BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025607
(250 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M2Z5|FBL53_ARATH F-box/LRR-repeat protein At3g48880 OS=Arabidopsis thaliana
GN=At3g48880 PE=2 SV=1
Length = 309
Score = 354 bits (908), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 167/241 (69%), Positives = 208/241 (86%), Gaps = 2/241 (0%)
Query: 4 SNYIKIPLEPYVYVHGHSDKQLTRILKISLSLSRGSIRTLIFHFNLYVSDDQLTYTAERC 63
S++IKIPLEPYVYV SD+ LTRILK+S++LS GS RTLIFHFNL++SDDQLTYTAERC
Sbjct: 64 SSFIKIPLEPYVYVERRSDEALTRILKLSMNLSGGSTRTLIFHFNLFLSDDQLTYTAERC 123
Query: 64 PQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMPSIANPPYLMEEIAQNCRNFRELKIM 123
P L+R+V+PAWNRIKKTGICKAIR+W+DLESLTMPSIANPPYL+ EIA+NC+NF+ELKIM
Sbjct: 124 PGLRRVVLPAWNRIKKTGICKAIRIWKDLESLTMPSIANPPYLLTEIAKNCKNFKELKIM 183
Query: 124 GPFDLLFASTLNMYLPKLKVLSLRCTTLNRDALILILDGLQNLEVLNISHCLLIDVP-LA 182
GPF++ FA+TL LP +K LS+RC+ + R+AL+ ILDGL +LEVLNISH L++
Sbjct: 184 GPFEVFFANTLITCLPNIKTLSIRCSAIKREALMKILDGLPSLEVLNISHSHLVEYSGWQ 243
Query: 183 PAPKKIIKKLDRTILQKAARLRKFLTCMED-SCIMCQRTKNDEGIMRWYKYEEGLWKDDE 241
P K I+++LD+TI++K ARL+KFLTCM+ +C+MCQRT+NDEGI+RWYKYEEG WK DE
Sbjct: 244 PQQKVIVRELDKTIMEKTARLKKFLTCMDHKTCVMCQRTENDEGIVRWYKYEEGDWKVDE 303
Query: 242 V 242
V
Sbjct: 304 V 304
>sp|Q9T0C6|FB230_ARATH Putative F-box protein At4g11580 OS=Arabidopsis thaliana
GN=At4g11580 PE=4 SV=1
Length = 333
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 35 LSRGSIRTLIFHFNLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLES 94
LSR + + L F+FN Y+ ++ L + AE+ P +++L +P W + + A W++L++
Sbjct: 128 LSRMAPKNLFFNFNSYIQENGLKFAAEKMPNIEKLALPIWCYQNEKSLRFAFSQWKNLKT 187
Query: 95 LTMPS--IANPPYLMEEIAQNCRNFRELKIMGPFDLLFASTLNMYLPKLKVLSLRCTTLN 152
L + + + + + ++C N LK +G + + + YL LK LSLRC ++
Sbjct: 188 LIIAHEHSFSGRFDFKAVGESCSNLTNLKYLGRLEEYTSREIVSYLHSLKRLSLRCFLVS 247
Query: 153 RDALILILDGLQNLEVLNISHCLLIDVPLAPAPKKIIKKLDRTILQKAA-RLRKFLTCME 211
A+ + GL NL +LN+SHC P I K +D ++ A +L KF+TC
Sbjct: 248 SIAVYRFITGLPNLTILNVSHCKNPYDYFLP----IAKSIDNYVITAATQKLEKFITCPH 303
Query: 212 DSCIMCQRTKNDEGIMRWYKYEEGLWKDDEV 242
D C++C+ + Y +W++DE+
Sbjct: 304 D-CMICK-----DRCRYSLSYLAEVWRNDEI 328
>sp|Q9S9V9|FBL23_ARATH Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana
GN=FBL23 PE=4 SV=1
Length = 449
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 50 YVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMPSIANPPYLMEE 109
Y ++D + Y A+R LK L + I G+ KA+ LE L + + +
Sbjct: 263 YGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGESLRD 322
Query: 110 IAQNCRNFRELKIMGPFDLLF--------ASTLNMYLPKLKVLSLRCTTLNRDALILILD 161
I ++C N + LK+ +++F A + +P+L+ L L L L ILD
Sbjct: 323 IGRSCPNLKTLKLNRAPEIMFSNSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILD 382
Query: 162 GLQNLEVLNISHCLLIDV 179
G +LE L++ C I++
Sbjct: 383 GCPHLEHLDLRQCFNINL 400
>sp|E6ZHJ8|FXL15_DICLA F-box/LRR-repeat protein 15 OS=Dicentrarchus labrax GN=fbxl15 PE=3
SV=1
Length = 292
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 25 LTRILKISLSLSRGSIRTLIFHFNLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICK 84
LTR +++SLS ++ L +V L A+ C L+ + + A ++K IC
