Your job contains 1 sequence.
>025603
MKKPNNATAGSSKTKFKEESEEDNKTTSVTSSEEEEEIERELAEITFEDLLKARSDGSHL
VYRKNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDVEGFR
KRYDFLFENTLPAEKEELKKQLKKTNDPNAVDKLKKRISWIDKQLRFESTKSTDAAILAE
HKKKEREAAKHGKRPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKYM
PYRRPNNNDQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025603
(250 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2195082 - symbol:AT1G12650 "AT1G12650" species... 532 3.1e-51 1
ZFIN|ZDB-GENE-030131-9751 - symbol:rrp36 "ribosomal RNA p... 246 6.3e-21 1
DICTYBASE|DDB_G0278751 - symbol:DDB_G0278751 "UPF0399 fam... 237 5.7e-20 1
RGD|2321693 - symbol:Rrp36 "ribosomal RNA processing 36 h... 236 7.2e-20 1
MGI|MGI:2385053 - symbol:Rrp36 "ribosomal RNA processing ... 235 9.2e-20 1
UNIPROTKB|Q96EU6 - symbol:RRP36 "Ribosomal RNA processing... 230 3.1e-19 1
UNIPROTKB|A5GFR5 - symbol:RRP36 "Novel protein similar to... 230 3.1e-19 1
UNIPROTKB|E1BSD7 - symbol:LOC100858699 "Uncharacterized p... 233 1.1e-18 1
UNIPROTKB|A6QNR1 - symbol:RRP36 "Ribosomal RNA processing... 224 1.4e-18 1
UNIPROTKB|Q58D25 - symbol:KLHDC3 "Kelch domain-containing... 224 1.0e-17 1
UNIPROTKB|E2RCI2 - symbol:KLHDC3 "Uncharacterized protein... 223 1.3e-17 1
UNIPROTKB|A4R1G4 - symbol:RRP36 "rRNA biogenesis protein ... 213 2.0e-17 1
FB|FBgn0038235 - symbol:CG8461 species:7227 "Drosophila m... 170 7.1e-13 1
POMBASE|SPAC823.04 - symbol:SPAC823.04 "rRNA processing p... 165 3.0e-12 1
ASPGD|ASPL0000005620 - symbol:AN6561 species:162425 "Emer... 168 4.3e-12 1
WB|WBGene00020705 - symbol:T22H9.1 species:6239 "Caenorha... 160 5.9e-11 1
UNIPROTKB|E2RCI7 - symbol:KLHDC3 "Uncharacterized protein... 133 5.9e-09 1
CGD|CAL0000762 - symbol:orf19.2362 species:5476 "Candida ... 134 1.8e-07 1
UNIPROTKB|Q59SN0 - symbol:RRP36 "rRNA biogenesis protein ... 134 1.8e-07 1
SGD|S000005813 - symbol:RRP36 "Component of 90S preriboso... 110 0.00033 1
>TAIR|locus:2195082 [details] [associations]
symbol:AT1G12650 "AT1G12650" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0051604 "protein maturation" evidence=RCA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006364
KO:K14795 InterPro:IPR009292 PANTHER:PTHR21738 Pfam:PF06102
eggNOG:NOG265749 HOGENOM:HOG000243254 EMBL:AF446361 EMBL:AY101527
IPI:IPI00540029 RefSeq:NP_001031031.1 RefSeq:NP_001077524.1
RefSeq:NP_001077525.1 RefSeq:NP_172725.2 UniGene:At.28455
IntAct:Q8W1E4 PaxDb:Q8W1E4 PRIDE:Q8W1E4 EnsemblPlants:AT1G12650.1
EnsemblPlants:AT1G12650.2 EnsemblPlants:AT1G12650.3
EnsemblPlants:AT1G12650.4 GeneID:837821 KEGG:ath:AT1G12650
TAIR:At1g12650 InParanoid:Q8W1E4 OMA:SKIVFED PhylomeDB:Q8W1E4
ProtClustDB:CLSN2690399 Genevestigator:Q8W1E4 Uniprot:Q8W1E4
Length = 248
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 107/199 (53%), Positives = 137/199 (68%)
Query: 49 DLLKARSDGSHLVYRKNSQEKKAGRA--NKNRPMEVSAKKPVSRFREVVQAPKRVVRDPR 106
++ K R+DGS V K +Q KK GRA NKNRPMEVS+KKPVSR+REVV PK+ VRDPR
Sbjct: 47 EIHKLRADGSKAVPWKPNQVKKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPR 106
Query: 107 FESLCGNLDVEGFRKRYDFLFENTLPAXXXXXXXXXXXTNDPNAVDKLKKRISWIDKQLR 166
F L G LDVEGFRKRY+F FE+ LP T +P +D+LK ++++++K L+
Sbjct: 107 FNQLGGTLDVEGFRKRYNFFFEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVEKMLK 166
Query: 167 FE-STKSTDAAILXXXXXXXXXXXXXXXXPFYLKNSEIRKQRLIEKYNKLKGSGKVESFI 225
+E ST++ AAIL P+YLK SEIRKQ LIEKYN LK SGK+ S++
Sbjct: 167 YEPSTQNKGAAILTEHKKKEREAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKLTSYL 226
Query: 226 EKRRRKNAAKDHKYMPYRR 244
