Query 025600
Match_columns 250
No_of_seqs 171 out of 1533
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 13:38:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025600.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025600hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gd8_A Aquaporin-4; proton exc 100.0 3.8E-55 1.3E-59 368.0 21.8 220 15-238 1-223 (223)
2 3iyz_A Aquaporin-4; water tran 100.0 9.2E-55 3.1E-59 381.6 22.1 222 14-239 48-272 (340)
3 1j4n_A Aquaporin 1; membrane p 100.0 5.6E-54 1.9E-58 370.5 22.5 229 10-239 3-236 (271)
4 2zz9_A Aquaporin-4; water tran 100.0 7.9E-54 2.7E-58 372.7 22.4 226 9-238 4-232 (301)
5 3cn5_A Aquaporin; membrane pro 100.0 1.3E-54 4.5E-59 378.4 17.5 228 8-238 51-289 (304)
6 2w2e_A AQY1, aquaporin, aquapo 100.0 2.1E-53 7.2E-58 367.6 23.9 222 15-238 42-266 (279)
7 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 2.2E-53 7.6E-58 365.4 20.8 222 10-239 4-229 (266)
8 2b6o_A Aquaporin-0, lens fiber 100.0 2.8E-52 9.5E-57 358.5 25.9 222 10-239 2-226 (263)
9 3llq_A Aquaporin Z 2; aquapori 100.0 4.4E-52 1.5E-56 354.5 20.4 217 13-236 25-253 (256)
10 2o9g_A Aquaporin Z; integral m 100.0 8.8E-52 3E-56 350.1 21.6 215 17-238 4-232 (234)
11 2f2b_A Aquaporin AQPM; protein 100.0 3.8E-51 1.3E-55 349.0 22.8 220 16-237 3-245 (246)
12 1ldf_A Glycerol uptake facilit 100.0 1.5E-51 5E-56 357.5 20.4 220 14-239 4-258 (281)
13 3c02_A Aquaglyceroporin; membr 100.0 1.5E-51 5.2E-56 353.4 12.3 219 14-238 6-244 (258)
14 2b6o_A Aquaporin-0, lens fiber 99.6 2.1E-15 7.2E-20 129.2 9.9 101 138-238 8-110 (263)
15 3d9s_A Aquaporin-5, AQP-5; aqu 99.5 1.3E-14 4.4E-19 124.4 7.7 101 138-238 10-112 (266)
16 2f2b_A Aquaporin AQPM; protein 99.5 7.2E-14 2.4E-18 118.7 12.1 101 14-124 140-245 (246)
17 3llq_A Aquaporin Z 2; aquapori 99.5 2.1E-14 7E-19 122.2 7.6 101 138-238 28-133 (256)
18 2zz9_A Aquaporin-4; water tran 99.5 5.1E-14 1.7E-18 122.3 9.8 101 138-238 11-117 (301)
19 2o9g_A Aquaporin Z; integral m 99.5 4.4E-14 1.5E-18 119.1 7.4 100 139-238 4-108 (234)
20 3gd8_A Aquaporin-4; proton exc 99.5 4.9E-14 1.7E-18 117.9 7.2 101 138-238 2-108 (223)
21 3iyz_A Aquaporin-4; water tran 99.5 5E-14 1.7E-18 123.6 6.9 101 138-238 50-156 (340)
22 3c02_A Aquaglyceroporin; membr 99.5 5.3E-14 1.8E-18 120.2 6.2 101 138-238 8-112 (258)
23 1j4n_A Aquaporin 1; membrane p 99.5 9.7E-14 3.3E-18 119.3 7.8 101 138-238 9-120 (271)
24 2w2e_A AQY1, aquaporin, aquapo 99.4 2.6E-13 9E-18 116.9 10.0 101 138-238 43-154 (279)
25 1ldf_A Glycerol uptake facilit 99.4 1.3E-13 4.3E-18 119.3 7.4 101 138-238 6-110 (281)
26 3cn5_A Aquaporin; membrane pro 99.4 1.3E-13 4.6E-18 119.9 7.3 101 138-238 59-166 (304)
27 3kcu_A Probable formate transp 89.2 8.3 0.00028 32.7 12.9 102 56-160 68-182 (285)
28 3tds_E Formate/nitrite transpo 75.9 34 0.0012 28.6 14.6 101 54-159 62-176 (268)
29 3s2u_A UDP-N-acetylglucosamine 47.0 4.9 0.00017 34.8 0.5 19 77-95 11-29 (365)
30 3kly_A Putative formate transp 42.5 1.5E+02 0.0051 24.7 12.1 139 15-159 28-180 (280)
No 1
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-55 Score=368.02 Aligned_cols=220 Identities=35% Similarity=0.610 Sum_probs=193.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHhc
Q 025600 15 PDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGG 94 (250)
Q Consensus 15 ~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~g 94 (250)
++++|++++||+||++|+++|+++++.. .++++.++.+++.++++||+++++.+++++++||||+|||||+++++.|
T Consensus 1 ~~~~r~~~aEfiGT~~lv~~g~g~~~~~---~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g 77 (223)
T 3gd8_A 1 QAFWKAVTAEFLAMLIFVLLSLGSTINW---GGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTR 77 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTCCT---TTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcC
Confidence 4689999999999999999999998643 1122223468999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCc---ccceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCc
Q 025600 95 HITFVRSILYWIAQLLGSVVACLLLKFSTGGLE---TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGI 171 (250)
Q Consensus 95 ~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~ 171 (250)
+++|+|++.|+++|++|+++|+.+++.++++.. ...+.+.++.+..++++.|+++|++|+++++.. .|+++.....
T Consensus 78 ~~~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~-~~~~~~~~~~ 156 (223)
T 3gd8_A 78 KISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFAS-CDSKRTDVTG 156 (223)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-TCTTCSCCCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHH-hccccCCccC
Confidence 999999999999999999999999999886431 234556677899999999999999999999984 6666544445
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCCCceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 172 IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 172 ~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
..|+.||+.+...+..++++||+++||||||+||++.++|+++|+||++|++|+++++++|++++.|
T Consensus 157 ~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 157 SIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 6899999999888888888999999999999999999999999999999999999999999998754
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=9.2e-55 Score=381.56 Aligned_cols=222 Identities=35% Similarity=0.611 Sum_probs=194.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHh
Q 025600 14 QPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVG 93 (250)
Q Consensus 14 ~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~ 93 (250)
+++++|++++||+||++|+|+|+|+++.. ..++...+.+++.++++||+++++++++++++||||+|||||+++++.
