BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025613
(250 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225438783|ref|XP_002283079.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Vitis vinifera]
Length = 246
Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 181/249 (72%), Positives = 204/249 (81%), Gaps = 8/249 (3%)
Query: 1 MDSIVLPHSISVARLR-APPAGRTSGRTSFALQLPCLLLSRPGCR--VFSVLATSSDRVS 57
MD+I+LP +++V +R A + SG SF Q+PC LL +PG + V S + + S+R+S
Sbjct: 1 MDAILLPETLAVVGIRPAFASAFGSGSASFPHQMPCTLLFQPGRKPPVGSTVGSRSERIS 60
Query: 58 ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILV 117
+RRS A+ A+GTL ANS +GVYTVGDFMT KE+LHVVK TTTV+EA LEILV
Sbjct: 61 GIRRSPALAAAGTLMANSVPSKNGVYTVGDFMTRKEDLHVVKATTTVEEA-----LEILV 115
Query: 118 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS 177
E RITGFPVIDDDWKLVGLVSDYDLLALDSISG G D MFPEVDSTWKTFNE+QKLLS
Sbjct: 116 ENRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGLTDTIMFPEVDSTWKTFNELQKLLS 175
Query: 178 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
KTNGK+VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD+DGKLVGIITRGNVVRA
Sbjct: 176 KTNGKVVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDSDGKLVGIITRGNVVRA 235
Query: 238 ALQIKHATE 246
ALQIK A E
Sbjct: 236 ALQIKRAVE 244
>gi|317106695|dbj|BAJ53196.1| JHL03K20.5 [Jatropha curcas]
Length = 236
Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 186/249 (74%), Positives = 201/249 (80%), Gaps = 19/249 (7%)
Query: 1 MDSIV---LPHSISVARLRAPPAGRTSGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVS 57
MDSI+ L H + + RLRA TS SFA QLPCLL SRPG R+ + A +S
Sbjct: 1 MDSILHQELLH-LPITRLRATA---TSPIVSFAQQLPCLLSSRPGRRLLPLSA-----IS 51
Query: 58 ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILV 117
RRSSA+ ASG A+S P SGVYTVGDFMT KE+L VVKPTTTVDEA L+ LV
Sbjct: 52 HPRRSSAIAASGAFVASS--PKSGVYTVGDFMTRKEDLQVVKPTTTVDEA-----LQTLV 104
Query: 118 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS 177
E RITGFPVIDDDWKLVGLVSDYDLLALDSISG GR DNSMFPEVDSTWKTFNEVQKLLS
Sbjct: 105 EHRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGRTDNSMFPEVDSTWKTFNEVQKLLS 164
Query: 178 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
KTNGK+VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD++GKLVGIITRGNVVRA
Sbjct: 165 KTNGKLVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDSEGKLVGIITRGNVVRA 224
Query: 238 ALQIKHATE 246
AL+IK + E
Sbjct: 225 ALEIKRSIE 233
>gi|255587643|ref|XP_002534340.1| conserved hypothetical protein [Ricinus communis]
gi|223525462|gb|EEF28042.1| conserved hypothetical protein [Ricinus communis]
Length = 239
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/219 (78%), Positives = 182/219 (83%), Gaps = 11/219 (5%)
Query: 28 SFALQLPCLLLSRPGCRVFSVLATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGD 87
SFA QLPCLL S R L+ +S RRSS + A+GTL ANS P SGVYTVGD
Sbjct: 29 SFAHQLPCLLSSATVSRRLFHLSV----ISWPRRSSTISATGTLMANS--PKSGVYTVGD 82
Query: 88 FMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 147
FMT KE+L VVKPTTTVDEA L+ LVE RITGFPVIDDDWKLVGLVSDYDLLALDS
Sbjct: 83 FMTRKEDLCVVKPTTTVDEA-----LQTLVEHRITGFPVIDDDWKLVGLVSDYDLLALDS 137
Query: 148 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 207
ISG GR DNSMFPEVDSTWKTFNEVQKLLSKTNGK+VGDLMTPAPVVVRETTNLEDAARL
Sbjct: 138 ISGGGRTDNSMFPEVDSTWKTFNEVQKLLSKTNGKLVGDLMTPAPVVVRETTNLEDAARL 197
Query: 208 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
LLETKYRRLPVVDA+GKLVGIITRGNVVRAAL+IK E
Sbjct: 198 LLETKYRRLPVVDAEGKLVGIITRGNVVRAALEIKRDME 236
>gi|147802944|emb|CAN64036.1| hypothetical protein VITISV_021555 [Vitis vinifera]
Length = 288
Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/291 (62%), Positives = 203/291 (69%), Gaps = 50/291 (17%)
Query: 1 MDSIVLPHSISVARLR-APPAGRTSGRTSFALQLPCLLLSRPGCR--VFSVLATSSDRVS 57
MD+I+ P +++V +R A + SG SF Q+PC LL +PG + V S + + S+R+S
Sbjct: 1 MDAILPPETLAVVGIRPAFASAFGSGSASFPHQMPCTLLFQPGRKPPVGSTVGSRSERIS 60
Query: 58 ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILV 117
LRRS A+ A+GTL ANS +GVYTVGDFMT KE+LHVVK TTTV+EA LEILV
Sbjct: 61 GLRRSPALAAAGTLMANSVPSKNGVYTVGDFMTRKEDLHVVKATTTVEEA-----LEILV 115
Query: 118 EKRITGFPVIDDDWKLVGLVSDYDLLALDSIS---------------------------- 149
E RITGFPVIDDDWKLVGLVSDYDLLALDSIS
Sbjct: 116 ENRITGFPVIDDDWKLVGLVSDYDLLALDSISELPQLKHVPEDISGKSLVLHGSLERQMK 175
Query: 150 --------------GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV 195
G G D MFPEVDSTWKTFNE+QKLLSKTNGK+VGDLMTPAPVVV
Sbjct: 176 SLFLTAVDVLIFGSGGGLTDTIMFPEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAPVVV 235
Query: 196 RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
RETTNLEDAARLLLETKYRRLPVVD+DGKLVGIITRGNVVRAALQIK A E
Sbjct: 236 RETTNLEDAARLLLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRAVE 286
>gi|224081731|ref|XP_002306482.1| predicted protein [Populus trichocarpa]
gi|222855931|gb|EEE93478.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 318 bits (816), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 167/220 (75%), Positives = 183/220 (83%), Gaps = 15/220 (6%)
Query: 33 LPCLLLSRPGCRVFSVLATSSDRVSALRRSSAVFA---SGTLTANSAAPSSGVYTVGDFM 89
+PCLL S PG ++ S+ + +S RRS ++ A SGTL ANS P SGVYTVGDFM
Sbjct: 1 MPCLLFSTPGRKLVSLSS-----ISWPRRSPSLIAAASSGTLMANS--PKSGVYTVGDFM 53
Query: 90 TTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 149
T KE+LHVVKPTTTV+EA LE LVE+RITGFPVIDDDWKLVGLVSDYDLLALDSIS
Sbjct: 54 TRKEDLHVVKPTTTVNEA-----LETLVERRITGFPVIDDDWKLVGLVSDYDLLALDSIS 108
Query: 150 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 209
G GR + +MFPEVDSTWKTFNEVQ LL+KTNGK+VGDLMTPAPVVVRETTNLED+ RLLL
Sbjct: 109 GGGRTETNMFPEVDSTWKTFNEVQMLLNKTNGKVVGDLMTPAPVVVRETTNLEDSVRLLL 168
Query: 210 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 249
ETKYRRLPVVDADGKLVGIITRGNVVRAAL IKHA E A
Sbjct: 169 ETKYRRLPVVDADGKLVGIITRGNVVRAALHIKHAMERKA 208
>gi|449443418|ref|XP_004139474.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
Length = 235
Score = 312 bits (800), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 167/242 (69%), Positives = 188/242 (77%), Gaps = 23/242 (9%)
Query: 9 SISVARLRAPPAGRTSGRTSFALQL----PCLLLSRPGCRVFSVLATSSDRVSALRRSSA 64
S+S+A RA SF++Q PC RP + A+ + LR+S++
Sbjct: 10 SLSLAPFRA---------KSFSVQEMLFGPC---RRPSLPILH--ASVAQSFPELRKSTS 55
Query: 65 VFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGF 124
+ ASGTL ANS +GVY VGDFMT KEELHVVKPTT+VDEA LEILVEKRITGF
Sbjct: 56 IAASGTLMANSVPSGTGVYIVGDFMTRKEELHVVKPTTSVDEA-----LEILVEKRITGF 110
Query: 125 PVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 184
PVIDD+WKLVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNEVQ+LLSKTNGK+V
Sbjct: 111 PVIDDNWKLVGVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVV 170
Query: 185 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 244
GDLMT AP+VVRE T+LED ARLLL+TKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA
Sbjct: 171 GDLMTTAPLVVREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 230
Query: 245 TE 246
E
Sbjct: 231 EE 232
>gi|449525190|ref|XP_004169601.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
Length = 235
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/242 (69%), Positives = 188/242 (77%), Gaps = 23/242 (9%)
Query: 9 SISVARLRAPPAGRTSGRTSFALQL----PCLLLSRPGCRVFSVLATSSDRVSALRRSSA 64
S+S+A RA SF++Q PC RP + A+ + LR+S++
Sbjct: 10 SLSLAPFRA---------KSFSVQEMLFGPC---RRPSLPILH--ASVAQSFPELRKSTS 55
Query: 65 VFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGF 124
+ ASGTL ANS +GVY VGDFMT KEELHVVKPTT+VDEA LEILVEKRITGF
Sbjct: 56 IAASGTLMANSLPSGTGVYIVGDFMTRKEELHVVKPTTSVDEA-----LEILVEKRITGF 110
Query: 125 PVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 184
PVIDD+WKLVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNEVQ+LLSKTNGK+V
Sbjct: 111 PVIDDNWKLVGVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVV 170
Query: 185 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 244
GDLMT AP+VVRE T+LED ARLLL+TKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA
Sbjct: 171 GDLMTTAPLVVREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 230
Query: 245 TE 246
E
Sbjct: 231 EE 232
>gi|15234564|ref|NP_195409.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
gi|75219197|sp|O23193.2|CBSX1_ARATH RecName: Full=CBS domain-containing protein CBSX1, chloroplastic;
AltName: Full=CBS domain-containing protein 2;
Short=AtCDCP2; AltName: Full=Protein LOSS OF THE TIMING
OF ET AND JA BIOSYNTHESIS 2; Short=AtLEJ2; Flags:
Precursor
gi|4006881|emb|CAB16799.1| putative protein [Arabidopsis thaliana]
gi|7270640|emb|CAB80357.1| putative protein [Arabidopsis thaliana]
gi|21537376|gb|AAM61717.1| unknown [Arabidopsis thaliana]
gi|28392900|gb|AAO41886.1| unknown protein [Arabidopsis thaliana]
gi|28827758|gb|AAO50723.1| unknown protein [Arabidopsis thaliana]
gi|332661316|gb|AEE86716.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
Length = 236
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 150/188 (79%), Positives = 166/188 (88%), Gaps = 5/188 (2%)
Query: 62 SSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRI 121
S++ A TL NS++P SGVYTVG+FMT KE+LHVVKPTTTVDEA LE+LVE RI
Sbjct: 54 SASSAAGSTLMTNSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEA-----LELLVENRI 108
Query: 122 TGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNG 181
TGFPVID+DWKLVGLVSDYDLLALDSISGSGR +NSMFPEVDSTWKTFN VQKLLSKTNG
Sbjct: 109 TGFPVIDEDWKLVGLVSDYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNG 168
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
K+VGDLMTPAP+VV E TNLEDAA++LLETKYRRLPVVD+DGKLVGIITRGNVVRAALQI
Sbjct: 169 KLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQI 228
Query: 242 KHATEMGA 249
K + + A
Sbjct: 229 KRSGDRNA 236
>gi|297802232|ref|XP_002869000.1| hypothetical protein ARALYDRAFT_490898 [Arabidopsis lyrata subsp.
lyrata]
gi|297314836|gb|EFH45259.1| hypothetical protein ARALYDRAFT_490898 [Arabidopsis lyrata subsp.
lyrata]
Length = 236
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 166/188 (88%), Gaps = 5/188 (2%)
Query: 62 SSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRI 121
S++ A TL NS++P SGVYTVG+FMT K++LHVVKPTTTVDEA LE+LVE RI
Sbjct: 54 SASSAAGSTLMKNSSSPRSGVYTVGEFMTKKDDLHVVKPTTTVDEA-----LELLVENRI 108
Query: 122 TGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNG 181
TGFPVID+DWKLVGLVSDYDLLALDSISGSGR +NSMFPEVDSTWKTFN VQKLLSKTNG
Sbjct: 109 TGFPVIDEDWKLVGLVSDYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNG 168
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
K+VGDLMTPAP+VV E TNLEDAA++LLETKYRRLPVVD+DGKLVGIITRGNVVRAALQI
Sbjct: 169 KLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQI 228
Query: 242 KHATEMGA 249
K + + A
Sbjct: 229 KRSGDRNA 236
>gi|356541776|ref|XP_003539349.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic
[Glycine max]
gi|255632210|gb|ACU16463.1| unknown [Glycine max]
Length = 228
Score = 299 bits (765), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 145/180 (80%), Positives = 162/180 (90%), Gaps = 5/180 (2%)
Query: 67 ASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPV 126
A+ TLTAN +P SG+YTVGDFMT KE+LHVVKPTT+VDEA LEILVE RITGFPV
Sbjct: 51 AANTLTANDVSPRSGLYTVGDFMTKKEDLHVVKPTTSVDEA-----LEILVENRITGFPV 105
Query: 127 IDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGD 186
IDD+WKLVG+VSDYDLLALDSISG G DN+MFPEVDSTWKTFNEVQKLLSKTNGK++G+
Sbjct: 106 IDDNWKLVGVVSDYDLLALDSISGHGLKDNNMFPEVDSTWKTFNEVQKLLSKTNGKLIGE 165
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
LMT AP+VVRETTNLEDAARLLLETK+RRLPVVDA+G+LVGIITRGNVVRAAL +K A +
Sbjct: 166 LMTTAPMVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALHMKQANQ 225
>gi|356496921|ref|XP_003517313.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Glycine max]
Length = 228
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/213 (72%), Positives = 174/213 (81%), Gaps = 9/213 (4%)
Query: 40 RPGCRVFSVLATSSDRVSA---LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELH 96
RP C + + S R S R S + A+ TLTAN+ +P SG+YTVGDFMT KE+LH
Sbjct: 22 RPLCHPLAASSASFHRSSPPLPRFRFSPLLAANTLTANNISPRSGLYTVGDFMTKKEDLH 81
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
VVKPTT+VDEA LEILVE RITGFPVIDD+WKLVG+VSDYDLLALDSISG G DN
Sbjct: 82 VVKPTTSVDEA-----LEILVENRITGFPVIDDNWKLVGVVSDYDLLALDSISGHGLKDN 136
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
MFPEVDSTWKTFNEVQKLLSKTNGK++G+LMT AP+VVRETTNLEDAARLLLETK+RRL
Sbjct: 137 -MFPEVDSTWKTFNEVQKLLSKTNGKLIGELMTTAPMVVRETTNLEDAARLLLETKFRRL 195
Query: 217 PVVDADGKLVGIITRGNVVRAALQIKHATEMGA 249
PVVDA+G+LVGIITRGNVVRAAL +K A + A
Sbjct: 196 PVVDAEGRLVGIITRGNVVRAALHMKQANQKKA 228
>gi|357482805|ref|XP_003611689.1| Inosine-5'-monophosphate dehydrogenase [Medicago truncatula]
gi|355513024|gb|AES94647.1| Inosine-5'-monophosphate dehydrogenase [Medicago truncatula]
Length = 224
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/189 (77%), Positives = 167/189 (88%), Gaps = 5/189 (2%)
Query: 61 RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKR 120
R S +FA+ TLTANS P +GVYTVGDFMT K+ELH VKPTTTVDEA L+ LVE R
Sbjct: 41 RGSPLFAANTLTANSVPPKNGVYTVGDFMTKKDELHTVKPTTTVDEA-----LDSLVEHR 95
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
ITGFPVIDD+WKLVG+VSDYDLLALDSISG G+ DNS+FP+VDSTWKTFNEVQ+LLSKTN
Sbjct: 96 ITGFPVIDDNWKLVGVVSDYDLLALDSISGQGQTDNSLFPDVDSTWKTFNEVQRLLSKTN 155
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
GK++G+LMT AP+VVRETTNLEDAARLLLETK+RRLPVVDA+G+LVGIITRGNVVRAALQ
Sbjct: 156 GKVIGELMTTAPMVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALQ 215
Query: 241 IKHATEMGA 249
+K ++ A
Sbjct: 216 MKRDSQKKA 224
>gi|217075546|gb|ACJ86133.1| unknown [Medicago truncatula]
gi|388495112|gb|AFK35622.1| unknown [Medicago truncatula]
Length = 224
Score = 296 bits (758), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 145/189 (76%), Positives = 166/189 (87%), Gaps = 5/189 (2%)
Query: 61 RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKR 120
R S +FA+ TLTANS P +GVYTVGDFMT K+ELH VKPTTTVDEA L+ LVE R
Sbjct: 41 RGSPLFAANTLTANSVPPKNGVYTVGDFMTKKDELHTVKPTTTVDEA-----LDSLVEHR 95
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
ITGFPVIDD+WKLVG+VSDYDLLALDSISG G+ DNS+FP+VDSTWKTFNEVQ+L SKTN
Sbjct: 96 ITGFPVIDDNWKLVGVVSDYDLLALDSISGQGQTDNSLFPDVDSTWKTFNEVQRLQSKTN 155
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
GK++G+LMT AP+VVRETTNLEDAARLLLETK+RRLPVVDA+G+LVGIITRGNVVRAALQ
Sbjct: 156 GKVIGELMTTAPMVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALQ 215
Query: 241 IKHATEMGA 249
+K ++ A
Sbjct: 216 MKRDSQKKA 224
>gi|296082380|emb|CBI21385.3| unnamed protein product [Vitis vinifera]
Length = 172
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/174 (85%), Positives = 155/174 (89%), Gaps = 5/174 (2%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWK 132
ANS +GVYTVGDFMT KE+LHVVK TTTV+EA LEILVE RITGFPVIDDDWK
Sbjct: 2 ANSVPSKNGVYTVGDFMTRKEDLHVVKATTTVEEA-----LEILVENRITGFPVIDDDWK 56
Query: 133 LVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP 192
LVGLVSDYDLLALDSISG G D MFPEVDSTWKTFNE+QKLLSKTNGK+VGDLMTPAP
Sbjct: 57 LVGLVSDYDLLALDSISGGGLTDTIMFPEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAP 116
Query: 193 VVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
VVVRETTNLEDAARLLLETKYRRLPVVD+DGKLVGIITRGNVVRAALQIK A E
Sbjct: 117 VVVRETTNLEDAARLLLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRAVE 170
>gi|442570759|pdb|4GQV|A Chain A, Crystal Structure Of Cbs-pair Protein, Cbsx1 From
Arabidopsis Thaliana
Length = 166
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/170 (84%), Positives = 155/170 (91%), Gaps = 5/170 (2%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSD 139
SGVYTVG+FMT KE+LHVVKPTTTVDEA LE+LVE RITGFPVID+DWKLVGLVSD
Sbjct: 2 SGVYTVGEFMTKKEDLHVVKPTTTVDEA-----LELLVENRITGFPVIDEDWKLVGLVSD 56
Query: 140 YDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 199
YDLLALDSISGSGR +NSMFPEVDSTWKTFN VQKLLSKTNGK+VGDLMTPAP+VV E T
Sbjct: 57 YDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKT 116
Query: 200 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 249
NLEDAA++LLETKYRRLPVVD+DGKLVGIITRGNVVRAALQIK + + A
Sbjct: 117 NLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRSGDRNA 166
>gi|343172406|gb|AEL98907.1| cystathionine beta-synthase domain-containing protein, partial
[Silene latifolia]
gi|343172408|gb|AEL98908.1| cystathionine beta-synthase domain-containing protein, partial
[Silene latifolia]
Length = 227
Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 147/199 (73%), Positives = 166/199 (83%), Gaps = 6/199 (3%)
Query: 51 TSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVP 110
+SS ++ +SA S T +S+ +GVYTVGDFMTT+E L VVKPTTTVDEA
Sbjct: 35 SSSSKLRCFSAASAAVNS-TFNGHSSPSKNGVYTVGDFMTTRENLAVVKPTTTVDEA--- 90
Query: 111 TALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 170
LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD+ISG+G + SMFPEVDS+WK FN
Sbjct: 91 --LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDTISGTGLGEASMFPEVDSSWKVFN 148
Query: 171 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
E+QKLLSKTNGK+V D+MT AP+VVRETTNL+DAARLLLETKYRRLPVVDADGKLVGIIT
Sbjct: 149 ELQKLLSKTNGKLVADVMTQAPLVVRETTNLDDAARLLLETKYRRLPVVDADGKLVGIIT 208
Query: 231 RGNVVRAALQIKHATEMGA 249
RGN +RAALQIK A+E A
Sbjct: 209 RGNCIRAALQIKRASEKEA 227
>gi|449445894|ref|XP_004140707.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
gi|449486597|ref|XP_004157343.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
Length = 239
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/194 (73%), Positives = 158/194 (81%), Gaps = 5/194 (2%)
Query: 53 SDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTA 112
SDR A V AS + P G YTVGDFMT KE L+VVKPTTTVDEA
Sbjct: 48 SDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVDEA----- 102
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
LE+LVEKRITGFPV+DDDW LVG+VSDYDLLALDSISG ++D ++FP+VDS+WKTFNE+
Sbjct: 103 LEVLVEKRITGFPVVDDDWNLVGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNEI 162
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
QKLL KTNGK+VGDLMT +P+ VRET+NLEDAARLLLETKYRRLPVVDADGKLVGIITRG
Sbjct: 163 QKLLCKTNGKVVGDLMTSSPLAVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 222
Query: 233 NVVRAALQIKHATE 246
NVVRAALQIK A E
Sbjct: 223 NVVRAALQIKRAAE 236
>gi|34015153|gb|AAQ56349.1| putative CBS domain containing protein [Oryza sativa Japonica
Group]
Length = 190
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/186 (74%), Positives = 158/186 (84%), Gaps = 6/186 (3%)
Query: 62 SSAVFASGTLTANSAAP-SSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKR 120
SS SG + + P +SG+YTVGDFMT +EELHVVK TT+VDEA LE+LVE R
Sbjct: 7 SSPALVSGLMVVRAKNPQNSGIYTVGDFMTKREELHVVKSTTSVDEA-----LEMLVEHR 61
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
ITGFPVIDD+W LVG+VSDYDLLALDSISG+G A+ +FPEVDSTWKTFNE+QKLLSKTN
Sbjct: 62 ITGFPVIDDEWNLVGVVSDYDLLALDSISGNGLAEVDIFPEVDSTWKTFNEIQKLLSKTN 121
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
GK++GD+MT AP+VVRETTNLEDAARLLLETKYRRLPVVD+ GKLVGIITRGNVVRAAL+
Sbjct: 122 GKVIGDVMTSAPLVVRETTNLEDAARLLLETKYRRLPVVDSSGKLVGIITRGNVVRAALK 181
Query: 241 IKHATE 246
IK E
Sbjct: 182 IKKKFE 187
>gi|224096724|ref|XP_002310713.1| predicted protein [Populus trichocarpa]
gi|222853616|gb|EEE91163.1| predicted protein [Populus trichocarpa]
Length = 156
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 139/161 (86%), Positives = 145/161 (90%), Gaps = 5/161 (3%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 148
MT KE+LHVVKPTTTVDEA LE LVE RITGFPVIDDDWKLVGLVSDYDLLALDSI
Sbjct: 1 MTRKEDLHVVKPTTTVDEA-----LEALVEHRITGFPVIDDDWKLVGLVSDYDLLALDSI 55
Query: 149 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 208
SG GR + +MFPEV+STWKTFNEVQ+LLSKTNGK+VGDLMTPAPVVVRETTNLEDAARLL
Sbjct: 56 SGGGRTETNMFPEVESTWKTFNEVQRLLSKTNGKVVGDLMTPAPVVVRETTNLEDAARLL 115
Query: 209 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 249
LETKYRRLPVVDADGKLVGIITRGNVVRAAL IKH E A
Sbjct: 116 LETKYRRLPVVDADGKLVGIITRGNVVRAALHIKHDIERKA 156
>gi|224056130|ref|XP_002298732.1| predicted protein [Populus trichocarpa]
gi|222845990|gb|EEE83537.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 141/189 (74%), Positives = 156/189 (82%), Gaps = 6/189 (3%)
Query: 61 RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKR 120
RSS A T+ ANS SG+YTVGDFMT KE L+VVK TTVDEA LE LVEKR
Sbjct: 54 RSSVAVALSTV-ANSVPARSGIYTVGDFMTKKEGLYVVKANTTVDEA-----LEALVEKR 107
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
ITGFPVIDDDW+LVG+VSDYDLLALDSISG + D ++FP VDS+WKTFNE+QKLL K N
Sbjct: 108 ITGFPVIDDDWRLVGVVSDYDLLALDSISGGCQNDTNLFPNVDSSWKTFNELQKLLIKNN 167
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
GK+VGDLMTP P+VV ETTNLEDA RLLLETKYRRLPVVD DGKLVGIITRG++VRAALQ
Sbjct: 168 GKLVGDLMTPNPLVVYETTNLEDAVRLLLETKYRRLPVVDDDGKLVGIITRGDIVRAALQ 227
Query: 241 IKHATEMGA 249
IK+ATE A
Sbjct: 228 IKNATERSA 236
>gi|388522595|gb|AFK49359.1| unknown [Lotus japonicus]
Length = 222
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/176 (76%), Positives = 154/176 (87%), Gaps = 5/176 (2%)
Query: 74 NSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKL 133
NS P +GVYTVGDFMT +E+LHVVKPTTTVDEA LE+LVE R+TGFPVIDD W L
Sbjct: 52 NSVPPKNGVYTVGDFMTKREDLHVVKPTTTVDEA-----LEMLVEHRVTGFPVIDDKWNL 106
Query: 134 VGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 193
V +VSDYDLLALDSISG+GR ++SMFPEVDS+WKTFNEVQ LLSKTNGK++G+LMT AP+
Sbjct: 107 VCVVSDYDLLALDSISGNGRKESSMFPEVDSSWKTFNEVQNLLSKTNGKVIGELMTTAPM 166
Query: 194 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 249
VVRE TNLEDAARLLLETK+RRLPVVD++G+LVGIITRGNVV AALQIK A + A
Sbjct: 167 VVRENTNLEDAARLLLETKFRRLPVVDSEGRLVGIITRGNVVGAALQIKRAIQNKA 222
>gi|115475836|ref|NP_001061514.1| Os08g0313200 [Oryza sativa Japonica Group]
gi|50508236|dbj|BAD31758.1| putative CBS domain containing protein [Oryza sativa Japonica
Group]
gi|113623483|dbj|BAF23428.1| Os08g0313200 [Oryza sativa Japonica Group]
gi|215768507|dbj|BAH00736.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194170|gb|EEC76597.1| hypothetical protein OsI_14449 [Oryza sativa Indica Group]
gi|222640324|gb|EEE68456.1| hypothetical protein OsJ_26849 [Oryza sativa Japonica Group]
gi|258644543|dbj|BAI39797.1| CBS domain-containing protein -like [Oryza sativa Indica Group]
gi|258644675|dbj|BAI39922.1| CBS domain-containing protein -like [Oryza sativa Indica Group]
Length = 235
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/174 (78%), Positives = 154/174 (88%), Gaps = 5/174 (2%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWK 132
A+ A +SG+YTVGDFMT +EELHVVK TT+VDEA LE+LVE RITGFPVIDD+W
Sbjct: 64 ASVAGQNSGIYTVGDFMTKREELHVVKSTTSVDEA-----LEMLVEHRITGFPVIDDEWN 118
Query: 133 LVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP 192
LVG+VSDYDLLALDSISG+G A+ +FPEVDSTWKTFNE+QKLLSKTNGK++GD+MT AP
Sbjct: 119 LVGVVSDYDLLALDSISGNGLAEVDIFPEVDSTWKTFNEIQKLLSKTNGKVIGDVMTSAP 178
Query: 193 VVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
+VVRETTNLEDAARLLLETKYRRLPVVD+ GKLVGIITRGNVVRAAL+IK E
Sbjct: 179 LVVRETTNLEDAARLLLETKYRRLPVVDSSGKLVGIITRGNVVRAALKIKKKFE 232
>gi|313235700|emb|CBY11152.1| unnamed protein product [Oikopleura dioica]
Length = 158
Score = 272 bits (696), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 133/135 (98%), Positives = 133/135 (98%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 175
L EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL
Sbjct: 24 LYEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 83
Query: 176 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV
Sbjct: 84 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 143
Query: 236 RAALQIKHATEMGAQ 250
RAAL IKHATEMGAQ
Sbjct: 144 RAALSIKHATEMGAQ 158
>gi|225428867|ref|XP_002285148.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic
[Vitis vinifera]
gi|297741249|emb|CBI32380.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/189 (72%), Positives = 154/189 (81%), Gaps = 8/189 (4%)
Query: 58 ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILV 117
ALRR A +T NS +G Y VGDFMT KE LHVVKPTT VDEA LE LV
Sbjct: 47 ALRRRPA---HAAITTNSVPHRNGTYRVGDFMTKKEHLHVVKPTTPVDEA-----LEALV 98
Query: 118 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS 177
EK+ITGFPVID+DWKLVGLVSDYDLLALDSISG + D ++FP+VDS+WK FN++QKLL+
Sbjct: 99 EKKITGFPVIDEDWKLVGLVSDYDLLALDSISGGAQIDTTLFPDVDSSWKAFNQIQKLLA 158
Query: 178 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
KT GK+VGD+MTPAPVVV ETTNLEDAARLLLETKYRRLPVVD DGKLVGI+TRG+VVRA
Sbjct: 159 KTKGKVVGDVMTPAPVVVHETTNLEDAARLLLETKYRRLPVVDGDGKLVGIVTRGSVVRA 218
Query: 238 ALQIKHATE 246
AL+IK E
Sbjct: 219 ALKIKGTRE 227
>gi|297802578|ref|XP_002869173.1| hypothetical protein ARALYDRAFT_491262 [Arabidopsis lyrata subsp.
