Your job contains 1 sequence.
>025613
MDSIVLPHSISVARLRAPPAGRTSGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVSALR
RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKR
ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN
GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ
IKHATEMGAQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025613
(250 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2114970 - symbol:LEJ2 "AT4G36910" species:3702... 771 1.5e-76 1
TAIR|locus:2124276 - symbol:LEJ1 "AT4G34120" species:3702... 668 1.2e-65 1
UNIPROTKB|Q74BN1 - symbol:GSU2010 "CBS domain pair-contai... 116 6.8e-11 2
TIGR_CMR|GSU_2010 - symbol:GSU_2010 "CBS domain protein" ... 116 6.8e-11 2
UNIPROTKB|Q3AFN9 - symbol:acuB "Acetoin utilization prote... 102 1.7e-09 2
TIGR_CMR|CHY_0173 - symbol:CHY_0173 "acetoin utilization ... 102 1.7e-09 2
UNIPROTKB|Q74C73 - symbol:GSU1801 "CBS domain pair-contai... 132 1.6e-08 1
TIGR_CMR|GSU_1801 - symbol:GSU_1801 "CBS domain protein" ... 132 1.6e-08 1
UNIPROTKB|Q3AFS5 - symbol:CHY_0137 "CBS/GGDEF domain prot... 118 3.6e-08 2
TIGR_CMR|CHY_0137 - symbol:CHY_0137 "CBS/GGDEF domain pro... 118 3.6e-08 2
DICTYBASE|DDB_G0289609 - symbol:DDB_G0289609 "CBS (cystat... 97 5.3e-08 2
UNIPROTKB|Q5LRC8 - symbol:SPO2201 "CBS domain protein" sp... 93 4.0e-07 2
TIGR_CMR|SPO_2201 - symbol:SPO_2201 "CBS domain protein" ... 93 4.0e-07 2
UNIPROTKB|Q47ZU9 - symbol:CPS_2970 "CBS domain protein" s... 94 9.9e-07 2
TIGR_CMR|CPS_2970 - symbol:CPS_2970 "CBS domain protein" ... 94 9.9e-07 2
UNIPROTKB|P65167 - symbol:guaB "Inosine-5'-monophosphate ... 95 2.6e-05 2
UNIPROTKB|Q0BYV1 - symbol:HNE_2660 "CBS domain protein" s... 81 0.00011 2
UNIPROTKB|Q48IU0 - symbol:PSPPH_2494 "CBS domain protein"... 82 0.00017 2
TIGR_CMR|APH_0088 - symbol:APH_0088 "inosine-5'-monophosp... 86 0.00018 2
TIGR_CMR|CHY_1949 - symbol:CHY_1949 "polyA polymerase fam... 102 0.00018 2
UNIPROTKB|Q5LLL6 - symbol:Q5LLL6 "CBS domain protein" spe... 84 0.00019 2
TIGR_CMR|SPO_A0034 - symbol:SPO_A0034 "CBS domain protein... 84 0.00019 2
UNIPROTKB|Q8EEY2 - symbol:SO_2228 "CBS domain containing ... 72 0.00055 2
TIGR_CMR|SO_2228 - symbol:SO_2228 "CBS domain protein" sp... 72 0.00055 2
UNIPROTKB|Q5SMG8 - symbol:TTHA1060 "Magnesium transporter... 112 0.00068 2
UNIPROTKB|Q482Q0 - symbol:CPS_2242 "CBS domain protein" s... 71 0.00076 2
TIGR_CMR|CPS_2242 - symbol:CPS_2242 "CBS domain protein" ... 71 0.00076 2
>TAIR|locus:2114970 [details] [associations]
symbol:LEJ2 "AT4G36910" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0045454 "cell redox
homeostasis" evidence=IDA] InterPro:IPR000644 Pfam:PF00571
PROSITE:PS51371 SMART:SM00116 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR eggNOG:COG0517 GO:GO:0045454 EMBL:Z99707
EMBL:AL161590 EMBL:AY085164 EMBL:BT003835 EMBL:BT005190
IPI:IPI00526612 PIR:H85435 RefSeq:NP_195409.1 UniGene:At.31287
UniGene:At.65827 PDB:4GQV PDB:4GQW PDBsum:4GQV PDBsum:4GQW
ProteinModelPortal:O23193 SMR:O23193 IntAct:O23193 PaxDb:O23193
PRIDE:O23193 EnsemblPlants:AT4G36910.1 GeneID:829844
KEGG:ath:AT4G36910 TAIR:At4g36910 HOGENOM:HOG000187907
InParanoid:O23193 OMA:GRTENSM PhylomeDB:O23193
ProtClustDB:CLSN2685590 Genevestigator:O23193 Uniprot:O23193
Length = 236
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 167/249 (67%), Positives = 191/249 (76%)
Query: 1 MDSIVLPHSISVARLRAPPAGRTSGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVSALR 60
MD+++ +S LRA +S +S L LP L +P C F+ + +
Sbjct: 1 MDAVLYSVPLSFTPLRA-----SSSPSSPYLLLPRFLSVQP-CHKFTFSRSFPSKSRIPS 54
Query: 61 RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKR 120
SSA A TL NS++P SGVYTVG+FMT KE+LHVVKPTTTVDEA LE+LVE R
Sbjct: 55 ASSA--AGSTLMTNSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEA-----LELLVENR 107
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
ITGFPVID+DWKLVGLVSDYDLLALDSISGSGR +NSMFPEVDSTWKTFN VQKLLSKTN
Sbjct: 108 ITGFPVIDEDWKLVGLVSDYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTN 167
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
GK+VGDLMTPAP+VV E TNLEDAA++LLETKYRRLPVVD+DGKLVGIITRGNVVRAALQ