T Consensus 48 ~~~l~r~~lAEflGT~lLV~~G~Gs~a~~---~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~ 124 (340)
T 3iyz_A 48 TQAFWKAVTAEFLAMLIFVLLSVGSTINW---GGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCT 124 (340)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHc
Confidence 45789999999999999999999999743 112222346899999999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCc---ccceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 025600 94 GHITFVRSILYWIAQLLGSVVACLLLKFSTGGLE---TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIG 170 (250)
Q Consensus 94 g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~ 170 (250)
|+++|++++.||++|++||++|+.+++.++++.. ...+.+.++.+..++++.|+++||+|+++++.. .|+++....
T Consensus 125 G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~-~d~~~~~~~ 203 (340)
T 3iyz_A 125 RKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFAS-CDDKRTDVT 203 (340)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHh-hcCccCCcc
Confidence 9999999999999999999999999999886532 233445667889999999999999999999984 665554434
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCCCceeecchhHHHHHHHHHHHHHHHhcCC
Q 025600 171 IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYTVAFICP 239 (250)
Q Consensus 171 ~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~~ 239 (250)
...|+.||+++.+.+..++++||+++||||||||+++.++|.++|+||++|++|+++|+++|++++.++
T Consensus 204 ~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~ 272 (340)
T 3iyz_A 204 GSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPD 272 (340)
T ss_pred cchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCC
Confidence 568999999998888888899999999999999999999999999999999999999999999998663
No 3
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=5.6e-54 Score=370.52 Aligned_cols=229 Identities=35% Similarity=0.605 Sum_probs=197.6
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhhhhhccccc--cCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHH
Q 025600 10 AEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKL--TDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVT 87 (250)
Q Consensus 10 ~~~~~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~--~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavT 87 (250)
+|.++++++|++++||+||++|+|+++++++..... .+++.....+++.++++||+++++.+++++++||||+|||||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVT 82 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVT 82 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHH
Confidence 567788999999999999999999999998754321 111122234689999999999999999999999999999999
Q ss_pred HHHHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCc---ccceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCC
Q 025600 88 FGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLE---TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDP 164 (250)
Q Consensus 88 la~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~ 164 (250)
+++++.|+++|++++.|+++|++||++|+.+++.++++.. ...+.+.++.+..++++.|+++|++|+++++.. .|+
T Consensus 83 la~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~-~d~ 161 (271)
T 1j4n_A 83 LGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLAT-TDR 161 (271)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHH-TCS
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhh-ccc
Confidence 9999999999999999999999999999999999986432 233455667888999999999999999999984 666
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCCCceeecchhHHHHHHHHHHHHHHHhcCC
Q 025600 165 KRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYTVAFICP 239 (250)
Q Consensus 165 ~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~~ 239 (250)
++...+...|+.||+.+...+..++++||+++||||||||++++++|+++|+||++|++|+++++++|++++.++
T Consensus 162 ~~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~ 236 (271)
T 1j4n_A 162 RRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPR 236 (271)
T ss_dssp SCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred cCCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 554444679999999999888888889999999999999999999999999999999999999999999988763
No 4
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=7.9e-54 Score=372.70 Aligned_cols=226 Identities=34% Similarity=0.595 Sum_probs=194.6
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHH
Q 025600 9 PAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTF 88 (250)
Q Consensus 9 ~~~~~~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTl 88 (250)
.+|..+++++|++++||+||++|+|+++++++.... .+...+.+++.++++||+++++++++++++||||+|||||+
T Consensus 4 ~~~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~---~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTl 80 (301)
T 2zz9_A 4 FKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGG---SENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTV 80 (301)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTC---C-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---CCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHH
Confidence 457778999999999999999999999999865331 11223457899999999999999999999999999999999
Q ss_pred HHHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCcc---cceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 025600 89 GAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLET---SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPK 165 (250)
Q Consensus 89 a~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~ 165 (250)
++++.|+++|++++.|+++|++||++|+.+++.++++... ..+.+.++.+..++++.|+++||+|+++++.. .|++
T Consensus 81 a~~~~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~-~d~~ 159 (301)
T 2zz9_A 81 AMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFAS-CDDK 159 (301)
T ss_dssp HHHHTSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-SCSS
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHh-cCCC
Confidence 9999999999999999999999999999999999875322 23345567789999999999999999999984 5655
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCCCceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 166 RGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 166 ~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
+.......|+.||+.+...+..++++||+++||||||||+++.++|.++|+||++|++|+++|+++|++++.+
T Consensus 160 ~~~~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~ 232 (301)
T 2zz9_A 160 RTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCP 232 (301)
T ss_dssp SSCCSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred CCCccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCC
Confidence 5443457899999999888888889999999999999999999999999999999999999999999998764
No 5
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=1.3e-54 Score=378.38 Aligned_cols=228 Identities=39% Similarity=0.605 Sum_probs=195.1
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHH
Q 025600 8 NPAEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVT 87 (250)
Q Consensus 8 ~~~~~~~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavT 87 (250)
+.+|..+++++|++++||+||++|+|+++++++......+ .....+++.++++||+++++++++++++||||+|||||
T Consensus 51 ~~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~--~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVT 128 (304)
T 3cn5_A 51 DLGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETV--VCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVT 128 (304)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS--TTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHH
T ss_pred CccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccC--CCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHH
Confidence 4567778899999999999999999999999875433221 12346899999999999999999999999999999999
Q ss_pred HHHHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCC----cccceeccCCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 025600 88 FGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGL----ETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVD 163 (250)
Q Consensus 88 la~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~ 163 (250)
+++++.|+++|++++.|+++|++||++|+.+++.++++. ......+.++.+..++++.|+++||+|+++++. ..|
T Consensus 129 la~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~-~~d 207 (304)
T 3cn5_A 129 FGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFS-ATD 207 (304)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TEE
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhh-eec
Confidence 999999999999999999999999999999999987532 111223456778999999999999999999996 577
Q ss_pred CCCCCCCc----hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHc---ccCCCceeecchhHHHHHHHHHHHHHHHh
Q 025600 164 PKRGNIGI----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV---SWTWDNHWVYWLGPFIGAAIAAIAYTVAF 236 (250)
Q Consensus 164 ~~~~~~~~----~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~---~~~~~~~~vy~~ap~~Ga~~a~~~~~~l~ 236 (250)
+++...+. +.|+.||+++.+.+++.+++||+++||||||||+++ +++|+++|+||++|++|+++|+++|++++
T Consensus 208 ~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~ 287 (304)
T 3cn5_A 208 PKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVL 287 (304)