Sbjct: 120 LTRHSLVAVSLSCMHLQHLGLAHCEWVDSLSLRSLADHCGGLQSIDLTACRQLKDDAICY 179
Query: 85 AIRMWRDLESLTMPSIAN-PPYLMEEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKL 141
+ L SL++ AN +EE+A+NCR +L + G + S TL Y PKL
Sbjct: 180 LAKKCLKLRSLSLAVNANITDESVEEVAKNCRGLEQLDLTGCLRVRNQSIRTLAEYCPKL 239
Query: 142 KVLSL-RCTTLNRDAL 156
+ L + C + +L
Sbjct: 240 QSLKVNHCHNVTESSL 255
>sp|Q6NW95|FXL15_DANRE F-box/LRR-repeat protein 15 OS=Danio rerio GN=fbxl15 PE=2 SV=2
Length = 296
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 24 QLTRILKISLSLSRGSIRTLIFHFNLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGIC 83
QL+R +++SLS ++ L +V L A+ CP L+ L + A ++K +C
Sbjct: 123 QLSRRALVAVSLSCPRLQHLSLAHCEWVDSLALRSLADHCPMLRSLDLTACRQLKDPAVC 182
Query: 84 KAIRMWRDLESLTMPSIAN-PPYLMEEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPK 140
+L +L++ AN +EE+A+ CR L + G + + TL Y PK
Sbjct: 183 YLAGKCPELRALSVAVNANITDTAVEEVAKKCREMERLDLTGCLRVRNEAIRTLAEYCPK 242
Query: 141 LKVLSL 146
L+ L +
Sbjct: 243 LQSLKV 248
>sp|B5X441|FXL15_SALSA F-box/LRR-repeat protein 15 OS=Salmo salar GN=fbxl15 PE=2 SV=1
Length = 292
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 24 QLTRILKISLSLSRGSIRTLIFHFNLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGIC 83
+LTR +++SLS ++ L +V + A+ C L+ + + A ++K IC
Sbjct: 119 RLTRHSLVAVSLSCTHLQYLGLAHCEWVDSLSIRSLADHCGGLRSIDLTACRQLKDEAIC 178
Query: 84 KAIRMWRDLESLTMPSIAN-PPYLMEEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPK 140
+ + SL++ AN +EE+A+NCR +L + G + S T+ Y PK
Sbjct: 179 YLSKKCLKMRSLSVAVNANITDVSVEEVAKNCRELEQLDLTGCLRVRNDSIRTVAEYCPK 238
Query: 141 LKVLSL 146
L+ L +
Sbjct: 239 LQSLKV 244
>sp|Q5XGC0|FXL15_XENTR F-box/LRR-repeat protein 15 OS=Xenopus tropicalis GN=fbxl15 PE=2
SV=1
Length = 292
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 15 VYVHGHSDKQLTRILKISLSLSRGSIRTLIFHFNLYVSDDQLTYTAERCPQLKRLVMPAW 74
++++ +S QLTR +++SLS ++ + +V L + C L+ + + A
Sbjct: 110 IHINLNSCGQLTRQSLVAISLSCPHLQNICLGHCEWVDCLSLRSLVDHCKCLEAIDLTAC 169
Query: 75 NRIKKTGICKAIRMWRDLESLTMPSIAN-PPYLMEEIAQNCRNFRELKIMGPFDLLFAS- 132
++K I ++ L+SL++ AN +EE A+NCR+ L + G + S
Sbjct: 170 RQLKDDTISYLVQKSTRLKSLSLAVNANISDIAVEETAKNCRDLEHLDLTGCLRVKNDSI 229
Query: 133 -TLNMYLPKLKVLSLR-CTTLNRDAL 156
TL Y KLK L ++ C + +L
Sbjct: 230 RTLAEYCTKLKSLKVKHCHNVTESSL 255
>sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1
Length = 423
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 107 MEEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKLKVLSL-RCTTLNRDALILILDGL 163
++ AQNCRN L + G + ++ +L+ + KLK L L C ++ +L I +G
Sbjct: 96 LKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGC 155
Query: 164 QNLEVLNISHC 174
+NLE LN+S C
Sbjct: 156 RNLEYLNLSWC 166
Score = 35.0 bits (79), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 30/157 (19%)
Query: 51 VSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMPSIAN-------- 102
+++ L +E C L+ L + ++I K GI +R R L++L +
Sbjct: 143 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 103 -PPYLME------------------EIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKL 141
Y E +I + C + L + G +L AS L + P+L
Sbjct: 203 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRL 262