+KRR+KNA KDH++MPYRR
Sbjct: 227 DKRRKKNATKDHRFMPYRR 245
>ZFIN|ZDB-GENE-030131-9751 [details] [associations]
symbol:rrp36 "ribosomal RNA processing 36 homolog
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA]
ZFIN:ZDB-GENE-030131-9751 GO:GO:0005634 GO:GO:0006364 CTD:88745
HOVERGEN:HBG081113 KO:K14795 InterPro:IPR009292 PANTHER:PTHR21738
Pfam:PF06102 OMA:NRPREMS GeneTree:ENSGT00530000064271 EMBL:CR936460
IPI:IPI00488522 RefSeq:NP_001073413.1 UniGene:Dr.18286
Ensembl:ENSDART00000045682 GeneID:321183 KEGG:dre:321183
InParanoid:Q1L876 NextBio:20807270 Uniprot:Q1L876
Length = 320
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 60/185 (32%), Positives = 90/185 (48%)
Query: 60 LVYRKNSQEKK---AGRANKNRPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDV 116
+ Y Q+KK R NK+RP E+S+K+ V R+VV K + RDPRF+ L G
Sbjct: 131 IAYGDTKQKKKNEPMKRLNKHRPQEISSKQRVPFLRKVVPVKKMISRDPRFDDLSGEYKP 190
Query: 117 EGFRKRYDFLFENTLPAXXXXXXXXXXXTNDPNAVDKLKKRISWIDKQLRFESTKSTDAA 176
E F + Y F+ +N T ++LK + +D Q R + +
Sbjct: 191 EIFNQTYKFI-KNIQEKEAQEVRKQLKKTKSKAKQEELKALLRRMDNQQRARQRQEQERE 249
Query: 177 ILXXXXXXXXXXXXXXXXPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKD 236
PFYLK S+ +K L EKY++LK SGK+E+F+ K+R++NA KD
Sbjct: 250 KELEFKRKQRELVGQGHKPFYLKKSDKKKLELAEKYSELKKSGKLENFLSKKRKRNATKD 309
Query: 237 HKYMP 241
+ +P
Sbjct: 310 RRKLP 314
>DICTYBASE|DDB_G0278751 [details] [associations]
symbol:DDB_G0278751 "UPF0399 family protein"
species:44689 "Dictyostelium discoideum" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] dictyBase:DDB_G0278751 GO:GO:0005730
EMBL:AAFI02000024 GO:GO:0006364 KO:K14795 InterPro:IPR009292
PANTHER:PTHR21738 Pfam:PF06102 eggNOG:NOG265749 RefSeq:XP_641913.1
EnsemblProtists:DDB0206170 GeneID:8621674 KEGG:ddi:DDB_G0278751
OMA:ERMESTW ProtClustDB:CLSZ2497232 Uniprot:Q54XT8
Length = 298
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 59/189 (31%), Positives = 97/189 (51%)
Query: 65 NSQEK-KAGRANKNRPMEVSAKKPVSRFREVV-QAPKRVVRDPRFESLCGNLDVEG-FRK 121
NS+ K K R + + P+E++A KPVSRFR+VV K VRDPRF+SL G E +RK
Sbjct: 110 NSKNKYKIKRESSDAPVEMTAMKPVSRFRQVVVNKTKMNVRDPRFDSLSGGKYNEDLYRK 169
Query: 122 RYDFLFENTLPAXXXXXXXXXXXTNDPNAVDKLKKRISWIDKQLRFESTKSTDAAILXXX 181
RY FL ++ + +D D+L K+I QL+ + K
Sbjct: 170 RYGFL-DDVIKRDVERMESTWKQMDDCRERDQLYKKIQSKKSQLKTQQLKDQKRETKNKL 228
Query: 182 XXXXXXXXXXXXXPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKYMP 241
P+++ N +++ L EK+ +LK S K++ F+E +R++ ++K+ ++P
Sbjct: 229 WSNEIESVKKGKTPYHISNKTVKQFELQEKFKQLKASNKLDKFMETKRKRISSKEKTFLP 288
Query: 242 YRRPNNNDQ 250
RR + D+
Sbjct: 289 QRRSFDQDE 297
>RGD|2321693 [details] [associations]
symbol:Rrp36 "ribosomal RNA processing 36 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA;ISO] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IEA;ISO] RGD:2321693 GO:GO:0005730 GO:GO:0006364
GO:GO:0042274 OrthoDB:EOG4K0QNG InterPro:IPR009292
PANTHER:PTHR21738 Pfam:PF06102 OMA:NRPREMS
GeneTree:ENSGT00530000064271 IPI:IPI00373748
Ensembl:ENSRNOT00000024010 UCSC:RGD:2321693 Uniprot:D3ZDJ5
Length = 244
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 57/180 (31%), Positives = 92/180 (51%)
Query: 63 RKNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDVEGFRKR 122
+ S + A ++K+RP+E+SAK PV R+VV K+V RDPRF+ L G + E F K
Sbjct: 63 KTQSPRQPACVSDKHRPLEMSAKVPVPFLRQVVPISKKVARDPRFDDLSGEYNPEVFDKT 122
Query: 123 YDFLFENTLPAXXXXXXXXXXXTNDPNAV-DKLKKRISWIDKQLRFESTKSTDAAILXXX 181
Y FL N + A + +KL++ + +++Q + + +
Sbjct: 123 YQFL--NDIRAKEKQLVKRQLKKHRSGEKHEKLQQLLQRMEQQEMAQQERKQQQELRLAL 180
Query: 182 XXXXXXXXXXXXXPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKYMP 241
P++LK SE R+ L EK+ LK S K+ESF+ ++RR+NA KD +++P
Sbjct: 181 KQERRALAQQGHRPYFLKKSEQRQLALAEKFKDLKRSKKLESFLSRKRRRNAGKDRRHLP 240
>MGI|MGI:2385053 [details] [associations]
symbol:Rrp36 "ribosomal RNA processing 36 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=ISO] MGI:MGI:2385053 GO:GO:0005730 GO:GO:0006364
GO:GO:0042274 OrthoDB:EOG4K0QNG CTD:88745 HOVERGEN:HBG081113
KO:K14795 InterPro:IPR009292 PANTHER:PTHR21738 Pfam:PF06102
eggNOG:NOG265749 EMBL:AK148237 EMBL:BC011248 IPI:IPI00128482
RefSeq:NP_659106.1 UniGene:Mm.45101 STRING:Q3UFY0
PhosphoSite:Q3UFY0 PRIDE:Q3UFY0 Ensembl:ENSMUST00000024766
GeneID:224823 KEGG:mmu:224823 UCSC:uc008ctu.1
GeneTree:ENSGT00530000064271 InParanoid:Q3UFY0 NextBio:377393
Bgee:Q3UFY0 CleanEx:MM_BC011248 Genevestigator:Q3UFY0
GermOnline:ENSMUSG00000023971 Uniprot:Q3UFY0
Length = 244
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 57/180 (31%), Positives = 93/180 (51%)
Query: 63 RKNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDVEGFRKR 122
R S ++ A+K+RP+E+SAK V R+VV K+V RDPRF+ L G+ + E F K
Sbjct: 63 RTRSPQQPVCVADKHRPLEMSAKVRVPFLRQVVPISKKVARDPRFDDLSGDYNPEVFDKT 122
Query: 123 YDFLFENTLPAXXXXXXXXXXXTNDPNAV-DKLKKRISWIDKQLRFESTKSTDAAILXXX 181
Y FL N + A + DKL++ + +++Q + + +
Sbjct: 123 YQFL--NDIRAKEKQLVKKQLKRHRSGEERDKLQQLLQRMEQQEMAQQERKQQQELRLAL 180
Query: 182 XXXXXXXXXXXXXPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKYMP 241
P++LK SE R+ L EK+ +L+ S K+ESF+ ++RR+NA KD +++P
Sbjct: 181 KQERRAQAQQGHRPYFLKKSEQRQLALAEKFKELRRSKKLESFLSRKRRRNAGKDRRHLP 240
>UNIPROTKB|Q96EU6 [details] [associations]
symbol:RRP36 "Ribosomal RNA processing protein 36 homolog"
species:9606 "Homo sapiens" [GO:0005730 "nucleolus" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IDA] [GO:0042274 "ribosomal
small subunit biogenesis" evidence=IDA] GO:GO:0005730 EMBL:AL136304
GO:GO:0006364 GO:GO:0042274 OrthoDB:EOG4K0QNG CTD:88745
HOVERGEN:HBG081113 KO:K14795 InterPro:IPR009292 PANTHER:PTHR21738
Pfam:PF06102 eggNOG:NOG265749 EMBL:BC006293 EMBL:BC011933
EMBL:AF161371 IPI:IPI00106638 IPI:IPI00787473 RefSeq:NP_149103.1
UniGene:Hs.309231 ProteinModelPortal:Q96EU6 STRING:Q96EU6
PhosphoSite:Q96EU6 DMDM:74751848 PaxDb:Q96EU6 PRIDE:Q96EU6
Ensembl:ENST00000244496 GeneID:88745 KEGG:hsa:88745 UCSC:uc003otp.1
GeneCards:GC06P042995 HGNC:HGNC:21374 HPA:HPA029904 MIM:613475
neXtProt:NX_Q96EU6 PharmGKB:PA165618219 InParanoid:Q96EU6
OMA:NRPREMS GenomeRNAi:88745 NextBio:76220 Bgee:Q96EU6
CleanEx:HS_C6orf153 Genevestigator:Q96EU6
GermOnline:ENSG00000124541 Uniprot:Q96EU6
Length = 259
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 63/206 (30%), Positives = 104/206 (50%)
Query: 49 DLLKARSDGSHLVYRK----NSQEKKAGR--------ANKNRPMEVSAKKPVSRFREVVQ 96
+LL+ +S Y++ NS +K+A R A+K+RP+E+SAK V R+VV
Sbjct: 52 ELLELQSQVGTKTYKQLVAGNSPKKQASRPPIQNACVADKHRPLEMSAKIRVPFLRQVVP 111
Query: 97 APKRVVRDPRFESLCGNLDVEGFRKRYDFLFENTLPAXXXXXXXXXXXTN-DPNAVDKLK 155
K+V RDPRF+ L G + E F K Y FL N + A + +KL+
Sbjct: 112 ISKKVARDPRFDDLSGEYNPEVFDKTYQFL--NDIRAKEKELVKKQLKKHLSGEEHEKLQ 169
Query: 156 KRISWIDKQLRFESTKSTDAAILXXXXXXXXXXXXXXXXPFYLKNSEIRKQRLIEKYNKL 215
+ + +++Q + + + P++LK SE R+ L EK+ +L
Sbjct: 170 QLLQRMEQQEMAQQERKQQQELHLALKQERRAQAQQGHRPYFLKKSEQRQLALAEKFKEL 229
Query: 216 KGSGKVESFIEKRRRKNAAKDHKYMP 241
K S K+E+F+ ++RR+NA KD +++P
Sbjct: 230 KRSKKLENFLSRKRRRNAGKDRRHLP 255
>UNIPROTKB|A5GFR5 [details] [associations]
symbol:RRP36 "Novel protein similar to vertebrate