T ss_dssp EEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTS
T ss_pred CccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHh
Confidence 55433322 789999999999999999999999999999999998 56899999999999999999999999987
Q ss_pred cC
Q 025600 237 IC 238 (250)
Q Consensus 237 ~~ 238 (250)
.+
T Consensus 288 ~~ 289 (304)
T 3cn5_A 288 RA 289 (304)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 6
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=2.1e-53 Score=367.58 Aligned_cols=222 Identities=30% Similarity=0.436 Sum_probs=189.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccc-cc-CCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHH
Q 025600 15 PDALRAAVAEFFSMVIFVFAGQGSGMAYSK-LT-DNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFV 92 (250)
Q Consensus 15 ~~~~r~~~~EfigT~llvf~~~g~~~~~~~-~~-~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l 92 (250)
++.+|++++||+||++|+|++++++..... .. .+...++.+++.++++||+++++++++++++||||+|||||+++++
T Consensus 42 ~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~ 121 (279)
T 2w2e_A 42 RNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVL 121 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHH
Confidence 578899999999999999999987532111 11 1112233578899999999999999999999999999999999999
Q ss_pred hcCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCcccceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCch
Q 025600 93 GGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIGII 172 (250)
Q Consensus 93 ~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~ 172 (250)
.|+++|++++.|+++|++||++|+.+++.++++.......+.++.+..++++.|+++|++|+++++....++++ ...+
T Consensus 122 ~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~--~~~~ 199 (279)
T 2w2e_A 122 ARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIAFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHR--ATWF 199 (279)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCST--TGGG
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCC--CcCc
Confidence 99999999999999999999999999999997644222334456788999999999999999999985444332 2357
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCC-CceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 173 APIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTW-DNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 173 ~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~-~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
.|+.||+.+.+.+++.+++||+++||||||||+++.+.| .++|+||++|++|+++|+++|+++...
T Consensus 200 ~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~ 266 (279)
T 2w2e_A 200 APFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWL 266 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999998765 689999999999999999999999766
No 7
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-53 Score=365.41 Aligned_cols=222 Identities=34% Similarity=0.566 Sum_probs=195.9
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHH
Q 025600 10 AEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFG 89 (250)
Q Consensus 10 ~~~~~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla 89 (250)
+|.++++++|++++||+||++|+|+++++++.. . + .+.+++.++++||+++++.+++++++||||+|||||++
T Consensus 4 ~e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~---~-~---~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla 76 (266)
T 3d9s_A 4 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKW---P-S---ALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLA 76 (266)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCC---S-S---SCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred hhhhChHHHHHHHHHHHHHHHHHHHHHHHHhCC---C-C---CCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHH
Confidence 366788999999999999999999999988521 1 1 12478899999999999999999999999999999999
Q ss_pred HHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCc---ccceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 025600 90 AFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLE---TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 166 (250)
Q Consensus 90 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~ 166 (250)
+++.|+++|++++.|+++|++||++|+.+++.++++.. ...+.+.++.+..++++.|+++|++|+++++.. .|+++
T Consensus 77 ~~~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~ 155 (266)
T 3d9s_A 77 LLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFAS-TDSRR 155 (266)
T ss_dssp HHHTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-HCTTC
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccC
Confidence 99999999999999999999999999999999986421 223345567788999999999999999999985 67665
Q ss_pred CCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCCCc-eeecchhHHHHHHHHHHHHHHHhcCC
Q 025600 167 GNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDN-HWVYWLGPFIGAAIAAIAYTVAFICP 239 (250)
Q Consensus 167 ~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~-~~vy~~ap~~Ga~~a~~~~~~l~~~~ 239 (250)
.......|+.||+++.+.++.++++||+++||||||||++++++|++ +|+||++|++|+++|+++|++++.++
T Consensus 156 ~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 229 (266)
T 3d9s_A 156 TSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN 229 (266)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCccchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCC
Confidence 44445789999999999999999999999999999999999999998 99999999999999999999998763
No 8
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=2.8e-52 Score=358.49 Aligned_cols=222 Identities=36% Similarity=0.610 Sum_probs=196.0
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHH
Q 025600 10 AEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFG 89 (250)
Q Consensus 10 ~~~~~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla 89 (250)
+|.++++++|++++||+||++|+++++++++.. +..+.+++.+++++|+++++.+++++++||+|+|||||++
T Consensus 2 ~e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~-------~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla 74 (263)
T 2b6o_A 2 WELRSASFWRAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFA 74 (263)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-------CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHH
Confidence 467788999999999999999999999988521 1123578899999999999999999999999999999999
Q ss_pred HHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCc---ccceeccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 025600 90 AFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLE---TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKR 166 (250)
Q Consensus 90 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~ 166 (250)
+++.|+++|++.+.|+++|++|+++|+.+++.++++.. ...+.+.++.+..++++.|+++|++|+++++.. .|+++
T Consensus 75 ~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~ 153 (263)
T 2b6o_A 75 FLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERR 153 (263)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-SCTTS
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccC
Confidence 99999999999999999999999999999999987532 234456677889999999999999999999985 67665
Q ss_pred CCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccCCCceeecchhHHHHHHHHHHHHHHHhcCC
Q 025600 167 GNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGAAIAAIAYTVAFICP 239 (250)
Q Consensus 167 ~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~~ 239 (250)
.......|+.||+.+.+.++..+++||+++||||||||++++++|+++|+||++|++|+++|+++|++++.++
T Consensus 154 ~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 226 (263)
T 2b6o_A 154 NGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 226 (263)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred CCCcccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4444578999999999999999999999999999999999999999999999999999999999999987663
No 9
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=4.4e-52 Score=354.46 Aligned_cols=217 Identities=28% Similarity=0.403 Sum_probs=184.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHH
Q 025600 13 GQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFV 92 (250)
Q Consensus 13 ~~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l 92 (250)
.+++++|++++||+||++|+++||++++...... ....+++.++++||+++++++++++++||||+|||||+++++
T Consensus 25 ~~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~----~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~ 100 (256)
T 3llq_A 25 QSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFP----ELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTV 100 (256)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHTTCT----TTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC----CCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHH
Confidence 4577899999999999999999999985332221 123589999999999999999999999999999999999999
Q ss_pred hcCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCc---------ccceeccC-CCchhHHHHHHHHHHHHHHHHHHHhcc
Q 025600 93 GGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLE---------TSAFALSS-GVGAWNAVVFEIVMTFGLVYTVYATAV 162 (250)
Q Consensus 93 ~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~E~~~T~~l~~~v~~~~~ 162 (250)
.|+++|++++.|+++|++||++|+.+++.++++.. ...+++.| ..+..++++.|+++|++|+++++. ..