Sbjct: 168 GKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 227
Query: 241 IKHATEMGA 249
IK + + A
Sbjct: 228 IKRSGDRNA 236
>TAIR|locus:2124276 [details] [associations]
symbol:LEJ1 "AT4G34120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0045454 "cell redox homeostasis" evidence=IDA]
[GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0517 GO:GO:0045454 EMBL:AL021961 EMBL:AL161584
HOGENOM:HOG000187907 ProtClustDB:CLSN2685590 EMBL:AF360331
EMBL:AY056339 IPI:IPI00529341 PIR:T05424 RefSeq:NP_567952.1
UniGene:At.27243 UniGene:At.49487 UniGene:At.68482 PDB:3SL7
PDBsum:3SL7 ProteinModelPortal:Q9C5D0 SMR:Q9C5D0 IntAct:Q9C5D0
STRING:Q9C5D0 PaxDb:Q9C5D0 PRIDE:Q9C5D0 ProMEX:Q9C5D0
EnsemblPlants:AT4G34120.1 GeneID:829558 KEGG:ath:AT4G34120
TAIR:At4g34120 InParanoid:Q9C5D0 OMA:KRETENS PhylomeDB:Q9C5D0
Genevestigator:Q9C5D0 Uniprot:Q9C5D0
Length = 238
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 137/207 (66%), Positives = 171/207 (82%)
Query: 46 FSVLATSSDRVSALRRSS----AVFAS-GTLTANSAAPS-SGVYTVGDFMTTKEELHVVK 99
FS+L S+ R S+ S A FA+ ++ N++ P+ +G YTVGDFMT ++ LHVVK
Sbjct: 34 FSLLPLSNRRRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVK 93
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P+T+VD+A LE+LVEK++TG PVIDD+W LVG+VSDYDLLALDSISG + D ++F
Sbjct: 94 PSTSVDDA-----LELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLF 148
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
P+VDSTWKTFNE+QKL+SKT GK+VGDLMTP+P+VVR++TNLEDAARLLLETK+RRLPVV
Sbjct: 149 PDVDSTWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVV 208
Query: 220 DADGKLVGIITRGNVVRAALQIKHATE 246
DADGKL+GI+TRGNVVRAALQIK TE
Sbjct: 209 DADGKLIGILTRGNVVRAALQIKRETE 235
>UNIPROTKB|Q74BN1 [details] [associations]
symbol:GSU2010 "CBS domain pair-containing protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 InterPro:IPR013785 Pfam:PF00571
PROSITE:PS51371 SMART:SM00116 GO:GO:0003824 Gene3D:3.20.20.70
GO:GO:0008152 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000187907 KO:K04767 RefSeq:NP_953059.1
ProteinModelPortal:Q74BN1 GeneID:2688077 KEGG:gsu:GSU2010
PATRIC:22026881 OMA:TAREDSS ProtClustDB:CLSK924560
BioCyc:GSUL243231:GH27-2044-MONOMER Uniprot:Q74BN1
Length = 144
Score = 116 (45.9 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 165 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 224
TW EV +LSKT+ V + M P P V+ T+L +AA+LL + K + VVD + +
Sbjct: 66 TW----EVHYILSKTS---VTEAMNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDR 118
Query: 225 LVGIITRGNVVRAALQI 241
LVGI+T N + A ++I
Sbjct: 119 LVGILTVTNALEALIEI 135
Score = 56 (24.8 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSD 139
P T +A V A+ ++ EK I PV+D + +VG++++
Sbjct: 12 PVTIEKDATVIEAVHLMKEKSIRRLPVMDKE-TIVGILTE 50
>TIGR_CMR|GSU_2010 [details] [associations]
symbol:GSU_2010 "CBS domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 InterPro:IPR013785 Pfam:PF00571 PROSITE:PS51371
SMART:SM00116 GO:GO:0003824 Gene3D:3.20.20.70 GO:GO:0008152
EMBL:AE017180 GenomeReviews:AE017180_GR HOGENOM:HOG000187907
KO:K04767 RefSeq:NP_953059.1 ProteinModelPortal:Q74BN1
GeneID:2688077 KEGG:gsu:GSU2010 PATRIC:22026881 OMA:TAREDSS
ProtClustDB:CLSK924560 BioCyc:GSUL243231:GH27-2044-MONOMER
Uniprot:Q74BN1
Length = 144
Score = 116 (45.9 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 165 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 224
TW EV +LSKT+ V + M P P V+ T+L +AA+LL + K + VVD + +
Sbjct: 66 TW----EVHYILSKTS---VTEAMNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDR 118
Query: 225 LVGIITRGNVVRAALQI 241
LVGI+T N + A ++I
Sbjct: 119 LVGILTVTNALEALIEI 135
Score = 56 (24.8 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSD 139
P T +A V A+ ++ EK I PV+D + +VG++++
Sbjct: 12 PVTIEKDATVIEAVHLMKEKSIRRLPVMDKE-TIVGILTE 50
>UNIPROTKB|Q3AFN9 [details] [associations]
symbol:acuB "Acetoin utilization protein AcuB"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR000644 InterPro:IPR002912 Pfam:PF00571 Pfam:PF01842
PROSITE:PS51371 SMART:SM00116 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0517 GO:GO:0006091