chromosome 6 open reading frame 153 (C6orf153)" species:9823 "Sus
scrofa" [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] GO:GO:0005730 GO:GO:0006364
GO:GO:0042274 EMBL:CR956379 HOVERGEN:HBG081113 KO:K14795
InterPro:IPR009292 PANTHER:PTHR21738 Pfam:PF06102 OMA:NRPREMS
GeneTree:ENSGT00530000064271 RefSeq:NP_001116562.1
UniGene:Ssc.17083 STRING:A5GFR5 Ensembl:ENSSSCT00000001846
GeneID:100141407 KEGG:ssc:100141407 CTD:100141407
HOGENOM:HOG000243254 ArrayExpress:A5GFR5 Uniprot:A5GFR5
Length = 246
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 57/174 (32%), Positives = 90/174 (51%)
Query: 69 KKAGRANKNRPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDVEGFRKRYDFLFE 128
+KA A+K+RP+E+SAK V R+VV K+V RDPRF+ L G + E F K Y FL
Sbjct: 71 QKACVADKHRPLEMSAKVRVPFLRQVVPISKKVARDPRFDDLSGEYNPEVFDKTYQFL-- 128
Query: 129 NTLPAXXXXXXXXXXXTNDPNAV-DKLKKRISWIDKQLRFESTKSTDAAILXXXXXXXXX 187
N + A +KL++ + +++Q + + +
Sbjct: 129 NDIRAREKELVKKQLKKRRSGEEHEKLQQLLQRMEQQDMAQQERKRQQELRLALKQERRA 188
Query: 188 XXXXXXXPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKYMP 241
P++LK SE R+ L EK+ +LK S K+ESF+ ++RR+NA KD +++P
Sbjct: 189 QAQQGHRPYFLKKSEQRQLVLAEKFKELKRSKKLESFLSRKRRRNAGKDRRHLP 242
>UNIPROTKB|E1BSD7 [details] [associations]
symbol:LOC100858699 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR011498 InterPro:IPR015915
Pfam:PF07646 GO:GO:0005737 GO:GO:0003682 GO:GO:0000790
Gene3D:2.120.10.80 GeneTree:ENSGT00700000104278 InterPro:IPR009292
Pfam:PF06102 OMA:LIDDIVY EMBL:AADN02044230 EMBL:AADN02044231
IPI:IPI00600215 Ensembl:ENSGALT00000013911 Uniprot:E1BSD7
Length = 551
Score = 233 (87.1 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 56/167 (33%), Positives = 86/167 (51%)
Query: 78 RPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDVEGFRKRYDFLFENTLPAXXXX 137
RP+E+SAKKP+ R+VV K+V RDPRF+ L G + E F K Y FL +
Sbjct: 384 RPVEMSAKKPMPFLRQVVPVTKKVHRDPRFDDLSGEYNPEIFMKTYSFL-DTIKKQEKEM 442
Query: 138 XXXXXXXTNDPNAVDKLKKRISWIDKQLRFESTKSTDAAILXXXXXXXXXXXXXXXXPFY 197
+ +KL++ ++ + +Q + + + PF+
Sbjct: 443 VQKQLKKCRNVEQKEKLQQLLNRMTQQEQAQKKQQKRRERELTLKRQQRELAKQGKKPFF 502
Query: 198 LKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKYMPYRR 244
LK SE RK L EKY +LK SGK+ESF+ K+R++NA KD + +P ++
Sbjct: 503 LKKSEKRKLELAEKYAELKRSGKLESFLNKKRKRNAVKDKRRLPSQK 549
>UNIPROTKB|A6QNR1 [details] [associations]
symbol:RRP36 "Ribosomal RNA processing protein 36 homolog"
species:9913 "Bos taurus" [GO:0042274 "ribosomal small subunit
biogenesis" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] GO:GO:0005730
GO:GO:0006364 GO:GO:0042274 GeneTree:ENSGT00700000104278
EMBL:BC148959 IPI:IPI00842054 RefSeq:NP_001098949.1
UniGene:Bt.101030 STRING:A6QNR1 Ensembl:ENSBTAT00000047039
GeneID:100125879 KEGG:bta:100125879 CTD:88745 HOVERGEN:HBG081113
KO:K14795 NextBio:20788862 ArrayExpress:A6QNR1 InterPro:IPR009292
PANTHER:PTHR21738 Pfam:PF06102 Uniprot:A6QNR1
Length = 246
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 53/168 (31%), Positives = 85/168 (50%)
Query: 74 ANKNRPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDVEGFRKRYDFLFENTLPA 133
A+K+RP+E+SAK V R+VV K+V RDPRF+ L G + E F K Y FL ++
Sbjct: 76 ADKHRPLEMSAKVRVPFLRQVVPISKKVARDPRFDDLSGEYNPEVFDKTYQFL-DDIRAR 134
Query: 134 XXXXXXXXXXXTNDPNAVDKLKKRISWIDKQLRFESTKSTDAAILXXXXXXXXXXXXXXX 193
+KL+ + +++Q + + +
Sbjct: 135 EKELVKKQLKKHRSGEEHEKLQHLLQRMEQQEMAQKERKRQQELRLALKQERRAQAQQGH 194
Query: 194 XPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKYMP 241
P++LK SE R+ L EK+ +LK S K+ESF+ ++RR+NA KD +++P