T Consensus 101 ~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~-~~ 179 (256)
T 3llq_A 101 AGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILG-ST 179 (256)
T ss_dssp TTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHH-hc
Confidence 99999999999999999999999999999875321 01122223 467889999999999999999998 46
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccC--CCceeecchhHHHHHHHHHHHHHHHh
Q 025600 163 DPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWT--WDNHWVYWLGPFIGAAIAAIAYTVAF 236 (250)
Q Consensus 163 ~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~--~~~~~vy~~ap~~Ga~~a~~~~~~l~ 236 (250)
|+++. ....|+.||+++.++.++.+++||+++|||||||||++.++ |+++|+||++|++|+++|+++|+++.
T Consensus 180 d~~~~--~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 180 HGRVP--AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp STTSC--TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCC--ccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 76543 24689999999999999999999999999999999998764 56899999999999999999999874
No 10
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=8.8e-52 Score=350.13 Aligned_cols=215 Identities=29% Similarity=0.452 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHhcCC
Q 025600 17 ALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHI 96 (250)
Q Consensus 17 ~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~g~~ 96 (250)
++|++++||+||++|+|++++++...... +.+..+++.++++||+++++.+++++++||||+|||||+++++.|++
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~----~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~ 79 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGF----PELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRF 79 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTC----TTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCC----CCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCC
Confidence 68999999999999999999988432111 11235899999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHhhhHHHHHHHHHHHhCCCc-----------ccceeccC-CCchhHHHHHHHHHHHHHHHHHHHhccCC
Q 025600 97 TFVRSILYWIAQLLGSVVACLLLKFSTGGLE-----------TSAFALSS-GVGAWNAVVFEIVMTFGLVYTVYATAVDP 164 (250)
Q Consensus 97 ~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~~E~~~T~~l~~~v~~~~~~~ 164 (250)
+|+|++.|+++|++|+++|+.+++.++++.. .....+.| +.+..++++.|+++|++|+++++. ..|+
T Consensus 80 ~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~-~~d~ 158 (234)
T 2o9g_A 80 PAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHG-ATDK 158 (234)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHH-HTST
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHH-hcCC
Confidence 9999999999999999999999999986431 01122222 567899999999999999999998 4675
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHcccC--CCceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 165 KRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWT--WDNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 165 ~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~--~~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
++. ....|+.||+.+.+.+++.+++||+++|||||||||++.++ |+++|+||++|++|+++++++|++++.+
T Consensus 159 ~~~--~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 159 FAP--AGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp TSC--TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCc--cchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 432 34799999999999999999999999999999999999875 5599999999999999999999998765
No 11
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=3.8e-51 Score=348.95 Aligned_cols=220 Identities=32% Similarity=0.468 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccccccCCC-------CC-----CCchhHHHHHHHHHHHHHHHHHhccccccccc
Q 025600 16 DALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNG-------AA-----TPAGLVSASIAHAFALFVAVSVGANISGGHVN 83 (250)
Q Consensus 16 ~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~-------~~-----~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~N 83 (250)
+++|++++||+||++|+|+++++++....+.+++ .. +..+++.++++||+++++.+++++++||||+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 5789999999999999999999987543232110 00 23467889999999999999999999999999
Q ss_pred hHHHHHHHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCc---ccceec--cCCCchhHHHHHHHHHHHHHHHHHH
Q 025600 84 PAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLE---TSAFAL--SSGVGAWNAVVFEIVMTFGLVYTVY 158 (250)
Q Consensus 84 PavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~---~~~~~~--~~~~~~~~~~~~E~~~T~~l~~~v~ 158 (250)
||||+++++.|+++|+|++.|+++|++|+++|+.+++.+++++. ...+.+ .++.+..++++.|+++|++|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 99999999999999999999999999999999999999998621 222333 3467889999999999999999999
Q ss_pred HhccCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHc--c----cCCCceeecchhHHHHHHHHHHHH
Q 025600 159 ATAVDPKRGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV--S----WTWDNHWVYWLGPFIGAAIAAIAY 232 (250)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~--~----~~~~~~~vy~~ap~~Ga~~a~~~~ 232 (250)
....|+++. ....|+.+|+.+.+.+++.+++||+++||||||+|++. . .+|++.|+||++|++|+++++++|
T Consensus 163 ~~~~~~~~~--~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y 240 (246)
T 2f2b_A 163 GIAVDERAP--KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTY 240 (246)
T ss_dssp HHTTSTTSC--TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCC--CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHH
Confidence 864554432 35689999999999999999999999999999999992 2 368888999999999999999999
Q ss_pred HHHhc
Q 025600 233 TVAFI 237 (250)
Q Consensus 233 ~~l~~ 237 (250)
+.++.
T Consensus 241 ~~l~~ 245 (246)
T 2f2b_A 241 QYLTS 245 (246)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 98864
No 12
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=1.5e-51 Score=357.52 Aligned_cols=220 Identities=26% Similarity=0.404 Sum_probs=184.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHh
Q 025600 14 QPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVG 93 (250)
Q Consensus 14 ~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~ 93 (250)
+++++|++++||+||++|+|+|+++++... +.+. ..+.+.++++||+++++.+++++++||||+|||||+++++.