GO:GO:0016597 GO:GO:0045150 RefSeq:YP_359045.1
ProteinModelPortal:Q3AFN9 STRING:Q3AFN9 GeneID:3726273
KEGG:chy:CHY_0173 PATRIC:21273531 HOGENOM:HOG000187908 KO:K04767
OMA:VQTMNPI BioCyc:CHYD246194:GJCN-174-MONOMER Uniprot:Q3AFN9
Length = 210
Score = 102 (41.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
VGD+M V +E+AA+++LE + LPV+ D +LVGIIT+G++V A ++
Sbjct: 73 VGDIMQKRVVTAHPLDPVEEAAKMMLENRVGCLPVL-LDDELVGIITQGDIVMAFAEL 129
Score = 93 (37.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 29/58 (50%), Positives = 32/58 (55%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
V D MT EL VK T T+ EA EKRI PV+DD KLVG+VSD DL
Sbjct: 3 VKDIMT--RELITVKSTDTIREAMAKGH-----EKRIRHLPVVDDG-KLVGIVSDRDL 52
>TIGR_CMR|CHY_0173 [details] [associations]
symbol:CHY_0173 "acetoin utilization protein AcuB"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR000644 InterPro:IPR002912 Pfam:PF00571 Pfam:PF01842
PROSITE:PS51371 SMART:SM00116 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0517 GO:GO:0006091
GO:GO:0016597 GO:GO:0045150 RefSeq:YP_359045.1
ProteinModelPortal:Q3AFN9 STRING:Q3AFN9 GeneID:3726273
KEGG:chy:CHY_0173 PATRIC:21273531 HOGENOM:HOG000187908 KO:K04767
OMA:VQTMNPI BioCyc:CHYD246194:GJCN-174-MONOMER Uniprot:Q3AFN9
Length = 210
Score = 102 (41.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
VGD+M V +E+AA+++LE + LPV+ D +LVGIIT+G++V A ++
Sbjct: 73 VGDIMQKRVVTAHPLDPVEEAAKMMLENRVGCLPVL-LDDELVGIITQGDIVMAFAEL 129
Score = 93 (37.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 29/58 (50%), Positives = 32/58 (55%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
V D MT EL VK T T+ EA EKRI PV+DD KLVG+VSD DL
Sbjct: 3 VKDIMT--RELITVKSTDTIREAMAKGH-----EKRIRHLPVVDDG-KLVGIVSDRDL 52
>UNIPROTKB|Q74C73 [details] [associations]
symbol:GSU1801 "CBS domain pair-containing protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 InterPro:IPR013785 Pfam:PF00571
PROSITE:PS51371 SMART:SM00116 GO:GO:0003824 Gene3D:3.20.20.70
GO:GO:0008152 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000187907 RefSeq:NP_952851.1 ProteinModelPortal:Q74C73
GeneID:2688718 KEGG:gsu:GSU1801 PATRIC:22026457 OMA:NGWCVAD
ProtClustDB:CLSK828567 BioCyc:GSUL243231:GH27-1844-MONOMER
Uniprot:Q74C73
Length = 149
Score = 132 (51.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 49/156 (31%), Positives = 75/156 (48%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MTT + + TT+ E E+ + RI PV+D+ L G+V++ DL+
Sbjct: 3 TVRDIMTTN--VVTARRETTIREL-----AELFSKYRIGSIPVVDEAGNLAGIVTESDLI 55
Query: 144 ALDSISGSGRADNSMFPEV---DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
D S S+F V +S K E+QK+ G+ GD+ T V T
Sbjct: 56 EQDK-SLHIPTVISLFDWVIYLESAKKFEREIQKV----TGQTAGDIYTTEVESVTPETP 110
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+ A ++ K LPVV+ KLVGI++R +++R
Sbjct: 111 VSTVADIMANKKLHTLPVVEGK-KLVGIVSRIDLIR 145
>TIGR_CMR|GSU_1801 [details] [associations]
symbol:GSU_1801 "CBS domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 InterPro:IPR013785 Pfam:PF00571 PROSITE:PS51371
SMART:SM00116 GO:GO:0003824 Gene3D:3.20.20.70 GO:GO:0008152
EMBL:AE017180 GenomeReviews:AE017180_GR HOGENOM:HOG000187907
RefSeq:NP_952851.1 ProteinModelPortal:Q74C73 GeneID:2688718
KEGG:gsu:GSU1801 PATRIC:22026457 OMA:NGWCVAD ProtClustDB:CLSK828567
BioCyc:GSUL243231:GH27-1844-MONOMER Uniprot:Q74C73
Length = 149
Score = 132 (51.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 49/156 (31%), Positives = 75/156 (48%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MTT + + TT+ E E+ + RI PV+D+ L G+V++ DL+
Sbjct: 3 TVRDIMTTN--VVTARRETTIREL-----AELFSKYRIGSIPVVDEAGNLAGIVTESDLI 55
Query: 144 ALDSISGSGRADNSMFPEV---DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
D S S+F V +S K E+QK+ G+ GD+ T V T
Sbjct: 56 EQDK-SLHIPTVISLFDWVIYLESAKKFEREIQKV----TGQTAGDIYTTEVESVTPETP 110
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+ A ++ K LPVV+ KLVGI++R +++R
Sbjct: 111 VSTVADIMANKKLHTLPVVEGK-KLVGIVSRIDLIR 145
>UNIPROTKB|Q3AFS5 [details] [associations]
symbol:CHY_0137 "CBS/GGDEF domain protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 InterPro:IPR001054
