BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025601
(250 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 103 bits (257), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 82/143 (57%), Gaps = 13/143 (9%)
Query: 98 PEFVVEPVDVRSMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
EFV + + R+ F GT EY+AP+IV G GH VDWW+LG+ ++EL G +PF
Sbjct: 207 KEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265
Query: 156 DHELTLANIVARALE----FPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHP 210
+ + A I R L+ +P+E + A AKDLI +LL KDP++RLG + A IK H
Sbjct: 266 GEKNSQAEISRRILKSEPPYPQE--MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323
Query: 211 FFQGVNWALLRCTTPPFVPPPFN 233
FFQ +NW L VP PF
Sbjct: 324 FFQKINWDDLAAKK---VPAPFK 343
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 26/29 (89%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
LGI+YRD+K EN+L+ S+GH++LTDF LS
Sbjct: 178 LGIIYRDIKLENILLDSNGHVVLTDFGLS 206
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 8/144 (5%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
+F GT EY+APEI+ GH VDWW+LG ++++ G PF G + + T+ I+ L
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKG-ASAIKHHPFFQGVNWA--LLRCTTPPF 227
P P + A+DL+ +LL ++ RLG+ G A ++ HPFF+ +NW L R PPF
Sbjct: 240 LP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPF 297
Query: 228 VPPPFNRELVSD---ESCPETPVE 248
P + E VS + +TPV+
Sbjct: 298 KPLLQSEEDVSQFDSKFTRQTPVD 321
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQI 42
GI+YRDLKPEN+++ GH+ LTDF L C +S + +
Sbjct: 141 GIIYRDLKPENIMLNHQGHVKLTDFGL---CKESIHDGTV 177
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
F GT EY+APEI+ GH VDWW+LG ++++ G PF G + + T+ I+ L
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGSTKG-ASAIKHHPFFQGVNWA--LLRCTTPPFV 228
P P + A+DL+ +LL ++ RLG+ G A ++ HPFF+ +NW L R PPF
Sbjct: 241 P--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFK 298
Query: 229 PPPFNRELVSD---ESCPETPVE 248
P + E VS + +TPV+
Sbjct: 299 PLLQSEEDVSQFDSKFTRQTPVD 321
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQI 42
GI+YRDLKPEN+++ GH+ LTDF L C +S + +
Sbjct: 141 GIIYRDLKPENIMLNHQGHVKLTDFGL---CKESIHDGTV 177
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 98/230 (42%), Gaps = 73/230 (31%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
L IVYRDLKPEN+L+ S GHI+LTDF L C ++ ++H
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGL---CKEN----------------------IEH 192
Query: 62 PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
TS C PE++ AP
Sbjct: 193 NSTTSTFC--------------------------GTPEYL------------------AP 208
Query: 122 EIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATA 181
E++ + + VDWW LG L+E+ YG+ PF + NI+ + L+ +P + +A
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL--KPNITNSA 266
Query: 182 KDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCTTPPFVP 229
+ L+ LL KD +RLG+ IK H FF +NW L + TPPF P
Sbjct: 267 RHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNP 316
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
++ SF GT EY+APE+V+ +GH DWW+ G+ +FE+ G PF+G D + T+ I+
Sbjct: 186 KAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTT 224
L P+ + A+ L+ L ++P RLGS GA IK H F+ ++W L R
Sbjct: 246 KLGMPQ--FLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIK 303
Query: 225 PPFVP 229
PPF P
Sbjct: 304 PPFKP 308
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
LGI+YRDLKPEN+L+ +GHI LTDF LS + D A
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKA 187
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
+F GT EYLAPE++ +G VDWW LG+ ++E+ G PF DHE I+ +
Sbjct: 311 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 370
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRL-GSTKGASAIKHHPFFQGVNWALL--RCTTPPF 227
FP+ + AK L+S LL KDP++RL G ++ A I H FF G+ W + + +PPF
Sbjct: 371 FPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPF 428
Query: 228 VP 229
P
Sbjct: 429 KP 430
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDL 29
+VYRDLK EN+++ DGHI +TDF L
Sbjct: 273 VVYRDLKLENLMLDKDGHIKITDFGL 298
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
+F GT EYLAPE++ +G VDWW LG+ ++E+ G PF DHE I+ +
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 367
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRL-GSTKGASAIKHHPFFQGVNWALL--RCTTPPF 227
FP+ + AK L+S LL KDP++RL G ++ A I H FF G+ W + + +PPF
Sbjct: 368 FPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPF 425
Query: 228 VP 229
P
Sbjct: 426 KP 427
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDL 29
+VYRDLK EN+++ DGHI +TDF L
Sbjct: 270 VVYRDLKLENLMLDKDGHIKITDFGL 295
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
F GT EYLAPE++ +G VDWW LG+ ++E+ G PF DHE I+ + F
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 230
Query: 172 PKEPAVPATAKDLISQLLAKDPERRL-GSTKGASAIKHHPFFQGVNWALL--RCTTPPFV 228
P+ + AK L+S LL KDP++RL G ++ A I H FF G+ W + + +PPF
Sbjct: 231 PR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 288
Query: 229 P 229
P
Sbjct: 289 P 289
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDL 29
+VYRDLK EN+++ DGHI +TDF L
Sbjct: 132 VVYRDLKLENLMLDKDGHIKITDFGL 157
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
F GT EYLAPE++ +G VDWW LG+ ++E+ G PF DHE I+ + F
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 228
Query: 172 PKEPAVPATAKDLISQLLAKDPERRL-GSTKGASAIKHHPFFQGVNWALL--RCTTPPFV 228
P+ + AK L+S LL KDP++RL G ++ A I H FF G+ W + + +PPF
Sbjct: 229 PR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 286
Query: 229 P 229
P
Sbjct: 287 P 287
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDL 29
+VYRDLK EN+++ DGHI +TDF L
Sbjct: 130 VVYRDLKLENLMLDKDGHIKITDFGL 155
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
F GT EYLAPE++ +G VDWW LG+ ++E+ G PF DHE I+ + F
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 229
Query: 172 PKEPAVPATAKDLISQLLAKDPERRL-GSTKGASAIKHHPFFQGVNWALL--RCTTPPFV 228
P+ + AK L+S LL KDP++RL G ++ A I H FF G+ W + + +PPF
Sbjct: 230 PR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 287
Query: 229 P 229
P
Sbjct: 288 P 288
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDL 29
+VYRDLK EN+++ DGHI +TDF L
Sbjct: 131 VVYRDLKLENLMLDKDGHIKITDFGL 156
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
++ SF GT EY+APE+V+ GH DWW+ G+ +FE+ G PF+G D + T+ I+
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTT 224
L P+ + A+ L+ L ++P RLG+ G IK H FF ++W L R
Sbjct: 242 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 299
Query: 225 PPFVP 229
PPF P
Sbjct: 300 PPFKP 304
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
LGI+YRDLKPEN+L+ +GHI LTDF LS + D A
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 183
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
++ SF GT EY+APE+V+ GH DWW+ G+ +FE+ G PF+G D + T+ I+
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTT 224
L P+ + A+ L+ L ++P RLG+ G IK H FF ++W L R
Sbjct: 242 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 299
Query: 225 PPFVP 229
PPF P
Sbjct: 300 PPFKP 304
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
LGI+YRDLKPEN+L+ +GHI LTDF LS + D A
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 183
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
++ SF GT EY+APE+V+ GH DWW+ G+ +FE+ G PF+G D + T+ I+
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTT 224
L P+ + A+ L+ L ++P RLG+ G IK H FF ++W L R
Sbjct: 243 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 300
Query: 225 PPFVP 229
PPF P
Sbjct: 301 PPFKP 305
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
LGI+YRDLKPEN+L+ +GHI LTDF LS + D A
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 184
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
D ++ F GT +Y+APEI+ G+ + VDWW+ G+ L+E+ G +PF G D E +I
Sbjct: 173 DAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 232
Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCT 223
+P+ + AKDL+ +L ++PE+RLG I+ HP F+ +NW L +
Sbjct: 233 MDNPFYPR--WLEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERKEI 287
Query: 224 TPPFVPP---PFNRELVSDESCPETP 246
PPF P PF+ E E P
Sbjct: 288 DPPFRPKVKSPFDCSNFDKEFLNEKP 313
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDL 29
GIVYRDLK +N+L+ DGHI + DF +
Sbjct: 139 GIVYRDLKLDNILLDKDGHIKIADFGM 165
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
D ++ F GT +Y+APEI+ G+ + VDWW+ G+ L+E+ G +PF G D E +I
Sbjct: 172 DAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 231
Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCT 223
+P+ + AKDL+ +L ++PE+RLG I+ HP F+ +NW L +
Sbjct: 232 MDNPFYPR--WLEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERKEI 286
Query: 224 TPPFVPP---PFNRELVSDESCPETP 246
PPF P PF+ E E P
Sbjct: 287 DPPFRPKVKSPFDCSNFDKEFLNEKP 312
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDL 29
GIVYRDLK +N+L+ DGHI + DF +
Sbjct: 138 GIVYRDLKLDNILLDKDGHIKIADFGM 164
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
+F GT EYLAPE++ +G VDWW LG+ ++E+ G PF DHE I+ +
Sbjct: 167 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 226
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNW--ALLRCTTPPF 227
FP+ + AK L++ LL KDP++RLG A + H FF +NW + + PPF
Sbjct: 227 FPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 284
Query: 228 VP 229
P
Sbjct: 285 KP 286
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS 44
+VYRD+K EN+++ DGHI +TDF L C + S+ +
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGL---CKEGISDGATMK 166
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
+F GT EYLAPE++ +G VDWW LG+ ++E+ G PF DHE I+ +
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNW--ALLRCTTPPF 227
FP+ + AK L++ LL KDP++RLG A + H FF +NW + + PPF
Sbjct: 224 FPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 281
Query: 228 VP 229
P
Sbjct: 282 KP 283
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS 44
+VYRD+K EN+++ DGHI +TDF L C + S+ +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGL---CKEGISDGATMK 163
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
+F GT EYLAPE++ +G VDWW LG+ ++E+ G PF DHE I+ +
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNW--ALLRCTTPPF 227
FP+ + AK L++ LL KDP++RLG A + H FF +NW + + PPF
Sbjct: 224 FPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 281
Query: 228 VP 229
P
Sbjct: 282 KP 283
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS 44
+VYRD+K EN+++ DGHI +TDF L C + S+ +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGL---CKEGISDGATMK 163
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
F GT EYLAPE++ +G VDWW LG+ ++E+ G PF DHE I+ + F
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNW--ALLRCTTPPFV 228
P+ + AK L++ LL KDP++RLG A + H FF +NW + + PPF
Sbjct: 225 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 282
Query: 229 P 229
P
Sbjct: 283 P 283
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS 44
+VYRD+K EN+++ DGHI +TDF L C + S+ +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGL---CKEGISDGATMK 163
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
F GT EYLAPE++ +G VDWW LG+ ++E+ G PF DHE I+ + F
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 229
Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNW--ALLRCTTPPFV 228
P+ + AK L++ LL KDP++RLG A + H FF +NW + + PPF
Sbjct: 230 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 287
Query: 229 P 229
P
Sbjct: 288 P 288
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS 44
+VYRD+K EN+++ DGHI +TDF L C + S+ +
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGL---CKEGISDGATMK 168
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
F GT EYLAPE++ +G VDWW LG+ ++E+ G PF DHE I+ + F
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNW--ALLRCTTPPFV 228
P+ + AK L++ LL KDP++RLG A + H FF +NW + + PPF
Sbjct: 225 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 282
Query: 229 P 229
P
Sbjct: 283 P 283
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS 44
+VYRD+K EN+++ DGHI +TDF L C + S+ +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGL---CKEGISDGATMK 163
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
F GT EYLAPE++ +G VDWW LG+ ++E+ G PF DHE I+ + F
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNW--ALLRCTTPPFV 228
P+ + AK L++ LL KDP++RLG A + H FF +NW + + PPF
Sbjct: 225 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 282
Query: 229 P 229
P
Sbjct: 283 P 283
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS 44
+VYRD+K EN+++ DGHI +TDF L C + S+ +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGL---CKEGISDGATMK 163
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 5/120 (4%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT +Y+APE+VS + + +DWW+ GI ++E+ G TPF + T I+ L FP
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP- 223
Query: 174 EPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--RCTTPPFVPP 230
P KDL+S+L+ +D +RLG+ + G +K+HP+F+ V W L R P+ PP
Sbjct: 224 -PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPP 282
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
V + F GT +Y+APEI++ + +G VDWW G+ L+E+ G PF G D + +I+
Sbjct: 497 VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCT 223
+ +PK + A A + L+ K P +RLG +G IK H FF+ ++W L +
Sbjct: 557 HNVAYPKSMSKEAVA--ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEI 614
Query: 224 TPPFVPPPFNR 234
PP+ P R
Sbjct: 615 QPPYKPKASGR 625
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 71/133 (53%), Gaps = 12/133 (9%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGS-------PVDWWTLGIFLFELFYGVTPFRGVDHEL 159
VRS+ VGT +YL+PEI+ G G DWW LG+F +E+FYG TPF
Sbjct: 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE 277
Query: 160 TLANIV--ARALEFPK-EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN 216
T IV L P + VP A+D I +LL PE RLG GA + HPFF G++
Sbjct: 278 TYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLGR-GGAGDFRTHPFFFGLD 335
Query: 217 WALLRCTTPPFVP 229
W LR + PPF P
Sbjct: 336 WDGLRDSVPPFTP 348
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNP 48
LG V+RD+KP+N+L+ GHI L DF LK + +++ P
Sbjct: 181 LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTP 227
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
V + F GT +Y+APEI++ + +G VDWW G+ L+E+ G PF G D + +I+
Sbjct: 176 VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCT 223
+ +PK + A A + L+ K P +RLG +G IK H FF+ ++W L +
Sbjct: 236 HNVAYPKSMSKEAVA--ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEI 293
Query: 224 TPPFVPPPFNR 234
PP+ P R
Sbjct: 294 QPPYKPKACGR 304
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 16/141 (11%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD----- 156
+ P D S +F GT Y+APEI+ GE +G VDWW LG+ +FE+ G +PF V
Sbjct: 204 LRPGDTTS-TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 262
Query: 157 ----HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS--TKGASAIKHHP 210
+ I+ + + P+ +V A + ++ L KDP+ RLG G + I+ HP
Sbjct: 263 DQNTEDYLFQVILEKQIRIPRSLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHP 320
Query: 211 FFQGVNWALL--RCTTPPFVP 229
FF+ V+W ++ + PPF P
Sbjct: 321 FFRNVDWDMMEQKQVVPPFKP 341
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 16/141 (11%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD----- 156
+ P D S F GT Y+APEI+ GE +G VDWW LG+ +FE+ G +PF V
Sbjct: 172 LRPGDTTS-XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 230
Query: 157 ----HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS--TKGASAIKHHP 210
+ I+ + + P+ +V A + ++ L KDP+ RLG G + I+ HP
Sbjct: 231 DQNTEDYLFQVILEKQIRIPRSMSVKAAS--VLKSFLNKDPKERLGCLPQTGFADIQGHP 288
Query: 211 FFQGVNWALL--RCTTPPFVP 229
FF+ V+W ++ + PPF P
Sbjct: 289 FFRNVDWDMMEQKQVVPPFKP 309
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 16/141 (11%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD----- 156
+ P D S F GT Y+APEI+ GE +G VDWW LG+ +FE+ G +PF V
Sbjct: 157 LRPGDTTS-XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 215
Query: 157 ----HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS--TKGASAIKHHP 210
+ I+ + + P+ +V A + ++ L KDP+ RLG G + I+ HP
Sbjct: 216 DQNTEDYLFQVILEKQIRIPRSLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHP 273
Query: 211 FFQGVNWALL--RCTTPPFVP 229
FF+ V+W ++ + PPF P
Sbjct: 274 FFRNVDWDMMEQKQVVPPFKP 294
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 16/141 (11%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD----- 156
+ P D S F GT Y+APEI+ GE +G VDWW LG+ +FE+ G +PF V
Sbjct: 161 LRPGDTTS-XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 219
Query: 157 ----HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS--TKGASAIKHHP 210
+ I+ + + P+ +V A + ++ L KDP+ RLG G + I+ HP
Sbjct: 220 DQNTEDYLFQVILEKQIRIPRSLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHP 277
Query: 211 FFQGVNWALL--RCTTPPFVP 229
FF+ V+W ++ + PPF P
Sbjct: 278 FFRNVDWDMMEQKQVVPPFKP 298
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
V + F GT +Y+APEI++ + +G VDWW G+ L+E+ G PF G D + +I+
Sbjct: 175 VTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 234
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCT 223
+ +PK ++ A + L+ K P +RLG +G ++ H FF+ ++W L R
Sbjct: 235 HNVSYPK--SLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREI 292
Query: 224 TPPFVP 229
PPF P
Sbjct: 293 QPPFKP 298
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ SFVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 185 ESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 245 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 221 RCTTPP 226
TPP
Sbjct: 303 HQQTPP 308
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 6/137 (4%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
V + +F GT +Y+APEI+ +G VDWW +G+ L+E+ G PF + + I+
Sbjct: 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRLGS--TKGASAIKHHPFFQGVNWALL--RC 222
+ +P AT ++ + K+P RLGS G AI HPFF+ ++WA L R
Sbjct: 239 DEVVYPTWLHEDATG--ILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQ 296
Query: 223 TTPPFVPPPFNRELVSD 239
PPF P +RE VS+
Sbjct: 297 IEPPFRPRIKSREDVSN 313
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L A
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA 244
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 245 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 221 RCTTPP 226
TPP
Sbjct: 303 HQQTPP 308
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ SFVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 182 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 241
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 242 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 299
Query: 221 RCTTPP 226
TPP
Sbjct: 300 HQQTPP 305
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ SFVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 186 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 245
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 246 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 303
Query: 221 RCTTPP 226
TPP
Sbjct: 304 HQQTPP 309
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L A
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA 244
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 245 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 221 RCTTPP 226
TPP
Sbjct: 303 HQQTPP 308
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 73/135 (54%), Gaps = 15/135 (11%)
Query: 113 VGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--A 166
VGT +Y++PE++ +G +G DWW++G+FLFE+ G TPF T + I+
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 295
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG--VNWALLRCTT 224
+L FP++ + AK+LI L D E RLG G IK HPFF+ NW +R T
Sbjct: 296 NSLCFPEDAEISKHAKNLICAFLT-DREVRLGRN-GVEEIKQHPFFKNDQWNWDNIRETA 353
Query: 225 PPFVPPPFNRELVSD 239
P VP EL SD
Sbjct: 354 APVVP-----ELSSD 363
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 26/36 (72%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSA 37
+G+++RD+KP+N+L+ GH+ L DF +K D++
Sbjct: 193 MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 228
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 10/137 (7%)
Query: 101 VVEPVDVRSMSFVGTHEYLAPEIVS----GEG-HGSPVDWWTLGIFLFELFYGVTPFRGV 155
++E V+S VGT +Y++PEI+ G+G +G DWW+LG+ ++E+ YG TPF
Sbjct: 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
Query: 156 DHELTLANIV--ARALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
T I+ +FP + V AKDLI +L+ E RLG G K HPFF
Sbjct: 285 SLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICS-REHRLGQN-GIEDFKKHPFF 342
Query: 213 QGVNWALLRCTTPPFVP 229
G++W +R P++P
Sbjct: 343 SGIDWDNIRNCEAPYIP 359
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
L V+RD+KP+N+L+ +GHI L DF LK
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ +FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 183 ESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 243 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 221 RCTTPP 226
TPP
Sbjct: 301 HQQTPP 306
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFD----LSLKCDDSASNAQIISDQNPPIAVLQNEYL 58
GI++RDLKPEN+L+ D HI +TDF LS + + +NA + + Q +L +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 59 VDHPPFTSASCIIPNCIV 76
+ CII +
Sbjct: 210 CKSSDLWALGCIIYQLVA 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 163 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 222
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 223 KIIKLEYDFP-EKFFPK-ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 280
Query: 221 RCTTPP 226
TPP
Sbjct: 281 HQQTPP 286
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 162 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 221
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 222 KIIKLEYDFP-EKFFPK-ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 279
Query: 221 RCTTPP 226
TPP
Sbjct: 280 HQQTPP 285
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 161 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 220
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 221 KIIKLEYDFP-EKFFPK-ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 278
Query: 221 RCTTPP 226
TPP
Sbjct: 279 HQQTPP 284
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 160 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 219
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 220 KIIKLEYDFP-EKFFPK-ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 277
Query: 221 RCTTPP 226
TPP
Sbjct: 278 HQQTPP 283
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
VR + VGT +Y++PE++ +G +G DWW++G+FL+E+ G TPF T +
Sbjct: 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 283
Query: 163 NIV--ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL- 219
I+ +L FP + + AK+LI L D E RLG G IK H FF+ WA
Sbjct: 284 KIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRN-GVEEIKRHLFFKNDQWAWE 341
Query: 220 -LRCTTPPFVP 229
LR T P VP
Sbjct: 342 TLRDTVAPVVP 352
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+G ++RD+KP+N+L+ GH+ L DF +K +
Sbjct: 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 219
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 182 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 241
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 242 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 299
Query: 221 RCTTPP 226
TPP
Sbjct: 300 HQQTPP 305
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
VR + VGT +Y++PE++ +G +G DWW++G+FL+E+ G TPF T +
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 163 NIV--ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL- 219
I+ +L FP + + AK+LI L D E RLG G IK H FF+ WA
Sbjct: 289 KIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRN-GVEEIKRHLFFKNDQWAWE 346
Query: 220 -LRCTTPPFVP 229
LR T P VP
Sbjct: 347 TLRDTVAPVVP 357
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+G ++RD+KP+N+L+ GH+ L DF +K +
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 224
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
VR + VGT +Y++PE++ +G +G DWW++G+FL+E+ G TPF T +
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 163 NIV--ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL- 219
I+ +L FP + + AK+LI L D E RLG G IK H FF+ WA
Sbjct: 289 KIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRN-GVEEIKRHLFFKNDQWAWE 346
Query: 220 -LRCTTPPFVP 229
LR T P VP
Sbjct: 347 TLRDTVAPVVP 357
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+G ++RD+KP+N+L+ GH+ L DF +K +
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 224
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 243 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 221 RCTTPP 226
TPP
Sbjct: 301 HQQTPP 306
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 167 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 226
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 227 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 284
Query: 221 RCTTPP 226
TPP
Sbjct: 285 HQQTPP 290
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 190 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 249
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 250 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 307
Query: 221 RCTTPP 226
TPP
Sbjct: 308 HQQTPP 313
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 243 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 221 RCTTPP 226
TPP
Sbjct: 301 HQQTPP 306
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 243 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 221 RCTTPP 226
TPP
Sbjct: 301 HQQTPP 306
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 188 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 247
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP A A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 248 KIIKLEYDFP--AAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 305
Query: 221 RCTTPP 226
TPP
Sbjct: 306 HQQTPP 311
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 245 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 221 RCTTPP 226
TPP
Sbjct: 303 HQQTPP 308
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 186 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 245
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 246 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 303
Query: 221 RCTTPP 226
TPP
Sbjct: 304 HQQTPP 309
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 245 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 221 RCTTPP 226
TPP
Sbjct: 303 HQQTPP 308
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
E R+ FVGT +Y++PE+++ + D W LG +++L G+ PFR + L
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
I+ +FP E P A+DL+ +LL D +RLG +G +K HPFF+ V W L
Sbjct: 245 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 221 RCTTPP 226
TPP
Sbjct: 303 HQQTPP 308
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 107 VRSMSFVGTHEYLAPEIVS----GEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
V+S VGT +Y++PEI+ G G +G DWW+LG+ ++E+ YG TPF T
Sbjct: 247 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 306
Query: 162 ANIV--ARALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA 218
I+ +FP V AKDLI +L+ ERRLG G K H FF+G+NW
Sbjct: 307 GKIMNHEERFQFPSHVTDVSEEAKDLIQRLICS-RERRLGQN-GIEDFKKHAFFEGLNWE 364
Query: 219 LLRCTTPPFVP 229
+R P++P
Sbjct: 365 NIRNLEAPYIP 375
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
L V+RD+KP+NVL+ +GHI L DF LK +D +
Sbjct: 210 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT 246
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 107 VRSMSFVGTHEYLAPEIVS----GEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
V+S VGT +Y++PEI+ G G +G DWW+LG+ ++E+ YG TPF T
Sbjct: 231 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 290
Query: 162 ANIV--ARALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA 218
I+ +FP V AKDLI +L+ ERRLG G K H FF+G+NW
Sbjct: 291 GKIMNHEERFQFPSHVTDVSEEAKDLIQRLICS-RERRLGQN-GIEDFKKHAFFEGLNWE 348
Query: 219 LLRCTTPPFVP 229
+R P++P
Sbjct: 349 NIRNLEAPYIP 359
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
L V+RD+KP+NVL+ +GHI L DF LK +D +
Sbjct: 194 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT 230
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
VGT Y+APE+V E + DWW LG L+E+ G +PF+ ++ + E P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 173 KEPA--VPATAKDLISQLLAKDPERRLGSTKG-ASAIKHHPFFQGVNWALLRCTT--PPF 227
+E + A+ L SQLL KDP RLG G A +K HP F+ +N+ L PPF
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 228 VPPP 231
P P
Sbjct: 466 KPDP 469
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIA-----VLQNEYL 58
IVYRDLKPEN+L+ GHI ++D L++ Q I + + V++NE
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAV----HVPEGQTIKGRVGTVGYMAPEVVKNERY 362
Query: 59 VDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKK 91
P + + C++ ++ S F+ ++K+ K+
Sbjct: 363 TFSPDWWALGCLLYE-MIAGQSPFQQRKKKIKR 394
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
VGT Y+APE+V E + DWW LG L+E+ G +PF+ ++ + E P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 173 KEPA--VPATAKDLISQLLAKDPERRLGSTKG-ASAIKHHPFFQGVNWALLRCTT--PPF 227
+E + A+ L SQLL KDP RLG G A +K HP F+ +N+ L PPF
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 228 VPPP 231
P P
Sbjct: 466 KPDP 469
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS-NAQIISDQNPPIAVLQNEYLVDHP 62
IVYRDLKPEN+L+ GHI ++D L++ + + ++ + V++NE P
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSP 366
Query: 63 PFTSASCIIPNCIVPAVSCFRPKRKRKKK 91
+ + C++ ++ S F+ ++K+ K+
Sbjct: 367 DWWALGCLLYE-MIAGQSPFQQRKKKIKR 394
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ + GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 192 VKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 310 KVEAPFIP 317
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ + GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 177 VKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 236
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 237 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQR 294
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 295 KVEAPFIP 302
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 177
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF + I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 101 VVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT 160
+ + V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWAL 219
IV+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 220 L--RCTTPPFVP 229
+ R PF+P
Sbjct: 305 IYQRKVEAPFIP 316
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+++ G+I +TDF L+ +
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV 191
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 101 VVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT 160
+ + V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWAL 219
IV+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 220 L--RCTTPPFVP 229
+ R PF+P
Sbjct: 305 IYQRKVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+++ G+I +TDF L+ +
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV 191
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 178 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 237
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 238 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 295
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 296 KVEAPFIP 303
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV 178
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 184 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 243
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 244 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 301
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 302 KVEAPFIP 309
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 184 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 243
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 244 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 301
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 302 KVEAPFIP 309
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 186 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 245
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 246 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 303
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 304 KVEAPFIP 311
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 155 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 186
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 310 KVEAPFIP 317
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
L ++YRDLKPEN+L+ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+++ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV 191
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 310 KVEAPFIP 317
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I + DF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 310 KVEAPFIP 317
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+++ G+I +TDF + +
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I + DF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 310 KVEAPFIP 317
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 310 KVEAPFIP 317
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 310 KVEAPFIP 317
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 310 KVEAPFIP 317
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I + DF + +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 192
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 310 KVEAPFIP 317
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+++ G+I +TDF + +
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+++ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV 191
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I + DF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+++ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 310 KVEAPFIP 317
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+++ G+I +TDF + +
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 310 KVEAPFIP 317
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+++ G+I +TDF + +
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 212 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 271
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 272 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 329
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 330 KVEAPFIP 337
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+++ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 212 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 271
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 272 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 329
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 330 KVEAPFIP 337
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++++ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 113 VGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFR----GVDHELTLANIVAR 167
VGTH Y+APE++ G + S DW++LG LF+L G +PFR HE+ +
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM- 409
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWAL--LRCTT 224
A+E P + + L+ LL +D RRLG +GA +K PFF+ ++W + L+
Sbjct: 410 AVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYP 467
Query: 225 PPFVPP 230
PP +PP
Sbjct: 468 PPLIPP 473