lyrata]
gi|297315009|gb|EFH45432.1| hypothetical protein ARALYDRAFT_491262 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/185 (70%), Positives = 160/185 (86%), Gaps = 6/185 (3%)
Query: 63 SAVFASGTLTANSAAPS-SGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRI 121
SA FA+ N++ P+ +G YTVGDFMT ++ LHVVKP+T+VD+A LE+LVEK++
Sbjct: 55 SAFFAAPASVNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDA-----LELLVEKKV 109
Query: 122 TGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNG 181
TG PVIDD+W LVG+VSDYDLLALDSISG + D ++FP+VDSTWKTFNE+QKL+SKT G
Sbjct: 110 TGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYG 169
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
K+VGDLMTP+P+VVR++TNLEDAARLLLETK+RRLPVVDADGKL+GI+TRGNVVRAALQI
Sbjct: 170 KVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQI 229
Query: 242 KHATE 246
K TE
Sbjct: 230 KRETE 234
>gi|18418376|ref|NP_567952.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
gi|75268156|sp|Q9C5D0.1|CBSX2_ARATH RecName: Full=CBS domain-containing protein CBSX2, chloroplastic;
AltName: Full=CBS domain-containing protein 1;
Short=AtCDCP1; AltName: Full=Protein LOSS OF THE TIMING
OF ET AND JA BIOSYNTHESIS 1; Short=AtLEJ1; Flags:
Precursor
gi|13430838|gb|AAK26041.1|AF360331_1 unknown protein [Arabidopsis thaliana]
gi|15810601|gb|AAL07188.1| unknown protein [Arabidopsis thaliana]
gi|332660926|gb|AEE86326.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
Length = 238
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 136/198 (68%), Positives = 163/198 (82%), Gaps = 16/198 (8%)
Query: 60 RRSSAVFASGTLTANSAAPSS-----------GVYTVGDFMTTKEELHVVKPTTTVDEAF 108
RRSS S T++A AAP+S G YTVGDFMT ++ LHVVKP+T+VD+A
Sbjct: 43 RRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDA- 101
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
LE+LVEK++TG PVIDD+W LVG+VSDYDLLALDSISG + D ++FP+VDSTWKT
Sbjct: 102 ----LELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKT 157
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
FNE+QKL+SKT GK+VGDLMTP+P+VVR++TNLEDAARLLLETK+RRLPVVDADGKL+GI
Sbjct: 158 FNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGI 217
Query: 229 ITRGNVVRAALQIKHATE 246
+TRGNVVRAALQIK TE
Sbjct: 218 LTRGNVVRAALQIKRETE 235
>gi|255555395|ref|XP_002518734.1| conserved hypothetical protein [Ricinus communis]
gi|223542115|gb|EEF43659.1| conserved hypothetical protein [Ricinus communis]
Length = 220
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/192 (68%), Positives = 159/192 (82%), Gaps = 6/192 (3%)
Query: 55 RVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALE 114
R SALR ++ TLT N+ P +G+YTVGDFMT KE+L+VVK TTVDEA LE
Sbjct: 34 RRSALRSRTSAINFSTLT-NNGLPRNGMYTVGDFMTRKEDLYVVKTMTTVDEA-----LE 87
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
+VEK+I+GFPV+DD+WKLVG+VSDYDLLAL+SISG ++ ++FP+ DS+WKTFNE+QK
Sbjct: 88 AMVEKKISGFPVVDDNWKLVGVVSDYDLLALNSISGRNQSGTNLFPDTDSSWKTFNEMQK 147
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
LL+K NGK+VGDLMTPAP+VV ETTNLEDAARLLL+TKY RLPVVD DGKLVG+I R NV
Sbjct: 148 LLTKNNGKVVGDLMTPAPLVVNETTNLEDAARLLLDTKYHRLPVVDGDGKLVGMIARENV 207
Query: 235 VRAALQIKHATE 246
VRAALQIK A++
Sbjct: 208 VRAALQIKRASQ 219
>gi|326488002|dbj|BAJ89840.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512290|dbj|BAJ96126.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 230
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/192 (70%), Positives = 155/192 (80%), Gaps = 7/192 (3%)
Query: 57 SALRRSSAVFASGTLTANSAA--PSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALE 114
S++R S+A A G L +++ + G YTVGDFMT +E LHVVKP+T+VDEA LE
Sbjct: 41 SSIRASAATAARGNLPHHTSVVVEAGGAYTVGDFMTKREHLHVVKPSTSVDEA-----LE 95
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
LVE RITGFPV DD W LVG+VSDYDLLALDSISG+G+A+ +FPEVDSTWKTF E+QK
Sbjct: 96 RLVEHRITGFPVTDDHWNLVGVVSDYDLLALDSISGNGQAEPDIFPEVDSTWKTFREIQK 155
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
LLSKTNGK+V D+MT AP+VVRETTNLEDAARLLL TKYRRLPVVD GKLVGIITRGNV
Sbjct: 156 LLSKTNGKVVSDVMTSAPLVVRETTNLEDAARLLLVTKYRRLPVVDGSGKLVGIITRGNV 215
Query: 235 VRAALQIKHATE 246
VRAAL+ K E
Sbjct: 216 VRAALEFKKNVE 227
>gi|147839911|emb|CAN65905.1| hypothetical protein VITISV_004872 [Vitis vinifera]
Length = 298
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/173 (75%), Positives = 147/173 (84%), Gaps = 5/173 (2%)
Query: 74 NSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKL 133
N+ +G Y VGDFMT KE LHVVKPTT VDEA LE LVEK+ITGFPVID+DWKL
Sbjct: 128 NACHHRNGTYRVGDFMTKKEHLHVVKPTTPVDEA-----LEALVEKKITGFPVIDEDWKL 182
Query: 134 VGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 193
VGLVSDYDLLALDSISG + D ++FP+VDS+WK FN++QKLL+KT GK+VGD+MTPAPV
Sbjct: 183 VGLVSDYDLLALDSISGGAQIDTTLFPDVDSSWKAFNQIQKLLAKTKGKVVGDVMTPAPV 242
Query: 194 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
VV ETTNLEDAARLLLETKYRRLPVVD DGKLVGI+TRG+VVRAAL+IK E
Sbjct: 243 VVHETTNLEDAARLLLETKYRRLPVVDGDGKLVGIVTRGSVVRAALKIKGTRE 295
>gi|195619856|gb|ACG31758.1| IMP dehydrogenase [Zea mays]
gi|195637366|gb|ACG38151.1| IMP dehydrogenase [Zea mays]
gi|413922004|gb|AFW61936.1| IMP dehydrogenase [Zea mays]
Length = 232
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/174 (74%), Positives = 151/174 (86%), Gaps = 5/174 (2%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWK 132
A+ A S+G Y VGD MT +EELHVVKPTT+VD+A LE+LV+ RI+GFPVIDDDW
Sbjct: 61 ASVAGQSTGSYRVGDVMTKREELHVVKPTTSVDDA-----LEMLVKHRISGFPVIDDDWN 115
Query: 133 LVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP 192
LVG+VSDYDLLALD+ISG+G A+ +FPEVDSTWKTF+E+QKLLSKTNGK++ D+MTPAP
Sbjct: 116 LVGVVSDYDLLALDTISGAGPAEADIFPEVDSTWKTFHEIQKLLSKTNGKVIADVMTPAP 175
Query: 193 VVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
+VVRETTNLEDAARLLL TKYRRLPVVD+ GKLVGIITRGNVV+AAL+IK E
Sbjct: 176 LVVRETTNLEDAARLLLVTKYRRLPVVDSSGKLVGIITRGNVVQAALEIKKKVE 229
>gi|357145579|ref|XP_003573692.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Brachypodium distachyon]
Length = 233
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/171 (76%), Positives = 146/171 (85%), Gaps = 5/171 (2%)
Query: 76 AAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVG 135
A +S YTVGDFMT +EELHVVKPTT+VDEA LE LVE RITGFPVIDDDW LVG
Sbjct: 65 AGETSRTYTVGDFMTKREELHVVKPTTSVDEA-----LERLVEHRITGFPVIDDDWNLVG 119
Query: 136 LVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV 195
+VSDYDLLALDSISG+G A+ +FPEVDSTWKTF E+QKLLSKTNG+++ D+MT +P+VV
Sbjct: 120 VVSDYDLLALDSISGNGMAEGDIFPEVDSTWKTFREIQKLLSKTNGQVISDVMTSSPLVV 179
Query: 196 RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
RETTNLEDAARLLL TKYRRLPVVD+ GKLVGIITRGNVVRAAL+ K E
Sbjct: 180 RETTNLEDAARLLLVTKYRRLPVVDSSGKLVGIITRGNVVRAALEFKKKVE 230
>gi|357150779|ref|XP_003575573.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Brachypodium distachyon]
Length = 230
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 149/172 (86%), Gaps = 7/172 (4%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSD 139
+GVYTVGDFMT K+ LHVVKP+T+VDEA LE+LV+ RI+GFPVIDD+WKLVG+VSD
Sbjct: 64 NGVYTVGDFMTKKDNLHVVKPSTSVDEA-----LEMLVQHRISGFPVIDDNWKLVGVVSD 118
Query: 140 YDLLALDSISGSGRADN--SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 197
YDLLALDS++G G AD SMFPEVDSTWKTF E+Q+LLSKTNGK++ D+MTP P+VVRE
Sbjct: 119 YDLLALDSMAGCGLADKNTSMFPEVDSTWKTFREIQRLLSKTNGKVISDVMTPTPLVVRE 178
Query: 198 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 249
TTNL+ AARLLLETKY RLPVV++ GKLVG+ITRGNVVRAAL+IK E GA
Sbjct: 179 TTNLDAAARLLLETKYHRLPVVNSTGKLVGMITRGNVVRAALKIKKKAEEGA 230
>gi|226529195|ref|NP_001149160.1| LOC100282782 [Zea mays]
gi|195625176|gb|ACG34418.1| IMP dehydrogenase [Zea mays]
Length = 232
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/174 (73%), Positives = 150/174 (86%), Gaps = 5/174 (2%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWK 132
A+ A S+G Y VGD MT +EELHVVKPTT+VD+A LE+LV+ RI+GFPVIDDDW
Sbjct: 61 ASVAGQSTGSYRVGDVMTKREELHVVKPTTSVDDA-----LEMLVKHRISGFPVIDDDWN 115
Query: 133 LVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP 192
LVG+VSDYDLLALD+ISG+G A+ +FPEVDST KTF+E+QKLLSKTNGK++ D+MTPAP
Sbjct: 116 LVGVVSDYDLLALDTISGAGPAEADIFPEVDSTSKTFHEIQKLLSKTNGKVIADVMTPAP 175
Query: 193 VVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
+VVRETTNLEDAARLLL TKYRRLPVVD+ GKLVGIITRGNVV+AAL+IK E
Sbjct: 176 LVVRETTNLEDAARLLLVTKYRRLPVVDSSGKLVGIITRGNVVQAALEIKKKVE 229
>gi|413922005|gb|AFW61937.1| hypothetical protein ZEAMMB73_004773 [Zea mays]
Length = 260
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/197 (65%), Positives = 151/197 (76%), Gaps = 23/197 (11%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEA-----------------------FV 109
A+ A S+G Y VGD MT +EELHVVKPTT+VD+
Sbjct: 61 ASVAGQSTGSYRVGDVMTKREELHVVKPTTSVDDGALFLICCTCLPYFRSVERDHSILLF 120
Query: 110 PTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF 169
ALE+LV+ RI+GFPVIDDDW LVG+VSDYDLLALD+ISG+G A+ +FPEVDSTWKTF
Sbjct: 121 FAALEMLVKHRISGFPVIDDDWNLVGVVSDYDLLALDTISGAGPAEADIFPEVDSTWKTF 180
Query: 170 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
+E+QKLLSKTNGK++ D+MTPAP+VVRETTNLEDAARLLL TKYRRLPVVD+ GKLVGII
Sbjct: 181 HEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAARLLLVTKYRRLPVVDSSGKLVGII 240
Query: 230 TRGNVVRAALQIKHATE 246
TRGNVV+AAL+IK E
Sbjct: 241 TRGNVVQAALEIKKKVE 257
>gi|356499765|ref|XP_003518707.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Glycine max]
Length = 225
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 156/198 (78%), Gaps = 8/198 (4%)
Query: 52 SSDRVSALRR---SSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAF 108
SS V RR SS + + T NS ++G YTV DFMT K++LHVVK TTTVDEA
Sbjct: 32 SSSAVPKRRRFSNSSGFRLASSQTVNSVPRANGTYTVSDFMTKKQDLHVVKTTTTVDEA- 90
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
LE LV RI+G PVID+DW LVG+VSDYDLLA+DSISG ++D ++FP+VDSTWKT
Sbjct: 91 ----LEALVNNRISGLPVIDEDWNLVGVVSDYDLLAIDSISGGPQSDANLFPDVDSTWKT 146
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
FNE+QKLLSKTNG++VGDLMTP P+VV E+T+LE+AARLLLETKYRRLPVVD DGKLVG+
Sbjct: 147 FNELQKLLSKTNGQVVGDLMTPTPLVVHESTSLEEAARLLLETKYRRLPVVDDDGKLVGL 206
Query: 229 ITRGNVVRAALQIKHATE 246
ITRGN+V+AAL K A E
Sbjct: 207 ITRGNIVKAALLSKRAGE 224
>gi|356624493|pdb|3SL7|A Chain A, Crystal Structure Of Cbs-Pair Protein, Cbsx2 From
Arabidopsis Thaliana
gi|356624494|pdb|3SL7|B Chain B, Crystal Structure Of Cbs-Pair Protein, Cbsx2 From
Arabidopsis Thaliana
Length = 180
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/164 (73%), Positives = 145/164 (88%), Gaps = 5/164 (3%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
YTVGDF T ++ LHVVKP+T+VD+A LE+LVEK++TG PVIDD+W LVG+VSDYDL
Sbjct: 4 YTVGDFXTPRQNLHVVKPSTSVDDA-----LELLVEKKVTGLPVIDDNWTLVGVVSDYDL 58
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
LALDSISG + D ++FP+VDSTWKTFNE+QKL+SKT GK+VGDL TP+P+VVR++TNLE
Sbjct: 59 LALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLXTPSPLVVRDSTNLE 118
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
DAARLLLETK+RRLPVVDADGKL+GI+TRGNVVRAALQIK +
Sbjct: 119 DAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRNAD 162
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 94 ELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--AL------ 145
+L P D + A +L+E + PV+D D KL+G+++ +++ AL
Sbjct: 102 DLXTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRNA 161
Query: 146 DSISGSGRADNSMFPEVDS 164
DSISG + D ++FP+VDS
Sbjct: 162 DSISGRSQNDTNLFPDVDS 180
>gi|442570760|pdb|4GQW|A Chain A, Crystal Structure Of Cbs-pair Protein, Cbsx1 (loop
Deletion) From Arabidopsis Thaliana
Length = 152
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/170 (76%), Positives = 141/170 (82%), Gaps = 19/170 (11%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSD 139
SGVYTVG+FMT KE+LHVVKPTTTVDEA LE+LVE RITGFPVID+DWKLVGLVSD
Sbjct: 2 SGVYTVGEFMTKKEDLHVVKPTTTVDEA-----LELLVENRITGFPVIDEDWKLVGLVSD 56
Query: 140 YDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 199
YDLLALDS DSTWKTFN VQKLLSKTNGK+VGDLMTPAP+VV E T
Sbjct: 57 YDLLALDS--------------GDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKT 102
Query: 200 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 249
NLEDAA++LLETKYRRLPVVD+DGKLVGIITRGNVVRAALQIK + + A
Sbjct: 103 NLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRSGDRNA 152
>gi|388507816|gb|AFK41974.1| unknown [Medicago truncatula]
Length = 221
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 147/175 (84%), Gaps = 7/175 (4%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDW 131
T NS ++G YTV DFMT K LHVVK TT+VDEA LE LV+ RI+G PVID++W
Sbjct: 51 TVNSVPRANGTYTVSDFMTKKHNLHVVKTTTSVDEA-----LEALVKNRISGLPVIDEEW 105
Query: 132 KLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPA 191
LVG+VSDYDLLA+D+ISGS +D S+FP+VDSTWKTFNE+QKLLSKTNGK+VGDLMTP+
Sbjct: 106 NLVGVVSDYDLLAIDTISGS--SDASLFPDVDSTWKTFNEIQKLLSKTNGKVVGDLMTPS 163
Query: 192 PVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
P+VV E+T+LEDAARLLLETKYRRLPVVD DGKLVG+ITRGN+V+AAL K + E
Sbjct: 164 PLVVHESTSLEDAARLLLETKYRRLPVVDKDGKLVGLITRGNIVKAALLSKRSGE 218
>gi|294462367|gb|ADE76732.1| unknown [Picea sitchensis]
Length = 252
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 122/175 (69%), Positives = 143/175 (81%), Gaps = 5/175 (2%)
Query: 70 TLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDD 129
TL A P V+TVGDFMT KE L VVKPTT VDEA +E LV RITG PV+D+
Sbjct: 82 TLMATDVPPKHEVFTVGDFMTRKENLIVVKPTTMVDEA-----MESLVANRITGLPVVDN 136
Query: 130 DWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMT 189
DWKLVG+VSDYDLLALDSISG+GR + FP+V STWK FNE+Q LL+KTNGK+V ++MT
Sbjct: 137 DWKLVGVVSDYDLLALDSISGAGRTETGFFPQVGSTWKAFNELQNLLNKTNGKIVAEVMT 196
Query: 190 PAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 244
P+P+V+RETTNLEDAARLLLETKYRRLPVVD GKLVGI+TRGNV++AAL++K A
Sbjct: 197 PSPLVIRETTNLEDAARLLLETKYRRLPVVDNSGKLVGILTRGNVIKAALKMKRA 251
>gi|224103629|ref|XP_002313129.1| predicted protein [Populus trichocarpa]
gi|222849537|gb|EEE87084.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/166 (74%), Positives = 141/166 (84%), Gaps = 6/166 (3%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYD 141
++TVGDFMT +E+LHV K TTVDEA LE LVEKRITGFPVIDD+WKLVG+VSDYD
Sbjct: 1 IHTVGDFMTKREDLHVFKANTTVDEA-----LEALVEKRITGFPVIDDNWKLVGVVSDYD 55
Query: 142 LLALDSISGSG-RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
LL L SISGS + D ++FP VDS+WKTFNE+QKLL K NGK+VGDLMTP P+VV ETTN
Sbjct: 56 LLVLGSISGSSCQNDTNLFPNVDSSWKTFNELQKLLIKNNGKVVGDLMTPNPLVVYETTN 115
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
LEDA RLLLETKYRRLPVVD DGKLVGIITRG++VRA+ QIK +TE
Sbjct: 116 LEDAVRLLLETKYRRLPVVDNDGKLVGIITRGDIVRASQQIKSSTE 161
>gi|238008544|gb|ACR35307.1| unknown [Zea mays]
gi|413922006|gb|AFW61938.1| hypothetical protein ZEAMMB73_004773 [Zea mays]
Length = 156
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/158 (76%), Positives = 141/158 (89%), Gaps = 5/158 (3%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 148
MT +EELHVVKPTT+VD+A LE+LV+ RI+GFPVIDDDW LVG+VSDYDLLALD+I
Sbjct: 1 MTKREELHVVKPTTSVDDA-----LEMLVKHRISGFPVIDDDWNLVGVVSDYDLLALDTI 55
Query: 149 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 208
SG+G A+ +FPEVDSTWKTF+E+QKLLSKTNGK++ D+MTPAP+VVRETTNLEDAARLL
Sbjct: 56 SGAGPAEADIFPEVDSTWKTFHEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAARLL 115
Query: 209 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
L TKYRRLPVVD+ GKLVGIITRGNVV+AAL+IK E
Sbjct: 116 LVTKYRRLPVVDSSGKLVGIITRGNVVQAALEIKKKVE 153
>gi|363808222|ref|NP_001242233.1| uncharacterized protein LOC100781400 [Glycine max]
gi|255647096|gb|ACU24016.1| unknown [Glycine max]
Length = 222
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/183 (67%), Positives = 146/183 (79%), Gaps = 5/183 (2%)
Query: 62 SSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRI 121
SS + + T NS +G YTV DF T K++LHVVK TTTVDEA LE LV RI
Sbjct: 44 SSGFRLASSQTVNSVPRGNGTYTVADFATKKQDLHVVKTTTTVDEA-----LEALVNYRI 98
Query: 122 TGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNG 181
+G PVID+ W LVG+VSDYDLLA+DSISG ++D ++FP VDSTWKTFNE+QKLLSKTNG
Sbjct: 99 SGLPVIDEVWNLVGVVSDYDLLAIDSISGGPQSDANLFPNVDSTWKTFNELQKLLSKTNG 158
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
++VGDLMTP P+VV E+T+LE+AARLLLETKYRRLPVVD DGKLVG+ITRGN+V+AAL
Sbjct: 159 QVVGDLMTPTPLVVHESTSLEEAARLLLETKYRRLPVVDDDGKLVGLITRGNIVKAALLS 218
Query: 242 KHA 244
K A
Sbjct: 219 KRA 221
>gi|226506150|ref|NP_001147441.1| cystathionin beta synthase protein [Zea mays]
gi|195611422|gb|ACG27541.1| cystathionin beta synthase protein [Zea mays]
Length = 227
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/169 (70%), Positives = 144/169 (85%), Gaps = 7/169 (4%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
YTVGDFMTT++ LHVV+PTT VD+A LE+LV+ RI+GFPV+DDDW LVG+VSDYDL
Sbjct: 64 YTVGDFMTTRDNLHVVQPTTPVDQA-----LELLVQHRISGFPVVDDDWNLVGVVSDYDL 118
Query: 143 LALDSISGSGRADNS--MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
LALDS+SG+ AD S MFP+VDSTWKTF+E+Q++LSKTNGK++GD+MT +P+ VR TN
Sbjct: 119 LALDSMSGNELADTSTNMFPDVDSTWKTFHELQRILSKTNGKVIGDVMTSSPLAVRINTN 178
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 249
L+ A RLLLETKYRRLPVVD+ GKLVG+ITRGNVV AAL+IK TE GA
Sbjct: 179 LDAATRLLLETKYRRLPVVDSMGKLVGMITRGNVVSAALKIKKKTEEGA 227
>gi|414587994|tpg|DAA38565.1| TPA: cystathionin beta synthase protein [Zea mays]
Length = 227
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/169 (69%), Positives = 143/169 (84%), Gaps = 7/169 (4%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
YTVGDFMT ++ LHVV+PTT VD+A LE+LV+ RI+GFPV+DDDW LVG+VSDYDL
Sbjct: 64 YTVGDFMTRRDNLHVVQPTTPVDQA-----LELLVQHRISGFPVVDDDWNLVGVVSDYDL 118
Query: 143 LALDSISGSGRADNS--MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
LALDS+SG+ AD S MFP+VDSTWKTF+E+Q++LSKTNGK++GD+MT +P+ VR TN
Sbjct: 119 LALDSMSGNELADTSTNMFPDVDSTWKTFHELQRILSKTNGKVIGDVMTSSPLAVRINTN 178
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 249
L+ A RLLLETKYRRLPVVD+ GKLVG+ITRGNVV AAL+IK TE GA
Sbjct: 179 LDAATRLLLETKYRRLPVVDSMGKLVGMITRGNVVSAALKIKKKTEEGA 227
>gi|413922007|gb|AFW61939.1| hypothetical protein ZEAMMB73_004773 [Zea mays]
Length = 184
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 121/181 (66%), Positives = 141/181 (77%), Gaps = 23/181 (12%)
Query: 89 MTTKEELHVVKPTTTVDEA-----------------------FVPTALEILVEKRITGFP 125
MT +EELHVVKPTT+VD+ ALE+LV+ RI+GFP
Sbjct: 1 MTKREELHVVKPTTSVDDGALFLICCTCLPYFRSVERDHSILLFFAALEMLVKHRISGFP 60
Query: 126 VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 185
VIDDDW LVG+VSDYDLLALD+ISG+G A+ +FPEVDSTWKTF+E+QKLLSKTNGK++
Sbjct: 61 VIDDDWNLVGVVSDYDLLALDTISGAGPAEADIFPEVDSTWKTFHEIQKLLSKTNGKVIA 120
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
D+MTPAP+VVRETTNLEDAARLLL TKYRRLPVVD+ GKLVGIITRGNVV+AAL+IK
Sbjct: 121 DVMTPAPLVVRETTNLEDAARLLLVTKYRRLPVVDSSGKLVGIITRGNVVQAALEIKKKV 180
Query: 246 E 246
E
Sbjct: 181 E 181
>gi|115477978|ref|NP_001062584.1| Os09g0115500 [Oryza sativa Japonica Group]
gi|46389988|dbj|BAD16230.1| CBS domain containing protein-like [Oryza sativa Japonica Group]
gi|113630817|dbj|BAF24498.1| Os09g0115500 [Oryza sativa Japonica Group]
gi|215686955|dbj|BAG89764.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692644|dbj|BAG88064.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201664|gb|EEC84091.1| hypothetical protein OsI_30399 [Oryza sativa Indica Group]
gi|222641067|gb|EEE69199.1| hypothetical protein OsJ_28393 [Oryza sativa Japonica Group]
Length = 227
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/170 (69%), Positives = 140/170 (82%), Gaps = 7/170 (4%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVS 138
++GVYTVGDFMT + LHVV P T+VDEA LE LV+ +I+GFPV+DD KLVG+VS
Sbjct: 60 NNGVYTVGDFMTKRPNLHVVTPATSVDEA-----LETLVQHKISGFPVVDDTGKLVGVVS 114
Query: 139 DYDLLALDSISGSG--RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 196
DYDLLALDSISGSG + SMFPEVDSTWKTF E+Q+LLSKTNGK++ D+MT +P+ VR
Sbjct: 115 DYDLLALDSISGSGLTGTNTSMFPEVDSTWKTFREIQRLLSKTNGKVIADVMTYSPLAVR 174
Query: 197 ETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
E+TNL+ A RLLLETKYRRLPVVD+ GKLVG+ITRG VVRAAL+IK E
Sbjct: 175 ESTNLDAATRLLLETKYRRLPVVDSTGKLVGMITRGTVVRAALKIKKTAE 224
>gi|171452350|dbj|BAG15866.1| hypothetical protein [Bruguiera gymnorhiza]
Length = 237
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 142/186 (76%), Gaps = 7/186 (3%)
Query: 61 RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKR 120
RSS F+ T AP Y VG+FM KE+L V+K TTTVDEA V LVE
Sbjct: 56 RSS--FSPAFSTNPVPAPREQTYKVGNFMIKKEDLLVLKTTTTVDEALV-----ALVEDS 108
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
+TGFPVIDDDWKLVG+VSDYD+LA+DSISG + D ++FP+VD +WKTFNE++K+L KT+
Sbjct: 109 VTGFPVIDDDWKLVGVVSDYDILAIDSISGCSQIDRNVFPDVDLSWKTFNELRKILMKTH 168
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
GK+VGDLMTP P+VV ETT++E ARLLL+TKY RLPVVD+D KLVG+I R +VV+AAL
Sbjct: 169 GKVVGDLMTPNPLVVHETTDIETVARLLLDTKYHRLPVVDSDDKLVGVIAREDVVKAALL 228
Query: 241 IKHATE 246
IK A+E
Sbjct: 229 IKRASE 234
>gi|168027670|ref|XP_001766352.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682261|gb|EDQ68680.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 260
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/187 (62%), Positives = 136/187 (72%), Gaps = 5/187 (2%)
Query: 60 RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEK 119
R SS T+T N YTVGD+MT EL+ TT+DEA LE+LVEK
Sbjct: 62 RGSSFPLPRSTMTENPTPQKQETYTVGDYMTPVSELYCATVNTTIDEA-----LEVLVEK 116
Query: 120 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 179
RITG PVIDD LVG+VSDYDLLALDSISG + + S+FPE TWK F E+QKLL KT
Sbjct: 117 RITGMPVIDDFGALVGVVSDYDLLALDSISGQRQPETSLFPEAGRTWKAFKEIQKLLIKT 176
Query: 180 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
NGK VGD+MTP+P+VV E TNLEDAAR+LL+TK+RRLPVV DGKLVG++TRGNVVRAAL
Sbjct: 177 NGKTVGDVMTPSPLVVSEQTNLEDAARVLLDTKFRRLPVVGDDGKLVGLLTRGNVVRAAL 236
Query: 240 QIKHATE 246
+K A E
Sbjct: 237 VMKRAAE 243
>gi|449438390|ref|XP_004136971.1| PREDICTED: CBS domain-containing protein CBSX2, chloroplastic-like
[Cucumis sativus]
Length = 215
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/202 (57%), Positives = 149/202 (73%), Gaps = 7/202 (3%)
Query: 47 SVLATSSDRVSALRRSSAVFA-SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVD 105
S L T+ R + R A SG ++S +G Y VGDFMT K L V+KP+T+V+
Sbjct: 16 SRLPTTQLRHAGYRSPVVALAFSGHRVSSSIPFRNGSYAVGDFMTKKGNLQVLKPSTSVE 75
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN-SMFPEVDS 164
EA LE+LVEK ++GFPV+DDDWKLVG+VSDYDLLALDSISG G D ++FP+V+
Sbjct: 76 EA-----LEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGDIINIFPDVNC 130
Query: 165 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 224
+W++F +QKLLSK NG++VGDLMTPAP+VV ET N E+AARLLLETK+ RLPVVD +GK
Sbjct: 131 SWESFKLIQKLLSKKNGEVVGDLMTPAPLVVSETMNFENAARLLLETKFHRLPVVDCEGK 190
Query: 225 LVGIITRGNVVRAALQIKHATE 246
LVGIITR ++VR L++K E
Sbjct: 191 LVGIITREDIVRVGLEMKRTQE 212
>gi|168039489|ref|XP_001772230.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676561|gb|EDQ63043.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 175
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/164 (68%), Positives = 131/164 (79%), Gaps = 5/164 (3%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
YTVGD+MT +L+ TT+DEA LE+LVEKRITG PVIDD LVG+VSDYDL
Sbjct: 1 YTVGDYMTPVSDLYCATVNTTIDEA-----LEVLVEKRITGMPVIDDAGALVGVVSDYDL 55
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
LALDSISG + + S+FPE TWK F E+QKLL KTNGKMVGD+MTP+P+VVRE TNLE
Sbjct: 56 LALDSISGQRQPETSLFPEAGRTWKAFREIQKLLVKTNGKMVGDVMTPSPLVVREHTNLE 115
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
DAAR+LL+TK+RRLPVV DGKLVG++TRGNVVRAAL +K A E
Sbjct: 116 DAARVLLDTKFRRLPVVGDDGKLVGLLTRGNVVRAALIMKRAAE 159
>gi|302762132|ref|XP_002964488.1| hypothetical protein SELMODRAFT_81478 [Selaginella moellendorffii]
gi|302820740|ref|XP_002992036.1| hypothetical protein SELMODRAFT_134636 [Selaginella moellendorffii]
gi|300140158|gb|EFJ06885.1| hypothetical protein SELMODRAFT_134636 [Selaginella moellendorffii]
gi|300168217|gb|EFJ34821.1| hypothetical protein SELMODRAFT_81478 [Selaginella moellendorffii]
Length = 165
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/164 (67%), Positives = 133/164 (81%), Gaps = 5/164 (3%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
YTV DFMT +++L V+ +TTVD+A L++LV+ RITG PVID+D KLVG+VSDYDL
Sbjct: 1 YTVCDFMTPRKDLFCVRVSTTVDDA-----LKLLVDNRITGLPVIDEDGKLVGVVSDYDL 55
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
LALDSISG + NS+FPE STWK F E+Q LL+KT GK VGDLMTP+P+VVR N+E
Sbjct: 56 LALDSISGKRPSTNSLFPEAGSTWKAFKEIQHLLTKTQGKTVGDLMTPSPLVVRVDMNIE 115
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
DAAR+LL+TKYRRLPVVD GKLVG+ITRGNVVRAALQ+K A E
Sbjct: 116 DAARILLDTKYRRLPVVDECGKLVGLITRGNVVRAALQVKRAAE 159
>gi|168024159|ref|XP_001764604.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684182|gb|EDQ70586.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/165 (65%), Positives = 130/165 (78%), Gaps = 6/165 (3%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
YTVGDFMT EL+ TT+DEA LE+LV++RITG PV+DD LVG+VSDYDL
Sbjct: 1 YTVGDFMTPMTELYCATENTTIDEA-----LEVLVDRRITGMPVVDDTGALVGVVSDYDL 55
Query: 143 LALDSISGSGRA-DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
LALDSISG R + S+FPE TWK F E+QKLL KTNGK +GD+MTP+P+VVR+ TNL
Sbjct: 56 LALDSISGWQRQPETSLFPEAGRTWKAFKEIQKLLVKTNGKTIGDVMTPSPLVVRKQTNL 115
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
EDAA++LL+TK+RRLPVVD DGKLVG++TRGNVVRAAL +K E
Sbjct: 116 EDAAKVLLDTKFRRLPVVDQDGKLVGLLTRGNVVRAALYMKRTAE 160
>gi|2911050|emb|CAA17560.1| putative protein [Arabidopsis thaliana]
gi|7270361|emb|CAB80129.1| putative protein [Arabidopsis thaliana]
Length = 249
Score = 199 bits (506), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 114/204 (55%), Positives = 137/204 (67%), Gaps = 40/204 (19%)
Query: 60 RRSSAVFASGTLTANSAAPSS-----------GVYTVGDFMTTKEELHVVKPTTTVDEAF 108
RRSS S T++A AAP+S G YTVGDFMT ++ LHVVKP+T+VD+A
Sbjct: 43 RRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDA- 101
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD----- 163
LE+LVEK++TG PVIDD+W LVG+VSDYDLLALDSIS S+ V
Sbjct: 102 ----LELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISVKMIQTCSLMSTVPGKTIV 157
Query: 164 -------------------STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
S +TFNE+QKL+SKT GK+VGDLMTP+P+VVR++TNLEDA
Sbjct: 158 CFICMNFLGMRFTYIMLEFSFGQTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDA 217
Query: 205 ARLLLETKYRRLPVVDADGKLVGI 228
ARLLLETK+RRLPVVDADGKLV I
Sbjct: 218 ARLLLETKFRRLPVVDADGKLVSI 241
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 170 NEVQKLLSKTNGKMVGDLMTPAPV--VVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 227
N + +K G VGD MTP VV+ +T+++DA LL+E K LPV+D + LVG
Sbjct: 65 NNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVG 124
Query: 228 IIT 230
+++
Sbjct: 125 VVS 127
>gi|293334723|ref|NP_001168672.1| uncharacterized protein LOC100382460 [Zea mays]
gi|223950107|gb|ACN29137.1| unknown [Zea mays]
gi|414587995|tpg|DAA38566.1| TPA: hypothetical protein ZEAMMB73_092445 [Zea mays]
Length = 196
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 117/169 (69%), Gaps = 38/169 (22%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
YTVGDFMT ++ LHVV+PTT VD+A LE+LV+ RI+GFPV+DDDW LVG+VSDYDL
Sbjct: 64 YTVGDFMTRRDNLHVVQPTTPVDQA-----LELLVQHRISGFPVVDDDWNLVGVVSDYDL 118
Query: 143 LALDSISGSGRADNS--MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
LALDS+SG+ AD S MFP+VDSTWKTF+E+Q++LSKTNGK++GD+MT +P+
Sbjct: 119 LALDSMSGNELADTSTNMFPDVDSTWKTFHELQRILSKTNGKVIGDVMTSSPLA------ 172
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 249
VG+ITRGNVV AAL+IK TE GA
Sbjct: 173 -------------------------VGMITRGNVVSAALKIKKKTEEGA 196
>gi|302820742|ref|XP_002992037.1| hypothetical protein SELMODRAFT_430314 [Selaginella moellendorffii]
gi|300140159|gb|EFJ06886.1| hypothetical protein SELMODRAFT_430314 [Selaginella moellendorffii]
Length = 154
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/146 (58%), Positives = 103/146 (70%), Gaps = 11/146 (7%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
AL++LV+ RITG PV D D KLVG+VSDY+LLALDSI G + NS+FPE STWK F E
Sbjct: 3 ALKLLVDNRITGLPVTDKDRKLVGVVSDYNLLALDSILGKRPSSNSLFPEAGSTWKAFKE 62
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVR-----------ETTNLEDAARLLLETKYRRLPVVD 220
+Q LL+K GK VGDLMTP P+V++ + R+LL+TKY+RLPVVD
Sbjct: 63 IQHLLTKIQGKTVGDLMTPLPLVLQTFLPYSIEISLKLLGFPLDPRILLDTKYQRLPVVD 122
Query: 221 ADGKLVGIITRGNVVRAALQIKHATE 246
G LVG+ITRGNVVRAALQ+K A E
Sbjct: 123 ESGNLVGLITRGNVVRAALQVKCAAE 148
>gi|302762130|ref|XP_002964487.1| hypothetical protein SELMODRAFT_81368 [Selaginella moellendorffii]
gi|300168216|gb|EFJ34820.1| hypothetical protein SELMODRAFT_81368 [Selaginella moellendorffii]
Length = 168
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 115/168 (68%), Gaps = 14/168 (8%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
YT+ +F+ K++ V+ +TTVD+A L++L++ RITG PVID D KLVG+VSDYDL
Sbjct: 5 YTICNFIMPKKDPFCVQVSTTVDDA-----LKLLMDNRITGLPVIDKDRKLVGVVSDYDL 59
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
LALDSISG + NS+FPE STWK F E+Q L +KT GK VGDLMTP P+VVR +
Sbjct: 60 LALDSISGKRPSTNSLFPEAGSTWKAFKEIQHLPTKTQGKTVGDLMTPLPLVVRAS---- 115
Query: 203 DAARLLLETKYRRLPVVDADGKL----VGIITRGNVVRAALQIKHATE 246
+L+T L ++D + L VG+ITRGNVVRAALQ+K A E
Sbjct: 116 -CCGRVLKTGNEELDLLDCENSLVNFQVGLITRGNVVRAALQVKRAAE 162
>gi|384246295|gb|EIE19786.1| cystathionine beta-synthase [Coccomyxa subellipsoidea C-169]
Length = 155
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 115/154 (74%), Gaps = 6/154 (3%)
Query: 91 TKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 150
TK ++ + T+VDEA LE++V+ R++G PV+D+ ++VG+VSDYDLL+LD++SG
Sbjct: 2 TKGKIFSARVNTSVDEA-----LELMVKHRVSGLPVLDESNRVVGVVSDYDLLSLDAVSG 56
Query: 151 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 210
+ + FP D+ W +F+EVQKL+ K G++VGD+MT PVVVR T++ AAR+LL+
Sbjct: 57 KMQ-EAGFFPRADTNWDSFHEVQKLVLKNAGRVVGDVMTENPVVVRANTDMTSAARMLLD 115
Query: 211 TKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 244
T+ RRLPVVD DG+LVGI TRG+V++AAL ++ A
Sbjct: 116 TRVRRLPVVDDDGRLVGIFTRGDVIKAALDVRRA 149
>gi|159479170|ref|XP_001697671.1| hypothetical protein CHLREDRAFT_185012 [Chlamydomonas reinhardtii]
gi|158274281|gb|EDP00065.1| predicted protein [Chlamydomonas reinhardtii]
Length = 197
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 106/152 (69%), Gaps = 7/152 (4%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M++ L+ V P TVD ALEILV RITG PV+D + ++VG+VSD+DLL
Sbjct: 38 TVKDVMSSGT-LYSVSPEDTVD-----AALEILVNNRITGLPVLDTEGRVVGVVSDFDLL 91
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
ALD++ G DN +FP + +W+ F EV+K+L+KT GK + D+MTP P+ VR TNL D
Sbjct: 92 ALDAV-GRVNDDNMLFPSAEQSWQAFKEVKKMLAKTAGKKIKDVMTPKPITVRPETNLND 150
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
A +L+ K RRLPVVD GKLVG+I+RGN+V
Sbjct: 151 ATSILISKKIRRLPVVDEHGKLVGLISRGNIV 182
>gi|302854300|ref|XP_002958659.1| hypothetical protein VOLCADRAFT_99959 [Volvox carteri f.
nagariensis]
gi|300255984|gb|EFJ40262.1| hypothetical protein VOLCADRAFT_99959 [Volvox carteri f.