InterPro:IPR013785 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
Pfam:PF00990 Gene3D:3.20.20.70 GO:GO:0035556 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0517 GO:GO:0005622
SUPFAM:SSF55073 GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160
TIGRFAMs:TIGR00254 PROSITE:PS50887 RefSeq:YP_359009.1
ProteinModelPortal:Q3AFS5 STRING:Q3AFS5 GeneID:3727538
KEGG:chy:CHY_0137 PATRIC:21273467 HOGENOM:HOG000262568 OMA:EIAIIFL
BioCyc:CHYD246194:GJCN-137-MONOMER Uniprot:Q3AFS5
Length = 271
Score = 118 (46.6 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L+ ++V D MT PVV+ E L DA + +LE RLPV+D G L GIITR +
Sbjct: 54 LIFYPENRLVIDAMTEEPVVIEEKAYLFDAYQKMLENNIERLPVIDESGALTGIITRKVI 113
Query: 235 VR 236
R
Sbjct: 114 ER 115
Score = 66 (28.3 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 12/32 (37%), Positives = 24/32 (75%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
A E++ +RI G PV++++ KL+G+++ DL+
Sbjct: 25 AKELMRSQRIGGLPVVENE-KLIGIITSKDLI 55
>TIGR_CMR|CHY_0137 [details] [associations]
symbol:CHY_0137 "CBS/GGDEF domain protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 InterPro:IPR001054
InterPro:IPR013785 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
Pfam:PF00990 Gene3D:3.20.20.70 GO:GO:0035556 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0517 GO:GO:0005622
SUPFAM:SSF55073 GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160
TIGRFAMs:TIGR00254 PROSITE:PS50887 RefSeq:YP_359009.1
ProteinModelPortal:Q3AFS5 STRING:Q3AFS5 GeneID:3727538
KEGG:chy:CHY_0137 PATRIC:21273467 HOGENOM:HOG000262568 OMA:EIAIIFL
BioCyc:CHYD246194:GJCN-137-MONOMER Uniprot:Q3AFS5
Length = 271
Score = 118 (46.6 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L+ ++V D MT PVV+ E L DA + +LE RLPV+D G L GIITR +
Sbjct: 54 LIFYPENRLVIDAMTEEPVVIEEKAYLFDAYQKMLENNIERLPVIDESGALTGIITRKVI 113
Query: 235 VR 236
R
Sbjct: 114 ER 115
Score = 66 (28.3 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 12/32 (37%), Positives = 24/32 (75%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
A E++ +RI G PV++++ KL+G+++ DL+
Sbjct: 25 AKELMRSQRIGGLPVVENE-KLIGIITSKDLI 55
>DICTYBASE|DDB_G0289609 [details] [associations]
symbol:DDB_G0289609 "CBS
(cystathionine-beta-synthase) domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000644
Pfam:PF00571 PROSITE:PS51371 SMART:SM00116 dictyBase:DDB_G0289609
eggNOG:COG0517 EMBL:AAFI02000147 RefSeq:XP_636127.1
ProteinModelPortal:Q54H97 STRING:Q54H97 PRIDE:Q54H97
EnsemblProtists:DDB0230005 GeneID:8627230 KEGG:ddi:DDB_G0289609
InParanoid:Q54H97 OMA:NANSIHR ProtClustDB:CLSZ2429757
Uniprot:Q54H97
Length = 145
Score = 97 (39.2 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 23/87 (26%), Positives = 45/87 (51%)
Query: 155 DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 214
D + DS + N +L K V +M PV + + + + +AA+L+ T
Sbjct: 52 DRDLRLATDSPFLPENNEDRL-EKLRLHKVSSIMKQNPVTIEDFSPVVEAAKLMRVTNVG 110
Query: 215 RLPVVDADGKLVGIITRGNVVRAALQI 241
LPV+D G+L+G++TR +++ +++
Sbjct: 111 GLPVLDKKGRLIGMVTRSDLLDLLIKV 137
Score = 70 (29.7 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL-LALDS 147
+ L + TT+D AL+ L I PV+D+D L G+++D DL LA DS
Sbjct: 11 KSLFTINLDTTLD-----VALKSLNANSIHRLPVVDNDGNLKGIITDRDLRLATDS 61
>UNIPROTKB|Q5LRC8 [details] [associations]
symbol:SPO2201 "CBS domain protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
EMBL:CP000031 GenomeReviews:CP000031_GR HOGENOM:HOG000187909
OMA:ERMTDRR RefSeq:YP_167427.1 ProteinModelPortal:Q5LRC8
GeneID:3192666 KEGG:sil:SPO2201 PATRIC:23377753
ProtClustDB:CLSK933793 Uniprot:Q5LRC8
Length = 144
Score = 93 (37.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 172 VQKLLSKTNGKM---VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
V++L + +G + V MT + ++D + E ++R +PV++ +GKLVG+
Sbjct: 58 VRELAASGSGCLSEPVSTYMTKDLITCGRDAKVQDVLSQMTEGRFRHMPVIE-EGKLVGL 116
Query: 229 ITRGNVVRAAL 239
+T G+VV+A L
Sbjct: 117 VTLGDVVKAQL 127
Score = 68 (29.0 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 107 AFVPTALEILVEKRITGFPVIDDDWKLV-GLVSDYDLLALDSISGSG 152
A V A IL EKRI G V+ DD + G++S+ D++ + SGSG