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
+VYRDLKP N+L+ GH+ ++ DL L CD S
Sbjct: 313 VVYRDLKPANILLDEHGHVRIS--DLGLACDFSKKK 346
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 113 VGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFR----GVDHELTLANIVAR 167
VGTH Y+APE++ G + S DW++LG LF+L G +PFR HE+ +
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM- 409
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWAL--LRCTT 224
A+E P + + L+ LL +D RRLG +GA +K PFF+ ++W + L+
Sbjct: 410 AVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYP 467
Query: 225 PPFVPP 230
PP +PP
Sbjct: 468 PPLIPP 473
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
+VYRDLKP N+L+ GH+ ++ DL L CD S
Sbjct: 313 VVYRDLKPANILLDEHGHVRIS--DLGLACDFSKKK 346
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 113 VGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFR----GVDHELTLANIVAR 167
VGTH Y+APE++ G + S DW++LG LF+L G +PFR HE+ +
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM- 408
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWAL--LRCTT 224
A+E P + + L+ LL +D RRLG +GA +K PFF+ ++W + L+
Sbjct: 409 AVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYP 466
Query: 225 PPFVPP 230
PP +PP
Sbjct: 467 PPLIPP 472
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
+VYRDLKP N+L+ GH+ ++ DL L CD S
Sbjct: 312 VVYRDLKPANILLDEHGHVRIS--DLGLACDFSKKK 345
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 113 VGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFR----GVDHELTLANIVAR 167
VGTH Y+APE++ G + S DW++LG LF+L G +PFR HE+ +
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM- 409
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWAL--LRCTT 224
A+E P + + L+ LL +D RRLG +GA +K PFF+ ++W + L+
Sbjct: 410 AVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYP 467
Query: 225 PPFVPP 230
PP +PP
Sbjct: 468 PPLIPP 473
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
+VYRDLKP N+L+ GH+ ++ DL L CD S
Sbjct: 313 VVYRDLKPANILLDEHGHVRIS--DLGLACDFSKKK 346
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 109 SMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
+ + GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF IV+
Sbjct: 216 TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 275
Query: 169 LEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--RCTTP 225
+ FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 276 VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEA 333
Query: 226 PFVP 229
PF+P
Sbjct: 334 PFIP 337
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + I +H +F +W + R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 310 KVEAPFIP 317
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAP I+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT EYLAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D + G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLA 162
++ + GT ++APE++ GE + VD++ LG+ L+E+ PFR V+++
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGA-SAIKHHPFFQGVNWALLR 221
++ +A+ +P + + PA+ KD LL KDPE+RLG G+ ++ HP F+ ++W L
Sbjct: 404 RVLEQAVTYPDKFS-PAS-KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLE 461
Query: 222 C--TTPPFVP 229
TPPFVP
Sbjct: 462 AGMLTPPFVP 471
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 24/29 (82%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
I+YRDLKPENVL+ DG++ ++D L+++
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVE 338
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLA 162
++ + GT ++APE++ GE + VD++ LG+ L+E+ PFR V+++
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGA-SAIKHHPFFQGVNWALLR 221
++ +A+ +P + + PA+ KD LL KDPE+RLG G+ ++ HP F+ ++W L
Sbjct: 404 RVLEQAVTYPDKFS-PAS-KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLE 461
Query: 222 C--TTPPFVP 229
TPPFVP
Sbjct: 462 AGMLTPPFVP 471
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 24/29 (82%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
I+YRDLKPENVL+ DG++ ++D L+++
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVE 338
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLA 162
++ + GT ++APE++ GE + VD++ LG+ L+E+ PFR V+++
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGA-SAIKHHPFFQGVNWALLR 221
++ +A+ +P + + PA+ KD LL KDPE+RLG G+ ++ HP F+ ++W L
Sbjct: 404 RVLEQAVTYPDKFS-PAS-KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLE 461
Query: 222 C--TTPPFVP 229
TPPFVP
Sbjct: 462 AGMLTPPFVP 471
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 24/29 (82%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
I+YRDLKPENVL+ DG++ ++D L+++
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVE 338
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLA 162
++ + GT ++APE++ GE + VD++ LG+ L+E+ PFR V+++
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGA-SAIKHHPFFQGVNWALLR 221
++ +A+ +P + + PA+ KD LL KDPE+RLG G+ ++ HP F+ ++W L
Sbjct: 404 RVLEQAVTYPDKFS-PAS-KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLE 461
Query: 222 C--TTPPFVP 229
TPPFVP
Sbjct: 462 AGMLTPPFVP 471
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 24/29 (82%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
I+YRDLKPENVL+ DG++ ++D L+++
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVE 338
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
V R+ GT E LAPEI+ +G+ VDWW LG+ ++E+ G PF I
Sbjct: 191 VKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
V+ + FP + KDL+ LL D +R G+ K G + IK+H +F +W + R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
PF+P
Sbjct: 309 KVEAPFIP 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
L ++YRDLKPEN+L+ G+I +TDF + +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
+R + GT +YL PE++ G H VD W +G+ +EL G PF H T IV
Sbjct: 176 LRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVK 235
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRL 197
L+FP +VP A+DLIS+LL +P RL
Sbjct: 236 VDLKFP--ASVPTGAQDLISKLLRHNPSERL 264
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ G + + DF S+ + D PP
Sbjct: 144 VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVD 203
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
I VL E LV +PPF SAS
Sbjct: 204 LWCIGVLCYELLVGNPPFESAS 225
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLAN+ A EF
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLAN+ A EF
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLAN+ A EF
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLAN+ A EF
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLAN+ A EF
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E A AKD I +LL KDP++R+
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRM 263
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLAN+ A EF
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLAN+ A EF
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLAN+ A EF
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLAN+ A EF
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLAN+ A EF
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLAN+ A EF
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E A AKD I +LL KDP++R+
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRM 263
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLAN+ A EF
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLAN+ A EF
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT ++APEIV+ E G D W++G+ + L G +PF G + TLAN+ A EF
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TL NI A +F +
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 232
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E AKD I +LL KDP+RR+
Sbjct: 233 EYFSNTSELAKDFIRRLLVKDPKRRM 258
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TL NI A +F +
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 253
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E AKD I +LL KDP+RR+
Sbjct: 254 EYFSNTSELAKDFIRRLLVKDPKRRM 279
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TL NI A +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 239
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E AKD I +LL KDP+RR+
Sbjct: 240 EYFSNTSELAKDFIRRLLVKDPKRRM 265
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLANI A + +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E AKD I +LL K+ +RL
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRL 265
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 4 IVYRDLKPENVLVRSDG----HIMLTDFDLSLKCDDSASNAQI 42
I + DLKPEN+++ HI L DF L+ + +D I
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLANI A + +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E AKD I +LL K+ +RL
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRL 265
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 4 IVYRDLKPENVLVRSDG----HIMLTDFDLSLKCDDSASNAQI 42
I + DLKPEN+++ HI L DF L+ + +D I
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLANI A + +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E AKD I +LL K+ +RL
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRL 265
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 4 IVYRDLKPENVLVRSDG----HIMLTDFDLSLKCDDSASNAQI 42
I + DLKPEN+++ HI L DF L+ + +D I
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
F GT YL+PE++ E +G PVD W G+ L+ L G PF D I A A +
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 224
Query: 171 F--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
F P+ V AK+LI+Q+L +P +R+ + + A+KH
Sbjct: 225 FPSPEWDTVTPEAKNLINQMLTINPAKRITAHE---ALKH 261
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 2 LGIVYRDLKPENVLVRSD---GHIMLTDFDLSLK 32
+G+V+RDLKPEN+L+ S + L DF L+++
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE 155
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 97 GPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD 156
G VE F GT YL+PE++ + +G PVD W G+ L+ L G PF D
Sbjct: 169 GLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED 228
Query: 157 HELTLANIVARALEF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
I A A +F P+ V AKDLI+++L +P +R+ + A A+KH
Sbjct: 229 QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITA---AEALKH 279
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 2 LGIVYRDLKPENVLVRSD---GHIMLTDFDLSLKCD 34
+G+V+RDLKPEN+L+ S + L DF L+++ +
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE 175
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
+R GT +YL PE++ G+ H VD W G+ +E G+ PF H T IV
Sbjct: 168 LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 227
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRL 197
L+FP P + +KDLIS+LL P +RL
Sbjct: 228 VDLKFP--PFLSDGSKDLISKLLRYHPPQRL 256
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ G + + DF S+ + D PP
Sbjct: 136 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVD 195
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
VL E+LV PPF S S
Sbjct: 196 LWCAGVLCYEFLVGMPPFDSPS 217
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
F GT YL+PE++ + +G PVD W G+ L+ L G PF D I A A +
Sbjct: 172 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 231
Query: 171 F--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
F P+ V AKDLI+++L +P +R+ + A A+KH
Sbjct: 232 FPSPEWDTVTPEAKDLINKMLTINPSKRITA---AEALKH 268
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 2 LGIVYRDLKPENVLVRSD---GHIMLTDFDLSLKCD 34
+G+V+R+LKPEN+L+ S + L DF L+++ +
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
+R GT +YL PE++ G+ H VD W G+ +E G+ PF H T IV
Sbjct: 167 LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 226
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRL 197
L+FP P + +KDLIS+LL P +RL
Sbjct: 227 VDLKFP--PFLSDGSKDLISKLLRYHPPQRL 255
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ G + + DF S+ + D PP
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVD 194
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
VL E+LV PPF S S
Sbjct: 195 LWCAGVLCYEFLVGMPPFDSPS 216
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
+R GT +YL PE++ G+ H VD W G+ +E G+ PF H T IV
Sbjct: 167 LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 226
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRL 197
L+FP P + +KDLIS+LL P +RL
Sbjct: 227 VDLKFP--PFLSDGSKDLISKLLRYHPPQRL 255
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ G + + DF S+ + D PP
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVD 194
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
VL E+LV PPF S S
Sbjct: 195 LWCAGVLCYEFLVGMPPFDSPS 216
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
F GT YL+PE++ + +G PVD W G+ L+ L G PF D I A A +F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 172 --PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
P+ V AKDLI+++L +P +R+ +++ A+KH
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRITASE---ALKH 261
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 3 GIVYRDLKPENVLVRSDGH---IMLTDFDLSLK 32
GIV+RDLKPEN+L+ S + L DF L+++
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIE 155
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
F GT YL+PE++ + +G PVD W G+ L+ L G PF D I A A +
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 224
Query: 171 F--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
F P+ V AKDLI+++L +P +R+ +++ A+KH
Sbjct: 225 FPSPEWDTVTPEAKDLINKMLTINPAKRITASE---ALKH 261
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 3 GIVYRDLKPENVLVRSDGH---IMLTDFDLSLK 32
GIV+RDLKPEN+L+ S + L DF L+++
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIE 155
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLANI + + +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E AKD I +LL K+ +RL
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRL 265
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 4 IVYRDLKPENVLVRSDG----HIMLTDFDLSLKCDDSASNAQI 42
I + DLKPEN+++ HI L DF L+ + +D I
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLANI + + +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E AKD I +LL K+ +RL
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRL 265
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 4 IVYRDLKPENVLVRSDG----HIMLTDFDLSLKCDDSASNAQI 42
I + DLKPEN+++ HI L DF L+ + +D I
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E++APEIV+ E G D W++G+ + L G +PF G + TLANI + + +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
E AKD I +LL K+ +RL
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRL 265
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 4 IVYRDLKPENVLVRSDG----HIMLTDFDLSLKCDDSASNAQI 42
I + DLKPEN+++ HI L DF L+ + +D I
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 110 MSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
F GT YL+PE++ + +G PVD W G+ L+ L G PF D I A A
Sbjct: 191 FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAY 250
Query: 170 EF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
+F P+ V AK+LI+Q+L +P +R+ + + A+KH
Sbjct: 251 DFPSPEWDTVTPEAKNLINQMLTINPAKRITADQ---ALKH 288
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Query: 4 IVYRDLKPENVLVRSD---GHIMLTDFDLSLK 32
IV+RDLKPEN+L+ S + L DF L+++
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIE 182
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 188 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 248 EFTFPD--FVTEGARDLISRLLKHNPSQR 274
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 214
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 215 LWSLGVLCYEFLVGKPPFEANT 236
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 179 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 238
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 239 EFTFP--DFVTEGARDLISRLLKHNPSQR 265
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 146 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 205
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 206 LWSLGVLCYEFLVGKPPFEANT 227
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 114 GTHEYLAPEIVSGE------GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
GT YLAPEI+ G+G VD W G+ LF L G PF L L I+
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEG 320
Query: 168 ALEF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
+F P+ +T KDLIS+LL DPE RL + + HPFF+
Sbjct: 321 QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQAL----QHPFFE 364
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
IV+RDLKPEN+L+ + I L+DF S
Sbjct: 220 NIVHRDLKPENILLDDNMQIRLSDFGFS 247
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 164 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 224 EFTFP--DFVTEGARDLISRLLKHNPSQR 250
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + +F S+ S + D PP
Sbjct: 131 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 190
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 191 LWSLGVLCYEFLVGKPPFEANT 212
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 162 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 222 EFTFPD--FVTEGARDLISRLLKHNPSQR 248
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANT 210
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 225 EFTFP--DFVTEGARDLISRLLKHNPSQR 251
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANT 213
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 167 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 227 EFTFP--DFVTEGARDLISRLLKHNPSQR 253
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANT 215
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 167 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 227 EFTFP--DFVTEGARDLISRLLKHNPSQR 253
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANT 215
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
+GT EYLAPEI++ + + D W +GI + L +PF G D++ T NI +++
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 172 PKE--PAVPATAKDLISQLLAKDPERR 196
+E +V A D I LL K+PE+R
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKR 279
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 3 GIVYRDLKPENVLVRSD---GHIMLTDFDLSLK 32
IV+ DLKP+N+L+ S G I + DF +S K
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK 183
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 225 EFTFP--DFVTEGARDLISRLLKHNPSQR 251
Score = 33.9 bits (76), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + +F S+ S + D PP
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANT 213
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 163 RRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 223 EFTFP--DFVTEGARDLISRLLKHNPSQR 249
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 21/84 (25%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS---DQNPP----------- 49
+++RD+KPEN+L+ S G + + DF S C +S +S D PP
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEK 187
Query: 50 -----IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANT 211
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 165 RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 225 EFTFP--DFVTEGARDLISRLLKHNPSQR 251
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 17/80 (21%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S A + D PP
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVD 191
Query: 50 ---IAVLQNEYLVDHPPFTS 66
+ VL E+LV PPF +
Sbjct: 192 LWSLGVLCYEFLVGKPPFEA 211
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 162 RRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 222 EFTFPD--FVTEGARDLISRLLKHNPSQR 248
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVD 188
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANT 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 161 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 220
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 221 EFTFPD--FVTEGARDLISRLLKHNPSQR 247
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 187
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 188 LWSLGVLCYEFLVGKPPFEANT 209
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 225 EFTFP--DFVTEGARDLISRLLKHNPSQR 251
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANT 213
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 166 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 225
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 226 EFTFPD--FVTEGARDLISRLLKHNPSQR 252
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 133 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 193 LWSLGVLCYEFLVGKPPFEANT 214
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 223 EFTFP--DFVTEGARDLISRLLKHNPSQR 249
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 189
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 190 LWSLGVLCYEFLVGKPPFEANT 211
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 162 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 222 EFTFP--DFVTEGARDLISRLLKHNPSQR 248
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANT 210
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 159 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 218
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 219 EFTFPD--FVTEGARDLISRLLKHNPSQR 245
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 185
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 186 LWSLGVLCYEFLVGKPPFEANT 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 167 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 227 EFTFP--DFVTEGARDLISRLLKHNPSQR 253
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANT 215
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 164 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 224 EFTFP--DFVTEGARDLISRLLKHNPSQR 250
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 131 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVD 190
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 191 LWSLGVLCYEFLVGKPPFEANT 212
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 162 RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 222 EFTFPD--FVTEGARDLISRLLKHNPSQR 248
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S A + D PP
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVD 188
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANT 210
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE + G H VD W+LG+ +E G PF ++ T I
Sbjct: 167 RRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 227 EFTFP--DFVTEGARDLISRLLKHNPSQR 253
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVD 193
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANT 215
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 162 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 222 EFTFP--DFVTEGARDLISRLLKHNPSQR 248
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANT 210
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 167 RRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 227 EFTFP--DFVTEGARDLISRLLKHNPSQR 253
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVD 193
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANT 215
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 188 RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 248 EFTFPD--FVTEGARDLISRLLKHNPSQR 274
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + + D PP
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVD 214
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 215 LWSLGVLCYEFLVGKPPFEANT 236
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G+ PF ++ T I
Sbjct: 166 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV 225
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRL 197
FP V A+DLIS+LL + +RL
Sbjct: 226 EFTFPD--FVTEGARDLISRLLKHNASQRL 253
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S+G + + DF S+ S + D PP
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 193 LWSLGVLCYEFLVGMPPFEAHT 214
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 163 RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 223 EFTFP--DFVTEGARDLISRLLKHNPSQR 249
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + + D PP
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVD 189
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 190 LWSLGVLCYEFLVGKPPFEANT 211
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 162 RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 222 EFTFP--DFVTEGARDLISRLLKHNPSQR 248
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S A + D PP
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVD 188
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANT 210
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
VGT ++APE+V E +G PVD W G+ LF L G PF G L I + P
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 255
Query: 173 KE-PAVPATAKDLISQLLAKDPERRL 197
++ + +AKDL+ ++L DP R+
Sbjct: 256 RQWSHISESAKDLVRRMLMLDPAERI 281
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
VGT ++APE+V E +G PVD W G+ LF L G PF G L I + P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 253
Query: 173 KE-PAVPATAKDLISQLLAKDPERRL 197
++ + +AKDL+ ++L DP R+
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERI 279
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 165 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 225 EFTFP--DFVTEGARDLISRLLKHNPSQR 251
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANT 213
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
VGT ++APE+V E +G PVD W G+ LF L G PF G L I + P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 253
Query: 173 KEPA-VPATAKDLISQLLAKDPERRL 197
++ + + +AKDL+ ++L DP R+
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERI 279
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 4 IVYRDLKPENVLVRSDGH---IMLTDFDLSLKCDDSA 37
I++RD+KPENVL+ S + + L DF ++++ +S
Sbjct: 151 IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG 187
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 162 RRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 222 EFTFPD--FVTEGARDLISRLLKHNPSQR 248
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANT 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 162 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 222 EFTFPD--FVTEGARDLISRLLKHNPSQR 248
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + D PP
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANT 210
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
T E+ APEIV E G D W +G+ + L G++PF G D TL N+ EF
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 270
Query: 173 KEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
++ +V AKD I LL K+P +RL HP+ +G
Sbjct: 271 EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE----HPWLKG 310
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT +YL PE++ G H VD W+LG+ +E G+ PF ++ T I
Sbjct: 166 RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV 225
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRL 197
FP V A+DLIS+LL + +RL
Sbjct: 226 EFTFP--DFVTEGARDLISRLLKHNASQRL 253
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S+G + + DF S+ S + + D PP
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 193 LWSLGVLCYEFLVGMPPFEAHT 214
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 111 SFVGTHEYLAPEIVSGE------GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
S GT YLAPEI+ G+G VD W+ G+ ++ L G PF L L I
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 241
Query: 165 VARALEF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
++ +F P+ T KDL+S+ L P++R + + + HPFFQ
Sbjct: 242 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA----HPFFQ 288
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
L IV+RDLKPEN+L+ D +I LTDF S + D
Sbjct: 143 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT +YL PE++ G H VD W+LG+ +E G PF ++ T I
Sbjct: 165 RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
FP V A+DLIS+LL +P +R
Sbjct: 225 EFTFPD--FVTEGARDLISRLLKHNPSQR 251
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 17/82 (20%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS-DQNPP------------- 49
+++RD+KPEN+L+ S G + + DF S+ S + + D PP
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 50 ---IAVLQNEYLVDHPPFTSAS 68
+ VL E+LV PPF + +
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANT 213
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
GT E+LAPE+V+ + P D W++G+ + L G++PF G + TL NI+A +
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 174 E--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
E + AK+ IS+LL K+ R+ +++ A+KH
Sbjct: 310 EEFQDISEEAKEFISKLLIKEKSWRISASE---ALKH 343
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
+ + GT Y++PEI + HG D W+LG + L G PF + TL +V
Sbjct: 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
E P ++ AKDLI QLL ++P RL S++ HPF
Sbjct: 228 DYEMPSFLSIE--AKDLIHQLLRRNPADRL----SLSSVLDHPFM 266
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 114 GTHEYLAPEIVSGE------GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
GT YLAPEI+ G+G VD W+ G+ ++ L G PF L L I++
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 231
Query: 168 ALEF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
+F P+ T KDL+S+ L P++R + + + HPFFQ
Sbjct: 232 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA----HPFFQ 275
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
L IV+RDLKPEN+L+ D +I LTDF S + D
Sbjct: 130 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 162
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 114 GTHEYLAPEIVSGE------GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
GT YLAPEI+ G+G VD W+ G+ ++ L G PF L L I++
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 244
Query: 168 ALEF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
+F P+ T KDL+S+ L P++R + + + HPFFQ
Sbjct: 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA----HPFFQ 288
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
L IV+RDLKPEN+L+ D +I LTDF S + D
Sbjct: 143 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 113 VGTHEYLAPEIVSGEGH---GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
VGT ++APE +S G +D W +G+ L+ +G PF + I ++AL
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL 257
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
EFP +P + KDLI+++L K+PE R+ IK HP+
Sbjct: 258 EFPDQPDIAEDLKDLITRMLDKNPESRI----VVPEIKLHPW 295
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
I++RD+KP N+LV DGHI + DF +S
Sbjct: 158 IIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
F GT YL+PE++ + + PVD W G+ L+ L G PF D A I A A ++
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 225
Query: 172 --PKEPAVPATAKDLISQLLAKDPERRLGSTKG 202
P+ V AK LI +L +P++R+ + +
Sbjct: 226 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQA 258
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Query: 3 GIVYRDLKPENVLVRSDGH---IMLTDFDLSLKCDDSAS 38
GIV+R+LKPEN+L+ S + L DF L+++ +DS +
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 162
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
F GT YL+PE++ + + PVD W G+ L+ L G PF D A I A A ++
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 172 --PKEPAVPATAKDLISQLLAKDPERRLGSTKG 202
P+ V AK LI +L +P++R+ + +
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQA 259
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Query: 3 GIVYRDLKPENVLVRSDGH---IMLTDFDLSLKCDDSAS 38
GIV+R+LKPEN+L+ S + L DF L+++ +DS +
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
F GT YL+PE++ + + PVD W G+ L+ L G PF D A I A A ++
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 172 --PKEPAVPATAKDLISQLLAKDPERRLGSTKG 202
P+ V AK LI +L +P++R+ + +
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQA 259
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Query: 3 GIVYRDLKPENVLVRSDGH---IMLTDFDLSLKCDDSAS 38
GIV+R+LKPEN+L+ S + L DF L+++ +DS +
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Query: 115 THEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF-RGVDH--ELTLANIVARALEF 171
T ++APE++ +G+ + D W+LG+ L+ + G TPF G D E LA I +
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 172 PKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL 220
+V TAKDL+S++L DP +RL A+ + HP+ V+W L
Sbjct: 243 SGGYWNSVSDTAKDLVSKMLHVDPHQRL----TAALVLRHPWI--VHWDQL 287
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
F GT YL+PE++ + + PVD W G+ L+ L G PF D A I A A ++
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 249
Query: 172 --PKEPAVPATAKDLISQLLAKDPERRL 197
P+ V AK LI +L +P++R+
Sbjct: 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 277
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Query: 3 GIVYRDLKPENVLVRSDGH---IMLTDFDLSLKCDDS 36
GIV+R+LKPEN+L+ S + L DF L+++ +DS
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 115 THEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT-------LANIVAR 167
T Y APE+++ G+ D W+LG+ L+ + G PF+ D LT + I
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 168 ALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
F E V AKDLI LL DP +RL S ++++ + Q
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL----KMSGLRYNEWLQ 275
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Query: 2 LGIVYRDLKPENVLVRSDG---HIMLTDFDLS 30
+G+V+RDLKPEN+L + I + DF +
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFA 156
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 26/123 (21%)
Query: 114 GTHEYLAPEIVSGEGHGSPV-----DWWTLGIFLFELFYGVTPFRG-------------- 154
G+ EY+APE+V + + D W+LG+ L+ L G PF G
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 155 -VDHELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
+ +I EFP + + AKDLIS+LL +D ++RL A+ + HP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL----SAAQVLQHPW 298
Query: 212 FQG 214
QG
Sbjct: 299 VQG 301
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Query: 3 GIVYRDLKPENVLVRSDGH---IMLTDFDLS 30
GI +RDLKPEN+L + + DFDL
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 26/123 (21%)
Query: 114 GTHEYLAPEIVSGEGHGSPV-----DWWTLGIFLFELFYGVTPFRG-------------- 154
G+ EY+APE+V + + D W+LG+ L+ L G PF G
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 155 -VDHELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
+ +I EFP + + AKDLIS+LL +D ++RL A+ + HP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL----SAAQVLQHPW 298
Query: 212 FQG 214
QG
Sbjct: 299 VQG 301
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
Query: 104 PVDVRSMSFVGTHEYLAPEIVS---GEGHGSPVDWWTLGIFLFELFYGVTPFR---GVDH 157
P + + + GT Y+APE+ S G G+ VDWW+LG+ +EL G P+
Sbjct: 166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
Query: 158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW 217
+ + + +P A L+ +LL +P++R S +++ P+ +NW
Sbjct: 226 KEIVHTFETTVVTYP--SAWSQEMVSLLKKLLEPNPDQRFSQ---LSDVQNFPYMNDINW 280
Query: 218 --ALLRCTTPPFVP 229
+ P F+P
Sbjct: 281 DAVFQKRLIPGFIP 294
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 23/27 (85%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
I++RD+KP+N+L+ GH+ +TDF+++
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIA 162
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 78/218 (35%), Gaps = 79/218 (36%)
Query: 2 LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYL 58
LGIV+RDLKPEN+L S D IM++DF LS K +D P +VL
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMED-------------PGSVL----- 175
Query: 59 VDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEY 118
S +C P + P V +P
Sbjct: 176 -------STACGTPGYVAPEVLAQKP---------------------------------- 194
Query: 119 LAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF--PKEPA 176
+ VD W++G+ + L G PF + I+ EF P
Sbjct: 195 ----------YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD 244