nagariensis]
Length = 155
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 105/146 (71%), Gaps = 6/146 (4%)
Query: 91 TKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 150
T +L P TVD +ALE+LV+ RITG PV+D + ++VG+VSD+DLLALD++ G
Sbjct: 2 TSGKLFSCYPEDTVD-----SALELLVQNRITGLPVVDAENRVVGVVSDFDLLALDAV-G 55
Query: 151 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 210
D ++FP D +W+ F EV+K+L+K+ GK + D+MT P+ VR TNLEDA +L+
Sbjct: 56 RVNEDQNLFPSADQSWQAFKEVKKMLAKSAGKKIKDVMTVQPITVRPETNLEDATNILIV 115
Query: 211 TKYRRLPVVDADGKLVGIITRGNVVR 236
K RRLPVVD+DGKLVG+I+RGN+V+
Sbjct: 116 KKIRRLPVVDSDGKLVGLISRGNIVK 141
>gi|357475265|ref|XP_003607918.1| CBS domain-containing protein, putative [Medicago truncatula]
gi|355508973|gb|AES90115.1| CBS domain-containing protein, putative [Medicago truncatula]
Length = 144
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 68/92 (73%), Gaps = 7/92 (7%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDW 131
T NS ++G YTV DFMT K LHVVK TT+VDEA LE LV+ RI+G PVID++W
Sbjct: 51 TVNSVPRANGTYTVSDFMTKKHNLHVVKTTTSVDEA-----LEALVKNRISGLPVIDEEW 105
Query: 132 KLVGLVSDYDLLALDSISGSGRADNSMFPEVD 163
LVG+VSDYDLLA+D+ISGS +D S+ P VD
Sbjct: 106 NLVGVVSDYDLLAIDTISGS--SDASLIPIVD 135
>gi|434395335|ref|YP_007130282.1| putative signal transduction protein with CBS domains [Gloeocapsa
sp. PCC 7428]
gi|428267176|gb|AFZ33122.1| putative signal transduction protein with CBS domains [Gloeocapsa
sp. PCC 7428]
Length = 153
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 94/143 (65%), Gaps = 11/143 (7%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
VV+P T ++EA ++IL EKRI+G PVIDDD KLVG++S+ DL+ + +G
Sbjct: 15 VVRPETPLNEA-----IQILAEKRISGLPVIDDDGKLVGIISETDLMWQE----TGVTPP 65
Query: 157 SMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 214
+ +DS N + ++ L K G+ VG++M+ PV V +L +AA+L+ + + R
Sbjct: 66 AYIMILDSVIYLQNPAKYERDLHKALGQTVGEVMSSDPVTVSPDKSLREAAKLMHDREVR 125
Query: 215 RLPVVDADGKLVGIITRGNVVRA 237
RLPV+DA+GK++GI+TRG+VVRA
Sbjct: 126 RLPVIDAEGKIIGILTRGDVVRA 148
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V ++M+ P+VVR T L +A ++L E + LPV+D DGKLVGII+ +++
Sbjct: 3 KTVAEVMSRDPIVVRPETPLNEAIQILAEKRISGLPVIDDDGKLVGIISETDLM 56
>gi|298490018|ref|YP_003720195.1| putative signal transduction protein with CBS domains ['Nostoc
azollae' 0708]
gi|298231936|gb|ADI63072.1| putative signal transduction protein with CBS domains ['Nostoc
azollae' 0708]
Length = 152
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 95/154 (61%), Gaps = 9/154 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M++ L V+P T + EA ++IL EKRI+G PVIDD K+VG++S+ DL+
Sbjct: 4 TVADVMSSNPIL--VRPETPLKEA-----IQILAEKRISGLPVIDDAGKVVGIISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ G MF + + ++ L K G+ VG++M+ +P+ + L++
Sbjct: 57 WQET--GVTPPAYIMFLDSVIYLQNPGAYERDLHKALGQTVGEVMSKSPITITPDKPLKE 114
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
AA+++ E K RLPV+D+ G+++GI+TRG+++RA
Sbjct: 115 AAKIIQEYKVHRLPVLDSTGQVIGILTRGDIIRA 148
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+M+ P++VR T L++A ++L E + LPV+D GK+VGII+ +++
Sbjct: 3 KTVADVMSSNPILVRPETPLKEAIQILAEKRISGLPVIDDAGKVVGIISETDLM 56
>gi|443326695|ref|ZP_21055340.1| putative transcriptional regulator, contains C-terminal CBS domains
[Xenococcus sp. PCC 7305]
gi|442793685|gb|ELS03127.1| putative transcriptional regulator, contains C-terminal CBS domains
[Xenococcus sp. PCC 7305]
Length = 152
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 89/153 (58%), Gaps = 9/153 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MTT VVKP T + EA + IL E + +G PV+DD KLVG++S+ DL+
Sbjct: 4 TVADIMTTNP--IVVKPNTPLQEA-----ISILAENKFSGLPVVDDAGKLVGVISESDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+S G MF + K + + K G+ VG++M+ P+ V ++ D
Sbjct: 57 WQES--GIESPPYIMFLDSIIYLKNPARYNQEIHKALGQTVGEVMSDRPITVEAEQSVPD 114
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
AAR++ + K RRLPVVD + K++GI+T+G+V++
Sbjct: 115 AARIMHDKKVRRLPVVDEEAKIIGIVTQGDVIK 147
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MT P+VV+ T L++A +L E K+ LPVVD GKLVG+I+ +++
Sbjct: 3 KTVADIMTTNPIVVKPNTPLQEAISILAENKFSGLPVVDDAGKLVGVISESDLM 56
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVG+ M+ + P T E VP A I+ +K++ PV+D++ K++G+V+ D++
Sbjct: 94 TVGEVMSDR-------PITVEAEQSVPDAARIMHDKKVRRLPVVDEEAKIIGIVTQGDVI 146
Query: 144 AL 145
+
Sbjct: 147 KM 148
>gi|443323171|ref|ZP_21052180.1| putative transcriptional regulator, contains C-terminal CBS domains
[Gloeocapsa sp. PCC 73106]
gi|442787081|gb|ELR96805.1| putative transcriptional regulator, contains C-terminal CBS domains
[Gloeocapsa sp. PCC 73106]
Length = 144
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 85/139 (61%), Gaps = 6/139 (4%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T E + A++IL EKRI+G PV+DD+ LVG++SD DL+ ++ G MF
Sbjct: 5 PLTVQPETPLSEAIKILAEKRISGLPVVDDEGALVGVISDTDLMWQET--GVEPPPYIMF 62
Query: 160 PEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+DS N +K + K G+ VG++MT P+ + ++ +AAR++ + RRLP
Sbjct: 63 --LDSVIYLENPKRYEKEIHKALGQTVGEVMTSKPITITPEQSMREAARVMHDKNIRRLP 120
Query: 218 VVDADGKLVGIITRGNVVR 236
V+D + K+VGIITRG+++R
Sbjct: 121 VIDTEAKVVGIITRGDIIR 139
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 188 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
MTP P+ V+ T L +A ++L E + LPVVD +G LVG+I+
Sbjct: 1 MTPNPLTVQPETPLSEAIKILAEKRISGLPVVDDEGALVGVIS 43
>gi|428304476|ref|YP_007141301.1| hypothetical protein Cri9333_0874 [Crinalium epipsammum PCC 9333]
gi|428246011|gb|AFZ11791.1| CBS domain containing membrane protein [Crinalium epipsammum PCC
9333]
Length = 152
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 94/153 (61%), Gaps = 9/153 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M+ ++ V+P T +++A ++IL E+RITG PV+DD KLVG++S+ DL+
Sbjct: 4 TVADVMS--RDVITVQPQTPLNQA-----IQILAERRITGLPVVDDADKLVGVISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ G MF + + ++ L K G+ VG++MT +V++ L++
Sbjct: 57 WQET--GVTPPAYIMFLDSVIYLQNPTTYERDLHKALGQTVGEVMTTEAIVIKPEKPLQE 114
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
AA+L+ E RRLPVVD GK++GI+TRG+++R
Sbjct: 115 AAKLMHEKHIRRLPVVDDTGKVLGILTRGDIIR 147
>gi|354565001|ref|ZP_08984177.1| putative signal transduction protein with CBS domains [Fischerella
sp. JSC-11]
gi|353550127|gb|EHC19566.1| putative signal transduction protein with CBS domains [Fischerella
sp. JSC-11]
Length = 154
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 93/154 (60%), Gaps = 9/154 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M+ + VV+P T + EA ++IL E+RI+G PV+DD KLVG++S+ DL+
Sbjct: 4 TVADVMS--RDPIVVRPETPLKEA-----IQILAERRISGLPVVDDAGKLVGIISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ G MF + K ++ L K G+ VG++M+ P+ V L +
Sbjct: 57 WQET--GVTPPAYIMFLDSVIYLKNPATYERDLHKALGQTVGEVMSKQPITVSPDKTLRE 114
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
AA+++ + RLPV+D++G+++GI+TRG+V+RA
Sbjct: 115 AAKIMNDRNVHRLPVLDSEGQVIGILTRGDVIRA 148
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+M+ P+VVR T L++A ++L E + LPVVD GKLVGII+ +++
Sbjct: 3 KTVADVMSRDPIVVRPETPLKEAIQILAERRISGLPVVDDAGKLVGIISETDLM 56
>gi|428779471|ref|YP_007171257.1| contains C-terminal CBS domains [Dactylococcopsis salina PCC 8305]
gi|428693750|gb|AFZ49900.1| putative transcriptional regulator, contains C-terminal CBS domains
[Dactylococcopsis salina PCC 8305]
Length = 153
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 93/155 (60%), Gaps = 13/155 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT VV+P T + EA +++LVEK+I+G PV+D+ KLVG++S+ DL+
Sbjct: 4 TVADIMTANP--AVVQPETPLKEA-----IKLLVEKKISGLPVVDEAEKLVGVLSEADLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G F +DS N Q K L K G+ VG++M+ V + L
Sbjct: 57 WQET----GVETPPYFMFLDSVIYLQNPAQYDKELHKALGQTVGEVMSDRAVSITGDRPL 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
++AA+L+ + + RRLPVVD GK+VGIITRG++VR
Sbjct: 113 KEAAQLMHKREVRRLPVVDEAGKVVGIITRGDIVR 147
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MT P VV+ T L++A +LL+E K LPVVD KLVG+++ +++
Sbjct: 3 KTVADIMTANPAVVQPETPLKEAIKLLVEKKISGLPVVDEAEKLVGVLSEADLM 56
>gi|427731961|ref|YP_007078198.1| putative contains C-terminal CBS domains [Nostoc sp. PCC 7524]
gi|427367880|gb|AFY50601.1| putative transcriptional regulator, contains C-terminal CBS domains
[Nostoc sp. PCC 7524]
Length = 154
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 93/154 (60%), Gaps = 9/154 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M+ E VV+P T + EA ++IL E+RI+G PV+DD KL+G++S+ DL+
Sbjct: 4 TVADIMSP--EPIVVRPDTPLQEA-----IQILAERRISGLPVVDDVGKLLGIISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ G MF + K ++ L K G++VG++M+ PV + ++
Sbjct: 57 WQET--GVTPPAYIMFLDSVIYLKNPAVYERDLHKALGQIVGEVMSKNPVTITPDKTVKQ 114
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
AA+L+ + RLPV+D+ GK+VGI+TRG+++RA
Sbjct: 115 AAQLMHDRNVHRLPVLDSIGKVVGILTRGDIIRA 148
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+M+P P+VVR T L++A ++L E + LPVVD GKL+GII+ +++
Sbjct: 3 KTVADIMSPEPIVVRPDTPLQEAIQILAERRISGLPVVDDVGKLLGIISETDLM 56
>gi|261402855|ref|YP_003247079.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
gi|261369848|gb|ACX72597.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
Length = 158
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 91/157 (57%), Gaps = 11/157 (7%)
Query: 88 FMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 147
FM K+ + KP T D + +++ EKRI+G PV++DD +LVG++S+ D++ +
Sbjct: 4 FMLVKDVMK--KPITVKDNDDLTEVIKLFREKRISGAPVLNDDGELVGIISESDIIK--T 59
Query: 148 ISGSGRADNSMFPE----VDSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
++ N + P ++ KT E ++ L K V D+MT VV +
Sbjct: 60 LTTHDEDLNLILPSPLDLIELPLKTAIKIEEFKEDLKKALKTKVKDVMTKDVVVAKPDMT 119
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ DAA+L++E K +RLPVVD DGKL+GIITRG+++ A
Sbjct: 120 INDAAKLMVEHKIKRLPVVDEDGKLIGIITRGDIIEA 156
>gi|17231305|ref|NP_487853.1| hypothetical protein alr3813 [Nostoc sp. PCC 7120]
gi|17132947|dbj|BAB75512.1| alr3813 [Nostoc sp. PCC 7120]
Length = 152
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 94/156 (60%), Gaps = 13/156 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M+ VVKP T + EA ++IL E+RI+G PV+D+D KL+G++S+ DL+
Sbjct: 4 TVADVMSHNPV--VVKPETPLQEA-----IKILAERRISGLPVVDNDGKLLGIISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G MF +DS N ++ L K G+ VG++M+ PV V ++
Sbjct: 57 WQET--GVTPPAYIMF--LDSVIYLQNPAVYERDLHKALGQTVGEVMSKNPVTVSPEKSV 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ AA+L+ + RLPV+D G+++GI+TRG+++RA
Sbjct: 113 KQAAQLMHDRNVHRLPVLDDAGQVIGILTRGDIIRA 148
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+M+ PVVV+ T L++A ++L E + LPVVD DGKL+GII+ +++
Sbjct: 3 KTVADVMSHNPVVVKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLM 56
>gi|75908110|ref|YP_322406.1| signal transduction protein [Anabaena variabilis ATCC 29413]
gi|75701835|gb|ABA21511.1| Predicted signal transduction protein containing CBS domains
[Anabaena variabilis ATCC 29413]
Length = 152
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 94/156 (60%), Gaps = 13/156 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M+ VVKP T + EA ++IL E+RI+G PV+D+D KL+G++S+ DL+
Sbjct: 4 TVADVMSHNPV--VVKPETPLQEA-----IKILAERRISGLPVVDNDGKLLGIISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G MF +DS N ++ L K G+ VG++M+ PV V ++
Sbjct: 57 WQET--GVTPPAYIMF--LDSVIYLQNPAVYERDLHKALGQTVGEVMSKNPVTVSPEKSV 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ AA+L+ + RLPV+D G+++GI+TRG+++RA
Sbjct: 113 KQAAQLMHDRNVHRLPVLDDAGQVIGILTRGDIIRA 148
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+M+ PVVV+ T L++A ++L E + LPVVD DGKL+GII+ +++
Sbjct: 3 KTVADVMSHNPVVVKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLM 56
>gi|428770480|ref|YP_007162270.1| signal transduction protein [Cyanobacterium aponinum PCC 10605]
gi|428684759|gb|AFZ54226.1| putative signal transduction protein with CBS domains
[Cyanobacterium aponinum PCC 10605]
Length = 152
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVG+ MT VKP T + EA +LVE +I+G PVI + +LVG++S+ DL+
Sbjct: 4 TVGEVMTPNP--ITVKPETPLKEAIA-----LLVEHKISGMPVIKEGGELVGILSESDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ G M + + N K + K G+ V D+M+ P+ + T +++
Sbjct: 57 WQET--GVEPPPYIMILDSIIYLQNPNRYDKEIHKALGQTVADVMSDKPITISSTKTIKE 114
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
AA+LL + + RRLPVVD+D K++GI+T+G+++RA
Sbjct: 115 AAQLLHQKQIRRLPVVDSDKKIIGILTQGDIIRA 148
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K VG++MTP P+ V+ T L++A LL+E K +PV+ G+LVGI++ +++
Sbjct: 2 NKTVGEVMTPNPITVKPETPLKEAIALLVEHKISGMPVIKEGGELVGILSESDLM 56
>gi|113475881|ref|YP_721942.1| signal transduction protein [Trichodesmium erythraeum IMS101]
gi|110166929|gb|ABG51469.1| putative signal transduction protein with CBS domains
[Trichodesmium erythraeum IMS101]
Length = 153
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 82/142 (57%), Gaps = 11/142 (7%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
VKP T + EA ++IL EK I+G PV+DD+ KLVG+VS+ DL+ + SG
Sbjct: 17 VKPKTPLKEA-----IKILAEKHISGLPVVDDNGKLVGIVSETDLMWQE----SGVTPPP 67
Query: 158 MFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 215
+DS N +K + K G+ V ++MT P+ R L A+L+ E R
Sbjct: 68 YIMLLDSIIFLENPGRYEKEIHKALGETVEEIMTKNPLTTRSQERLSATAKLMNERSIHR 127
Query: 216 LPVVDADGKLVGIITRGNVVRA 237
LPVVD +GK++GI+TRG+++RA
Sbjct: 128 LPVVDENGKVIGILTRGDIIRA 149
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 37/55 (67%)
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K+V ++M+ P+ V+ T L++A ++L E LPVVD +GKLVGI++ +++
Sbjct: 3 NKIVSEVMSSNPITVKPKTPLKEAIKILAEKHISGLPVVDDNGKLVGIVSETDLM 57
>gi|443309785|ref|ZP_21039472.1| putative transcriptional regulator, contains C-terminal CBS domains
[Synechocystis sp. PCC 7509]
gi|442780178|gb|ELR90384.1| putative transcriptional regulator, contains C-terminal CBS domains
[Synechocystis sp. PCC 7509]
Length = 154
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 90/143 (62%), Gaps = 11/143 (7%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
VVKP T ++EA ++I+ E+RI+G PV+ DD +LVG++S+ DL+ ++ G
Sbjct: 15 VVKPQTPLNEA-----IKIMAERRISGLPVVGDDDRLVGIISETDLMWQET--GVTPPAY 67
Query: 157 SMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 214
MF +DS N ++ L K G+ VG++M+ P+ + L++AA+LL + R
Sbjct: 68 IMF--LDSVIFLQNPATYERDLHKALGQTVGEVMSTDPITISADKPLKNAAQLLHDRDIR 125
Query: 215 RLPVVDADGKLVGIITRGNVVRA 237
RLPVVDA+ +VGI+TRG+++RA
Sbjct: 126 RLPVVDANNLVVGILTRGDIIRA 148
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V + MT PVVV+ T L +A +++ E + LPVV D +LVGII+ +++
Sbjct: 3 KTVAEAMTSLPVVVKPQTPLNEAIKIMAERRISGLPVVGDDDRLVGIISETDLM 56
>gi|414077401|ref|YP_006996719.1| hypothetical protein ANA_C12164 [Anabaena sp. 90]
gi|413970817|gb|AFW94906.1| CBS domain-containing protein [Anabaena sp. 90]
Length = 152
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 89/155 (57%), Gaps = 13/155 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M+ L V P T + EA ++IL EK I+G PVIDD KLVG++S+ DL+
Sbjct: 4 TVADVMSRDPIL--VHPQTPLKEA-----IQILAEKHISGLPVIDDAGKLVGIISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G + +DS N ++ L K G+ VG++M+ P+ + L
Sbjct: 57 WQET----GITPPAYIMILDSVIYLQNPATYERDLHKALGQTVGEVMSKNPLTISPDKPL 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+AA+L+ E K RLPV+D GK++GI+TRG+++R
Sbjct: 113 REAAKLIQEHKVHRLPVLDNAGKVIGILTRGDIIR 147
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+M+ P++V T L++A ++L E LPV+D GKLVGII+ +++
Sbjct: 3 KTVADVMSRDPILVHPQTPLKEAIQILAEKHISGLPVIDDAGKLVGIISETDLM 56
>gi|428202316|ref|YP_007080905.1| putative contains C-terminal CBS domains [Pleurocapsa sp. PCC 7327]
gi|427979748|gb|AFY77348.1| putative transcriptional regulator, contains C-terminal CBS domains
[Pleurocapsa sp. PCC 7327]
Length = 153
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 92/157 (58%), Gaps = 14/157 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT VKP T ++EA +++L EK I+G PV+DD KLVG++S+ DL+
Sbjct: 4 TVADVMTPNP--IAVKPQTPLNEA-----IKLLCEKHISGMPVVDDAGKLVGVISESDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G +DS N +K + K G+ VG++MT P+ + +L
Sbjct: 57 WQET----GVEPPPYIMILDSVIYLQNPARYEKEIHKALGQTVGEVMTDKPISITPDRSL 112
Query: 202 EDAARLLLETKYRRLPVVDA-DGKLVGIITRGNVVRA 237
++AAR++ E K RRL VVD DGK +GI+T+G+++RA
Sbjct: 113 KEAARIMHEKKIRRLVVVDGEDGKAIGILTQGDIIRA 149
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MTP P+ V+ T L +A +LL E +PVVD GKLVG+I+ +++
Sbjct: 3 KTVADVMTPNPIAVKPQTPLNEAIKLLCEKHISGMPVVDDAGKLVGVISESDLM 56
>gi|171700533|gb|ACB53514.1| unknown [Cyanothece sp. ATCC 51142]
Length = 145
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 87/144 (60%), Gaps = 7/144 (4%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T + + A++IL EK+I+G PV+DD KLVG++S+ DL+ + +G
Sbjct: 5 PITVTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLMWQE----TGVEPPPYI 60
Query: 160 PEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+DS N +K + K G+ VG++M+ P+ ++ T +L++AA L+ E K RRLP
Sbjct: 61 MILDSVIYLQNPARYEKEVHKALGQTVGEVMSDKPISIKGTKSLKEAAHLMHEKKIRRLP 120
Query: 218 VVDADG-KLVGIITRGNVVRAALQ 240
V+D + K++GI+T+G+++R Q
Sbjct: 121 VIDENNTKVIGILTQGDIIRTMAQ 144
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 188 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
MT P+ V T L +A ++L E K LPVVD GKLVGII+ +++
Sbjct: 1 MTQNPITVTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLM 48
>gi|304570678|ref|YP_001805580.2| hypothetical protein cce_4166 [Cyanothece sp. ATCC 51142]
gi|354552638|ref|ZP_08971946.1| CBS domain containing protein [Cyanothece sp. ATCC 51472]
gi|353555960|gb|EHC25348.1| CBS domain containing protein [Cyanothece sp. ATCC 51472]
Length = 153
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 87/144 (60%), Gaps = 7/144 (4%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T + + A++IL EK+I+G PV+DD KLVG++S+ DL+ + +G
Sbjct: 13 PITVTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLMWQE----TGVEPPPYI 68
Query: 160 PEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+DS N +K + K G+ VG++M+ P+ ++ T +L++AA L+ E K RRLP
Sbjct: 69 MILDSVIYLQNPARYEKEVHKALGQTVGEVMSDKPISIKGTKSLKEAAHLMHEKKIRRLP 128
Query: 218 VVDADG-KLVGIITRGNVVRAALQ 240
V+D + K++GI+T+G+++R Q
Sbjct: 129 VIDENNTKVIGILTQGDIIRTMAQ 152
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V +MT P+ V T L +A ++L E K LPVVD GKLVGII+ +++
Sbjct: 3 KTVAQVMTQNPITVTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLM 56
>gi|218248686|ref|YP_002374057.1| hypothetical protein PCC8801_3960 [Cyanothece sp. PCC 8801]
gi|257061751|ref|YP_003139639.1| hypothetical protein Cyan8802_4005 [Cyanothece sp. PCC 8802]
gi|218169164|gb|ACK67901.1| CBS domain containing protein [Cyanothece sp. PCC 8801]
gi|256591917|gb|ACV02804.1| CBS domain containing protein [Cyanothece sp. PCC 8802]
Length = 153
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 82/129 (63%), Gaps = 7/129 (5%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN- 170
A+ IL EKRI+G PV+DD KLVG++S+ DL+ ++ G +DS N
Sbjct: 25 AIRILAEKRISGLPVVDDSGKLVGVISETDLMWQET----GVEPPPYIMILDSVIYLQNP 80
Query: 171 -EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK-LVGI 228
+K + K G+ VG++M+ P+ ++ + +L +AA+++ E K RRLPVVD GK ++GI
Sbjct: 81 ARYEKEIHKALGQTVGEVMSNHPISIKSSQSLREAAQIMHEKKIRRLPVVDETGKQVIGI 140
Query: 229 ITRGNVVRA 237
+T+G+++R+
Sbjct: 141 LTQGDIIRS 149
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K+V D+MTP + V T L +A R+L E + LPVVD GKLVG+I+ +++
Sbjct: 3 KIVADVMTPNAITVTRQTPLSEAIRILAEKRISGLPVVDDSGKLVGVISETDLM 56
>gi|428206039|ref|YP_007090392.1| putative signal transduction protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428007960|gb|AFY86523.1| putative signal transduction protein with CBS domains
[Chroococcidiopsis thermalis PCC 7203]
Length = 154
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 91/153 (59%), Gaps = 9/153 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT + VV+P T++ +A +++L EKRI+G PV+DD KL+G +S+ DL+
Sbjct: 4 TVADVMT--RDPIVVRPETSLHDA-----IKLLAEKRISGLPVVDDAGKLIGTISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ G MF + K + ++ L K G+ VG++M+ + V L D
Sbjct: 57 WQET--GVTPPAYIMFLDSVIFLKNPAQYERDLHKALGQTVGEVMSQDLITVAPDKPLRD 114
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
AA+L+ + K RLPVVD GK++GI+TRG++VR
Sbjct: 115 AAQLMHDRKIPRLPVVDPSGKVIGILTRGDIVR 147
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MT P+VVR T+L DA +LL E + LPVVD GKL+G I+ +++
Sbjct: 3 KTVADVMTRDPIVVRPETSLHDAIKLLAEKRISGLPVVDDAGKLIGTISETDLM 56
>gi|428212235|ref|YP_007085379.1| hypothetical protein Oscil6304_1781 [Oscillatoria acuminata PCC
6304]
gi|428000616|gb|AFY81459.1| CBS-domain-containing membrane protein [Oscillatoria acuminata PCC
6304]
Length = 154
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 94/167 (56%), Gaps = 18/167 (10%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV + MT + VV T++DEA ++I+ E+R +G PV+D KL+G++S DL+
Sbjct: 4 TVAEIMT--RDPIVVTSQTSLDEA-----IQIMAERRFSGLPVVDAAGKLIGIISQGDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
+S G +DS N + Q+ L K G+ VG++M+ P +R +L
Sbjct: 57 WRES----GVTPPPYIMVLDSVIYLENPAKYQRDLHKALGQTVGEVMSTNPQTIRPEKSL 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
+AA L+ E RLPV+D++GK +GI+TRG++VRA ATE G
Sbjct: 113 REAAELMHEKGVHRLPVIDSEGKPIGILTRGDIVRAM-----ATEEG 154
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 41/54 (75%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V ++MT P+VV T+L++A +++ E ++ LPVVDA GKL+GII++G+++
Sbjct: 3 KTVAEIMTRDPIVVTSQTSLDEAIQIMAERRFSGLPVVDAAGKLIGIISQGDLM 56
>gi|357475267|ref|XP_003607919.1| CBS domain-containing protein, putative [Medicago truncatula]
gi|355508974|gb|AES90116.1| CBS domain-containing protein, putative [Medicago truncatula]
Length = 77
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 57/75 (76%), Gaps = 7/75 (9%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 148
MT K LHVVK TT+VDEA LE LV+ RI+G PVID++W LVG+VSDYDLLA+D+I
Sbjct: 1 MTKKHNLHVVKTTTSVDEA-----LEALVKNRISGLPVIDEEWNLVGVVSDYDLLAIDTI 55
Query: 149 SGSGRADNSMFPEVD 163
SGS +D S+ P VD
Sbjct: 56 SGS--SDASLIPIVD 68
>gi|434384451|ref|YP_007095062.1| putative transcriptional regulator, contains C-terminal CBS domains
[Chamaesiphon minutus PCC 6605]
gi|428015441|gb|AFY91535.1| putative transcriptional regulator, contains C-terminal CBS domains
[Chamaesiphon minutus PCC 6605]
Length = 152
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 90/153 (58%), Gaps = 9/153 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+M EL VKP+T + +A +++LV++ I+G PVIDDD KLVG++S+ DL+
Sbjct: 5 VADWMN--RELITVKPSTPLADA-----VKLLVDRHISGLPVIDDDGKLVGVISEADLMW 57
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ G + +F +K + L K G+ VG++MTP + + T L +A
Sbjct: 58 REQ--GLEQPPYMIFLGGVIYFKNPLTYDRDLHKALGQTVGEVMTPHAISISADTTLPEA 115
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
AR+L + K RLPVVD + + +GIIT ++VRA
Sbjct: 116 ARILHDKKIHRLPVVDENDRPIGIITESDIVRA 148
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K+V D M + V+ +T L DA +LL++ LPV+D DGKLVG+I+ +++
Sbjct: 3 KIVADWMNRELITVKPSTPLADAVKLLVDRHISGLPVIDDDGKLVGVISEADLM 56
>gi|428778151|ref|YP_007169938.1| signal transduction protein [Halothece sp. PCC 7418]
gi|428692430|gb|AFZ45724.1| putative signal transduction protein with CBS domains [Halothece
sp. PCC 7418]
Length = 152
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 93/155 (60%), Gaps = 13/155 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT VV+P T + EA +++LVEK+I+G PV++ D KLVG++S+ DL+
Sbjct: 4 TVADVMTANPA--VVQPDTPLKEA-----IKVLVEKKISGLPVVNKDGKLVGVLSEADLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G MF +DS N +K L K G+ V ++MT + + L
Sbjct: 57 WQET--GVNPPPYFMF--LDSVIYLENPARYEKELHKALGQTVEEVMTDRAISITGDRPL 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
++AA L+ + + RRLPV+D +GK+VGIITRG++VR
Sbjct: 113 KEAAHLMHKREVRRLPVLDDEGKVVGIITRGDIVR 147
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MT P VV+ T L++A ++L+E K LPVV+ DGKLVG+++ +++
Sbjct: 3 KTVADVMTANPAVVQPDTPLKEAIKVLVEKKISGLPVVNKDGKLVGVLSEADLM 56
>gi|428223589|ref|YP_007107686.1| putative signal transduction protein [Geitlerinema sp. PCC 7407]
gi|427983490|gb|AFY64634.1| putative signal transduction protein with CBS domains [Geitlerinema
sp. PCC 7407]
Length = 153
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 87/156 (55%), Gaps = 13/156 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT P T +A + A++IL +KRI+G PV+D KLVG++S+ DL+
Sbjct: 4 TVADVMTRD-------PITVQPDAPLKDAIQILADKRISGLPVVDQSGKLVGVISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNL 201
+S G + +DS N + + L K G+ VG++M+ PV + L
Sbjct: 57 WRES----GVTPPAYIMLLDSVIYLENPARYDRDLHKALGQSVGEVMSRDPVTISPDKTL 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+AAR+L E RLPV+D ++VGI+TRG+VVRA
Sbjct: 113 GEAARILHERSVHRLPVIDDQHRIVGILTRGDVVRA 148
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
+ V D+MT P+ V+ L+DA ++L + + LPVVD GKLVG+I+ +++
Sbjct: 2 ARTVADVMTRDPITVQPDAPLKDAIQILADKRISGLPVVDQSGKLVGVISETDLM 56
>gi|440682247|ref|YP_007157042.1| putative signal transduction protein with CBS domains [Anabaena
cylindrica PCC 7122]
gi|428679366|gb|AFZ58132.1| putative signal transduction protein with CBS domains [Anabaena
cylindrica PCC 7122]
Length = 152
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 90/155 (58%), Gaps = 13/155 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT + P E + A++IL EKRI+G PVI++ KLVG++S+ DL+
Sbjct: 4 TVADVMT-------INPIVVSLETPLKEAIQILAEKRISGLPVINNAGKLVGIISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G MF +DS N + L K G+ VG++M+ P+ + +L
Sbjct: 57 WQET--GVTPPAYIMF--LDSVIYLQNPATYDRDLHKALGQTVGEVMSKNPLTITPDKSL 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
++AA+++ E K RLPV+D G+++GI+TRG+++R
Sbjct: 113 KEAAKIIQEHKVHRLPVLDNAGQVIGILTRGDIIR 147
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MT P+VV T L++A ++L E + LPV++ GKLVGII+ +++
Sbjct: 3 KTVADVMTINPIVVSLETPLKEAIQILAEKRISGLPVINNAGKLVGIISETDLM 56
>gi|119511029|ref|ZP_01630149.1| hypothetical protein N9414_09801 [Nodularia spumigena CCY9414]
gi|119464280|gb|EAW45197.1| hypothetical protein N9414_09801 [Nodularia spumigena CCY9414]
Length = 165
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 13/156 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT P E + A++IL EKRI+G PV+DD KLVG++S+ DL+
Sbjct: 17 TVTDIMTRD-------PIVLRTETPLKEAIQILAEKRISGIPVVDDVGKLVGIISETDLM 69
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G MF +DS N + L K G+ VG++M+ PV + +
Sbjct: 70 WQET--GVTPPAYIMF--LDSVIYLQNPATYDRELHKALGQTVGEVMSKNPVTIAPEKTV 125
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
++AA+L+ + RLPV+D+ ++VGI+TRG++VRA
Sbjct: 126 KEAAQLMHDRSVHRLPVIDSQSQVVGIVTRGDIVRA 161
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
K +SK K V D+MT P+V+R T L++A ++L E + +PVVD GKLVGII+ +
Sbjct: 8 KGISKQMSKTVTDIMTRDPIVLRTETPLKEAIQILAEKRISGIPVVDDVGKLVGIISETD 67
Query: 234 VV 235
++
Sbjct: 68 LM 69
>gi|308809011|ref|XP_003081815.1| unnamed protein product [Ostreococcus tauri]
gi|116060282|emb|CAL55618.1| unnamed protein product [Ostreococcus tauri]
Length = 285
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 12/146 (8%)
Query: 107 AFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA--DNSMFP---- 160
A V A+++LVE RI+ PV+D+ ++G+VS+YDL+A + R+ D+ MFP
Sbjct: 85 ASVFEAMKLLVENRISAVPVVDEKGVVLGVVSEYDLMARVGKKETTRSVKDDGMFPRVGR 144
Query: 161 ------EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 214
V W F+ +Q+ + K +G V M P T L +A L+L+
Sbjct: 145 CDEFNGNVKQMWNQFHNLQERMYKASGTKVLTAMHETPATCTPDTPLVEATELMLDKNLA 204
Query: 215 RLPVVDADGKLVGIITRGNVVRAALQ 240
RLPVVD G L+GI++RG+++R Q
Sbjct: 205 RLPVVDERGALLGILSRGDIMRRTFQ 230
>gi|300868882|ref|ZP_07113488.1| signal transduction protein [Oscillatoria sp. PCC 6506]
gi|300333099|emb|CBN58680.1| signal transduction protein [Oscillatoria sp. PCC 6506]
Length = 175
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 13/156 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT L +P + EA ++IL E+RI+G PV+D++ KLVG++S+ DL+
Sbjct: 26 TVADVMTRDPIL--ARPEMPLSEA-----IKILAERRISGLPVVDENEKLVGVISETDLM 78
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
+ G + +DS N ++ L K G+ VG++M+ P+ +L
Sbjct: 79 WQEV----GVTPPAYIMLLDSVIYLENPGRYERELHKALGQTVGEVMSRDPITTTPDKSL 134
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+AARL+ E RLPV+D GK +GI+TRG++VRA
Sbjct: 135 PEAARLMHERSIHRLPVIDPTGKAIGILTRGDIVRA 170
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 167 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 226
+ N + ++ KT V D+MT P++ R L +A ++L E + LPVVD + KLV
Sbjct: 14 REINRIPPIMPKT----VADVMTRDPILARPEMPLSEAIKILAERRISGLPVVDENEKLV 69
Query: 227 GIITRGNVV 235
G+I+ +++
Sbjct: 70 GVISETDLM 78
>gi|16331252|ref|NP_441980.1| photosystem I assembly protein [Synechocystis sp. PCC 6803]
gi|383322995|ref|YP_005383848.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326164|ref|YP_005387017.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492048|ref|YP_005409724.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384437316|ref|YP_005652040.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|451815408|ref|YP_007451860.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|1001427|dbj|BAA10050.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|339274348|dbj|BAK50835.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|359272314|dbj|BAL29833.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275484|dbj|BAL33002.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278654|dbj|BAL36171.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407961369|dbj|BAM54609.1| photosystem I assembly protein [Bacillus subtilis BEST7613]
gi|451781377|gb|AGF52346.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
Length = 155
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 90/157 (57%), Gaps = 14/157 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVG+ MT VKP T + +A + +L E RI+G PV+DD KLVG++SD DL+
Sbjct: 4 TVGEVMTPNP--ITVKPDTPLQDA-----IRLLAENRISGMPVLDDQEKLVGVISDTDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
+ SG M +DS N ++ L K G+ VG++M P+ + T L
Sbjct: 57 WQE--SGVDTPPYVML--LDSIIYLQNPARHERELHKALGQTVGEVMNDVPISILPTQTL 112
Query: 202 EDAARLLLETKYRRLPVVDADGK-LVGIITRGNVVRA 237
+AA L+ E K RRLPV++ + + L+GI+T+G+++RA
Sbjct: 113 REAAHLMNEKKIRRLPVLNVESRQLIGILTQGDIIRA 149
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+ VG++MTP P+ V+ T L+DA RLL E + +PV+D KLVG+I+
Sbjct: 3 RTVGEVMTPNPITVKPDTPLQDAIRLLAENRISGMPVLDDQEKLVGVIS 51
>gi|428312214|ref|YP_007123191.1| contains C-terminal CBS domains [Microcoleus sp. PCC 7113]
gi|428253826|gb|AFZ19785.1| putative transcriptional regulator, contains C-terminal CBS domains
[Microcoleus sp. PCC 7113]
Length = 155
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 90/156 (57%), Gaps = 13/156 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M+ + +VKP T + EA ++IL E+RI+G PV+DD LVG++S+ DLL
Sbjct: 4 TVADVMS--RDPIMVKPQTPIKEA-----IKILAEQRISGLPVVDDAGSLVGVISETDLL 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G MF +DS N ++ L K G+ VG++M+ PV V L
Sbjct: 57 WQET--GVEPPIYIMF--LDSVIFLENPARHEQELHKALGQTVGEVMSTNPVTVESDQPL 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
AA+L+ E RRL VV+ GK++GI+T G++VRA
Sbjct: 113 RKAAKLMQEKSIRRLAVVNDQGKVIGILTPGDIVRA 148
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+M+ P++V+ T +++A ++L E + LPVVD G LVG+I+ +++
Sbjct: 2 AKTVADVMSRDPIMVKPQTPIKEAIKILAEQRISGLPVVDDAGSLVGVISETDLL 56
>gi|307153353|ref|YP_003888737.1| hypothetical protein Cyan7822_3520 [Cyanothece sp. PCC 7822]
gi|306983581|gb|ADN15462.1| CBS domain containing protein [Cyanothece sp. PCC 7822]
Length = 153
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 92/157 (58%), Gaps = 14/157 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVGD MT + V P T + EA ++++ EK+I+G PV+++ LVG++S+ DL+
Sbjct: 4 TVGDVMTHNP--YTVTPQTPLSEA-----IKLMAEKKISGLPVVNEIGNLVGVISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G +DS N +K + K G+ VG++M+ P+ ++ L
Sbjct: 57 WQET----GVEPPPYIMILDSVIYLQNPARYEKEIHKALGQTVGEVMSDKPISIKAYQPL 112
Query: 202 EDAARLLLETKYRRLPVVD-ADGKLVGIITRGNVVRA 237
+AA+L+ + K RRLPV+D + K++GIITRG+++RA
Sbjct: 113 REAAQLMHDKKIRRLPVIDETEAKVIGIITRGDIIRA 149
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K VGD+MT P V T L +A +L+ E K LPVV+ G LVG+I+ +++
Sbjct: 3 KTVGDVMTHNPYTVTPQTPLSEAIKLMAEKKISGLPVVNEIGNLVGVISETDLM 56
>gi|282896431|ref|ZP_06304452.1| Predicted signal transduction protein containing CBS domain
proteins [Raphidiopsis brookii D9]
gi|281198719|gb|EFA73599.1| Predicted signal transduction protein containing CBS domain
proteins [Raphidiopsis brookii D9]
Length = 152
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 91/156 (58%), Gaps = 13/156 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV MT + V P T + +A ++IL EK+I+G PV+DD KLVG++S+ DL+
Sbjct: 4 TVAQVMTHNPIM--VNPQTPLKQA-----IQILAEKQISGLPVVDDMGKLVGIISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G MF +DS N ++ L K G+ VG++M+ P+ + +L
Sbjct: 57 WQET--GITPPAYIMF--LDSVIYLQNPATYERDLHKALGQTVGEVMSNNPITISPDQSL 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ AA+++ + K RRLPVVD ++GI+TRG+++RA
Sbjct: 113 KAAAKIIQDHKVRRLPVVDDSATVIGILTRGDIIRA 148
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V +MT P++V T L+ A ++L E + LPVVD GKLVGII+ +++
Sbjct: 3 KTVAQVMTHNPIMVNPQTPLKQAIQILAEKQISGLPVVDDMGKLVGIISETDLM 56
>gi|166364594|ref|YP_001656867.1| IMP dehydrogenase [Microcystis aeruginosa NIES-843]
gi|166086967|dbj|BAG01675.1| IMP dehydrogenase [Microcystis aeruginosa NIES-843]
Length = 155
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 87/154 (56%), Gaps = 10/154 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT P T + A++IL EKR +G PV+DD+ +L+G++S+ DL+
Sbjct: 4 TVADIMTPN-------PITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ +G M + + + +KLL K G+ VG++MT P+ + L++
Sbjct: 57 WQE--TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKE 114
Query: 204 AARLLLETKYRRLPVVDAD-GKLVGIITRGNVVR 236
AA L+ + RRLPV++ + K++GIITRG+++R
Sbjct: 115 AASLMYDRHVRRLPVIEEETHKVIGIITRGDIIR 148
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 3 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLM 56
>gi|434406932|ref|YP_007149817.1| putative transcriptional regulator, contains C-terminal CBS domains
[Cylindrospermum stagnale PCC 7417]
gi|428261187|gb|AFZ27137.1| putative transcriptional regulator, contains C-terminal CBS domains
[Cylindrospermum stagnale PCC 7417]
Length = 152
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 13/156 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT P E + A++ L EKRI+G PV+DD KLVG++S+ DL+
Sbjct: 4 TVADVMTCD-------PIVVRRETPLKEAIQTLAEKRISGLPVVDDVEKLVGIISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G MF +DS N ++ L K G+ VG++M+ P+ + L
Sbjct: 57 WQET--GVTPPAYIMF--LDSVIYLQNPATYERDLHKALGQTVGEVMSKNPITISPDKTL 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+AA+L+ + RLPV+D+ G+++GI+TRG+++R+
Sbjct: 113 REAAKLMHDRSIHRLPVLDSAGQVIGILTRGDIIRS 148
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MT P+VVR T L++A + L E + LPVVD KLVGII+ +++
Sbjct: 3 KTVADVMTCDPIVVRRETPLKEAIQTLAEKRISGLPVVDDVEKLVGIISETDLM 56
>gi|427709353|ref|YP_007051730.1| putative signal transduction protein [Nostoc sp. PCC 7107]
gi|427361858|gb|AFY44580.1| putative signal transduction protein with CBS domains [Nostoc sp.