Query: 142 KVL-SLRCTTLNRDALILILDGLQNLEVLNISHCLLI 177
++L + RC+ L L+ LE +++ C+LI
Sbjct: 263 QILEAARCSHLTDAGFTLLARNCHELEKMDLEECILI 299
>sp|Q9UKC9|FBXL2_HUMAN F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3
Length = 423
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 107 MEEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKLKVLSL-RCTTLNRDALILILDGL 163
++ AQNCRN L + G + ++ +L+ + KLK L L C ++ +L I +G
Sbjct: 96 LKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGC 155
Query: 164 QNLEVLNISHC 174
+NLE LN+S C
Sbjct: 156 RNLEYLNLSWC 166
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 30/157 (19%)
Query: 51 VSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMPSIAN-------- 102
+++ L +E C L+ L + ++I K GI +R R L++L +
Sbjct: 143 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 103 -PPYLME------------------EIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKL 141
Y E +I + C + L + G +L AS L + P+L
Sbjct: 203 IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRL 262
Query: 142 KVL-SLRCTTLNRDALILILDGLQNLEVLNISHCLLI 177
++L + RC+ L L+ LE +++ C+LI
Sbjct: 263 QILEAARCSHLTDAGFTLLARNCHELEKMDLEECILI 299
>sp|Q9C5D2|FBL4_ARATH F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2
SV=1
Length = 610
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 5/143 (3%)
Query: 49 LYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMPSIANPP-YLM 107
+ V+D E C L+RL + ++ G+ + + L+ LT+ +
Sbjct: 279 VSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGL 338
Query: 108 EEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKLKVLSL-RCTTLNRDALILILDGLQ 164
E IA C+ ++I G ++ + P+LK L+L C + AL I G +
Sbjct: 339 EAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCK 398
Query: 165 NLEVLNISHCLLI-DVPLAPAPK 186
+LE+L++ C I D+ + K
Sbjct: 399 SLEILHLVDCSGIGDIAMCSIAK 421
>sp|Q8BH16|FBXL2_MOUSE F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=1 SV=1
Length = 423
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 107 MEEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKLKVLSL-RCTTLNRDALILILDGL 163
++ AQNCRN L + G + ++ +L+ + KLK L L C ++ +L I +G
Sbjct: 96 LKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSVTNSSLKGISEGC 155
Query: 164 QNLEVLNISHC 174
+NLE LN+S C
Sbjct: 156 RNLEYLNLSWC 166
Score = 37.4 bits (85), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 35/179 (19%)
Query: 34 SLSRG--SIRTLIFHFNLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRD 91
+L RG ++ L+ + D+ L + C +L L + + +RI G+ + R
Sbjct: 176 ALVRGCRGLKALLLRGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHR 235
Query: 92 LESLTMPSIAN-PPYLMEEIAQNC-----------------------RNFRELKIMGPFD 127
L++L + +N + + NC RN EL+ M +
Sbjct: 236 LQALCLSGCSNLTDASLTALGLNCPRLQVLEAARCSHLTDAGFTLLARNCHELEKMDLEE 295
Query: 128 --LLFASTL---NMYLPKLKVLSLRCTTLNRDALILILD----GLQNLEVLNISHCLLI 177
L+ STL +++ PKL+ LSL L D IL L G + L VL + +CLL+
Sbjct: 296 CVLITDSTLVQLSIHCPKLQALSLSHCELITDEGILHLSSSTCGHERLRVLELDNCLLV 354
>sp|Q9FE83|SKIP2_ARATH F-box protein SKIP2 OS=Arabidopsis thaliana GN=SKIP2 PE=1 SV=1
Length = 527
Score = 39.3 bits (90), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 52 SDDQLTYTAERCPQLKRLVMPAW--NRIKKTGICKAIRMWRDLESLTMPSIANPPYLMEE 109