Sbjct: 195 RPYFLKKSEQRQLVLAEKFKELKRSKKLESFLSRKRRRNAGKDRRHLP 242
>UNIPROTKB|Q58D25 [details] [associations]
symbol:KLHDC3 "Kelch domain-containing protein 3"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] InterPro:IPR011498 InterPro:IPR015915
Pfam:PF07646 GO:GO:0005737 GO:GO:0003682 GO:GO:0000790
Gene3D:2.120.10.80 GeneTree:ENSGT00700000104278
HOGENOM:HOG000276538 HOVERGEN:HBG071311 OrthoDB:EOG4K0QNG
InterPro:IPR009292 Pfam:PF06102 EMBL:DAAA02055080 EMBL:BT021772
IPI:IPI00712059 STRING:Q58D25 Ensembl:ENSBTAT00000016944
InParanoid:Q58D25 Uniprot:Q58D25
Length = 550
Score = 224 (83.9 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 53/168 (31%), Positives = 85/168 (50%)
Query: 74 ANKNRPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDVEGFRKRYDFLFENTLPA 133
A+K+RP+E+SAK V R+VV K+V RDPRF+ L G + E F K Y FL ++
Sbjct: 380 ADKHRPLEMSAKVRVPFLRQVVPISKKVARDPRFDDLSGEYNPEVFDKTYQFL-DDIRAR 438
Query: 134 XXXXXXXXXXXTNDPNAVDKLKKRISWIDKQLRFESTKSTDAAILXXXXXXXXXXXXXXX 193
+KL+ + +++Q + + +
Sbjct: 439 EKELVKKQLKKHRSGEEHEKLQHLLQRMEQQEMAQKERKRQQELRLALKQERRAQAQQGH 498
Query: 194 XPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKYMP 241
P++LK SE R+ L EK+ +LK S K+ESF+ ++RR+NA KD +++P
Sbjct: 499 RPYFLKKSEQRQLVLAEKFKELKRSKKLESFLSRKRRRNAGKDRRHLP 546
>UNIPROTKB|E2RCI2 [details] [associations]
symbol:KLHDC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] InterPro:IPR011498 InterPro:IPR015915 Pfam:PF07646
GO:GO:0005737 GO:GO:0003682 GO:GO:0000790 Gene3D:2.120.10.80
GeneTree:ENSGT00700000104278 InterPro:IPR009292 Pfam:PF06102
EMBL:AAEX03008332 Ensembl:ENSCAFT00000002776 OMA:LIDDIVY
Uniprot:E2RCI2
Length = 553
Score = 223 (83.6 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 62/209 (29%), Positives = 104/209 (49%)
Query: 49 DLLKARSDGSHLVYRK----NSQEKKAGR--------ANKNRPMEVSAKKPVSRFREVVQ 96
+LL+ +S Y++ NS +K+ R A+K+RP+E+SAK V R+VV
Sbjct: 343 ELLELQSQVGTKTYKRLVAGNSSKKEGSRPRVQNACVADKHRPLEMSAKVRVPFLRQVVP 402
Query: 97 APKRVVRDPRFESLCGNLDVEGFRKRYDFLFENTLPAXXXXXXXXXXXT----NDPNAVD 152
K+V RDPRF+ L G + E F K Y+FL N + A + +
Sbjct: 403 ISKKVARDPRFDDLSGEYNPEVFDKTYEFL--NDIRAKEKENVELVKKQLKKHHSGQEHE 460
Query: 153 KLKKRISWIDKQLRFESTKSTDAAILXXXXXXXXXXXXXXXXPFYLKNSEIRKQRLIEKY 212
KL++ + +++Q + + + P++LK SE R+ L EK+
Sbjct: 461 KLQQLLQRMEQQEMAQQERRRQQELRLALKQEQRARAQQGHRPYFLKKSEQRQLVLAEKF 520
Query: 213 NKLKGSGKVESFIEKRRRKNAAKDHKYMP 241
+LK S ++ESF+ ++RR+NA KD +++P
Sbjct: 521 KELKRSKRLESFLSRKRRRNAGKDRRHLP 549
>UNIPROTKB|A4R1G4 [details] [associations]
symbol:RRP36 "rRNA biogenesis protein RRP36" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] GO:GO:0005730 GO:GO:0030529 EMBL:CM001231
GO:GO:0006364 KO:K14795 InterPro:IPR009292 PANTHER:PTHR21738
Pfam:PF06102 eggNOG:NOG265749 OrthoDB:EOG4STWF3
RefSeq:XP_003709678.1 STRING:A4R1G4 EnsemblFungi:MGG_06938T0
GeneID:2685111 KEGG:mgr:MGG_06938 Uniprot:A4R1G4
Length = 316
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 61/199 (30%), Positives = 94/199 (47%)
Query: 52 KARSDGSHLVYRKNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPKRV---VRDPRFE 108
+AR + V + + GR K+ P E+S+K+PVSR+REVV+ P RD RFE
Sbjct: 117 EARQGNAKTVSKAAASASAPGRKTKSAPEEMSSKRPVSRYREVVKPPPNARPKPRDVRFE 176
Query: 109 SLCGNLDVEGFRKRYDFL--FENTLPAXXXXXXXXXXXTNDPNAVD-KLKKRISWIDKQL 165
D + FR+ Y FL + N A + D KLK R ++ +
Sbjct: 177 QELTGEDYQRFRRNYAFLDEYRNDEMAKLREIIARKKGVTPADREDAKLKLRK--MEDEK 234
Query: 166 RFESTKSTDAAILXXXXXXXXXXXXXXXXPFYLKNSEIRKQRLIEKYNKLKGSGKVESFI 225
R + K + ++ PF+LK SE +K L++KY + G+V+ I
Sbjct: 235 RSQDRKDREHELMREHKKKEKELVKQGKKPFFLKKSEQKKLLLMDKYAGMS-KGQVDKAI 293