Query: 177 VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
+ +AKD I L+ KDPE+R + HP+ G
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 78/218 (35%), Gaps = 79/218 (36%)
Query: 2 LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYL 58
LGIV+RDLKPEN+L S D IM++DF LS K +D P +VL
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMED-------------PGSVL----- 175
Query: 59 VDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEY 118
S +C P + P V +P K
Sbjct: 176 -------STACGTPGYVAPEVLAQKPYSK------------------------------- 197
Query: 119 LAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF--PKEPA 176
VD W++G+ + L G PF + I+ EF P
Sbjct: 198 -------------AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD 244
Query: 177 VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
+ +AKD I L+ KDPE+R + HP+ G
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 78/218 (35%), Gaps = 79/218 (36%)
Query: 2 LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYL 58
LGIV+RDLKPEN+L S D IM++DF LS K +D P +VL
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMED-------------PGSVL----- 175
Query: 59 VDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEY 118
S +C P + P V +P K
Sbjct: 176 -------STACGTPGYVAPEVLAQKPYSK------------------------------- 197
Query: 119 LAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF--PKEPA 176
VD W++G+ + L G PF + I+ EF P
Sbjct: 198 -------------AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD 244
Query: 177 VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
+ +AKD I L+ KDPE+R + HP+ G
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 78/218 (35%), Gaps = 79/218 (36%)
Query: 2 LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYL 58
LGIV+RDLKPEN+L S D IM++DF LS K +D P +VL
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMED-------------PGSVL----- 175
Query: 59 VDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEY 118
S +C P + P V +P K
Sbjct: 176 -------STACGTPGYVAPEVLAQKPYSK------------------------------- 197
Query: 119 LAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF--PKEPA 176
VD W++G+ + L G PF + I+ EF P
Sbjct: 198 -------------AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD 244
Query: 177 VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
+ +AKD I L+ KDPE+R + HP+ G
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 115 THEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF-RGVDH--ELTLANIVARALEF 171
T ++APE++ +G+ + D W+LG+ L+ G TPF G D E LA I +
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 172 PKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL 220
+V TAKDL+S+ L DP +RL A+ + HP+ V+W L
Sbjct: 243 SGGYWNSVSDTAKDLVSKXLHVDPHQRL----TAALVLRHPWI--VHWDQL 287
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT Y+APE++S +GH VD W++G ++ L G PF + T I
Sbjct: 177 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 236
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
PK + A LI ++L DP R
Sbjct: 237 EYSIPKH--INPVAASLIQKMLQTDPTAR 263
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 115 THEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV-----DHELTLANIVARAL 169
T ++APE++ +G+ D W+LGI L+ + G TPF + LT L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
V TAKDL+S++L DP +RL A + HP+
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRL----TAKQVLQHPW 285
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 115 THEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV-----DHELTLANIVARAL 169
T ++APE++ +G+ D W+LGI L+ + G TPF + LT L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
V TAKDL+S++L DP +RL A + HP+
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRL----TAKQVLQHPW 285
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT Y+APE++S +GH VD W++G ++ L G PF + T I
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
PK + A LI ++L DP R
Sbjct: 233 EYSIPKH--INPVAASLIQKMLQTDPTAR 259
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT Y+APE++S +GH VD W++G ++ L G PF + T I
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
PK + A LI ++L DP R
Sbjct: 233 EYSIPKH--INPVAASLIQKMLQTDPTAR 259
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
DV S + GT Y+APE+++ + + VD W++G+ + L G PF + I+
Sbjct: 177 DVMSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQIL 235
Query: 166 ARALEF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
EF P + +AKD I L+ KDP +R + A HP+ G
Sbjct: 236 KAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAA----RHPWIAG 282
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--RALE 170
GT E+ APE+ G+ G D W++G+ + L G++PF G + + TL N+ + ++
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRL 197
+ KD I +LL DP R+
Sbjct: 271 DSAFSGISEDGKDFIRKLLLADPNTRM 297
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 114 GTHEYLAPEIV--SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
GT ++APE++ + E +G D W+ G+ L L G PF GV+ T++ ++ + L F
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF 295
Query: 172 --PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
P + A+DL+S LL ++ + R + + A++H
Sbjct: 296 ENPNYNVLSPLARDLLSNLLNRNVDERFDAMR---ALQH 331
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 3 GIVYRDLKPENVLVRSDG--HIMLTDFDLS 30
GI +RD+KPEN L ++ I L DF LS
Sbjct: 188 GICHRDIKPENFLFSTNKSFEIKLVDFGLS 217
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--RALE 170
GT E+ APE+ G+ G D W++G+ + L G++PF G + + TL N+ + ++
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRL 197
+ KD I +LL DP R+
Sbjct: 377 DSAFSGISEDGKDFIRKLLLADPNTRM 403
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF-- 171
GT Y+APE+++ + + VD W++G+ + L G PF I EF
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFES 228
Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTP 225
P + +AKD I LL KDP R K S HP+ G N AL R P
Sbjct: 229 PFWDDISESAKDFICHLLEKDPNERYTCEKALS----HPWIDG-NTALHRDIYP 277
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT Y+APE++S +GH VD W++G ++ L G PF + T I
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 254
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
PK + A LI ++L DP R
Sbjct: 255 EYSIPKH--INPVAASLIQKMLQTDPTAR 281
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT Y+APE++S +GH VD W++G ++ L G PF + T I
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 256
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
PK + A LI ++L DP R
Sbjct: 257 EYSIPKH--INPVAASLIQKMLQTDPTAR 283
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 26/123 (21%)
Query: 114 GTHEYLAPEIV-----SGEGHGSPVDWWTLGIFLFELFYGVTPFRG-------------- 154
G+ EY+APE+V + D W+LG+ L+ + G PF G
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVC 242
Query: 155 -VDHELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
V +I EFP + + + AKDLIS+LL +D ++RL A+ + HP+
Sbjct: 243 RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRL----SAAQVLQHPW 298
Query: 212 FQG 214
QG
Sbjct: 299 VQG 301
Score = 30.8 bits (68), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 3 GIVYRDLKPENVLVRSDGH---IMLTDFDL--SLKCDDSAS 38
GI +RDLKPEN+L S + + DFDL +K ++S +
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCT 171
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF- 171
+GT Y+APE++ + + D W++G+ LF L G PF G + L + F
Sbjct: 199 LGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
P+ V AKDLI Q+L D +RR+ + + A++H
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQ---ALEH 292
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 23/125 (18%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEG--HGSPVDWWTLGIFLFELFYGVTPFR-GVDHELTL 161
VD + GT+E++ PE S E +G+ VD W+LGI L+ +FY V PF +
Sbjct: 203 VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262
Query: 162 ANIVARALEFPKEPA---VPATAK--------------DLISQLLAKDPERRLGSTKGAS 204
NI + +E+P + P T K D + L K+P R+ S
Sbjct: 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITS---ED 319
Query: 205 AIKHH 209
A+KH
Sbjct: 320 ALKHE 324
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT Y+APE++S +GH VD W++G ++ L G PF + T I
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 230
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
PK + A LI ++L DP R
Sbjct: 231 EYSIPKH--INPVAASLIQKMLQTDPTAR 257
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF---RGVDHELTLANIVARALE 170
GT Y APEI+ G +G VD W++GI + L G PF RG + I+
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG--DQFMFRRILNCEYY 269
Query: 171 F--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
F P V AKDL+ +L+ DP++RL + + HP+ G
Sbjct: 270 FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQAL----QHPWVTG 311
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 77/216 (35%), Gaps = 80/216 (37%)
Query: 3 GIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLV 59
IV+RDLKPEN+L+ S D I + DF LS
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLS----------------------------- 171
Query: 60 DHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYL 119
+CF+ K K + G T Y+
Sbjct: 172 --------------------TCFQQNTKMKDRIG---------------------TAYYI 190
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--RALEFPKEPAV 177
APE++ G + D W+ G+ L+ L G PF G + L + A + P+ +
Sbjct: 191 APEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 178 PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
AKDLI ++L P R+ +T+ HP+ Q
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCLE----HPWIQ 281
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + GT Y+APE++ +GH VD W+LG L+ L G PF + T I
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
P+ + A LI ++L DP R
Sbjct: 258 EYSVPRH--INPVASALIRRMLHADPTLR 284
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 77/216 (35%), Gaps = 80/216 (37%)
Query: 3 GIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLV 59
IV+RDLKPEN+L+ S D I + DF LS
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLS----------------------------- 171
Query: 60 DHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYL 119
+CF+ K K + G T Y+
Sbjct: 172 --------------------TCFQQNTKMKDRIG---------------------TAYYI 190
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--RALEFPKEPAV 177
APE++ G + D W+ G+ L+ L G PF G + L + A + P+ +
Sbjct: 191 APEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 178 PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
AKDLI ++L P R+ +T+ HP+ Q
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCL----EHPWIQ 281
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 77/216 (35%), Gaps = 80/216 (37%)
Query: 3 GIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLV 59
IV+RDLKPEN+L+ S D I + DF LS
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLS----------------------------- 171
Query: 60 DHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYL 119
+CF+ K K + G T Y+
Sbjct: 172 --------------------TCFQQNTKMKDRIG---------------------TAYYI 190
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--RALEFPKEPAV 177
APE++ G + D W+ G+ L+ L G PF G + L + A + P+ +
Sbjct: 191 APEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 178 PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
AKDLI ++L P R+ +T+ HP+ Q
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCL----EHPWIQ 281
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT Y+APE++ +GH VD W+LG L+ L G PF + T I
Sbjct: 198 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
P+ + A LI ++L DP R
Sbjct: 258 EYSVPRH--INPVASALIRRMLHADPTLR 284
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT Y+APE++ +GH VD W+LG L+ L G PF + T I
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
P+ + A LI ++L DP R
Sbjct: 258 EYSVPRH--INPVASALIRRMLHADPTLR 284
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R GT Y+APE++ +GH VD W+LG L+ L G PF + T I
Sbjct: 182 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 241
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
P+ + A LI ++L DP R
Sbjct: 242 EYSVPRH--INPVASALIRRMLHADPTLR 268
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
D S + GT Y+APE+ + D W+ G+ ++ L G PF G E
Sbjct: 180 DEHSTNAAGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT 238
Query: 166 ARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
+ + E P P A DL+ Q+L KDPERR A+ + HH +F+
Sbjct: 239 YKEPNYAVECRPLTP-QAVDLLKQMLTKDPERR----PSAAQVLHHEWFK 283
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Query: 4 IVYRDLKPENVLVRSDG-H--IMLTDFDLS--LKCDDSASNA 40
+V++DLKPEN+L + H I + DF L+ K D+ ++NA
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA 186
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALE 170
+GT Y+APE++ G + D W+ G+ L+ L G PF G + L + E
Sbjct: 195 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 253
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGS 199
P+ V +AKDLI ++L P R+ +
Sbjct: 254 LPQWKKVSESAKDLIRKMLTYVPSMRISA 282
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 3/30 (10%)
Query: 4 IVYRDLKPENVLVRS---DGHIMLTDFDLS 30
IV+RDLKPEN+L+ S D +I + DF LS
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLS 182
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 36/87 (41%)
Query: 110 MSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
MS G + ++APE++ D W+ G+ L+EL G PFRG+D + L
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKL 231
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERR 196
P P L+ DP R
Sbjct: 232 ALPIPSTCPEPFAKLMEDCWNPDPHSR 258
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALE 170
+GT Y+APE++ G + D W+ G+ L+ L G PF G + L + E
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGS 199
P+ V +AKDLI ++L P R+ +
Sbjct: 248 LPQWKKVSESAKDLIRKMLTYVPSMRISA 276
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 3/30 (10%)
Query: 4 IVYRDLKPENVLVRS---DGHIMLTDFDLS 30
IV+RDLKPEN+L+ S D +I + DF LS
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLS 176
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALE 170
+GT Y+APE++ G + D W+ G+ L+ L G PF G + L + E
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 270
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGS 199
P+ V +AKDLI ++L P R+ +
Sbjct: 271 LPQWKKVSESAKDLIRKMLTYVPSMRISA 299
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 3/30 (10%)
Query: 4 IVYRDLKPENVLVRS---DGHIMLTDFDLS 30
IV+RDLKPEN+L+ S D +I + DF LS
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLS 199
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALE 170
+GT Y+APE++ G + D W+ G+ L+ L G PF G + L + E
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 271
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGS 199
P+ V +AKDLI ++L P R+ +
Sbjct: 272 LPQWKKVSESAKDLIRKMLTYVPSMRISA 300
Score = 33.9 bits (76), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 3/30 (10%)
Query: 4 IVYRDLKPENVLVRS---DGHIMLTDFDLS 30
IV+RDLKPEN+L+ S D +I + DF LS
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLS 200
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 111 SFVGTHEYLAPEI---VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVA 166
+ GT YLAPE+ V G+ VD W+LG+ LF G PF +++L + I +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 167 RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
F E V A DL+ +LL DP+ R + + HP+ Q
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 279
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Query: 3 GIVYRDLKPENVLVRS---DGHIMLTDF 27
GI++RDLKPENVL+ S D I +TDF
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDF 161
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 111 SFVGTHEYLAPEI---VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVA 166
+ GT YLAPE+ V G+ VD W+LG+ LF G PF +++L + I +
Sbjct: 174 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 233
Query: 167 RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
F E V A DL+ +LL DP+ R + + HP+ Q
Sbjct: 234 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 278
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Query: 3 GIVYRDLKPENVLVRS---DGHIMLTDF 27
GI++RDLKPENVL+ S D I +TDF
Sbjct: 133 GIIHRDLKPENVLLSSQEEDCLIKITDF 160
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 111 SFVGTHEYLAPEI---VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVA 166
+ GT YLAPE+ V G+ VD W+LG+ LF G PF +++L + I +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 167 RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
F E V A DL+ +LL DP+ R + + HP+ Q
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 279
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Query: 3 GIVYRDLKPENVLVRS---DGHIMLTDF 27
GI++RDLKPENVL+ S D I +TDF
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDF 161
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 111 SFVGTHEYLAPEI---VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVA 166
+ GT YLAPE+ V G+ VD W+LG+ LF G PF +++L + I +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 167 RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
F E V A DL+ +LL DP+ R + + HP+ Q
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 279
Score = 33.9 bits (76), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Query: 3 GIVYRDLKPENVLVRS---DGHIMLTDF 27
GI++RDLKPENVL+ S D I +TDF
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDF 161
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 111 SFVGTHEYLAPEI---VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVA 166
+ GT YLAPE+ V G+ VD W+LG+ LF G PF +++L + I +
Sbjct: 314 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 373
Query: 167 RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
F E V A DL+ +LL DP+ R + + HP+ Q
Sbjct: 374 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 418
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Query: 3 GIVYRDLKPENVLVRS---DGHIMLTDF 27
GI++RDLKPENVL+ S D I +TDF
Sbjct: 273 GIIHRDLKPENVLLSSQEEDCLIKITDF 300
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 111 SFVGTHEYLAPEI---VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVA 166
+ GT YLAPE+ V G+ VD W+LG+ LF G PF +++L + I +
Sbjct: 300 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 359
Query: 167 RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
F E V A DL+ +LL DP+ R + + HP+ Q
Sbjct: 360 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 404
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Query: 3 GIVYRDLKPENVLVRS---DGHIMLTDF 27
GI++RDLKPENVL+ S D I +TDF
Sbjct: 259 GIIHRDLKPENVLLSSQEEDCLIKITDF 286
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 111 SFVGTHEYLAPEI---VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVA 166
+ GT YLAPE+ V G+ VD W+LG+ LF G PF +++L + I +
Sbjct: 181 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 240
Query: 167 RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
F E V A DL+ +LL DP+ R + + HP+ Q
Sbjct: 241 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 285
Score = 33.9 bits (76), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Query: 3 GIVYRDLKPENVLVRS---DGHIMLTDF 27
GI++RDLKPENVL+ S D I +TDF
Sbjct: 140 GIIHRDLKPENVLLSSQEEDCLIKITDF 167
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
+ P + + VGT ++APE+V+ + +G VD W+LGI E+ G P+ + L
Sbjct: 167 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 226
Query: 162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
I E + A +D +++ L D E+R GS K + H F +
Sbjct: 227 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR-GSAK---ELIQHQFLK 275
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 19/24 (79%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDF 27
+++R++K +N+L+ DG + LTDF
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDF 161
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
+ P + + VGT ++APE+V+ + +G VD W+LGI E+ G P+ + L
Sbjct: 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
I E + A +D +++ L D E+R GS K + H F +
Sbjct: 226 YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR-GSAK---ELLQHQFLK 274
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDF 27
+++RD+K +N+L+ DG + LTDF
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDF 160
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 44/141 (31%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR---- 167
+V T Y APE++ G G+ + VD W++G + EL G F+G DH ++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTP 244
Query: 168 ALEF---------------PKEPAVP---------------------ATAKDLISQLLAK 191
+ EF PK P + + A+DL+S++L
Sbjct: 245 SAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 304
Query: 192 DPERRLGSTKGASAIKHHPFF 212
DP++R+ + HP+
Sbjct: 305 DPDKRISVDEAL----RHPYI 321
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKE-- 174
EY APE+ + + D W+LG ++ L G+ PF ++ + NI+ F +E
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF 227
Query: 175 PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
+ A D + +LL K+ + R+ AS HP+ +
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRM----TASEALQHPWLK 262
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D + G+ Y APE++ G+ + GS D W++GI L+ L G PF D+ + L
Sbjct: 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD-DNVMALYKK 221
Query: 165 VARA-LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF-FQGVNWALLRC 222
+ R + PK + ++ L+ Q+L DP++R+ + +HP+ Q N+ +
Sbjct: 222 IMRGKYDVPK--WLSPSSILLLQQMLQVDPKKRI----SMKNLLNHPWIMQDYNYPVEWQ 275
Query: 223 TTPPFV 228
+ PF+
Sbjct: 276 SKNPFI 281
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALE 170
+GT Y+APE++ G + D W+ G+ L+ L G PF G + L + E
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGS 199
P+ V +AKDLI + L P R+ +
Sbjct: 248 LPQWKKVSESAKDLIRKXLTYVPSXRISA 276
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 3/30 (10%)
Query: 4 IVYRDLKPENVLVRS---DGHIMLTDFDLS 30
IV+RDLKPEN+L+ S D +I + DF LS
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLS 176
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
+ P + VGT ++APE+V+ + +G VD W+LGI E+ G P+ + L
Sbjct: 167 ITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 226
Query: 162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
I E + A +D +++ L D E+R GS K + H F +
Sbjct: 227 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR-GSAK---ELIQHQFLK 275
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDF 27
+++RD+K +N+L+ DG + LTDF
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDF 161
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
+ P + VGT ++APE+V+ + +G VD W+LGI E+ G P+ + L
Sbjct: 166 ITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
I E + A +D +++ L D E+R GS K + H F +
Sbjct: 226 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR-GSAK---ELLQHQFLK 274
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDF 27
+++RD+K +N+L+ DG + LTDF
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDF 160
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
+ P + VGT ++APE+V+ + +G VD W+LGI E+ G P+ + L
Sbjct: 166 ITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
I E + A +D +++ L D E+R GS K + H F +
Sbjct: 226 YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR-GSAK---ELLQHQFLK 274
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDF 27
+++RD+K +N+L+ DG + LTDF
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDF 160
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 88/242 (36%), Gaps = 94/242 (38%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
+++RDLKP N+L+ S+ + + DF L+ D+SA+ D + P
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA------DNSEP------------- 172
Query: 63 PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
TGQ SG + FV T Y APE
Sbjct: 173 -----------------------------TGQQSG-----------MVEFVATRWYRAPE 192
Query: 123 I-VSGEGHGSPVDWWTLGIFLFELFYG--VTPFRGVDHELTLA-NIVA------------ 166
+ ++ + +D W+ G L ELF + P R H+L L I+
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIE 252
Query: 167 --RALEF----PKEPAVPATAK---------DLISQLLAKDPERRLGSTKGASAIKHHPF 211
RA E+ P PA P DL+ ++L DP +R+ + + HP+
Sbjct: 253 SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE----HPY 308
Query: 212 FQ 213
Q
Sbjct: 309 LQ 310
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 111 SFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFR-GVDHELTLANIVARA 168
S +GT Y+A E++ G GH +D ++LGI FE+ Y PF G++ L + + +
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVS 245
Query: 169 LEFP--KEPAVPATAKDLISQLLAKDPERRLGS 199
+EFP + K +I L+ DP +R G+
Sbjct: 246 IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGA 278
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 111 SFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFR-GVDHELTLANIVARA 168
S +GT Y+A E++ G GH +D ++LGI FE+ Y PF G++ L + + +
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVS 245
Query: 169 LEFP--KEPAVPATAKDLISQLLAKDPERRLGS 199
+EFP + K +I L+ DP +R G+
Sbjct: 246 IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGA 278
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 111 SFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLANIV 165
S VGT Y+APE++ E G D W+ G+ L+ + G PF D+ T+ I+
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235
Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
+ P + + LIS++ DP R+ + IK H +F
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPATRISIPE----IKTHSWF 278
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE ++ S D W G+ ++E L +GV PF+GV + + I P P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 235
Query: 176 AVPATAKDLISQLLAKDPERR 196
P T L+++ A DP RR
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRR 256
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPF 64
V+RD+ NVLV S+ + L DF LS +DS S PI + E ++ F
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA--SKGKLPIKWMAPES-INFRRF 189
Query: 65 TSAS 68
TSAS
Sbjct: 190 TSAS 193
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE ++ S D W G+ ++E L +GV PF+GV + + I P P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 235
Query: 176 AVPATAKDLISQLLAKDPERR 196
P T L+++ A DP RR
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRR 256
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPF 64
V+RD+ NVLV S+ + L DF LS +DS S PI + E ++ F
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKA--SKGKLPIKWMAPES-INFRRF 189
Query: 65 TSAS 68
TSAS
Sbjct: 190 TSAS 193
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE ++ S D W G+ ++E L +GV PF+GV + + I P P
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 240
Query: 176 AVPATAKDLISQLLAKDPERR 196
P T L+++ A DP RR
Sbjct: 241 NCPPTLYSLMTKCWAYDPSRR 261
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPF 64
V+RD+ NVLV S+ + L DF LS +DS S PI + E ++ F
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA--SKGKLPIKWMAPES-INFRRF 194
Query: 65 TSAS 68
TSAS
Sbjct: 195 TSAS 198
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE ++ S D W G+ ++E L +GV PF+GV + + I P P
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 263
Query: 176 AVPATAKDLISQLLAKDPERR 196
P T L+++ A DP RR
Sbjct: 264 NCPPTLYSLMTKCWAYDPSRR 284
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPF 64
V+RD+ NVLV S+ + L DF LS +DS S PI + E ++ F
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA--SKGKLPIKWMAPES-INFRRF 217
Query: 65 TSAS 68
TSAS
Sbjct: 218 TSAS 221
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE ++ S D W G+ ++E L +GV PF+GV + + I P P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 235
Query: 176 AVPATAKDLISQLLAKDPERR 196
P T L+++ A DP RR
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRR 256
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPF 64
V+RD+ NVLV S+ + L DF LS +DS S PI + E ++ F
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA--SKGKLPIKWMAPES-INFRRF 189
Query: 65 TSAS 68
TSAS
Sbjct: 190 TSAS 193
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE ++ S D W G+ ++E L +GV PF+GV + + I P P
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 237
Query: 176 AVPATAKDLISQLLAKDPERR 196
P T L+++ A DP RR
Sbjct: 238 NCPPTLYSLMTKCWAYDPSRR 258
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPF 64
V+RD+ NVLV S+ + L DF LS +DS S PI + E ++ F
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA--SKGKLPIKWMAPES-INFRRF 191
Query: 65 TSAS 68
TSAS
Sbjct: 192 TSAS 195
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE ++ S D W G+ ++E L +GV PF+GV + + I P P
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 238
Query: 176 AVPATAKDLISQLLAKDPERR 196
P T L+++ A DP RR
Sbjct: 239 NCPPTLYSLMTKCWAYDPSRR 259
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPF 64
V+RD+ NVLV S+ + L DF LS +DS S PI + E ++ F
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA--SKGKLPIKWMAPES-INFRRF 192
Query: 65 TSAS 68
TSAS
Sbjct: 193 TSAS 196
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE ++ S D W G+ ++E L +GV PF+GV + + I P P
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 232
Query: 176 AVPATAKDLISQLLAKDPERR 196
P T L+++ A DP RR
Sbjct: 233 NCPPTLYSLMTKCWAYDPSRR 253
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPF 64
V+RD+ NVLV S+ + L DF LS +DS S PI + E ++ F
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA--SKGKLPIKWMAPES-INFRRF 186
Query: 65 TSAS 68
TSAS
Sbjct: 187 TSAS 190
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE ++ S D W G+ ++E L +GV PF+GV + + I P P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 235
Query: 176 AVPATAKDLISQLLAKDPERR 196
P T L+++ A DP RR
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRR 256
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPF 64
V+RD+ NVLV + + L DF LS +DS S PI + E ++ F
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKA--SKGKLPIKWMAPES-INFRRF 189
Query: 65 TSAS 68
TSAS
Sbjct: 190 TSAS 193
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
VGT Y++P+++ G +G D W+ G+ ++ L G PF + I FP
Sbjct: 169 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 227
Query: 173 KEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
++ V A+ LI +LL K P++R+ S + A++H F
Sbjct: 228 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQ---ALEHEWF 265
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 87/242 (35%), Gaps = 94/242 (38%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
+++RDLKP N+L+ S+ + + DF L+ D+SA +D + P
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA------ADNSEP------------- 172
Query: 63 PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
TGQ SG +V T Y APE
Sbjct: 173 -----------------------------TGQQSG-----------MTEYVATRWYRAPE 192
Query: 123 I-VSGEGHGSPVDWWTLGIFLFELFYG--VTPFRGVDHELTLA-NIVA------------ 166
+ ++ + +D W+ G L ELF + P R H+L L I+
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIE 252
Query: 167 --RALEF----PKEPAVPATAK---------DLISQLLAKDPERRLGSTKGASAIKHHPF 211
RA E+ P PA P DL+ ++L DP +R+ + + HP+
Sbjct: 253 SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE----HPY 308
Query: 212 FQ 213
Q
Sbjct: 309 LQ 310
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
VGT Y++P+++ G +G D W+ G+ ++ L G PF + I FP
Sbjct: 186 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 244
Query: 173 KEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
++ V A+ LI +LL K P++R+ S + A++H F
Sbjct: 245 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQ---ALEHEWF 282
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLAN 163
R VGT ++APE++S +G VD W+LGI + E+ G P+ ++ N
Sbjct: 303 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 362
Query: 164 IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
+ R K V + K + +LL +DP +R A+ + HPF
Sbjct: 363 LPPRLKNLHK---VSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 404
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDF 27
G+++RD+K +++L+ DG + L+DF
Sbjct: 267 GVIHRDIKSDSILLTHDGRVKLSDF 291
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 18/136 (13%)
Query: 114 GTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
G+ Y APE++SG + P VD W+ G+ L+ L G PF DH TL + + +
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD-DHVPTLFKKICDGIFYT 235
Query: 173 KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFV---P 229
+ P+ L+ +L DP +R I+ H +F+ P ++
Sbjct: 236 PQYLNPSVIS-LLKHMLQVDPMKR----ATIKDIREHEWFKQ--------DLPKYLFPED 282
Query: 230 PPFNRELVSDESCPET 245
P ++ ++ DE+ E
Sbjct: 283 PSYSSTMIDDEALKEV 298
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
+V T Y APE++ G G+ VD W++G + EL G F+G DH + N V L
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH-IDQWNKVIEQLGT 241
Query: 172 P-----------------KEPAVP------------------------ATAKDLISQLLA 190
P PA P + A+DL+S++L
Sbjct: 242 PSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLV 301
Query: 191 KDPERRLGSTKGASAIKHHPFF 212
DP++R+ + HP+
Sbjct: 302 IDPDKRISVDEAL----RHPYI 319
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 144 GIIHRDLKPSNIVVKSDCTLKILDFGLA 171
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE ++ S D W G+ ++E L +GV PF+GV + + I P P
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 615
Query: 176 AVPATAKDLISQLLAKDPERR 196
P T L+++ A DP RR
Sbjct: 616 NCPPTLYSLMTKCWAYDPSRR 636
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPF 64
V+RD+ NVLV S+ + L DF LS +DS S PI + E ++ F
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA--SKGKLPIKWMAPES-INFRRF 569
Query: 65 TSAS 68
TSAS
Sbjct: 570 TSAS 573
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE ++ S D W G+ ++E L +GV PF+GV + + I P P
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 615
Query: 176 AVPATAKDLISQLLAKDPERR 196
P T L+++ A DP RR
Sbjct: 616 NCPPTLYSLMTKCWAYDPSRR 636
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPF 64
V+RD+ NVLV + + L DF LS +DS S PI + E ++ F
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKA--SKGKLPIKWMAPES-INFRRF 569
Query: 65 TSAS 68
TSAS
Sbjct: 570 TSAS 573
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLAN 163
R VGT ++APE++S +G VD W+LGI + E+ G P+ ++ N
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 240
Query: 164 IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
+ R K V + K + +LL +DP +R A+ + HPF
Sbjct: 241 LPPRLKNLHK---VSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 282
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDF 27
G+++RD+K +++L+ DG + L+DF
Sbjct: 145 GVIHRDIKSDSILLTHDGRVKLSDF 169
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLAN 163
R VGT ++APE++S +G VD W+LGI + E+ G P+ ++ N
Sbjct: 226 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 285
Query: 164 IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
+ R K V + K + +LL +DP +R A+ + HPF
Sbjct: 286 LPPRLKNLHK---VSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 327
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDF 27
G+++RD+K +++L+ DG + L+DF
Sbjct: 190 GVIHRDIKSDSILLTHDGRVKLSDF 214
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
FVGT +YLAPE++ + + VD+W+ G FE G PF
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
FVGT +YLAPE++ + + VD+W+ G FE G PF
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLAN 163
R VGT ++APE++S +G VD W+LGI + E+ G P+ ++ N
Sbjct: 183 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 242
Query: 164 IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
+ R K V + K + +LL +DP +R A+ + HPF
Sbjct: 243 LPPRLKNLHK---VSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 284
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDF 27
G+++RD+K +++L+ DG + L+DF
Sbjct: 147 GVIHRDIKSDSILLTHDGRVKLSDF 171
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
Y+APE++ E + D W+LG+ ++ L G PF +H L ++ I EF
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 241
