMTFGLVYTVYATAVDPKR-G-NIG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDN 213 (250)
Q Consensus 138 ~~~~~~~~E~~~T~~l~~~v~~~~~~~~~-~-~~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~~~ 213 (250)
+..+.++.|+++|++++++.++...+... . ..+ ...++.+|+.+.+.+++.+++||+|+|||+++++++.++ .|.+
T Consensus 48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~ 127 (294)
T PTZ00016 48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKK 127 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHH
Confidence 45689999999999999988875332211 1 111 235678899999999999999999999999999999987 7999
Q ss_pred eeecchhHHHHHHHHHHHHHHHhcC
Q 025600 214 HWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 214 ~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
.|.||++|++|+++|+.+.+.++++
T Consensus 128 ~~~YiiaQ~lGa~~ga~ll~~~~~~ 152 (294)
T PTZ00016 128 LPGYFVAQLLGAFVGAACVYGLYYG 152 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999998887754
No 26
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.44 E-value=1.5e-13 Score=115.96 Aligned_cols=101 Identities=24% Similarity=0.273 Sum_probs=82.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccC---CC--CCCCC-chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-C
Q 025600 138 GAWNAVVFEIVMTFGLVYTVYATAVD---PK--RGNIG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-T 210 (250)
Q Consensus 138 ~~~~~~~~E~~~T~~l~~~v~~~~~~---~~--~~~~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~ 210 (250)
+..+.++.|+++|++|++........ ++ +...+ ....+.+|+.|.+.+++.+++||+|+|||++++.++.++ +
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 44567899999999999976553221 11 11112 236788999999999999999999999999999999887 7
Q ss_pred CCceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 211 WDNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 211 ~~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
|++...|+++|++|+++++.+...++++
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~ 110 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYG 110 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999888888776
No 27
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.43 E-value=2.4e-13 Score=114.57 Aligned_cols=94 Identities=24% Similarity=0.275 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHhccCC--CC--CCC----CchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CCCcee
Q 025600 145 FEIVMTFGLVYTVYATAVDP--KR--GNI----GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDNHW 215 (250)
Q Consensus 145 ~E~~~T~~l~~~v~~~~~~~--~~--~~~----~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~~~~~ 215 (250)
.|+++|+++++..+....+. ++ +.. ....++.+|+.+...+++.+++||+|+|||+++++.+.++ +|.+.|
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 49999999999998865441 11 111 1246889999999999999999999999999999999987 799999
Q ss_pred ecchhHHHHHHHHHHHHHHHhcC
Q 025600 216 VYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 216 vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
+||++|++|+++++.+++.++.+
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~ 103 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSG 103 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999988765
No 28
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.42 E-value=2.5e-13 Score=116.35 Aligned_cols=101 Identities=27% Similarity=0.385 Sum_probs=83.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccCC--CCCCCC--chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CCC
Q 025600 138 GAWNAVVFEIVMTFGLVYTVYATAVDP--KRGNIG--IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWD 212 (250)
Q Consensus 138 ~~~~~~~~E~~~T~~l~~~v~~~~~~~--~~~~~~--~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~~ 212 (250)
...|.+++||++|++|++.-++..... .+.+.+ ....+.+|+.++..++..+.+||+|+|||++++..+.++ .|.
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~ 109 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWK 109 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChh
Confidence 567899999999999998776642221 111112 234688999999999999999999999999999999987 899
Q ss_pred ceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 213 NHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 213 ~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
++.+|.++|++||++++.....+|++
T Consensus 110 k~p~Y~~aQ~iGAF~gaa~~y~~y~d 135 (316)
T KOG0224|consen 110 KFPVYVLAQFIGAFLGAATVYGLYYD 135 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887777665
No 29
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.36 E-value=2.5e-12 Score=108.90 Aligned_cols=103 Identities=25% Similarity=0.312 Sum_probs=87.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHhccCCC--CCCCC-chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CC
Q 025600 136 GVGAWNAVVFEIVMTFGLVYTVYATAVDPK--RGNIG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TW 211 (250)
Q Consensus 136 ~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~--~~~~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~ 211 (250)
..+.+|+++.||++|+++++..+..+...+ ....+ ....+..|+.+++.+++.+++||+|+|||.+++..+.++ .+
T Consensus 7 ~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~isl 86 (238)
T KOG0223|consen 7 SVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGKISL 86 (238)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCCCcH
Confidence 346789999999999999999888654333 11221 235688899999999999999999999999999999887 68
Q ss_pred CceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 212 DNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 212 ~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
.+...||++|++|+++++.+.+.+.+.