S+ L Y AERC L++L + W NRI G+ + +L+ L + + +
Sbjct: 301 SNFGLIYVAERCKLLRKLHIDGWRTNRIGDEGLLSVAKHCLNLQELVLIGVNATHMSLAA 360
Query: 110 IAQNCRNFRELKIMGP 125
IA NC L + G
Sbjct: 361 IASNCEKLERLALCGS 376
>sp|Q9S9V8|FBL9_ARATH Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9
PE=4 SV=1
Length = 246
Score = 38.1 bits (87), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 32 SLSLSRGSIRTLIFHFNLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRD 91
++ LS+G + L + + V+ L Y A+R L+RL + + G+ +A
Sbjct: 90 AVDLSQGGL--LEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLPL 147
Query: 92 LESLTMPSIAN-PPYLMEEIAQNCRNFRELKIMGPFDLL----FASTLNMYLPKLKVLSL 146
LE L + ++ ++ + Q+C N R LK+ D+ A + +P L+ L L
Sbjct: 148 LEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKCCDKVALAIAETMPGLRHLQL 207
Query: 147 RCTTLNRDALILILDGLQNLEVLNISHCLLIDV 179
L+ L IL+G +L+ L + CL I++
Sbjct: 208 FRNGLSETGLNAILEGCPHLKNLGLHQCLNINI 240
>sp|Q7SZ73|FXL15_XENLA F-box/LRR-repeat protein 15 OS=Xenopus laevis GN=fbxl15 PE=2 SV=1
Length = 292
Score = 38.1 bits (87), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 15 VYVHGHSDKQLTRILKISLSLSRGSIRTLIFHFNLYVSDDQLTYTAERCPQLKRLVMPAW 74
Y++ +S QLTR +++SLS ++ + +V + A+ C L+ + + A
Sbjct: 110 TYINLNSCGQLTRQSLVAISLSCPHLQNICLGHCDWVDCLSMRSLADHCKCLEAIDLTAC 169
Query: 75 NRIKKTGICKAIRMWRDLESLTMPSIAN-PPYLMEEIAQNCRNFRELKIMGPFDLLFAST 133
++K I ++ L+SL++ AN +EE A++CR+ L + G
Sbjct: 170 RQLKDDAISYLVQKSTRLKSLSLAVNANISDIAVEETAKSCRDLEHLDLTG--------- 220
Query: 134 LNMYLPKLKVLSLRCTTLNRDALILILDGLQNLEVLNISHC 174
C + D++ + + NL+ L + HC
Sbjct: 221 --------------CLRVKNDSIRTLAEYCNNLKSLKVKHC 247
>sp|A6H779|FBXL2_BOVIN F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1
Length = 423
Score = 38.1 bits (87), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 107 MEEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKLKVLSL-RCTTLNRDALILILDGL 163
++ AQNCRN L + G + ++ +L+ + KLK L L C ++ +L I +G
Sbjct: 96 LKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGC 155
Query: 164 QNLEVLNISHC 174
++LE LN+S C
Sbjct: 156 RHLEYLNLSWC 166
>sp|Q9S9X4|FBL8_ARATH Putative F-box/LRR-repeat protein 8 OS=Arabidopsis thaliana GN=FBL8
PE=4 SV=1
Length = 554
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 56 LTYTAERCPQLKRLVMPAW--NRIKKTGICKAIRMWRDLESLTMPSIANPPYL-MEEIAQ 112
L AERC L++L + W NRI G+ + +L+ L + + NP L +E I
Sbjct: 334 LALVAERCKLLRKLHIDGWKTNRIGDEGLIVVAKYCWNLQELVLIGV-NPTKLSLEAIVS 392
Query: 113 NCRNFRELKIMGPFDLLFASTLNMYLPK---LKVLSLRCTTLNRDALILILDGLQNLEVL 169
NC N L + G D + + L K L+ L ++ + D + + +G NL +
Sbjct: 393 NCLNLERLALCGS-DTVGDTELCCIAEKCLALRKLCIKNCPITDDGIKALGNGCPNLLKV 451
Query: 170 NISHC 174
+ C
Sbjct: 452 KVKKC 456
>sp|Q9M096|FBL19_ARATH Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana
GN=FBL19 PE=4 SV=1
Length = 301
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 23/149 (15%)
Query: 50 YVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMP-SIANPPYLME 108
+ ++ L+Y AERCP L+ L + + + K +L L + S +
Sbjct: 110 HCTERSLSYAAERCPNLEVLWIKNCPNVTDASMEKIAMNCPNLRELDISYSYGITHESLI 169