PCC 7107]
Length = 164
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 89/154 (57%), Gaps = 9/154 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M+ + VV+ T + EA ++IL EKRI+G PV+DD KLVG++S+ DL+
Sbjct: 16 TVADVMS--RDPIVVRAETPLKEA-----IKILAEKRISGLPVVDDVGKLVGIISETDLM 68
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ G MF + K + L K G+ VG++M+ V + L++
Sbjct: 69 WQET--GVTPPAYIMFLDSVIYLKNPATYDRDLHKALGQTVGEVMSKNAVTISPNKTLKE 126
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
AA+++ RLPV+D +G++VGI+TRG+V+RA
Sbjct: 127 AAQMMHNRNVHRLPVLDTEGQVVGILTRGDVIRA 160
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 170 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
N V K +SKT V D+M+ P+VVR T L++A ++L E + LPVVD GKLVGII
Sbjct: 7 NGVCKQMSKT----VADVMSRDPIVVRAETPLKEAIKILAEKRISGLPVVDDVGKLVGII 62
Query: 230 TRGNVV 235
+ +++
Sbjct: 63 SETDLM 68
>gi|425466366|ref|ZP_18845667.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9809]
gi|389831135|emb|CCI26307.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9809]
Length = 170
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 87/154 (56%), Gaps = 10/154 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT P T + A++IL EKR +G PV+DD+ +L+G++S+ DL+
Sbjct: 19 TVADIMTPN-------PITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLM 71
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ +G M + + + +KLL K G+ VG++MT P+ + L++
Sbjct: 72 WQE--TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKE 129
Query: 204 AARLLLETKYRRLPVVDAD-GKLVGIITRGNVVR 236
AA L+ + RRLPV++ + K++GIITRG+++R
Sbjct: 130 AASLMYDRHVRRLPVIEEETHKVIGIITRGDIIR 163
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 18 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLM 71
>gi|425440870|ref|ZP_18821165.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9717]
gi|389718595|emb|CCH97477.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9717]
Length = 170
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 87/154 (56%), Gaps = 10/154 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT P T + A++IL EKR +G PV+DD+ +L+G++S+ DL+
Sbjct: 19 TVADIMTPN-------PITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLM 71
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ +G M + + + +KLL K G+ VG++MT P+ + L++
Sbjct: 72 WQE--TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKE 129
Query: 204 AARLLLETKYRRLPVVDAD-GKLVGIITRGNVVR 236
AA L+ + RRLPV++ + K++GIITRG+++R
Sbjct: 130 AASLMYDRHVRRLPVIEEETHKVIGIITRGDIIR 163
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 18 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLM 71
>gi|425444260|ref|ZP_18824315.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9443]
gi|425454352|ref|ZP_18834098.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9807]
gi|389730388|emb|CCI05322.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9443]
gi|389804998|emb|CCI15532.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9807]
Length = 155
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 87/154 (56%), Gaps = 10/154 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT P T + A++IL EKR +G PV+DD+ +L+G++S+ DL+
Sbjct: 4 TVADIMTPN-------PITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ +G M + + + +KLL K G+ VG++MT P+ + L++
Sbjct: 57 WQE--TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKE 114
Query: 204 AARLLLETKYRRLPVVDAD-GKLVGIITRGNVVR 236
AA L+ + RRLPV++ + K++GIITRG+++R
Sbjct: 115 AASLMYDRHVRRLPVIEEETHKVIGIITRGDIIR 148
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 3 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLM 56
>gi|434399856|ref|YP_007133860.1| CBS domain containing membrane protein [Stanieria cyanosphaera PCC
7437]
gi|428270953|gb|AFZ36894.1| CBS domain containing membrane protein [Stanieria cyanosphaera PCC
7437]
Length = 153
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 90/155 (58%), Gaps = 13/155 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT+ V+ P T + EA ++IL E +I+G PV+D+ KLVG++S+ DL+
Sbjct: 4 TVADVMTSSPI--VITPQTALKEA-----IKILAEHKISGLPVVDEAGKLVGVLSETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G M +DS N +K + K G+ V ++M+ P+ ++ ++
Sbjct: 57 WQET--GVDPPPYIML--LDSVIYLQNPARYEKEIHKALGQTVAEVMSDRPITIKPHQSV 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
++AA L+ E + RRLPV+D +VGIIT+G+++R
Sbjct: 113 KEAAHLMHEKRIRRLPVIDEHNHIVGIITQGDIIR 147
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MT +P+V+ T L++A ++L E K LPVVD GKLVG+++ +++
Sbjct: 3 KTVADVMTSSPIVITPQTALKEAIKILAEHKISGLPVVDEAGKLVGVLSETDLM 56
>gi|422302415|ref|ZP_16389778.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9806]
gi|159028228|emb|CAO88038.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|389788411|emb|CCI16008.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9806]
Length = 155
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 87/154 (56%), Gaps = 10/154 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT P T + A++IL EKR +G PV+DD+ +L+G++S+ DL+
Sbjct: 4 TVADIMTPN-------PITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ +G M + + + +KLL K G+ VG++MT P+ + L++
Sbjct: 57 WQE--TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKE 114
Query: 204 AARLLLETKYRRLPVVDAD-GKLVGIITRGNVVR 236
AA L+ + RRLPV++ + K++GI+TRG+++R
Sbjct: 115 AASLMYDRHVRRLPVIEEETHKVIGIVTRGDIIR 148
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 3 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLM 56
>gi|427716841|ref|YP_007064835.1| putative signal transduction protein [Calothrix sp. PCC 7507]
gi|427349277|gb|AFY32001.1| putative signal transduction protein with CBS domains [Calothrix
sp. PCC 7507]
Length = 154
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 87/154 (56%), Gaps = 9/154 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M+ P E + A++IL E+RI+G PV+DD +LVG++S+ DL+
Sbjct: 4 TVDDVMSRN-------PIVVRTETPLKEAIQILAERRISGLPVVDDAGQLVGIISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ G MF + + + ++ L K G+ VG++M+ P+ + + +
Sbjct: 57 WQQT--GVTPPAYIMFLDSVIYLQNPGDYERDLHKALGQTVGEVMSKNPITISPEKTVRE 114
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
AA+++ + RLPV+D+ G+++GI+TRG++VRA
Sbjct: 115 AAKIMHDRHVHRLPVLDSAGQVIGILTRGDIVRA 148
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+M+ P+VVR T L++A ++L E + LPVVD G+LVGII+ +++
Sbjct: 3 KTVDDVMSRNPIVVRTETPLKEAIQILAERRISGLPVVDDAGQLVGIISETDLM 56
>gi|22299345|ref|NP_682592.1| hypothetical protein tll1802 [Thermosynechococcus elongatus BP-1]
gi|22295528|dbj|BAC09354.1| CBS domain protein [Thermosynechococcus elongatus BP-1]
Length = 156
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 27/172 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MT P T +A + A+ ++ EK++ G PV+DD KLVGLVS+ DL+
Sbjct: 5 VRDYMTPN-------PFTISADAPISEAVRLMEEKQVRGLPVVDDKGKLVGLVSEADLIV 57
Query: 145 LDSISGSGRADNSMFPEVDSTW-------KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 197
++ + P + T+ ++ + L KT G+ V D+MTP P +
Sbjct: 58 REA---------PLEPPLYITFLGSIIYFESPESFHQHLKKTLGQQVQDVMTPNPHTINV 108
Query: 198 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 249
+ +AARL++ RLPV++ G+LVGII+R +++RA HA E A
Sbjct: 109 DAPISEAARLMVNHHISRLPVLNDQGELVGIISRHDLLRAL----HAQEASA 156
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN-VVRAA 238
+V D MTP P + + +A RL+ E + R LPVVD GKLVG+++ + +VR A
Sbjct: 4 LVRDYMTPNPFTISADAPISEAVRLMEEKQVRGLPVVDDKGKLVGLVSEADLIVREA 60
>gi|282899529|ref|ZP_06307493.1| Predicted signal transduction protein containing CBS domain
proteins [Cylindrospermopsis raciborskii CS-505]
gi|281195408|gb|EFA70341.1| Predicted signal transduction protein containing CBS domain
proteins [Cylindrospermopsis raciborskii CS-505]
Length = 152
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 91/155 (58%), Gaps = 13/155 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV MT + V P T + +A ++IL EK+++G PV+DD KLVG++S+ DL+
Sbjct: 4 TVAQVMTHNPIM--VNPQTPLKQA-----IQILAEKQVSGLPVVDDMGKLVGIISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G MF +DS N ++ L K G+ VG++M+ P+ + +L
Sbjct: 57 WQET--GITPPAYIMF--LDSVIYLQNPATYERDLHKALGQTVGEVMSNNPITISPDQSL 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+ AA+++ + K RRLPVVD G ++GI+TRG+++R
Sbjct: 113 KTAAKIIQDHKVRRLPVVDDAGTVIGILTRGDIIR 147
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V +MT P++V T L+ A ++L E + LPVVD GKLVGII+ +++
Sbjct: 3 KTVAQVMTHNPIMVNPQTPLKQAIQILAEKQVSGLPVVDDMGKLVGIISETDLM 56
>gi|425468697|ref|ZP_18847691.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9701]
gi|389884638|emb|CCI35074.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9701]
Length = 170
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 86/154 (55%), Gaps = 10/154 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
T+ D MT P T + A++IL EKR +G PV+DD +L+G++S+ DL+
Sbjct: 19 TIADIMTPN-------PITVTANTSLSEAVKILAEKRFSGLPVVDDKMRLIGVISETDLM 71
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ +G M + + + +KLL K G+ VG++MT P+ + L++
Sbjct: 72 WQE--TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKE 129
Query: 204 AARLLLETKYRRLPVVDAD-GKLVGIITRGNVVR 236
AA L+ + RRLPV++ + K++GIITRG+++R
Sbjct: 130 AASLMYDRHVRRLPVIEEETHKVIGIITRGDIIR 163
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K + D+MTP P+ V T+L +A ++L E ++ LPVVD +L+G+I+ +++
Sbjct: 18 KTIADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDKMRLIGVISETDLM 71
>gi|425434032|ref|ZP_18814504.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9432]
gi|425451953|ref|ZP_18831772.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
7941]
gi|425458721|ref|ZP_18838209.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9808]
gi|389678231|emb|CCH92908.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9432]
gi|389766445|emb|CCI07898.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
7941]
gi|389825055|emb|CCI25515.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9808]
Length = 155
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 87/154 (56%), Gaps = 10/154 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT P T + A++IL EKR +G PV+DD+ +L+G++S+ DL+
Sbjct: 4 TVADIMTPN-------PITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ +G M + + + +KLL K G+ VG++MT P+ + L++
Sbjct: 57 WQE--TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKE 114
Query: 204 AARLLLETKYRRLPVVDAD-GKLVGIITRGNVVR 236
AA L+ + RRLPV++ + K++GI+TRG+++R
Sbjct: 115 AASLMYDRHVRRLPVIEEETHKVIGIVTRGDIIR 148
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 3 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLM 56
>gi|390437672|ref|ZP_10226201.1| IMP dehydrogenase [Microcystis sp. T1-4]
gi|389838870|emb|CCI30323.1| IMP dehydrogenase [Microcystis sp. T1-4]
Length = 155
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 87/149 (58%), Gaps = 5/149 (3%)
Query: 91 TKEELHVV--KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 148
TK H++ P T + A++IL EKR +G PV+DD+ +L+G++S+ DL+ +
Sbjct: 2 TKTVAHIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQE-- 59
Query: 149 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 208
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 60 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 119
Query: 209 LETKYRRLPVVDAD-GKLVGIITRGNVVR 236
+ RRLPV++ + K++GIITRG+++R
Sbjct: 120 YDRHVRRLPVIEEETHKVIGIITRGDIIR 148
>gi|218441822|ref|YP_002380151.1| hypothetical protein PCC7424_4929 [Cyanothece sp. PCC 7424]
gi|218174550|gb|ACK73283.1| CBS domain containing protein [Cyanothece sp. PCC 7424]
Length = 153
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 90/157 (57%), Gaps = 14/157 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT + V P T + EA ++++ EK I+G PV++D LVG++S+ DL+
Sbjct: 4 TVKDVMTPNP--YTVTPQTPLQEA-----IKLMAEKHISGLPVVNDQGLLVGVISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G +DS N + K + K G+ VG++M+ P+ V+ L
Sbjct: 57 WQET----GVETPPYIMILDSVIYLQNPARYDKEIHKALGQTVGEVMSDKPITVKPDQPL 112
Query: 202 EDAARLLLETKYRRLPVVD-ADGKLVGIITRGNVVRA 237
+AA+L+ + K RRLPV++ A GK++GIIT G+++RA
Sbjct: 113 REAAQLMHDKKIRRLPVIESAQGKVIGIITSGDIIRA 149
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MTP P V T L++A +L+ E LPVV+ G LVG+I+ +++
Sbjct: 3 KTVKDVMTPNPYTVTPQTPLQEAIKLMAEKHISGLPVVNDQGLLVGVISETDLM 56
>gi|427733825|ref|YP_007053369.1| putative contains C-terminal CBS domains [Rivularia sp. PCC 7116]
gi|427368866|gb|AFY52822.1| putative transcriptional regulator, contains C-terminal CBS domains
[Rivularia sp. PCC 7116]
Length = 154
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 85/151 (56%), Gaps = 6/151 (3%)
Query: 94 ELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 153
E+ P T + + A++IL EKRI+G PV+DD L+G++S+ DL+ +G
Sbjct: 7 EVMTSNPITVKTDTPLREAIKILAEKRISGLPVVDDAGHLIGIISETDLMW----QQAGV 62
Query: 154 ADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
+ F DS N E ++ L K G+ VG++M+ P+ + L +AA+++ +
Sbjct: 63 TPPAYFMIFDSVIYLKNPIEYERELHKALGQTVGEVMSQKPITISPDKPLREAAKIMRDR 122
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
K RLPVVD ++VGI++ G+++R Q++
Sbjct: 123 KIHRLPVVDDSEQIVGILSLGDIIRDMAQVE 153
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V ++MT P+ V+ T L +A ++L E + LPVVD G L+GII+ +++
Sbjct: 3 KNVSEVMTSNPITVKTDTPLREAIKILAEKRISGLPVVDDAGHLIGIISETDLM 56
>gi|428773730|ref|YP_007165518.1| hypothetical protein Cyast_1914 [Cyanobacterium stanieri PCC 7202]
gi|428688009|gb|AFZ47869.1| CBS domain containing membrane protein [Cyanobacterium stanieri PCC
7202]
Length = 153
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 88/154 (57%), Gaps = 9/154 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT P T + + A+ IL EK+++G PV+D + KLVG++S+ DL+
Sbjct: 4 TVADIMTPS-------PITVNPDTPLKEAITILAEKKLSGLPVVDKNNKLVGVISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ G M + + N +K + K G+ VG++MT + ++ +++
Sbjct: 57 WQET--GVEPPPYIMILDSVIYLQNPNRYEKEIHKALGQTVGEVMTNKAITIKSDDSVKR 114
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
AA++L E K RLPVVD +G +VGI+T+G++++A
Sbjct: 115 AAQILHEKKIGRLPVVDGNGNVVGIVTQGDIIQA 148
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
K V D+MTP+P+ V T L++A +L E K LPVVD + KLVG+I+
Sbjct: 2 NKTVADIMTPSPITVNPDTPLKEAITILAEKKLSGLPVVDKNNKLVGVISE 52
>gi|443663854|ref|ZP_21133242.1| CBS domain pair family protein [Microcystis aeruginosa DIANCHI905]
gi|443331736|gb|ELS46380.1| CBS domain pair family protein [Microcystis aeruginosa DIANCHI905]
Length = 147
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 82/138 (59%), Gaps = 3/138 (2%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T + A++IL EKR +G PV+DD+ +L+G++S+ DL+ + +G M
Sbjct: 5 PITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQE--TGVEAPPYIML 62
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
+ + + +KLL K G+ VG++MT P+ + L++AA L+ + RRLPV+
Sbjct: 63 LDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLMYDRHVRRLPVI 122
Query: 220 DAD-GKLVGIITRGNVVR 236
+ + K++GI+TRG+++R
Sbjct: 123 EEETHKVIGIVTRGDIIR 140
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 188 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 1 MTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLM 48
>gi|416393971|ref|ZP_11686062.1| Inosine-5'-monophosphate dehydrogenase [Crocosphaera watsonii WH
0003]
gi|357263398|gb|EHJ12414.1| Inosine-5'-monophosphate dehydrogenase [Crocosphaera watsonii WH
0003]
Length = 153
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 86/144 (59%), Gaps = 7/144 (4%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T + + A++I+ EKRI+G PV+D+ KL+G++S+ DL+ ++ G
Sbjct: 13 PITVTPQTPLSEAVKIIAEKRISGLPVVDEKGKLLGVISETDLMWQET----GVEPPPYI 68
Query: 160 PEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+DS N + K + K G+ VG++M+ P+ ++ T +L++AA ++ E K RRLP
Sbjct: 69 MILDSVIYLQNPARHDKEIHKALGQTVGEVMSDKPISIKATQSLKEAAHIMHEKKIRRLP 128
Query: 218 VVDADG-KLVGIITRGNVVRAALQ 240
V+D + ++GI+T+G+++R Q
Sbjct: 129 VLDENNTTVIGILTQGDIIRTMAQ 152
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V +MT P+ V T L +A +++ E + LPVVD GKL+G+I+ +++
Sbjct: 2 AKTVAQVMTQDPITVTPQTPLSEAVKIIAEKRISGLPVVDEKGKLLGVISETDLM 56
>gi|440752011|ref|ZP_20931214.1| CBS domain pair family protein [Microcystis aeruginosa TAIHU98]
gi|440176504|gb|ELP55777.1| CBS domain pair family protein [Microcystis aeruginosa TAIHU98]
Length = 147
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 82/138 (59%), Gaps = 3/138 (2%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T + A++IL EKR +G PV+DD+ +L+G++S+ DL+ + +G M
Sbjct: 5 PITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE--TGVEAPPYIML 62
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
+ + + +KLL K G+ VG++MT P+ + L++AA L+ + RRLPV+
Sbjct: 63 LDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLMYDRHVRRLPVI 122
Query: 220 DAD-GKLVGIITRGNVVR 236
+ + K++GI+TRG+++R
Sbjct: 123 EEETHKVIGIVTRGDIIR 140
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 188 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
MTP P+ V T+L +A ++L E ++ LPVVD + +L+G+I+ +++
Sbjct: 1 MTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLM 48
>gi|298529782|ref|ZP_07017185.1| CBS domain containing membrane protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511218|gb|EFI35121.1| CBS domain containing membrane protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 157
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS- 147
MTT E+L P E + A+ +L+EK I G PV+D + LVG++ DL+A+
Sbjct: 1 MTTAEDLMTSDPIRVHPETDISEAIHLLLEKNINGVPVVDQEDNLVGIICQSDLVAMQKK 60
Query: 148 --ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 205
+ +S+ P + ST K E++K+ + V D MTP PV V++ T LE+ A
Sbjct: 61 IPLPSMFTVLDSILP-LGSTAKMDREIKKIAATR----VEDAMTPEPVAVKKDTPLEELA 115
Query: 206 RLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
++++ KY LPV + GKLVG++ + +V++
Sbjct: 116 EIMVDKKYHTLPVTEG-GKLVGVVGKSDVLK 145
>gi|254410111|ref|ZP_05023891.1| hypothetical protein MC7420_7869 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196183147|gb|EDX78131.1| hypothetical protein MC7420_7869 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 156
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 6/142 (4%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T + + A++IL E+RI+G V++D KLVG++S+ DLL +G
Sbjct: 13 PITVSPQTPIREAMKILAERRISGLLVVNDVGKLVGIISETDLLW----QQTGVEPPVYI 68
Query: 160 PEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+DS N ++ L K G+ VG++MT APVVV+ L AA+L+ + RRL
Sbjct: 69 VFLDSVIYLENPARYEEELHKALGQTVGEVMTHAPVVVKPDQPLRKAAKLMQDKSLRRLA 128
Query: 218 VVDADGKLVGIITRGNVVRAAL 239
V D GK++G++T G++VRA +
Sbjct: 129 VTDNQGKVIGVLTAGDIVRAMI 150
>gi|389690008|ref|ZP_10179025.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
gi|388589526|gb|EIM29814.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
Length = 230
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 90/157 (57%), Gaps = 21/157 (13%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
T D MTT + V+P ++ E ++L + I+G PV+ D+ +L+G+VS+ DL+
Sbjct: 3 TAADVMTTA--VITVRPEMSIHEIA-----KLLCDHHISGVPVVGDNGQLLGIVSEGDLI 55
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLL----SKTNGKMVGDLMTPAPVVVRETT 199
++G R S W+TF K+L +K++G+ D+MT V V ETT
Sbjct: 56 GHAGLAGEQR---------RSWWQTFLSGPKVLAQHYAKSHGRTASDVMTKEVVTVLETT 106
Query: 200 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
++ D AR L + + +RLPV+ +G+L+GI+TR N+++
Sbjct: 107 SVADTARALEQHRIKRLPVL-RNGRLIGIVTRSNLLQ 142
>gi|427414934|ref|ZP_18905121.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
gi|425755587|gb|EKU96452.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
Length = 173
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 23/162 (14%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
Y V D MT + P T V T L+ L E I+G PV+DDD K+VG++S+ DL
Sbjct: 5 YLVKDLMT-------LNPVTVKPFDLVETVLQHLEENHISGLPVVDDDGKVVGVISEADL 57
Query: 143 LALD-------SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV 195
L + ++ G N + E +K + L KT G +V D+MT P+ +
Sbjct: 58 LFRERPIKLPLYLNFLG---NFFYLEPPGKFK------QQLRKTLGVLVQDVMTANPITI 108
Query: 196 RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ AA ++E + RLPV+D G+LVGIITR ++++A
Sbjct: 109 APDMPIATAANFMIEKRVNRLPVIDNQGQLVGIITREDLLKA 150
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 179 TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
T +V DLMT PV V+ +E + L E LPVVD DGK+VG+I+ +++
Sbjct: 2 TYNYLVKDLMTLNPVTVKPFDLVETVLQHLEENHISGLPVVDDDGKVVGVISEADLLFRE 61
Query: 239 LQIK 242
IK
Sbjct: 62 RPIK 65
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
+++ P T + + TA ++EKR+ PVID+ +LVG+++ DLL +
Sbjct: 98 QDVMTANPITIAPDMPIATAANFMIEKRVNRLPVIDNQGQLVGIITREDLLKALKTESAP 157
Query: 153 RAD 155
AD
Sbjct: 158 EAD 160
>gi|354566510|ref|ZP_08985682.1| CBS domain containing membrane protein [Fischerella sp. JSC-11]
gi|353545526|gb|EHC14977.1| CBS domain containing membrane protein [Fischerella sp. JSC-11]
Length = 155
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 82/159 (51%), Gaps = 21/159 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MTT VKPT +V+ T L L E I+G PV+D+ K+VG+VS+ DLL
Sbjct: 8 VKDLMTTDP--VTVKPTDSVE-----TVLRCLEENHISGLPVVDETGKVVGVVSEADLLF 60
Query: 145 LDSISGSGRADNSMFPEVDS------TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 198
R P S + + + L K+ G +V D+MTP P+ +
Sbjct: 61 --------RERPVRLPLYLSFLGGIIYLEPLDHFVQQLKKSLGILVQDVMTPDPITIAPD 112
Query: 199 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ AA L+LE + RLPVVD G LVGIITR +++RA
Sbjct: 113 APISQAADLMLEKRVNRLPVVDETGALVGIITRDDLLRA 151
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 179 TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
T + V DLMT PV V+ T ++E R L E LPVVD GK+VG+++ +++
Sbjct: 3 TETRQVKDLMTTDPVTVKPTDSVETVLRCLEENHISGLPVVDETGKVVGVVSEADLL 59
>gi|428315835|ref|YP_007113717.1| putative signal transduction protein with CBS domains [Oscillatoria
nigro-viridis PCC 7112]
gi|428239515|gb|AFZ05301.1| putative signal transduction protein with CBS domains [Oscillatoria
nigro-viridis PCC 7112]
Length = 166
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 92/156 (58%), Gaps = 13/156 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M+ E + +P ++EA ++IL ++RI+G PV+D++ LVG++S+ DL+
Sbjct: 17 TVADVMS--REPILARPEMPLNEA-----IKILADRRISGLPVVDENDLLVGVISETDLM 69
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
+S G + +DS N ++ L K G+ VG+ M+ PV + ++
Sbjct: 70 WRES----GVTPPAYIMVLDSVIYLENPSRYERELHKALGQTVGEAMSTDPVTIGPDKSV 125
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+AA+L+ + RLPVVD+ GK++GI+TRG+++R+
Sbjct: 126 PEAAKLMHDRSIHRLPVVDSAGKVIGILTRGDIIRS 161
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+M+ P++ R L +A ++L + + LPVVD + LVG+I+ +++
Sbjct: 16 KTVADVMSREPILARPEMPLNEAIKILADRRISGLPVVDENDLLVGVISETDLM 69
>gi|334118778|ref|ZP_08492866.1| putative signal transduction protein with CBS domains [Microcoleus
vaginatus FGP-2]
gi|333459008|gb|EGK87623.1| putative signal transduction protein with CBS domains [Microcoleus
vaginatus FGP-2]
Length = 166
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 92/156 (58%), Gaps = 13/156 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M+ E + +P ++EA ++IL +RI+G PV+D++ LVG++S+ DL+
Sbjct: 17 TVADVMS--REPILARPEMPLNEA-----IKILANRRISGLPVVDENDLLVGVISETDLM 69
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G + +DS N ++ L K G+ VG+ M+ P+ + ++
Sbjct: 70 WRET----GVTPPAYIMVLDSVIYLENPSRYERDLHKALGQTVGEAMSKEPITIGPDKSV 125
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
++AA+L+ + RLPVVD+ GK++GI+TRG+++R+
Sbjct: 126 QEAAKLMHDRSIHRLPVVDSAGKVIGILTRGDIIRS 161
>gi|443316995|ref|ZP_21046419.1| CBS-domain-containing membrane protein [Leptolyngbya sp. PCC 6406]
gi|442783400|gb|ELR93316.1| CBS-domain-containing membrane protein [Leptolyngbya sp. PCC 6406]
Length = 163
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 10/154 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT P T A + A++I+ ++RI+G PVI + LVG++S+ DL+
Sbjct: 4 TVADVMTRD-------PITVGSNALLQEAIQIMADQRISGLPVISAEGSLVGILSETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE-TTNLE 202
+G+ M + K + L K G+ V ++M+ PVV + +L
Sbjct: 57 W--QATGAPLPAYVMLLDSVIYLKNPTRFNQELHKALGQTVAEVMSDHPVVTTQPEASLR 114
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
AA+L+ + + RRLPV+D G LVGI+TRG++VR
Sbjct: 115 AAAQLMHDKQVRRLPVLDDSGSLVGILTRGDIVR 148
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+ V D+MT P+ V L++A +++ + + LPV+ A+G LVGI++ +++ A
Sbjct: 3 RTVADVMTRDPITVGSNALLQEAIQIMADQRISGLPVISAEGSLVGILSETDLMWQA 59
>gi|186685839|ref|YP_001869035.1| signal transduction protein [Nostoc punctiforme PCC 73102]
gi|186468291|gb|ACC84092.1| putative signal transduction protein with CBS domains [Nostoc
punctiforme PCC 73102]
Length = 154
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 88/154 (57%), Gaps = 9/154 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M+ + VV+ T + EA ++IL E+ I+G PV+DD KLVG++S+ DL+
Sbjct: 4 TVADVMS--RDPIVVRAETPLKEA-----IQILAERHISGLPVVDDVGKLVGIISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ G MF + K ++ L K G+ VG++M+ P+ + L++
Sbjct: 57 WQET--GVTPPAYIMFLDSVIYLKNPATYERDLHKALGQTVGEVMSKNPIAISPDKTLKE 114
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
AA ++ + RLPV+D +++GI+TRG+++RA
Sbjct: 115 AATIMHDRSVHRLPVLDGTDQVIGILTRGDIIRA 148
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+M+ P+VVR T L++A ++L E LPVVD GKLVGII+ +++
Sbjct: 3 KTVADVMSRDPIVVRAETPLKEAIQILAERHISGLPVVDDVGKLVGIISETDLM 56
>gi|376001640|ref|ZP_09779503.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|423062573|ref|ZP_17051363.1| putative signal transduction protein with CBS domain protein
[Arthrospira platensis C1]
gi|375330027|emb|CCE15256.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|406715908|gb|EKD11060.1| putative signal transduction protein with CBS domain protein
[Arthrospira platensis C1]
Length = 164
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 14/162 (8%)
Query: 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLV 137
P + TV D MT P +A + A+ +L + RI G PV+D+ KLVG +
Sbjct: 5 PDTMAKTVADVMTPN-------PLVISPDAPLADAIALLAQNRIGGLPVMDNTGKLVGFI 57
Query: 138 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVV- 194
S+ D++ SG + +DS N +K L K G+ VGD+M+ P++
Sbjct: 58 SETDIIW----QQSGVTPPAYITILDSVIYLENPSRYEKELHKALGQTVGDVMSNGPMIT 113
Query: 195 VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
++ +L +AARL+ + + RLPV+D KL+GI+T G+++R
Sbjct: 114 IKPDCSLSEAARLMNQKQVHRLPVLDGSKKLIGILTCGDIIR 155
>gi|56752279|ref|YP_172980.1| hypothetical protein syc2270_d [Synechococcus elongatus PCC 6301]
gi|81300633|ref|YP_400841.1| hypothetical protein Synpcc7942_1824 [Synechococcus elongatus PCC
7942]
gi|24251259|gb|AAN46179.1| unknown protein [Synechococcus elongatus PCC 7942]
gi|56687238|dbj|BAD80460.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81169514|gb|ABB57854.1| CBS [Synechococcus elongatus PCC 7942]
Length = 154
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 14/160 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV DFMT + VKP T + EA + IL +K I+G PV+D+ +LVG++S+ DL+
Sbjct: 4 TVADFMT--RDPISVKPQTPLTEA-----IRILADKHISGLPVVDEAGQLVGVLSETDLM 56
Query: 144 ALDSISGSGRADNSMFPEV-DSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
+S G + +V DS N ++ L K G+ V ++MT P+ +
Sbjct: 57 WRES----GVPTPPPYIQVLDSFIYLENPARYEQELHKALGETVAEVMTAQPLTIAADRP 112
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
L +AARL + K RL V+ D ++VG+ITRG+++RA Q
Sbjct: 113 LPEAARLFNDRKVHRLFVLSGDHQVVGVITRGDIIRAMAQ 152
>gi|209527145|ref|ZP_03275658.1| putative signal transduction protein with CBS domains [Arthrospira
maxima CS-328]
gi|209492394|gb|EDZ92736.1| putative signal transduction protein with CBS domains [Arthrospira
maxima CS-328]
Length = 157
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 84/156 (53%), Gaps = 14/156 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT P +A + A+ +L + RI G PV+D+ KLVG +S+ D++
Sbjct: 4 TVADVMTPN-------PLVISPDAPLADAIALLAQNRIGGLPVMDNTGKLVGFISETDII 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVV-VRETTN 200
SG + +DS N +K L K G+ VGD+M+ P++ ++ +
Sbjct: 57 W----QQSGVTPPAYITILDSVIYLENPSRYEKELHKALGQTVGDVMSNGPMITIKPDCS 112
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
L +AARL+ + + RLPV+D KL+GI+T G+++R
Sbjct: 113 LSEAARLMNQKQVHRLPVLDGSKKLIGILTCGDIIR 148
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MTP P+V+ L DA LL + + LPV+D GKLVG I+ +++
Sbjct: 3 KTVADVMTPNPLVISPDAPLADAIALLAQNRIGGLPVMDNTGKLVGFISETDII 56
>gi|409991489|ref|ZP_11274746.1| signal transduction protein [Arthrospira platensis str. Paraca]
gi|291567536|dbj|BAI89808.1| hypothetical protein [Arthrospira platensis NIES-39]
gi|409937646|gb|EKN79053.1| signal transduction protein [Arthrospira platensis str. Paraca]
Length = 157
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 84/156 (53%), Gaps = 14/156 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT P +A + A+ +L + RI G PV+D+ KLVG +S+ D++
Sbjct: 4 TVADVMTPN-------PLVISPDAPLTDAIALLAQNRIGGLPVMDNTGKLVGFISETDII 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVV-VRETTN 200
SG + +DS N +K L K G+ VGD+M+ P++ ++ +
Sbjct: 57 W----QQSGVTPPAYITILDSVIYLENPSRYEKELHKALGQTVGDVMSNGPMITIKPDCS 112
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
L +AARL+ + + RLPV+D KL+GI+T G+++R
Sbjct: 113 LSEAARLMNQKQVHRLPVLDGSKKLIGILTCGDIIR 148
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MTP P+V+ L DA LL + + LPV+D GKLVG I+ +++
Sbjct: 3 KTVADVMTPNPLVISPDAPLTDAIALLAQNRIGGLPVMDNTGKLVGFISETDII 56
>gi|359457519|ref|ZP_09246082.1| CBS domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 163
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 23/160 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT + PT ++++ ++++ + RI+G PV+D +VG++S+ DLL
Sbjct: 8 VKDFMTPDPI--TISPTDSIEKV-----IKLIEDHRISGMPVVDASNHVVGIISEGDLLV 60
Query: 145 LDSISGSGRADNSMFPEVDST-------WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 197
+S M P + T +++ + + + K G +V D+MT P+ +
Sbjct: 61 RES---------PMQPPLYMTLLGSVIYFESPKQFHQHMQKALGMLVQDVMTSQPITTKP 111
Query: 198 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
L AA L+L K RLPVVD D L+GIITR ++VRA
Sbjct: 112 DIPLTSAANLMLSKKINRLPVVDNDQYLIGIITRHDLVRA 151
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
+V D MTP P+ + T ++E +L+ + + +PVVDA +VGII+ G+++
Sbjct: 7 VVKDFMTPDPITISPTDSIEKVIKLIEDHRISGMPVVDASNHVVGIISEGDLL 59
>gi|327400007|ref|YP_004340846.1| CBS domain-containing protein [Archaeoglobus veneficus SNP6]
gi|327315515|gb|AEA46131.1| CBS domain containing protein [Archaeoglobus veneficus SNP6]
Length = 260
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 40/156 (25%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
VGD+MT + + + P TVDEA +E++ + GFPV+DD K++G +S DL
Sbjct: 5 VGDYMT--KNVITLSPDNTVDEA-----IELIQKTGHDGFPVVDDSGKVIGYISSRDL-- 55
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
L K +GD+M+ V RE +L DA
Sbjct: 56 -------------------------------LKKDPNTKIGDIMSKQLYVAREYMDLRDA 84
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
AR++ T + +LPVVD DG+L+GII+ +V+R+ ++
Sbjct: 85 ARVMFRTGHSKLPVVDDDGRLLGIISNADVIRSQIE 120
>gi|52632000|gb|AAU85400.1| inosine-5'-monophosphate dehydrogenase [uncultured archaeon
GZfos12E1]
Length = 166
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 24/174 (13%)
Query: 89 MTTKEELHVVKPTTTVDEAF-----VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
M TK + V + TT AF +P ++ RI+G PVIDD K++G++S+ D++
Sbjct: 1 MQTKTNVKVKELMTTDVIAFKPGEKIPHVVKAFRTNRISGAPVIDDQRKVIGIISEADIM 60
Query: 144 ALDSISGSGRADNSMFPEVD-----------STWKTFNEVQKLLSKTNGKMVGDLMTPAP 192
L + FP++D S K ++ + V D+MT
Sbjct: 61 KLTA--------TVPFPDIDPLNPFPVFSLSSYMKKVKKIPDEIETLFEGYVKDVMTKKT 112
Query: 193 VVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
V + ++ DAARL+ + ++R+PVVD +GKLVG+I RG+V+ + H+ +
Sbjct: 113 VTISPDNSISDAARLMHKNDFKRIPVVDDEGKLVGVIARGDVIGVFAKYSHSKK 166
>gi|158333240|ref|YP_001514412.1| hypothetical protein AM1_0009 [Acaryochloris marina MBIC11017]
gi|158339481|ref|YP_001520658.1| hypothetical protein AM1_6410 [Acaryochloris marina MBIC11017]
gi|158303481|gb|ABW25098.1| CBS domain protein [Acaryochloris marina MBIC11017]
gi|158309722|gb|ABW31339.1| CBS domain protein [Acaryochloris marina MBIC11017]
Length = 163
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 23/160 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT + PT +++ ++++ + RI+G PV+D +VG++S+ DLL
Sbjct: 8 VKDFMTPDPI--TISPTDSIERV-----IKLIEDHRISGMPVVDASNHVVGIISEGDLLV 60
Query: 145 LDSISGSGRADNSMFPEVDST-------WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 197
+S M P + T +++ + + + K G +V D+MT P+ +
Sbjct: 61 RES---------PMQPPLYMTLLGSVIYFESPKQFHQHMQKALGMLVQDVMTSQPITTKP 111
Query: 198 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
L AA L+L K RLPVVD D L+GIITR ++VRA
Sbjct: 112 DIPLTSAANLMLSKKINRLPVVDNDQYLIGIITRHDLVRA 151
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
+V D MTP P+ + T ++E +L+ + + +PVVDA +VGII+ G+++
Sbjct: 7 VVKDFMTPDPITISPTDSIERVIKLIEDHRISGMPVVDASNHVVGIISEGDLL 59
>gi|217076999|ref|YP_002334715.1| hypothetical protein THA_915 [Thermosipho africanus TCF52B]
gi|419759571|ref|ZP_14285865.1| hypothetical protein H17ap60334_01401 [Thermosipho africanus
H17ap60334]
gi|217036852|gb|ACJ75374.1| CBS domain containing membrane protein [Thermosipho africanus
TCF52B]
gi|407515391|gb|EKF50149.1| hypothetical protein H17ap60334_01401 [Thermosipho africanus
H17ap60334]
Length = 147
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 84/147 (57%), Gaps = 10/147 (6%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDSISG 150
++ ++ T +++ V L+IL +++TG PVID+D+K+VG +S+ D++ AL S
Sbjct: 4 KDFYIRDITAVLEDESVSRVLKILSRQQVTGVPVIDEDYKVVGFISENDIIRAALPS-YF 62
Query: 151 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 210
S S P+ N+ + L K + + V ++MT + ++E+T L AA L++
Sbjct: 63 SLLQTASFIPD-------LNQFVRNLKKISNRAVSEIMTKPAITIKESTPLLHAADLMIR 115
Query: 211 TKYRRLPVVDADGKLVGIITRGNVVRA 237
+ LPVVD D KL+G+ITR ++ A
Sbjct: 116 HSLKILPVVDEDDKLLGVITRMKILEA 142
>gi|15678671|ref|NP_275786.1| hypothetical protein MTH644 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621725|gb|AAB85149.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 157
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 14/150 (9%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
VK T+++ +A +L E RI+G PV+D+D KLVG++S+ D++ L I + N
Sbjct: 15 VKRTSSIHDAA-----RVLRENRISGAPVVDEDGKLVGIISEGDIMRL--IEVHSPSLNL 67
Query: 158 MFP------EVDSTWK-TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 210
+ P E+ K ++E+ + + K V ++MTP V V ++ DAA L+
Sbjct: 68 IMPSPLDLLELPLRMKHEYDEIARGIRKAAVMRVEEIMTPKVVTVPPHASVSDAAELMER 127
Query: 211 TKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+RLPV+D +G+L GIITRG+++ A ++
Sbjct: 128 HDIKRLPVIDENGRLAGIITRGDIIGAFVK 157
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
V D M + V+ T+++ DAAR+L E + PVVD DGKLVGII+ G+++R
Sbjct: 4 VKDAMQSDVITVKRTSSIHDAARVLRENRISGAPVVDEDGKLVGIISEGDIMR 56
>gi|225174422|ref|ZP_03728421.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
gi|225170207|gb|EEG79002.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
Length = 148
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 8/135 (5%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS- 164
EA + ILVE RI+G PV+D + ++VG+V++ DL+ D + F E+
Sbjct: 17 EATINDVAAILVEHRISGVPVVDKEQRVVGMVTEGDLIHQDK-----KLHTPAFLEILGG 71
Query: 165 --TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 222
+ V K L K V ++MT V+E T +ED A +++E + R+PVVDA
Sbjct: 72 VIYLENPQRVAKDLEKMTATKVVEIMTRKVFTVKEDTPIEDIATMMVERQVNRVPVVDAA 131
Query: 223 GKLVGIITRGNVVRA 237
GKL GI++R ++V+A
Sbjct: 132 GKLTGIVSRQDLVKA 146
>gi|256811333|ref|YP_003128702.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
gi|256794533|gb|ACV25202.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
Length = 154
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
KP ++ + ++I E +I+G PV++ D KLVG++S+ D++ +I N +
Sbjct: 9 KPIVVYEDDDLEDVIKIFRENKISGAPVLNKDGKLVGIISESDIIK--TIVTHDEDLNLI 66
Query: 159 FPE----VDSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
P ++ KT E + L K V D+MT +V + + DAA+L++E
Sbjct: 67 LPSPLDLIELPLKTALKIEEFMEDLKKALKTKVKDMMTKKVIVAKPDMTVNDAAKLMVEH 126
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRAAL 239
+RLPVVD +G L+GI+TRG+++ A +
Sbjct: 127 NIKRLPVVDDEGNLIGIVTRGDLIEALI 154
>gi|218779499|ref|YP_002430817.1| hypothetical protein Dalk_1651 [Desulfatibacillum alkenivorans
AK-01]
gi|218760883|gb|ACL03349.1| CBS domain containing membrane protein [Desulfatibacillum
alkenivorans AK-01]
Length = 149
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 84/159 (52%), Gaps = 18/159 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MTT E+ +KP T + EA + L+E RI G PV+D+D K+VG++ DL+
Sbjct: 4 VSDIMTT--EVISLKPDTDISEA-----AKQLLENRINGAPVVDEDGKVVGILCQSDLI- 55
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM----VGDLMTPAPVVVRETTN 200
+ S F +DS + QK K KM V MT PVVV T
Sbjct: 56 ---VQQKRFPVPSFFTLLDSVIPLVS--QKHFEKEMEKMAAFKVSQAMTEKPVVVSPDTP 110
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
LED A L+++ K LPVVD+ GKLVG++ + +++R +
Sbjct: 111 LEDVAALMVDKKLHTLPVVDS-GKLVGVVGKEDILRTLM 148
>gi|411118891|ref|ZP_11391271.1| putative transcriptional regulator [Oscillatoriales cyanobacterium
JSC-12]
gi|410710754|gb|EKQ68261.1| putative transcriptional regulator [Oscillatoriales cyanobacterium
JSC-12]
Length = 156
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 14/156 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT + +P T +DE ++ L KRI+G PV+++D KLVG++S+ DL+
Sbjct: 4 TVADVMT--RDPITARPDTPLDEV-----IKTLAAKRISGLPVVNEDGKLVGIISETDLM 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVV-VRETTN 200
+S G +DS N + ++ L K G V D+MT VV + +
Sbjct: 57 WRES----GVTPPPYIMLLDSVIYLENPAKYERELHKALGSTVKDVMTDRHVVTIAPDKS 112
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
L DAA+L+ E RLPV+D + +++GI+TRG+++R
Sbjct: 113 LRDAAQLMHERGVHRLPVLDKEERVIGILTRGDIIR 148
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V D+MT P+ R T L++ + L + LPVV+ DGKLVGII+ +++
Sbjct: 3 KTVADVMTRDPITARPDTPLDEVIKTLAAKRISGLPVVNEDGKLVGIISETDLM 56
>gi|357475269|ref|XP_003607920.1| CBS domain-containing protein, putative [Medicago truncatula]
gi|355508975|gb|AES90117.1| CBS domain-containing protein, putative [Medicago truncatula]
Length = 110
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 44/63 (69%), Gaps = 5/63 (7%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDW 131
T NS ++G YTV DFMT K LHVVK TT+VDE ALE LV+ RI+G PVID++W
Sbjct: 51 TVNSVPRANGTYTVSDFMTKKHNLHVVKTTTSVDE-----ALEALVKNRISGLPVIDEEW 105
Query: 132 KLV 134
LV
Sbjct: 106 NLV 108
>gi|359784555|ref|ZP_09287725.1| hypothetical protein MOY_01724 [Halomonas sp. GFAJ-1]
gi|359298179|gb|EHK62397.1| hypothetical protein MOY_01724 [Halomonas sp. GFAJ-1]
Length = 229
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 78/132 (59%), Gaps = 7/132 (5%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
+A V ++L+E RI+ PV+DD+ +++G+VS+ DL+ + G R S + + +
Sbjct: 17 DAEVREIAQLLLEHRISAVPVVDDERRVLGIVSEGDLMR--RVKGDERQGRSWWLSLFTG 74
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
K E K++G+ ++MTP P+ V E T L ARLL + +R+PVV +GKL
Sbjct: 75 GKDPGE----YVKSHGRKAQEVMTPDPLCVEENTPLHTIARLLEKHHIKRVPVV-REGKL 129
Query: 226 VGIITRGNVVRA 237
VGI++R N+++
Sbjct: 130 VGIVSRANLLQG 141
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MTP + V + + A+LLLE + +PVVD + +++GI++ G+++R
Sbjct: 5 DIMTPKVISVGPDAEVREIAQLLLEHRISAVPVVDDERRVLGIVSEGDLMR 55
>gi|443243845|ref|YP_007377070.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Nonlabens dokdonensis DSW-6]
gi|442801244|gb|AGC77049.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Nonlabens dokdonensis DSW-6]
Length = 153
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 31/168 (18%)
Query: 75 SAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLV 134
+AA + V DFMT K L P + E ++IL+++RITG PV+D + +LV
Sbjct: 12 TAANVPQKFQVKDFMTRK--LITFSPDQGITEV-----MDILLKQRITGGPVVDANNQLV 64
Query: 135 GLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV 194
G++SD DL+ + G R N P ++V D M+ P
Sbjct: 65 GIISDTDLM---HVIGESRYHN--MP------------------VGNRLVSDYMSLQPAT 101
Query: 195 VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
+ E ++ DAA L+T +RR PV ++GKL+G I+R +V+ AA ++K
Sbjct: 102 IDEEADIFDAAARFLKTGHRRFPVT-SEGKLIGQISRMDVIIAATKLK 148
>gi|186475859|ref|YP_001857329.1| signal-transduction protein [Burkholderia phymatum STM815]
gi|184192318|gb|ACC70283.1| putative signal-transduction protein with CBS domains [Burkholderia
phymatum STM815]
Length = 230
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 20/159 (12%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MTT + P TTV EA L EK I+G PV+DD +LVG+V++ DLL
Sbjct: 5 DVMTTS--VVFAHPDTTVQEAA-----RALAEKHISGMPVVDDKGELVGMVTEGDLLHRA 57
Query: 147 SISGSGRADNSMFPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
I G+G + W F E+ K + V DLMT + V E T +
Sbjct: 58 EI-GTGVNKRAW-------WLDFLASTRELASEYIKEHSHKVSDLMTTDVITVTEDTPVS 109
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
D A LL + +R+PVV DGK+ G+++R N++RA I
Sbjct: 110 DIAELLERHRIKRVPVV-KDGKVTGLVSRANLIRALASI 147
>gi|352102837|ref|ZP_08959407.1| hypothetical protein HAL1_08912 [Halomonas sp. HAL1]
gi|350599688|gb|EHA15772.1| hypothetical protein HAL1_08912 [Halomonas sp. HAL1]
Length = 229
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 15/136 (11%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSISGSGRADNSMFPEVDS 164
+A V +L+ RI+ PV+D + +++G+VS+ DL+ ++ G GR S
Sbjct: 17 DAEVSEIARLLLHHRISAVPVVDAEHRVIGIVSEGDLMRRVEDDDGHGR----------S 66
Query: 165 TWKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 221
W T K S K++G+ ++MTP P+ V E T L ARLL + + +R+PVV
Sbjct: 67 WWLTLFAGGKSASDYVKSHGRKAHEVMTPNPMTVEENTPLHTIARLLEKHRIKRVPVV-R 125
Query: 222 DGKLVGIITRGNVVRA 237
DGKLVGI++R N+++
Sbjct: 126 DGKLVGIVSRANLLQG 141
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MTP V V + + ARLLL + +PVVDA+ +++GI++ G+++R
Sbjct: 5 DIMTPKVVSVGPDAEVSEIARLLLHHRISAVPVVDAEHRVIGIVSEGDLMR 55
>gi|218885382|ref|YP_002434703.1| hypothetical protein DvMF_0278 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756336|gb|ACL07235.1| CBS domain containing membrane protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 150
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 82/152 (53%), Gaps = 11/152 (7%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 148
M +++ P T E + A I+++++ G PV+D LVG++ DL+A
Sbjct: 1 MLLAKDIMTAAPVTVTPETGIAEAARIMIQRKFNGLPVVDGKGTLVGVICQSDLIA---- 56
Query: 149 SGSGRADN--SMFPEVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ N ++F +D ++ +++ + + K + VG MTP PV V T +++
Sbjct: 57 --QHKKLNLPTLFTVLDGFIPLRSMSDLDEEMRKISATNVGQAMTPDPVTVGPETPIDEV 114
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
A L++++KY LPVVDA G LVG+I + +V+R
Sbjct: 115 ASLMVDSKYHTLPVVDA-GSLVGVIGKEDVLR 145
>gi|413961463|ref|ZP_11400691.1| putative signal transduction protein [Burkholderia sp. SJ98]
gi|413930335|gb|EKS69622.1| putative signal transduction protein [Burkholderia sp. SJ98]
Length = 212
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 8/135 (5%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
+LV+ RI+ PV+D D ++VG++S+ DLL + I R S + +D
Sbjct: 7 LLVQHRISAAPVVDQDERVVGMISEGDLLHREEIGTEKRNRRSWW--LDMLGSDGGAADY 64
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
+ K++ VG++MT P+ V+E T+L D A +L +R+PV+ DG+LVGI++R N+
Sbjct: 65 I--KSHAPTVGEIMTREPICVKEDTSLADIAAVLESHHIKRVPVL-RDGRLVGIVSRSNL 121
Query: 235 VRA---ALQIKHATE 246
V+A AL ++ A E
Sbjct: 122 VQALASALAVEAAPE 136
>gi|357419743|ref|YP_004932735.1| hypothetical protein Tlie_0905 [Thermovirga lienii DSM 17291]
gi|355397209|gb|AER66638.1| CBS domain containing protein [Thermovirga lienii DSM 17291]
Length = 157
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 73/138 (52%), Gaps = 18/138 (13%)
Query: 101 TTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA------LDSISGSGRA 154
T ++ + AL +L +R++G PV+ DDW LVG +S+ D+L L+ ++ S
Sbjct: 16 TALSEDELIIDALHVLYSQRLSGVPVVRDDWVLVGFLSEKDILQGAVPTYLEVLAQSTFL 75
Query: 155 DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 214
D+ N +Q+L + K V DLMT PV V +L A L+L K +
Sbjct: 76 DDC----------EGNLLQRLCAMGKQK-VKDLMTKDPVYVTPEASLMTVADLMLRKKIK 124
Query: 215 RLPVVDADGKLVGIITRG 232
RLPVV DGKLVGII RG
Sbjct: 125 RLPVV-QDGKLVGIIDRG 141
>gi|427418510|ref|ZP_18908693.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
gi|425761223|gb|EKV02076.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
Length = 164
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 94 ELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 153
E+ P T E + A+++L RI+G PV+D + VG +S+ DL+ +SG+
Sbjct: 17 EMMTAPPLTATPEMSLKDAIQLLATHRISGLPVVDATGEAVGEISETDLMW--QVSGASL 74
Query: 154 ADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
M +DS N + + L K G+ V D+M+ VV+ +L+ AA+L+ +
Sbjct: 75 PAYVML--LDSIVYLTNPARYSQELHKALGQTVADVMSRKVTVVQADDDLQRAAQLMHDK 132
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+ RRL VVD D ++GI+TRG++VR Q
Sbjct: 133 QIRRLVVVDDDRHVIGILTRGDIVRELAQ 161
>gi|297617946|ref|YP_003703105.1| hypothetical protein Slip_1785 [Syntrophothermus lipocalidus DSM
12680]
gi|297145783|gb|ADI02540.1| CBS domain containing membrane protein [Syntrophothermus
lipocalidus DSM 12680]
Length = 149
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 85/155 (54%), Gaps = 18/155 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-- 144
D MT +E+ V+P +V+E +IL + RI+G PV+DD KLVG+V++ DL+
Sbjct: 5 DIMT--KEVITVRPEQSVEEV-----AKILADNRISGVPVVDDAGKLVGVVTESDLMIKA 57
Query: 145 --LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
L+ D+ +F + + + FNE L + V D+MT V E T L
Sbjct: 58 RDLELPFYITLFDSIIFLQ---SPRRFNE---ELKRFTASKVKDIMTTQVAAVDEDTPLF 111
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
D ARL+ R+PVV DGK+VGI+TR +VVRA
Sbjct: 112 DIARLMTAKSINRVPVV-RDGKVVGIVTRNDVVRA 145
>gi|187920240|ref|YP_001889271.1| hypothetical protein Bphyt_5546 [Burkholderia phytofirmans PsJN]
gi|187718678|gb|ACD19901.1| CBS domain containing membrane protein [Burkholderia phytofirmans
PsJN]
Length = 230
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 78/140 (55%), Gaps = 10/140 (7%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P +TV E +I V+ I+G PV+D D L+G++S+ DLL + I R+ S
Sbjct: 14 VHPDSTVREV-----AKIFVDNGISGAPVLDADGHLIGMISEGDLLRRNEIGTDERSRTS 68
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
D W +E + + KT+ V D+M+ V V+ T L + A +L + +R+P
Sbjct: 69 WL---DHLWSASHEARDYI-KTHATKVRDVMSTEVVTVQPGTPLGEVASILETRRIKRVP 124
Query: 218 VVDADGKLVGIITRGNVVRA 237
V +A G+LVGI++R N+V+A
Sbjct: 125 VTEA-GRLVGIVSRANLVQA 143
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 33/51 (64%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MT + + V + + + A++ ++ PV+DADG L+G+I+ G+++R
Sbjct: 5 DVMTRSVISVHPDSTVREVAKIFVDNGISGAPVLDADGHLIGMISEGDLLR 55
>gi|289192110|ref|YP_003458051.1| signal transduction protein with CBS domains [Methanocaldococcus
sp. FS406-22]
gi|288938560|gb|ADC69315.1| putative signal transduction protein with CBS domains
[Methanocaldococcus sp. FS406-22]
Length = 154
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
KP ++ + +++ E +I+G PV++ D KLVG++S+ D++ +I N +
Sbjct: 9 KPIVVYEDDDLIDVIKLFRENKISGAPVLNKDGKLVGIISESDIVK--TIVTHNEDLNLI 66
Query: 159 FPE----VDSTWKTFNEVQKLLSKTNGKM---VGDLMTPAPVVVRETTNLEDAARLLLET 211
P ++ +T ++++ + + V D+MT +V + + DAA+L++E
Sbjct: 67 LPSPLDLIELPLRTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVEN 126
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRAAL 239
+RLPVVD +G L+GI+TRG+++ A +
Sbjct: 127 NIKRLPVVDDEGNLIGIVTRGDLIEALI 154
>gi|333986774|ref|YP_004519381.1| CBS domain-containing membrane protein [Methanobacterium sp.