T Consensus 87 ~~~~~Y~vaQ~lGa~~g~~~l~~~~~~ 113 (238)
T KOG0223|consen 87 FRAVAYIVAQLLGAIAGAALLKVVTPG 113 (238)
T ss_pred HHhHHHHHHHHHHHHHHHHHHheecCc
Confidence 889999999999999999999988877
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.29 E-value=3.1e-12 Score=108.47 Aligned_cols=102 Identities=26% Similarity=0.419 Sum_probs=81.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhcc--CCCCCC-----CCc--hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHc
Q 025600 137 VGAWNAVVFEIVMTFGLVYTVYATAV--DPKRGN-----IGI--IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 207 (250)
Q Consensus 137 ~~~~~~~~~E~~~T~~l~~~v~~~~~--~~~~~~-----~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~ 207 (250)
.+.+|.++.|+++|+++++....... ++...+ ... ...+..|+.+...++..++.||+|+|||.+++..+.
T Consensus 5 ~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~ 84 (227)
T PF00230_consen 5 PSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFALT 84 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhheeee
Confidence 36789999999999999987766322 222111 111 244567889999999999999999999999999998
Q ss_pred cc-CCCceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 208 SW-TWDNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 208 ~~-~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
++ +|.+..+|+++|++|+++|+.+.+.++++
T Consensus 85 g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~ 116 (227)
T PF00230_consen 85 GRISWKKAIVYIIAQFLGAFLGALLVYALYPD 116 (227)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTH
T ss_pred eeecccceeeEEeeccccccccccchhhcccC
Confidence 76 78899999999999999999998888766
No 31
>PRK11562 nitrite transporter NirC; Provisional
Probab=89.13 E-value=12 Score=32.69 Aligned_cols=173 Identities=13% Similarity=0.140 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHHhcc-ccccccchHHHHHHHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhC---CCccc---
Q 025600 57 VSASIAHAFALFVAVSVGAN-ISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTG---GLETS--- 129 (250)
Q Consensus 57 ~~~a~~~g~~l~~~i~~~~~-iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~---~~~~~--- 129 (250)
+..+..+++++.+.+..-+. .+| |=.....-.+.||.++++.+-.+.-=.+|=++|+++.-++.. +...+
T Consensus 59 li~g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~ 135 (268)
T PRK11562 59 LVMGATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDT 135 (268)
T ss_pred HHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 33455666666666654332 122 444444556788999999887777777777777766554431 10000
Q ss_pred ce-----eccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHH
Q 025600 130 AF-----ALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGP 204 (250)
Q Consensus 130 ~~-----~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~ 204 (250)
.. ...-+.+..+.|+-=.++-++..+.+... ...+ ..+....+. +.+++.+. ..+.=...|=- -+..
T Consensus 136 ~~~~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~-~~~~--~~gKi~~i~--~pI~~Fv~--~GFEH~IANm~-~~~l 207 (268)
T PRK11562 136 SIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMA-IRTE--GAAKFIAIW--WCLLAFIA--SGYEHSVANMT-LFAL 207 (268)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH-Hhcc--ccchhHHHH--HHHHHHHH--cCCcchhHhHH-HHHH
Confidence 00 00112356666777777777777777653 2222 122222222 22222222 22222333411 2222
Q ss_pred HHccc-----CC----CceeecchhHHHHH-HHHHHHHHHHhcCCC
Q 025600 205 AVVSW-----TW----DNHWVYWLGPFIGA-AIAAIAYTVAFICPN 240 (250)
Q Consensus 205 ~~~~~-----~~----~~~~vy~~ap~~Ga-~~a~~~~~~l~~~~~ 240 (250)
.+... .| ++.-+-.+|-++|+ ++-++.|++.+.+++
T Consensus 208 ~~~~~~~~~~~~~~~~~nlipvtLGNivGG~v~vg~~y~~~~~~~~ 253 (268)
T PRK11562 208 SWFGHHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKAN 253 (268)
T ss_pred HHHccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 22221 11 12234467888887 566677887776533
No 32
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=78.77 E-value=26 Score=30.11 Aligned_cols=139 Identities=12% Similarity=0.171 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHhcCC
Q 025600 17 ALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHI 96 (250)
Q Consensus 17 ~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~g~~ 96 (250)
..|.++.-+++-+.+-+.+........... +.+++...+..++.+.+++...+..-+..- -=|-......++.||.