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
P+ V K LI LL +P +R+ T+ +HP+ +++ T P P
Sbjct: 242 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 290
Query: 231 PFNRELVSDE 240
+R L D+
Sbjct: 291 HTSRVLKEDK 300
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLAN 163
R VGT ++APE++S +G VD W+LGI + E+ G P+ ++ N
Sbjct: 172 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 231
Query: 164 IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
+ R K V + K + +LL +DP +R A+ + HPF
Sbjct: 232 LPPRLKNLHK---VSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 273
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDF 27
G+++RD+K +++L+ DG + L+DF
Sbjct: 136 GVIHRDIKSDSILLTHDGRVKLSDF 160
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
Y+APE++ E + D W+LG+ ++ L G PF +H L ++ I EF
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 287
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
P+ V K LI LL +P +R+ T+ +HP+ +++ T P P
Sbjct: 288 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 336
Query: 231 PFNRELVSDE 240
+R L D+
Sbjct: 337 HTSRVLKEDK 346
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
Y+APE++ E + D W+LG+ ++ L G PF +H L ++ I EF
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 241
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
P+ V K LI LL +P +R+ T+ +HP+ +++ T P P
Sbjct: 242 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 290
Query: 231 PFNRELVSDE 240
+R L D+
Sbjct: 291 HTSRVLKEDK 300
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
Y+APE++ E + D W+LG+ ++ L G PF +H L ++ I EF
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 293
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
P+ V K LI LL +P +R+ T+ +HP+ +++ T P P
Sbjct: 294 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 342
Query: 231 PFNRELVSDE 240
+R L D+
Sbjct: 343 HTSRVLKEDK 352
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
Y+APE++ E + D W+LG+ ++ L G PF +H L ++ I EF
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 243
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
P+ V K LI LL +P +R+ T+ +HP+ +++ T P P
Sbjct: 244 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 292
Query: 231 PFNRELVSDE 240
+R L D+
Sbjct: 293 HTSRVLKEDK 302
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
Y+APE++ E + D W+LG+ ++ L G PF +H L ++ I EF
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 242
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
P+ V K LI LL +P +R+ T+ +HP+ +++ T P P
Sbjct: 243 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 291
Query: 231 PFNRELVSDE 240
+R L D+
Sbjct: 292 HTSRVLKEDK 301
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
Y+APE++ E + D W+LG+ ++ L G PF +H L ++ I EF
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 243
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
P+ V K LI LL +P +R+ T+ +HP+ +++ T P P
Sbjct: 244 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 292
Query: 231 PFNRELVSDE 240
+R L D+
Sbjct: 293 HTSRVLKEDK 302
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
Y+APE++ E + D W+LG+ ++ L G PF +H L ++ I EF
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 248
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
P+ V K LI LL +P +R+ T+ +HP+ +++ T P P
Sbjct: 249 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 297
Query: 231 PFNRELVSDE 240
+R L D+
Sbjct: 298 HTSRVLKEDK 307
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 111 SFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFR-GVDHELTLANIVARA 168
S +GT Y+A E++ G GH +D ++LGI FE Y PF G + L + + +
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLRSVS 245
Query: 169 LEFP--KEPAVPATAKDLISQLLAKDPERRLGS 199
+EFP + K +I L+ DP +R G+
Sbjct: 246 IEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGA 278
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPP 49
GI++R+LKP N+ + ++ + DF L+ S ++ S QN P
Sbjct: 136 GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS-QNLP 181
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
Y+APE++ E + D W+LG+ ++ L G PF +H L ++ I EF
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 257
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
P+ V K LI LL +P +R+ T+ +HP+ +++ T P P
Sbjct: 258 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 306
Query: 231 PFNRELVSDE 240
+R L D+
Sbjct: 307 HTSRVLKEDK 316
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
Y+APE++ E + D W+LG+ ++ L G PF +H L ++ I EF
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 247
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
P+ V K LI LL +P +R+ T+ +HP+ +++ T P P
Sbjct: 248 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 296
Query: 231 PFNRELVSDE 240
+R L D+
Sbjct: 297 HTSRVLKEDK 306
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLAN 163
R VGT ++APE++S +G VD W+LGI + E+ G P+ ++ N
Sbjct: 176 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 235
Query: 164 IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
+ R K V + K + +LL +DP +R A+ + HPF
Sbjct: 236 LPPRLKNLHK---VSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 277
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDF 27
G+++RD+K +++L+ DG + L+DF
Sbjct: 140 GVIHRDIKSDSILLTHDGRVKLSDF 164
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 33/137 (24%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG---VDHELTLANIVAR 167
S V T Y APE++ + +PVD W++G E+F FRG VD + +++
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 168 ALE--FPKEPAVPATA--------------------KDLISQLLAKDPERRLGSTKGASA 205
E +P++ A+P A KDL+ + L +P +R+ + S
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS- 296
Query: 206 IKHHPFFQGVNWALLRC 222
HP+FQ + RC
Sbjct: 297 ---HPYFQDLE----RC 306
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDLKP+N+LV S G I L DF L+
Sbjct: 141 VVHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
Y+APE++ E + D W+LG+ ++ L G PF +H L ++ I EF
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 249
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
P+ V K LI LL +P +R+ T+ +HP+ +++ T P P
Sbjct: 250 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 298
Query: 231 PFNRELVSDE 240
+R L D+
Sbjct: 299 HTSRVLKEDK 308
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G+ + E+ G F G
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGT 228
Query: 156 DH 157
DH
Sbjct: 229 DH 230
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G+ + E+ G F G
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGT 228
Query: 156 DH 157
DH
Sbjct: 229 DH 230
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 56/195 (28%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQN-EYLVDH 61
G+++RD+KP N+L+ ++ H+ + DF LS S N + +++ N P+++ +N E D
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLS----RSFVNIRRVTN-NIPLSINENTENFDDD 183
Query: 62 PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
P + +V T Y AP
Sbjct: 184 QPILT--------------------------------------------DYVATRWYRAP 199
Query: 122 EIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPAT 180
EI+ G + +D W+LG L E+ G F G L I+ ++FP V +
Sbjct: 200 EILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG-VIDFPSNEDVESI 258
Query: 181 ----AKDLISQLLAK 191
AK +I L K
Sbjct: 259 QSPFAKTMIESLKEK 273
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 33/137 (24%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG---VDHELTLANIVAR 167
S V T Y APE++ + +PVD W++G E+F FRG VD + +++
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 168 ALE--FPKEPAVPATA--------------------KDLISQLLAKDPERRLGSTKGASA 205
E +P++ A+P A KDL+ + L +P +R+ + S
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS- 296
Query: 206 IKHHPFFQGVNWALLRC 222
HP+FQ + RC
Sbjct: 297 ---HPYFQDLE----RC 306
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDLKP+N+LV S G I L DF L+
Sbjct: 141 VVHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 72/190 (37%), Gaps = 68/190 (35%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
G+++RDLKP N+ D + + DF L D +++
Sbjct: 138 GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP----------------- 180
Query: 63 PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
+PA + + TGQ VGT Y++PE
Sbjct: 181 -------------MPAYA---------RHTGQ------------------VGTKLYMSPE 200
Query: 123 IVSGEGHGSPVDWWTLGIFLFELFYGVTPFR-GVDHELTLANIVARALEFP-----KEPA 176
+ G + VD ++LG+ LFEL Y PF ++ TL ++ R L+FP K P
Sbjct: 201 QIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDV--RNLKFPPLFTQKYPC 255
Query: 177 VPATAKDLIS 186
+D++S
Sbjct: 256 EYVMVQDMLS 265
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 61 HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSF-------- 112
H + + + P I+ S + +KK + S V VD S +F
Sbjct: 154 HDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTI 213
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
V T Y APE++ G P D W++G +FE + G T F+ D+ LA
Sbjct: 214 VSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLA 263
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 29/128 (22%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG---VDHELTLANIVAR 167
S V T Y APE++ + +PVD W++G E+F FRG VD + +++
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 168 ALE--FPKEPAVPATA--------------------KDLISQLLAKDPERRLGSTKGASA 205
E +P++ A+P A KDL+ + L +P +R+ + S
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS- 296
Query: 206 IKHHPFFQ 213
HP+FQ
Sbjct: 297 ---HPYFQ 301
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDLKP+N+LV S G I L DF L+
Sbjct: 141 VVHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 111 SFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
S VGT Y+APE++ E G D W+ G+ L+ + G PF + + R L
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 170 E----FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
P + + LIS++ DP +R+ + I++H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPE----IRNHEWF 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 111 SFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
S VGT Y+APE++ E G D W+ G+ L+ + G PF + + R L
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 170 E----FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
P + + LIS++ DP +R+ + I++H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPE----IRNHEWF 277
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 111 SFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
S VGT Y+APE++ E G D W+ G+ L+ + G PF + + R L
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 233
Query: 170 E----FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
P + + LIS++ DP +R+ + I++H +F
Sbjct: 234 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPE----IRNHEWF 276
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 111 SFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
+F GT +Y+APEI+ G+G D W+LG + E+ G PF + V
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF 241
Query: 169 LEFPKEP-AVPATAKDLISQLLAKDPERR 196
P+ P ++ A AK I + DP++R
Sbjct: 242 KVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
++ + +GT +YL+PE G+ + D ++LG L+E+ G PF G D +++A R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVR 233
Query: 168 ALEFP---KEPAVPATAKDLISQLLAKDPERR 196
P + + A ++ + LAK+PE R
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
Score = 33.9 bits (76), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
GI++RD+KP N+L+ + + + DF ++ DS ++
Sbjct: 136 GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNS 172
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
++ + +GT +YL+PE G+ + D ++LG L+E+ G PF G D +++A R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVR 233
Query: 168 ALEFP---KEPAVPATAKDLISQLLAKDPERR 196
P + + A ++ + LAK+PE R
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 86/242 (35%), Gaps = 94/242 (38%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
+++RDLKP N+L+ S+ + + DF L+ D+SA +D + P
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA------ADNSEP------------- 172
Query: 63 PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
TGQ SG V T Y APE
Sbjct: 173 -----------------------------TGQQSG-----------MTEXVATRWYRAPE 192
Query: 123 I-VSGEGHGSPVDWWTLGIFLFELFYG--VTPFRGVDHELTLA-NIVA------------ 166
+ ++ + +D W+ G L ELF + P R H+L L I+
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIE 252
Query: 167 --RALEF----PKEPAVPATAK---------DLISQLLAKDPERRLGSTKGASAIKHHPF 211
RA E+ P PA P DL+ ++L DP +R+ + + HP+
Sbjct: 253 SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE----HPY 308
Query: 212 FQ 213
Q
Sbjct: 309 LQ 310
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
++ + +GT +YL+PE G+ + D ++LG L+E+ G PF G D +++A R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVR 233
Query: 168 ALEFP---KEPAVPATAKDLISQLLAKDPERR 196
P + + A ++ + LAK+PE R
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P FV T Y APE++ G G+ VD W++G + E+ G F G
Sbjct: 178 AGTSFMMVP-------FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 230
Query: 156 DH 157
DH
Sbjct: 231 DH 232
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 148 GIIHRDLKPSNIVVKSDCTLKILDFGLA 175
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
++ + +GT +YL+PE G+ + D ++LG L+E+ G PF G D +++A R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVR 233
Query: 168 ALEFP---KEPAVPATAKDLISQLLAKDPERR 196
P + + A ++ + LAK+PE R
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
++ + +GT +YL+PE G+ + D ++LG L+E+ G PF G D +++A R
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVR 250
Query: 168 ALEFP---KEPAVPATAKDLISQLLAKDPERR 196
P + + A ++ + LAK+PE R
Sbjct: 251 EDPIPPSARHEGLSADLDAVVLKALAKNPENR 282
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 111 SFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
+F GT +Y+APEI+ G+G D W+LG + E+ G PF + V
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF 227
Query: 169 LEFPKEP-AVPATAKDLISQLLAKDPERR 196
P+ P ++ A AK I + DP++R
Sbjct: 228 KVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
S VGT Y++PE + G+ D W+LG L+E+ +PF G L +
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254
Query: 171 FPKEPA--VPATAKDLISQLLAKDPERR 196
+P P+ + L++ + DPE+R
Sbjct: 255 YPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
+D + SFVGT Y++PE + G + D W++G+ L E+ G P + + +
Sbjct: 175 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFEL 234
Query: 165 VARALEFPKEPAVPATA-----KDLISQLLAKDPERR 196
+ + P P +P+ +D +++ L K+P R
Sbjct: 235 LDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPAER 270
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
I++RD+KP N+LV S G I L DF +S + DS +N+
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 181
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 111 SFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
S VGT Y+APE++ E G D W+ G+ L+ + G PF + + R L
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 170 E----FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
P + + LIS++ DP +R+ + I++H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPE----IRNHEWF 277
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 113 VGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE- 170
VGT Y+APE++ E G D W+ G+ L+ + G PF + + R L
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 171 ---FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
P + + LIS++ DP +R+ + I++H +F
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRISIPE----IRNHEWF 277
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ G F G
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 156 DH 157
DH
Sbjct: 229 DH 230
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 15/119 (12%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
VGT ++APE++S + + VD W+LGI + E+ G P+ + + R +
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY----FSDSPVQAMKRLRDS 256
Query: 172 P-----KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTP 225
P V +D + ++L +DP+ R A + HPF + L C P
Sbjct: 257 PPPKLKNSHKVSPVLRDFLERMLVRDPQER----ATAQELLDHPFL--LQTGLPECLVP 309
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDF 27
G+++RD+K +++L+ DG + L+DF
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDF 185
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ G F G
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 156 DH 157
DH
Sbjct: 229 DH 230
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ G F G
Sbjct: 177 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229
Query: 156 DH 157
DH
Sbjct: 230 DH 231
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ G F G
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 156 DH 157
DH
Sbjct: 229 DH 230
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFR---------GVDHELTLANIVARA 168
Y+APE++ E + D W+LG+ ++ L G PF G+ + L
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY---G 251
Query: 169 LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTP 225
P+ V AK LI LL DP RL T+ +HP+ +N +++ TP
Sbjct: 252 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQ----FMNHPW---INQSMVVPQTP 301
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 4 IVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSA 37
I +RD+KPEN+L S D + LTDF + + +A
Sbjct: 149 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA 185
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
S + T +Y APE++ G D W+ G L EL+ G FR +H LA + +
Sbjct: 218 SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQP 277
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAI 206
PK AT + S+ + KD E +L + AS+I
Sbjct: 278 IPKNMLYEATKTNG-SKYVNKD-ELKLAWPENASSI 311
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFR---------GVDHELTLANIVARA 168
Y+APE++ E + D W+LG+ ++ L G PF G+ + L
Sbjct: 176 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY---G 232
Query: 169 LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTP 225
P+ V AK LI LL DP RL T+ +HP+ +N +++ TP
Sbjct: 233 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQ----FMNHPW---INQSMVVPQTP 282
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 3 GIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSA 37
I +RD+KPEN+L S D + LTDF + + +A
Sbjct: 129 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA 166
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ G F G
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 156 DH 157
DH
Sbjct: 229 DH 230
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ G F G
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 156 DH 157
DH
Sbjct: 229 DH 230
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + + + Y APE++ G +G P+D W+LG L EL G G D LA ++
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI-E 313
Query: 168 ALEFPKEPAVPAT--AKDLIS 186
L P + + A+ AK+ +S
Sbjct: 314 LLGMPSQKLLDASKRAKNFVS 334
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
I++ DLKPEN+L++ G + D C
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + + + Y APE++ G +G P+D W+LG L EL G G D LA ++
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI-E 313
Query: 168 ALEFPKEPAVPAT--AKDLIS 186
L P + + A+ AK+ +S
Sbjct: 314 LLGMPSQKLLDASKRAKNFVS 334
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
I++ DLKPEN+L++ G + D C
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ G F G
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 156 DH 157
DH
Sbjct: 229 DH 230
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF- 171
+GT Y+APE++ + + D W+ G+ L+ L G PF G + L + F
Sbjct: 184 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 242
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
P V AK L+ +L +P +R+ + + +HP+
Sbjct: 243 PPDWTQVSDEAKQLVKLMLTYEPSKRISAEEAL----NHPW 279
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Query: 4 IVYRDLKPENVLVRS---DGHIMLTDFDLS 30
IV+RDLKPEN+L+ S D I + DF LS
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLS 171
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 78/213 (36%), Gaps = 81/213 (38%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPP 63
IV+RDLKPEN+L+ + ++ + DF LS I++D N
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLS----------NIMTDGN---------------- 162
Query: 64 FTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEI 123
F SC PN Y APE+
Sbjct: 163 FLKTSCGSPN--------------------------------------------YAAPEV 178
Query: 124 VSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHEL--TLANIVARALEFPKEPAVPAT 180
++G+ + P VD W+ GI L+ + G PF D E L V + + P
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPF---DDEFIPNLFKKVNSCVYVMPDFLSPG- 234
Query: 181 AKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
A+ LI +++ DP +R+ I+ P+F
Sbjct: 235 AQSLIRRMIVADPMQRI----TIQEIRRDPWFN 263
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
++ + +GT +YL+PE G+ + D ++LG L+E+ G PF G D ++A
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPDSVAYQHV 232
Query: 167 RALEFP---KEPAVPATAKDLISQLLAKDPERR 196
R P + + A ++ + LAK+PE R
Sbjct: 233 REDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
GI++RD+KP N+++ + + + DF ++ DS ++
Sbjct: 136 GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
+D + SFVGT Y+APE + G + D W++G+ L EL G P
Sbjct: 166 IDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
I++RD+KP N+LV S G I L DF +S + DS +N+
Sbjct: 136 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 172
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAV 177
Y APE++ G +G P+D W+LG L EL G G D LA ++ L P + +
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI-ELLGMPXQKLL 323
Query: 178 PAT--AKDLIS 186
A+ AK+ +S
Sbjct: 324 DASKRAKNFVS 334
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKC 33
I++ DLKPEN+L++ G + D C
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 34/138 (24%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D +V T Y APE++ H VD W++G + E+ G T F+G D+ L I
Sbjct: 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236
Query: 165 VAR----ALEFPKE----------PAVPAT---------------AKDLISQLLAKDPER 195
+ EF ++ ++P T A DL+ ++L D ++
Sbjct: 237 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK 296
Query: 196 RLGSTKGASAIKHHPFFQ 213
RL + + + HPFF+
Sbjct: 297 RLTAAQALT----HPFFE 310
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 6/118 (5%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
G+V+RDLKP N+ V D + + DF L+ D + + P +L +
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTV 205
Query: 63 PFTSASCIIPNCIVPAVSCFRPKRKRKK-----KTGQHSGPEFVVEPVDVRSMSFVGT 115
S CI+ ++ + F+ K + K G EFV + D + S++ +
Sbjct: 206 DIWSVGCIMAE-MLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS 262
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF- 171
+GT Y+APE++ + + D W+ G+ L+ L G PF G + L + F
Sbjct: 167 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 225
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
P V AK L+ +L +P +R+ + + +HP+
Sbjct: 226 PPDWTQVSDEAKQLVKLMLTYEPSKRISAEEAL----NHPW 262
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Query: 4 IVYRDLKPENVLVRS---DGHIMLTDFDLS 30
IV+RDLKPEN+L+ S D I + DF LS
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLS 154
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 34/138 (24%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D +V T Y APE++ H VD W++G + E+ G T F+G D+ L I
Sbjct: 195 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 254
Query: 165 VAR----ALEFPKE-------------------------PAVPATAKDLISQLLAKDPER 195
+ EF ++ P A DL+ ++L D ++
Sbjct: 255 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK 314
Query: 196 RLGSTKGASAIKHHPFFQ 213
RL + + + HPFF+
Sbjct: 315 RLTAAQALT----HPFFE 328
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 6/118 (5%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
G+V+RDLKP N+ V D + + DF L+ D + + P +L +
Sbjct: 164 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTV 223
Query: 63 PFTSASCIIPNCIVPAVSCFRPKRKRKK-----KTGQHSGPEFVVEPVDVRSMSFVGT 115
S CI+ ++ + F+ K + K G EFV + D + S++ +
Sbjct: 224 DIWSVGCIMAE-MLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS 280
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 111 SFVGTHEYLAPEIV----SGEGHGSPV-------DWWTLGIFLFELFYGVTPFRGVDHEL 159
S VGT Y+ PE + S +G D W+LG L+ + YG TPF+ + +++
Sbjct: 171 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 230
Query: 160 TLANIVA---RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
+ + + +EFP P +D++ L +DP++R+ + HP+ Q
Sbjct: 231 SKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRI----SIPELLAHPYVQ 281
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GIV+ DLKP N L+ DG + L DF ++
Sbjct: 131 GIVHSDLKPANFLI-VDGMLKLIDFGIA 157
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 111 SFVGTHEYLAPEIV----SGEGHGSPV-------DWWTLGIFLFELFYGVTPFRGVDHEL 159
S VGT Y+ PE + S +G D W+LG L+ + YG TPF+ + +++
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 160 TLANIV---ARALEFPKEPAVPATAKDLISQLLAKDPERRL 197
+ + + +EFP P +D++ L +DP++R+
Sbjct: 275 SKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRI 313
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GIV+ DLKP N L+ DG + L DF ++
Sbjct: 175 GIVHSDLKPANFLI-VDGMLKLIDFGIA 201
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 111 SFVGTHEYLAPEIV----SGEGHGSPV-------DWWTLGIFLFELFYGVTPFRGVDHEL 159
S VGT Y+ PE + S +G D W+LG L+ + YG TPF+ + +++
Sbjct: 167 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 226
Query: 160 TLANIVA---RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
+ + + +EFP P +D++ L +DP++R+ + HP+ Q
Sbjct: 227 SKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRI----SIPELLAHPYVQ 277
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GIV+ DLKP N L+ DG + L DF ++
Sbjct: 127 GIVHSDLKPANFLI-VDGMLKLIDFGIA 153
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
+F G+ Y APE+ G+ + P VD W+LG+ L+ L G PF G + + ++
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERR 196
P + ++L+ + L +P +R
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
IV+RDLK EN+L+ +D +I + DF S
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 111 SFVGTHEYLAPEIV----SGEGHGSPV-------DWWTLGIFLFELFYGVTPFRGVDHEL 159
S VGT Y+ PE + S +G D W+LG L+ + YG TPF+ + +++
Sbjct: 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 227
Query: 160 TLANIV---ARALEFPKEPAVPATAKDLISQLLAKDPERRL 197
+ + + +EFP P +D++ L +DP++R+
Sbjct: 228 SKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRI 266
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GIV+ DLKP N L+ DG + L DF ++
Sbjct: 128 GIVHSDLKPANFLI-VDGMLKLIDFGIA 154
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
+F G+ Y APE+ G+ + P VD W+LG+ L+ L G PF G + + ++
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERR 196
P + ++L+ + L +P +R
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
IV+RDLK EN+L+ +D +I + DF S
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
+F G+ Y APE+ G+ + P VD W+LG+ L+ L G PF G + + ++
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERR 196
P + ++L+ + L +P +R
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
IV+RDLK EN+L+ +D +I + DF S
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 111 SFVGTHEYLAPEIV----SGEGHGSPV-------DWWTLGIFLFELFYGVTPFRGVDHEL 159
S VGT Y+ PE + S +G D W+LG L+ + YG TPF+ + +++
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 160 TLANIVA---RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
+ + + +EFP P +D++ L +DP++R+ + HP+ Q
Sbjct: 247 SKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRI----SIPELLAHPYVQ 297
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GIV+ DLKP N L+ DG + L DF ++
Sbjct: 147 GIVHSDLKPANFLI-VDGMLKLIDFGIA 173
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 111 SFVGTHEYLAPEIV----SGEGHGSPV-------DWWTLGIFLFELFYGVTPFRGVDHEL 159
S VGT Y+ PE + S +G D W+LG L+ + YG TPF+ + +++
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 160 TLANIV---ARALEFPKEPAVPATAKDLISQLLAKDPERRL 197
+ + + +EFP P +D++ L +DP++R+
Sbjct: 275 SKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRI 313
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GIV+ DLKP N L+ DG + L DF ++
Sbjct: 175 GIVHSDLKPANFLI-VDGMLKLIDFGIA 201
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 111 SFVGTHEYLAPEIV----SGEGHGSPV-------DWWTLGIFLFELFYGVTPFRGVDHEL 159
S VGT Y+ PE + S +G D W+LG L+ + YG TPF+ + +++
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 160 TLANIV---ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
+ + + +EFP P +D++ L +DP++R+ + HP+ Q
Sbjct: 247 SKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRI----SIPELLAHPYVQ 297
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GIV+ DLKP N L+ DG + L DF ++
Sbjct: 147 GIVHSDLKPANFLI-VDGMLKLIDFGIA 173
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH 157
V T Y APE++ G G+ VD W++G + E+ G F G DH
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 13/81 (16%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--RALE 170
VGT Y++PE + G + VD ++LG+ LFEL Y + ++ I+ R L+
Sbjct: 237 VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFST------QMERVRIITDVRNLK 290
Query: 171 FP-----KEPAVPATAKDLIS 186
FP K P +D++S
Sbjct: 291 FPLLFTQKYPQEHMMVQDMLS 311
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS 44
G+++RDLKP N+ D + + DF L D +++
Sbjct: 184 GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
Y+APE++ E + D W+LG+ + L G PF +H L ++ I EF
Sbjct: 229 YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYS-NHGLAISPGXKTRIRXGQYEFP 287
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
P+ V K LI LL +P +R T+ +HP+ + + T P P
Sbjct: 288 NPEWSEVSEEVKXLIRNLLKTEPTQRXTITE----FXNHPW-------IXQSTKVPQTPL 336
Query: 231 PFNRELVSDE 240
+R L D+
Sbjct: 337 HTSRVLKEDK 346
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
+D + SFVGT Y++PE + G + D W++G+ L E+ G P
Sbjct: 218 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
I++RD+KP N+LV S G I L DF +S + DS +N+
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 224
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
+F G+ Y APE+ G+ + P VD W+LG+ L+ L G PF G + + ++
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERR 196
P + ++L+ + L +P +R
Sbjct: 224 RIP--FYMSTDCENLLKKFLILNPSKR 248
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
IV+RDLK EN+L+ +D +I + DF S
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 78/229 (34%), Gaps = 85/229 (37%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPP 63
IV+RDLKPEN+L+ ++ + DF LS I++D N
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLS----------NIMTDGN---------------- 161
Query: 64 FTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEI 123
F SC PN Y APE+
Sbjct: 162 FLKTSCGSPN--------------------------------------------YAAPEV 177
Query: 124 VSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAK 182
+SG+ + P VD W+ G+ L+ + PF + NI PK + A
Sbjct: 178 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK--FLSPGAA 235
Query: 183 DLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPP 231
LI ++L +P R I H Q +W + P ++ PP
Sbjct: 236 GLIKRMLIVNPLNR---------ISIHEIMQD-DW--FKVDLPEYLLPP 272
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 78/229 (34%), Gaps = 85/229 (37%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPP 63
IV+RDLKPEN+L+ ++ + DF LS I++D N
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLS----------NIMTDGN---------------- 157
Query: 64 FTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEI 123
F SC PN Y APE+
Sbjct: 158 FLKTSCGSPN--------------------------------------------YAAPEV 173
Query: 124 VSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAK 182
+SG+ + P VD W+ G+ L+ + PF + NI PK + A
Sbjct: 174 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK--FLSPGAA 231
Query: 183 DLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPP 231
LI ++L +P R I H Q +W + P ++ PP
Sbjct: 232 GLIKRMLIVNPLNR---------ISIHEIMQD-DW--FKVDLPEYLLPP 268
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
+F GT EY APE++ G + P ++ W+LG+ L+ L + PF L V A+
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF------CELEETVEAAI 241
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERR 196
P V L+S LL PERR
Sbjct: 242 HPPY--LVSKELMSLVSGLLQPVPERR 266
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDF 27
I++RD+K EN+++ D I L DF
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDF 174
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 112 FVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
F G+ Y APE+ G+ + P VD W+LG+ L+ L G PF G + + ++
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 171 FPKEPAVPATAKDLISQLLAKDPERR 196
P + ++L+ + L +P +R
Sbjct: 232 IP--FYMSTDCENLLKKFLILNPSKR 255
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
IV+RDLK EN+L+ +D +I + DF S
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 68/195 (34%), Gaps = 73/195 (37%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPP 63
IV+RDLKPEN+L+ ++ + DF LS I++D N
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLS----------NIMTDGN---------------- 167
Query: 64 FTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEI 123
F SC PN Y APE+
Sbjct: 168 FLKTSCGSPN--------------------------------------------YAAPEV 183
Query: 124 VSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAK 182
+SG+ + P VD W+ G+ L+ + PF + NI PK + A
Sbjct: 184 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK--FLSPGAA 241
Query: 183 DLISQLLAKDPERRL 197
LI ++L +P R+
Sbjct: 242 GLIKRMLIVNPLNRI 256
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
+F G Y APE+ G+ + P VD W+LG+ L+ L G PF G + + ++
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERR 196
P + ++L+ + L +P +R
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
IV+RDLK EN+L+ +D +I + DF S
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
VGT ++APE++S +G+ VD W+LGI + E+ G P+
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 21/25 (84%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDF 27
G+++RD+K +++L+ SDG I L+DF
Sbjct: 161 GVIHRDIKSDSILLTSDGRIKLSDF 185
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
+D + SFVGT Y++PE + G + D W++G+ L E+ G P
Sbjct: 183 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
I++RD+KP N+LV S G I L DF +S + DS +N+
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 189
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRG 154
+F G+ Y APE+ G+ + P VD W+LG+ L+ L G PF G
Sbjct: 172 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
IV+RDLK EN+L+ D +I + DF S
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 68/195 (34%), Gaps = 73/195 (37%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPP 63
IV+RDLKPEN+L+ ++ + DF LS I++D N
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLS----------NIMTDGN---------------- 166
Query: 64 FTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEI 123
F SC PN Y APE+
Sbjct: 167 FLKTSCGSPN--------------------------------------------YAAPEV 182
Query: 124 VSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAK 182
+SG+ + P VD W+ G+ L+ + PF + NI PK + A
Sbjct: 183 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK--FLSPGAA 240
Query: 183 DLISQLLAKDPERRL 197
LI ++L +P R+
Sbjct: 241 GLIKRMLIVNPLNRI 255
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
+D + SFVGT Y++PE + G + D W++G+ L E+ G P
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
I++RD+KP N+LV S G I L DF +S + DS +N+
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 162
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 39/136 (28%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
THE Y APEI+ G + + + VD W+LG E+ F G D E+ + R