Query: 109 EIAQNCRNFRELK-------------IMGPFDLLF---------ASTLNMYLPKLKVLSL 146
+ ++C+N + LK I+ P D L A + Y+ +LK L +
Sbjct: 170 TLGRSCQNLKILKRNLLPRLGPSLPTIVAPLDYLATFPRYGNIEARIIGKYMTQLKHLEI 229
Query: 147 RCTTLNRDALILILDGLQNLEVLNISHCL 175
R +TL L + G NLE +++ C+
Sbjct: 230 RYSTLTARGLDSVCKGCSNLEYMDLRGCI 258
>sp|D4ABB4|FXL15_RAT F-box/LRR-repeat protein 15 OS=Rattus norvegicus GN=Fbxl15 PE=3
SV=1
Length = 300
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 50 YVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICK-AIRMWRDLESLTMPSIAN-PPYLM 107
+V L A+RCP L+ L + A ++K I A R L SL++ AN +
Sbjct: 152 WVDGLALRGLADRCPALEELDLTACRQLKDEAIVYLAQRRGAGLRSLSLAVNANVGDTAV 211
Query: 108 EEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKLKVLSLR 147
+E+A+NC L + G + TL Y P L+ L +R
Sbjct: 212 QELARNCPQLEHLDLTGCLRVGSDGVRTLAEYCPALRSLRVR 253
>sp|Q91W61|FXL15_MOUSE F-box/LRR-repeat protein 15 OS=Mus musculus GN=Fbxl15 PE=1 SV=2
Length = 300
Score = 35.0 bits (79), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 50 YVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICK-AIRMWRDLESLTMPSIAN-PPYLM 107
+V L A+RCP L+ L + A ++K I A R L SL++ AN +
Sbjct: 152 WVDGLALRGLADRCPALEELDLTACRQLKDEAIVYLAQRRGAGLRSLSLAVNANVGDTAV 211
Query: 108 EEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKLKVLSLR 147
+E+A+NC L + G + TL Y P L+ L +R
Sbjct: 212 QELARNCPQLEHLDLTGCLRVGSDGVRTLAEYCPALRSLRVR 253
>sp|Q9M0U9|SKI19_ARATH F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1
Length = 302
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 16/166 (9%)
Query: 22 DKQLTRILKISLSLSRGSIRTL-IFHFNLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKT 80
D L + + ++ S+G + + I++F D L Y A R L+ L + ++I
Sbjct: 75 DYNLEIMCRHAVDRSQGGLVDIGIWYFGTV---DLLNYIAHRSSNLRSLRLIRCSQITDD 131
Query: 81 GICKAIRMWRDLESLTMPSIANPPYLMEEIAQNCRNFRELKIM-------GPFDLLFAST 133
G +A+ + LE L + + + + Q C N + LK+ L A T
Sbjct: 132 GFVEAV-VKLPLEELELSYCSFSVESLRVVGQCCLNMKTLKLNKHPQKENDDDALAIAET 190
Query: 134 LNMYLPKLKVLSLRCTTLNRDALILILDGLQNLEVLNISHCLLIDV 179
+ PKL+ L L L+ L ILD NLE L++ C +++
Sbjct: 191 M----PKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNL 232
>sp|E2RKN7|FXL15_CANFA F-box/LRR-repeat protein 15 OS=Canis familiaris GN=FBXL15 PE=3 SV=1
Length = 300
Score = 35.0 bits (79), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 50 YVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICK-AIRMWRDLESLTMPSIAN-PPYLM 107
+V L A+RCP L+ L + A ++K I A R L SL++ AN +
Sbjct: 152 WVDGLALRGLADRCPALEELDLTACRQLKDEAIVYLAQRRGAGLRSLSLAVNANVGDAAV 211
Query: 108 EEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKLKVLSLR 147
+E+A+NC L + G + TL Y P L+ L +R
Sbjct: 212 QELARNCPELEHLDLTGCLRVGSDGVRTLAEYCPALRSLRVR 253
>sp|Q9H469|FXL15_HUMAN F-box/LRR-repeat protein 15 OS=Homo sapiens GN=FBXL15 PE=1 SV=2
Length = 300
Score = 34.7 bits (78), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 50 YVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICK-AIRMWRDLESLTMPSIAN-PPYLM 107
+V L A+RCP L+ L + A ++K I A R L SL++ AN +
Sbjct: 152 WVDGLALRGLADRCPALEELDLTACRQLKDEAIVYLAQRRGAGLRSLSLAVNANVGDAAV 211
Query: 108 EEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKLKVLSLR 147