T Consensus 20 ~~~~~~~~~lAG~~ig~g~~~~~~v~~~~~--~~~~g~~~l~~g~~F~~Gl~lIv~~g~eLf--Tgn~~~~~~~~~~~~~ 95 (250)
T PF01226_consen 20 PSKLFLRGILAGAFIGFGALLSLVVAAGFG--AENPGLAKLVGGLVFPIGLVLIVFLGGELF--TGNMMVMTLALLNKRI 95 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCT--TSTHHHHHHHHHHHHTHHHHHHHHHT---T--TTTCHHHHHHHCTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--cCCccHHHHHHHHHHHHHHHHHHHhcchhc--ccchHHHHHHHHcCCC
Confidence 344444445555444444433332222221 111223345556666677666665433321 1266766667789999
Q ss_pred CchhHHHHHHHHhhhHHHHHHHHHHHhCC----Cccc--------ceeccCCCchhHHHHHHHHHHHHHHHHHHH
Q 025600 97 TFVRSILYWIAQLLGSVVACLLLKFSTGG----LETS--------AFALSSGVGAWNAVVFEIVMTFGLVYTVYA 159 (250)
Q Consensus 97 ~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~----~~~~--------~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~ 159 (250)
+|++.+--+.-=.+|=++|+.+.-++... .+.+ .....-+.+.++.|+-=.++-++..+.++.
T Consensus 96 ~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~ 170 (250)
T PF01226_consen 96 SWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPAMGEYLISVAEHKVSHTFWELFFRGILCNWLVCLAVWL 170 (250)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTHHHHHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99998877777777777777765554321 1000 001112346777777778888888888776
No 33
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=74.85 E-value=57 Score=28.40 Aligned_cols=175 Identities=15% Similarity=0.268 Sum_probs=92.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhccc-cccccchHHHHHHHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhC--C---Ccc
Q 025600 55 GLVSASIAHAFALFVAVSVGANI-SGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTG--G---LET 128 (250)
Q Consensus 55 ~~~~~a~~~g~~l~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~--~---~~~ 128 (250)
..+.-++.+++++...++.-+.. +| |=-....-...|+++|++.+--+.-=.+|=++|+.++.++.. + ...
T Consensus 63 ~~lvg~~~F~~GLilVv~~g~ELfT~---n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~ 139 (265)
T COG2116 63 AKLVGGLVFSLGLILVVIAGSELFTS---NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTAN 139 (265)
T ss_pred HHHHHHHHHHHHHHHhhhhCcccccc---chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 45666777777777777654432 11 333333445689999999888888777888888777665541 1 111
Q ss_pred cce-----e---ccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhh
Q 025600 129 SAF-----A---LSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAV 200 (250)
Q Consensus 129 ~~~-----~---~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~ 200 (250)
+.+ . -.-+.+..+.|.--.++-.+..++++.. ...|... +. .+.+..-+..+....+.=...|-..