SWAN-1]
gi|333824918|gb|AEG17580.1| CBS domain containing membrane protein [Methanobacterium sp.
SWAN-1]
Length = 159
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 9/132 (6%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP------EVDSTWK-T 168
L + +I+G P++DDD K++G+VS+ D++ L + N + P E+ K
Sbjct: 28 LRDNKISGAPIVDDDGKVIGIVSEGDIMRLIEVHSPQM--NLILPSPLDWIELPLRMKHE 85
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
++E+ K L ++G++MT V V ++ D A L+ +RLPVVDAD KLVGI
Sbjct: 86 YDEITKGLKTAAKVLIGEIMTKKVVSVLPDASISDGAALMDSHDIKRLPVVDADKKLVGI 145
Query: 229 ITRGNVVRAALQ 240
+TRG+++ A ++
Sbjct: 146 VTRGDIIGAMVR 157
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+ D M + + T + D A+ L + K P+VD DGK++GI++ G+++R
Sbjct: 4 IQDAMEKNVIKFKSTDKIIDVAQSLRDNKISGAPIVDDDGKVIGIVSEGDIMR 56
>gi|163754304|ref|ZP_02161426.1| CBS domain protein, putative [Kordia algicida OT-1]
gi|161325245|gb|EDP96572.1| CBS domain protein, putative [Kordia algicida OT-1]
Length = 156
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 93/172 (54%), Gaps = 32/172 (18%)
Query: 71 LTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDD 130
+ ANS + + V D+MT L KP TV+E ++ L++ +I+G PV++D
Sbjct: 12 VQANSTNKAEA-FKVSDYMT--RNLITFKPEQTVEEV-----IQKLIQHKISGGPVVNDQ 63
Query: 131 WKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTP 190
+L+G++S+ D + IS S R N F N+++ ++K + GDL
Sbjct: 64 NELIGIISEGD--CIKQISDS-RYYNMPFEH--------NKIEAHMAKNVETIDGDL--- 109
Query: 191 APVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
N+ DAA +ETK RR P+V+ +GKLVG I++ ++++AA+++K
Sbjct: 110 ---------NIFDAANKFIETKRRRFPIVE-NGKLVGQISQKDILKAAMKLK 151
>gi|220925988|ref|YP_002501290.1| hypothetical protein Mnod_6174 [Methylobacterium nodulans ORS 2060]
gi|219950595|gb|ACL60987.1| CBS domain containing membrane protein [Methylobacterium nodulans
ORS 2060]
Length = 246
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 24/135 (17%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A+ +++EKRI+G PV+D D ++G+V++ DLLA PE+ + N
Sbjct: 23 AVALMLEKRISGLPVLDPDGAVIGIVTEGDLLA--------------RPELGTARPKPNW 68
Query: 172 VQKLLS---------KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 222
VQ L+S + G+ VGD+MT V T L++ L+ + +R+PVVD
Sbjct: 69 VQYLISPGRLAEAYARERGRQVGDVMTKEVVTASPDTPLDEIVDLMARRRIKRVPVVD-K 127
Query: 223 GKLVGIITRGNVVRA 237
G+++GI+TR +++RA
Sbjct: 128 GRMIGIVTRADLLRA 142
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
D+MT VR LE A L+LE + LPV+D DG ++GI+T G+++
Sbjct: 5 DIMTEEVTGVRADLPLELAVALMLEKRISGLPVLDPDGAVIGIVTEGDLL 54
>gi|427722542|ref|YP_007069819.1| putative signal transduction protein [Leptolyngbya sp. PCC 7376]
gi|427354262|gb|AFY36985.1| putative signal transduction protein with CBS domains [Leptolyngbya
sp. PCC 7376]
Length = 155
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 90/161 (55%), Gaps = 14/161 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV + MT VVK T + EA +++LV+++++G PV+D + KLVG++S+ DL
Sbjct: 5 TVAEIMTADPV--VVKKDTPLAEA-----IQLLVDRKVSGLPVVDQEMKLVGIISEGDL- 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNL 201
+ +G +DS N + K + K G+ VG++M+ V + +
Sbjct: 57 ---TWQETGVDTPPYIMLLDSVIYLQNPAKHDKEIHKALGQTVGEVMSDKVVTIAPNKMV 113
Query: 202 EDAARLLLETKYRRLPVVDAD-GKLVGIITRGNVVRAALQI 241
+AA L+ E K RLPV+ +D K++GIIT+G+++RA Q+
Sbjct: 114 REAAHLMHEKKVGRLPVLASDSNKVLGIITQGDIIRAMAQV 154
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
K V ++MT PVVV++ T L +A +LL++ K LPVVD + KLVGII+ G++
Sbjct: 4 KTVAEIMTADPVVVKKDTPLAEAIQLLVDRKVSGLPVVDQEMKLVGIISEGDL 56
>gi|347730925|ref|ZP_08864035.1| CBS domain pair family protein [Desulfovibrio sp. A2]
gi|347520431|gb|EGY27566.1| CBS domain pair family protein [Desulfovibrio sp. A2]
Length = 150
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 11/152 (7%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 148
M +++ P T E + A I+++++ G PV+D LVG++ DL+A
Sbjct: 1 MLLAKDIMTAAPVTVTPETGIAEAARIMIQRKFNGLPVVDAKGALVGVICQSDLIA---- 56
Query: 149 SGSGRADN--SMFPEVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ N ++F +D ++ +++ + + K + VG MTP PV V T +++
Sbjct: 57 --QHKKLNLPTLFTVLDGFIPLRSMSDLDEEMRKISATNVGQAMTPDPVTVGPETPIDEV 114
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
A L++++KY LPVVD G LVG+I + +V+R
Sbjct: 115 ASLMVDSKYHTLPVVDG-GTLVGVIGKEDVLR 145
>gi|424894152|ref|ZP_18317729.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393183179|gb|EJC83217.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 223
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 20/155 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MTT + V P +V +A +++ +++++G PV+DDD +L+GL+S+ DL+
Sbjct: 3 VKDVMTTT--IVTVSPDNSVRQA-----AKLMADRQVSGIPVVDDDGRLIGLISEGDLIR 55
Query: 145 LDSISGSG---RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
+S +A+ + P +E K VGD+MTP PV + E L
Sbjct: 56 RTELSSGAFLLKAEMGLGP---------DERANAFVKRCAWRVGDVMTPNPVTIFEDAPL 106
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
A L+ E +R+PV+ A GKLVGI++R ++++
Sbjct: 107 SRVAGLMQEHGIKRIPVLRA-GKLVGIVSRADLLQ 140
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V D+MT V V ++ AA+L+ + + +PVVD DG+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTTIVTVSPDNSVRQAAKLMADRQVSGIPVVDDDGRLIGLISEGDLIR 55
>gi|325959819|ref|YP_004291285.1| hypothetical protein Metbo_2094 [Methanobacterium sp. AL-21]
gi|325331251|gb|ADZ10313.1| CBS domain containing membrane protein [Methanobacterium sp. AL-21]
Length = 159
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 74/125 (59%), Gaps = 9/125 (7%)
Query: 118 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP------EVDSTWK-TFN 170
+ +I+G PV+D++ +VG++S+ D++ L I N + P E+ K +
Sbjct: 29 DNKISGAPVVDENNHVVGVISEGDIMRLIEIHSPKI--NLILPAPLDLIELPIKMKYELD 86
Query: 171 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
EV + + K ++ +MT + V+ T++ DAA+LL K +RLPV+D DGKLVGIIT
Sbjct: 87 EVAEDMQKAGSTVIDQIMTKKIIKVKPDTSVIDAAKLLDSHKIKRLPVIDNDGKLVGIIT 146
Query: 231 RGNVV 235
RG+++
Sbjct: 147 RGDII 151
>gi|332711630|ref|ZP_08431561.1| putative signal-transduction protein [Moorea producens 3L]
gi|332349608|gb|EGJ29217.1| putative signal-transduction protein [Moorea producens 3L]
Length = 155
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 86/156 (55%), Gaps = 13/156 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV + MT + VV+P T + E ++I+ E+ I+G PV+++ KLVG++S+ DLL
Sbjct: 4 TVAEVMT--RDPIVVQPETPIKEV-----IKIIAEQSISGLPVVNEAGKLVGVISETDLL 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNL 201
++ G MF +DS N + + L K G+ G++MT P+ ++ L
Sbjct: 57 WQET--GVEPPVYIMF--LDSVIYLENPARYDQELHKALGQTAGEVMTGHPMSIKPDQPL 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
AA+L+ E LPV D +++GI++ G++VRA
Sbjct: 113 RKAAKLMQEKSIHHLPVTDEAEQVIGILSSGDIVRA 148
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K V ++MT P+VV+ T +++ +++ E LPVV+ GKLVG+I+ +++
Sbjct: 2 AKTVAEVMTRDPIVVQPETPIKEVIKIIAEQSISGLPVVNEAGKLVGVISETDLL 56
>gi|15669617|ref|NP_248430.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanocaldococcus
jannaschii DSM 2661]
gi|2496178|sp|Q58821.1|Y1426_METJA RecName: Full=Uncharacterized protein MJ1426
gi|1592076|gb|AAB99437.1| inosine-5'-monophosphate dehydrogenase, (guaB) [Methanocaldococcus
jannaschii DSM 2661]
Length = 168
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 88/161 (54%), Gaps = 11/161 (6%)
Query: 86 GDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 145
G+ M K+ + KP ++ + + + + +I+G PV++ D KLVG++S+ D++
Sbjct: 12 GEIMLIKDIMK--KPIVVYEDNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVK- 68
Query: 146 DSISGSGRADNSMFPE----VDSTWKTFNEVQKLLSKTNGKM---VGDLMTPAPVVVRET 198
+I N + P ++ KT ++++ + + V D+MT +V +
Sbjct: 69 -TIVTHNEDLNLILPSPLDLIELPLKTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPD 127
Query: 199 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
+ DAA+L+++ +RLPVVD +G L+GI+TRG+++ A +
Sbjct: 128 MTINDAAKLMVKNNIKRLPVVDDEGNLIGIVTRGDLIEALI 168
>gi|150020570|ref|YP_001305924.1| signal transduction protein [Thermosipho melanesiensis BI429]
gi|149793091|gb|ABR30539.1| putative signal transduction protein with CBS domains [Thermosipho
melanesiensis BI429]
Length = 147
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 81/145 (55%), Gaps = 10/145 (6%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDSISG 150
++ ++ T +++ V L+IL + ITG PV+++D+K+VG +S+ D++ AL S
Sbjct: 4 KDFYIRDITAVLEDESVSRVLKILSRQEITGVPVVNEDYKVVGFISENDIIRAALPS-YF 62
Query: 151 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 210
S S P+ N+ + L K + K V ++MT +V++E T L AA L++
Sbjct: 63 SLLQTASFIPD-------LNQFVRSLKKISNKSVSEIMTKPAIVIKEDTPLLHAADLMIR 115
Query: 211 TKYRRLPVVDADGKLVGIITRGNVV 235
+ LPVVD +LVG+ITR ++
Sbjct: 116 HSLKILPVVDDGERLVGVITRMRIL 140
>gi|218678132|ref|ZP_03526029.1| signal-transduction protein [Rhizobium etli CIAT 894]
Length = 201
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 13/134 (9%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG---RADNSMFPEVDSTWKT 168
A +++ +++++G PV+DDD +L+G++S+ DL+ +S +AD + P
Sbjct: 23 AAKLMADQQVSGVPVVDDDGRLLGVISEGDLIRRTELSSGAFVLKADMELGP-------- 74
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+E K VGD+MTP P+ + E L A L+ E +R+PV+ DGKLVGI
Sbjct: 75 -DERANAFVKRCAWRVGDVMTPDPLTIDEDAALSHVAELMQERGIKRIPVL-RDGKLVGI 132
Query: 229 ITRGNVVRAALQIK 242
++R ++++ K
Sbjct: 133 VSRADLLQVIYSAK 146
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR------ 236
+V D+MT V + ++ AA+L+ + + +PVVD DG+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTTVVTLSPDNSVRHAAKLMADQQVSGVPVVDDDGRLLGVISEGDLIRRTELSS 61
Query: 237 AALQIKHATEMG 248
A +K E+G
Sbjct: 62 GAFVLKADMELG 73
>gi|359393632|ref|ZP_09186685.1| hypothetical protein KUC_0271 [Halomonas boliviensis LC1]
gi|357970879|gb|EHJ93324.1| hypothetical protein KUC_0271 [Halomonas boliviensis LC1]
Length = 229
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 19/130 (14%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSISGSGRADNSMFPEVDSTWKTFN 170
++L+ RI+ PV+DDD +++G+VS+ DL+ DS GS S W +
Sbjct: 25 QLLLNHRISAVPVVDDDHRVIGIVSEGDLMRRVKNDSDHGS------------SWWLSLF 72
Query: 171 EVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 227
K K++G+ ++MTP P+ V E T L AR+L + +R+PV+ DGKLVG
Sbjct: 73 TGGKDAGDYVKSHGRKAHEVMTPNPMTVEENTPLHTIARMLEKHHIKRVPVL-RDGKLVG 131
Query: 228 IITRGNVVRA 237
I++R N+++
Sbjct: 132 IVSRANLLQG 141
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
D+MTP V V + + A+LLL + +PVVD D +++GI++ G+++R ++K+ +
Sbjct: 5 DIMTPKVVSVGPGAEVREIAQLLLNHRISAVPVVDDDHRVIGIVSEGDLMR---RVKNDS 61
Query: 246 EMGA 249
+ G+
Sbjct: 62 DHGS 65
>gi|402848240|ref|ZP_10896505.1| putative CBS domain protein [Rhodovulum sp. PH10]
gi|402501566|gb|EJW13213.1| putative CBS domain protein [Rhodovulum sp. PH10]
Length = 180
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 79/132 (59%), Gaps = 13/132 (9%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
+ A ++++E R++G PV+D +LVG+VS++DLL S +G+ R + + +
Sbjct: 20 IAEAAQLMLEHRVSGLPVVDATGRLVGIVSEHDLLRRRS-NGATRRPHWL--------QL 70
Query: 169 FNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
E Q L + + VGD+MT V V + T+LE+A RL+ +RLPV+ DG++
Sbjct: 71 MTEGQALAQEPERFHALTVGDVMTTEVVAVSDDTSLEEAGRLIEVHGIKRLPVI-RDGRV 129
Query: 226 VGIITRGNVVRA 237
+G+++R +++RA
Sbjct: 130 IGVLSRADLLRA 141
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
V D M+ V + + +AA+L+LE + LPVVDA G+LVGI++ +++R
Sbjct: 3 VRDFMSHPAVAIAPDRPIAEAAQLMLEHRVSGLPVVDATGRLVGIVSEHDLLR 55
>gi|268324813|emb|CBH38401.1| conserved hypothetical protein containing CBS domain pair
[uncultured archaeon]
Length = 160
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 34/174 (19%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYD 141
V V + MTT ++ KP+ V + E RI+G PVIDD K++G++S+ D
Sbjct: 6 VVKVRELMTT--DVIAFKPSDKVHQV-----AETFRSNRISGAPVIDDQRKVIGVISEAD 58
Query: 142 LLALDSISGSGRADNSMFPEVD---------------STWKTFNEVQKLLSKTNGKMVGD 186
++ L + FP++D K +E++ L + V D
Sbjct: 59 IMKLTA--------TVPFPDIDPLNPFPVFSLTAYRKKVEKIPDEIETLFEGS----VKD 106
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+MT PV + ++ DAARL+ + + R+PVVD +GKLVG+I R +++ +Q
Sbjct: 107 VMTKDPVTISPDDSILDAARLMHKGDFNRIPVVDDEGKLVGLIARADIIGLFVQ 160
>gi|378825222|ref|YP_005187954.1| hypothetical protein SFHH103_00630 [Sinorhizobium fredii HH103]
gi|365178274|emb|CCE95129.1| hypothetical protein SFHH103_00630 [Sinorhizobium fredii HH103]
Length = 222
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL-----LALDSISGSGRADNSMFPEVD 163
V A +++E ++G PV+DD+ LVG++S+ DL L + +I+ A+ +M E
Sbjct: 20 VRQAANVMLENHVSGIPVVDDEGHLVGIISEGDLIRRTELGIGAIAS--LAEMAMPAE-- 75
Query: 164 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 223
E K + VGD MT APV + E +L A+L+LE +R+PV A G
Sbjct: 76 -------ERAGAYVKRSSWKVGDAMTSAPVTIDEDASLTQVAKLMLERGIKRIPVTRA-G 127
Query: 224 KLVGIITRGNVVRAALQIK 242
+LVGI++R +++RA L K
Sbjct: 128 ELVGIVSRADLLRAILIAK 146
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V D+MT A V V ++ AA ++LE +PVVD +G LVGII+ G+++R
Sbjct: 2 LVKDVMTIAIVKVSPDNSVRQAANVMLENHVSGIPVVDDEGHLVGIISEGDLIR 55
>gi|170076975|ref|YP_001733613.1| hypothetical protein SYNPCC7002_A0347 [Synechococcus sp. PCC 7002]
gi|169884644|gb|ACA98357.1| CBS domain protein [Synechococcus sp. PCC 7002]
Length = 155
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 13/159 (8%)
Query: 89 MTTKEELHVVKPTTTVDEA--FVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL---- 142
M TK V+ P V +A + TA+ +LVEK+I+ PV+D KLVG++SD DL
Sbjct: 1 MITKTVAEVMTPDPAVVKADDSLQTAIALLVEKKISALPVVDGQGKLVGIISDSDLTWQE 60
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
+D+ D+ ++ + + K E+ K L G+ VG++M+ + +
Sbjct: 61 TGVDTPPYIMLLDSVIY--LQNPAKHDAEIHKAL----GQTVGEVMSKKVYTIHPEKIVR 114
Query: 203 DAARLLLETKYRRLPVVDADG-KLVGIITRGNVVRAALQ 240
+AA L+ E RLPV+ D K++GIIT+G+++RA Q
Sbjct: 115 EAAHLMHEKHVGRLPVIAPDSEKVIGIITQGDIIRAMAQ 153
>gi|398356193|ref|YP_006529520.1| hypothetical protein USDA257_p01020 [Sinorhizobium fredii USDA 257]
gi|399995408|ref|YP_006575646.1| hypothetical protein SFHH103_04632 [Sinorhizobium fredii HH103]
gi|365182255|emb|CCE99105.1| hypothetical protein SFHH103_04632 [Sinorhizobium fredii HH103]
gi|390131440|gb|AFL54820.1| hypothetical protein USDA257_p01020 [Sinorhizobium fredii USDA 257]
Length = 226
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 18/135 (13%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
E V A +++E I+G PV+DD+ LVG++++ DLL RA+ + P +
Sbjct: 17 EHSVKHAACVMLENHISGLPVLDDNESLVGILTEGDLLR--------RAE--LGP---AA 63
Query: 166 WK----TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 221
W+ T E ++ K N VGD+MTP V V E T ++ A + +R+PVV A
Sbjct: 64 WRGTGSTHEEAPEIFIKGNSWRVGDVMTPGVVTVDEDTPVDRIAAAMKTHDIKRVPVVRA 123
Query: 222 DGKLVGIITRGNVVR 236
G++VGI++RG+++R
Sbjct: 124 -GQMVGIVSRGDILR 137
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
D+MT + + +++ AA ++LE LPV+D + LVGI+T G+++R A
Sbjct: 5 DIMTRRVIAISPEHSVKHAACVMLENHISGLPVLDDNESLVGILTEGDLLRRA 57
>gi|147678859|ref|YP_001213074.1| CBS domain-containing protein [Pelotomaculum thermopropionicum SI]
gi|146274956|dbj|BAF60705.1| FOG: CBS domain [Pelotomaculum thermopropionicum SI]
Length = 159
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 27/161 (16%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT ++++ +K T V + L + K+ITG PV+D+ +LVG+++ D+L
Sbjct: 2 TVKDLMT--KDVYTIKDTDKVIDL-----LRLFERKKITGAPVVDNCNRLVGIITVGDIL 54
Query: 144 ALDSISGSGRA-------DNSMFPEVDSTWKTFN-EVQKLLSKTNGKMVGDLMTPAPVVV 195
GR D + V T N E+ +L GK+V +LMT + V
Sbjct: 55 --------GRIYKPVPLFDIMYYVAVLDTDAIVNGEIYDVL----GKLVSELMTRKVITV 102
Query: 196 RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
E T D A+++ ++++LPVVD+ KL+G+I+RG +VR
Sbjct: 103 SEDTEFADVAKIMSRHRFKKLPVVDSSNKLIGVISRGEIVR 143
>gi|310659366|ref|YP_003937087.1| CBS domain containing protein [[Clostridium] sticklandii]
gi|308826144|emb|CBH22182.1| CBS domain containing protein [[Clostridium] sticklandii]
Length = 150
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 78/133 (58%), Gaps = 11/133 (8%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA----DNSMFPEVDS 164
V A+++L+E ITG PV+D+ ++G++++ DL+ R D+ +F +D+
Sbjct: 20 VEKAIKLLLEHNITGLPVVDEANHVIGIITEGDLMYRGGEIKPPRYLAIFDSYIF--IDN 77
Query: 165 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 224
K +K L K G V D+MT +V+ ++ DAA L+ + K RLPV++ +GK
Sbjct: 78 PSK----FEKQLKKMTGMFVEDVMTTPVIVIEAEQSVPDAANLMTKHKVNRLPVIE-EGK 132
Query: 225 LVGIITRGNVVRA 237
LVGII+R +++++
Sbjct: 133 LVGIISRRDIIKS 145
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
D+MTP + V ++ ++E A +LLLE LPVVD ++GIIT G+++ +IK
Sbjct: 5 DIMTPNVITVSKSDSVEKAIKLLLEHNITGLPVVDEANHVIGIITEGDLMYRGGEIK 61
>gi|427714431|ref|YP_007063055.1| hypothetical protein Syn6312_3486 [Synechococcus sp. PCC 6312]
gi|427378560|gb|AFY62512.1| CBS domain-containing protein [Synechococcus sp. PCC 6312]
Length = 152
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 23/160 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MTT H V PT +++ TA++++ E+++ G PV+D+ KLVGL+++ DL+
Sbjct: 6 VQDYMTTNP--HTVSPTDSIE-----TAIKLMEERQVRGLPVVDEAGKLVGLITEADLIV 58
Query: 145 LDSISGSGRADNSMFPEVDST-------WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 197
++ + P V T +++ + L KT G V D MT PV
Sbjct: 59 REA---------PLEPPVYLTLLGSVIYFESPEKFHHHLKKTLGMQVQDAMTTDPVTTTP 109
Query: 198 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
TT + + A+ ++ RLPV+D G LVGIITR ++++A
Sbjct: 110 TTPISEVAQAIVHHHISRLPVLDETGGLVGIITRHDLMQA 149
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN-VVRAA 238
+V D MT P V T ++E A +L+ E + R LPVVD GKLVG+IT + +VR A
Sbjct: 5 VVQDYMTTNPHTVSPTDSIETAIKLMEERQVRGLPVVDEAGKLVGLITEADLIVREA 61
>gi|304314784|ref|YP_003849931.1| CBS domain containing protein [Methanothermobacter marburgensis
str. Marburg]
gi|302588243|gb|ADL58618.1| CBS domain containing protein [Methanothermobacter marburgensis
str. Marburg]
Length = 156
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 79/139 (56%), Gaps = 10/139 (7%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP------EV 162
+ A IL E RI+G PV+DD+ KLVG++S+ D++ L I + N + P E+
Sbjct: 21 IHDAARILRENRISGAPVVDDEGKLVGVISEGDIMRL--IEVHSPSLNLLMPSPLDLLEL 78
Query: 163 DSTWK-TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 221
K ++E+ K + K V ++MT V V ++ DAA L+ +RLPVV+
Sbjct: 79 PVRMKHEYDEIAKGIRKAAMMRVEEIMTDRVVTVHPDASVSDAAELMDRHDIKRLPVVE- 137
Query: 222 DGKLVGIITRGNVVRAALQ 240
D +LVGIITRG+++ A ++
Sbjct: 138 DDELVGIITRGDIIGAFVK 156
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
V D M + V+ + + DAAR+L E + PVVD +GKLVG+I+ G+++R
Sbjct: 4 VKDAMQTEVITVKRNSKIHDAARILRENRISGAPVVDDEGKLVGVISEGDIMR 56
>gi|359791626|ref|ZP_09294471.1| putative CBS domain protein [Mesorhizobium alhagi CCNWXJ12-2]
gi|359252271|gb|EHK55537.1| putative CBS domain protein [Mesorhizobium alhagi CCNWXJ12-2]
Length = 220
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 7/134 (5%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V A I+++ RI+G PVIDDD ++VG+V++ DL+ + ++ P VD + T
Sbjct: 20 VRHAARIMLDHRISGLPVIDDDGRVVGIVTEGDLMRRSELGA-----QALAP-VDRQFST 73
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
K++ V D+MT PV V E T L A L+ E +R+PV+ G LVGI
Sbjct: 74 EENNAGAYVKSHSWKVADVMTEDPVKVEEETPLPRIAALMAERGIKRVPVMRG-GHLVGI 132
Query: 229 ITRGNVVRAALQIK 242
++R ++R + K
Sbjct: 133 VSRAELLRVLITAK 146
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 7/65 (10%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
D+MT V V ++ AAR++L+ + LPV+D DG++VGI+T G+++R +
Sbjct: 5 DVMTVDVVSVSPDHSVRHAARIMLDHRISGLPVIDDDGRVVGIVTEGDLMR-------RS 57
Query: 246 EMGAQ 250
E+GAQ
Sbjct: 58 ELGAQ 62
>gi|186470615|ref|YP_001861933.1| signal-transduction protein [Burkholderia phymatum STM815]
gi|184196924|gb|ACC74887.1| putative signal-transduction protein with CBS domains [Burkholderia
phymatum STM815]
Length = 231
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P TV EA + LV+ RI+G PV+D LVG+VS+ DL L + S
Sbjct: 15 QPDMTVQEAA-----KRLVDNRISGMPVVDASGGLVGMVSEGDL--LHRVETGTETRRSR 67
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
+ EV S T ++ K +G+ V D+MT + + V + D A L+ + +R+PV
Sbjct: 68 WLEVFS---TTRDLASTFVKEHGRSVADVMTASVLTVDWQMPVADIADLMERRRIKRVPV 124
Query: 219 VDADGKLVGIITRGNVVRA 237
+ GKL+GI+TRGN++RA
Sbjct: 125 MRG-GKLIGIVTRGNLIRA 142
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
D+MTP+ + + +++AA+ L++ + +PVVDA G LVG+++ G+++ H
Sbjct: 5 DVMTPSVICAQPDMTVQEAAKRLVDNRISGMPVVDASGGLVGMVSEGDLL-------HRV 57
Query: 246 EMGAQ 250
E G +
Sbjct: 58 ETGTE 62
>gi|94266307|ref|ZP_01290010.1| CBS [delta proteobacterium MLMS-1]
gi|93453098|gb|EAT03574.1| CBS [delta proteobacterium MLMS-1]
Length = 149
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 20/145 (13%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
VKP V+E +L EKRI+G PV+DDD KLVG+ ++ DL+ +A
Sbjct: 15 VKPEMPVEELAA-----LLWEKRISGVPVVDDDGKLVGVATESDLI--------DQAKKF 61
Query: 158 MFPEVDSTWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
P + + +V+K +SK G V D+ T PV V T L++ A ++ E
Sbjct: 62 HIPTAITILEAVIFLDRGKKVEKEVSKMAGSRVRDICTSEPVTVGPETPLDELATIMAEK 121
Query: 212 KYRRLPVVDADGKLVGIITRGNVVR 236
LPV++ DG+LVG+I + +++R
Sbjct: 122 HLHTLPVLE-DGQLVGVIGKADIIR 145
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
++MT V V+ +E+ A LL E + +PVVD DGKLVG+ T +++ A
Sbjct: 6 EIMTREVVSVKPEMPVEELAALLWEKRISGVPVVDDDGKLVGVATESDLIDQA 58
>gi|408381781|ref|ZP_11179329.1| CBS domain-containing membrane protein [Methanobacterium formicicum
DSM 3637]
gi|407815712|gb|EKF86282.1| CBS domain-containing membrane protein [Methanobacterium formicicum
DSM 3637]
Length = 157
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 79/132 (59%), Gaps = 9/132 (6%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP------EVDSTWK-T 168
L E +I+G PV++ + +LVG++S+ D++ L I + P E+ K
Sbjct: 27 LRENKISGAPVMNKEDQLVGIISEGDIMRLLEIHSPHI--RLILPSPLDLIELPVRMKYE 84
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+E+ + ++K ++G++MT V + +++ DAA+L+ +RLPVVD+DGK+VGI
Sbjct: 85 MDEIAEDMNKAASVLIGEIMTKKVVTIDPDSDISDAAQLMDTHDVKRLPVVDSDGKMVGI 144
Query: 229 ITRGNVVRAALQ 240
ITRG+++ A ++
Sbjct: 145 ITRGDIIGAMVR 156
>gi|288574950|ref|ZP_06393307.1| CBS domain containing membrane protein [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570691|gb|EFC92248.1| CBS domain containing membrane protein [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 158
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 14/125 (11%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A+ +L ++G PVIDDDW+LVG +S+ D+L + + E+ + F
Sbjct: 26 AIHVLYSHGLSGLPVIDDDWRLVGYLSESDIL---------KPTIPTYLEILAQSTFFGN 76
Query: 172 VQKLLSKTNGKM----VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 227
+ LL + G M V D M PV V T++ A ++L K++RLPV + +GK +G
Sbjct: 77 EENLLFQRFGAMKNDLVKDFMQKDPVFVFPDTSIMTVADMMLRKKFKRLPVTE-EGKFIG 135
Query: 228 IITRG 232
II RG
Sbjct: 136 IIDRG 140
>gi|452851187|ref|YP_007492871.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
gi|451894841|emb|CCH47720.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
Length = 149
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 15/156 (9%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MTT E + P T V TA L+E +I G PVID+ ++VG++ DL+A
Sbjct: 6 DIMTT--ECITLTPDTDV-----ATAARTLIENKINGAPVIDN-GQVVGVLCQADLVA-- 55
Query: 147 SISGSGRADNSMFPEVDSTW--KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
S F +D + + E+++ + K + VG+ MTPAP+ + T +ED
Sbjct: 56 --QQKKVTLPSFFTLLDGVFPLSSHEELEREMKKISALTVGEAMTPAPIFISPETKMEDI 113
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
A ++ K LPV+D D KLVG++ + +V++ LQ
Sbjct: 114 ATMMANEKLYTLPVLD-DDKLVGVVGKEDVLKTLLQ 148
>gi|94270649|ref|ZP_01291791.1| CBS [delta proteobacterium MLMS-1]
gi|93450722|gb|EAT01796.1| CBS [delta proteobacterium MLMS-1]
Length = 149
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 20/145 (13%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
VKP V+E +L EKRI+G PV+DDD KLVG+ ++ DL+ +A
Sbjct: 15 VKPEMPVEELAA-----LLWEKRISGVPVVDDDGKLVGVATESDLI--------DQAKKF 61
Query: 158 MFPEVDSTWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
P + + +V+K +SK G V D+ T PV V T L++ A ++ E
Sbjct: 62 HIPTAITILEAVIFLDRGKKVEKEVSKMAGSRVRDICTSEPVTVGPETPLDELATIMAEK 121
Query: 212 KYRRLPVVDADGKLVGIITRGNVVR 236
LPV++ DG+LVG+I + +++R
Sbjct: 122 HLHTLPVLE-DGQLVGVIGKADIIR 145
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
++MT V V+ +E+ A LL E + +PVVD DGKLVG+ T +++ A
Sbjct: 6 EIMTREVVSVKPEMPVEELAALLWEKRISGVPVVDDDGKLVGVATESDLIDQA 58
>gi|148656616|ref|YP_001276821.1| hypothetical protein RoseRS_2494 [Roseiflexus sp. RS-1]
gi|148568726|gb|ABQ90871.1| CBS domain containing protein [Roseiflexus sp. RS-1]
Length = 427
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 91/164 (55%), Gaps = 14/164 (8%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDW 131
T+ + P TV D MT ++ V+P T V E + +L+++ + PV+D +
Sbjct: 108 TSRAIGPFPAHLTVADVMT--RQVVSVRPDTPVAEI-----VALLIDRALRSAPVVDAEN 160
Query: 132 KLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPA 191
+++G+++D DLL G+ ++ E+ S + ++ L T+ DLMTP
Sbjct: 161 RVIGIITDGDLLT----RGATELPLALQREL-SLAERAATIETL--ATHRHTAADLMTPN 213
Query: 192 PVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
PV +RETT L +AA ++ + +R+PVVDA +LVG+++R +++
Sbjct: 214 PVTLRETTPLAEAAAVMADRGLKRIPVVDAQQRLVGMVSRSDLL 257
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLV 137
P TVG+ M T ++ V+P T + E L+ L+E V+D + ++VG++
Sbjct: 275 PDGAPKTVGEIMIT--DVPTVQPDTPLAET-----LDRLLETDKRRVIVVDGERRVVGII 327
Query: 138 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 197
+D D++ + R + + + L G+ D+MT V +
Sbjct: 328 TDGDVMR----RAAKRVRPGALRALAAWFGGGARPPGLEVAAEGRTAADVMTSPVVTLPT 383
Query: 198 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ DA RL++ K +R+P++DADG+LVG++ R V+ A
Sbjct: 384 NAPIADAVRLMMAHKIKRIPIIDADGRLVGMVGRAGVLAA 423
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
+T D MT P T + + A ++ ++ + PV+D +LVG+VS DL
Sbjct: 204 HTAADLMTPN-------PVTLRETTPLAEAAAVMADRGLKRIPVVDAQQRLVGMVSRSDL 256
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
LA + G + + + D KT E+ M+ D+ T V+ T L
Sbjct: 257 LATVA-EGLRQRPATPIRQPDGAPKTVGEI----------MITDVPT-----VQPDTPLA 300
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+ LLET RR+ VVD + ++VGIIT G+V+R A
Sbjct: 301 ETLDRLLETDKRRVIVVDGERRVVGIITDGDVMRRA 336
>gi|303284687|ref|XP_003061634.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456964|gb|EEH54264.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 256
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
VG+ MT + + + + V +A LE+LV R +G PV+DDD ++VG++S+YDL+
Sbjct: 91 VGNVMTPRANVSCARASDNVLDA-----LEVLVSNRHSGVPVLDDDERVVGVISEYDLMV 145
Query: 145 LDSISGSGRA--DNSMFPE----------VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP 192
G ++ D+ MFP+ V W F ++Q + K V + M A
Sbjct: 146 RIGREGKKQSEKDDGMFPKIGRCDEFGGAVKDMWSRFIDLQDRMEKAQVTTVREAMHDAM 205
Query: 193 VVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
ET L DA +L + R+ VVD D K+ I+
Sbjct: 206 TCTPETL-LVDATDAMLNERRHRICVVDEDDKVRSIL 241
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 9/88 (10%)
Query: 162 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV--VRETTNLEDAARLLLETKYRRLPVV 219
V TW ++L ++ ++VG++MTP V R + N+ DA +L+ ++ +PV+
Sbjct: 75 VAETW------EELEAEVANEVVGNVMTPRANVSCARASDNVLDALEVLVSNRHSGVPVL 128
Query: 220 DADGKLVGIITRGN-VVRAALQIKHATE 246
D D ++VG+I+ + +VR + K +E
Sbjct: 129 DDDERVVGVISEYDLMVRIGREGKKQSE 156
>gi|116749632|ref|YP_846319.1| hypothetical protein Sfum_2202 [Syntrophobacter fumaroxidans MPOB]
gi|116698696|gb|ABK17884.1| CBS domain containing membrane protein [Syntrophobacter
fumaroxidans MPOB]
Length = 152
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 14/157 (8%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MT ++ V P T + +A ++L++K I G PVIDD LVG++ DL+A
Sbjct: 4 VADIMT--RDVISVSPQTEIVQAA-----KLLLDKHINGLPVIDDRGNLVGILCQSDLIA 56
Query: 145 LDSISGSGRADNSM--FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
N + F + S + EVQK+ + T VG+ MT PV V T +E
Sbjct: 57 QQKRFPLPSVFNLLDSFIPLTSPSRFEKEVQKISAVT----VGEAMTREPVTVSPDTTIE 112
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
+ ARL++ LPVVD + KL+GII + +V+R L
Sbjct: 113 EVARLMVNKNLHTLPVVDGN-KLIGIIGKEDVLRTLL 148
>gi|258649204|ref|ZP_05736673.1| inosine-5'-monophosphate dehydrogenase [Prevotella tannerae ATCC
51259]
gi|260850469|gb|EEX70338.1| inosine-5'-monophosphate dehydrogenase [Prevotella tannerae ATCC
51259]
Length = 493
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 33/142 (23%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
+ P T + V AL+++ E I G PV+DDD LVG+V++ DL R ++
Sbjct: 100 IYDPVTIHRGSTVRGALQLMHEYHIGGIPVVDDDMHLVGIVTNRDL----------RFEH 149
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRR 215
++ +V+ D+MT +V + T+L+ AAR+L E K +
Sbjct: 150 NLDQKVE----------------------DVMTKEHLVTTTQQTDLQGAARILKENKIEK 187
Query: 216 LPVVDADGKLVGIITRGNVVRA 237
LPV+D DGKLVG+IT ++ +A
Sbjct: 188 LPVIDKDGKLVGLITYKDITKA 209
>gi|407974975|ref|ZP_11155882.1| hypothetical protein NA8A_11740 [Nitratireductor indicus C115]
gi|407429542|gb|EKF42219.1| hypothetical protein NA8A_11740 [Nitratireductor indicus C115]
Length = 216
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 81/139 (58%), Gaps = 13/139 (9%)
Query: 101 TTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS--GRADNSM 158
T +VD A V A+ +++E+ ++G PV D D KLVG++++ DL++ I S R D+ M
Sbjct: 13 TISVD-AHVRHAVSVMLERGVSGLPVTDSDGKLVGIITEGDLMSRKEIGRSLLDRQDHPM 71
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
E N+++ + N VGD+M+P V V +TT+L ++L +R+PV
Sbjct: 72 TDE--------NDLKNYI-HCNSWRVGDVMSPEVVTVADTTSLATVTEMMLSRNIKRIPV 122
Query: 219 VDADGKLVGIITRGNVVRA 237
+D ++GI++R ++++A
Sbjct: 123 T-SDRAVIGIVSRRDLLKA 140
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
D+MT + ++ A ++LE LPV D+DGKLVGIIT G+++
Sbjct: 5 DIMTRDVATISVDAHVRHAVSVMLERGVSGLPVTDSDGKLVGIITEGDLM 54
>gi|218128450|ref|ZP_03457254.1| hypothetical protein BACEGG_00018 [Bacteroides eggerthii DSM 20697]
gi|317475724|ref|ZP_07934983.1| inosine-5'-monophosphate dehydrogenase [Bacteroides eggerthii
1_2_48FAA]
gi|217989341|gb|EEC55654.1| inosine-5'-monophosphate dehydrogenase [Bacteroides eggerthii DSM
20697]
gi|316908107|gb|EFV29802.1| inosine-5'-monophosphate dehydrogenase [Bacteroides eggerthii
1_2_48FAA]
Length = 491
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 33/146 (22%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSSVADALGLMAEYKIGGIPVVDDEGHLVGIVTNRDLR--------- 144
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLET 211
K + K + ++MT + +V +TT+LE AA++L E
Sbjct: 145 -----------------------FEKDHNKRIDEVMTKSNIVTTNQTTDLEAAAQILQEH 181
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRA 237
K +LPVVD D KLVG+IT ++ +A
Sbjct: 182 KIEKLPVVDKDNKLVGLITYKDITKA 207
>gi|307726495|ref|YP_003909708.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
gi|307587020|gb|ADN60417.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