Query: 226 EKRRRKNAAKDHKYMPYRR 244
EK+R+K A K+ K +P+ R
Sbjct: 294 EKKRKKVAGKEKKQLPFAR 312
>FB|FBgn0038235 [details] [associations]
symbol:CG8461 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] EMBL:AE014297
GO:GO:0005634 GO:GO:0022008 GO:GO:0006364 KO:K14795
InterPro:IPR009292 PANTHER:PTHR21738 Pfam:PF06102 eggNOG:NOG265749
OMA:NRPREMS GeneTree:ENSGT00530000064271 EMBL:AY061371
RefSeq:NP_650367.1 UniGene:Dm.1196 IntAct:Q9VFJ1 MINT:MINT-1627285
EnsemblMetazoa:FBtr0082986 GeneID:41758 KEGG:dme:Dmel_CG8461
UCSC:CG8461-RA FlyBase:FBgn0038235 InParanoid:Q9VFJ1
OrthoDB:EOG4ZS7K8 GenomeRNAi:41758 NextBio:825428 Uniprot:Q9VFJ1
Length = 244
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 50/170 (29%), Positives = 73/170 (42%)
Query: 73 RANKNRPMEVSAKK--PVSRFREVVQAPKRV-VRDPRFESLCGNLDVEGFRKRYDFLFEN 129
R NKNRP E++ ++ P V+ K V +RDPRF+ G E F+K Y F+ +
Sbjct: 72 RLNKNRPREMTTRRQVPFLGAEHRVERKKNVELRDPRFDEKSGTYSAETFKKNYQFVSQ- 130
Query: 130 TLPAXXXXXXXXXXXTNDPNAVDKLKKRIS-WIDKQLRFESTKSTDAAILXXXXXXXXXX 188
D +K + I+K + + T L
Sbjct: 131 IRAKEVGQLKKKLDEVEDEAEKHHIKDTMQRLINKNVE-DKKWHTKQKQLKKERSAIQKK 189
Query: 189 XXXXXXPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHK 238
P YL E R + L+ ++ KLK +GK+ +EKRR+KNAAKD K
Sbjct: 190 HDLGQQPHYLTKKERRAKELVAQFEKLKNTGKLNKHMEKRRKKNAAKDRK 239
>POMBASE|SPAC823.04 [details] [associations]
symbol:SPAC823.04 "rRNA processing protein Rrp36, DUF947
family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000469 "cleavage involved in rRNA processing" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0030686
"90S preribosome" evidence=ISO] [GO:0042274 "ribosomal small
subunit biogenesis" evidence=ISO] EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0030686 GO:GO:0000462 GO:GO:0000469
InterPro:IPR009292 PANTHER:PTHR21738 Pfam:PF06102 eggNOG:NOG265749
OrthoDB:EOG4STWF3 RefSeq:NP_593831.3 STRING:Q9P6P2
EnsemblFungi:SPAC823.04.1 GeneID:2543403 NextBio:20804418
Uniprot:Q9P6P2
Length = 265
Score = 165 (63.1 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 48/192 (25%), Positives = 87/192 (45%)
Query: 64 KNSQEKKAGRANKNRPMEVSAKKPVSRFREV----VQAPKRVVRDPRFESLCGNLDVEGF 119
K Q+ K R N +V KK +++ R Q + + +F+SL GNL +
Sbjct: 75 KEQQKTKIDRKNMKHTEKVD-KKFLAKERNTPLKNCQVKNQFLVFAKFDSLSGNLSKDKV 133
Query: 120 RKRYDFLFENTLPAXXXXXXXXXXXTNDPNAVDKLKKRI-SWIDKQLRFESTKSTDAAIL 178
+K Y FL E + + D + +++ + S + K R + + ++
Sbjct: 134 KKNYGFLNEYRV-SEIQQLRDELKICKDQERAESIRQTLKSLLSKMERHLEEERAER-VM 191
Query: 179 XXXXXXXXXXXXXXXXPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHK 238
PFYLK +E +K ++KY ++G+ ++ +IEK+RR+ A K+ K
Sbjct: 192 HEFRAQEKERVKEGKKPFYLKRNEQKKLIQMDKYKSMEGTKALDKYIEKKRRRRAQKEKK 251
Query: 239 YMPYRRPNNNDQ 250
++P RP+ N Q
Sbjct: 252 HLPRARPSANSQ 263
>ASPGD|ASPL0000005620 [details] [associations]
symbol:AN6561 species:162425 "Emericella nidulans"
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000469 "cleavage involved in rRNA processing" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
GO:GO:0005730 EMBL:BN001301 GO:GO:0030529 EMBL:AACD01000109
GO:GO:0006364 KO:K14795 InterPro:IPR009292 PANTHER:PTHR21738
Pfam:PF06102 eggNOG:NOG265749 RefSeq:XP_664165.1 STRING:Q5AYR9
EnsemblFungi:CADANIAT00007335 GeneID:2870329 KEGG:ani:AN6561.2
HOGENOM:HOG000201208 OMA:MSYYFKN OrthoDB:EOG4STWF3 Uniprot:Q5AYR9
Length = 352
Score = 168 (64.2 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 52/187 (27%), Positives = 86/187 (45%)
Query: 64 KNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPK-RVVRDPRFE-SLCGNLDVEGFRK 121