T Consensus 140 ~~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~-~~~k~~~-~K----~~~m~~pv~~Fv~~GfeH~VANm~~ 213 (265)
T COG2116 140 GQWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMS-YSAKDGA-AK----IFAIILPVMLFVASGFEHSVANMFM 213 (265)
T ss_pred chhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHH-hcccchh-hH----HHHHHHHHHHHHHcCCceeeehHHH
Confidence 111 0 0112345667777777777777777763 3222211 11 1222223333344444445556333
Q ss_pred hHHHHHccc--CCCc-ee----ecchhHHHHH-HHHHHHHHHHhcC
Q 025600 201 SFGPAVVSW--TWDN-HW----VYWLGPFIGA-AIAAIAYTVAFIC 238 (250)
Q Consensus 201 ~l~~~~~~~--~~~~-~~----vy~~ap~~Ga-~~a~~~~~~l~~~ 238 (250)
-.-.+...+ .|.+ .| .-.+|.++|+ ++-++.|++++.+
T Consensus 214 i~~~~~~~~~~~~~~fi~~Nlipv~lGNivGG~v~vgl~Y~~~~~~ 259 (265)
T COG2116 214 IPWAAVFSGALTWADFILKNLIPVTLGNIVGGAVFVGLMYWYLYRK 259 (265)
T ss_pred HHHHHHcCChhhhHHHHHHHHHHHHHhchhcchhhhhHHHHHhccc
Confidence 222233332 4544 22 2234555544 5556777777655
No 34
>PRK10805 formate transporter; Provisional
Probab=74.56 E-value=60 Score=28.54 Aligned_cols=100 Identities=18% Similarity=0.325 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHHHHHHHhcc-ccccccchHHHHHHHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHh---CCC--ccc
Q 025600 56 LVSASIAHAFALFVAVSVGAN-ISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFST---GGL--ETS 129 (250)
Q Consensus 56 ~~~~a~~~g~~l~~~i~~~~~-iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~---~~~--~~~ 129 (250)
.+..++.+.+++...+..-+. .+| |-..+++ .+.||.++++.+-.+.-=.+|=++|+++.-++. +.. ..+
T Consensus 68 ~ll~~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~ 143 (285)
T PRK10805 68 KLVGGICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANG 143 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCcc
Confidence 344456666666666654433 234 6555544 678999999988555555555555555443322 100 000
Q ss_pred ce--------eccCCCchhHHHHHHHHHHHHHHHHHHH
Q 025600 130 AF--------ALSSGVGAWNAVVFEIVMTFGLVYTVYA 159 (250)
Q Consensus 130 ~~--------~~~~~~~~~~~~~~E~~~T~~l~~~v~~ 159 (250)
.. ...-+.+.++.|+-=.++-++..+.++.
T Consensus 144 ~~~~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~ 181 (285)
T PRK10805 144 QWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWM 181 (285)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0111345667777777777777777765
No 35
>PRK09713 focB putative formate transporter; Provisional
Probab=64.91 E-value=98 Score=27.17 Aligned_cols=101 Identities=10% Similarity=0.121 Sum_probs=54.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhccc-cccccchHHHHHHHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhC--CC---cc
Q 025600 55 GLVSASIAHAFALFVAVSVGANI-SGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTG--GL---ET 128 (250)
Q Consensus 55 ~~~~~a~~~g~~l~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~--~~---~~ 128 (250)
..+..++.+.+++.+.+..-+.. +| |=... .-...||.+|++.+-.+.-=.+|=++|+++.-++.. +. ..
T Consensus 66 ~~ll~g~~F~vGLilIv~~g~ELfTg---N~~~~-~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~ 141 (282)
T PRK09713 66 THLVGGLCFTLGFILLAVCGTSLFTS---SVMTV-MAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSEN 141 (282)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccHH---HHHHH-HHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 33444666667776666544332 22 32222 335689999999885544444555555444333221 00 00
Q ss_pred cc--------eeccCCCchhHHHHHHHHHHHHHHHHHHH
Q 025600 129 SA--------FALSSGVGAWNAVVFEIVMTFGLVYTVYA 159 (250)
Q Consensus 129 ~~--------~~~~~~~~~~~~~~~E~~~T~~l~~~v~~ 159 (250)
.. ....-+.+.++.|+--.++-++..++++.
T Consensus 142 ~~~~~~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~ 180 (282)
T PRK09713 142 AMWGVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWM 180 (282)
T ss_pred hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00112346777888888888888888776
No 36
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=46.49 E-value=8.2 Score=29.13 Aligned_cols=18 Identities=22% Similarity=0.423 Sum_probs=15.9
Q ss_pred cccccchHHHHHHHHhcC
Q 025600 78 SGGHVNPAVTFGAFVGGH 95 (250)
Q Consensus 78 SGah~NPavTla~~l~g~ 95 (250)
|+||+||.+.++..+.++
T Consensus 8 t~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRR 25 (139)
T ss_dssp SHHHHHHHHHHHHHHHHT
T ss_pred ChhHHHHHHHHHHHHhcc
Confidence 689999999999999655
No 37
>PF09512 ThiW: Thiamine-precursor transporter protein (ThiW); InterPro: IPR012652 Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.