T Consensus 4 ~~~~~~~~laEflGT~~Lv~~G~g~~~~~~-l~~~----~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~ 78 (281)
T 1ldf_A 4 TSTLKGQCIAEFLGTGLLIFFGVGCVAALK-VAGA----SFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLF 78 (281)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHH-HSCC----CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCC----CCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHc
Confidence 456899999999999999999999886432 2221 12445589999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCCc-------------------ccceec--cCCCchhHHHHHHHHHHHH
Q 025600 94 GHITFVRSILYWIAQLLGSVVACLLLKFSTGGLE-------------------TSAFAL--SSGVGAWNAVVFEIVMTFG 152 (250)
Q Consensus 94 g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~-------------------~~~~~~--~~~~~~~~~~~~E~~~T~~ 152 (250)
|+++|++++.|+++|++||++|+.+++.++++.. ...+.+ .++.+..++++.|+++|++
T Consensus 79 g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~ 158 (281)
T 1ldf_A 79 ACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAI 158 (281)
T ss_dssp SCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998875310 112333 3457889999999999999
Q ss_pred HHHHHHHhccCCCCCC-CCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-------CC------Cceeecc
Q 025600 153 LVYTVYATAVDPKRGN-IGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-------TW------DNHWVYW 218 (250)
Q Consensus 153 l~~~v~~~~~~~~~~~-~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-------~~------~~~~vy~ 218 (250)
|+++++.. .|+++.. .+.+.|+.||+.+.+.+++.+++||+++|||||||||++.. .| .++|+||
T Consensus 159 Lv~~il~~-~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~ 237 (281)
T 1ldf_A 159 LMGLILAL-TDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPL 237 (281)
T ss_dssp HHHHHHHH-HCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHH
T ss_pred HHHHHHHH-hccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHh
Confidence 99999984 6666543 34679999999999999999999999999999999999751 22 2799999
Q ss_pred hhHHHHHHHHHHHHHHHhcCC
Q 025600 219 LGPFIGAAIAAIAYTVAFICP 239 (250)
Q Consensus 219 ~ap~~Ga~~a~~~~~~l~~~~ 239 (250)
++|++|+++|+++|++++.++
T Consensus 238 vgPi~Ga~la~~~y~~l~~~~ 258 (281)
T 1ldf_A 238 FGPIVGAIVGAFAYRKLIGRH 258 (281)
T ss_dssp HHHHHHHHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcc
Confidence 999999999999999998653
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=1.5e-51 Score=353.36 Aligned_cols=219 Identities=21% Similarity=0.345 Sum_probs=183.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHh
Q 025600 14 QPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVG 93 (250)
Q Consensus 14 ~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~ 93 (250)
.++++|++++||+||++|+|+|++++.... ..+. ..+++.++++||+++++.+++++++||||+|||||+++++.
T Consensus 6 ~~~~~~~~~aEflGT~~lv~~G~g~~~~~~--~~~~---~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~ 80 (258)
T 3c02_A 6 YKSYVREFIGEFLGTFVLMFLGEGATANFH--TTGL---SGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSI 80 (258)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HSSS---TTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCCC---CccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHh
Confidence 456899999999999999999999886432 1111 24789999999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHhhhHHHHHHHHHHHhCCC----cccc----eeccCCCchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 025600 94 GHITFVRSILYWIAQLLGSVVACLLLKFSTGGL----ETSA----FALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPK 165 (250)
Q Consensus 94 g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~----~~~~----~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~ 165 (250)
|+++|++++.|+++|++||++|+.+++.++++. ..+. .......+..++++.|+++|++|+++++.. .|+|
T Consensus 81 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~-~d~~ 159 (258)
T 3c02_A 81 NKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVV-VDEN 159 (258)
T ss_dssp TSSCGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-HCHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHH-hCcc
Confidence 999999999999999999999999999987531 1010 111123345669999999999999999985 6655
Q ss_pred CC-CCCchh-HHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc------CC----CceeecchhHHHHHHHHHHHHH
Q 025600 166 RG-NIGIIA-PIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW------TW----DNHWVYWLGPFIGAAIAAIAYT 233 (250)
Q Consensus 166 ~~-~~~~~~-~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~------~~----~~~~vy~~ap~~Ga~~a~~~~~ 233 (250)
+. ....+. |+.||+.+.+.+++.+++||+++|||||||||++.+ +| +++|+||++|++|+++++++|+
T Consensus 160 ~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~ 239 (258)
T 3c02_A 160 ICGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYD 239 (258)
T ss_dssp HHCSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHH
Confidence 43 234567 999999999999999999999999999999999862 34 5699999999999999999999
Q ss_pred HHhcC
Q 025600 234 VAFIC 238 (250)
Q Consensus 234 ~l~~~ 238 (250)
+++.+
T Consensus 240 ~~~~~ 244 (258)
T 3c02_A 240 KVICP 244 (258)
T ss_dssp HTHHH
T ss_pred HHhcc
Confidence 98865
No 14
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.60 E-value=2.1e-15 Score=129.16 Aligned_cols=101 Identities=23% Similarity=0.290 Sum_probs=85.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccCCCCCCCC-chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CCCcee
Q 025600 138 GAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDNHW 215 (250)
Q Consensus 138 ~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~~~~~ 215 (250)
+..+.++.|+++|++|++..+......+....+ ....+.+|+.+++.++..+++||+|+|||++++.++.++ +|.+.|
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~ 87 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAI 87 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHHH
Confidence 567899999999999999988865432221111 135788999999999999999999999999999999876 799999
Q ss_pred ecchhHHHHHHHHHHHHHHHhcC
Q 025600 216 VYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 216 vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
+|+++|++|+++++.+++.++++
T Consensus 88 ~Yi~AQ~lGa~~ga~l~~~~~~~ 110 (263)
T 2b6o_A 88 CYVVAQLLGAVAGAAVLYSVTPP 110 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999875
No 15
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.53 E-value=1.3e-14 Score=124.39 Aligned_cols=101 Identities=20% Similarity=0.200 Sum_probs=85.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccCCCCCCCC-chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CCCcee
Q 025600 138 GAWNAVVFEIVMTFGLVYTVYATAVDPKRGNIG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDNHW 215 (250)
Q Consensus 138 ~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~~~~~ 215 (250)
+..+.++.|+++|++|++..+..+....+...+ ....+.+|+.+++.+++.+++||+|+|||++++.++.++ +|.+.+
T Consensus 10 ~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~ 89 (266)