+ VEKRI+G PV+D D +VG++S+ DLL I R S W +E +
Sbjct: 26 LFVEKRISGAPVLDPDGSVVGMISEGDLLRRSEIGTDERRRVSWL----DFWSASHEARD 81
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
+ KT+G V D+MT + V T L + A +L +R+PV +A G+LVGI++R N+
Sbjct: 82 YV-KTHGTKVSDVMTTDVITVEPDTLLGEVAAILETRGIKRVPVTEA-GRLVGIVSRANL 139
Query: 235 VRA 237
V+A
Sbjct: 140 VQA 142
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MT + V + + ARL +E + PV+D DG +VG+I+ G+++R
Sbjct: 5 DVMTGNVISVTPDMTIREVARLFVEKRISGAPVLDPDGSVVGMISEGDLLR 55
>gi|357040593|ref|ZP_09102379.1| CBS domain containing membrane protein [Desulfotomaculum gibsoniae
DSM 7213]
gi|355356394|gb|EHG04183.1| CBS domain containing membrane protein [Desulfotomaculum gibsoniae
DSM 7213]
Length = 154
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 87/158 (55%), Gaps = 17/158 (10%)
Query: 86 GDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 145
GD MTT V T D+ + +L+E RI+G PV+DD KLVG+VS+ DL+
Sbjct: 5 GDIMTTD-----VITVNTHDD--LEKVARLLLEHRISGLPVVDDGGKLVGVVSEADLVFQ 57
Query: 146 DSISGSGRA----DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
+ + D+ ++ E + + ++++ +++ VG+LM+ V ++
Sbjct: 58 EKPVRTPFYVVIFDSPIYLERPNRF--IEDIKRAIAQK----VGELMSTNLYTVGPEASI 111
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
D A ++ E R+PVVD DGKL+GIITR ++++A+L
Sbjct: 112 RDVATIIAEKGVNRVPVVDVDGKLIGIITRQDIIKASL 149
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K GD+MT + V +LE ARLLLE + LPVVD GKLVG+++ ++V
Sbjct: 2 KKAGDIMTTDVITVNTHDDLEKVARLLLEHRISGLPVVDDGGKLVGVVSEADLV 55
>gi|374576817|ref|ZP_09649913.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
gi|374425138|gb|EHR04671.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
Length = 242
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 11/140 (7%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P T++ EA I++++ ++G V+D KL+G+VS+ D + I G+GR
Sbjct: 14 VTPDTSIVEA-----ANIMLKRHVSGLTVVDGAGKLIGVVSEGDFIRRSEI-GTGRKRGR 67
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ + K+ N+ +G+ V ++MTP+PV + E T L + L+ +RLP
Sbjct: 68 WLRFILGSGKSAND----FIHEHGRKVSEVMTPSPVTISEDTALAEIVDLMERNNVKRLP 123
Query: 218 VVDADGKLVGIITRGNVVRA 237
V+ D K+VGI++R N+++A
Sbjct: 124 VIHGD-KIVGIVSRANLLQA 142
>gi|224025972|ref|ZP_03644338.1| hypothetical protein BACCOPRO_02723 [Bacteroides coprophilus DSM
18228]
gi|224019208|gb|EEF77206.1| hypothetical protein BACCOPRO_02723 [Bacteroides coprophilus DSM
18228]
Length = 491
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 33/146 (22%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL+I+ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSTVKDALDIMSEYKIGGIPVVDDENYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET-TNLEDAARLLLET 211
R + M +D ++MT +V E T++E A+++L E
Sbjct: 144 RFEKDMNKRID----------------------EVMTKENIVTTEQGTDMETASKILQEN 181
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRA 237
K +LPVVD DGKL+G+IT ++ +A
Sbjct: 182 KIEKLPVVDKDGKLIGLITYKDITKA 207
>gi|210624234|ref|ZP_03294262.1| hypothetical protein CLOHIR_02218 [Clostridium hiranonis DSM 13275]
gi|210153128|gb|EEA84134.1| hypothetical protein CLOHIR_02218 [Clostridium hiranonis DSM 13275]
Length = 155
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 2/145 (1%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
+E+ V T + V ++L++ +I G PV+D+D K++G++S+ D+L +
Sbjct: 8 KEIMTVDVKTVKKDDTVSDVAKMLIQDKIGGLPVVDEDNKVIGIISETDILKKEKYIEPP 67
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R N F + ++K L + V DLMT V V E +D A ++++
Sbjct: 68 RVIN--FLQGLIFLDDMKNLEKDLKRIAAYKVEDLMTEDIVTVHEDDKFDDVANVMIKKS 125
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
R+PVVD DGK+ GII R +++++
Sbjct: 126 INRVPVVDDDGKIKGIICRYDIIKS 150
>gi|410460188|ref|ZP_11313871.1| CBS domain-containing membrane protein [Bacillus azotoformans LMG
9581]
gi|409927418|gb|EKN64554.1| CBS domain-containing membrane protein [Bacillus azotoformans LMG
9581]
Length = 181
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 38/172 (22%)
Query: 76 AAPSSG---VYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWK 132
A P+S + V DFM TK + VKP++T+ E L+IL RI G PV+DD
Sbjct: 23 AIPTSKEGIIMKVRDFMITK--VFTVKPSSTIKEL-----LDILNSNRIGGVPVVDDKGH 75
Query: 133 LVGLVSDYDLL-----------ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNG 181
LVG+VSD D+L L I G +N + ++D++ V+++++K N
Sbjct: 76 LVGMVSDGDVLRYLSPKRLGFAGLIYIIEDGELENVLHEKLDTS------VKEIMTKRN- 128
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
+++ +P E RLL Y++LPVV+ G+++G+++RG+
Sbjct: 129 -----ILSVSP-----EDEFEMTMRLLSIHNYKKLPVVNRAGRVIGVLSRGD 170
>gi|402571975|ref|YP_006621318.1| hypothetical protein Desmer_1454 [Desulfosporosinus meridiei DSM
13257]
gi|402253172|gb|AFQ43447.1| CBS-domain-containing membrane protein [Desulfosporosinus meridiei
DSM 13257]
Length = 149
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 15/129 (11%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST------WK 167
+IL + +I+G PV+D + KLVG+VS+ DLL + N P V ++
Sbjct: 25 KILYDHQISGAPVVDSEGKLVGIVSEGDLLH--------KETNPQIPGVVGILGALIYYR 76
Query: 168 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 227
+ Q L K ++MT V + + ++E+AA L++ K +RLPV++ DGK+VG
Sbjct: 77 GVRQYQSDLKKLIALQASEIMTSQVVKINKEASIEEAASLMVSKKIKRLPVIE-DGKIVG 135
Query: 228 IITRGNVVR 236
IITR ++++
Sbjct: 136 IITRMDIIK 144
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
V D+M + +R +++ A++L + + PVVD++GKLVGI++ G+++
Sbjct: 3 VKDVMQTNVITIRTDMEIKEVAKILYDHQISGAPVVDSEGKLVGIVSEGDLLH 55
>gi|242279465|ref|YP_002991594.1| hypothetical protein Desal_1995 [Desulfovibrio salexigens DSM 2638]
gi|242122359|gb|ACS80055.1| CBS domain containing membrane protein [Desulfovibrio salexigens
DSM 2638]
Length = 149
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 79/131 (60%), Gaps = 9/131 (6%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD-SISGSGRADNSMFPEVDS--T 165
V TA ++++EK + G PV+D KL+G++ DL+A +IS S+F +D +
Sbjct: 21 VATAAKLMLEKHLNGLPVVDRSGKLIGVLCQSDLVAQQKTISMP-----SLFTILDGFIS 75
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
+ + +++K ++K V MTP P+ + T++E A L++E K+ LPVV+ +GKL
Sbjct: 76 FSSNEDLEKEVNKIAATKVEHAMTPDPITIEPDTSIEKIADLMVERKFYTLPVVE-NGKL 134
Query: 226 VGIITRGNVVR 236
VG++ + +V++
Sbjct: 135 VGVVGKEDVLK 145
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
D+MT + + T++ AA+L+LE LPVVD GKL+G++ + ++V
Sbjct: 6 DIMTSGALTLEPDTDVATAAKLMLEKHLNGLPVVDRSGKLIGVLCQSDLV 55
>gi|27379749|ref|NP_771278.1| hypothetical protein blr4638 [Bradyrhizobium japonicum USDA 110]
gi|27352902|dbj|BAC49903.1| blr4638 [Bradyrhizobium japonicum USDA 110]
Length = 240
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 19/150 (12%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P TT++EA +I++ I+G PVIDD LVG+VS+ D L I G+GR
Sbjct: 14 VTPHTTIEEA-----AKIMLRMHISGLPVIDDAGNLVGIVSESDFLRRSEI-GTGRK--- 64
Query: 158 MFPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 213
+ W F +G+ V D+MT V RE T+L D L+ +
Sbjct: 65 -----HAAWLKFFMGPRRAAAEFVHESGRKVEDVMTRQVVSAREETSLVDVVDLMEKHDI 119
Query: 214 RRLPVVDADGKLVGIITRGNVVRAALQIKH 243
+R+PV+ + +GI+TR N+++A + H
Sbjct: 120 KRVPVMRGEAT-IGIVTRSNLLQAMASLAH 148
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+MT V V T +E+AA+++L LPV+D G LVGI++ + +R
Sbjct: 6 VMTRDVVAVTPHTTIEEAAKIMLRMHISGLPVIDDAGNLVGIVSESDFLR 55
>gi|337284850|ref|YP_004624324.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus yayanosii CH1]
gi|334900784|gb|AEH25052.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus yayanosii CH1]
Length = 486
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 41/144 (28%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKR-ITGFPVIDDDWKLVGLVSDYDLLALDSISGS 151
E++ +KP TV+ A L+EK I G PV+DDD +VG+VS D+ + D
Sbjct: 101 EDIITIKPEETVEYAL------FLMEKNDIDGLPVVDDDGMVVGIVSKKDIASRD----- 149
Query: 152 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
GK+V +LMT + V E+ +E+A R+++E
Sbjct: 150 -----------------------------GKLVKELMTRDVITVPESVEVEEALRIMVEN 180
Query: 212 KYRRLPVVDADGKLVGIITRGNVV 235
+ RLPVVD +GKLVG+IT ++V
Sbjct: 181 RIDRLPVVDREGKLVGLITMSDLV 204
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V AL I+VE RI PV+D + KLVGL++ DL+A + R +N
Sbjct: 170 VEEALRIMVENRIDRLPVVDREGKLVGLITMSDLVARKKYKNAVRNENG 218
>gi|220910106|ref|YP_002485417.1| hypothetical protein Cyan7425_4751 [Cyanothece sp. PCC 7425]
gi|219866717|gb|ACL47056.1| CBS domain containing membrane protein [Cyanothece sp. PCC 7425]
Length = 154
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 30/163 (18%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT VKPT ++ T ++++ + R+ G PV+D+D K+VG++S+ DLL
Sbjct: 6 VQDFMTPNPI--TVKPTDSI-----ATVVKLIEDHRVRGLPVVDEDGKVVGMISEGDLLV 58
Query: 145 LDSISGSGRADNSMFPEVDSTWKTF----------NEVQKLLSKTNGKMVGDLMTPAPVV 194
++ P + TF + L K+ +V D+MTP P
Sbjct: 59 REA------------PLQAPLYLTFLGSVIYFESPESFHQHLKKSLSMLVQDVMTPHPTT 106
Query: 195 VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
T + D A L++E RLPV+DA GKLVGII+R +++RA
Sbjct: 107 TTPETPIADVAHLMVEKHIDRLPVIDA-GKLVGIISRRDLIRA 148
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN-VVRAA 238
+V D MTP P+ V+ T ++ +L+ + + R LPVVD DGK+VG+I+ G+ +VR A
Sbjct: 5 LVQDFMTPNPITVKPTDSIATVVKLIEDHRVRGLPVVDEDGKVVGMISEGDLLVREA 61
>gi|71394085|gb|AAZ32124.1| CBS domain protein [uncultured euryarchaeote Alv-FOS5]
Length = 156
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 78/140 (55%), Gaps = 9/140 (6%)
Query: 105 DEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVD 163
D + ++I+ +++I+G PV+++ KL+G+V+D D++ +LD A + P D
Sbjct: 17 DNEGIAKVIDIMKKRKISGLPVVNNSGKLIGVVTDGDIIRSLDIPDFPTSAVSP--PPFD 74
Query: 164 STWKTFN------EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ +V++ L V D+MT P V ++E AA ++LE RLP
Sbjct: 75 FIERLIKVKMEEWDVERALEMWKSGKVSDVMTKDPASVHMNDDVEKAADIMLEKNVHRLP 134
Query: 218 VVDADGKLVGIITRGNVVRA 237
VVD DGKLVGI+TR ++++A
Sbjct: 135 VVDDDGKLVGIVTRLDLLKA 154
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
V D+MT V V + + ++ + K LPVV+ GKL+G++T G+++R+
Sbjct: 4 VKDVMTKDVVYVHDNEGIAKVIDIMKKRKISGLPVVNNSGKLIGVVTDGDIIRS 57
>gi|440746999|ref|ZP_20926260.1| CBS domain protein [Mariniradius saccharolyticus AK6]
gi|436484628|gb|ELP40604.1| CBS domain protein [Mariniradius saccharolyticus AK6]
Length = 152
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 83/172 (48%), Gaps = 35/172 (20%)
Query: 74 NSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKL 133
N P S V D MTT L +P T+D+ V L K+I+G PV+D KL
Sbjct: 15 NQTQPIS----VRDHMTT--NLITFRPDDTIDKVLV-----TLASKKISGAPVLDHSGKL 63
Query: 134 VGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 193
VG++S+ D L S+ G+ N+ K + KM D+MT +P
Sbjct: 64 VGIISEVDCL---SVVIKGQYTNT---------------PKFSALVEEKMTKDVMTLSPD 105
Query: 194 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
+ + DAA+L LE K RR PVV DGKL+G I+ +++R ++K T
Sbjct: 106 I-----TIFDAAQLFLEHKIRRFPVV-KDGKLLGQISLSDIIRVFTKLKTTT 151
>gi|221635717|ref|YP_002523593.1| UspA domain protein, putative [Thermomicrobium roseum DSM 5159]
gi|221158173|gb|ACM07291.1| UspA domain protein, putative [Thermomicrobium roseum DSM 5159]
Length = 462
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 8/140 (5%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS--ISGSGRADNS 157
P T +A + ++++++I PV+D D +L+GL+ + D LA + + RA
Sbjct: 314 PVTVGPDATLEQVARLMLDRQIGAVPVVDADGRLLGLIREEDFLAQEKPIPFAAFRA--- 370
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
P++ W ++++ ++ GD+ V V E T L A+L++E R +P
Sbjct: 371 --PQLFGHWLNAEGIERIYAEARTMKAGDVAQAPAVTVTEDTPLSRIAQLMVERDVRHIP 428
Query: 218 VVDADGKLVGIITRGNVVRA 237
VV DGKLVGI+TR +V++A
Sbjct: 429 VVR-DGKLVGIVTRHDVLKA 447
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
D+MTP PV V LE ARL+L+ + +PVVDADG+L+G+I
Sbjct: 308 DIMTPDPVTVGPDATLEQVARLMLDRQIGAVPVVDADGRLLGLI 351
>gi|357633591|ref|ZP_09131469.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
gi|357582145|gb|EHJ47478.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
Length = 218
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 24/166 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
VGD+M+T T ++ + A I+ EK+I PV+D D +LVG+VS+ DL A
Sbjct: 3 VGDWMSTD-------VATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVSERDLKA 55
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
P +T + E+ LLS+ + LMT PV +R + +E A
Sbjct: 56 AS-------------PSSATTLDMY-EMTYLLSELK---IKGLMTRNPVSIRRSDTVERA 98
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
A ++ + K+ LPV+D GK+VGIIT ++ R + I + G Q
Sbjct: 99 ALIMRDRKFGSLPVIDEAGKVVGIITDTDIFRLFVSITGIDQGGIQ 144
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+VGD M+ V E ++ A R++ E K RRLPVVD DG+LVGI++
Sbjct: 2 LVGDWMSTDVATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVS 49
>gi|409437045|ref|ZP_11264193.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
gi|408751277|emb|CCM75349.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
Length = 240
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 6/138 (4%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T V A E ++ RI+G PV+DDD LVG++++ D L ++ + R + +
Sbjct: 11 PITIGASCTVLEAAETMLTNRISGLPVVDDDGVLVGMITEGDFLRRHELN-TERQRSWLQ 69
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
+ S K +E +++G+ V ++M VVV L DA RL+ +RLPV+
Sbjct: 70 SWLASPGKIADE----YVRSHGRRVDEVMNARVVVVSPDAALSDAVRLMERNDIKRLPVI 125
Query: 220 DADGKLVGIITRGNVVRA 237
+DG+LVG+I+R +++RA
Sbjct: 126 -SDGRLVGLISRSDLLRA 142
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V + MT +P+ + + + +AA +L + LPVVD DG LVG+IT G+ +R
Sbjct: 2 IVENAMTSSPITIGASCTVLEAAETMLTNRISGLPVVDDDGVLVGMITEGDFLR 55
>gi|411006741|ref|ZP_11383070.1| CBS domain containing membrane protein [Streptomyces globisporus
C-1027]
Length = 247
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 21/158 (13%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
+TV D M+ P A +E++ E +++ PV+ + ++VG+VS+ DL
Sbjct: 46 HTVSDVMSHA-------PVAVGSHASYRQVVELMAEAKVSALPVLAGEGRVVGVVSEADL 98
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
L ++ GSG + ++D +K+ +V DLM+ V V L
Sbjct: 99 LHKEAFRGSGPPAAA---QLDEAFKS-----------AAVLVEDLMSSPAVTVHADAPLA 144
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+AAR++ +RLPVV+++G L G+++RG++++ L+
Sbjct: 145 EAARIMARKHVKRLPVVNSEGMLEGVVSRGDLLKVFLR 182
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 170 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
+E ++++ V D+M+ APV V + L+ E K LPV+ +G++VG++
Sbjct: 34 SEQEEVIVSVTPHTVSDVMSHAPVAVGSHASYRQVVELMAEAKVSALPVLAGEGRVVGVV 93
Query: 230 TRGNVVR 236
+ +++
Sbjct: 94 SEADLLH 100
>gi|220922314|ref|YP_002497616.1| hypothetical protein Mnod_2338 [Methylobacterium nodulans ORS 2060]
gi|219946921|gb|ACL57313.1| CBS domain containing membrane protein [Methylobacterium nodulans
ORS 2060]
Length = 247
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 27/144 (18%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V A+ +++EKRI+G PV+D D +VG+VS+ DLLA PE+ +
Sbjct: 20 VELAIALMLEKRISGLPVLDPDCAVVGIVSEGDLLA--------------RPELGTARPK 65
Query: 169 FNEVQKLLS---------KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
VQ L+S + G+ VGD+MT V T L++ L+ + +R+P+V
Sbjct: 66 PGWVQYLISPGRLAEAYARERGRRVGDVMTREVVTASPETPLDEIVDLMTRRRIKRVPIV 125
Query: 220 DADGKLVGIITRGNVVRA---ALQ 240
+ G+LVG++TR +++R+ ALQ
Sbjct: 126 EG-GRLVGLVTRADLLRSLRRALQ 148
>gi|86360152|ref|YP_472041.1| hypothetical protein RHE_PC00107 [Rhizobium etli CFN 42]
gi|86284254|gb|ABC93314.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 240
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 102 TTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 161
T A V A ++++ RI+G PV+ + LVG+VS+ D L +S + R + +
Sbjct: 13 TVTASASVAEAARLMLDNRISGLPVVGANGALVGIVSEGDFLRRSELS-TERKRSWLLEW 71
Query: 162 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 221
+ S+ + E +T+G+ V ++MT + T +L DA RL+ + +RLPVV+
Sbjct: 72 LTSSGRIAAE----YVRTHGRRVEEVMTAPVSAIAPTASLSDAVRLMERQEIKRLPVVEG 127
Query: 222 DGKLVGIITRGNVVRAALQIKHATEMGA 249
G+LVGI+ R +++RA Q AT A
Sbjct: 128 -GRLVGIVARSDLLRALSQALPATSTSA 154
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V +MT + V + ++ +AARL+L+ + LPVV A+G LVGI++ G+ +R
Sbjct: 2 LVQAIMTSPAITVTASASVAEAARLMLDNRISGLPVVGANGALVGIVSEGDFLR 55
>gi|374301056|ref|YP_005052695.1| hypothetical protein [Desulfovibrio africanus str. Walvis Bay]
gi|332553992|gb|EGJ51036.1| CBS domain containing membrane protein [Desulfovibrio africanus
str. Walvis Bay]
Length = 152
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 76/131 (58%), Gaps = 8/131 (6%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS--TWKTF 169
A +L+EKRI G PV++ D +LVG++S DL+A ++F +D +++
Sbjct: 24 AARVLLEKRINGAPVVEGD-RLVGILSQTDLVA----QQKTLTMPTLFTLLDGFIPLRSY 78
Query: 170 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
++ + + K + VG+ MT PV VR T + D A++++E K LPVV+ D +LVG+I
Sbjct: 79 EKLDEDMRKISAMTVGEAMTVKPVTVRPDTTITDIAQIMVEKKIHTLPVVEGD-RLVGVI 137
Query: 230 TRGNVVRAALQ 240
+ +V+R L
Sbjct: 138 GKEDVLRTLLN 148
>gi|303247748|ref|ZP_07334017.1| CBS domain containing membrane protein [Desulfovibrio
fructosovorans JJ]
gi|302490832|gb|EFL50731.1| CBS domain containing membrane protein [Desulfovibrio
fructosovorans JJ]
Length = 218
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 24/166 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
VGD+M+ +VV T T D + + A ++ E +I PV+D D KL+G+VS+ DL A
Sbjct: 3 VGDWMSR----NVV--TATGDVSMIK-AGRMMREHKIRRLPVVDKDGKLIGIVSERDLKA 55
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S D+T E+ LLS+ V ++MT +P +R T +E A
Sbjct: 56 ---------ASPS-----DATSLDMYELTYLLSEMK---VKNIMTKSPRFIRPTDTVERA 98
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
A ++ + K LPV+DADGK++GIIT ++ R + I + G Q
Sbjct: 99 ALIMRDLKIGSLPVIDADGKVLGIITDTDIFRLFVSITGIDQDGIQ 144
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+VGD M+ V ++ A R++ E K RRLPVVD DGKL+GI++
Sbjct: 2 LVGDWMSRNVVTATGDVSMIKAGRMMREHKIRRLPVVDKDGKLIGIVS 49
>gi|329938560|ref|ZP_08287985.1| hypothetical protein SGM_3477 [Streptomyces griseoaurantiacus M045]
gi|329302533|gb|EGG46424.1| hypothetical protein SGM_3477 [Streptomyces griseoaurantiacus M045]
Length = 243
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 12/129 (9%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS----TWKTFNE 171
L E R+ G PV+D+D +VG+VS+ DL +A+ + E W T
Sbjct: 30 LAEHRVGGLPVVDEDGHVVGVVSETDLTI-------HQAETRLVHEPPRGRRFAWLT-PR 81
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
++ +K + + G+LMT + V + +AAR ++ + RLPV+D +G+LVGI++R
Sbjct: 82 ARRRTAKAHARTAGELMTTPAITVHAQDTVVEAARTMVRHQVHRLPVLDEEGRLVGIVSR 141
Query: 232 GNVVRAALQ 240
++VR L+
Sbjct: 142 HDLVRTFLR 150
>gi|291296715|ref|YP_003508113.1| hypothetical protein [Meiothermus ruber DSM 1279]
gi|290471674|gb|ADD29093.1| CBS domain containing protein [Meiothermus ruber DSM 1279]
Length = 145
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 26/166 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT P + VP A +I+ + PV+++ +LVG+V+D DL
Sbjct: 3 VKDFMTPD-------PQVVTPDVAVPEAAQIMKKGGFRRLPVVEEG-RLVGIVTDRDL-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
P D+T + E+ L+S+ + VG++MT P+ V +T L+ A
Sbjct: 53 -----------KEAMPS-DATSLSIWEINYLISRLS---VGEIMTRDPISVADTLPLQAA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
A+L+LE K LPVV +GKLVGI+T +V+RA LQ + +GA+
Sbjct: 98 AKLMLEYKVGGLPVVH-EGKLVGIVTVTDVLRAFLQREAELLVGAE 142
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+V D MTP P VV + +AA+++ + +RRLPVV+ +G+LVGI+T
Sbjct: 2 LVKDFMTPDPQVVTPDVAVPEAAQIMKKGGFRRLPVVE-EGRLVGIVT 48
>gi|377820772|ref|YP_004977143.1| putative signal transduction protein [Burkholderia sp. YI23]
gi|357935607|gb|AET89166.1| putative signal transduction protein with CBS domains [Burkholderia
sp. YI23]
Length = 230
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 88/154 (57%), Gaps = 17/154 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--- 143
D MTT + V TTV E + +L++ RI+ PVID + +++G+VS+ DLL
Sbjct: 5 DVMTTA--VVSVTSETTVHELAL-----LLMQHRISAAPVIDANRRVIGMVSEGDLLHRE 57
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+D+ GR S + E+ T + + K++ + VG++MT PV V E +L +
Sbjct: 58 EIDTEKTQGR--QSWWLEMLGTDRGAGD----YIKSHARTVGEIMTREPVCVNEDASLAN 111
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
A +L + +R+PV+ DG+LVGI++R N+V+A
Sbjct: 112 IASVLESRQIKRVPVL-RDGRLVGIVSRSNLVQA 144
>gi|330816985|ref|YP_004360690.1| signal-transduction protein [Burkholderia gladioli BSR3]
gi|327369378|gb|AEA60734.1| signal-transduction protein [Burkholderia gladioli BSR3]
Length = 230
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 12/151 (7%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MT E +H +P ++ EA +L + I+ PV+D D KLVG+VS+ DLL
Sbjct: 5 DVMTP-EVIHA-RPEMSIREAAA-----LLAKHSISALPVLDSDGKLVGIVSEGDLLRRY 57
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
I G+G S + ++ + + E+ K + + V D+MT V V E T L D A
Sbjct: 58 EI-GTGDRHRSWWLQLLT---SNRELASEYVKEHERSVKDVMTAEVVTVYEDTPLADIAE 113
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+L + +R+PV+ +G++ GI++R N+VRA
Sbjct: 114 VLERHRIKRVPVMK-NGRMTGIVSRANLVRA 143
>gi|297583021|ref|YP_003698801.1| CBS domain-containing membrane protein [Bacillus selenitireducens
MLS10]
gi|297141478|gb|ADH98235.1| CBS domain containing membrane protein [Bacillus selenitireducens
MLS10]
Length = 154
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 29/167 (17%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
+V D MT +E +KP T+V++ TA ++L++ +G PV+DD+ L G+VS+ D++
Sbjct: 3 SVKDVMT--KEAVTIKPDTSVED----TA-KLLLQHHFSGVPVVDDEGVLQGVVSEGDII 55
Query: 144 ALDSISGSGRADNSMFPEV----------DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 193
RA + P V DS K E+++ +S T +GDLM +
Sbjct: 56 K--------RASHIQSPAVLEFLGGLIYLDSPKKYMEELKQAMSLT----IGDLMKTEVI 103
Query: 194 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
++E A +L +R PVVD +GK++GII+R ++++ Q
Sbjct: 104 TAHPDDSIEQIATKMLSKNIKRFPVVDEEGKVIGIISRRDIMKHLYQ 150
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 40/59 (67%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
V D+MT V ++ T++ED A+LLL+ + +PVVD +G L G+++ G++++ A I+
Sbjct: 4 VKDVMTKEAVTIKPDTSVEDTAKLLLQHHFSGVPVVDDEGVLQGVVSEGDIIKRASHIQ 62
>gi|410720304|ref|ZP_11359660.1| putative transcriptional regulator, CBS-domain containing protein
[Methanobacterium sp. Maddingley MBC34]
gi|410601086|gb|EKQ55606.1| putative transcriptional regulator, CBS-domain containing protein
[Methanobacterium sp. Maddingley MBC34]
Length = 158
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP------EVDSTWK-T 168
L E +I+G PV++ + +LVG++S+ D++ L + + P E+ K
Sbjct: 28 LRENKISGAPVMNKEGQLVGIISEGDIMRLLEVHSPHI--RLILPSPLDLIELPVRMKYE 85
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+E+ + ++K ++G++MT V + ++ DAA+L+ +RLPV+D+DGK+VGI
Sbjct: 86 MDEIAEDMNKAASLLIGEIMTKKVVTITPDADISDAAQLMDTHDVKRLPVLDSDGKMVGI 145
Query: 229 ITRGNVVRAALQ 240
ITRG+++ A ++
Sbjct: 146 ITRGDIIGAMVR 157
>gi|302392835|ref|YP_003828655.1| hypothetical protein [Acetohalobium arabaticum DSM 5501]
gi|302204912|gb|ADL13590.1| CBS domain containing membrane protein [Acetohalobium arabaticum
DSM 5501]
Length = 148
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 15/128 (11%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE----VDST--WKT 168
+L + I+G PVI+DD ++VG++++ DL+ R FP+ +DS ++
Sbjct: 26 LLSDNEISGLPVINDDGEVVGIITEQDLII--------RDKKLHFPDYIYLLDSIIYLES 77
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
E ++ K G V ++MT + V + T ++ L+LE K R+PV+D +G+LVGI
Sbjct: 78 LREFEEEFKKMIGTQVEEVMTEEVITVNQETPTDEIVELMLEHKINRVPVID-NGELVGI 136
Query: 229 ITRGNVVR 236
I+RG++V+
Sbjct: 137 ISRGDLVK 144
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
D+MT + V + ++D ARLL + + LPV++ DG++VGIIT +++
Sbjct: 5 DIMTEDVITVNQDDTIKDVARLLSDNEISGLPVINDDGEVVGIITEQDLI 54
>gi|329957340|ref|ZP_08297860.1| inosine-5'-monophosphate dehydrogenase [Bacteroides clarus YIT
12056]
gi|328523053|gb|EGF50156.1| inosine-5'-monophosphate dehydrogenase [Bacteroides clarus YIT
12056]
Length = 491
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 33/146 (22%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL+++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSSVADALDLMSEYKIGGIPVVDDEGYLVGIVTNRDLR--------- 144
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLET 211
K K + ++MT +V +TT+LE AA++L E
Sbjct: 145 -----------------------FEKDRSKRIDEVMTKKNIVTTNQTTDLEAAAQILQEY 181
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRA 237
K +LPVVD D KLVG+IT ++ +A
Sbjct: 182 KIEKLPVVDKDNKLVGLITYKDITKA 207
>gi|116249833|ref|YP_765671.1| hypothetical protein RL0067 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254481|emb|CAK05555.1| putative CBS domain protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 222
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V A EI++ ++G PVIDD +LVG++S+ DLL + A E+ ++ T
Sbjct: 20 VRRAAEIMLANHVSGVPVIDDAGRLVGIISEGDLLRRTELGREATA------ELGTSALT 73
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
E ++N V D+M+ P+VV T+L + L+ E +RLPV+ DG LVGI
Sbjct: 74 AEEKATAYVRSNAWRVADVMSCDPIVVEGDTSLARVSALMQEHHIKRLPVM-RDGVLVGI 132
Query: 229 ITRGNVVRA 237
++R ++++A
Sbjct: 133 VSRADLLKA 141
>gi|172065495|ref|YP_001816207.1| signal-transduction protein [Burkholderia ambifaria MC40-6]
gi|171997737|gb|ACB68654.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MC40-6]
Length = 230
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
E V ++L E I+ PVID + KL+G+VS+ DL+ I R + + ST
Sbjct: 17 EMSVQETAKLLAEHSISAVPVIDAEGKLIGIVSEGDLVRRVEIGTHARRRSWWLELLAST 76
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
+ +E K S+T V DLM+ V V E T L + A LL + +R+PVVD +GK+
Sbjct: 77 RELASEYVKEHSQT----VKDLMSVDVVTVAEDTPLSEVAELLERHRIKRVPVVD-NGKV 131
Query: 226 VGIITRGNVVRA 237
G+++R ++VRA
Sbjct: 132 AGLVSRADLVRA 143
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MT + ++++ A+LL E +PV+DA+GKL+GI++ G++VR
Sbjct: 5 DVMTTPVIFASPEMSVQETAKLLAEHSISAVPVIDAEGKLIGIVSEGDLVR 55
>gi|390953892|ref|YP_006417650.1| putative contains C-terminal CBS domains [Aequorivita sublithincola
DSM 14238]
gi|390419878|gb|AFL80635.1| putative transcriptional regulator, contains C-terminal CBS domains
[Aequorivita sublithincola DSM 14238]
Length = 153
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 91/173 (52%), Gaps = 31/173 (17%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWK 132
A + SS V D+MT L +P ++ E +E+L++KRI+G PV+++ +
Sbjct: 11 AKTQKGSSEKIKVSDYMT--RNLITFRPEQSIMEV-----MEVLLKKRISGGPVVNEKNE 63
Query: 133 LVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP 192
LVG++S+ D + S S R N +V K + K + +G+M
Sbjct: 64 LVGIISEGDCMKQLSDS---RYHNHPMEDV----KVEQHMIKNVDTIDGEM--------- 107
Query: 193 VVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
N+ DAA + +E+K+RR P+++ +GKL G I++ +V+RAA+++K T
Sbjct: 108 -------NVLDAANMFVESKHRRFPILE-NGKLAGQISQSDVLRAAMELKGQT 152
>gi|167765435|ref|ZP_02437548.1| hypothetical protein BACSTE_03825 [Bacteroides stercoris ATCC
43183]
gi|167697063|gb|EDS13642.1| inosine-5'-monophosphate dehydrogenase [Bacteroides stercoris ATCC
43183]
Length = 491
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 33/146 (22%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSSVADALGLMSEYKIGGIPVVDDEGHLVGIVTNRDLR--------- 144
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLET 211
K + K + ++MT +V +TT+LE AA++L E
Sbjct: 145 -----------------------FEKDHNKRIDEVMTKDNIVTTNQTTDLEAAAQILQEH 181
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRA 237
K +LPVVD D KLVG+IT ++ +A
Sbjct: 182 KIEKLPVVDKDNKLVGLITYKDITKA 207
>gi|456392178|gb|EMF57521.1| CBS domain-containing protein [Streptomyces bottropensis ATCC
25435]
Length = 230
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 24/161 (14%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYD 141
+TV D MT P V EA + +L ++R++ PV+D + ++VG+VS+ D
Sbjct: 6 HTVSDVMTY--------PVAAVGREAGFKEIVRLLQDRRVSALPVLDGEGRVVGVVSEAD 57
Query: 142 LLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETT 199
LL + DS + ++++L L+K G DLMT + R
Sbjct: 58 LLPKEEFR-------------DSDPDRYTQLRRLSDLAKAGGSTAADLMTSPALTTRPDA 104
Query: 200 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
AAR++ + +RLPVV+ G L GI++R ++++ L+
Sbjct: 105 TSAQAARIMAHARVKRLPVVNEQGMLEGIVSRADLLKVFLR 145
>gi|431799366|ref|YP_007226270.1| hypothetical protein Echvi_4053 [Echinicola vietnamensis DSM 17526]
gi|430790131|gb|AGA80260.1| putative transcriptional regulator, contains C-terminal CBS domains
[Echinicola vietnamensis DSM 17526]
Length = 153
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 31/178 (17%)
Query: 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVI 127
G A +S V + MTT L P T+D +++L +KRI+G PV+
Sbjct: 6 QGVRMAEPQTRASQPILVSNHMTTN--LTTFHPDDTIDHV-----VQVLTQKRISGAPVL 58
Query: 128 DDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDL 187
DD LVG++S+ D L + I G +N ++ + M D+
Sbjct: 59 DDGQNLVGIISEVDCLK-EIIRGK-----------------YNNTPRMAGRVREHMTKDV 100
Query: 188 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
+T P V + DAA LE K RR PV+ DGKL+G I+ +++RA ++K T
Sbjct: 101 VTMDPEV-----TIFDAAHRFLELKIRRFPVL-KDGKLLGQISLSDIIRAMPRLKSET 152
>gi|318041619|ref|ZP_07973575.1| CBS [Synechococcus sp. CB0101]
Length = 144
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 10/130 (7%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA----DNSMFPEVDSTWK 167
A++++ E I+G PV+D+ LVG +++ DL+ +S +G D ++ W
Sbjct: 17 AVKLMSEHHISGLPVVDESGALVGELTEQDLMVRESGFDAGPYVMLLDAVIYLRNPLNWD 76
Query: 168 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 227
EV ++L G VG+LM+ P T L AAR L + +RL V+DA K VG
Sbjct: 77 --KEVHQVL----GSTVGELMSKHPHHCSPDTQLPAAARQLHDRSTQRLFVLDAANKPVG 130
Query: 228 IITRGNVVRA 237
++TRG+VVRA
Sbjct: 131 VLTRGDVVRA 140
>gi|338997445|ref|ZP_08636142.1| hypothetical protein GME_05560 [Halomonas sp. TD01]
gi|338765623|gb|EGP20558.1| hypothetical protein GME_05560 [Halomonas sp. TD01]
Length = 229
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 7/132 (5%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
+A V ++L+E RI+ P++DD+ +++G+VS+ DL+ + S + + S
Sbjct: 17 DANVRDIAQLLLEHRISAVPIVDDERRVLGIVSEGDLMR--RVKDEADDSRSWWLSLFSG 74
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
K E K++G+ ++MT P+ V E L ARLL + +R+PVV DGKL
Sbjct: 75 GKDAGE----YVKSHGRKAHEVMTSKPLTVEENAPLHTIARLLEKHHIKRVPVV-RDGKL 129
Query: 226 VGIITRGNVVRA 237
VGI++R N+++
Sbjct: 130 VGIVSRANLLQG 141
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MTP V V N+ D A+LLLE + +P+VD + +++GI++ G+++R
Sbjct: 5 DIMTPNVVCVGPDANVRDIAQLLLEHRISAVPIVDDERRVLGIVSEGDLMR 55
>gi|421587439|ref|ZP_16032841.1| hypothetical protein RCCGEPOP_02431 [Rhizobium sp. Pop5]
gi|403708085|gb|EJZ22890.1| hypothetical protein RCCGEPOP_02431 [Rhizobium sp. Pop5]
Length = 257
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 12/153 (7%)
Query: 91 TKEELHVVKPTTTVDEAFVPT------ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
T E +V+ T+ VPT A +++++ RI+G PV+D + LVG+VS+ D L
Sbjct: 13 TMESKMLVQAIMTLPVITVPTCCSVAEAAQLMLDNRISGLPVVDTNGALVGIVSEGDFLR 72