+E+A+NC L + G + TL Y P L+ L +R
Sbjct: 212 QELARNCPELHHLDLTGCLRVGSDGVRTLAEYCPVLRSLRVR 253
>sp|Q9FDX1|SKIP1_ARATH F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1
Length = 300
Score = 34.3 bits (77), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 25/149 (16%)
Query: 50 YVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMP---SIANPPYL 106
+ SD L+Y A+RCP L+ L + + + + K R L+ L + I++ +
Sbjct: 98 HCSDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLV 157
Query: 107 MEEIAQNCRNFRELK---------IMGPFDLLF-----------ASTLNMYLPKLKVLSL 146
M I +NC N R LK +G + A + ++ L+ L +
Sbjct: 158 M--IGRNCPNLRILKRNLMDWSSRHIGSVPTEYLDACPQDGDTEADAIGKHMINLEHLEI 215
Query: 147 RCTTLNRDALILILDGLQNLEVLNISHCL 175
+ + L+ L I +G LE L++ C+
Sbjct: 216 QFSRLSVKGLASICEGCPKLEYLDLFGCV 244
>sp|P23799|ESAG8_TRYBB Putative adenylate cyclase regulatory protein OS=Trypanosoma brucei
brucei GN=ESAG8 PE=2 SV=1
Length = 630
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 85 AIRMWRDLESLTMPSIANPPYLMEEIAQNCRNFRELKIMGPFDLLFASTLNMYLPKLKVL 144
AI R LE L++ N +EE+ + N REL I G L A L L LKVL
Sbjct: 272 AIGGVRSLEKLSLSGCWNVTKGLEELCKF-SNLRELDISGCLVLGSAVVLK-NLINLKVL 329
Query: 145 SLRCTTLNRDALILILDGLQ---NLEVLNISHCLLIDVPLAPAPKKIIKKLD 193
S+ +D L+GL+ NLE LN+S C + A +K+LD
Sbjct: 330 SVSNCKNFKD-----LNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELD 376
>sp|E1BNS0|FXL15_BOVIN F-box/LRR-repeat protein 15 OS=Bos taurus GN=FBXL15 PE=3 SV=1
Length = 300
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 50 YVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICK-AIRMWRDLESLTMPSIAN-PPYLM 107
+V L A+RCP L+ L + A ++K I A R L +L++ AN +
Sbjct: 152 WVDGLALRGLADRCPALEELDLTACRQLKDEAIVYLAQRRGAGLRNLSLAVNANVGDTAV 211
Query: 108 EEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKLKVLSLR 147
+E+A+NC + L + G + TL Y P L+ L +R
Sbjct: 212 QELARNCPELQHLDLTGCLRVGSDGIRTLAEYCPALRSLRVR 253
>sp|Q0P4D1|AMN1_DANRE Protein AMN1 homolog OS=Danio rerio GN=amn1 PE=2 SV=1
Length = 249
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 13/147 (8%)
Query: 40 IRTLIFHFNLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTM-- 97
+RT++ ++ + L A RCP L+ + + + +GI R + LE +++
Sbjct: 82 LRTILLRGCAEITSEGLEVLAPRCPYLQVVDLTGCTAVTDSGIQALARHCKCLEVISLRG 141
Query: 98 -PSIANPPYLMEEIAQNCRNFRELKIMGP------FDLLFASTLNMYLPKLKVLSLRCTT 150
++++ L E+ NC+ + G L + L +L++ +RC
Sbjct: 142 CSALSDKALL--ELGGNCKMLHSIYFSGTEVTDQGVIGLATGVCSCSLKELQM--VRCRN 197
Query: 151 LNRDALILILDGLQNLEVLNISHCLLI 177
L A+ +L N+ + N C LI
Sbjct: 198 LTDLAVTAVLTNCANIRIFNFHGCPLI 224
>sp|Q9M0U7|FB221_ARATH Putative F-box protein At4g05475 OS=Arabidopsis thaliana
GN=At4g05475 PE=4 SV=2
Length = 309
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 30/191 (15%)
Query: 33 LSLSRGSIRTLIFHFNLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDL 92
+ LS+G + L + +VSD L+Y +R LK L + + + G+ I L
Sbjct: 104 VDLSQGGL--LEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTNKGVMNGIEKLPLL 161
Query: 93 ESLTMPSIANPPYLMEEIAQNCRNFRELKI-------------MGPFDLLF----ASTLN 135
E+L + ++ ++ I C + LK+ +G LL A +
Sbjct: 162 ETLVIFH-SSIKLDLKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDDALAIA 220