T 3d9s_A 10 AFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAF 89 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHHH
Confidence 567899999999999999988865432222222 135788999999999999999999999999999999887 799999
Q ss_pred ecchhHHHHHHHHHHHHHHHhcC
Q 025600 216 VYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 216 vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
.|+++|++|+++|+.+.+.++++
T Consensus 90 ~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 90 FYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999988754
No 16
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.52 E-value=7.2e-14 Score=118.67 Aligned_cols=101 Identities=26% Similarity=0.399 Sum_probs=82.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHH-
Q 025600 14 QPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFV- 92 (250)
Q Consensus 14 ~~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l- 92 (250)
..+..+.++.|+++|++|++..+++.... +. +.+ ..++..|+.+....+..+++||+|+|||+|++..+
T Consensus 140 ~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~-----~~---~~~--~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~ 209 (246)
T 2f2b_A 140 GISYWQAMLAEVVGTFLLMITIMGIAVDE-----RA---PKG--FAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLN 209 (246)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHTTST-----TS---CTT--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHheeeEEecCC-----CC---CCc--eeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHH
Confidence 45688999999999999999987654211 10 111 24677899999999999999999999999999888
Q ss_pred ----hcCCCchhHHHHHHHHhhhHHHHHHHHHHHhC
Q 025600 93 ----GGHITFVRSILYWIAQLLGSVVACLLLKFSTG 124 (250)
Q Consensus 93 ----~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~ 124 (250)
.++..|.+.+.|+++|++|+++|+++.+.+.+
T Consensus 210 ~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 210 DMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 45678999999999999999999998877653
No 17
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.51 E-value=2.1e-14 Score=122.18 Aligned_cols=101 Identities=29% Similarity=0.264 Sum_probs=83.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhcc-CCCCC-C-CC-chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CCC
Q 025600 138 GAWNAVVFEIVMTFGLVYTVYATAV-DPKRG-N-IG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWD 212 (250)
Q Consensus 138 ~~~~~~~~E~~~T~~l~~~v~~~~~-~~~~~-~-~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~~ 212 (250)
+..+.++.|+++|++|++..++.+. ..+.+ . .+ ....+.+|+.+++.+++.+++||+|+|||++++.++.++ +|.
T Consensus 28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 107 (256)
T 3llq_A 28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPAS 107 (256)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCHH
Confidence 5688999999999999998777532 11111 1 11 124688899999999999999999999999999999876 799
Q ss_pred ceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 213 NHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 213 ~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
+...|+++|++|+++|+.+.+.++++
T Consensus 108 ~~~~YiiAQ~lGA~~ga~lv~~~~~~ 133 (256)
T 3llq_A 108 SLVPYVIAQVAGAIVAAAALYVIATG 133 (256)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999888753
No 18
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.51 E-value=5.1e-14 Score=122.31 Aligned_cols=101 Identities=17% Similarity=0.195 Sum_probs=85.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccCCCCC---CCCc--hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CC
Q 025600 138 GAWNAVVFEIVMTFGLVYTVYATAVDPKRG---NIGI--IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TW 211 (250)
Q Consensus 138 ~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~---~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~ 211 (250)
+.++.++.|+++|++|++..+......... .... ...+.+|+.+++.+++.+++||+|+|||++++.++.+. .|
T Consensus 11 ~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 90 (301)
T 2zz9_A 11 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 90 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCCH
Confidence 678999999999999999888754332111 1111 35788899999999999999999999999999999887 79
Q ss_pred CceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 212 DNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 212 ~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
.+...|+++|++|+++|+.+.+.++++
T Consensus 91 ~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 117 (301)
T 2zz9_A 91 AKSVFYITAQCLGAIIGAGILYLVTPP 117 (301)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999988765
No 19
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.48 E-value=4.4e-14 Score=119.06 Aligned_cols=100 Identities=23% Similarity=0.202 Sum_probs=83.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCC-CCC-C-C-chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CCCc
Q 025600 139 AWNAVVFEIVMTFGLVYTVYATAVDPK-RGN-I-G-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDN 213 (250)
Q Consensus 139 ~~~~~~~E~~~T~~l~~~v~~~~~~~~-~~~-~-~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~~~ 213 (250)
..+.++.|+++|++|++..+..+..++ .+. . + ....+.+|+.+.+.+++.+++||+|+|||++++..+.++ +|.+
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE 83 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHH
Confidence 578899999999999998776433222 111 1 1 125688999999999999999999999999999999887 7999
Q ss_pred eeecchhHHHHHHHHHHHHHHHhcC
Q 025600 214 HWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 214 ~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
...|+++|++|+++++.+.+.++++
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~ 108 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALLYLIASG 108 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999988865
No 20
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.48 E-value=4.9e-14 Score=117.91 Aligned_cols=101 Identities=17% Similarity=0.225 Sum_probs=83.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccCC--CCC-CCC--chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CC
Q 025600 138 GAWNAVVFEIVMTFGLVYTVYATAVDP--KRG-NIG--IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TW 211 (250)
Q Consensus 138 ~~~~~~~~E~~~T~~l~~~v~~~~~~~--~~~-~~~--~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~ 211 (250)
+.+|.++.|+++|++|++..+..+... +.+ +.. ....+.+|+.+.+.+++.+++||+|+|||++++..+.++ +|
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 357899999999999999887754431 111 111 235678899999999999999999999999999999876 78
Q ss_pred CceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 212 DNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 212 ~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
.+...|+++|++|+++++.+.+.++++
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~ 108 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGILYLVTPP 108 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 899999999999999999998887754