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRT 219
Query: 169 LEFPKE-------------PAVPATAKD---------------LISQLLAKDPERRLGST 200
L P E P+ P A+ L+SQ+L DP +R+ S
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SA 278
Query: 201 KGASAIKHHPFFQGVN 216
K A A HPFFQ V
Sbjct: 279 KAALA---HPFFQDVT 291
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 39/136 (28%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
THE Y APEI+ G + + + VD W+LG E+ F G D E+ + R
Sbjct: 165 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRT 223
Query: 169 LEFPKE-------------PAVPATAKD---------------LISQLLAKDPERRLGST 200
L P E P+ P A+ L+SQ+L DP +R+ S
Sbjct: 224 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SA 282
Query: 201 KGASAIKHHPFFQGVN 216
K A A HPFFQ V
Sbjct: 283 KAALA---HPFFQDVT 295
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 39/136 (28%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
THE Y APEI+ G + + + VD W+LG E+ F G D E+ + R
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRT 219
Query: 169 LEFPKE-------------PAVPATAKD---------------LISQLLAKDPERRLGST 200
L P E P+ P A+ L+SQ+L DP +R+ S
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SA 278
Query: 201 KGASAIKHHPFFQGVN 216
K A A HPFFQ V
Sbjct: 279 KAALA---HPFFQDVT 291
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 39/136 (28%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
THE Y APEI+ G + + + VD W+LG E+ F G D E+ + R
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRT 218
Query: 169 LEFPKE-------------PAVPATAKD---------------LISQLLAKDPERRLGST 200
L P E P+ P A+ L+SQ+L DP +R+ S
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SA 277
Query: 201 KGASAIKHHPFFQGVN 216
K A A HPFFQ V
Sbjct: 278 KAALA---HPFFQDVT 290
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 39/136 (28%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
THE Y APEI+ G + + + VD W+LG E+ F G D E+ + R
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRT 219
Query: 169 LEFPKE-------------PAVPATAKD---------------LISQLLAKDPERRLGST 200
L P E P+ P A+ L+SQ+L DP +R+ S
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SA 278
Query: 201 KGASAIKHHPFFQGVN 216
K A A HPFFQ V
Sbjct: 279 KAALA---HPFFQDVT 291
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 39/136 (28%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
THE Y APEI+ G + + + VD W+LG E+ F G D E+ + R
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRT 218
Query: 169 LEFPKE-------------PAVPATAKD---------------LISQLLAKDPERRLGST 200
L P E P+ P A+ L+SQ+L DP +R+ S
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SA 277
Query: 201 KGASAIKHHPFFQGVN 216
K A A HPFFQ V
Sbjct: 278 KAALA---HPFFQDVT 290
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 39/136 (28%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
THE Y APEI+ G + + + VD W+LG E+ F G D E+ + R
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRT 218
Query: 169 LEFPKE-------------PAVPATAKD---------------LISQLLAKDPERRLGST 200
L P E P+ P A+ L+SQ+L DP +R+ S
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SA 277
Query: 201 KGASAIKHHPFFQGVN 216
K A A HPFFQ V
Sbjct: 278 KAALA---HPFFQDVT 290
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRG 154
+F G+ Y APE+ G+ + P VD W+LG+ L+ L G PF G
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 213
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
IV+RDLK EN+L+ +D +I + DF S
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG 154
+GT +Y +PE GE D +++GI L+E+ G PF G
Sbjct: 173 LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 39/136 (28%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
THE Y APEI+ G + + + VD W+LG E+ F G D E+ + R
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRT 218
Query: 169 LEFPKE-------------PAVPATAKD---------------LISQLLAKDPERRLGST 200
L P E P+ P A+ L+SQ+L DP +R+ S
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SA 277
Query: 201 KGASAIKHHPFFQGVN 216
K A A HPFFQ V
Sbjct: 278 KAALA---HPFFQDVT 290
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
+D + SFVGT Y++PE + G + D W++G+ L E+ G P
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
I++RD+KP N+LV S G I L DF +S + DS +N+
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 162
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 39/136 (28%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
THE Y APEI+ G + + + VD W+LG E+ F G D E+ + R
Sbjct: 162 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRT 220
Query: 169 LEFPKE-------------PAVPATAKD---------------LISQLLAKDPERRLGST 200
L P E P+ P A+ L+SQ+L DP +R+ S
Sbjct: 221 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SA 279
Query: 201 KGASAIKHHPFFQGVN 216
K A A HPFFQ V
Sbjct: 280 KAALA---HPFFQDVT 292
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
+D + SFVGT Y++PE + G + D W++G+ L E+ G P
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
I++RD+KP N+LV S G I L DF +S + DS +N+
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 162
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 39/136 (28%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
THE Y APEI+ G + + + VD W+LG E+ F G D E+ + R
Sbjct: 161 THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRT 219
Query: 169 LEFPKE-------------PAVPATAKD---------------LISQLLAKDPERRLGST 200
L P E P+ P A+ L+SQ+L DP +R+ S
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SA 278
Query: 201 KGASAIKHHPFFQGVN 216
K A A HPFFQ V
Sbjct: 279 KAALA---HPFFQDVT 291
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
+D + SFVGT Y++PE + G + D W++G+ L E+ G P
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
I++RD+KP N+LV S G I L DF +S + DS +N+
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 162
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
+D + SFVGT Y++PE + G + D W++G+ L E+ G P
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
I++RD+KP N+LV S G I L DF +S + DS +N+
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 162
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 39/136 (28%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
THE Y APEI+ G + + + VD W+LG E+ F G D E+ + R
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRT 219
Query: 169 LEFPKE-------------PAVPATAKD---------------LISQLLAKDPERRLGST 200
L P E P+ P A+ L+SQ+L DP +R+ S
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SA 278
Query: 201 KGASAIKHHPFFQGVN 216
K A A HPFFQ V
Sbjct: 279 KAALA---HPFFQDVT 291
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 221
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 280
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 281 LA---HPFFQDVT 290
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 222
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 281
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 282 LA---HPFFQDVT 291
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 222
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 281
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 282 LA---HPFFQDVT 291
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 225
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 284
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 285 LA---HPFFQDVT 294
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 222
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 281
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 282 LA---HPFFQDVT 291
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 225
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 284
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 285 LA---HPFFQDVT 294
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 224
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 283
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 284 LA---HPFFQDVT 293
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 221
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 280
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 281 LA---HPFFQDVT 290
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 39/136 (28%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
THE Y APEI+ G + + + VD W+LG E+ F G D E+ + R
Sbjct: 168 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRT 226
Query: 169 LEFPKE-------------PAVPATAKD---------------LISQLLAKDPERRLGST 200
L P E P+ P A+ L+SQ+L DP +R+ S
Sbjct: 227 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SA 285
Query: 201 KGASAIKHHPFFQGVN 216
K A A HPFFQ V
Sbjct: 286 KAALA---HPFFQDVT 298
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 39/136 (28%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
THE Y APEI+ G + + + VD W+LG E+ F G D E+ + R
Sbjct: 168 THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRT 226
Query: 169 LEFPKE-------------PAVPATAKD---------------LISQLLAKDPERRLGST 200
L P E P+ P A+ L+SQ+L DP +R+ S
Sbjct: 227 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SA 285
Query: 201 KGASAIKHHPFFQGVN 216
K A A HPFFQ V
Sbjct: 286 KAALA---HPFFQDVT 298
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 225
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 284
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 285 LA---HPFFQDVT 294
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKPEN+L+ ++G I L DF L+
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLA 153
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 222
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 281
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 282 LA---HPFFQDVT 291
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKPEN+L+ ++G I L DF L+
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLA 150
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 224
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 283
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 284 LA---HPFFQDVT 293
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 55/144 (38%), Gaps = 33/144 (22%)
Query: 100 FVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH- 157
++ D +V T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 170 YLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 158 -ELTLA---------------------NIVARALEFPKEPAVPA------TAKDLISQLL 189
+L L N + + PK A DL+ ++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 190 AKDPERRLGSTKGASAIKHHPFFQ 213
D ++R+ + A A+ H F Q
Sbjct: 290 VLDSDKRITA---AQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMT 180
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 114 GTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
G+ Y APE++SG + P VD W+ G+ L+ L G PF +H TL + + +
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD-EHVPTLFKKIRGGVFYI 230
Query: 173 KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
E + A L+ +L DP +R I+ H +F+
Sbjct: 231 PEYLNRSVAT-LLMHMLQVDPLKR----ATIKDIREHEWFK 266
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 114 GTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
G+ Y APE++SG + P VD W+ G+ L+ L G PF +H TL + + +
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD-EHVPTLFKKIRGGVFYI 230
Query: 173 KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
E + A L+ +L DP +R I+ H +F+
Sbjct: 231 PEYLNRSVAT-LLMHMLQVDPLKR----ATIKDIREHEWFK 266
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 224
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 283
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 284 LA---HPFFQDVT 293
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 223
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 282
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 283 LA---HPFFQDVT 292
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKPEN+L+ ++G I L DF L+
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
+F G Y APE+ G+ + P VD W+LG+ L+ L G PF G + L + R L
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN----LKELRERVL 226
Query: 170 EFP-KEPAVPAT-AKDLISQLLAKDPERR 196
+ P +T ++L+ + L +P +R
Sbjct: 227 RGKYRIPFYXSTDCENLLKKFLILNPSKR 255
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
IV+RDLK EN+L+ +D +I + DF S
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 225
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 284
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 285 LA---HPFFQDVT 294
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 224
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 283
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 284 LA---HPFFQDVT 293
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKPEN+L+ ++G I L DF L+
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLA 152
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 112 FVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
FV T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA 180
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 112 FVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
FV T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA 180
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 223
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 282
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 283 LA---HPFFQDVT 292
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 225
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 284
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 285 LA---HPFFQDVT 294
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRG 154
+F G Y APE+ G+ + P VD W+LG+ L+ L G PF G
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
IV+RDLK EN+L+ +D +I + DF S
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 223
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 282
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 283 LA---HPFFQDVT 292
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 223
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 282
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 283 LA---HPFFQDVT 292
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKPEN+L+ ++G I L DF L+
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 296 RITA---AQALAHAYFAQ 310
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 225
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 284
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 285 LA---HPFFQDVT 294
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
D + V T Y APE++ G P D W++G L E + G T F
Sbjct: 188 DEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 112 FVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
FV T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 178 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA 176
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 226
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 227 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 285
Query: 204 SAIKHHPFFQGVN 216
A HPFFQ V
Sbjct: 286 LA---HPFFQDVT 295
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
D + +GT Y+APE++ + + D W+ G+ ++ L G PF G + + + +
Sbjct: 202 DYKLRDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE 260
Query: 166 ARA--LEFPKEPAVPATAKDLISQLLAKDPERR 196
+F + AK+LI +L D +R
Sbjct: 261 KGKYYFDFNDWKNISDEAKELIKLMLTYDYNKR 293
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 3 GIVYRDLKPENVLVRSDG---HIMLTDFDLS 30
IV+RD+KPEN+L+ + +I + DF LS
Sbjct: 166 NIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTL-- 161
D +V T Y APEI+ H VD W++G + EL G T F G DH L
Sbjct: 204 TDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQ 263
Query: 162 ---------ANIVARA---------LEFPKEP---------AVPATAKDLISQLLAKDPE 194
A++++R P+ P A DL+ ++L D +
Sbjct: 264 IMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTD 323
Query: 195 RRLGSTKGASAIKHHPFF 212
+R+ +++ + HP+F
Sbjct: 324 KRITASEALA----HPYF 337
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 175 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 209
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 114 GTHEYLAPEIVSGEG--HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
G+ + PEI +G G VD W+ G+ L+ + G+ PF G + NI +
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI 232
Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
P + P + DL+ +L +P +R + I+ H +F+
Sbjct: 233 PGDCGPPLS--DLLKGMLEYEPAKRFSIRQ----IRQHSWFR 268
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA--LE 170
+GT ++APE++ G+ D W+LGI E+ G P+ + H + ++
Sbjct: 186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI-HPMRAIFMIPTNPPPT 244
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
F K D + Q L K PE+R +T+ + HPF +
Sbjct: 245 FRKPELWSDNFTDFVKQCLVKSPEQRATATQ----LLQHPFVR 283
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
++RD+K N+L+ ++GH L DF ++ + D +
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK 181
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 16/101 (15%)
Query: 111 SFVGTHEYLAPEIV----SGEGHGSPV-------DWWTLGIFLFELFYGVTPFRGVDHEL 159
S VG Y+ PE + S +G D W+LG L+ + YG TPF+ + +++
Sbjct: 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 160 TLANIV---ARALEFPKEPAVPATAKDLISQLLAKDPERRL 197
+ + + +EFP P +D++ L +DP++R+
Sbjct: 275 SKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRI 313
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 47/143 (32%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 214 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 156 DH----------------------ELTLANIVAR-----ALEFPK---EPAVPA------ 179
D+ + T+ N V L FPK + PA
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 326
Query: 180 ----TAKDLISQLLAKDPERRLG 198
A+DL+S++L DP +R+
Sbjct: 327 LKASQARDLLSKMLVIDPAKRIS 349
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLA 211
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 47/143 (32%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 214 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 156 DH----------------------ELTLANIVAR-----ALEFPK---EPAVPA------ 179
D+ + T+ N V L FPK + PA
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 326
Query: 180 ----TAKDLISQLLAKDPERRLG 198
A+DL+S++L DP +R+
Sbjct: 327 LKASQARDLLSKMLVIDPAKRIS 349
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLA 211
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 25/118 (21%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE--------LTL 161
+FVGT ++APE++ G+ D W+ GI EL G P+ H+ LTL
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY----HKYPPMKVLMLTL 240
Query: 162 AN------IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
N + E K+ + + +IS L KDPE+R A+ + H FFQ
Sbjct: 241 QNDPPSLETGVQDKEMLKKYG--KSFRKMISLCLQKDPEKR----PTAAELLRHKFFQ 292
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
G ++RD+K N+L+ DG + + DF +S
Sbjct: 141 GQIHRDVKAGNILLGEDGSVQIADFGVS 168
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGV-TPFRGVDHELTLANIVARALEFP 172
GT Y++PE +S + +G VD + LG+ L EL + T F L + + +
Sbjct: 197 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDK 256
Query: 173 KEPAVPATAKDLISQLLAKDPERR 196
KE K L+ +LL+K PE R
Sbjct: 257 KE-------KTLLQKLLSKKPEDR 273
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDL--SLKCDDSASNAQ 41
+++RDLKP N+ + + + DF L SLK D + ++
Sbjct: 157 LIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSK 196
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 296 RITA---AQALAHAYFAQ 310
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 296 RITA---AQALAHAYFAQ 310
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + D+ L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMT 180
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 33/132 (25%)
Query: 112 FVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA------ 162
+V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 163 ---------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPERRLGSTK 201
N + + PK A DL+ ++L D ++R+ +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA-- 299
Query: 202 GASAIKHHPFFQ 213
A A+ H F Q
Sbjct: 300 -AQALAHAYFAQ 310
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + D L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMT 180
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 296 RITA---AQALAHAYFAQ 310
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + D L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMT 180
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 47/143 (32%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 177 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 156 DH----------------------ELTLANIVAR-----ALEFPK---EPAVPA------ 179
D+ + T+ N V L FPK + PA
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 289
Query: 180 ----TAKDLISQLLAKDPERRLG 198
A+DL+S++L DP +R+
Sbjct: 290 LKASQARDLLSKMLVIDPAKRIS 312
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 25/118 (21%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE--------LTL 161
+FVGT ++APE++ G+ D W+ GI EL G P+ H+ LTL
Sbjct: 180 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY----HKYPPMKVLMLTL 235
Query: 162 AN------IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
N + E K+ + + +IS L KDPE+R A+ + H FFQ
Sbjct: 236 QNDPPSLETGVQDKEMLKKYG--KSFRKMISLCLQKDPEKR----PTAAELLRHKFFQ 287
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
G ++RD+K N+L+ DG + + DF +S
Sbjct: 136 GQIHRDVKAGNILLGEDGSVQIADFGVS 163
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 33/132 (25%)
Query: 112 FVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA------ 162
+V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Query: 163 ---------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPERRLGSTK 201
N + + PK A DL+ ++L D ++R+ +
Sbjct: 249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA-- 306
Query: 202 GASAIKHHPFFQ 213
A A+ H F Q
Sbjct: 307 -AQALAHAYFAQ 317
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ D +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT 187
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
Query: 163 ---------------------NIVARALEFPKEPAVPA------TAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 233 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 292
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 293 RITA---AQALAHAYFAQ 307
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 177
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 47/143 (32%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 175 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 227
Query: 156 DH----------------------ELTLANIVAR-----ALEFPK---EPAVPA------ 179
D+ + T+ N V L FPK + PA
Sbjct: 228 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 287
Query: 180 ----TAKDLISQLLAKDPERRLG 198
A+DL+S++L DP +R+
Sbjct: 288 LKASQARDLLSKMLVIDPAKRIS 310
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 145 GIIHRDLKPSNIVVKSDCTLKILDFGLA 172
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 112 FVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
+V T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ D +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT 187
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 47/143 (32%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 156 DH----------------------ELTLANIVAR-----ALEFPK---EPAVPA------ 179
D+ + T+ N V L FPK + PA
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 288
Query: 180 ----TAKDLISQLLAKDPERRLG 198
A+DL+S++L DP +R+
Sbjct: 289 LKASQARDLLSKMLVIDPAKRIS 311
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 248 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 307
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 308 RITA---AQALAHAYFAQ 322
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 192
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 163 ---------------------NIVARALEFPKEPAVPA------TAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 296 RITA---AQALAHAYFAQ 310
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 33/132 (25%)
Query: 112 FVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA------ 162
+V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 163 ---------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPERRLGSTK 201
N + + PK A DL+ ++L D ++R+ +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA-- 299
Query: 202 GASAIKHHPFFQ 213
A A+ H F Q
Sbjct: 300 -AQALAHAYFAQ 310
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 296 RITA---AQALAHAYFAQ 310
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 242 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 301
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 302 RITA---AQALAHAYFAQ 316
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 186
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 47/143 (32%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 156 DH----------------------ELTLANIVAR-----ALEFPK---EPAVPA------ 179
D+ + T+ N V L FPK + PA
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 288
Query: 180 ----TAKDLISQLLAKDPERRLG 198
A+DL+S++L DP +R+
Sbjct: 289 LKASQARDLLSKMLVIDPAKRIS 311
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 296 RITA---AQALAHAYFAQ 310
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
Query: 163 ---------------------NIVARALEFPKEPAVPA------TAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 233 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 292
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 293 RITA---AQALAHAYFAQ 307
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 177
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 183 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 243 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 302
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 303 RITA---AQALAHAYFAQ 317
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 187
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 238 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 297
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 298 RITA---AQALAHAYFAQ 312
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 182
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Query: 163 ---------------------NIVARALEFPKEPAVPA------TAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 232 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 291
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 292 RITA---AQALAHAYFAQ 306
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 176
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 47/143 (32%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 177 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 156 DH----------------------ELTLANIVAR-----ALEFPK---EPAVPA------ 179
D+ + T+ N V L FPK + PA
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 289
Query: 180 ----TAKDLISQLLAKDPERRLG 198
A+DL+S++L DP +R+
Sbjct: 290 LKASQARDLLSKMLVIDPAKRIS 312
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 241 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 300
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 301 RITA---AQALAHAYFAQ 315
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 185
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Query: 163 ---------------------NIVARALEFPKEPAVPA------TAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 241 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 300
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 301 RITA---AQALAHAYFAQ 315
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 185
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 296 RITA---AQALAHAYFAQ 310
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 247 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 306
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 307 RITA---AQALAHAYFAQ 321
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 157 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 191
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 174 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 233
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 234 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 293
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 294 RITA---AQALAHAYFAQ 308
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 144 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 178
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 175 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 234
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 235 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 294
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 295 RITA---AQALAHAYFAQ 309
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 145 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 179
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 296 RITA---AQALAHAYFAQ 310
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + D L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMT 180
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 248 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 307
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 308 RITA---AQALAHAYFAQ 322
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 192
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 248 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 307
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 308 RITA---AQALAHAYFAQ 322
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 192
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 238 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 297
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 298 RITA---AQALAHAYFAQ 312
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 182
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 296 RITA---AQALAHAYFAQ 310
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + F L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMT 180
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 112 FVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
+V T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ D +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT 187
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 47/143 (32%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 156 DH----------------------ELTLANIVAR-----ALEFPK---EPAVPA------ 179
D+ + T+ N V L FPK + PA
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 288
Query: 180 ----TAKDLISQLLAKDPERRLG 198
A+DL+S++L DP +R+
Sbjct: 289 LKASQARDLLSKMLVIDPAKRIS 311
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 47/143 (32%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 170 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
Query: 156 DH----------------------ELTLANIVAR-----ALEFPK---EPAVPA------ 179
D+ + T+ N V L FPK + PA
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 282
Query: 180 ----TAKDLISQLLAKDPERRLG 198
A+DL+S++L DP +R+
Sbjct: 283 LKASQARDLLSKMLVIDPAKRIS 305
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 47/143 (32%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 169 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
Query: 156 DH----------------------ELTLANIVAR-----ALEFPK---EPAVPA------ 179
D+ + T+ N V L FPK + PA
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 281
Query: 180 ----TAKDLISQLLAKDPERRLG 198
A+DL+S++L DP +R+
Sbjct: 282 LKASQARDLLSKMLVIDPAKRIS 304
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 139 GIIHRDLKPSNIVVKSDCTLKILDFGLA 166
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 199 DDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 259 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 318
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 319 RITA---AQALAHAYFAQ 333
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDD 35
I++RDLKP N+ V D + + DF L+ DD
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 200
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 196 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 256 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 315
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 316 RITA---AQALAHAYFAQ 330
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 200
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
IV+RDLKPEN+LV S G + L DF L+
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLA 159
Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF 146
V T Y APE++ + +PVD W++G E+F
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 296 RITA---AQALAHAYFAQ 310
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 47/143 (32%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 170 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
Query: 156 DH----------------------ELTLANIVAR-----ALEFPK---EPAVPA------ 179
D+ + T+ N V L FPK + PA
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 282
Query: 180 ----TAKDLISQLLAKDPERRLG 198
A+DL+S++L DP +R+
Sbjct: 283 LKASQARDLLSKMLVIDPAKRIS 305
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGV-TPFRGVDHELTLANIVARALEFP 172
GT Y++PE +S + +G VD + LG+ L EL + T F L + + +
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDK 242
Query: 173 KEPAVPATAKDLISQLLAKDPERR 196
KE K L+ +LL+K PE R
Sbjct: 243 KE-------KTLLQKLLSKKPEDR 259
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 238 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 297
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 298 RITA---AQALAHAYFAQ 312
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 148 IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT 182
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
D +V T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 186 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 238
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 156 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 190
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
D +V T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT 185
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 296 RITA---AQALAHAYFAQ 310
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L DD +
Sbjct: 146 IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMT 180
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
D +V T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 199 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 259 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 318
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 319 RITA---AQALAHAYFAQ 333
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 203
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 232 LRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 291
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 292 RITA---AQALAHAYFAQ 306
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 176
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
IV+RDLKPEN+LV S G + L DF L+
Sbjct: 141 IVHRDLKPENILVTSGGTVKLADFGLA 167
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF 146
V T Y APE++ + +PVD W++G E+F
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
D +V T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 238 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 297
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 298 RITA---AQALAHAYFAQ 312