Sbjct: 22 ATVAQAAAILAEKRI-GTVVVSDDGETAQGILSERDIVRELAASGSG 67
>TIGR_CMR|SPO_2201 [details] [associations]
symbol:SPO_2201 "CBS domain protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
EMBL:CP000031 GenomeReviews:CP000031_GR HOGENOM:HOG000187909
OMA:ERMTDRR RefSeq:YP_167427.1 ProteinModelPortal:Q5LRC8
GeneID:3192666 KEGG:sil:SPO2201 PATRIC:23377753
ProtClustDB:CLSK933793 Uniprot:Q5LRC8
Length = 144
Score = 93 (37.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 172 VQKLLSKTNGKM---VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
V++L + +G + V MT + ++D + E ++R +PV++ +GKLVG+
Sbjct: 58 VRELAASGSGCLSEPVSTYMTKDLITCGRDAKVQDVLSQMTEGRFRHMPVIE-EGKLVGL 116
Query: 229 ITRGNVVRAAL 239
+T G+VV+A L
Sbjct: 117 VTLGDVVKAQL 127
Score = 68 (29.0 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 107 AFVPTALEILVEKRITGFPVIDDDWKLV-GLVSDYDLLALDSISGSG 152
A V A IL EKRI G V+ DD + G++S+ D++ + SGSG
Sbjct: 22 ATVAQAAAILAEKRI-GTVVVSDDGETAQGILSERDIVRELAASGSG 67
>UNIPROTKB|Q47ZU9 [details] [associations]
symbol:CPS_2970 "CBS domain protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
eggNOG:COG0517 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000187907 RefSeq:YP_269670.1 ProteinModelPortal:Q47ZU9
STRING:Q47ZU9 GeneID:3522254 KEGG:cps:CPS_2970 PATRIC:21468959
OMA:LEHRISG BioCyc:CPSY167879:GI48-3019-MONOMER Uniprot:Q47ZU9
Length = 147
Score = 94 (38.1 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 179 TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
T G++V D MT + TNL D A L R LPVV+ GK+VG++ R V+
Sbjct: 68 TIGELVRDRMTTEVESIGTNTNLVDVAEKFLHNNRRVLPVVEG-GKVVGLVQRRGVLEQL 126
Query: 239 LQ 240
L+
Sbjct: 127 LE 128
Score = 64 (27.6 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 91 TKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
T E + P + ++ V AL L+ ++G PV+D D L+G +S+ D +
Sbjct: 5 TAETIMDRSPLSFRPDSGVIVALRQLLTASLSGAPVVDGDNNLIGFLSEADCM 57
>TIGR_CMR|CPS_2970 [details] [associations]
symbol:CPS_2970 "CBS domain protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
eggNOG:COG0517 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000187907 RefSeq:YP_269670.1 ProteinModelPortal:Q47ZU9
STRING:Q47ZU9 GeneID:3522254 KEGG:cps:CPS_2970 PATRIC:21468959
OMA:LEHRISG BioCyc:CPSY167879:GI48-3019-MONOMER Uniprot:Q47ZU9
Length = 147
Score = 94 (38.1 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 179 TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
T G++V D MT + TNL D A L R LPVV+ GK+VG++ R V+
Sbjct: 68 TIGELVRDRMTTEVESIGTNTNLVDVAEKFLHNNRRVLPVVEG-GKVVGLVQRRGVLEQL 126
Query: 239 LQ 240
L+
Sbjct: 127 LE 128
Score = 64 (27.6 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 91 TKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
T E + P + ++ V AL L+ ++G PV+D D L+G +S+ D +
Sbjct: 5 TAETIMDRSPLSFRPDSGVIVALRQLLTASLSGAPVVDGDNNLIGFLSEADCM 57
>UNIPROTKB|P65167 [details] [associations]
symbol:guaB "Inosine-5'-monophosphate dehydrogenase"
species:1773 "Mycobacterium tuberculosis" [GO:0003938 "IMP
dehydrogenase activity" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006177 "GMP biosynthetic process" evidence=IDA] [GO:0006204
"IMP catabolic process" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] [GO:0097293 "XMP biosynthetic process" evidence=IDA]
UniPathway:UPA00601 HAMAP:MF_01964 InterPro:IPR000644
InterPro:IPR001093 InterPro:IPR005990 InterPro:IPR013785
InterPro:IPR015875 Pfam:PF00478 Pfam:PF00571 PIRSF:PIRSF000130
PROSITE:PS00487 PROSITE:PS51371 SMART:SM00116 GO:GO:0005886
GO:GO:0040007 GO:GO:0005618 Gene3D:3.20.20.70 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 eggNOG:COG0517 GO:GO:0006177 KO:K00088 GO:GO:0003938
PANTHER:PTHR11911:SF6 TIGRFAMs:TIGR01302 OMA:SAGLKES
HOGENOM:HOG000165755 ProtClustDB:PRK05567 PIR:H70736
RefSeq:NP_217928.1 RefSeq:NP_338043.1 RefSeq:YP_006516897.1
ProteinModelPortal:P65167 SMR:P65167 PRIDE:P65167
EnsemblBacteria:EBMYCT00000000064 EnsemblBacteria:EBMYCT00000069182
GeneID:13317015 GeneID:887498 GeneID:922953 KEGG:mtc:MT3519
KEGG:mtu:Rv3411c KEGG:mtv:RVBD_3411c PATRIC:18129477
TubercuList:Rv3411c GO:GO:0006204 GO:GO:0097293 Uniprot:P65167