K+ +K R +K+ P S+K VSR R +++ P RDPRF+ ++ G G
Sbjct: 149 KSRVDKPPPRTSKHAPTVQSSKYAVSRKRTIIEPPSVPKSRDPRFDPTIVGGRGGSGSSA 208
Query: 122 RYD-FLF-ENTLPAXXXXXXXXXXXTNDPNAVDKLKKRISWIDKQLRFESTKSTDAAILX 179
D + F ++ A T D + L++ I + +LR + IL
Sbjct: 209 PSDAYAFLDDYRAAELRALKEQLAKTKDVRRREALQREIRSMTDRLRTIENHKREKEILS 268
Query: 180 XXXXXXXXXXXXX--XXPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDH 237
P++LK S+I+KQ L++KY +K + ++ +E+RR+K AAK+
Sbjct: 269 EHKKREKQLIREGKKATPYFLKKSDIKKQALLKKYEGMKSKDRAKA-LERRRKKAAAKER 327
Query: 238 KYMPYRR 244
K MP R
Sbjct: 328 KEMPMER 334
>WB|WBGene00020705 [details] [associations]
symbol:T22H9.1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0000003
InterPro:IPR009292 PANTHER:PTHR21738 Pfam:PF06102 eggNOG:NOG265749
GeneTree:ENSGT00530000064271 EMBL:FO081740
ProteinModelPortal:Q8MNX1 PaxDb:Q8MNX1 EnsemblMetazoa:T22H9.1.1
EnsemblMetazoa:T22H9.1.2 UCSC:T22H9.1 WormBase:T22H9.1
HOGENOM:HOG000016328 InParanoid:Q8MNX1 OMA:EAPIFRT NextBio:901644
Uniprot:Q8MNX1
Length = 457
Score = 160 (61.4 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 46/190 (24%), Positives = 84/190 (44%)
Query: 63 RKNSQEKK--AGRANK--NRPMEVSAKKPVSRFREVV----QAPKRVVRDPRFESLCGNL 114
+K + EKK A +A+K +RP E+S+K+PVS FR + Q K+ DPRF++ G+
Sbjct: 261 KKRADEKKKAAEKADKGQHRPREMSSKRPVSAFRNIYGGHEQEKKKKKWDPRFDARAGDF 320
Query: 115 DVEGFRKRYDFLFENTLPAXXXXXXX--XXXXTNDPNAVDKLKKRISWIDKQLRFESTKS 172
F Y FL E D ++LK + ++ + + + K
Sbjct: 321 KEVCFENNYQFLDEIRTGEMQDLRNEYNTARAEGDEKKAERLKNTLHKMETREKTRAEKR 380
Query: 173 TDAAILXXXXXXXXXXXXXXXXPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKN 232
A P + +++R+ +KY +LK K++ +++++ +K
Sbjct: 381 RHAETRKELHDDNIERMLRGEAPIFRTKAQVRRIDAEKKYEELKKDNKLDKYLQRKAKKE 440
Query: 233 AAKDHKYMPY 242
+AK K P+
Sbjct: 441 SAKQKKARPF 450
>UNIPROTKB|E2RCI7 [details] [associations]
symbol:KLHDC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634 GO:GO:0006364
GeneTree:ENSGT00700000104278 InterPro:IPR009292 PANTHER:PTHR21738
Pfam:PF06102 EMBL:AAEX03008332 Ensembl:ENSCAFT00000002771
NextBio:20850844 Uniprot:E2RCI7
Length = 167
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 35/90 (38%), Positives = 51/90 (56%)
Query: 49 DLLKARSDGSHLVYRK----NSQEKKAGR--------ANKNRPMEVSAKKPVSRFREVVQ 96
+LL+ +S Y++ NS +K+ R A+K+RP+E+SAK V R+VV
Sbjct: 39 ELLELQSQVGTKTYKRLVAGNSSKKEGSRPRVQNACVADKHRPLEMSAKVRVPFLRQVVP 98
Query: 97 APKRVVRDPRFESLCGNLDVEGFRKRYDFL 126
K+V RDPRF+ L G + E F K Y+FL
Sbjct: 99 ISKKVARDPRFDDLSGEYNPEVFDKTYEFL 128
>CGD|CAL0000762 [details] [associations]
symbol:orf19.2362 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000469
"cleavage involved in rRNA processing" evidence=IEA] CGD:CAL0000762
GO:GO:0005730 GO:GO:0030529 GO:GO:0006364 KO:K14795
InterPro:IPR009292 PANTHER:PTHR21738 Pfam:PF06102 EMBL:AACQ01000150
EMBL:AACQ01000149 RefSeq:XP_712652.1 RefSeq:XP_712672.1
STRING:Q59SN0 GeneID:3645699 GeneID:3645730 KEGG:cal:CaO19.2362
KEGG:cal:CaO19.9898 eggNOG:NOG265749 Uniprot:Q59SN0
Length = 281
Score = 134 (52.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 48/192 (25%), Positives = 87/192 (45%)
Query: 64 KNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPKRVVR----DPRFESLCGNLDVEGF 119
K++++KK NK+ P E S+K+PVSR R++ P R + D RF++ G D+
Sbjct: 95 KDTKKKK----NKHAPSESSSKRPVSRIRDIPGLPSRKQQTLHTDIRFDAAYGKADLAKA 150
Query: 120 RKRYDFLFENTLPAXXXXXXXXXXXTNDPNAVDKLKKRISWIDKQLRFESTKSTDAA--I 177
RK Y FL E + N ++ + ++ + R ++ K+ D I
Sbjct: 151 RKDYAFLDEYRKQEIANMESLLKDKKSRLNDDEREEIKLQLQSLKSRMDTLKNRDLENNI 210