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 182
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
D +V T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 176
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 55/130 (42%), Gaps = 34/130 (26%)
Query: 113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
V T Y APEI+ G + + + VD W+LG E+ F G D E+ + R L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 222
Query: 172 PKE-------------PAVPATAKD---------------LISQLLAKDPERRLGSTKGA 203
P E P+ P A+ L+SQ+L DP +R+ S K A
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAA 281
Query: 204 SAIKHHPFFQ 213
A HPFFQ
Sbjct: 282 LA---HPFFQ 288
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ ++G I L DF L+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 195 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 255 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 314
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 315 RITA---AQALAHAYFAQ 329
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 199
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
IV+RDLKPEN+LV S G + L DF L+
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLA 159
Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF 146
V T Y APE++ + +PVD W++G E+F
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 247 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 306
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 307 RITA---AQALAHAYFAQ 321
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 157 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT 191
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
D +V T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT 185
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
IV+RDLKPEN+LV S G + L DF L+
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLA 159
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF 146
V T Y APE++ + +PVD W++G E+F
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 33/138 (23%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA 162
D +V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
Query: 163 ---------------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPER 195
N + + PK A DL+ ++L D ++
Sbjct: 242 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 301
Query: 196 RLGSTKGASAIKHHPFFQ 213
R+ + A A+ H F Q
Sbjct: 302 RITA---AQALAHAYFAQ 316
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 152 IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT 186
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 72/189 (38%), Gaps = 54/189 (28%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 156 DH----------------------ELTLANIVAR-----ALEFPK---EPAVPA------ 179
D+ + T+ N V L FPK + PA
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 288
Query: 180 ----TAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRE 235
A+DL+S++L DP +R+ HP+ V + PP P ++++
Sbjct: 289 LKASQARDLLSKMLVIDPAKRISVDDAL----QHPYI-NVWYDPAEVEAPP--PQIYDKQ 341
Query: 236 LVSDESCPE 244
L E E
Sbjct: 342 LDEREHTIE 350
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 72/189 (38%), Gaps = 54/189 (28%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 169 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
Query: 156 DH----------------------ELTLANIVAR-----ALEFPK---EPAVPA------ 179
D+ + T+ N V L FPK + PA
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 281
Query: 180 ----TAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRE 235
A+DL+S++L DP +R+ HP+ V + PP P ++++
Sbjct: 282 LKASQARDLLSKMLVIDPAKRISVDDAL----QHPYI-NVWYDPAEVEAPP--PQIYDKQ 334
Query: 236 LVSDESCPE 244
L E E
Sbjct: 335 LDEREHTIE 343
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 139 GIIHRDLKPSNIVVKSDXTLKILDFGLA 166
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 47/143 (32%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 156 DH----------------------ELTLANIVAR-----ALEFPK---EPAVPA------ 179
D+ + T+ N V L FPK + PA
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 288
Query: 180 ----TAKDLISQLLAKDPERRLG 198
A+DL+S++L DP +R+
Sbjct: 289 LKASQARDLLSKMLVIDPAKRIS 311
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
D +V T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 186
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
D +V T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 186
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
D +V T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 195 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 199
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 112 FVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
+V T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT 180
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
D +V T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 196 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 200
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 19/124 (15%)
Query: 124 VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF--PKEPA 176
+GE + D W+LG+ ++ L G PF +H L ++ I EF P+
Sbjct: 170 TTGEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFPNPEWSE 228
Query: 177 VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNREL 236
V K LI LL +P +R+ T+ +HP+ +++ T P P +R L
Sbjct: 229 VSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPLHTSRVL 277
Query: 237 VSDE 240
D+
Sbjct: 278 KEDK 281
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 16/100 (16%)
Query: 2 LGIVYRDLKPENVLV---RSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYL 58
+ I +RD+KPEN+L R + + LTDF + ++ S + V+ L
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTGEKYDKSCDMWSLGVIMYILL 192
Query: 59 VDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGP 98
+PPF S + A+S P K + + GQ+ P
Sbjct: 193 CGYPPFYSNHGL-------AIS---PGMKTRIRMGQYEFP 222
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 72/189 (38%), Gaps = 54/189 (28%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 156 DH----------------------ELTLANIVAR-----ALEFPK---EPAVPA------ 179
D+ + T+ N V L FPK + PA
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 288
Query: 180 ----TAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRE 235
A+DL+S++L DP +R+ HP+ V + PP P ++++
Sbjct: 289 LKASQARDLLSKMLVIDPAKRISVDDAL----QHPYI-NVWYDPAEVEAPP--PQIYDKQ 341
Query: 236 LVSDESCPE 244
L E E
Sbjct: 342 LDEREHTIE 350
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
GI++RDLKP NV V D + + DF L+ + D+ + P +L +
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTV 210
Query: 63 PFTSASCIIPNCI 75
S CI+ +
Sbjct: 211 DIWSVGCIMAELL 223
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
GI++RDLKP NV V D + + DF L+ + D+ + P +L +
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTV 210
Query: 63 PFTSASCIIPNCI 75
S CI+ +
Sbjct: 211 DIWSVGCIMAELL 223
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 34/136 (25%)
Query: 113 VGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRG---VDH----ELTLANI 164
V T Y APE++ G+ +G VD W +G + E+F G F G +D + L N+
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNL 244
Query: 165 VARALEF----------------------PKEPAVPATAKDLISQLLAKDPERRLGSTKG 202
+ R E + P + DL + L DP++R
Sbjct: 245 IPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKR----PF 300
Query: 203 ASAIKHHPFFQGVNWA 218
+ + HH FFQ +A
Sbjct: 301 CAELLHHDFFQMDGFA 316
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
I++RD+KPEN+LV G + L DF +
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFA 171
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTP 151
++ +FVGT ++APE++ + S D W+LGI EL G P
Sbjct: 157 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
++RD+K NVL+ G + L DF ++ + D+
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 115 THEYLAPEIVSGEGH---GSPVDWWTLGIFLFELFYGVTPFRGVDHEL-TLANIVARALE 170
T Y APE+ S + H D W+LG L+ + +G P+ V + ++A V L
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS 265
Query: 171 FPKEPAVPATAKDLISQLLAKDPERR 196
P+ P + L++ ++ DP +R
Sbjct: 266 IPQSPRHSSALWQLLNSMMTVDPHQR 291
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFD-------------LSLKCDDSASNAQIISDQNPP 49
G +RDLKP N+L+ +G +L D +L D A+ IS + P
Sbjct: 154 GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE 213
Query: 50 IAVLQNEYLVD-HPPFTSASCII 71
+ +Q+ ++D S C++
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVL 236
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTP 151
++ +FVGT ++APE++ + S D W+LGI EL G P
Sbjct: 175 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
++RD+K NVL+ G + L DF ++ + D+
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 173
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
I++RD+KP N+LV S G I L DF +S + D +N
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN 164
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTP 151
+D + FVGT Y++PE + G + D W++G+ L E+ G P
Sbjct: 159 IDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTP 151
++ +FVGT ++APE++ + S D W+LGI EL G P
Sbjct: 179 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
++RD+K NVL+ G + L DF ++ + D+
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 177
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 30/74 (40%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
GI++RDLKP N+ V D + + DF L+ + D + P +L
Sbjct: 148 GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTV 207
Query: 63 PFTSASCIIPNCIV 76
S CI+ I
Sbjct: 208 DIWSVGCIMAEMIT 221
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 101 VVEPVDVRSMSFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL 159
+ D V T Y APE++ + + VD W++G + E+ G T F+G DH
Sbjct: 174 LARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD 233
Query: 160 TLANIV 165
L I+
Sbjct: 234 QLKEIM 239
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
I++RDLKP+N+L+ SDG + L DF L+
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 34/140 (24%)
Query: 107 VRSMSF-VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
VRS + V T Y AP+++ G + + + VD W++G E+ G F GV + L I
Sbjct: 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI 232
Query: 165 VA---------------------RALE-FPKEP---AVPATAK---DLISQLLAKDPERR 196
+ R + F K+P +P + DL+S +L DP +R
Sbjct: 233 FSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKR 292
Query: 197 LGSTKGASAIKHHPFFQGVN 216
+ + + HP+F+ ++
Sbjct: 293 ISARDAMN----HPYFKDLD 308
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
I++RDLKP+N+L+ SDG + L DF L+
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 34/140 (24%)
Query: 107 VRSMSF-VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
VRS + V T Y AP+++ G + + + VD W++G E+ G F GV + L I
Sbjct: 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI 232
Query: 165 VA---------------------RALE-FPKEP---AVPATAK---DLISQLLAKDPERR 196
+ R + F K+P +P + DL+S +L DP +R
Sbjct: 233 FSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKR 292
Query: 197 LGSTKGASAIKHHPFFQGVN 216
+ + + HP+F+ ++
Sbjct: 293 ISARDAMN----HPYFKDLD 308
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTP 151
++ FVGT ++APE++ + S D W+LGI EL G P
Sbjct: 174 IKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
++RD+K NVL+ G + L DF ++ + D+
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFR 153
+ V T Y PE++ G P D W++G LFE + G T F+
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 249
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFR 153
+ V T Y PE++ G P D W++G LFE + G T F+
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 240
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 51/131 (38%), Gaps = 33/131 (25%)
Query: 113 VGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELTLA------- 162
V T Y APEI+ H VD W++G + EL G T F G DH +L L
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 163 --------------NIVARALEFPKEP------AVPATAKDLISQLLAKDPERRLGSTKG 202
N + + PK A DL+ ++L D ++R+ +
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA--- 299
Query: 203 ASAIKHHPFFQ 213
A A+ H F Q
Sbjct: 300 AQALAHAYFAQ 310
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I++RDLKP N+ V D + + DF L+ DD +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFR 153
+ V T Y PE++ G P D W++G LFE + G T F+
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 272
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTP 151
++ FVGT ++APE++ + S D W+LGI EL G P
Sbjct: 157 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
++RD+K NVL+ G + L DF ++ + D+
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHE--------YLAPEIVSGEGHGSPV 133
+ PK KR ++T P+ ++ VD S ++ H Y APE++ G P
Sbjct: 160 YNPKIKRDERTL--INPD--IKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPC 215
Query: 134 DWWTLGIFLFELFYGVTPF 152
D W++G L E + G T F
Sbjct: 216 DVWSIGCILIEYYLGFTVF 234
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
GI++RDLKP NV V D + + DF L+ + D+ + P +L +
Sbjct: 143 GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTV 202
Query: 63 PFTSASCIIPNCI 75
S CI+ +
Sbjct: 203 DIWSVGCIMAELL 215
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ APE + D W G+ L+E+F YG P+ G++ L I P+
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
Query: 177 VPATAKDLISQLLAKDPERR 196
P +++ Q A PE R
Sbjct: 244 CPQDIYNVMVQCWAHKPEDR 263
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 113 VGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH 157
V T Y APEI+ H VD W++G + EL G T F G DH
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDD 35
I++RDLKP N+ V D + + DF L+ DD
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE + + D W+ GIFL+ELF G +P+ G+ + ++
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 176 AVPATAKDLISQLLAKDPERR 196
PA D++ DP +R
Sbjct: 295 HAPAEMYDIMKTCWDADPLKR 315
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE + + D W+ GIFL+ELF G +P+ G+ + ++
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 289
Query: 176 AVPATAKDLISQLLAKDPERR 196
PA D++ DP +R
Sbjct: 290 HAPAEMYDIMKTCWDADPLKR 310
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++EP V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 176 AGTSFMMEPE-------VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 228
Query: 156 DH 157
D+
Sbjct: 229 DY 230
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE + + D W+ GIFL+ELF G +P+ G+ + ++
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 176 AVPATAKDLISQLLAKDPERR 196
PA D++ DP +R
Sbjct: 295 HAPAEMYDIMKTCWDADPLKR 315
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 109 SMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
+++++ + Y APE++ G H + VD W++G E+ G FRG + L IV
Sbjct: 188 NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 2 LGIVYRDLKPENVLV-RSDGHIMLTDFDLSLKCDDSASNAQIISDQ--NPPIAVLQNEYL 58
+ + +RD+KP NVLV +DG + L DF + K S N I + P + N++
Sbjct: 150 VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHY 209
Query: 59 VDHPPFTSASCIIPNCIV 76
S CI ++
Sbjct: 210 TTAVDIWSVGCIFAEMML 227
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 193 PERR 196
PE R
Sbjct: 256 PEER 259
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 193 PERR 196
PE R
Sbjct: 256 PEER 259
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE + + D W+ GIFL+ELF G +P+ G+ + ++
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 271
Query: 176 AVPATAKDLISQLLAKDPERR 196
PA D++ DP +R
Sbjct: 272 HAPAEMYDIMKTCWDADPLKR 292
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE + + D W+ GIFL+ELF G +P+ G+ + ++
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 287
Query: 176 AVPATAKDLISQLLAKDPERR 196
PA D++ DP +R
Sbjct: 288 HAPAEMYDIMKTCWDADPLKR 308
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 54/144 (37%), Gaps = 35/144 (24%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
+ D +V Y APE+V +G VD W+ G + E+F FRG L
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 162 ANIV------------------ARALEFPKEPAVPA------------TAKDLISQLLAK 191
IV AR VPA A DLI+++L
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF 303
Query: 192 DPERRLGSTKGASAIKHHPFFQGV 215
+P+RR+ + + HP+F+ +
Sbjct: 304 NPQRRISTEQALR----HPYFESL 323
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQ--NPPIAVLQNEYLVD 60
G+V+RDL P N+L+ + I + DF+L+ + A+ ++ + P V+Q +
Sbjct: 154 GVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTK 213
Query: 61 HPPFTSASCII 71
SA C++
Sbjct: 214 LVDMWSAGCVM 224
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 193 PERR 196
PE R
Sbjct: 256 PEER 259
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
+GT YL+PEI + + + D W LG L+EL F + + I++ + P
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP-P 244
Query: 173 KEPAVPATAKDLISQLLAKDPERR 196
+ L+SQL ++P R
Sbjct: 245 VSLHYSYDLRSLVSQLFKRNPRDR 268
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
I++RD+K +N+ + DG + L DF ++
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIA 172
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 170 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 222
Query: 156 DH 157
D+
Sbjct: 223 DY 224
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++ P +V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 181 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 233
Query: 156 DH 157
D+
Sbjct: 234 DY 235
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 151 GIIHRDLKPSNIVVKSDCTLKILDFGLA 178
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ APE + D W G+ L+E+F YG P+ G++ L I P+
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 177 VPATAKDLISQLLAKDPERR 196
P +++ Q A PE R
Sbjct: 240 CPQDIYNVMVQCWAHKPEDR 259
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ APE + D W G+ L+E+F YG P+ G++ L I P+
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
Query: 177 VPATAKDLISQLLAKDPERR 196
P +++ Q A PE R
Sbjct: 244 CPQDIYNVMVQCWAHKPEDR 263
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ APE + D W G+ L+E+F YG P+ G++ L I P+
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
Query: 177 VPATAKDLISQLLAKDPERR 196
P +++ Q A PE R
Sbjct: 250 CPQDIYNVMVQCWAHKPEDR 269
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ APE + D W G+ L+E+F YG P+ G++ L I P+
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 177 VPATAKDLISQLLAKDPERR 196
P +++ Q A PE R
Sbjct: 240 CPQDIYNVMVQCWAHKPEDR 259
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 193 PERR 196
PE R
Sbjct: 256 PEER 259
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 106/300 (35%), Gaps = 109/300 (36%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDD-SASNAQIISDQNPPIAVLQNEYLVDH 61
GI++RDLKP N LV D + + DF L+ D N+Q+ PI+ +++ +
Sbjct: 176 GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQL------PISPREDDMNLVT 229
Query: 62 PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
P T K +++ TG V T Y AP
Sbjct: 230 FPHT-------------------KNLKRQLTGH------------------VVTRWYRAP 252
Query: 122 E-IVSGEGHGSPVDWWTLGIFLFE-----------------LFYGVTPF----------- 152
E I+ E + +D W++G E LF G + F
Sbjct: 253 ELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGND 312
Query: 153 -----RGVDHELTLA-NIVA-------RALE----------FPKE---------PAVPAT 180
RG +L + NI+ ALE FPK PA A
Sbjct: 313 FKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSAD 372
Query: 181 AKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDE 240
A L+ ++L +P +R+ + + HPFF+ V A + V PFN + DE
Sbjct: 373 AIHLLKRMLVFNPNKRITINECLA----HPFFKEVRIAEVETNATEKVRLPFNDWMNMDE 428
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ APE + D W G+ L+E+F YG P+ G++ L I P+
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
Query: 177 VPATAKDLISQLLAKDPERR 196
P +++ Q A PE R
Sbjct: 250 CPQDIYNVMVQCWAHKPEDR 269
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q KD
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 422
Query: 193 PERR 196
PE R
Sbjct: 423 PEER 426
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ APE + D W G+ L+E+F YG P+ G++ L I P+
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 177 VPATAKDLISQLLAKDPERR 196
P +++ Q A PE R
Sbjct: 240 CPQDIYNVMVQCWAHKPEDR 259
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q KD
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 244
Query: 193 PERR 196
PE R
Sbjct: 245 PEER 248
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 268
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 269 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 308
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 34/133 (25%)
Query: 113 VGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRG---VDH----ELTLANI 164
V T Y +PE++ G+ +G PVD W +G EL GV + G VD TL ++
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222
Query: 165 VAR------------ALEFP----------KEPAVPATAKDLISQLLAKDPERRLGSTKG 202
+ R ++ P K P + A L+ L DP RL
Sbjct: 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERL----T 278
Query: 203 ASAIKHHPFFQGV 215
+ HHP+F+ +
Sbjct: 279 CEQLLHHPYFENI 291
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLS 30
++RD+KPEN+L+ I L DF +
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFA 149
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 193 PERR 196
PE R
Sbjct: 256 PEER 259
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 54/144 (37%), Gaps = 35/144 (24%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
+ D +V Y APE+V +G VD W+ G + E+F FRG L
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 162 ANIV------------------ARALEFPKEPAVPA------------TAKDLISQLLAK 191
IV AR VPA A DLI+++L
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF 303
Query: 192 DPERRLGSTKGASAIKHHPFFQGV 215
+P+RR+ + + HP+F+ +
Sbjct: 304 NPQRRISTEQALR----HPYFESL 323
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQ--NPPIAVLQNEYLVD 60
G+V+RDL P N+L+ + I + DF+L+ + A+ ++ + P V+Q +
Sbjct: 154 GVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTK 213
Query: 61 HPPFTSASCII 71
SA C++
Sbjct: 214 LVDMWSAGCVM 224
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 193 PERR 196
PE R
Sbjct: 256 PEER 259
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 193 PERR 196
PE R
Sbjct: 256 PEER 259
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 193 PERR 196
PE R
Sbjct: 256 PEER 259
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 32/132 (24%)
Query: 109 SMSFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRG---VDHELTLANI 164
S++ + + Y APE++ G +P +D W++G EL G F G +D + + I
Sbjct: 198 SVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQI 257
Query: 165 VAR--------------ALEFPKEPA----------VPATAKDLISQLLAKDPERRLGST 200
+ + FP A P+ A DL+ Q+L +P+ R+
Sbjct: 258 MGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPY 317
Query: 201 KGASAIKHHPFF 212
+ + HPFF
Sbjct: 318 EAMA----HPFF 325
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q KD
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 246
Query: 193 PERR 196
PE R
Sbjct: 247 PEER 250
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 108 RSMSFVGTHEYLAPEIVSGEG-----HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
R SF+GT ++APE+V E + D W+LGI L E+ P HEL
Sbjct: 165 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH----HELNPM 220
Query: 163 NIVAR-ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
++ + A P A P+ L K E+ + + S + HPF
Sbjct: 221 RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 270
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
I++RDLK N+L DG I L DF +S K
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSAK 157
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS--LKCDDSASNA 40
+V+RDL NVLV+S H+ +TDF L+ L+ D+ NA
Sbjct: 161 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 199
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 96 SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
+G F++EP V T Y APE++ G G+ VD W++G + E+ F G
Sbjct: 176 AGTSFMMEPE-------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGR 228
Query: 156 DH 157
D+
Sbjct: 229 DY 230
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
GI++RDLKP N++V+SD + + DF L+
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLK-CDDSASN 39
G+++RD+KP N+L+ G I L DF +S + DD A +
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD 182
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 13/94 (13%)
Query: 113 VGTHEYLAPEIV-----SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
G Y+APE + + + D W+LGI L EL G P++ + ++ +
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF---EVLTK 241
Query: 168 ALE-----FPKEPAVPATAKDLISQLLAKDPERR 196
L+ P + + L KD +R
Sbjct: 242 VLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKR 275
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
L I++RD+KP N+L+ G+I L DF +S + DS + +
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTR 184
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 114 GTHEYLAPEIV----SGEGHGSPVDWWTLGIFLFELFYGVTPF 152
G Y+APE + S +G+ D W+LGI L+EL G P+
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 182 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 240
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 241 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 280
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 253
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 254 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 293
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 241
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 242 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 281
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 168 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 226
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 227 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 266
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 167 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 225
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 226 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 265
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 168 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 226
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 227 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 266
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 168 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 226
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 227 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 266
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS--LKCDDSASNA 40
+V+RDL NVLV+S H+ +TDF L+ L+ D+ NA
Sbjct: 138 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 176
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 202 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 260
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 261 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 300
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE + HG W+LGI L+++ G PF D E+ +
Sbjct: 167 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 225
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 226 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 265
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 166 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 224
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 225 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 264
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 268
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 269 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 308
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 163 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 221
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 222 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 261
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 10/110 (9%)
Query: 108 RSMSFVGTHEYLAPEIVSGE-GHGSPVDW----WTLGIFLFELFYGVTPFRGVDHELTLA 162
R SF+GT ++APE+V E P D+ W+LGI L E+ P HEL
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH----HELNPM 246
Query: 163 NIVAR-ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
++ + A P A P+ L K E+ + + S + HPF
Sbjct: 247 RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
I++RDLK N+L DG I L DF +S K
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAK 184
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 10/110 (9%)
Query: 108 RSMSFVGTHEYLAPEIVSGE-GHGSPVDW----WTLGIFLFELFYGVTPFRGVDHELTLA 162
R SF+GT ++APE+V E P D+ W+LGI L E+ P HEL
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH----HELNPM 246
Query: 163 NIVAR-ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
++ + A P A P+ L K E+ + + S + HPF
Sbjct: 247 RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
I++RDLK N+L DG I L DF +S K
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAK 184
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 15/157 (9%)
Query: 41 QIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEF 100
Q++ D + L+++ + H + +C++ V +S F R+ SG
Sbjct: 217 QMVGDAAAGMEYLESKCCI-HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLR 275
Query: 101 VVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHEL 159
V PV ++ APE ++ + S D W+ GI L+E F G +P+ + ++
Sbjct: 276 QV-PV-----------KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
Query: 160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERR 196
T V + P P L+ Q A +P +R
Sbjct: 324 T-REFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQR 359
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 182 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 240
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + LI LA P R I++HP+ Q V
Sbjct: 241 FFRQ-------RVSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 280
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 241
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + LI LA P R I++HP+ Q V
Sbjct: 242 FFRQ-------RVSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 281
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
+FVGT Y++PE ++ + D W+LG L+EL + PF
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
+++RDLKP NV + ++ L DF L+ + S A+
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 254
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 255 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 294
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q K+
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 504
Query: 193 PERR 196
PE R
Sbjct: 505 PEER 508
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 254
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 255 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 294
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 253
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 254 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 293
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 253
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 254 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 293
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 268
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + LI LA P R I++HP+ Q V
Sbjct: 269 FFRQ-------RVSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 308
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
+FVGT Y++PE ++ + D W+LG L+EL + PF
Sbjct: 175 AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
+++RDLKP NV + ++ L DF L+ + S A+
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 241
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + LI LA P R I++HP+ Q V
Sbjct: 242 FFRQ-------RVSXECQHLIRWCLALRPXDR----PTFEEIQNHPWMQDV 281
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 15/157 (9%)
Query: 41 QIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEF 100
Q++ D + L+++ + H + +C++ V +S F R+ SG
Sbjct: 217 QMVGDAAAGMEYLESKCCI-HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLR 275
Query: 101 VVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHEL 159
V PV ++ APE ++ + S D W+ GI L+E F G +P+ + ++
Sbjct: 276 QV-PV-----------KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
Query: 160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERR 196
T V + P P L+ Q A +P +R
Sbjct: 324 T-REFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQR 359
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 163 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 221
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + + LI LA P R I++HP+ Q V
Sbjct: 222 FFRQ-------RVSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 261
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 215 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 273
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + LI LA P R I++HP+ Q V
Sbjct: 274 FFRQ-------RVSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 313
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
I +RDL NVLV++DG +++DF LS++
Sbjct: 140 AISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
Score = 34.3 bits (77), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 21/139 (15%)
Query: 29 LSLKCDDSASNAQIISDQNPPIAVLQNEY--------LVDHPPFTSASCIIPNCIVPAVS 80
LSL D S+ ++ +A L E + H S + ++ N +S
Sbjct: 103 LSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162
Query: 81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-------EGHGSPV 133
F + G E D ++S VGT Y+APE++ G E V
Sbjct: 163 DFGLSMRLTGNRLVRPGEE------DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQV 216
Query: 134 DWWTLGIFLFELFYGVTPF 152
D + LG+ +E+F T
Sbjct: 217 DMYALGLIYWEIFMRCTDL 235
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 112 FVGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
F GT Y PE +S + H P W+LGI L+++ G PF D E I+ L
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE-RDQE-----ILEAELH 251
Query: 171 FPKEPAVPATAKDLISQLLAKDPERR 196
FP + A LI + LA P R
Sbjct: 252 FPAHVSPDCCA--LIRRCLAPKPSSR 275
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 190 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 248
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + LI LA P R I++HP+ Q V
Sbjct: 249 FFRQ-------RVSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 288
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 113 VGTHEYLAPEIVSGEGHGS-PVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
VGT Y APE S E H + D + L L+E G P++G + A+I +A+
Sbjct: 196 VGTLYYXAPERFS-ESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHI-NQAIPR 253
Query: 172 PK--EPAVPATAKDLISQLLAKDPERR 196
P P +P +I++ AK+PE R
Sbjct: 254 PSTVRPGIPVAFDAVIARGXAKNPEDR 280
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDD 35
+RD+KPEN+LV +D L DF ++ D
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTD 186
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE + HG W+LGI L+++ G PF D E+ +
Sbjct: 163 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 221
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + LI LA P R I++HP+ Q V
Sbjct: 222 FFRQ-------RVSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 261
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
FVGT Y++PE ++ + D W+LG L+EL + PF
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP NV + ++ L DF L+
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q K+
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 245
Query: 193 PERR 196
PE R
Sbjct: 246 PEER 249
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q K+