Length = 529
Score = 95 (38.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 182 KMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
K V ++MT AP++ +E + A LL K +LPVVD G+L G+IT + V+
Sbjct: 183 KQVAEVMTKAPLITAQEGVSASAALGLLRRNKIEKLPVVDGRGRLTGLITVKDFVK 238
Score = 74 (31.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 22/96 (22%), Positives = 46/96 (47%)
Query: 48 VLATSSDRVSALRRSSAVFASGTL-TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDE 106
+++++ D V+ R + A+ +G + + P + + + E V P T +
Sbjct: 80 LVSSAMDTVTESRMAIAMARAGGMGVLHRNLPVAEQAGQVEMVKRSEAGMVTDPVTCRPD 139
Query: 107 AFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
+ + RI+G PV+DDD LVG++++ D+
Sbjct: 140 NTLAQVDALCARFRISGLPVVDDDGALVGIITNRDM 175
>UNIPROTKB|Q0BYV1 [details] [associations]
symbol:HNE_2660 "CBS domain protein" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
eggNOG:COG0517 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000187909 OMA:ERMTDRR RefSeq:YP_761342.1
ProteinModelPortal:Q0BYV1 STRING:Q0BYV1 GeneID:4287219
KEGG:hne:HNE_2660 PATRIC:32218185
BioCyc:HNEP228405:GI69-2670-MONOMER Uniprot:Q0BYV1
Length = 144
Score = 81 (33.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/53 (30%), Positives = 33/53 (62%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
VG+ MT A + + +++A +L+ + + R LPVV + +L G ++ G++V+
Sbjct: 72 VGNAMTRAVITISADAEVDEALQLMTDRRIRHLPVV-RNSRLTGFVSIGDLVK 123
Score = 63 (27.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 155
A +L E+RI +D D ++VG++S+ D++ + G G D
Sbjct: 26 AARLLDERRIGAVVTLDADGEIVGVLSERDIVRQFARQGEGALD 69
>UNIPROTKB|Q48IU0 [details] [associations]
symbol:PSPPH_2494 "CBS domain protein" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371
SMART:SM00116 eggNOG:COG0517 EMBL:CP000058
GenomeReviews:CP000058_GR HOGENOM:HOG000187909 RefSeq:YP_274691.1
ProteinModelPortal:Q48IU0 STRING:Q48IU0 GeneID:3557460
KEGG:psp:PSPPH_2494 PATRIC:19974275 OMA:YARKVIL
ProtClustDB:CLSK865716 Uniprot:Q48IU0
Length = 146
Score = 82 (33.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/59 (28%), Positives = 37/59 (62%)
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
G V ++M+ + V ++E ++ ++ R LPVV+ DG+L+G+++ G++V+ A+
Sbjct: 72 GTPVREIMSNKVITVDSQQSVEACMGIMTDSHLRHLPVVE-DGRLLGLLSIGDLVKEAI 129
Score = 60 (26.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYD 141
+++H + P + V AL ++ EK I PV++ + +VG+VS+ D
Sbjct: 16 QQVHTIGP-----DQMVLDALRLMAEKNIGALPVVEGN-VVVGVVSERD 58
>TIGR_CMR|APH_0088 [details] [associations]
symbol:APH_0088 "inosine-5'-monophosphate dehydrogenase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003938 "IMP
dehydrogenase activity" evidence=ISS] [GO:0009152 "purine
ribonucleotide biosynthetic process" evidence=ISS]
UniPathway:UPA00601 HAMAP:MF_01964 InterPro:IPR000644
InterPro:IPR001093 InterPro:IPR005990 InterPro:IPR013785
InterPro:IPR015875 Pfam:PF00478 Pfam:PF00571 PIRSF:PIRSF000130
PROSITE:PS00487 PROSITE:PS51371 SMART:SM00116 Gene3D:3.20.20.70
GO:GO:0000166 GO:GO:0046872 eggNOG:COG0517 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0006177 KO:K00088 GO:GO:0003938
PANTHER:PTHR11911:SF6 TIGRFAMs:TIGR01302 OMA:SAGLKES
HOGENOM:HOG000165755 ProtClustDB:CLSK749478 RefSeq:YP_504716.1
ProteinModelPortal:Q2GLN5 SMR:Q2GLN5 STRING:Q2GLN5 GeneID:3930597
KEGG:aph:APH_0088 PATRIC:20948738
BioCyc:APHA212042:GHPM-123-MONOMER Uniprot:Q2GLN5
Length = 486
Score = 86 (35.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 16/53 (30%), Positives = 34/53 (64%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 149
V P T +A + TAL I+ + +G PV++++ KLVG++++ D+ ++ ++
Sbjct: 90 VSNPVTVSPDATLKTALSIMQQHSYSGIPVVEENKKLVGIITNRDVRFVEDMN 142
Score = 75 (31.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 184 VGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
V D+MT +V VRE + +A RLL + K RL V D G +G+IT
Sbjct: 145 VCDIMTKENLVTVREGVSQSEATRLLHKHKIERLIVTDEYGCCIGLIT 192
>TIGR_CMR|CHY_1949 [details] [associations]
symbol:CHY_1949 "polyA polymerase family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006396 "RNA processing" evidence=ISS] [GO:0016779