Query: 178 LXXXXXXXXXXXXXXXX--PFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAK 235
L P++LK S+ RK K++ +K + E +E++R+K K
Sbjct: 211 LSNYKKQQMESFKEGKVNKPYFLKRSDKRKILQKAKFDSMKPKQR-EKAMERKRKKRLGK 269
Query: 236 DHKYMPYRRPNN 247
+ + + ++ P N
Sbjct: 270 EFRQLEFK-PTN 280
>UNIPROTKB|Q59SN0 [details] [associations]
symbol:RRP36 "rRNA biogenesis protein RRP36" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] CGD:CAL0000762 GO:GO:0005730 GO:GO:0030529
GO:GO:0006364 KO:K14795 InterPro:IPR009292 PANTHER:PTHR21738
Pfam:PF06102 EMBL:AACQ01000150 EMBL:AACQ01000149 RefSeq:XP_712652.1
RefSeq:XP_712672.1 STRING:Q59SN0 GeneID:3645699 GeneID:3645730
KEGG:cal:CaO19.2362 KEGG:cal:CaO19.9898 eggNOG:NOG265749
Uniprot:Q59SN0
Length = 281
Score = 134 (52.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 48/192 (25%), Positives = 87/192 (45%)
Query: 64 KNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPKRVVR----DPRFESLCGNLDVEGF 119
K++++KK NK+ P E S+K+PVSR R++ P R + D RF++ G D+
Sbjct: 95 KDTKKKK----NKHAPSESSSKRPVSRIRDIPGLPSRKQQTLHTDIRFDAAYGKADLAKA 150
Query: 120 RKRYDFLFENTLPAXXXXXXXXXXXTNDPNAVDKLKKRISWIDKQLRFESTKSTDAA--I 177
RK Y FL E + N ++ + ++ + R ++ K+ D I
Sbjct: 151 RKDYAFLDEYRKQEIANMESLLKDKKSRLNDDEREEIKLQLQSLKSRMDTLKNRDLENNI 210
Query: 178 LXXXXXXXXXXXXXXXX--PFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAK 235
L P++LK S+ RK K++ +K + E +E++R+K K
Sbjct: 211 LSNYKKQQMESFKEGKVNKPYFLKRSDKRKILQKAKFDSMKPKQR-EKAMERKRKKRLGK 269
Query: 236 DHKYMPYRRPNN 247
+ + + ++ P N
Sbjct: 270 EFRQLEFK-PTN 280
>SGD|S000005813 [details] [associations]
symbol:RRP36 "Component of 90S preribosomes" species:4932
"Saccharomyces cerevisiae" [GO:0000469 "cleavage involved in rRNA
processing" evidence=IMP] [GO:0042274 "ribosomal small subunit
biogenesis" evidence=IMP] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] SGD:S000005813 GO:GO:0005730
EMBL:BK006948 GO:GO:0030686 EMBL:X89633 GO:GO:0000462 GO:GO:0000469
KO:K14795 InterPro:IPR009292 PANTHER:PTHR21738 Pfam:PF06102
eggNOG:NOG265749 OMA:MSYYFKN OrthoDB:EOG4STWF3
GeneTree:ENSGT00530000064271 EMBL:Z75195 PIR:S67189
RefSeq:NP_014930.1 ProteinModelPortal:Q12481 IntAct:Q12481
MINT:MINT-2491972 STRING:Q12481 EnsemblFungi:YOR287C GeneID:854461
KEGG:sce:YOR287C CYGD:YOR287c NextBio:976739 Genevestigator:Q12481
GermOnline:YOR287C Uniprot:Q12481
Length = 300
Score = 110 (43.8 bits), Expect = 0.00033, P = 0.00033
Identities = 46/186 (24%), Positives = 82/186 (44%)
Query: 68 EKKAGRANKNRPMEVSAKKPVSRFREV--VQAP--KR--VVRDPRFESLCGN-LDVEGFR 120
+K + +K+ P+E S+KK V R R + ++ P KR + +D RF+ G LD R
Sbjct: 115 QKVPKKKSKHAPVEQSSKKRVPRVRNIPGLEIPRNKRSNLYQDIRFDKSTGKALDSSIIR 174
Query: 121 KRYDFLFE---NTLPAXXXXXXXXXXXTN-DPNAVDKLKKRISWIDKQLRFESTKSTDAA 176
KRY FL E + + D +++++R+ + +L+ K +
Sbjct: 175 KRYQFLDEYREKEIDELQKLLQERKFLSKIDQGEREEMEQRLKSMKSRLQSMKNKDLERE 234
Query: 177 ILXXXXXXXXXXXXXXXXPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKD 236
IL ++LK SE RK K++ +K + E +E++R+K K+
Sbjct: 235 ILKEYENDMNKNNNTR---YHLKKSEKRKVVQKWKFDHMKAKQR-EKVMERKRKKRLGKE 290
Query: 237 HKYMPY 242
K +
Sbjct: 291 FKQFEF 296
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.129 0.364 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 250 195 0.00078 111 3 11 23 0.38 33
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 591 (63 KB)
Total size of DFA: 148 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.94u 0.13s 16.07t Elapsed: 00:00:01
Total cpu time: 15.94u 0.13s 16.07t Elapsed: 00:00:01
Start: Mon May 20 22:58:33 2013 End: Mon May 20 22:58:34 2013