Query: 136 MYLPKLKVLSLRCTTLNRDALILILDGLQNLEV-LNISHCLLIDVPLAPAPKKIIKKLDR 194
+PKL+ L L L L ILDG +LE L++ C I+ ++ L++
Sbjct: 221 ESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNIN---------LVGNLEK 271
Query: 195 TILQKAARLRK 205
+++ LR+
Sbjct: 272 RCMKRIKELRR 282
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 107 MEEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKLKVLSL-RCTTLNRDALILILDGL 163
+ AQNCRN L + G A+ +L+ + KL+ L L CT++ +L + +G
Sbjct: 109 LRTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGC 168
Query: 164 QNLEVLNISHC 174
LE LNIS C
Sbjct: 169 PLLEQLNISWC 179
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 107 MEEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKLKVLSL-RCTTLNRDALILILDGL 163
+ AQNCRN L + G A+ +L+ + KL+ L L CT++ +L + +G
Sbjct: 109 LRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGC 168
Query: 164 QNLEVLNISHC 174
LE LNIS C
Sbjct: 169 PLLEQLNISWC 179
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 107 MEEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKLKVLSL-RCTTLNRDALILILDGL 163
+ AQNCRN L + G A+ +L+ + KL+ L L CT++ +L + +G
Sbjct: 109 LRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGC 168
Query: 164 QNLEVLNISHC 174
LE LNIS C
Sbjct: 169 PLLEQLNISWC 179
>sp|Q9QZH7|FXL20_RAT F-box/LRR-repeat protein 20 OS=Rattus norvegicus GN=Fbxl20 PE=1
SV=1
Length = 276
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 107 MEEIAQNCRNFRELKIMGPFDLLFAS--TLNMYLPKLKVLSL-RCTTLNRDALILILDGL 163
+ AQNCRN L + G A+ +L+ + KL+ L L CT++ +L + +G
Sbjct: 109 LRTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGC 168
Query: 164 QNLEVLNISHC 174
LE LNIS C
Sbjct: 169 PLLEQLNISWC 179
>sp|Q9FKZ1|DRL42_ARATH Probable disease resistance protein At5g66900 OS=Arabidopsis
thaliana GN=At5g66900 PE=3 SV=1
Length = 809
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 138 LPKLKVLSLRCTTLNRDALILILDGLQNLEVLNISHCL 175
L +L+VL L C+++N L +GL NL L+ISHCL
Sbjct: 696 LSRLEVLRL-CSSMNLSELPEATEGLSNLRFLDISHCL 732
>sp|Q9C626|FB37_ARATH F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2
SV=1
Length = 518
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 11/134 (8%)
Query: 48 NLYVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMPSIANPPYLM 107
++ + D+ L + RC LKRL + A + G+ +DL+ + S +
Sbjct: 114 SVSIGDEALVKISLRCRNLKRLKLRACRELTDVGMAAFAENCKDLKIFSCGSCDFGAKGV 173
Query: 108 EEIAQNCRNFRELKIM---GPFDLLFASTLNMYLPKLKVLSLRCTTL----NRDALILIL 160
+ + +C N EL I G D+ M P + SL+ L N ++
Sbjct: 174 KAVLDHCSNLEELSIKRLRGFTDI----APEMIGPGVAASSLKSICLKELYNGQCFGPVI 229
Query: 161 DGLQNLEVLNISHC 174
G +NL+ L + C
Sbjct: 230 VGAKNLKSLKLFRC 243
>sp|Q9M224|ADLO2_ARATH Protein ARABIDILLO 2 OS=Arabidopsis thaliana GN=At3g60350 PE=2 SV=1
Length = 928
Score = 32.3 bits (72), Expect = 2.8, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 5/126 (3%)
Query: 51 VSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMPSIANPPYLMEEI 110
++ D + A CP+LK+L + + I + L L N + EE
Sbjct: 166 ITSDAIRVIAFCCPKLKKLRVSGMRDVSSEAIESLAKHCPQLSDLGFLDCLN---INEEA 222
Query: 111 AQNCRNFRELKIMGPFDLLFASTLNMY--LPKLKVLSLRCTTLNRDALILILDGLQNLEV 168