"nucleotidyltransferase activity" evidence=ISS] InterPro:IPR000644
InterPro:IPR001667 InterPro:IPR002646 InterPro:IPR013785
Pfam:PF00571 Pfam:PF01368 Pfam:PF01743 PROSITE:PS51371
SMART:SM00116 GO:GO:0005524 Gene3D:3.20.20.70 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0006396 GO:GO:0016787
GO:GO:0030145 eggNOG:COG0617 KO:K00974 GO:GO:0016779
RefSeq:YP_360768.1 ProteinModelPortal:Q3AAR6 STRING:Q3AAR6
GeneID:3728062 KEGG:chy:CHY_1949 PATRIC:21276985
HOGENOM:HOG000011569 OMA:FRAIRFE
BioCyc:CHYD246194:GJCN-1948-MONOMER Uniprot:Q3AAR6
Length = 864
Score = 102 (41.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 171 EVQKLLSKTNGKM-VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
+V K++ G V M+ PV + +LE+A RLL++ RLPVV+ GKL+GII
Sbjct: 357 DVDKIIHHNLGHAPVKAYMSKNPVTIEPEASLEEALRLLIKHDIGRLPVVEG-GKLIGII 415
Query: 230 TRGNVVR 236
+R ++++
Sbjct: 416 SRTDLLK 422
Score = 63 (27.2 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 103 TVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
TVD V A +I+V +G PV++ D KLVG++S D+
Sbjct: 321 TVDST-VEEARKIMVRYGHSGLPVLEGD-KLVGIISRRDV 358
>UNIPROTKB|Q5LLL6 [details] [associations]
symbol:Q5LLL6 "CBS domain protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000644
Pfam:PF00571 PROSITE:PS51371 SMART:SM00116 HOGENOM:HOG000187909
EMBL:CP000032 GenomeReviews:CP000032_GR RefSeq:YP_164865.1
ProteinModelPortal:Q5LLL6 GeneID:3196778 KEGG:sil:SPOA0034
PATRIC:23381368 OMA:NIGALIC ProtClustDB:CLSK751667 Uniprot:Q5LLL6
Length = 174
Score = 84 (34.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
Q L + G M + T AP ET N+ + + E ++R LPV+ DGKL G+IT G
Sbjct: 98 QTLPQQAEGLMTRAVQTCAP---DETLNV--VLKRMTEGRFRHLPVM-RDGKLCGMITIG 151
Query: 233 NVVRAALQ 240
+VV L+
Sbjct: 152 DVVNFRLR 159
Score = 62 (26.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 68 SGTLTANSAAPSSGVYTVGDFMTTK-EELHVVKPTTTVDEAFVPTALEILVEKRITGFPV 126
S + ++N A S TV D + K E + V+P T+ + + +L +KRI V
Sbjct: 21 SQSASSNLAQSQS---TVADLLGGKGEAVFSVRPGDTIGQV-----VGVLKDKRIGAVLV 72
Query: 127 IDDDWKLVGLVSDYDLL 143
D + L+G++S+ D++
Sbjct: 73 TDQNGALLGILSERDIV 89
>TIGR_CMR|SPO_A0034 [details] [associations]
symbol:SPO_A0034 "CBS domain protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
HOGENOM:HOG000187909 EMBL:CP000032 GenomeReviews:CP000032_GR
RefSeq:YP_164865.1 ProteinModelPortal:Q5LLL6 GeneID:3196778
KEGG:sil:SPOA0034 PATRIC:23381368 OMA:NIGALIC
ProtClustDB:CLSK751667 Uniprot:Q5LLL6
Length = 174
Score = 84 (34.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
Q L + G M + T AP ET N+ + + E ++R LPV+ DGKL G+IT G
Sbjct: 98 QTLPQQAEGLMTRAVQTCAP---DETLNV--VLKRMTEGRFRHLPVM-RDGKLCGMITIG 151
Query: 233 NVVRAALQ 240
+VV L+
Sbjct: 152 DVVNFRLR 159
Score = 62 (26.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 68 SGTLTANSAAPSSGVYTVGDFMTTK-EELHVVKPTTTVDEAFVPTALEILVEKRITGFPV 126
S + ++N A S TV D + K E + V+P T+ + + +L +KRI V
Sbjct: 21 SQSASSNLAQSQS---TVADLLGGKGEAVFSVRPGDTIGQV-----VGVLKDKRIGAVLV 72
Query: 127 IDDDWKLVGLVSDYDLL 143
D + L+G++S+ D++
Sbjct: 73 TDQNGALLGILSERDIV 89
>UNIPROTKB|Q8EEY2 [details] [associations]
symbol:SO_2228 "CBS domain containing protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371
SMART:SM00116 EMBL:AE014299 GenomeReviews:AE014299_GR
HOGENOM:HOG000187907 RefSeq:NP_717825.1 ProteinModelPortal:Q8EEY2
GeneID:1169964 KEGG:son:SO_2228 PATRIC:23524087 OMA:YHCQDTH
ProtClustDB:CLSK906643 Uniprot:Q8EEY2
Length = 138
Score = 72 (30.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+V D M + V ++ A +L K + PVVD +GK++G I R NV+RA
Sbjct: 72 VVKDCMRTEVLYVGPDESILQLAEQMLGAKPKIYPVVD-NGKVIGTINRTNVLRA 125
Score = 67 (28.6 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 111 TALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 145
TA+E L++ G V+DD LVG +S D LA+
Sbjct: 25 TAVEKLLDNNKMGAAVVDDSGNLVGFLSQQDCLAV 59
>TIGR_CMR|SO_2228 [details] [associations]
symbol:SO_2228 "CBS domain protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
EMBL:AE014299 GenomeReviews:AE014299_GR HOGENOM:HOG000187907
RefSeq:NP_717825.1 ProteinModelPortal:Q8EEY2 GeneID:1169964