Probab=29.70 E-value=2.4e+02 Score=22.34 Aligned_cols=26 Identities=27% Similarity=0.487 Sum_probs=18.6
Q ss_pred chhHHHHHHHHhhhHHHHHHHHHHHh
Q 025600 98 FVRSILYWIAQLLGSVVACLLLKFST 123 (250)
Q Consensus 98 ~~~~~~yi~aQ~~Ga~~g~~l~~~~~ 123 (250)
+...+.+..+-+.|+++|..+.+.+.
T Consensus 123 ~~~v~~F~~St~~Ga~ig~~~l~~L~ 148 (150)
T PF09512_consen 123 FFFVPPFLISTLIGAIIGYILLKALK 148 (150)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55566777778888888877776553
No 38
>PRK14218 camphor resistance protein CrcB; Provisional
Probab=29.57 E-value=2.6e+02 Score=21.48 Aligned_cols=116 Identities=16% Similarity=0.100 Sum_probs=59.4
Q ss_pred chhHHHHHHHHhhhHHHHHHHHHHHhCCCcccceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHH
Q 025600 98 FVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGIIAPIAI 177 (250)
Q Consensus 98 ~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~~i 177 (250)
|++...++ .+|+.+|+.+-+.+..-.. ... .+. -++..+..-.+++|++-+..-. ..+ +...+ .+...
T Consensus 6 ~~~~~l~V---~~GG~~Ga~lRy~l~~~~~-~~~--~~~-fP~gTl~VNv~GsfllG~l~~~-~~~-~~~~~---~~~~~ 73 (133)
T PRK14218 6 WWQSLLLV---MLGGAFGSGLRFVIGSCLL-QRF--GAG-FPWGTLAVNLIGSFVAGFLLIW-LDK-RGSAG---WPWRM 73 (133)
T ss_pred HHHHHHHH---HHHHHHHHHHHHHHHHHHH-Hhc--CCC-CcHHHHHHHHHHHHHHHHHHHH-HHh-ccCCC---HHHHH
Confidence 55555443 3888999888766542100 000 111 2356788999999998665432 122 22111 11222
Q ss_pred HHHHHHHHHHhcCCCCCccChhhhHHHHH----cccCCCceeecchhHHHHHHHHHHHHHH
Q 025600 178 GFIVGANILAGGAFDGASMNPAVSFGPAV----VSWTWDNHWVYWLGPFIGAAIAAIAYTV 234 (250)
Q Consensus 178 g~~v~~~~~~~~~~tG~~lNPA~~l~~~~----~~~~~~~~~vy~~ap~~Ga~~a~~~~~~ 234 (250)
.+.+.. +|.+|-.+ +++... -.++|.....|.+..++++++++.+=..
T Consensus 74 ~l~tGf----lGgfTTFS-----Tf~~E~~~L~~~~~~~~a~~y~~~s~~~gl~a~~lG~~ 125 (133)
T PRK14218 74 LLIVGL----IGGLTTFS-----SLMMECLVFVRSDRSLMVGIYLCITLLFGLLFVFLGAR 125 (133)
T ss_pred HHHHHH----hchhccHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222111 12222110 222222 2345666678999999999988876443
No 39
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=29.24 E-value=17 Score=32.80 Aligned_cols=21 Identities=24% Similarity=0.414 Sum_probs=17.4
Q ss_pred hccccccccchHHHHHHHHhc
Q 025600 74 GANISGGHVNPAVTFGAFVGG 94 (250)
Q Consensus 74 ~~~iSGah~NPavTla~~l~g 94 (250)
.+.=+|||+.||+.++-.+..
T Consensus 7 ~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 7 TGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EcCCcHHHHHHHHHHHHHHHh
Confidence 445589999999999988864
No 40
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=26.25 E-value=4e+02 Score=22.53 Aligned_cols=99 Identities=16% Similarity=0.301 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHHHHHHHHhcccccccc---chHHHHHHHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhC---C--Cc
Q 025600 56 LVSASIAHAFALFVAVSVGANISGGHV---NPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTG---G--LE 127 (250)
Q Consensus 56 ~~~~a~~~g~~l~~~i~~~~~iSGah~---NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~---~--~~ 127 (250)
.+..++.+..++...+. .|+++ |-.....-.+.||.+|++.+-.+.-=.+|=++|+.+.-.+.. . ..