No 21
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.47 E-value=5e-14 Score=123.58 Aligned_cols=101 Identities=17% Similarity=0.216 Sum_probs=83.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccCCC--C-CCCC--chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CC
Q 025600 138 GAWNAVVFEIVMTFGLVYTVYATAVDPK--R-GNIG--IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TW 211 (250)
Q Consensus 138 ~~~~~~~~E~~~T~~l~~~v~~~~~~~~--~-~~~~--~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~ 211 (250)
+.++.++.||++|++|++..++.+.... . .... ....+.+|+.+++.+++.+++||+|+|||++++.++.+. .|
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~ 129 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 129 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCH
Confidence 4689999999999999998777543211 1 1111 235778899999999999999999999999999999876 79
Q ss_pred CceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 212 DNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 212 ~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
.+...|+++|++|+++|+.+.+.++++
T Consensus 130 ~~~~~YiiAQ~lGA~~GA~lv~~~~~~ 156 (340)
T 3iyz_A 130 AKSVFYITAQCLGAIIGAGILYLVTPP 156 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 999999999999999999998888765
No 22
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.46 E-value=5.3e-14 Score=120.21 Aligned_cols=101 Identities=19% Similarity=0.189 Sum_probs=82.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccC--CCCCCCC-chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CCCc
Q 025600 138 GAWNAVVFEIVMTFGLVYTVYATAVD--PKRGNIG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDN 213 (250)
Q Consensus 138 ~~~~~~~~E~~~T~~l~~~v~~~~~~--~~~~~~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~~~ 213 (250)
+..+.++.|+++|++|++..+..+.. +.+...+ ....+.+|+.+.+.+++.+++||+|+|||+|++.++.++ +|.+
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 87 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKK 87 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHH
Confidence 56789999999999999976653221 1111112 125677899999999999999999999999999999887 8999
Q ss_pred eeecchhHHHHHHHHHHHHHHHhcC
Q 025600 214 HWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 214 ~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
...|+++|++|+++|+.+.+.++++
T Consensus 88 ~~~Yi~AQ~lGa~~ga~l~~~~~~~ 112 (258)
T 3c02_A 88 IPVYFFAQLLGAFVGTSTVYGLYHG 112 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcch
Confidence 9999999999999999998888764
No 23
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.46 E-value=9.7e-14 Score=119.32 Aligned_cols=101 Identities=21% Similarity=0.346 Sum_probs=83.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccC-------CCC-CCC-C-chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHc
Q 025600 138 GAWNAVVFEIVMTFGLVYTVYATAVD-------PKR-GNI-G-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 207 (250)
Q Consensus 138 ~~~~~~~~E~~~T~~l~~~v~~~~~~-------~~~-~~~-~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~ 207 (250)
+.++.++.|+++|++|++..+..+.. ++. ... + ....+.+|+.+++.+++.+++||+|+|||++++.++.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 46789999999999999987664321 011 111 1 2357888999999999999999999999999999998
Q ss_pred cc-CCCceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 208 SW-TWDNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 208 ~~-~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
++ .|.+...|+++|++|+++|+.+.+.++.+
T Consensus 89 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 120 (271)
T 1j4n_A 89 CQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (271)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 87 79999999999999999999999888754
No 24
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.45 E-value=2.6e-13 Score=116.92 Aligned_cols=101 Identities=18% Similarity=0.180 Sum_probs=82.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhc--cCCC-----CCCC-Cc--hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHc
Q 025600 138 GAWNAVVFEIVMTFGLVYTVYATA--VDPK-----RGNI-GI--IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 207 (250)
Q Consensus 138 ~~~~~~~~E~~~T~~l~~~v~~~~--~~~~-----~~~~-~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~ 207 (250)
+.++.++.|+++|++|++..+..+ .... .+.. .. ...+.+|+.+++.+++.+++||+|+|||++++.++.
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 122 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA 122 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence 456788999999999998766531 1111 0111 11 256788999999999999999999999999999998
Q ss_pred cc-CCCceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 208 SW-TWDNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 208 ~~-~~~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
++ .|.+...|+++|++|+++|+.+.+.++++
T Consensus 123 g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~ 154 (279)
T 2w2e_A 123 RAIPPFRGILMAFTQIVAGMAAAGAASAMTPG 154 (279)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 87 79999999999999999999999988865
No 25
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.44 E-value=1.3e-13 Score=119.27 Aligned_cols=101 Identities=17% Similarity=0.129 Sum_probs=82.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccC--CCCCCCC-chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-CCCc
Q 025600 138 GAWNAVVFEIVMTFGLVYTVYATAVD--PKRGNIG-IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWDN 213 (250)
Q Consensus 138 ~~~~~~~~E~~~T~~l~~~v~~~~~~--~~~~~~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~~~~ 213 (250)
+..+.++.|+++|++|++..+..+.. -++...+ ....+.+|+.+.+.+++.+++||+|+|||++++..+.++ +|.+
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 85 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRK 85 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHH
Confidence 56789999999999999976653221 0111122 235788899999999999999999999999999999887 8999
Q ss_pred eeecchhHHHHHHHHHHHHHHHhcC
Q 025600 214 HWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 214 ~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
...|+++|++|+++|+.+.+.++++
T Consensus 86 ~~~Yi~AQ~lGA~~ga~l~~~~~~~ 110 (281)
T 1ldf_A 86 VIPFIVSQVAGAFCAAALVYGLYYN 110 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999998887754
No 26
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.44 E-value=1.3e-13 Score=119.90 Aligned_cols=101 Identities=20% Similarity=0.229 Sum_probs=83.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccC---CCC-CCCCc--hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHccc-C
Q 025600 138 GAWNAVVFEIVMTFGLVYTVYATAVD---PKR-GNIGI--IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-T 210 (250)
Q Consensus 138 ~~~~~~~~E~~~T~~l~~~v~~~~~~---~~~-~~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~-~ 210 (250)
+.++.++.|+++|++|++..+..+.. .+. ..... ...+.+|+.+++.+++.+++||+|+|||+|++.++.+. .