KEGG:son:SO_2228 PATRIC:23524087 OMA:YHCQDTH ProtClustDB:CLSK906643
Uniprot:Q8EEY2
Length = 138
Score = 72 (30.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+V D M + V ++ A +L K + PVVD +GK++G I R NV+RA
Sbjct: 72 VVKDCMRTEVLYVGPDESILQLAEQMLGAKPKIYPVVD-NGKVIGTINRTNVLRA 125
Score = 67 (28.6 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 111 TALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 145
TA+E L++ G V+DD LVG +S D LA+
Sbjct: 25 TAVEKLLDNNKMGAAVVDDSGNLVGFLSQQDCLAV 59
>UNIPROTKB|Q5SMG8 [details] [associations]
symbol:TTHA1060 "Magnesium transporter MgtE" species:300852
"Thermus thermophilus HB8" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0015693 "magnesium ion transport" evidence=NAS]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
InterPro:IPR000644 InterPro:IPR006667 InterPro:IPR006669
Pfam:PF00571 Pfam:PF01769 PROSITE:PS51371 SMART:SM00116
Pfam:PF03448 GO:GO:0016021 GO:GO:0005886 GO:GO:0000287
GO:GO:0015693 EMBL:AP008226 GenomeReviews:AP008226_GR GO:GO:0015095
RefSeq:YP_144326.1 PDB:2YVX PDB:2YVY PDB:2YVZ PDB:2ZY9 PDBsum:2YVX
PDBsum:2YVY PDBsum:2YVZ PDBsum:2ZY9 ProteinModelPortal:Q5SMG8
SMR:Q5SMG8 STRING:Q5SMG8 TCDB:9.A.19.1.2 GeneID:3168925
KEGG:ttj:TTHA1060 PATRIC:23957080 eggNOG:COG2239
HOGENOM:HOG000280152 KO:K06213 OMA:RYEEDEA ProtClustDB:CLSK738242
EvolutionaryTrace:Q5SMG8 InterPro:IPR006668 SMART:SM00924
TIGRFAMs:TIGR00400 Uniprot:Q5SMG8
Length = 450
Score = 112 (44.5 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
V ++M P V VR T+ E+ ARL+ + + LPVVD +G+LVGI+T +V+
Sbjct: 198 VAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVL 249
Score = 39 (18.8 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 126 VIDDDWKLVGLVSDYDLLALD 146
V+D+ +L G++S DL+ D
Sbjct: 173 VVDEKGRLKGVLSLRDLIVAD 193
>UNIPROTKB|Q482Q0 [details] [associations]
symbol:CPS_2242 "CBS domain protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
eggNOG:COG0517 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000187907 RefSeq:YP_268967.1 ProteinModelPortal:Q482Q0
STRING:Q482Q0 GeneID:3519654 KEGG:cps:CPS_2242 PATRIC:21467589
OMA:SEQDCIH BioCyc:CPSY167879:GI48-2312-MONOMER Uniprot:Q482Q0
Length = 144
Score = 71 (30.1 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 17/64 (26%), Positives = 36/64 (56%)
Query: 180 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
N ++ ++M+ + V+ ++ + + + + K + PV+D DG L+G I+R V++A
Sbjct: 69 NVAIIKNIMSREVLSVKPYDSIIELGQTMRKDKPKVYPVIDDDGNLLGTISRNEVLQACY 128
Query: 240 QIKH 243
KH
Sbjct: 129 --KH 130
Score = 68 (29.0 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 101 TTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
T +V+EA L L K+I G PV+D ++K++G +S+ D+L
Sbjct: 20 TMSVEEA----TLRFLKTKQIGG-PVVDQNYKVLGFISEGDVL 57
>TIGR_CMR|CPS_2242 [details] [associations]
symbol:CPS_2242 "CBS domain protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
eggNOG:COG0517 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000187907 RefSeq:YP_268967.1 ProteinModelPortal:Q482Q0
STRING:Q482Q0 GeneID:3519654 KEGG:cps:CPS_2242 PATRIC:21467589
OMA:SEQDCIH BioCyc:CPSY167879:GI48-2312-MONOMER Uniprot:Q482Q0
Length = 144
Score = 71 (30.1 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 17/64 (26%), Positives = 36/64 (56%)
Query: 180 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
N ++ ++M+ + V+ ++ + + + + K + PV+D DG L+G I+R V++A
Sbjct: 69 NVAIIKNIMSREVLSVKPYDSIIELGQTMRKDKPKVYPVIDDDGNLLGTISRNEVLQACY 128
Query: 240 QIKH 243
KH
Sbjct: 129 --KH 130
Score = 68 (29.0 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 101 TTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
T +V+EA L L K+I G PV+D ++K++G +S+ D+L
Sbjct: 20 TMSVEEA----TLRFLKTKQIGG-PVVDQNYKVLGFISEGDVL 57
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 250 250 0.00080 114 3 11 22 0.45 33
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 605 (64 KB)
Total size of DFA: 161 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.07u 0.15s 22.22t Elapsed: 00:00:01
Total cpu time: 22.08u 0.15s 22.23t Elapsed: 00:00:01
Start: Fri May 10 18:17:39 2013 End: Fri May 10 18:17:40 2013