+ R L + G ++ + L + LPKL L + TT++ A+ +L Q+L+V
Sbjct: 223 LGKVVSLRYLSVAGTSNIKWKVALENWEKLPKLIGLDVSRTTIDHIAVSRLLKSSQSLKV 282
Query: 169 LNISHC 174
L +C
Sbjct: 283 LCALNC 288
>sp|Q2R3K5|TIRC_ORYSJ Transport inhibitor response 1-like protein Os11g0515500 OS=Oryza
sativa subsp. japonica GN=Os11g0515500 PE=2 SV=1
Length = 568
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 110 IAQNCRNFRELKIMGPFDLLFASTLNMYLPKLKVLSLRCTTLNRDALILILDGLQNLEVL 169
I Q+C+ R L + G + MY +L++LS+ D + +L+G +NL+ L
Sbjct: 416 IVQSCKGLRRLCLSGLLTDTVFLYIGMYAERLEMLSVAFAGDTDDGMTYVLNGCKNLKKL 475
Query: 170 NI 171
I
Sbjct: 476 EI 477
>sp|C8V4D4|GRRA_EMENI SCF E3 ubiquitin ligase complex F-box protein grrA OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=grrA PE=2 SV=1
Length = 585
Score = 31.6 bits (70), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 60/148 (40%), Gaps = 30/148 (20%)
Query: 61 ERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTMPSIAN-PPYLMEEIAQNCRNFRE 119
+C +++RL + ++ G+ + R L++L + + + + + ++A+NC +
Sbjct: 159 SQCNRIERLTLTNCRKLTDIGVSDLVVGSRHLQALDVSELRSLTDHTLFKVAENCNRLQG 218
Query: 120 LKIMGPF----DLLFASTLNMYLPK-------------------------LKVLSLRCTT 150
L I G D L A + N L K L++ C
Sbjct: 219 LNITGCVKVTDDSLIAVSQNCRLLKRLKLNGVSQVTDKAILSFAQNCPSILEIDLQECKL 278
Query: 151 LNRDALILILDGLQNLEVLNISHCLLID 178
+ ++ ++ LQNL L ++HC ID
Sbjct: 279 VTNQSVTALMTTLQNLRELRLAHCTEID 306
>sp|Q9FH99|FB302_ARATH F-box protein At5g67140 OS=Arabidopsis thaliana GN=At5g67140 PE=2
SV=1
Length = 228
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 46 HFNL---YVSDDQLTYTAERCPQLKRLVMPAWNRIKKTGICKAIRMWRDLESLTM 97
H N+ +++D+ L AERC QLK + M + + G+ + R LES+ +
Sbjct: 133 HLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHVTERGLLVLVNKCRKLESINL 187
>sp|Q3A7Y4|SUCC_PELCD Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1) GN=sucC PE=3
SV=1
Length = 388
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 162 GLQNLEVLNISHCLLIDVPLAPAPKKIIKKLDRTILQKAARLRKF--LTCMEDSCIMCQR 219
GL+ +I+ L +D PL+ A K+I L R +L+K A L + L E+ +M
Sbjct: 153 GLRAFHARDIARFLGLDGPLSAAASKVILSLYRCLLEKDASLVEINPLAVTEEGRLMAMD 212
Query: 220 TK---NDEGIMRWYKYEEGLWKDDEVL 243
K +D + R + E W D+ L
Sbjct: 213 AKVSIDDSALFRQKEMLE--WLDESQL 237
>sp|P06779|RAD7_YEAST DNA repair protein RAD7 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RAD7 PE=1 SV=3
Length = 565
Score = 31.2 bits (69), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 133 TLNMYLPKLKVLSLR-CTTLNRDALILILDGLQNLEVLNISHCLLID 178
TL ++ P L LSL+ C LN ++L+ I + L NL+ LN+ LI+
Sbjct: 254 TLAIFSPHLTELSLQMCGQLNHESLLYIAEKLPNLKSLNLDGPFLIN 300
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,216,790
Number of Sequences: 539616
Number of extensions: 3286013
Number of successful extensions: 9094
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 9013
Number of HSP's gapped (non-prelim): 104
length of query: 250
length of database: 191,569,459
effective HSP length: 115
effective length of query: 135
effective length of database: 129,513,619
effective search space: 17484338565
effective search space used: 17484338565
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)