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
++ + R + + S K E +T+G+ V ++MT + T ++ DA
Sbjct: 73 RSELN-TQRNRPWLLDWLTSPGKIATE----YVRTHGRRVDEVMTSPVSAIAPTASVSDA 127
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
RL+ +RLPVV+ +GKLVGII R +++RA
Sbjct: 128 VRLMERYDIKRLPVVE-NGKLVGIIARSDLLRA 159
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 167 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 226
+ + L+ + +V +MT + V ++ +AA+L+L+ + LPVVD +G LV
Sbjct: 3 RAHRRYEACLTMESKMLVQAIMTLPVITVPTCCSVAEAAQLMLDNRISGLPVVDTNGALV 62
Query: 227 GIITRGNVVR 236
GI++ G+ +R
Sbjct: 63 GIVSEGDFLR 72
>gi|219848345|ref|YP_002462778.1| hypothetical protein Cagg_1435 [Chloroflexus aggregans DSM 9485]
gi|219542604|gb|ACL24342.1| CBS domain containing protein [Chloroflexus aggregans DSM 9485]
Length = 427
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 9/125 (7%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
+ +L+E+ + PVID D K+VG+V+D DLL R + + + +
Sbjct: 141 VRLLIERGLRAMPVIDADRKVVGIVTDADLLQ--------RGVSQLPLHLQQLLPNDDRA 192
Query: 173 QKLLS-KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+L + + + VG++MTP P + T +L AA ++ + ++RLPVVD +G+LVGII+R
Sbjct: 193 AQLAAVASRPERVGEVMTPNPTTIPATASLAQAALVMTKNDHKRLPVVDNEGRLVGIISR 252
Query: 232 GNVVR 236
++++
Sbjct: 253 SDLLQ 257
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 28/170 (16%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWK 132
A AA +S VG+ MT PTT A + A ++ + PV+D++ +
Sbjct: 193 AQLAAVASRPERVGEVMTPN-------PTTIPATASLAQAALVMTKNDHKRLPVVDNEGR 245
Query: 133 LVGLVSDYDLL--ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTP 190
LVG++S DLL ++ + SG ++ F VG++M
Sbjct: 246 LVGIISRSDLLQTVANNFAISGETLSAEF-------------------VTATTVGEVMAR 286
Query: 191 APVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
VV T+L + +L T RR V+D D +++GI++ G+++R A++
Sbjct: 287 DVPVVTPDTSLSETLDRILSTPRRRAVVIDQDRRVIGIVSDGDILRRAMR 336
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFP-----VIDDDWKLVGLVS 138
TVG+ M ++ VV P T++ E RI P VID D +++G+VS
Sbjct: 279 TVGEVMA--RDVPVVTPDTSLSETL----------DRILSTPRRRAVVIDQDRRVIGIVS 326
Query: 139 DYDLLALDSISGSGRADNSMFPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVV 194
D D+L RA + P + + + +L + ++MT +
Sbjct: 327 DGDILR--------RAMRPVSPGLLQRFAMWIGGGTRSPELALALQNQTAANVMTSPVIT 378
Query: 195 VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
V T + A ++ + +RLPV+D G+LVG++ R ++ A L
Sbjct: 379 VTPDTPITTAIEQMIAHRIKRLPVIDDQGRLVGMVGRAALLGALL 423
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
V +MT V V T + + RLL+E R +PV+DAD K+VGI+T ++++
Sbjct: 120 VAHVMTHDVVSVTVDTPVGEVVRLLIERGLRAMPVIDADRKVVGIVTDADLLQ 172
>gi|386393723|ref|ZP_10078504.1| CBS-domain-containing membrane protein [Desulfovibrio sp. U5L]
gi|385734601|gb|EIG54799.1| CBS-domain-containing membrane protein [Desulfovibrio sp. U5L]
Length = 218
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 24/166 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
VGD+M+T T ++ + A I+ EK+I PV+D D +LVG+VS+ DL A
Sbjct: 3 VGDWMSTD-------VATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVSERDLKA 55
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
P +T + E+ LLS+ + +MT P+ +R + +E A
Sbjct: 56 AS-------------PSSATTLDMY-EMTYLLSEMK---IKGIMTKNPLSIRRSDTVERA 98
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
A ++ + K+ LPVVD GK+VGIIT ++ R + I + G Q
Sbjct: 99 ALIMRDRKFGSLPVVDEAGKVVGIITDTDIFRLFVSITGIDQGGIQ 144
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+VGD M+ V E ++ A R++ E K RRLPVVD DG+LVGI++
Sbjct: 2 LVGDWMSTDVATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVS 49
>gi|212704299|ref|ZP_03312427.1| hypothetical protein DESPIG_02354 [Desulfovibrio piger ATCC 29098]
gi|212672261|gb|EEB32744.1| CBS domain protein [Desulfovibrio piger ATCC 29098]
Length = 218
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 17/136 (12%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
+L E +I PV+DD ++VG++SD D + G+ + +T +E+Q
Sbjct: 26 LLKEHQIRRLPVVDDQNRVVGIISDRD------VKGASPSK--------ATALEVHEMQY 71
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
LL++ K D+MT PV ++ ++E AA L+++ K+ LPVV D KLVGIIT ++
Sbjct: 72 LLAELKAK---DIMTAKPVTIKPWDSVEQAAILMMDKKFGGLPVVSEDNKLVGIITDQDI 128
Query: 235 VRAALQIKHATEMGAQ 250
+ + I A G Q
Sbjct: 129 FKLLINITGARVEGMQ 144
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 145
D MT K +KP +V++A + ++++K+ G PV+ +D KLVG+++D D+ L
Sbjct: 80 DIMTAKPV--TIKPWDSVEQAAI-----LMMDKKFGGLPVVSEDNKLVGIITDQDIFKL 131
>gi|288932855|ref|YP_003436915.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
gi|288895103|gb|ADC66640.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
Length = 259
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 42/157 (26%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKR-ITGFPVIDDDWKLVGLVSDYDLL 143
V D+MT +++ VVKP T+ E L+EK GFPVIDD+ ++G +S DLL
Sbjct: 5 VKDYMT--KDVVVVKPDQTIKEVID------LIEKTGHDGFPVIDDNGIVIGYISSRDLL 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
K V D+M+ +V RE +L D
Sbjct: 57 ---------------------------------RKNLDTKVKDVMSKKLIVAREHMDLRD 83
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
AAR++ T +LPV+D GKL+GII+ +V+R+ ++
Sbjct: 84 AARVMFRTGRSKLPVIDEKGKLIGIISNTDVIRSQIE 120
>gi|386828147|ref|ZP_10115254.1| CBS-domain-containing membrane protein [Beggiatoa alba B18LD]
gi|386429031|gb|EIJ42859.1| CBS-domain-containing membrane protein [Beggiatoa alba B18LD]
Length = 142
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 25/158 (15%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV + M+ + L+ +KPT TV +A +++++K I P++D+ +GL++ +D+L
Sbjct: 3 TVKELMSHR--LYTLKPTDTVHQAR-----QLMLDKHIRHIPIVDNHGTFLGLITKHDIL 55
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
AL S S AD E Q+ + +G + +M VV +E+TNL +
Sbjct: 56 AL---SVSELAD--------------IEPQERIEIESGIPLSQVMLTEVVVAQESTNLLE 98
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
AAR +LE K+ LPV D +L G++T + V+ A+ +
Sbjct: 99 AARFILEQKHGCLPVF-RDQQLTGMLTEADFVKLAIHL 135
>gi|366163366|ref|ZP_09463121.1| putative signal transduction protein with CBS domains [Acetivibrio
cellulolyticus CD2]
Length = 149
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 28/163 (17%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D M+T ++ +K TTV+E +L EK I+G PV+DD K++G+VS+ DLL D
Sbjct: 5 DIMST--DVIAIKKDTTVEEIA-----HLLSEKNISGVPVLDDSSKVIGMVSEKDLLYKD 57
Query: 147 SISGSGRADNSMFPEVDS---------TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 197
FP V + K +NE + L T + ++MT V +
Sbjct: 58 I--------EPHFPPVVEILGGLIFLKSVKQYNEELRKLVATRAE---EIMTKKVVTIGP 106
Query: 198 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
T +E A L++E R+PVVD + KLVGII+R +V++ Q
Sbjct: 107 DTEVERIAELMIEKDINRIPVVD-NQKLVGIISRADVIKYISQ 148
>gi|150003021|ref|YP_001297765.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus ATCC
8482]
gi|149931445|gb|ABR38143.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus ATCC
8482]
Length = 482
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E RI G PV+DD+ LVG+V++ DL
Sbjct: 85 ENGMIYDPVTIKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDL---------- 134
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + M +D ++++K N V ++T++E A+R+L E K
Sbjct: 135 RFEKDMDKRID----------EVMTKEN-----------IVTTNQSTDMEAASRILQEHK 173
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD +GKLVG+IT ++ +A
Sbjct: 174 IEKLPVVDKEGKLVGLITYKDITKA 198
>gi|395777171|ref|ZP_10457686.1| hypothetical protein Saci8_45729 [Streptomyces acidiscabies 84-104]
Length = 222
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 78/156 (50%), Gaps = 18/156 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
VG MT E +H V P T E +L RI+G PV+D D K++G+VS+ DLLA
Sbjct: 6 VGSVMTA-EVVHAV-PDTPFKEVA-----RLLSRHRISGLPVVDGDDKVLGVVSETDLLA 58
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
P + ++ +K + G LM+ PV V + +A
Sbjct: 59 -----------RQAAPVASGPARLTRAARRRTAKATARTAGQLMSGPPVTVHADDTIAEA 107
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
AR + E + RLPV+D + +LVGI+TRG+++R L+
Sbjct: 108 ARTMAERRVERLPVLDVEDRLVGIVTRGDLLRVFLR 143
>gi|212690533|ref|ZP_03298661.1| hypothetical protein BACDOR_00015 [Bacteroides dorei DSM 17855]
gi|237708011|ref|ZP_04538492.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|265754203|ref|ZP_06089392.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|345515918|ref|ZP_08795415.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
5_1_36/D4]
gi|423229920|ref|ZP_17216325.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL02T00C15]
gi|423241573|ref|ZP_17222685.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL03T12C01]
gi|423247010|ref|ZP_17228061.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL02T12C06]
gi|212666882|gb|EEB27454.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei DSM
17855]
gi|229436549|gb|EEO46626.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
5_1_36/D4]
gi|229457997|gb|EEO63718.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|263234912|gb|EEZ20467.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|392632711|gb|EIY26669.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL02T00C15]
gi|392633771|gb|EIY27709.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL02T12C06]
gi|392641159|gb|EIY34944.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL03T12C01]
Length = 491
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E RI G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + M +D ++++K N V ++T++E A+++L E K
Sbjct: 144 RFEKDMDKRID----------EVMTKEN-----------IVTTNQSTDMEAASQILQEHK 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD DGKLVG+IT ++ +A
Sbjct: 183 IEKLPVVDKDGKLVGLITYKDITKA 207
>gi|410696692|gb|AFV75760.1| putative transcriptional regulator, contains C-terminal CBS domains
[Thermus oshimai JL-2]
Length = 150
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 15/154 (9%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
++L P E + A EIL+EKR G PV+D + +L+GL+ DLL
Sbjct: 4 QDLMTQNPVCVGPEETLERAAEILLEKRYGGLPVVDGEGRLLGLLQVEDLLP-------- 55
Query: 153 RADNSMFPEVDSTWKTFNE------VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
R +N F +V++ W+ F E ++++ + V M V L +A R
Sbjct: 56 RPENIPFSDVEA-WQLFGEWVDEGVLEEIYRRYQKTPVEAAMQREIPRVHPEDPLGEALR 114
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+L+ T R LPVVD +G++VGIITR + ++ L+
Sbjct: 115 ILVTTGVRHLPVVDGEGRVVGIITRSDFLKFFLR 148
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
V DLMT PV V LE AA +LLE +Y LPVVD +G+L+G++
Sbjct: 3 VQDLMTQNPVCVGPEETLERAAEILLEKRYGGLPVVDGEGRLLGLL 48
>gi|399911758|ref|ZP_10780072.1| hypothetical protein HKM-1_18687 [Halomonas sp. KM-1]
Length = 231
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
+L+E I+ PV++DD K++G+VS+ DL+ +G+ R + S + N +
Sbjct: 26 LLLEHNISALPVVEDDGKVLGIVSEGDLMRRVE-NGTERRKSWWL---KSIFAGANNASE 81
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
+ K++ + ++MTP P+ + E L A+LL + +R+PVV DGKLVGI++R N+
Sbjct: 82 YI-KSHARKAHEIMTPNPITIDEDEPLHRVAKLLEKHHIKRVPVV-RDGKLVGIVSRANL 139
Query: 235 VRA 237
+R
Sbjct: 140 LRG 142
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
D+MTP + V T++ + ARLLLE LPVV+ DGK++GI++ G+++R ++++ T
Sbjct: 5 DVMTPRVITVSPETDVREIARLLLEHNISALPVVEDDGKVLGIVSEGDLMR---RVENGT 61
Query: 246 E 246
E
Sbjct: 62 E 62
>gi|333376766|ref|ZP_08468502.1| inosine-5'-monophosphate dehydrogenase [Dysgonomonas mossii DSM
22836]
gi|332885979|gb|EGK06223.1| inosine-5'-monophosphate dehydrogenase [Dysgonomonas mossii DSM
22836]
Length = 491
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 33/151 (21%)
Query: 88 FMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 147
F+ E + P + + + V AL ++ E +I G PV+D + +LVG+V++ DL
Sbjct: 89 FVKRAENGMISNPVSILRDKTVGHALAMMAEYKIGGIPVVDTNNRLVGIVTNRDL----- 143
Query: 148 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAAR 206
+ NE ++ D+MT ++ R+TT+LE AA
Sbjct: 144 ----------------RFRRDMNE-----------LIDDVMTKENIITTRQTTDLEAAAD 176
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+L + K +LPVVD+D KL+G+IT ++ +A
Sbjct: 177 ILQQHKIEKLPVVDSDNKLIGLITYKDITKA 207
>gi|294775656|ref|ZP_06741164.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus PC510]
gi|319642193|ref|ZP_07996853.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_40A]
gi|345518194|ref|ZP_08797649.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|423314878|ref|ZP_17292810.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus
CL09T03C04]
gi|254836462|gb|EET16771.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|294450500|gb|EFG18992.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus PC510]
gi|317386179|gb|EFV67098.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_40A]
gi|392681060|gb|EIY74422.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus
CL09T03C04]
Length = 491
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E RI G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + M +D ++++K N V ++T++E A+R+L E K
Sbjct: 144 RFEKDMDKRID----------EVMTKEN-----------IVTTNQSTDMEAASRILQEHK 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD +GKLVG+IT ++ +A
Sbjct: 183 IEKLPVVDKEGKLVGLITYKDITKA 207
>gi|198276171|ref|ZP_03208702.1| hypothetical protein BACPLE_02360 [Bacteroides plebeius DSM 17135]
gi|198270983|gb|EDY95253.1| inosine-5'-monophosphate dehydrogenase [Bacteroides plebeius DSM
17135]
Length = 491
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL+++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSVVKDALDLMAEYKIGGIPVVDDENYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + + +D ++++K N ++T P T++E A+++L E K
Sbjct: 144 RFEKDLNKRID----------EVMTKEN------IVTTEP-----GTDMETASKILQENK 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD DGKL+G+IT ++ +A
Sbjct: 183 IEKLPVVDKDGKLIGLITYKDITKA 207
>gi|375011247|ref|YP_004988235.1| hypothetical protein [Owenweeksia hongkongensis DSM 17368]
gi|359347171|gb|AEV31590.1| CBS domain-containing protein [Owenweeksia hongkongensis DSM 17368]
Length = 151
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 33/178 (18%)
Query: 70 TLTANSAAPS--SGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVI 127
+ A P S V DFMTTK T VD+ + ++IL+EKRI+G PV+
Sbjct: 4 SFQGQQAKPQTESQQVVVRDFMTTK------ITTFQVDQT-MHDVIQILIEKRISGGPVV 56
Query: 128 DDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDL 187
D D LVG++S+ D L ++ G K N S + G V +
Sbjct: 57 DVDNHLVGVISEGDCLK-QAVKG----------------KYLN------SPSLGATVSEC 93
Query: 188 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
M V N+ DAA++ L + RR PVV+ +GKL+G I++ ++++A +K T
Sbjct: 94 MVTEVKTVSPNLNILDAAQMFLHLRLRRFPVVE-EGKLLGQISQKDIMKAIHNLKETT 150
>gi|91773317|ref|YP_566009.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
gi|91712332|gb|ABE52259.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
Length = 154
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 88/159 (55%), Gaps = 13/159 (8%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
V D M++ + V P T+ + ++L +K I+G PV+D+ K+VG+VS+ DL
Sbjct: 1 MNVKDIMSSN--VIVCSPQDTIS-----STAQLLKKKNISGVPVVDEG-KVVGIVSEVDL 52
Query: 143 LALDSI-SGSGRADNSMFPEVDSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRET 198
L L +I G S F ++ + + + +K+LS K V D+M +
Sbjct: 53 LKLLNIPEHGGLWLPSPFEIIEIPIRELIGWEDTKKMLSDVGSKPVSDIMEKDVFTIGLE 112
Query: 199 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+++EDA+R + K RLPVVD +G++VG+ITRG+++R
Sbjct: 113 SSVEDASRSMSRHKINRLPVVD-NGEIVGLITRGDIIRG 150
>gi|209517837|ref|ZP_03266671.1| CBS domain containing membrane protein [Burkholderia sp. H160]
gi|209501670|gb|EEA01692.1| CBS domain containing membrane protein [Burkholderia sp. H160]
Length = 230
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
+ A ++ V+ I G PV+D + +++G+VS DLL +G+GR + E+ S+ +
Sbjct: 20 IHDAAKLFVDHHIGGMPVLDANGRVIGIVSQGDLLHRVE-TGTGRGKRRWWLELLSS--S 76
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
E K +G +VGD+M + + E L A L+ +R+PV+ DG+LVGI
Sbjct: 77 AREQAARYVKEHGHIVGDVMCDNVISIPEDMPLNQIADLMGRRHLKRVPVL-KDGRLVGI 135
Query: 229 ITRGNVVRA 237
++R N++RA
Sbjct: 136 VSRSNLIRA 144
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 34/51 (66%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MT + + + DAA+L ++ +PV+DA+G+++GI+++G+++
Sbjct: 5 DIMTSSVITATPDMTIHDAAKLFVDHHIGGMPVLDANGRVIGIVSQGDLLH 55
>gi|189461625|ref|ZP_03010410.1| hypothetical protein BACCOP_02284 [Bacteroides coprocola DSM 17136]
gi|189431655|gb|EDV00640.1| inosine-5'-monophosphate dehydrogenase [Bacteroides coprocola DSM
17136]
Length = 491
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL+++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSTVKDALDLMAEYKIGGIPVVDDENYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + M +D ++++K N ++T P T++E A+R+L E K
Sbjct: 144 RFEKDMTKRID----------EVMTKEN------IVTTEP-----GTDMETASRILQENK 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVV DGKLVG+IT ++ +A
Sbjct: 183 IEKLPVVGKDGKLVGLITYKDITKA 207
>gi|290955610|ref|YP_003486792.1| hypothetical protein SCAB_10481 [Streptomyces scabiei 87.22]
gi|260645136|emb|CBG68222.1| hypothetical protein SCAB_10481 [Streptomyces scabiei 87.22]
Length = 244
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
VG MTT VV+ D F A +L RI+G PVIDDD K++G++S+ DL+
Sbjct: 6 VGSVMTTD----VVR--AEYDTPFKEVA-RLLAGHRISGLPVIDDDEKVIGVISETDLMV 58
Query: 145 LDSISGSGRAD-NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ + FP T + K ++T G+ LMT PV V + +
Sbjct: 59 RQARTPDPYGQPRHRFPFAVLTRAARRQAVKAEARTAGR----LMTEPPVTVHADDTIVE 114
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
AAR + + RLPVVD + +LVGI+ R ++++ L+
Sbjct: 115 AARTMARHRVERLPVVDEEERLVGIVCRRDLLQVFLR 151
>gi|186470680|ref|YP_001861998.1| hypothetical protein Bphy_5888 [Burkholderia phymatum STM815]
gi|184196989|gb|ACC74952.1| CBS domain containing membrane protein [Burkholderia phymatum
STM815]
Length = 242
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 71 LTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDD 130
+T A + D MTT T + + A + V+ RI+G PV+D +
Sbjct: 1 MTTRRAQAKGAIMRALDIMTTS-------VVTATPDMSIHDAARLFVDNRISGMPVVDGE 53
Query: 131 WKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTP 190
++VG+VS DLL +G+G + +D + E K + +VGD+M
Sbjct: 54 GQVVGIVSQGDLLHRVE-NGTGHGKRRWW--LDFLLSSPREQAARYVKEHAHVVGDVMCD 110
Query: 191 APVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ + E L+ A L+ +R+PV+ DGKLVGI++R N++RA
Sbjct: 111 RVISITEDMPLDRIADLMERRHLKRVPVL-KDGKLVGIVSRSNLIRA 156
>gi|315506341|ref|YP_004085228.1| cbs domain containing membrane protein [Micromonospora sp. L5]
gi|315412960|gb|ADU11077.1| CBS domain containing membrane protein [Micromonospora sp. L5]
Length = 234
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
+++L E+ +T PV+D+ +++G+VS+ DL+ G R + + P+
Sbjct: 27 VDVLTERHVTAAPVVDETRRVLGVVSEADLMYKVEFLGQPR-ERRILPD--------RHR 77
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
++ +K + DLMT PV + + +AARL+ +RLPVV+ G+LVGI+TRG
Sbjct: 78 REARAKAGATLAADLMTAPPVTITPDATIVEAARLMDARGVKRLPVVNDLGRLVGIVTRG 137
Query: 233 NVVRAALQ 240
++++ L+
Sbjct: 138 DLLKVHLR 145
>gi|91975830|ref|YP_568489.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
BisB5]
gi|91682286|gb|ABE38588.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 168
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 25/167 (14%)
Query: 76 AAPSSGVYTVG----DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKR-ITGFPVIDDD 130
PS+ V +G F+ H+ +P +V LE E+ +PV++D
Sbjct: 14 CTPSTAVRLIGISLYKFLEAIVADHMTRPVKSVSREMTMRELEDQFERDDYNAYPVLEDS 73
Query: 131 WKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTP 190
+ +GLV+ YD L + + M P D L+++T VGD+MTP
Sbjct: 74 -RAIGLVTKYDFLNCFAFHPT-----QMLPHYDD----------LMNRT----VGDIMTP 113
Query: 191 APVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ V T L +L++E + R +PV+DAD KL GII+R +V++A
Sbjct: 114 DFIYVHADTKLTRVLQLMVEHQTRSIPVLDADRKLEGIISREDVIKA 160
>gi|302339945|ref|YP_003805151.1| CBS domain containing membrane protein [Spirochaeta smaragdinae DSM
11293]
gi|301637130|gb|ADK82557.1| CBS domain containing membrane protein [Spirochaeta smaragdinae DSM
11293]
Length = 413
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P T + V ++ LV++ + PV D +VG+V+ DL+ + +++
Sbjct: 125 QPVTAHPDWSVRETIQRLVDEHLKALPVTDKQGNVVGMVTQGDLMKHGGMPIRLGLLSTL 184
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
E STW + K+N + + ++MTP P + + +A L++ +RLPV
Sbjct: 185 PKEERSTW---------MEKSNNRNLSEIMTPHPQTINADQKVSEALHLMVRKALKRLPV 235
Query: 219 VDADGKLVGIITRGNVVR---AALQIKHAT 245
VD +GKL GI+ R +++R + +Q H T
Sbjct: 236 VDGNGKLCGILARIDLLRLLSSKVQTAHET 265
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 29/171 (16%)
Query: 74 NSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPT------ALEILVEKRITGFPVI 127
+A +SG T G+ +L +V+ D +P+ A++IL +K VI
Sbjct: 260 QTAHETSGPSTGGN------QLQLVRDVVLRDRLALPSHMPLREAIDILAQKAAQRAAVI 313
Query: 128 DDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM-VGD 186
D D LVGLV+D L+ + +D T +++ ++ + +
Sbjct: 314 DTDKHLVGLVTDSILMRV----------------IDKKTSTILPLRRFAARRAESLQLSQ 357
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+M V V E T++++A RL+ E +R+PVVDA+GK G+I R +++ A
Sbjct: 358 VMKREVVRVTEETSVDEAIRLMTEQGLKRIPVVDAEGKFCGMIRRDSILIA 408
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 15/143 (10%)
Query: 94 ELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 153
E+ P T + V AL ++V K + PV+D + KL G+++ DLL L S S
Sbjct: 203 EIMTPHPQTINADQKVSEALHLMVRKALKRLPVVDGNGKLCGILARIDLLRLLS-SKVQT 261
Query: 154 ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 213
A + P N++Q +V D++ + + L +A +L +
Sbjct: 262 AHETSGPSTGG-----NQLQ---------LVRDVVLRDRLALPSHMPLREAIDILAQKAA 307
Query: 214 RRLPVVDADGKLVGIITRGNVVR 236
+R V+D D LVG++T ++R
Sbjct: 308 QRAAVIDTDKHLVGLVTDSILMR 330
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V D+MT PV ++ + + L++ + LPV D G +VG++T+G++++
Sbjct: 117 LVRDVMTEQPVTAHPDWSVRETIQRLVDEHLKALPVTDKQGNVVGMVTQGDLMK 170
>gi|316935767|ref|YP_004110749.1| putative signal transduction protein [Rhodopseudomonas palustris
DX-1]
gi|315603481|gb|ADU46016.1| putative signal transduction protein with CBS domains
[Rhodopseudomonas palustris DX-1]
Length = 243
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 24/141 (17%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
EA + A +++ I+G PV+DDD KL+G++S+ D + RA E+ +
Sbjct: 17 EASIVDAANAMIDNHISGLPVVDDDGKLIGIISEGDFIR--------RA------EIGTE 62
Query: 166 WKTFNEVQKLLS---------KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
K ++ LL +G+ VG++MT P V E T++E +L+ + +R
Sbjct: 63 RKRGRWLRMLLGPGTCAGDFVHEHGRKVGEVMTRHPYTVTEETSIETIVKLMEKHHVKRF 122
Query: 217 PVVDADGKLVGIITRGNVVRA 237
PV+ D LVGI+TR N++RA
Sbjct: 123 PVMRGD-LLVGIVTRKNLLRA 142
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+MT V + ++ DAA +++ LPVVD DGKL+GII+ G+ +R A
Sbjct: 6 IMTRQVVTIGPEASIVDAANAMIDNHISGLPVVDDDGKLIGIISEGDFIRRA 57
>gi|410463616|ref|ZP_11317120.1| CBS-domain-containing membrane protein [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409983278|gb|EKO39663.1| CBS-domain-containing membrane protein [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 218
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 81/166 (48%), Gaps = 24/166 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
VGD+M+T T ++ + A I+ E++I PV+D D KLVG+VS+ DL A
Sbjct: 3 VGDWMSTD-------VATATEDVSMIKAGRIMRERKIRRLPVVDKDGKLVGIVSERDLKA 55
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
S +T E+ LLS+ K + MT PV +R T +E A
Sbjct: 56 ASPSS--------------ATSLDMYEMTYLLSELKVKAI---MTKDPVRIRRTDTVERA 98
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
A ++ + K+ LPVVD K+VGIIT ++ R + I + G Q
Sbjct: 99 ALIMRDRKFGSLPVVDEADKVVGIITDTDIFRLFVSITGIDQGGIQ 144
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+VGD M+ E ++ A R++ E K RRLPVVD DGKLVGI++
Sbjct: 2 LVGDWMSTDVATATEDVSMIKAGRIMRERKIRRLPVVDKDGKLVGIVS 49
>gi|392382251|ref|YP_005031448.1| conserved hypothetical protein with CBS domain [Azospirillum
brasilense Sp245]
gi|356877216|emb|CCC98025.1| conserved hypothetical protein with CBS domain [Azospirillum
brasilense Sp245]
Length = 233
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 17/151 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MT ++ + P TV EA + ++E RI+G PV D + +L+G++S+ DLL
Sbjct: 5 DIMT--RQVVTIGPDATVTEAA-----KRMLENRISGLPVCDSNGRLLGVISEGDLLRRT 57
Query: 147 SISGSGRADN--SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
RA +MF + + +K++G+ V D MT + + V E T L++
Sbjct: 58 ETGTVRRASWWLAMFAGAPNQAADY-------TKSHGRHVRDAMTESLISVTEETPLDEV 110
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
RL+ + +R+PV++ +GKLVGI++R N++
Sbjct: 111 VRLMEGNRIKRVPVLN-NGKLVGIVSRANLL 140
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MT V + + +AA+ +LE + LPV D++G+L+G+I+ G+++R
Sbjct: 5 DIMTRQVVTIGPDATVTEAAKRMLENRISGLPVCDSNGRLLGVISEGDLLR 55
>gi|384532132|ref|YP_005717736.1| putative signal transduction protein [Sinorhizobium meliloti
BL225C]
gi|384541151|ref|YP_005725234.1| hypothetical protein SM11_pC1352 [Sinorhizobium meliloti SM11]
gi|333814308|gb|AEG06976.1| putative signal transduction protein with CBS domains
[Sinorhizobium meliloti BL225C]
gi|336036494|gb|AEH82425.1| conserved hypothetical protein [Sinorhizobium meliloti SM11]
Length = 223
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 90/163 (55%), Gaps = 24/163 (14%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
V D MTTK VVK P +V +A +++ + ++G PV+DDD +L+G++S+ DL
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQA-----AKLMFDHHVSGVPVVDDDGRLLGVISEGDL 53
Query: 143 LALDSI-SGSG--RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 199
+ + SG+ AD ++ P+ + + + + + VGD+MT PV + E
Sbjct: 54 IRRTELCSGASVLMADMAIDPD--------DRANAFIRRCSWR-VGDVMTANPVTIEEEA 104
Query: 200 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
L A L+ E +R+PV+ DG+LVGI++R ++++A K
Sbjct: 105 PLARVAGLMQERGIKRIPVM-RDGELVGIVSRADLLQAIFSTK 146
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V D+MT V + ++ AA+L+ + +PVVD DG+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIR 55
>gi|282857772|ref|ZP_06266981.1| CBS domain protein [Pyramidobacter piscolens W5455]
gi|282584442|gb|EFB89801.1| CBS domain protein [Pyramidobacter piscolens W5455]
Length = 155
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 12/160 (7%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALD 146
M T E+L T + E V A+ +L ++G PV+DD W+LVG +S+ D+L L
Sbjct: 5 MVTAEQLMKRDLTAVMAEDTVEDAMHVLRSHSLSGVPVVDDQWRLVGFLSESDILRSVLP 64
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
S D+ ++ E + K F++V+ +V D M V+ TN+ + A
Sbjct: 65 SYLEILAQDSFLYGEHELLVKKFSQVR-------AGVVRDYMQACCQSVQPETNIMNVAD 117
Query: 207 LLLETKYRRLPVVDADGKLV-GIITRGNVVRAALQIKHAT 245
L+L K +RLPVV +G+L+ GII R ++ + +A+
Sbjct: 118 LMLRLKVKRLPVV--EGRLLMGIIDRSDLCEYLMNSGNAS 155
>gi|239906907|ref|YP_002953648.1| hypothetical protein DMR_22710 [Desulfovibrio magneticus RS-1]
gi|239796773|dbj|BAH75762.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 218
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 24/166 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
VGD+M+T T ++ + A I+ +K+I PV+D D KLVG++S+ DL A
Sbjct: 3 VGDWMSTD-------VATATEDVSMIKAGRIMRDKKIRRLPVVDKDGKLVGIISERDLKA 55
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S +D E+ LLS+ K + MT PV +R T +E A
Sbjct: 56 ---------ASPSTATSLD-----MYEMTYLLSELKVKAI---MTKDPVRIRRTDTVERA 98
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
A ++ + K+ LPVVD K+VGIIT ++ R + I + G Q
Sbjct: 99 ALIMRDRKFGSLPVVDETNKVVGIITDTDIFRLFVSITGIDQGGIQ 144
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+VGD M+ E ++ A R++ + K RRLPVVD DGKLVGII+
Sbjct: 2 LVGDWMSTDVATATEDVSMIKAGRIMRDKKIRRLPVVDKDGKLVGIIS 49
>gi|448746918|ref|ZP_21728582.1| Uncharacterized protein HALTITAN_1531 [Halomonas titanicae BH1]
gi|445565428|gb|ELY21538.1| Uncharacterized protein HALTITAN_1531 [Halomonas titanicae BH1]
Length = 236
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 79/133 (59%), Gaps = 9/133 (6%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSISGSGRADNSMFPEVDS 164
+A V ++L++ RI+ PV+D + +++G+VS+ DL+ + S S G +S + + +
Sbjct: 24 DAEVREIAQLLLKHRISAVPVVDSERRVIGIVSEGDLMRRVKSDSDHG---HSWWLSLFT 80
Query: 165 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 224
K + K++G+ ++MTP P+ V E T L AR+L + +R+PV+ DGK
Sbjct: 81 GGKDAGD----YVKSHGRKAHEVMTPNPMTVEENTPLHTIARMLEKHHIKRVPVL-RDGK 135
Query: 225 LVGIITRGNVVRA 237
LVGI++R N+++
Sbjct: 136 LVGIVSRANLLQG 148
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MTP V V + + A+LLL+ + +PVVD++ +++GI++ G+++R
Sbjct: 12 DIMTPKVVSVGPDAEVREIAQLLLKHRISAVPVVDSERRVIGIVSEGDLMR 62
>gi|315655909|ref|ZP_07908807.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii ATCC 51333]
gi|315489973|gb|EFU79600.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii ATCC 51333]
Length = 212
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 76/152 (50%), Gaps = 19/152 (12%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P T A VP A+E++ IT PV+ D KL G+VS DL N
Sbjct: 10 NPFTIDSGATVPDAIELMQAHGITKLPVLHD-GKLCGVVSQLDL-------------NRA 55
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
P D+T +F EV LLSK + +M P + LE+AA L+ +TK LPV
Sbjct: 56 LPS-DATSLSFGEVAYLLSKLK---IYKIMQKNPPTIAPDAMLEEAAILMRDTKVEILPV 111
Query: 219 VDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+D +GK+VG+IT +V+ A + I A E G +
Sbjct: 112 LD-EGKVVGVITESDVLDAFIDINGAREPGTR 142
>gi|383770464|ref|YP_005449527.1| hypothetical protein S23_22020 [Bradyrhizobium sp. S23321]
gi|381358585|dbj|BAL75415.1| hypothetical protein S23_22020 [Bradyrhizobium sp. S23321]
Length = 242
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 11/140 (7%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P T++ EA I++++ I+G V+DD KLVG+VS+ D + I G+GR
Sbjct: 14 VTPDTSIVEA-----ANIMLKRHISGLTVVDDSGKLVGVVSEGDFIRRSEI-GTGRKRGR 67
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ K+ ++ +G+ V ++MT PV + E T L + L+ +RLP
Sbjct: 68 WLRFILGPGKSASD----FVHEHGRKVSEVMTAKPVTITEDTALAEIVDLMERNNVKRLP 123
Query: 218 VVDADGKLVGIITRGNVVRA 237
VV D K+VGI++R N+++A
Sbjct: 124 VVRGD-KVVGIVSRANLLQA 142
>gi|46580320|ref|YP_011128.1| hypothetical protein DVU1911 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602299|ref|YP_966699.1| hypothetical protein Dvul_1253 [Desulfovibrio vulgaris DP4]
gi|387153254|ref|YP_005702190.1| hypothetical protein Deval_1396 [Desulfovibrio vulgaris RCH1]
gi|46449737|gb|AAS96387.1| CBS domain protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120562528|gb|ABM28272.1| CBS domain containing protein [Desulfovibrio vulgaris DP4]
gi|311233698|gb|ADP86552.1| CBS domain containing membrane protein [Desulfovibrio vulgaris
RCH1]
Length = 150
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 148
M ++ P T + + A ILVE++ G PV+DD +LVG++ DL I
Sbjct: 1 MLKARDIMTASPVTVAPDTEIAKAARILVERKFNGLPVVDDSGRLVGVICQSDL-----I 55
Query: 149 SGSGRAD-NSMFPEVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 205