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~ 138 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVE 138 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCC
Confidence 56789999999999999987664321 111 11111 25678899999999999999999999999999999886 7
Q ss_pred CCceeecchhHHHHHHHHHHHHHHHhcC
Q 025600 211 WDNHWVYWLGPFIGAAIAAIAYTVAFIC 238 (250)
Q Consensus 211 ~~~~~vy~~ap~~Ga~~a~~~~~~l~~~ 238 (250)
|.+...|+++|++|+++|+.+.+.++++
T Consensus 139 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 166 (304)
T 3cn5_A 139 LLRALVYMIAQCLGAICGVGLVKAFMKG 166 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8999999999999999999999888754
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=89.20 E-value=8.3 Score=32.65 Aligned_cols=102 Identities=19% Similarity=0.275 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHh--CCC----c--
Q 025600 56 LVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFST--GGL----E-- 127 (250)
Q Consensus 56 ~~~~a~~~g~~l~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~--~~~----~-- 127 (250)
.+..++.+.+++...+..-+..-=+ |=-.+ ...+.||++|++.+--+.-=.+|=++|+++.-++. .+. +
T Consensus 68 ~ll~g~~F~vGL~lVvl~G~ELFTg--n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~ 144 (285)
T 3kcu_A 68 KLVGGICFSLGLILCVVCGADLFTS--TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQ 144 (285)
T ss_dssp HHHHHHHHTHHHHHHHHHTCCCTTT--THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTH
T ss_pred HHHHHHHHHHHHHHHHHhCcccccc--chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchH
Confidence 4455677777777776655443212 42233 34568999998876665555556666555444331 100 0
Q ss_pred cc-----ceeccCCCchhHHHHHHHHHHHHHHHHHHHh
Q 025600 128 TS-----AFALSSGVGAWNAVVFEIVMTFGLVYTVYAT 160 (250)
Q Consensus 128 ~~-----~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~ 160 (250)
.. .....-+.+..+.|+-=.++-++..+++...
T Consensus 145 ~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 182 (285)
T 3kcu_A 145 WGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0011123466777777788888888877763
No 28
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=75.85 E-value=34 Score=28.58 Aligned_cols=101 Identities=15% Similarity=0.198 Sum_probs=59.7
Q ss_pred chhHHHHHHHHHHHHHHHHHhcccccccc---chHHHHHHHHhcCCCchhHHHHHHHHhhhHHHHHHHHHHHhC--CCc-
Q 025600 54 AGLVSASIAHAFALFVAVSVGANISGGHV---NPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTG--GLE- 127 (250)
Q Consensus 54 ~~~~~~a~~~g~~l~~~i~~~~~iSGah~---NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~--~~~- 127 (250)
...+..++.+.+++...+.. |+.+ |=.....-.+.||.+|++.+--+.-=.+|=++|+++.-++.. +..
T Consensus 62 ~~~ll~g~~F~~Gl~lVvl~-----g~eLfTgn~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~ 136 (268)
T 3tds_E 62 MTKIVMGLSFAIALSLVIMT-----GTELFTGNNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVD 136 (268)
T ss_dssp THHHHHHHTCTHHHHHHHHH-----TCCCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHh-----CccccccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCC
Confidence 34555667777777766654 3443 433233445789999999887777777777777665544331 110
Q ss_pred ccc--------eeccCCCchhHHHHHHHHHHHHHHHHHHH
Q 025600 128 TSA--------FALSSGVGAWNAVVFEIVMTFGLVYTVYA 159 (250)
Q Consensus 128 ~~~--------~~~~~~~~~~~~~~~E~~~T~~l~~~v~~ 159 (250)
.+. ....-+.+..+.|+-=.++-++..+++..
T Consensus 137 ~~~~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~ 176 (268)
T 3tds_E 137 KGPVAEFFANTAASKASMPFTALFFRGILCNILVCVSVLC 176 (268)
T ss_dssp SSHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 100 00011345677777777778777777776
No 29
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=47.00 E-value=4.9 Score=34.79 Aligned_cols=19 Identities=32% Similarity=0.427 Sum_probs=16.2
Q ss_pred ccccccchHHHHHHHHhcC
Q 025600 77 ISGGHVNPAVTFGAFVGGH 95 (250)
Q Consensus 77 iSGah~NPavTla~~l~g~ 95 (250)
=||||++|+++++-.+..+
T Consensus 11 GTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 11 GTGGHVFPALACAREFQAR 29 (365)
T ss_dssp SSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHhC
Confidence 3789999999999988654
No 30
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=42.46 E-value=1.5e+02 Score=24.73 Aligned_cols=139 Identities=12% Similarity=0.144 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhccc-cccccchHHHHHHHHh
Q 025600 15 PDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGAATPAGLVSASIAHAFALFVAVSVGANI-SGGHVNPAVTFGAFVG 93 (250)
Q Consensus 15 ~~~~r~~~~EfigT~llvf~~~g~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~i~~~~~i-SGah~NPavTla~~l~ 93 (250)
++..|.++.-+++-+.+-+.............+. ..+...+..++.+.+++...+..-+.. +|--+ .++ ..+.
T Consensus 28 ~~~~~~~~~~~~AG~~I~~g~~~~~~v~~~~~~~--~~g~~~ll~g~~F~vGL~lVvl~g~ELFTgn~l---~~~-~~~~ 101 (280)
T 3kly_A 28 KAAYKSFLLAISAGIQIGIAFVFYTVVTTGAHDM--PYGVTKLLGGLAFSLGLILVVITGGELFTSSVL---ILV-AKAS 101 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTS--CHHHHHHHHHHHHHHHHHHHHHHTCCCTTTTCC---CCS-SSSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CccHHHHHHHHHHHHHHHHHHHccccccccchH---HHH-HHHc
Confidence 3344455555555555544433222211111110 001124455677777777777665543 34222 222 3468
Q ss_pred cCCCchhHHHHHHHHhhhHHHHHHHHHHHh---CC--Cccc--------ceeccCCCchhHHHHHHHHHHHHHHHHHHH
Q 025600 94 GHITFVRSILYWIAQLLGSVVACLLLKFST---GG--LETS--------AFALSSGVGAWNAVVFEIVMTFGLVYTVYA 159 (250)
Q Consensus 94 g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~---~~--~~~~--------~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~ 159 (250)
||++|++.+--+.-=.+|=++|+++.-++. +. .+.+ .....-+.+..+.|+-=.++-++..+++..
T Consensus 102 ~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~ 180 (280)
T 3kly_A 102 GKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGGQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWM 180 (280)
T ss_dssp SSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 899999988777777777777766555442 10 0000 001112346677777778888888887776
Done!