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 193 PERR 196
PE R
Sbjct: 253 PEER 256
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
++ APE ++ S D W+ G+ ++E F YG P+RG+ A ++ +
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPA 253
Query: 176 AVPATAKDLISQLLAKDPERRLG 198
P DL++ D E R G
Sbjct: 254 GCPREMYDLMNLCWTYDVENRPG 276
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS--LKCDDSASNAQ 41
V+RDL NVL+ + + ++DF LS L+ D++ AQ
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
++ APE ++ S D W+ G+ ++E F YG P+RG+ A ++ +
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPA 253
Query: 176 AVPATAKDLISQLLAKDPERRLG 198
P DL++ D E R G
Sbjct: 254 GCPREMYDLMNLCWTYDVENRPG 276
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS--LKCDDSASNAQ 41
V+RDL NVL+ + + ++DF LS L+ D++ AQ
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 253
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + LI LA P R I++HP+ Q V
Sbjct: 254 FFRQ-------RVSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 293
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 254
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + LI LA P R I++HP+ Q V
Sbjct: 255 FFRQ-------RVSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 294
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q K+
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 193 PERR 196
PE R
Sbjct: 422 PEER 425
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q K+
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 193 PERR 196
PE R
Sbjct: 422 PEER 425
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
++ APE ++ S D W+ G+ ++E F YG P+RG+ A ++ +
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPA 251
Query: 176 AVPATAKDLISQLLAKDPERRLG 198
P DL++ D E R G
Sbjct: 252 GCPREMYDLMNLCWTYDVENRPG 274
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS--LKCDDSASNAQ 41
V+RDL NVL+ + + ++DF LS L+ D++ AQ
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 185
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 106 DVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
D F GT Y PE I HG W+LGI L+++ G PF D E+ +
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 254
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
R V + LI LA P R I++HP+ Q V
Sbjct: 255 FFRQ-------RVSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQDV 294
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q K+
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 193 PERR 196
PE R
Sbjct: 422 PEER 425
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q K+
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 193 PERR 196
PE R
Sbjct: 253 PEER 256
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
++ APE ++ S D W+ G+ ++E F YG P+RG+ A ++ +
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPA 237
Query: 176 AVPATAKDLISQLLAKDPERRLG 198
P DL++ D E R G
Sbjct: 238 GCPREMYDLMNLCWTYDVENRPG 260
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS--LKCDDSASNAQ 41
V+RDL NVL+ + + ++DF LS L+ D++ AQ
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ 171
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 134 DWWTLGIFLFELFY-GVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
D W+ GI L EL G P+ G+ + L + V R P P P + DL+ Q K+
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 248
Query: 193 PERR 196
PE R
Sbjct: 249 PEER 252
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
L +++RD+KP NVL+ + G + + DF +S DS +
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKT 211
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 17/108 (15%)
Query: 114 GTHEYLAPEIVSGE----GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
G Y+APE ++ E G+ D W+LGI + EL P+ D T + + +
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY---DSWGTPFQQLKQVV 271
Query: 170 EFPKEPAVPATA-----KDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
E P P +PA D SQ L K+ + R + HPFF
Sbjct: 272 EEP-SPQLPADKFSAEFVDFTSQCLKKNSKER----PTYPELMQHPFF 314
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
++ APE ++ S D W+ G+ ++E F YG P+RG+ A ++ +
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPA 595
Query: 176 AVPATAKDLISQLLAKDPERRLG 198
P DL++ D E R G
Sbjct: 596 GCPREMYDLMNLCWTYDVENRPG 618
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS--LKCDDSASNAQ 41
V+RDL NVL+ + + ++DF LS L+ D++ AQ
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
++ APE ++ S D W+ G+ ++E F YG P+RG+ A ++ +
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPA 237
Query: 176 AVPATAKDLISQLLAKDPERRLG 198
P DL++ D E R G
Sbjct: 238 GCPREMYDLMNLCWTYDVENRPG 260
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS--LKCDDSASNAQ 41
V+RDL NVL+ + + ++DF LS L+ D++ AQ
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 171
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
++ APE ++ S D W+ G+ ++E F YG P+RG+ A ++ +
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPA 596
Query: 176 AVPATAKDLISQLLAKDPERRLG 198
P DL++ D E R G
Sbjct: 597 GCPREMYDLMNLCWTYDVENRPG 619
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS--LKCDDSASNAQ 41
V+RDL NVL+ + + ++DF LS L+ D++ AQ
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 530
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
++ APE ++ S D W+ G+ ++E F YG P+RG+ A ++ +
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPA 233
Query: 176 AVPATAKDLISQLLAKDPERRLG 198
P DL++ D E R G
Sbjct: 234 GCPREMYDLMNLCWTYDVENRPG 256
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS--LKCDDSASNAQ 41
V+RDL NVL+ + + ++DF LS L+ D++ AQ
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
++ APE ++ S D W+ G+ ++E F YG P+RG+ A ++ +
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPA 231
Query: 176 AVPATAKDLISQLLAKDPERRLG 198
P DL++ D E R G
Sbjct: 232 GCPREMYDLMNLCWTYDVENRPG 254
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS--LKCDDSASNAQ 41
V+RDL NVL+ + + ++DF LS L+ D++ AQ
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 165
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTP 151
++ FVGT ++APE++ + D W+LGI EL G P
Sbjct: 171 IKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
++RD+K NVL+ G + L DF ++ + D+
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 169
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
++ APE ++ S D W+ G+ ++E F YG P+RG+ A ++ +
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPA 243
Query: 176 AVPATAKDLISQLLAKDPERRLG 198
P DL++ D E R G
Sbjct: 244 GCPREMYDLMNLCWTYDVENRPG 266
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS--LKCDDSASNAQ 41
V+RDL NVL+ + + ++DF LS L+ D++ AQ
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 177
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ +G + L DF L+
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLA 148
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 20/117 (17%)
Query: 111 SFVGTHEYLAPEIVSGEG-HGSPVDW----WTLGIFLFEL------FYGVTPFRGVDHEL 159
SF+GT ++APE+V E +P D+ W+LGI L E+ + + P R + L
Sbjct: 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL---L 232
Query: 160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN 216
+A L P + +V +D + L K+PE R A+ + HPF +
Sbjct: 233 KIAKSDPPTLLTPSKWSVE--FRDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 283
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
I++RDLK NVL+ +G I L DF +S K
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAK 166
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 34.3 bits (77), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 20/117 (17%)
Query: 111 SFVGTHEYLAPEIVSGEG-HGSPVDW----WTLGIFLFEL------FYGVTPFRGVDHEL 159
SF+GT ++APE+V E +P D+ W+LGI L E+ + + P R + L
Sbjct: 168 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL---L 224
Query: 160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN 216
+A L P + +V +D + L K+PE R A+ + HPF +
Sbjct: 225 KIAKSDPPTLLTPSKWSV--EFRDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 275
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
I++RDLK NVL+ +G I L DF +S K
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAK 158
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+G V+RDL N+L+ S+ ++DF LS +D A PI E + +
Sbjct: 166 MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA-Y 224
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 225 RKFTSASDVWSYGIV 239
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ +PE ++ S D W+ GI L+E+ YG P+ + ++ + V P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD 274
Query: 177 VPATAKDLISQLLAKDPERR 196
PA L+ KD R
Sbjct: 275 CPAALYQLMLDCWQKDRNNR 294
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 108 RSMSFVGTHEYLAPEIVSGE-GHGSPVDW----WTLGIFLFELFYGVTPFRGVDHELTLA 162
R F+GT ++APE+V E P D+ W+LGI L E+ P HEL
Sbjct: 191 RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH----HELNPM 246
Query: 163 NIVAR-ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
++ + A P A P+ L K E+ + + S + HPF
Sbjct: 247 RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
I++RDLK N+L DG I L DF +S K
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAK 184
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
I++RDLKP+N+L+ G + L DF L+
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLA 155
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 54/143 (37%), Gaps = 40/143 (27%)
Query: 104 PVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
PV+ S S V T Y AP+++ G + + +D W+ G L E+ G F G + E L
Sbjct: 161 PVNTFS-SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLK 219
Query: 163 NIVARALEFPKEPAVPATAK---------------------------------DLISQLL 189
++ + P E P+ K D + LL
Sbjct: 220 -LIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLL 278
Query: 190 AKDPERRLGSTKGASAIKHHPFF 212
+P+ RL + + HHP+F
Sbjct: 279 QLNPDMRLSAKQAL----HHPWF 297
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 33.9 bits (76), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 106 DVRSMSFVGTHEYLAPEIVS--------GEGHGSPVDWWTLGIFLFELFYGVTPFR 153
D + +S GT EYL P++ + +G+ VD W++G+ + G PFR
Sbjct: 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISD 45
GI++RDLKP N L+ D + + DF L+ + +S + I++D
Sbjct: 149 GIIHRDLKPANCLLNQDCSVKVCDFGLA-RTINSEKDTNIVND 190
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 33.9 bits (76), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS--LKCDDSASNA 40
+V+RDL NVLV+S H+ +TDF L+ L D++ +A
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA 178
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHE 158
++ PE + + + D W G+ L+E+F YG+ P+ G+ HE
Sbjct: 242 WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE 283
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.9 bits (76), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 33.9 bits (76), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 33.9 bits (76), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH-ELTLANIVARALEFP 172
G+ ++APE+ G + D ++ GI L+E+ PF + + V P
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 225
Query: 173 KEPAVPATAKDLISQLLAKDPERR 196
+P + L+++ +KDP +R
Sbjct: 226 LIKNLPKPIESLMTRCWSKDPSQR 249
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS-LKCDDSASN 39
L +++RD+KP NVL+ + G + + DF +S DD A +
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD 167
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 17/108 (15%)
Query: 114 GTHEYLAPEIVSGE----GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
G Y+APE ++ E G+ D W+LGI + EL P+ D T + + +
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY---DSWGTPFQQLKQVV 227
Query: 170 EFPKEPAVPATA-----KDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
E P P +PA D SQ L K+ + R + HPFF
Sbjct: 228 EEP-SPQLPADKFSAEFVDFTSQCLKKNSKER----PTYPELMQHPFF 270
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH-ELTLANIVARALEFP 172
G+ ++APE+ G + D ++ GI L+E+ PF + + V P
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 224
Query: 173 KEPAVPATAKDLISQLLAKDPERR 196
+P + L+++ +KDP +R
Sbjct: 225 LIKNLPKPIESLMTRCWSKDPSQR 248
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISD 45
GI++RDLKP N L+ D + + DF L+ + +S + I++D
Sbjct: 151 GIIHRDLKPANCLLNQDCSVKICDFGLA-RTINSDKDIHIVND 192
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+G V+RDL N+L+ S+ ++DF LS +D A PI E + +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA-Y 224
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 225 RKFTSASDVWSYGIV 239
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ +PE ++ S D W+ GI L+E+ YG P+ + ++ + V P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD 274
Query: 177 VPATAKDLISQLLAKDPERR 196
PA L+ KD R
Sbjct: 275 CPAALYQLMLDCWQKDRNNR 294
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+G V+RDL N+L+ S+ ++DF LS +D A PI E + +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA-Y 224
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 225 RKFTSASDVWSYGIV 239
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ +PE ++ S D W+ GI L+E+ YG P+ + ++ + V P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD 274
Query: 177 VPATAKDLISQLLAKDPERR 196
PA L+ KD R
Sbjct: 275 CPAALYQLMLDCWQKDRNNR 294
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+G V+RDL N+L+ S+ ++DF LS +D A PI E + +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA-Y 224
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 225 RKFTSASDVWSYGIV 239
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ +PE ++ S D W+ GI L+E+ YG P+ + ++ + V P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD 274
Query: 177 VPATAKDLISQLLAKDPERR 196
PA L+ KD R
Sbjct: 275 CPAALYQLMLDCWQKDRNNR 294
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+G V+RDL N+L+ S+ ++DF LS +D A PI E + +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA-Y 224
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 225 RKFTSASDVWSYGIV 239
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ +PE ++ S D W+ GI L+E+ YG P+ + ++ + V P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD 274
Query: 177 VPATAKDLISQLLAKDPERR 196
PA L+ KD R
Sbjct: 275 CPAALYQLMLDCWQKDRNNR 294
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+G V+RDL N+L+ S+ ++DF LS +D A PI E + +
Sbjct: 166 MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA-Y 224
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 225 RKFTSASDVWSYGIV 239
Score = 27.3 bits (59), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ +PE ++ S D W+ GI L+E+ YG P+ + ++ + V P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD 274
Query: 177 VPATAKDLISQLLAKDPERR 196
PA L+ KD R
Sbjct: 275 CPAALYQLMLDCWQKDRNNR 294
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+G V+RDL N+L+ S+ ++DF LS +D A PI E + +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA-Y 224
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 225 RKFTSASDVWSYGIV 239
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ +PE ++ S D W+ GI L+E+ YG P+ + ++ + V P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD 274
Query: 177 VPATAKDLISQLLAKDPERR 196
PA L+ KD R
Sbjct: 275 CPAALYQLMLDCWQKDRNNR 294
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+G V+RDL N+L+ S+ ++DF LS +D A PI E + +
Sbjct: 164 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA-Y 222
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 223 RKFTSASDVWSYGIV 237
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ +PE ++ S D W+ GI L+E+ YG P+ + ++ + V P
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD 272
Query: 177 VPATAKDLISQLLAKDPERR 196
PA L+ KD R
Sbjct: 273 CPAALYQLMLDCWQKDRNNR 292
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 114 GTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 114 GTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 114 GTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 111 SFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 166 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 55/144 (38%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+ I++RDL N LVR + ++++ DF L A+++ D+ L+
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGL----------ARLMVDEKTQPEGLR------- 169
Query: 62 PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
S +P RK++ + VG ++AP
Sbjct: 170 ------------------SLKKPDRKKR--------------------YTVVGNPYWMAP 191
Query: 122 EIVSGEGHGSPVDWWTLGIFLFEL 145
E+++G + VD ++ GI L E+
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+G V+RDL N+L+ S+ ++DF LS +D A PI E + +
Sbjct: 154 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA-Y 212
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 213 RKFTSASDVWSYGIV 227
Score = 27.3 bits (59), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
+ +PE ++ S D W+ GI L+E+ YG P+ + ++ + V P
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPM 261
Query: 176 AVPATAKDLISQLLAKDPERR 196
PA L+ KD R
Sbjct: 262 DCPAALYQLMLDCWQKDRNNR 282
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 106 DVRSMSF--VGTH-----EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTP-FRGVD 156
DV S + VG H ++ PE + + D W+ G+ L+E+F YG P F+ +
Sbjct: 182 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 241
Query: 157 HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRL 197
E+ R LE P+ P D++ ++P++RL
Sbjct: 242 TEVIECITQGRVLERPR--VCPKEVYDVMLGCWQREPQQRL 280
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 114 GTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 114 GTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF 152
GT Y+APE++ E H PVD W+ GI L + G P+
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+G V+RDL N+LV S+ ++DF LS +D + P+ E + +
Sbjct: 164 MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPE-AIQY 222
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 223 RKFTSASDVWSYGIV 237
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+G V+RDL N+L+ S+ ++DF LS +D A PI E + +
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA-Y 195
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 196 RKFTSASDVWSYGIV 210
Score = 27.3 bits (59), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ +PE ++ S D W+ GI L+E+ YG P+ + ++ + V P
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD 245
Query: 177 VPATAKDLISQLLAKDPERR 196
PA L+ KD R
Sbjct: 246 CPAALYQLMLDCWQKDRNNR 265
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 21/27 (77%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ +G + + DF L+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLA 147
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 37/135 (27%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA-- 166
THE Y AP+++ G + + + +D W++G E+ G F GV L I
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRIL 217
Query: 167 ---------RALEFPK--------EP--------AVPATAKDLISQLLAKDPERRLGSTK 201
E PK EP + + DL+S++L DP +R+ + +
Sbjct: 218 GTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQ 277
Query: 202 GASAIKHHPFFQGVN 216
H +F+ N
Sbjct: 278 ALE----HAYFKENN 288
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+G V+RDL N+L+ S+ ++DF LS +D A PI E + +
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA-Y 195
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 196 RKFTSASDVWSYGIV 210
Score = 27.3 bits (59), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ +PE ++ S D W+ GI L+E+ YG P+ + ++ + V P
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD 245
Query: 177 VPATAKDLISQLLAKDPERR 196
PA L+ KD R
Sbjct: 246 CPAALYQLMLDCWQKDRNNR 265
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 21/27 (77%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ +G + + DF L+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLA 147
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 37/135 (27%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA-- 166
THE Y AP+++ G + + + +D W++G E+ G F GV L I
Sbjct: 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL 217
Query: 167 ---------RALEFPK--------EP--------AVPATAKDLISQLLAKDPERRLGSTK 201
E PK EP + + DL+S++L DP +R+ + +
Sbjct: 218 GTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQ 277
Query: 202 GASAIKHHPFFQGVN 216
H +F+ N
Sbjct: 278 ALE----HAYFKENN 288
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 21/27 (77%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ +G + + DF L+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLA 147
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 37/135 (27%)
Query: 115 THE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA-- 166
THE Y AP+++ G + + + +D W++G E+ G F GV L I
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL 217
Query: 167 ---------RALEFPK--------EP--------AVPATAKDLISQLLAKDPERRLGSTK 201
E PK EP + + DL+S++L DP +R+ + +
Sbjct: 218 GTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQ 277
Query: 202 GASAIKHHPFFQGVN 216
H +F+ N
Sbjct: 278 ALE----HAYFKENN 288
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ G + L DF L+
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLA 147
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQI 42
I +RDLK +N+LV+ +G + D L+++ D + I
Sbjct: 129 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 168
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQI 42
I +RDLK +N+LV+ +G + D L+++ D + I
Sbjct: 134 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 173
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQI 42
I +RDLK +N+LV+ +G + D L+++ D + I
Sbjct: 131 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 170
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
LG V+RDL NVLV S+ ++DF LS +D A + PI E +
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA-F 228
Query: 62 PPFTSASCIIPNCIV 76
F+SAS + +V
Sbjct: 229 RTFSSASDVWSFGVV 243
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
+ APE ++ S D W+ G+ ++E L YG P+ + + +++ V P
Sbjct: 219 RWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS-VEEGYRLPAPM 277
Query: 176 AVPATAKDLISQLLAKDPERR 196
P L+ KD +R
Sbjct: 278 GCPHALHQLMLDCWHKDRAQR 298
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 22/132 (16%)
Query: 109 SMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI--VA 166
S S GT E++APE++ E D ++ G+ L+EL P+ ++ +A +
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC 255
Query: 167 RALEFPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTT 224
+ LE P+ P V A +I +P +R P F + LLR
Sbjct: 256 KRLEIPRNLNPQVAA----IIEGCWTNEPWKR-------------PSFATIM-DLLRPLI 297
Query: 225 PPFVPPPFNREL 236
VPPP +L
Sbjct: 298 KSAVPPPNRSDL 309
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS-LKCDDSASN 39
L +++RD+KP NVL+ + G + DF +S DD A +
Sbjct: 156 LSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKD 194
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQI 42
I +RDLK +N+LV+ +G + D L+++ D + I
Sbjct: 154 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 193
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQI 42
I +RDLK +N+LV+ +G + D L+++ D + I
Sbjct: 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 167
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIA 51
I +RDLK +N+LV+ +G + D L++ S S Q+ NP +
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVM--HSQSTNQLDVGNNPRVG 179
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
++APE + D W+ G+ L+E+F YG+ P+ G ++ + I R + P
Sbjct: 195 RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV-LPCPD 253
Query: 176 AVPATAKDLISQLLAKDPERR 196
PA L+ + + P RR
Sbjct: 254 DCPAWVYALMIECWNEFPSRR 274
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIA 51
I +RDLK +N+LV+ +G + D L++ S S Q+ NP +
Sbjct: 162 AIAHRDLKSKNILVKKNGQCCIADLGLAVM--HSQSTNQLDVGNNPRVG 208
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
++APE + D W+ G+ L+E+F YG+ P+ G ++ + I R + P
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV-LPCPDD 271
Query: 177 VPATAKDLISQLLAKDPERR 196
PA L+ + + P RR
Sbjct: 272 CPAWVYALMIECWNEFPSRR 291
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQI 42
I +RDLK +N+LV+ +G + D L+++ D + I
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 206
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+G V+RDL N+L+ S+ ++DF L+ +D A PI E + +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIA-Y 224
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 225 RKFTSASDVWSYGIV 239
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ +PE ++ S D W+ GI L+E+ YG P+ + ++ + V P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD 274
Query: 177 VPATAKDLISQLLAKDPERR 196
PA L+ KD R
Sbjct: 275 CPAALYQLMLDCWQKDRNNR 294
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 84/218 (38%), Gaps = 51/218 (23%)
Query: 9 LKPENVLVRSDGHIMLTDF----DLSLKCDDSASNAQIISDQNPPIAVLQNE-------- 56
+K V V D IM+ ++ DL+ +A ++++ NPP + Q++
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 57 -----YLVD----HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDV 107
YL H + +C++ ++ + F R DV
Sbjct: 138 AAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR-------------------DV 178
Query: 108 RSMSF--VGTH-----EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHEL 159
S + VG H ++ PE + + D W+LG+ L+E+F YG P+ + +
Sbjct: 179 YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE 238
Query: 160 TLANIV-ARALEFPKEPAVPATAKDLISQLLAKDPERR 196
+ I R L+ P+ P +L+ ++P R
Sbjct: 239 VIECITQGRVLQRPR--TCPQEVYELMLGCWQREPHMR 274
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIA 51
I +RDLK +N+LV+ +G + D L++ S S Q+ NP +
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVM--HSQSTNQLDVGNNPRVG 179
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 21/28 (75%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP+N+L+ +G + L +F L+
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLA 148
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
LG V+RDL NVLV S+ ++DF LS +D A + PI E +
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA-F 228
Query: 62 PPFTSASCIIPNCIV 76
F+SAS + +V
Sbjct: 229 RTFSSASDVWSFGVV 243
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
+ APE ++ S D W+ G+ ++E L YG P+ + + +++ V P
Sbjct: 219 RWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS-VEEGYRLPAPM 277
Query: 176 AVPATAKDLISQLLAKDPERR 196
P L+ KD +R
Sbjct: 278 GCPHALHQLMLDCWHKDRAQR 298
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 144 LVHRDLAARNVLVKTPQHVKITDFGLA 170
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 148 LVHRDLAARNVLVKTPQHVKITDFGLA 174
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGLA 168
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+G V+RDL N+L+ S+ ++DF LS +D A PI E +
Sbjct: 143 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA-F 201
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 202 RKFTSASDVWSYGIV 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 163 LVHRDLAARNVLVKTPQHVKITDFGLA 189
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 135 LVHRDLAARNVLVKTPQHVKITDFGLA 161
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 172 LVHRDLAARNVLVKTPQHVKITDFGLA 198
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+V+RDL NVLV++ H+ +TDF L+
Sbjct: 132 LVHRDLAARNVLVKTPQHVKITDFGLA 158
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 56/167 (33%), Gaps = 44/167 (26%)
Query: 2 LGIVYRDLKPENVLV-RSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
GIV+RD+KP N L R L DF L+ D+ ++
Sbjct: 136 FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK---------------------IE 174
Query: 61 HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLA 120
F + C S +R Q P GT + A
Sbjct: 175 LLKFVQSEAQQERCSQNKCSICLSRR-------QQVAPR-------------AGTPGFRA 214
Query: 121 PEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT-LANIV 165
PE+++ + +D W+ G+ L G PF +LT LA I+
Sbjct: 215 PEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIM 261
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+G V+RDL N+L+ S+ ++DF L +D A PI E + +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA-Y 224
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 225 RKFTSASDVWSYGIV 239
Score = 27.3 bits (59), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ +PE ++ S D W+ GI L+E+ YG P+ + ++ + V P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD 274
Query: 177 VPATAKDLISQLLAKDPERR 196
PA L+ KD R
Sbjct: 275 CPAALYQLMLDCWQKDRNNR 294
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPI 50
V+RDL NVLV S+ + + DF L+ + + D++ P+
Sbjct: 148 VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 193
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + + Y +PE++ G + +D W+LG L E+ G F G + E+ N +
Sbjct: 195 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN-EVDQMNKIVE 253
Query: 168 ALEFP 172
L P
Sbjct: 254 VLGIP 258
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + + Y +PE++ G + +D W+LG L E+ G F G + E+ N +
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN-EVDQMNKIVE 272
Query: 168 ALEFP 172
L P
Sbjct: 273 VLGIP 277
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
I++RD+K NVL+ DG + L DF L+ + A N+Q
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLA-RAFSLAKNSQ 182
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLS 30
V+RDL N+LV S+ H+ + DF L+
Sbjct: 149 VHRDLAARNILVESEAHVKIADFGLA 174
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPI 50
V+RDL NVLV S+ + + DF L+ + + D++ P+
Sbjct: 136 VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 181
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
R + + Y +PE++ G + +D W+LG L E+ G F G + E+ N +
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN-EVDQMNKIVE 272
Query: 168 ALEFP 172
L P
Sbjct: 273 VLGIP 277
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 106 DVRSMSFVGTHEYLAPEIVS--------GEGHGSPVDWWTLGIFLFELFYGVTPFR 153
D + + GT EYL P++ + +G+ VD W++G+ + G PFR
Sbjct: 169 DEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+ V+RDL N+LV S+ ++DF LS +D S PI E + +
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE-AISY 224
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 225 RKFTSASDVWSFGIV 239
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV-DHELTLANIVARALEFPKEP 175
+ APE +S S D W+ GI ++E+ YG P+ + +HE+ A + P
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA--INDGFRLPTPM 273
Query: 176 AVPATAKDLISQLLAKDPERR 196
P+ L+ Q ++ RR
Sbjct: 274 DCPSAIYQLMMQCWQQERARR 294
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
I++RDLKP N+L+ +G + L DF L+
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLA 159
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLS 30
V+RDL N+LV S+ H+ + DF L+
Sbjct: 137 VHRDLAARNILVESEAHVKIADFGLA 162
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLS 30
V+RDL N+LV S+ H+ + DF L+
Sbjct: 136 VHRDLAARNILVESEAHVKIADFGLA 161
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
I++RD+K NVL+ DG + L DF L+ + A N+Q
Sbjct: 145 ILHRDMKAANVLITRDGVLKLADFGLA-RAFSLAKNSQ 181
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYG---VTPFRGVDH---ELTLANIVA 166
+ T +Y + E++ G G+ +P D W+ FEL G P G D+ E +A+I+
Sbjct: 246 IQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIE 305
Query: 167 RALEFPKEPAVPA 179
P+ A+
Sbjct: 306 LLGSIPRHFALSG 318
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
I++RD+K NVL+ DG + L DF L+ + A N+Q
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLA-RAFSLAKNSQ 182
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
I++RD+K NVL+ DG + L DF L+ + A N+Q
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLA-RAFSLAKNSQ 182
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLS 30
V+RDL N+LV S+ H+ + DF L+
Sbjct: 133 VHRDLAARNILVESEAHVKIADFGLA 158
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDF 27
I++RDLK EN+L+ + G I L DF
Sbjct: 159 IIHRDLKVENLLLSNQGTIKLCDF 182
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
I +RD K +NVL++SD +L DF L+++
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGLAVR 172
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 19/63 (30%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
I +RDLK +N+LV+ +G + D L++K ISD N VD P
Sbjct: 162 AIAHRDLKSKNILVKKNGTCCIADLGLAVK---------FISDTNE----------VDIP 202
Query: 63 PFT 65
P T
Sbjct: 203 PNT 205
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RD+K +NVL+ + + L DF +S + D
Sbjct: 150 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPV-----DWWTLGIFLFELFYGVTPF 152
R +F+GT ++APE+++ + + D W+LGI E+ G P
Sbjct: 185 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 27 FDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD----HPPFTSASCIIPNCIVPAVSCF 82
D +C+ NA ++ I+ EYL H + +C++ + V+ F
Sbjct: 101 LDYLRECNRQEVNAVVLLYMATQISSAM-EYLEKKNFIHRDLAARNCLVGENHLVKVADF 159
Query: 83 RPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIF 141
R T H+G +F ++ + APE ++ D W G+
Sbjct: 160 GLSRLMTGDTYTAHAGAKFPIK--------------WTAPESLAYNKFSIKSDVWAFGVL 205
Query: 142 LFEL-FYGVTPFRGVD 156
L+E+ YG++P+ G+D
Sbjct: 206 LWEIATYGMSPYPGID 221
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 27 FDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD----HPPFTSASCIIPNCIVPAVSCF 82
D +C+ NA ++ I+ EYL H + +C++ + V+ F
Sbjct: 102 LDYLRECNRQEVNAVVLLYMATQISSAM-EYLEKKNFIHRDLAARNCLVGENHLVKVADF 160
Query: 83 RPKRKRKKKTGQ-HSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIF 141
R T H+G +F ++ + APE ++ D W G+
Sbjct: 161 GLSRLMTGDTXTAHAGAKFPIK--------------WTAPESLAYNKFSIKSDVWAFGVL 206
Query: 142 LFEL-FYGVTPFRGVD 156
L+E+ YG++P+ G+D
Sbjct: 207 LWEIATYGMSPYPGID 222
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 27 FDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD----HPPFTSASCIIPNCIVPAVSCF 82
D +C+ NA ++ I+ EYL H + +C++ + V+ F
Sbjct: 102 LDYLRECNRQEVNAVVLLYMATQISSAM-EYLEKKNFIHRDLAARNCLVGENHLVKVADF 160
Query: 83 RPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIF 141
R T H+G +F ++ + APE ++ D W G+
Sbjct: 161 GLSRLMTGDTYTAHAGAKFPIK--------------WTAPESLAYNKFSIKSDVWAFGVL 206
Query: 142 LFEL-FYGVTPFRGVD 156
L+E+ YG++P+ G+D
Sbjct: 207 LWEIATYGMSPYPGID 222
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 27 FDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD----HPPFTSASCIIPNCIVPAVSCF 82
D +C+ NA ++ I+ EYL H + +C++ + V+ F
Sbjct: 102 LDYLRECNRQEVNAVVLLYMATQISSAM-EYLEKKNFIHRDLAARNCLVGENHLVKVADF 160
Query: 83 RPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIF 141
R T H+G +F ++ + APE ++ D W G+
Sbjct: 161 GLSRLMTGDTYTAHAGAKFPIK--------------WTAPESLAYNKFSIKSDVWAFGVL 206
Query: 142 LFEL-FYGVTPFRGVD 156
L+E+ YG++P+ G+D
Sbjct: 207 LWEIATYGMSPYPGID 222
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 31.2 bits (69), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 27 FDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD----HPPFTSASCIIPNCIVPAVSCF 82
D +C+ NA ++ I+ EYL H + +C++ + V+ F
Sbjct: 97 LDYLRECNRQEVNAVVLLYMATQISSAM-EYLEKKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 83 RPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIF 141
R T H+G +F ++ + APE ++ D W G+
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPIK--------------WTAPESLAYNKFSIKSDVWAFGVL 201
Query: 142 LFEL-FYGVTPFRGVD 156
L+E+ YG++P+ G+D
Sbjct: 202 LWEIATYGMSPYPGID 217
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 31.2 bits (69), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 27 FDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD----HPPFTSASCIIPNCIVPAVSCF 82
D +C+ NA ++ I+ EYL H + +C++ + V+ F
Sbjct: 97 LDYLRECNRQEVNAVVLLYMATQISSAM-EYLEKKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 83 RPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIF 141
R T H+G +F ++ + APE ++ D W G+
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPIK--------------WTAPESLAYNKFSIKSDVWAFGVL 201