T Consensus 43 ~~l~~~~F~~gl~~Iv~-----~g~eLfTgn~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~ 117 (239)
T TIGR00790 43 KLVGGATFPIGLILVVI-----AGSDLFTGNTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTA 117 (239)
T ss_pred HHHHHHHHHHHHheeee-----eCccccccchHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCC
Confidence 34445555555554443 34444 444444456789999999888777777777777766554431 1 00
Q ss_pred c-cc-------eeccCCCchhHHHHHHHHHHHHHHHHHHH
Q 025600 128 T-SA-------FALSSGVGAWNAVVFEIVMTFGLVYTVYA 159 (250)
Q Consensus 128 ~-~~-------~~~~~~~~~~~~~~~E~~~T~~l~~~v~~ 159 (250)
. +. ....-+.+..+.++-=.++.++..+.+..
T Consensus 118 ~~~~~~~~~~~a~~K~~~~~~~~f~~gilcn~lV~lav~~ 157 (239)
T TIGR00790 118 NGPWGVGSLAIAEHKAHHTFVEAFFLGILCNWLVCLAVWM 157 (239)
T ss_pred ccHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1 00 00112346667777777777777777665
No 41
>TIGR02587 putative integral membrane protein TIGR02587. Members of this family are found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus in a conserved two-gene neighborhood. This family, as defined, includes some members of COG4711 but is narrower and strictly bacterial. Members appear to span the membrane seven times.
Probab=24.30 E-value=2.9e+02 Score=24.09 Aligned_cols=58 Identities=7% Similarity=-0.074 Sum_probs=38.6
Q ss_pred CCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCcccceeccCCCchhHHHHHHHHHHHH
Q 025600 95 HITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFG 152 (250)
Q Consensus 95 ~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~ 152 (250)
+.|+.+.+-+++-|-+=+-.|+.+.+...+++..............+..+.|...|.+
T Consensus 96 ~~pl~e~Lg~vivl~vP~sIGaAlaR~~L~~~~~~~~~~~~~~~~~~~~l~dl~~~~~ 153 (271)
T TIGR02587 96 ETSLKEIVGKVAFQGVPFSLGAALARQQLGDTNQNNSLSEGKQNSEYGYLAELFAMLV 153 (271)
T ss_pred CCCHHHHHHHHHHHhCcHHHHHHHHHHHhCCCcCccccchhhhcchhhhHHHHHHHHH
Confidence 3479999999999999999999999988865432211111122345556666655544
No 42
>COG3301 NrfD Formate-dependent nitrite reductase, membrane component [Inorganic ion transport and metabolism]
Probab=23.57 E-value=5.2e+02 Score=22.89 Aligned_cols=43 Identities=21% Similarity=0.420 Sum_probs=27.5
Q ss_pred CCCccCh---hhhHHHHHcccCCCceeecchhHHHHHHHHHHHHHHHh
Q 025600 192 DGASMNP---AVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYTVAF 236 (250)
Q Consensus 192 tG~~lNP---A~~l~~~~~~~~~~~~~vy~~ap~~Ga~~a~~~~~~l~ 236 (250)
.+.++|| +|++..++.+++| .|++|++-..=+++.-.+.+.-.
T Consensus 223 ~l~~~G~~a~~~a~~~al~gg~~--a~~fwiGV~giGliiplll~~~~ 268 (305)
T COG3301 223 VLLSLGGVAAARALATALAGGFW--AWVFWIGVLGLGLIIPLLLKFGV 268 (305)
T ss_pred HHHHhCcHHHHHHHHHHHhcccH--HHHHHHHHHHHHHHHHHHHhhcc
Confidence 4556666 5778888888888 78888876533345454444433
No 43
>PRK11375 allantoin permease; Provisional
Probab=21.03 E-value=7e+02 Score=23.52 Aligned_cols=22 Identities=23% Similarity=0.362 Sum_probs=17.5
Q ss_pred ecchhHHHHHHHHHHHHHHHhc
Q 025600 216 VYWLGPFIGAAIAAIAYTVAFI 237 (250)
Q Consensus 216 vy~~ap~~Ga~~a~~~~~~l~~ 237 (250)
.|..+.+.|-++++.+|..+.+
T Consensus 449 l~~~~~~~g~iva~~~Y~~l~~ 470 (484)
T PRK11375 449 LSRVSWFVGVIVAFVAYALLKK 470 (484)
T ss_pred HhhhhHHHHHHHHHHHHHHHHh
Confidence 3567888999999999987754
Done!