Query: 142 LFEL-FYGVTPFRGVD 156
L+E+ YG++P+ G+D
Sbjct: 202 LWEIATYGMSPYPGID 217
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 31.2 bits (69), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 27 FDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD----HPPFTSASCIIPNCIVPAVSCF 82
D +C+ NA ++ I+ EYL H + +C++ + V+ F
Sbjct: 99 LDYLRECNRQEVNAVVLLYMATQISSAM-EYLEKKNFIHRDLAARNCLVGENHLVKVADF 157
Query: 83 RPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIF 141
R T H+G +F ++ + APE ++ D W G+
Sbjct: 158 GLSRLMTGDTYTAHAGAKFPIK--------------WTAPESLAYNKFSIKSDVWAFGVL 203
Query: 142 LFEL-FYGVTPFRGVD 156
L+E+ YG++P+ G+D
Sbjct: 204 LWEIATYGMSPYPGID 219
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 61 HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYL 119
H + +C++ V V+ F R T H+G +F ++ +
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIK--------------WT 198
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFEL-FYGVTPFRGVD 156
APE ++ D W G+ L+E+ YG++P+ G+D
Sbjct: 199 APESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID 236
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 27 FDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD----HPPFTSASCIIPNCIVPAVSCF 82
D +C+ NA ++ I+ EYL H + +C++ + V+ F
Sbjct: 99 LDYLRECNRQEVNAVVLLYMATQISSAM-EYLEKKNFIHRDLAARNCLVGENHLVKVADF 157
Query: 83 RPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIF 141
R T H+G +F ++ + APE ++ D W G+
Sbjct: 158 GLSRLMTGDTYTAHAGAKFPIK--------------WTAPESLAYNKFSIKSDVWAFGVL 203
Query: 142 LFEL-FYGVTPFRGVD 156
L+E+ YG++P+ G+D
Sbjct: 204 LWEIATYGMSPYPGID 219
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 27 FDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD----HPPFTSASCIIPNCIVPAVSCF 82
D +C+ NA ++ I+ EYL H + +C++ + V+ F
Sbjct: 102 LDYLRECNRQEVNAVVLLYMATQISSAM-EYLEKKNFIHRDLAARNCLVGENHLVKVADF 160
Query: 83 RPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIF 141
R T H+G +F ++ + APE ++ D W G+
Sbjct: 161 GLSRLMTGDTYTAHAGAKFPIK--------------WTAPESLAYNKFSIKSDVWAFGVL 206
Query: 142 LFEL-FYGVTPFRGVD 156
L+E+ YG++P+ G+D
Sbjct: 207 LWEIATYGMSPYPGID 222
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 22/132 (16%)
Query: 109 SMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI--VA 166
S GT E++APE++ E D ++ G+ L+EL P+ ++ +A +
Sbjct: 196 SKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC 255
Query: 167 RALEFPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTT 224
+ LE P+ P V A +I +P +R P F + LLR
Sbjct: 256 KRLEIPRNLNPQVAA----IIEGCWTNEPWKR-------------PSFATIM-DLLRPLI 297
Query: 225 PPFVPPPFNREL 236
VPPP +L
Sbjct: 298 KSAVPPPNRSDL 309
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 27 FDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD----HPPFTSASCIIPNCIVPAVSCF 82
D +C+ NA ++ I+ EYL H + +C++ + V+ F
Sbjct: 110 LDYLRECNRQEVNAVVLLYMATQISSAM-EYLEKKNFIHRDLAARNCLVGENHLVKVADF 168
Query: 83 RPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIF 141
R T H+G +F ++ + APE ++ D W G+
Sbjct: 169 GLSRLMTGDTYTAHAGAKFPIK--------------WTAPESLAYNKFSIKSDVWAFGVL 214
Query: 142 LFEL-FYGVTPFRGVD 156
L+E+ YG++P+ G+D
Sbjct: 215 LWEIATYGMSPYPGID 230
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 27 FDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD----HPPFTSASCIIPNCIVPAVSCF 82
D +C+ NA ++ I+ EYL H + +C++ + V+ F
Sbjct: 98 LDYLRECNRQEVNAVVLLYMATQISSAM-EYLEKKNFIHRDLAARNCLVGENHLVKVADF 156
Query: 83 RPKRKRKKKTGQ-HSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIF 141
R T H+G +F ++ + APE ++ D W G+
Sbjct: 157 GLSRLMTGDTXTAHAGAKFPIK--------------WTAPESLAYNKFSIKSDVWAFGVL 202
Query: 142 LFEL-FYGVTPFRGVD 156
L+E+ YG++P+ G+D
Sbjct: 203 LWEIATYGMSPYPGID 218
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE + + D W+ GI L+E+F G+ P+ G+ +V + +
Sbjct: 233 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA 292
Query: 176 AVPATAKDLISQLLAKDPERR 196
P ++ A +P R
Sbjct: 293 FAPKNIYSIMQACWALEPTHR 313
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 27 FDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD----HPPFTSASCIIPNCIVPAVSCF 82
D +C+ NA ++ I+ EYL H + +C++ + V+ F
Sbjct: 301 LDYLRECNRQEVNAVVLLYMATQISSAM-EYLEKKNFIHRNLAARNCLVGENHLVKVADF 359
Query: 83 RPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIF 141
R T H+G +F ++ + APE ++ D W G+
Sbjct: 360 GLSRLMTGDTYTAHAGAKFPIK--------------WTAPESLAYNKFSIKSDVWAFGVL 405
Query: 142 LFEL-FYGVTPFRGVD 156
L+E+ YG++P+ G+D
Sbjct: 406 LWEIATYGMSPYPGID 421
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 27 FDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD----HPPFTSASCIIPNCIVPAVSCF 82
D +C+ NA ++ I+ EYL H + +C++ + V+ F
Sbjct: 343 LDYLRECNRQEVNAVVLLYMATQISSAM-EYLEKKNFIHRNLAARNCLVGENHLVKVADF 401
Query: 83 RPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIF 141
R T H+G +F ++ + APE ++ D W G+
Sbjct: 402 GLSRLMTGDTYTAHAGAKFPIK--------------WTAPESLAYNKFSIKSDVWAFGVL 447
Query: 142 LFEL-FYGVTPFRGVD 156
L+E+ YG++P+ G+D
Sbjct: 448 LWEIATYGMSPYPGID 463
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 30.8 bits (68), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 112 FVGTHEYLAPEIVSGEGHGS---PVDWWTLGIFLFEL 145
FVGT ++APE++ G VD W+LGI EL
Sbjct: 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 30.8 bits (68), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDF 27
+V+RDL NVLV++ H+ +TDF
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDF 163
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 30.8 bits (68), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 112 FVGTHEYLAPEIVSGEGHGS---PVDWWTLGIFLFEL 145
FVGT ++APE++ G VD W+LGI EL
Sbjct: 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 30.8 bits (68), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDF 27
+V+RDL NVLV++ H+ +TDF
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDF 163
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 30.8 bits (68), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDF 27
+V+RDL NVLV++ H+ +TDF
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDF 168
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 30.8 bits (68), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDF 27
+V+RDL NVLV++ H+ +TDF
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDF 163
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 30.8 bits (68), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDF 27
+V+RDL NVLV++ H+ +TDF
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDF 161
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDF 27
+V+RDL NVLV++ H+ +TDF
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDF 165
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE + + D W+ GI L+E+F G+ P+ G+ +V + +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA 290
Query: 176 AVPATAKDLISQLLAKDPERR 196
P ++ A +P R
Sbjct: 291 FAPKNIYSIMQACWALEPTHR 311
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 30.4 bits (67), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + + + D W+ G+ L+E+F G +P+ GV
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGV 305
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 30.4 bits (67), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYG 148
+ T +Y + E++ G G+ +P D W+ FEL G
Sbjct: 254 IQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATG 289
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 30.4 bits (67), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 114 GTHEYLAPEIV---SGEGHGSPVDWWTLG-IFLFELFYGVTPFRGVDHELTLANIVARAL 169
GT + APE++ + +D +++G +F + L G PF D +NI+
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG--DKYSRESNIIRGIF 269
Query: 170 EFPK-----EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
+ + ++ A A DLISQ++ DP +R + K + HP F
Sbjct: 270 SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK----VLRHPLF 313
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 13/46 (28%)
Query: 2 LGIVYRDLKPENVLVRSDG-------------HIMLTDFDLSLKCD 34
L I++RDLKP+N+LV + I+++DF L K D
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 30.4 bits (67), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE + + D W+ GI L+E+F G+ P+ G+ +V + +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA 290
Query: 176 AVPATAKDLISQLLAKDPERR 196
P ++ A +P R
Sbjct: 291 FAPKNIYSIMQACWALEPTHR 311
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYG 148
+ T +Y + E++ G G+ +P D W+ FEL G
Sbjct: 238 IQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATG 273
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ APE ++ S D W+ GI ++E+ +G P+ + ++ + N + + P P
Sbjct: 189 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ-DVINAIEQDYRLPPPPD 247
Query: 177 VPATAKDLISQLLAKDPERR 196
P + L+ KD R
Sbjct: 248 CPTSLHQLMLDCWQKDRNAR 267
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
+ V+RDL N+LV S+ ++DF LS ++++S+
Sbjct: 137 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 174
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 114 GTHEYLAPEIV---SGEGHGSPVDWWTLG-IFLFELFYGVTPFRGVDHELTLANIVARAL 169
GT + APE++ + +D +++G +F + L G PF D +NI+
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG--DKYSRESNIIRGIF 269
Query: 170 EFPK-----EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
+ + ++ A A DLISQ++ DP +R + K + HP F
Sbjct: 270 SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK----VLRHPLF 313
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 13/46 (28%)
Query: 2 LGIVYRDLKPENVLVRSDG-------------HIMLTDFDLSLKCD 34
L I++RDLKP+N+LV + I+++DF L K D
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 30.4 bits (67), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 30.4 bits (67), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE + + D W+ GI L+E+F G+ P+ G+ +V + +
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA 278
Query: 176 AVPATAKDLISQLLAKDPERR 196
P ++ A +P R
Sbjct: 279 FAPKNIYSIMQACWALEPTHR 299
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 30.4 bits (67), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+ +V+RDL N+LV + ++DF LS + S + S P+ + E L DH
Sbjct: 169 MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVK-RSQGRIPVKWMAIESLFDH 227
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ APE ++ S D W+ GI ++E+ +G P+ + ++ + N + + P P
Sbjct: 187 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ-DVINAIEQDYRLPPPPD 245
Query: 177 VPATAKDLISQLLAKDPERR 196
P + L+ KD R
Sbjct: 246 CPTSLHQLMLDCWQKDRNAR 265
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNE-YLVD 60
+ V+RDL N+LV S+ ++DF LS ++++S+ S I + +
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 61 HPPFTSAS 68
FTSAS
Sbjct: 195 FRKFTSAS 202
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE + + D W+ GI L+E+F G+ P+ G+ +V + +
Sbjct: 225 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA 284
Query: 176 AVPATAKDLISQLLAKDPERR 196
P ++ A +P R
Sbjct: 285 FAPKNIYSIMQACWALEPTHR 305
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
+++APE + + D W+ GI L+E+F G+ P+ G+ +V + +
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA 286
Query: 176 AVPATAKDLISQLLAKDPERR 196
P ++ A +P R
Sbjct: 287 FAPKNIYSIMQACWALEPTHR 307
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 304
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 306
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 256
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+ V+RDL N+LV S+ ++DF +S +D A PI E + +
Sbjct: 150 MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA-Y 208
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 209 RKFTSASDVWSYGIV 223
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNE-YLVD 60
+ V+RDL N+LV S+ ++DF LS +D S+ S I + +
Sbjct: 154 MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 61 HPPFTSASCIIPNCIV 76
+ FTSAS + IV
Sbjct: 214 YRKFTSASDVWSYGIV 229
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
+ APE + S D W+ GI ++E+ YG P+ + ++ + N + + P
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-DVINAIEQDYRLPPPMD 264
Query: 177 VPATAKDLISQLLAKDPERR 196
P+ L+ KD R
Sbjct: 265 CPSALHQLMLDCWQKDRNHR 284
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 250
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 13/51 (25%)
Query: 2 LGIVYRDLKPENVLVRSDG-------------HIMLTDFDLSLKCDDSASN 39
L I++RDLKP+N+LV + I+++DF L K D S+
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 19/112 (16%)
Query: 114 GTHEYLAPEIVSGEGH-------GSPVDWWTLG-IFLFELFYGVTPFRGVDHELTLANIV 165
GT + APE++ + +D +++G +F + L G PF D +NI+
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG--DKYSRESNII 251
Query: 166 ARALEFPK-----EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
+ + ++ A A DLISQ++ DP +R + K + HP F
Sbjct: 252 RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK----VLRHPLF 299
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+ V+RDL N+LV S+ ++DF +S +D A PI E + +
Sbjct: 129 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA-Y 187
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 188 RKFTSASDVWSYGIV 202
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 299
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+ V+RDL N+LV S+ ++DF +S +D A PI E + +
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA-Y 193
Query: 62 PPFTSASCIIPNCIV 76
FTSAS + IV
Sbjct: 194 RKFTSASDVWSYGIV 208
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 297
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+ +V+RDL N+LV + ++DF LS + S + S P+ + E L DH
Sbjct: 169 MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVK-RSQGRIPVKWMAIESLFDH 227
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTP----FRG 154
GT ++APE+V G + VD W+ + + G P FRG
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 297
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 61 HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYL 119
H + +C++ + V+ F R T H+G +F ++ +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--------------WT 184
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFEL-FYGVTPFRGVD 156
APE ++ D W G+ L+E+ YG++P+ G+D
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTP----FRG 154
GT ++APE+V G + VD W+ + + G P FRG
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 278
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
Query: 2 LGIVYRDLKPENVLV---RSDGHI--MLTDFDLSLK 32
L IV+RDLKP N+L+ + G I M++DF L K
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 61 HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYL 119
H + +C++ + V+ F R T H+G +F ++ +
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--------------WT 386
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFEL-FYGVTPFRGVD 156
APE ++ D W G+ L+E+ YG++P+ G+D
Sbjct: 387 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 424
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 61 HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQ-HSGPEFVVEPVDVRSMSFVGTHEYL 119
H + +C++ + V+ F R T H+G +F ++ +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK--------------WT 177
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFEL-FYGVTPFRGVD 156
APE ++ D W G+ L+E+ YG++P+ G+D
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 61 HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYL 119
H + +C++ + V+ F R T H+G +F ++ +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--------------WT 179
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFEL-FYGVTPFRGVD 156
APE ++ D W G+ L+E+ YG++P+ G+D
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 61 HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYL 119
H + +C++ + V+ F R T H+G +F ++ +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--------------WT 179
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFEL-FYGVTPFRGVD 156
APE ++ D W G+ L+E+ YG++P+ G+D
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 250
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 61 HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQ-HSGPEFVVEPVDVRSMSFVGTHEYL 119
H + +C++ + V+ F R T H+G +F ++ +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK--------------WT 177
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFEL-FYGVTPFRGVD 156
APE ++ D W G+ L+E+ YG++P+ G+D
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 19/112 (16%)
Query: 114 GTHEYLAPEIVSGEGH-------GSPVDWWTLG-IFLFELFYGVTPFRGVDHELTLANIV 165
GT + APE++ + +D +++G +F + L G PF D +NI+
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG--DKYSRESNII 251
Query: 166 ARALEFPK-----EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
+ + ++ A A DLISQ++ DP +R + K + HP F
Sbjct: 252 RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK----VLRHPLF 299
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 13/46 (28%)
Query: 2 LGIVYRDLKPENVLVRSDG-------------HIMLTDFDLSLKCD 34
L I++RDLKP+N+LV + I+++DF L K D
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 61 HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYL 119
H + +C++ + V+ F R T H+G +F ++ +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--------------WT 179
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFEL-FYGVTPFRGVD 156
APE ++ D W G+ L+E+ YG++P+ G+D
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 61 HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYL 119
H + +C++ + V+ F R T H+G +F ++ +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIK--------------WT 177
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFEL-FYGVTPFRGVD 156
APE ++ D W G+ L+E+ YG++P+ G+D
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 61 HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKT-GQHSGPEFVVEPVDVRSMSFVGTHEYL 119
H + +C++ + V+ F R T H+G +F ++ +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--------------WT 179
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFEL-FYGVTPFRGVD 156
APE ++ D W G+ L+E+ YG++P+ G+D
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
+ +V+RDL N+LV + ++DF LS + S + S P+ + E L DH
Sbjct: 169 MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVK-RSQGRIPVKWMAIESLFDH 227
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDH-ELTLANIVARALEFPKE 174
++ APE ++ D W+ GI L E+ YG P+ G+ + E+ A + R P+
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA--LERGYRMPRP 391
Query: 175 PAVPATAKDLISQLLAKDPERR 196
P +++ + PE R
Sbjct: 392 ENCPEELYNIMMRCWKNRPEER 413
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 4 IVYRDLKPENVLVRSDGH-----IMLTDFDLSLKCDDSASNAQI 42
++YRD+KPEN L+ G+ I + DF L+ + D + I
Sbjct: 118 LIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHI 161
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYG 148
+ T EY +PE++ G G D W+ +FEL G
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTP----FRG 154
GT ++APE+V G+ + VD W+ + + G P FRG
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 278
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYG 148
+ T EY +PE++ G G D W+ +FEL G
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDH-ELTLANIVARALEFPKE 174
++ APE ++ D W+ GI L E+ YG P+ G+ + E+ A + R P+
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA--LERGYRMPRP 234
Query: 175 PAVPATAKDLISQLLAKDPERR 196
P +++ + PE R
Sbjct: 235 ENCPEELYNIMMRCWKNRPEER 256
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP N+LV + + + DF ++
Sbjct: 180 VIHRDLKPSNLLVNENCELKIGDFGMA 206
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDH-ELTLANIVARALEFPKE 174
++ APE ++ D W+ GI L E+ YG P+ G+ + E+ A + R P+
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA--LERGYRMPRP 407
Query: 175 PAVPATAKDLISQLLAKDPERR 196
P +++ + PE R
Sbjct: 408 ENCPEELYNIMMRCWKNRPEER 429
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFEL-FYGVTPFRGVD 156
++ APE ++ D W G+ L+E+ YG++P+ G+D
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 218
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTP----FRG 154
GT ++APE+V G+ + VD W+ + + G P FRG
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 262
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFEL-FYGVTPFRGVD 156
++ APE ++ D W G+ L+E+ YG++P+ G+D
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 219
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 202 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 241
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
+++RDLKP N+LV + + + DF ++
Sbjct: 179 VIHRDLKPSNLLVNENCELKIGDFGMA 205
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTP----FRG 154
GT ++APE+V G+ + VD W+ + + G P FRG
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 276
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
I +RD+K +NVL++++ + DF L+LK + S
Sbjct: 152 ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 210 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 249
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 206 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 245
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 209 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 248
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEP 175
+ APE + S D W+ GI ++E+ YG P+ + ++ + N + + P
Sbjct: 179 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-DVINAIEQDYRLPPPM 237
Query: 176 AVPATAKDLISQLLAKDPERR 196
P+ L+ KD R
Sbjct: 238 DCPSALHQLMLDCWQKDRNHR 258
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEY 57
V+RDL NVLV D ++DF L+ + + ++ P A+ + ++
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKF 363
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ L+E+F G +P+ GV
Sbjct: 258 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 297
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
I++RDLK N+ + D + + DF L+
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
I++RDLK N+ + D + + DF L+
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIV-ARALEFPKE 174
++ PE + + D W+ G+ L+E+F YG P+ + + + I R LE P+
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR- 260
Query: 175 PAVPATAKDLISQLLAKDPERR 196
A P ++ ++P++R
Sbjct: 261 -ACPPEVYAIMRGCWQREPQQR 281
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIV-ARALEFPKE 174
++ PE + + D W+ G+ L+E+F YG P+ + + + I R LE P+
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR- 254
Query: 175 PAVPATAKDLISQLLAKDPERR 196
A P ++ ++P++R
Sbjct: 255 -ACPPEVYAIMRGCWQREPQQR 275
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 4 IVYRDLKPENVLVRSDGHIMLTDFDLS 30
I++RDLK N+ + D + + DF L+
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLA 155
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ ++E+F G +P+ G+
Sbjct: 270 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 309
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIV-ARALEFPKE 174
++ PE + + D W+ G+ L+E+F YG P+ + + + I R LE P+
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR- 283
Query: 175 PAVPATAKDLISQLLAKDPERR 196
A P ++ ++P++R
Sbjct: 284 -ACPPEVYAIMRGCWQREPQQR 304
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEY 57
V+RDL NVLV D ++DF L+ + + ++ P A+ + ++
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKF 191
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
+++RDLKP N+L+ + + + DF L+ D + +++ E +++
Sbjct: 164 NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSK 223
Query: 63 PFTSASCIIP-NCIVPAVSCFRP 84
+T + I CI+ + RP
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNRP 246
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEY 57
V+RDL NVLV D ++DF L+ + + ++ P A+ + ++
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKF 176
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 146 NVLHRDLKPSNLLLNTTSDLKICDFGLARVAD 177
>pdb|1S9P|A Chain A, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With
Diethylstilbestrol
pdb|1S9P|B Chain B, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With
Diethylstilbestrol
pdb|1S9P|C Chain C, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With
Diethylstilbestrol
pdb|1S9P|D Chain D, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With
Diethylstilbestrol
Length = 227
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEY 57
+LG+VYR L E+ LV +D +IM D+ S + D N I L +Y
Sbjct: 79 ILGVVYRSLSFEDELVYADDYIM----------DEDQSKLAGLLDLNNAILQLVKKY 125
>pdb|1KV6|A Chain A, X-Ray Structure Of The Orphan Nuclear Receptor Err3
Ligand- Binding Domain In The Constitutively Active
Conformation
pdb|1KV6|B Chain B, X-Ray Structure Of The Orphan Nuclear Receptor Err3
Ligand- Binding Domain In The Constitutively Active
Conformation
pdb|2GP7|A Chain A, Estrogen Related Receptor-Gamma Ligand Binding Domain
pdb|2GP7|B Chain B, Estrogen Related Receptor-Gamma Ligand Binding Domain
pdb|2GP7|C Chain C, Estrogen Related Receptor-Gamma Ligand Binding Domain
pdb|2GP7|D Chain D, Estrogen Related Receptor-Gamma Ligand Binding Domain
pdb|2GPO|A Chain A, Estrogen Related Receptor-Gamma Ligand Binding Domain
Complexed With A Synthetic Peptide From Rip140
pdb|2GPP|A Chain A, Estrogen Related Receptor-Gamma Ligand Binding Domain
Complexed With A Rip140 Peptide And Synthetic Ligand
Gsk4716
pdb|2GPP|B Chain B, Estrogen Related Receptor-Gamma Ligand Binding Domain
Complexed With A Rip140 Peptide And Synthetic Ligand
Gsk4716
pdb|2GPU|A Chain A, Estrogen Related Receptor-gamma Ligand Binding Domain
Complexed With 4-hydroxy-tamoxifen
pdb|2GPV|A Chain A, Estrogen Related Receptor-gamma Ligand Binding Domain
Complexed With 4-hydroxy-tamoxifen And A Smrt Peptide
pdb|2GPV|B Chain B, Estrogen Related Receptor-gamma Ligand Binding Domain
Complexed With 4-hydroxy-tamoxifen And A Smrt Peptide
pdb|2GPV|C Chain C, Estrogen Related Receptor-gamma Ligand Binding Domain
Complexed With 4-hydroxy-tamoxifen And A Smrt Peptide
pdb|2GPV|D Chain D, Estrogen Related Receptor-gamma Ligand Binding Domain
Complexed With 4-hydroxy-tamoxifen And A Smrt Peptide
pdb|2GPV|E Chain E, Estrogen Related Receptor-gamma Ligand Binding Domain
Complexed With 4-hydroxy-tamoxifen And A Smrt Peptide
pdb|2GPV|F Chain F, Estrogen Related Receptor-gamma Ligand Binding Domain
Complexed With 4-hydroxy-tamoxifen And A Smrt Peptide
Length = 230
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEY 57
+LG+VYR L E+ LV +D +IM D+ S + D N I L +Y
Sbjct: 82 ILGVVYRSLSFEDELVYADDYIM----------DEDQSKLAGLLDLNNAILQLVKKY 128
>pdb|1VJB|A Chain A, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With 4-
Hydroxytamoxifen
pdb|1VJB|B Chain B, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With 4-
Hydroxytamoxifen
pdb|1TFC|A Chain A, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With A
Steroid Receptor Coactivator-1 Peptide
pdb|1TFC|B Chain B, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With A
Steroid Receptor Coactivator-1 Peptide
pdb|2P7A|A Chain A, Crystal Structure Of Estrogen Related Receptor G In
Complex With 3-Methyl Phenol
pdb|2P7G|A Chain A, X-Ray Structure Of Estrogen Related Receptor G In Complex
With Bisphenol A.
pdb|2P7Z|A Chain A, Estrogen Related Receptor Gamma In Complex With 4-Hydroxy-
Tamoxifen
Length = 251
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEY 57
+LG+VYR L E+ LV +D +IM D+ S + D N I L +Y
Sbjct: 103 ILGVVYRSLSFEDELVYADDYIM----------DEDQSKLAGLLDLNNAILQLVKKY 149
>pdb|1S9Q|A Chain A, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With
4-Hydroxytamoxifen
pdb|1S9Q|B Chain B, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With
4-Hydroxytamoxifen
Length = 251
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEY 57
+LG+VYR L E+ LV +D +IM D+ S + D N I L +Y
Sbjct: 103 ILGVVYRSLSFEDELVYADDYIM----------DEDQSKLAGLLDLNNAILQLVKKY 149
>pdb|2E2R|A Chain A, Crystal Structure Of Human Estrogen-Related Receptor Gamma
Ligand Binding Domain Complex With Bisphenol A
pdb|2ZAS|A Chain A, Crystal Structure Of Human Estrogen-Related Receptor Gamma
Ligand Binding Domain Complex With 4-Alpha-Cumylphenol,
A Bisphenol A Derivative
pdb|2ZBS|A Chain A, Crystal Structure Of Human Estrogen-Related Receptor Gamma
Ligand Binding Domain Apo Form
pdb|2ZKC|A Chain A, Crystal Structure Of Human Estrogen-Related Receptor Gamma
Ligand Binding Domain Complex With Bisphenol Z
Length = 244
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEY 57
+LG+VYR L E+ LV +D +IM D+ S + D N I L +Y
Sbjct: 95 ILGVVYRSLSFEDELVYADDYIM----------DEDQSKLAGLLDLNNAILQLVKKY 141
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ ++E+F G +P+ G+
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|2EWP|A Chain A, Crystal Structure Of Estrogen Related Receptor-3
(Err-Gamma) Ligand Binding Domaind With Tamoxifen Analog
Gsk5182
pdb|2EWP|B Chain B, Crystal Structure Of Estrogen Related Receptor-3
(Err-Gamma) Ligand Binding Domaind With Tamoxifen Analog
Gsk5182
pdb|2EWP|C Chain C, Crystal Structure Of Estrogen Related Receptor-3
(Err-Gamma) Ligand Binding Domaind With Tamoxifen Analog
Gsk5182
pdb|2EWP|D Chain D, Crystal Structure Of Estrogen Related Receptor-3
(Err-Gamma) Ligand Binding Domaind With Tamoxifen Analog
Gsk5182
pdb|2EWP|E Chain E, Crystal Structure Of Estrogen Related Receptor-3
(Err-Gamma) Ligand Binding Domaind With Tamoxifen Analog
Gsk5182
Length = 226
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEY 57
+LG+VYR L E+ LV +D +IM D+ S + D N I L +Y
Sbjct: 78 ILGVVYRSLSFEDELVYADDYIM----------DEDQSKLAGLLDLNNAILQLVKKY 124
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ ++E+F G +P+ G+
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|4AM6|A Chain A, C-terminal Domain Of Actin-related Protein Arp8 From S.
Cerevisiae
pdb|4AM6|B Chain B, C-terminal Domain Of Actin-related Protein Arp8 From S.
Cerevisiae
pdb|4AM7|A Chain A, Adp-bound C-terminal Domain Of Actin-related Protein Arp8
From S. Cerevisiae
pdb|4AM7|B Chain B, Adp-bound C-terminal Domain Of Actin-related Protein Arp8
From S. Cerevisiae
Length = 655
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFE---LFYGVTPFRGVDHELTL 161
V +E PEI+S + SP++W +F+ L+YG R VD + +
Sbjct: 128 VSFNENSKPEIISEKNDPSPIEW------IFDDSKLYYGSDALRCVDEKFVI 173
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ ++E+F G +P+ G+
Sbjct: 211 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 250
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ ++E+F G +P+ G+
Sbjct: 216 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 255
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ ++E+F G +P+ G+
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ ++E+F G +P+ G+
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ ++E+F G +P+ G+
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ ++E+F G +P+ G+
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ ++E+F G +P+ G+
Sbjct: 213 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 252
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ ++E+F G +P+ G+
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ ++E+F G +P+ G+
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ G+ ++E+F G +P+ G+
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 4 IVYRDLKPENVLVRSDGH-----IMLTDFDLSLKCDDSASNAQI 42
++YRD+KPEN L+ G+ I + DF L+ + D + I
Sbjct: 126 LIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHI 169
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Query: 4 IVYRDLKPENVLVRSDG-----HIMLTDFDLSLKCDDSASNAQI 42
++YRD+KPEN LV G I + DF L+ + D + I
Sbjct: 121 LIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHI 164
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKIXDFGLARVAD 175
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 8/30 (26%)
Query: 2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSL 31
+G+VY DLKPEN IMLT+ L L
Sbjct: 201 IGLVYNDLKPEN--------IMLTEEQLKL 222
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGV 155
+++APE + + D W+ GI L+E+F GV P+ G+
Sbjct: 239 KWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 27.7 bits (60), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 148 NVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 179
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 27.7 bits (60), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 164 NVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 195
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 148 NVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 179
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 175
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 175
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 4 IVYRDLKPENVLVRSDGH-----IMLTDFDLSLKCDDSASNAQI 42
++YRD+KPEN L+ G+ I + DF L+ + D + I
Sbjct: 126 LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHI 169
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 4 IVYRDLKPENVLVRSDGH-----IMLTDFDLSLKCDDSASNAQI 42
++YRD+KPEN L+ G+ I + DF L+ + D + I
Sbjct: 147 LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHI 190
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 146 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 177
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 144 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 175
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 149 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 180
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 164 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 195
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 27.3 bits (59), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 149 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 180
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 27.3 bits (59), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 150 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 181
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 27.3 bits (59), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 141 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 172
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 27.3 bits (59), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 27.3 bits (59), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 146 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 177
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 27.3 bits (59), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 142 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 173
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 142 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 173
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 27.3 bits (59), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 152 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 183
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 27.3 bits (59), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
+++RDLKP N+L+ + + + DF L+ D
Sbjct: 144 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 175
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,351,883
Number of Sequences: 62578
Number of extensions: 356092
Number of successful extensions: 2872
Number of sequences better than 100.0: 894
Number of HSP's better than 100.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 198
Number of HSP's that attempted gapping in prelim test: 1064
Number of HSP's gapped (non-prelim): 1700
length of query: 250
length of database: 14,973,337
effective HSP length: 96
effective length of query: 154
effective length of database: 8,965,849
effective search space: 1380740746
effective search space used: 1380740746
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)