+ + + S F +D + +E+ + + + + +V MT PV V T +++ A
Sbjct: 56 TQHKKLNIPSFFTVLDGFIPLTSMSELDEQMRRISATIVKHAMTADPVTVTPETAIDEIA 115
Query: 206 RLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
L++++K LPVV+ +GKLVG+I + +++R
Sbjct: 116 SLMVDSKLHTLPVVE-NGKLVGVIGKEDLLR 145
>gi|39937306|ref|NP_949582.1| CBS/transport-associated domain-containing protein
[Rhodopseudomonas palustris CGA009]
gi|192293086|ref|YP_001993691.1| signal transduction protein with CBS domains [Rhodopseudomonas
palustris TIE-1]
gi|39651164|emb|CAE29687.1| CBS domain:Transport-associated domain [Rhodopseudomonas palustris
CGA009]
gi|192286835|gb|ACF03216.1| putative signal transduction protein with CBS domains
[Rhodopseudomonas palustris TIE-1]
Length = 243
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 24/141 (17%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
EA + A +++ ++G PV+DDD KL+G++S+ D + RA E+ +
Sbjct: 17 EASIVDAANAMIDNHVSGLPVVDDDGKLIGIISEGDFIR--------RA------EIGTQ 62
Query: 166 WKTFNEVQKLLS---------KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
K ++ LL +G+ VG++MT P + E T++E +L+ + +R
Sbjct: 63 RKRGRWLRMLLGPGTCAGDFVHEHGRKVGEVMTQHPYTISEDTSIETIVKLMEKHHVKRF 122
Query: 217 PVVDADGKLVGIITRGNVVRA 237
PV+ D LVGI+TR N++RA
Sbjct: 123 PVMRGD-LLVGIVTRKNLLRA 142
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
+MT V + ++ DAA +++ LPVVD DGKL+GII+ G+ +R A E
Sbjct: 6 IMTRQLVTIGPEASIVDAANAMIDNHVSGLPVVDDDGKLIGIISEGDFIRRA-------E 58
Query: 247 MGAQ 250
+G Q
Sbjct: 59 IGTQ 62
>gi|315655202|ref|ZP_07908103.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii ATCC
51333]
gi|315490457|gb|EFU80081.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii ATCC
51333]
Length = 511
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 31/151 (20%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
V P T A + E+ + R++G PV+ DD++L+G++++ DL + +
Sbjct: 108 VTDPVTIGPNATIEQLDELCAKYRVSGLPVVTDDYELLGIITNRDLRFVPT--------- 158
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRR 215
+ W T K V D MTP P++ R + E+A +LL E + +
Sbjct: 159 -------AQWGT-------------KTVRDCMTPMPLITGRTGISREEAMKLLAENRIEK 198
Query: 216 LPVVDADGKLVGIITRGNVVRAALQIKHATE 246
LP++D +GKL G+IT + V+ Q HAT+
Sbjct: 199 LPLIDENGKLTGLITVKDFVKTE-QFPHATK 228
>gi|298346656|ref|YP_003719343.1| IMP dehydrogenase [Mobiluncus curtisii ATCC 43063]
gi|315656882|ref|ZP_07909769.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298236717|gb|ADI67849.1| IMP dehydrogenase [Mobiluncus curtisii ATCC 43063]
gi|315492837|gb|EFU82441.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 511
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 31/151 (20%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
V P T A + E+ + R++G PV+ DD++L+G++++ DL + +
Sbjct: 108 VTDPVTIGPNATIEQLDELCAKYRVSGLPVVTDDYELLGIITNRDLRFVPT--------- 158
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRR 215
+ W T K V D MTP P++ R + E+A +LL E + +
Sbjct: 159 -------AQWGT-------------KTVRDCMTPMPLITGRTGISREEAMKLLAENRIEK 198
Query: 216 LPVVDADGKLVGIITRGNVVRAALQIKHATE 246
LP++D +GKL G+IT + V+ Q HAT+
Sbjct: 199 LPLIDENGKLTGLITVKDFVKTE-QFPHATK 228
>gi|89889989|ref|ZP_01201500.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Flavobacteria bacterium BBFL7]
gi|89518262|gb|EAS20918.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Flavobacteria bacterium BBFL7]
Length = 155
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 31/169 (18%)
Query: 74 NSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKL 133
+ + S+ + V DFMT K L P + + T +E L+++RITG PV+++ +L
Sbjct: 12 SQVSNSNQAFQVKDFMTRK--LVTFNP-----DQGITTVMETLLKQRITGGPVVNERKEL 64
Query: 134 VGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 193
VG++SD DL+ + G R N P D + V D M+
Sbjct: 65 VGIISDTDLM---HVIGDSRYHN--MPVGD------------------RKVSDYMSKQVD 101
Query: 194 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
+ ++ +AA L+T +RR PV + +GKL+G I+R +V+ AA Q+K
Sbjct: 102 TIDAEADIFEAATRFLKTGHRRFPVTE-NGKLIGQISRMDVIIAATQLK 149
>gi|295136416|ref|YP_003587092.1| Inosine monophosphate dehydrogenase-related protein [Zunongwangia
profunda SM-A87]
gi|294984431|gb|ADF54896.1| Inosine monophosphate dehydrogenase-related protein [Zunongwangia
profunda SM-A87]
Length = 155
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 34/176 (19%)
Query: 70 TLTANSAAP---SSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPV 126
+ AAP S V D+MT+ T + +V +E L++ +I+G PV
Sbjct: 5 SFQGRRAAPVKIESAPIMVEDYMTSS-------LITFKRDQYVAEVMEALLKNKISGAPV 57
Query: 127 IDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGD 186
++D ++LVG++SD D + K +E + + +
Sbjct: 58 VNDRYELVGIISDADCM-----------------------KQISESRYFNMPIGDMKIEN 94
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
M+ V+ + ++ D A+L YRR PVV+ +GKL+G+I+R +++ AAL+++
Sbjct: 95 YMSTDVAVIHKNLSIFDCAQLFYNNSYRRFPVVE-NGKLIGMISRKDILCAALKLR 149
>gi|209885943|ref|YP_002289800.1| transporter [Oligotropha carboxidovorans OM5]
gi|337740480|ref|YP_004632208.1| CBS domain-containing protein [Oligotropha carboxidovorans OM5]
gi|386029497|ref|YP_005950272.1| hypothetical protein OCA4_c12510 [Oligotropha carboxidovorans OM4]
gi|209874139|gb|ACI93935.1| CBS:transport associated [Oligotropha carboxidovorans OM5]
gi|336094565|gb|AEI02391.1| CBS domain protein [Oligotropha carboxidovorans OM4]
gi|336098144|gb|AEI05967.1| CBS domain protein [Oligotropha carboxidovorans OM5]
Length = 242
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P + ++ + A ++++ I+G PV+D KLVG++S+ D + I +
Sbjct: 10 NPVSVTEDTTLREAALLMLQNHISGLPVVDKFGKLVGVISEGDFVRRVEIGTQTKR---- 65
Query: 159 FPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 214
+ W F G+ VG +M P PV + E TNLED RL+ + +
Sbjct: 66 -----ARWLAFFIGPGRAATEFVHERGRKVGVVMNPQPVTITEDTNLEDIVRLMEKHNIK 120
Query: 215 RLPVVDADGKLVGIITRGNVVR 236
RLPVV D +L+G++TR +++R
Sbjct: 121 RLPVV-KDMQLLGMVTRTDLLR 141
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+MT PV V E T L +AA L+L+ LPVVD GKLVG+I+ G+ VR
Sbjct: 6 IMTRNPVSVTEDTTLREAALLMLQNHISGLPVVDKFGKLVGVISEGDFVR 55
>gi|304389635|ref|ZP_07371597.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304327188|gb|EFL94424.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 511
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 31/151 (20%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
V P T A + E+ + R++G PV+ DD++L+G++++ DL + +
Sbjct: 108 VTDPVTIGPNATIEQLDELCAKYRVSGLPVVTDDYELLGIITNRDLRFVPT--------- 158
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRR 215
+ W T K V D MTP P++ R + E+A +LL E + +
Sbjct: 159 -------AQWGT-------------KTVRDCMTPMPLITGRTGISREEAMKLLAENRIEK 198
Query: 216 LPVVDADGKLVGIITRGNVVRAALQIKHATE 246
LP++D +GKL G+IT + V+ Q HAT+
Sbjct: 199 LPLIDENGKLTGLITVKDFVKTE-QFPHATK 228
>gi|451948868|ref|YP_007469463.1| CBS-domain-containing membrane protein [Desulfocapsa sulfexigens
DSM 10523]
gi|451908216|gb|AGF79810.1| CBS-domain-containing membrane protein [Desulfocapsa sulfexigens
DSM 10523]
Length = 203
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 9/125 (7%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 175
+ + I+G PV+DD+ K+VG+VS+ D L G S V + V
Sbjct: 86 MADASISGVPVMDDNKKVVGIVSEQDFL-----KGLNNGCKSFMAVVARCLQGLGGVDFS 140
Query: 176 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK-LVGIITRGNV 234
+S M GD+MT PV ++E T L + ++ + K RLPV+D + K +VGI++R ++
Sbjct: 141 ISMG---MAGDIMTRPPVTIKENTPLVEITEIMSKNKINRLPVLDQEEKVVVGIVSRDDL 197
Query: 235 VRAAL 239
VRA L
Sbjct: 198 VRAQL 202
>gi|11498858|ref|NP_070087.1| inosine monophosphate dehydrogenase [Archaeoglobus fulgidus DSM
4304]
gi|2649320|gb|AAB89984.1| inosine monophosphate dehydrogenase, putative [Archaeoglobus
fulgidus DSM 4304]
Length = 259
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 40/156 (25%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MT + ++ +KP TV +A +E++ + FPV+DD+ ++VG +S DLL
Sbjct: 5 VKDYMT--KNVYTLKPDNTVKDA-----IELVRKTGHDSFPVVDDNMRVVGYISAVDLL- 56
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
D S PE + D+M+ V R+ +L DA
Sbjct: 57 ----------DKS--PET--------------------KIRDIMSRELYVARDFMDLRDA 84
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
AR++ T + +LPVVD D +LVGII+ +V+R+ ++
Sbjct: 85 ARVMFRTGHSKLPVVDEDNRLVGIISNADVIRSQIE 120
>gi|407690602|ref|YP_006814186.1| putative signal transduction protein [Sinorhizobium meliloti Rm41]
gi|407321777|emb|CCM70379.1| putative signal transduction protein [Sinorhizobium meliloti Rm41]
Length = 223
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 20/161 (12%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
V D MTTK VVK P +V +A +++ + ++G PV+DDD +L+G++S+ DL
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQA-----AKLMFDHHVSGVPVVDDDGRLLGVISEGDL 53
Query: 143 LALDSI-SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
+ + SG+ +M + D F + + + + VGD+MT PV + E L
Sbjct: 54 IRRTELCSGASVLMANMAIDPDDRANAF------IRRCSWR-VGDVMTANPVTIEEEAPL 106
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
A L+ E +R+PV+ DG+LVGI++R ++++A K
Sbjct: 107 ARVAGLMQERGIKRIPVM-RDGELVGIVSRADLLQAIFSTK 146
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V D+MT V + ++ AA+L+ + +PVVD DG+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIR 55
>gi|303325679|ref|ZP_07356122.1| CBS domain protein/ACT domain protein [Desulfovibrio sp. 3_1_syn3]
gi|345892287|ref|ZP_08843110.1| hypothetical protein HMPREF1022_01770 [Desulfovibrio sp.
6_1_46AFAA]
gi|302863595|gb|EFL86526.1| CBS domain protein/ACT domain protein [Desulfovibrio sp. 3_1_syn3]
gi|345047426|gb|EGW51291.1| hypothetical protein HMPREF1022_01770 [Desulfovibrio sp.
6_1_46AFAA]
Length = 222
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 24/166 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V ++MTT E+ V P T++ + +++ + + PV+DD +VG++SD D+
Sbjct: 3 VQNWMTT--EVITVTPETSLLKIG-----KLMRDNSVRRLPVLDDKGHVVGIISDRDV-- 53
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
D S P +T + E+ LL++ K D+MTP P V+ T +E A
Sbjct: 54 ---------RDAS--PSKATTLDMY-EMHYLLAELKAK---DIMTPRPFTVKPTDTVEKA 98
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
A L+L+ K+ LPVV+ G+LVGII+ +V +A + I E G Q
Sbjct: 99 AMLMLDNKFGGLPVVEESGRLVGIISDQDVFKALVSITGVREGGIQ 144
>gi|302867905|ref|YP_003836542.1| CBS domain-containing protein [Micromonospora aurantiaca ATCC
27029]
gi|315505690|ref|YP_004084577.1| cbs domain containing membrane protein [Micromonospora sp. L5]
gi|302570764|gb|ADL46966.1| CBS domain containing protein [Micromonospora aurantiaca ATCC
27029]
gi|315412309|gb|ADU10426.1| CBS domain containing membrane protein [Micromonospora sp. L5]
Length = 232
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 102 TTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 161
T +E +++LV +RI+G PV+D +++G++S+ DLL + SG D E
Sbjct: 16 TVTEETPYREVVDVLVRQRISGVPVVDSFRRVLGVISEADLLH--KVERSGHPDERRVFE 73
Query: 162 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 221
+ L+++ DLMT V E +L ARL+ +RLPV+D
Sbjct: 74 GRRRRTAREKAGALVAR-------DLMTAPAVTTHERASLAATARLMDHEAVKRLPVLDD 126
Query: 222 DGKLVGIITRGNVVRAALQ 240
G+L GI+TRG+++R L+
Sbjct: 127 LGRLAGIVTRGDLLRVHLR 145
>gi|86140967|ref|ZP_01059526.1| Inosine monophosphate dehydrogenase-related protein
[Leeuwenhoekiella blandensis MED217]
gi|85832909|gb|EAQ51358.1| Inosine monophosphate dehydrogenase-related protein
[Leeuwenhoekiella blandensis MED217]
Length = 153
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 31/161 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MTTK T T D++ V ++ L++ RI+G PV++++++L+G++S+ D
Sbjct: 22 VSDYMTTK------LITFTPDQS-VMDVMQKLIKHRISGAPVVNENYELLGVISEGD--C 72
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ IS S R N P ++T VG M + N+ DA
Sbjct: 73 IKHISDS-RYHN--LPMDNAT------------------VGQNMAIDVETIDGNMNVFDA 111
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
AR +E K+RR P+V+ +GKLVG I++ +V++AAL+++ T
Sbjct: 112 ARFFIERKHRRFPIVE-NGKLVGQISQMDVIKAALKLRGNT 151
>gi|408534336|emb|CCK32510.1| hypothetical protein BN159_8132 [Streptomyces davawensis JCM 4913]
Length = 243
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA--DNSMFPEVDSTWKTFNEV 172
+L E RI+G PV+D D +++G++S+ DLL + + S F + +T
Sbjct: 29 LLGEHRISGLPVVDQDEQVIGVISETDLLVRQAETPDPYEPRKRSWFAGLTRQGRTRT-- 86
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
+K + G LMT PV V + +AAR + + + RLPV+D + +LVGI+TR
Sbjct: 87 ----AKARARTAGGLMTEPPVTVHADDTIVEAARTMAQHRVERLPVLDEENRLVGIVTRR 142
Query: 233 NVVRAALQ 240
++++ L+
Sbjct: 143 DLLKVFLR 150
>gi|258405823|ref|YP_003198565.1| hypothetical protein Dret_1703 [Desulfohalobium retbaense DSM 5692]
gi|257798050|gb|ACV68987.1| CBS domain containing membrane protein [Desulfohalobium retbaense
DSM 5692]
Length = 148
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 22/162 (13%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MTT + V+ T + EA + L+E I G PV+DD+ +LVG++ DL+
Sbjct: 3 TVADIMTTN--VITVQKDTPIGEA-----AKKLLENHINGVPVVDDEGRLVGILCQSDLI 55
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRE 197
+ N P V + F +++K + K V MTP P+ V
Sbjct: 56 T--------QQKNFPLPTVFTILDGFIPLSSMGQMEKQVQKIAATTVEQAMTPDPITVTA 107
Query: 198 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
T+L AA L+++ + LPVVD + LVG++ + +V++ L
Sbjct: 108 DTDLNQAASLMVDKNFHTLPVVDGE-TLVGVLGKEDVLKTLL 148
>gi|167584761|ref|ZP_02377149.1| hypothetical protein BuboB_05471 [Burkholderia ubonensis Bu]
Length = 230
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 14/135 (10%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF-- 169
A + V+ I+G PV+D ++VG+VS DLL RA+N W F
Sbjct: 23 AARLFVDHHISGMPVVDATGQVVGIVSQGDLLH--------RAENGTGHGKRPWWLEFLL 74
Query: 170 ---NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 226
E K +G++VGD+M+ + + E L+ A L+ +R+PV+ +GKLV
Sbjct: 75 SSPREQAARYVKEHGRLVGDVMSNQVISISEDMPLDQIADLMERRHLKRVPVL-TEGKLV 133
Query: 227 GIITRGNVVRAALQI 241
GI++R N++RA I
Sbjct: 134 GIVSRSNLIRALASI 148
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
D+MTP+ V + DAARL ++ +PVVDA G++VGI+++G+++ A
Sbjct: 5 DIMTPSVVTATPDMTIHDAARLFVDHHISGMPVVDATGQVVGIVSQGDLLHRA 57
>gi|374984110|ref|YP_004959605.1| putative CBS domain-containing protein [Streptomyces
bingchenggensis BCW-1]
gi|297154762|gb|ADI04474.1| putative CBS domain protein [Streptomyces bingchenggensis BCW-1]
Length = 223
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 120 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL--LS 177
R++ PV++ + ++VG+VS+ DLL + DS F ++++L L+
Sbjct: 36 RVSAMPVLEGEGRVVGVVSEADLLPKEEFR-------------DSDPDRFEQLRRLPDLA 82
Query: 178 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
K +LM+ V V L +AAR++ + +RLPVVD++GKL GI++RG++++
Sbjct: 83 KAGAVAAEELMSAPAVTVHAEATLAEAARIMAVRQVKRLPVVDSEGKLQGIVSRGDLLKV 142
Query: 238 ALQ 240
L+
Sbjct: 143 FLR 145
>gi|433616661|ref|YP_007193456.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Sinorhizobium meliloti GR4]
gi|429554908|gb|AGA09857.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Sinorhizobium meliloti GR4]
Length = 223
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 20/161 (12%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
V D MTTK VVK P +V +A +++ + ++G PV+DDD +L+G++S+ DL
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQA-----AKLMFDHHVSGVPVVDDDGRLLGVISEGDL 53
Query: 143 LALDSI-SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
+ + SG+ M + D F + + + + VGD+MT PV + E L
Sbjct: 54 IRRTELCSGASVLMAEMAIDPDDRANAF------IRRCSWR-VGDVMTANPVTIEEEAPL 106
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
A L+ E +R+PV+ DG+LVGI++R ++++A K
Sbjct: 107 ARVAGLMQERGIKRIPVM-RDGELVGIVSRADLLQAIFSTK 146
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V D+MT V + ++ AA+L+ + +PVVD DG+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIR 55
>gi|152993377|ref|YP_001359098.1| inosine 5'-monophosphate dehydrogenase [Sulfurovum sp. NBC37-1]
gi|151425238|dbj|BAF72741.1| inosine-5'-monophosphate dehydrogenase [Sulfurovum sp. NBC37-1]
Length = 481
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 33/135 (24%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
++ P +A V A ++ E RI+G PV+D D KL+G++++ D+ +
Sbjct: 93 IIDPIYISPDATVGEADALMGEYRISGVPVVDADKKLIGIITNRDMRFI----------- 141
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRR 215
D + K V D MTPAP+V ++ T LE+AA++L + K +
Sbjct: 142 -----TDMSLK----------------VADTMTPAPLVTAKKGTTLEEAAKVLQKHKIEK 180
Query: 216 LPVVDADGKLVGIIT 230
LP+VD DGKL G+IT
Sbjct: 181 LPIVDDDGKLNGLIT 195
>gi|298345503|ref|YP_003718190.1| putative acetoin dehydrogenase AcuB [Mobiluncus curtisii ATCC
43063]
gi|298235564|gb|ADI66696.1| possible acetoin dehydrogenase AcuB [Mobiluncus curtisii ATCC
43063]
Length = 206
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 76/152 (50%), Gaps = 19/152 (12%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P T A VP A+E++ IT PV+ D KL G+VS DL N
Sbjct: 4 NPFTIDSGATVPDAIELMQTHGITKLPVLRD-GKLCGVVSQLDL-------------NRA 49
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
P D+T +F EV LLSK + +M P + LE+AA L+ +TK LPV
Sbjct: 50 LPS-DATSLSFGEVAYLLSKLK---IYKIMRKNPPTIAPDAMLEEAAILMRDTKVEILPV 105
Query: 219 VDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+D +GK+VG+IT +V+ A + I A E G +
Sbjct: 106 LD-EGKVVGVITESDVLDAFIDINGAREPGTR 136
>gi|403739465|ref|ZP_10951846.1| hypothetical protein AUCHE_16_00320 [Austwickia chelonae NBRC
105200]
gi|403190668|dbj|GAB78616.1| hypothetical protein AUCHE_16_00320 [Austwickia chelonae NBRC
105200]
Length = 201
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
EA + AL++L E+RIT PV+ D K+VG++S+ D+L ++ RA + E
Sbjct: 17 EADLNEALQLLAERRITAVPVVGSDNKVVGVLSEIDILRR-AVEPDARAHATPLAE---- 71
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
S+ K VG++MT P E ++ D L T ++ LPVV DG L
Sbjct: 72 -----------SEPLPKTVGEIMTADPRTTTEGADVSDLIDLFTHTSFKSLPVV-RDGDL 119
Query: 226 VGIITRGNVVRA 237
VG+++R +VVRA
Sbjct: 120 VGVVSRSDVVRA 131
>gi|452209080|ref|YP_007489194.1| CBS domain protein [Methanosarcina mazei Tuc01]
gi|452098982|gb|AGF95922.1| CBS domain protein [Methanosarcina mazei Tuc01]
Length = 154
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 11/143 (7%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD-NS 157
KP TV EA +IL E I+G PV++D KLVG+VS+ DLL L I G S
Sbjct: 15 KPENTVREAA-----KILKENNISGAPVLEDG-KLVGIVSEADLLELLVIPEKGNLWLPS 68
Query: 158 MFPEVDSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 214
F ++ + ++ E +K+LS + ++MT + + ++E+A+ L++ +
Sbjct: 69 PFEIIEVPIRELLSWEETKKMLSDVGSTKLEEMMTKSVHTISSEASVEEASELMVRHRIN 128
Query: 215 RLPVVDADGKLVGIITRGNVVRA 237
RLPV++ +G +VGI+TRG+++
Sbjct: 129 RLPVIE-NGYVVGIVTRGDIIEG 150
>gi|405377370|ref|ZP_11031313.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
gi|397326183|gb|EJJ30505.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
Length = 223
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 20/161 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MTTK + + P +V A +++ ++ ++G PV+DD+ +L+G++S+ DL+
Sbjct: 3 VKDVMTTK--VVGLSPDHSVRHA-----AKLMSDQHVSGVPVVDDEGRLLGVISEGDLIR 55
Query: 145 LDSISGSG---RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
+S +AD + +E K G VGD+MTP PV + E L
Sbjct: 56 RTELSSGAFVLKADMGV---------GADERANAFVKRCGWRVGDVMTPDPVTIDEDAPL 106
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
A L+ + +R+PV+ DGKLVGI++R ++++ K
Sbjct: 107 SRVASLMQDHGIKRIPVL-RDGKLVGIVSRADLLQVIYSAK 146
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 35/54 (64%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V D+MT V + ++ AA+L+ + +PVVD +G+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVGLSPDHSVRHAAKLMSDQHVSGVPVVDDEGRLLGVISEGDLIR 55
>gi|27379757|ref|NP_771286.1| hypothetical protein blr4646 [Bradyrhizobium japonicum USDA 110]
gi|27352910|dbj|BAC49911.1| blr4646 [Bradyrhizobium japonicum USDA 110]
Length = 228
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 14/145 (9%)
Query: 97 VVKPTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 155
+V P TV A V +IL+E+RI+ PV+D D K++G+VS+ DLL + SG+ R+
Sbjct: 7 MVSPVVTVGPNATVRQVAQILLERRISAVPVVDADNKVLGIVSEGDLLH-RAESGTERSP 65
Query: 156 NSMFPEVDSTWKTFNEVQKLLS----KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
S W L+ K++ V D+MT T L + A LL E
Sbjct: 66 --------SWWLRLLTGDAQLATDYVKSHSIKVQDVMTQEVATAAPETPLHEIAMLLEER 117
Query: 212 KYRRLPVVDADGKLVGIITRGNVVR 236
+ +R+P+V+ +G+LVGI++R N+++
Sbjct: 118 QIKRVPIVNKEGQLVGIVSRANLLQ 142
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
D+M V V + A++LLE + +PVVDAD K++GI++ G+++ A
Sbjct: 5 DVMVSPVVTVGPNATVRQVAQILLERRISAVPVVDADNKVLGIVSEGDLLHRA 57
>gi|255690566|ref|ZP_05414241.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii DSM
17565]
gi|423301600|ref|ZP_17279623.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii
CL09T03C10]
gi|260624027|gb|EEX46898.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii DSM
17565]
gi|408471593|gb|EKJ90124.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii
CL09T03C10]
Length = 492
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 34/147 (23%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL+I+ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLE 210
R + M +D +MTP V ++T+LE AA++L +
Sbjct: 144 RFERDMTKHIDL----------------------VMTPKEKLVTTNQSTDLESAAQILQK 181
Query: 211 TKYRRLPVVDADGKLVGIITRGNVVRA 237
K +LP+V DGKL+G++T ++ +A
Sbjct: 182 HKIEKLPIVGMDGKLIGLVTYKDITKA 208
>gi|406927826|gb|EKD63787.1| cbs protein [uncultured bacterium]
Length = 149
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
T MT + +H V PT A V T ++ + + +T PV+D KL+G+V++ D+
Sbjct: 3 TAKQIMT--KSIHSVNPT-----AAVKTIIQKMAKAGVTAIPVVDKKNKLLGIVTEADVA 55
Query: 144 ALDSISGSGRADNSM--FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
+ + RA + + +++T K E++K ++T DLMT + + E L
Sbjct: 56 THELNPHTPRAISLLGGLIYLENTEKYNEELKKFCAQT----ASDLMTKEVITINENATL 111
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
++ ++ E + RLPV+D G L GI+TR ++++A
Sbjct: 112 DEIIAIMQEKQVGRLPVIDEKGILKGIVTRTDIIKA 147
>gi|424887384|ref|ZP_18310989.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393175156|gb|EJC75199.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 225
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 85/150 (56%), Gaps = 15/150 (10%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MTTK + + P +V A ++++ R++G PV+DD ++ G+V++ DLL
Sbjct: 5 DIMTTK--VVSISPAVSVRHAVA-----MMLQNRVSGLPVVDDQGRVCGMVTEGDLLLRR 57
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
+ + R + PE+ S ++++ + +NG V D+M+ +V R + + D A
Sbjct: 58 EVRLTPRPARA--PELISEI----DLERYIC-SNGWCVTDVMSQDVIVARPDSEVSDIAE 110
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVR 236
L + +RLP+V+ DG+LVGI++R +++R
Sbjct: 111 SLQAHRIKRLPIVE-DGRLVGIVSRRDILR 139
>gi|307565742|ref|ZP_07628211.1| inosine-5'-monophosphate dehydrogenase [Prevotella amnii CRIS
21A-A]
gi|307345568|gb|EFN90936.1| inosine-5'-monophosphate dehydrogenase [Prevotella amnii CRIS
21A-A]
Length = 494
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 31/141 (21%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
+ P T + V AL I+ E I G PV+DDD LVG+V++ DL R +
Sbjct: 99 IYDPVTIRRGSTVQEALSIMAEYHIGGIPVVDDDNHLVGIVTNRDL----------RFER 148
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
+ +D + N V + TNL +AA +L E K +L
Sbjct: 149 CLDKSIDQVMTSEN---------------------LVTTHQKTNLSEAAEILQENKIEKL 187
Query: 217 PVVDADGKLVGIITRGNVVRA 237
PVVD D L+G+IT ++ +A
Sbjct: 188 PVVDKDNHLIGLITYKDITKA 208
>gi|322420873|ref|YP_004200096.1| hypothetical protein GM18_3385 [Geobacter sp. M18]
gi|320127260|gb|ADW14820.1| CBS domain containing protein [Geobacter sp. M18]
Length = 217
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 18/153 (11%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
+ P T + + V AL ++ EK+I PV+D KLVG+VSD DLL S + A
Sbjct: 9 LNPITIIPDISVTEALRLMGEKKIRRLPVVDRSGKLVGIVSDRDLLKASPSSATSLA--- 65
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
W E+ LL+K V M + V E T LE+AAR++++ + LP
Sbjct: 66 -------IW----EIHDLLAKLT---VEKCMAKEVITVPEDTPLEEAARIMVDRRIGGLP 111
Query: 218 VVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
V++ + KLVGIIT ++ + L++ G +
Sbjct: 112 VMNGE-KLVGIITESDLFKTLLELLGGRRQGVR 143
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+V D MT P+ + ++ +A RL+ E K RRLPVVD GKLVGI++ ++++A+
Sbjct: 2 LVRDRMTLNPITIIPDISVTEALRLMGEKKIRRLPVVDRSGKLVGIVSDRDLLKAS 57
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 75 SAAPSSGVYTVGDFMT--TKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWK 132
S+A S ++ + D + T E+ + T ++ + A I+V++RI G PV++ + K
Sbjct: 59 SSATSLAIWEIHDLLAKLTVEKCMAKEVITVPEDTPLEEAARIMVDRRIGGLPVMNGE-K 117
Query: 133 LVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 185
LVG++++ DL L + G R + T +V K + + G +VG
Sbjct: 118 LVGIITESDLFKTLLELLGGRRQGVRITVSTTGAKGTLADVTKTIYEAGGNIVG 171
>gi|150398194|ref|YP_001328661.1| signal-transduction protein [Sinorhizobium medicae WSM419]
gi|150029709|gb|ABR61826.1| putative signal-transduction protein with CBS domains
[Sinorhizobium medicae WSM419]
Length = 223
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 18/160 (11%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
V D MTTK VVK P +V +A +++ + ++G PV++DD +L+G++S+ DL
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQA-----AKLMFDYHVSGVPVVNDDGRLLGVISEGDL 53
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
+ + + D T N + + + + VGD+MT PV + E L
Sbjct: 54 IRRTEL-----CSGASVLMADMTIDPVNRANAFIRRCSWR-VGDVMTADPVTIEEEAPLA 107
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
A L+ E +R+PV+ DG+LVGI++R ++++A K
Sbjct: 108 RVAGLMQERGIKRIPVM-RDGELVGIVSRADLLQAIFSTK 146
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 35/54 (64%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V D+MT V + ++ AA+L+ + +PVV+ DG+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVKLSPDNSVRQAAKLMFDYHVSGVPVVNDDGRLLGVISEGDLIR 55
>gi|239616754|ref|YP_002940076.1| CBS domain containing membrane protein [Kosmotoga olearia TBF
19.5.1]
gi|239505585|gb|ACR79072.1| CBS domain containing membrane protein [Kosmotoga olearia TBF
19.5.1]
Length = 150
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 10/135 (7%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
E F+ T L K TG PV+D+++++VG +S+ D+ I S + +
Sbjct: 21 EDFIITCLR----KMRTGLPVVDEEFRVVGFISESDV-----IKSSLPSYFELLQSASFI 71
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
T V++L N + +++PA + V+ L +AA LL++ + LPVVD D KL
Sbjct: 72 PDTHQFVRRLGDIRNDPIASHMVSPA-IAVKPDDTLINAADLLIKKGLKTLPVVDDDHKL 130
Query: 226 VGIITRGNVVRAALQ 240
VGIITR N++ +ALQ
Sbjct: 131 VGIITRLNLIYSALQ 145
>gi|385209203|ref|ZP_10036071.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
gi|385181541|gb|EIF30817.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
Length = 229
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 11/140 (7%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P TV E I V+ I+G PV+D L G++S+ DLL I R +S
Sbjct: 14 VTPDMTVREV-----ARIFVDNGISGAPVLDPQGHLAGMISEGDLLRRTEIGTDERKPSS 68
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
W +E + + KT+ V D+MTP V V+ T L + A +L + +R+P
Sbjct: 69 WL----DVWSASHEARDYI-KTHAVKVRDVMTPDVVTVQPDTPLGEVASILETRRIKRVP 123
Query: 218 VVDADGKLVGIITRGNVVRA 237
V A G++VGI++R N+V+A
Sbjct: 124 VTQA-GRVVGIVSRANLVQA 142
>gi|333911316|ref|YP_004485049.1| signal transduction protein with CBS domains [Methanotorris igneus
Kol 5]
gi|333751905|gb|AEF96984.1| putative signal transduction protein with CBS domains
[Methanotorris igneus Kol 5]
Length = 153
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
KP T + + + + E +I+G PV++D KLVG++S+ D++ +I+ + +
Sbjct: 10 KPITVNPDDDIRDVIRLFREHKISGAPVVED-GKLVGIISESDIVK--TITTHNESIGLI 66
Query: 159 FPE----VDSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
P ++ KT E ++ + K V D+MT + + + DAA+L++E
Sbjct: 67 LPSPLDLIELPLKTTLKIEEFKEDIKKALKTKVKDVMTKDVITISPDETINDAAKLMIEN 126
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRA 237
+RLPVV+ +GKLVGI+TRG+++ A
Sbjct: 127 NIKRLPVVE-NGKLVGIVTRGDLIEA 151
>gi|92117441|ref|YP_577170.1| hypothetical protein Nham_1902 [Nitrobacter hamburgensis X14]
gi|91800335|gb|ABE62710.1| CBS domain containing membrane protein [Nitrobacter hamburgensis
X14]
Length = 231
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 14/156 (8%)
Query: 97 VVKPTTTVDE-AFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 155
+V P TV + A V +IL+EKRI+ PV+D+ K++G+V++ DL+ + +G+ R
Sbjct: 7 MVSPVITVGKIATVRDVAKILLEKRISAVPVVDNVGKVIGIVTESDLMH-RAEAGTERPY 65
Query: 156 NSMFPEVDSTWKTFNEVQKLLS----KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
S W F ++ K++ + D+MT V T L + A L E
Sbjct: 66 --------SWWVHFLAGDATMAADYVKSHATRIEDVMTTDVVTATPETLLHEIAMLFEER 117
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEM 247
+ +R+P+V+ DG LVGI++R N+++A + EM
Sbjct: 118 QIKRVPIVNNDGDLVGIVSRANLIQAVASARPKLEM 153
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
D+M + V + + D A++LLE + +PVVD GK++GI+T +++ A
Sbjct: 5 DVMVSPVITVGKIATVRDVAKILLEKRISAVPVVDNVGKVIGIVTESDLMHRA 57
>gi|21226577|ref|NP_632499.1| inosine-5'-monophosphate dehydrogenase [Methanosarcina mazei Go1]
gi|20904852|gb|AAM30171.1| putative inosine-5'-monophosphate dehydrogenase [Methanosarcina
mazei Go1]
Length = 169
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 11/143 (7%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD-NS 157
KP TV EA +IL E I+G PV++D KLVG+VS+ DLL L I G S
Sbjct: 30 KPENTVREAA-----KILKENNISGAPVLEDG-KLVGIVSEADLLELLVIPEKGNLWLPS 83
Query: 158 MFPEVDSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 214
F ++ + ++ E +K+LS + ++MT + + ++E+A+ L++ +
Sbjct: 84 PFEIIEVPIRELLSWEETKKMLSDVGSTKLEEMMTKSVHTISSEASVEEASELMVRHRIN 143
Query: 215 RLPVVDADGKLVGIITRGNVVRA 237
RLPV++ +G +VGI+TRG+++
Sbjct: 144 RLPVIE-NGYVVGIVTRGDIIEG 165
>gi|294101984|ref|YP_003553842.1| putative signal transduction protein with CBS domains
[Aminobacterium colombiense DSM 12261]
gi|293616964|gb|ADE57118.1| putative signal transduction protein with CBS domains
[Aminobacterium colombiense DSM 12261]
Length = 152
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 18/137 (13%)
Query: 101 TTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA------LDSISGSGRA 154
T ++E + A+ IL ++G PV+ +DW+LVG +S+ D+L L+ ++ S
Sbjct: 14 TAVMEEDLIQDAVHILYSHNLSGIPVVKEDWELVGYLSETDILQAAIPTYLEILAQSSFL 73
Query: 155 DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 214
+N VD F + K K+V + MT P V + +L A L+L K +
Sbjct: 74 NNGEIHLVDR----FKNLGK-------KVVREFMTKNPYSVPPSASLMTVADLMLRKKIK 122
Query: 215 RLPVVDADGKLVGIITR 231
RLPVV+ + KL+GII R
Sbjct: 123 RLPVVEGN-KLIGIINR 138
>gi|386401293|ref|ZP_10086071.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
gi|385741919|gb|EIG62115.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
Length = 242
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 11/140 (7%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P T++ EA I++++ ++G V+DD KLVG+VS+ D + I G+GR
Sbjct: 14 VTPDTSIVEA-----ANIMLKRHVSGLTVVDDAGKLVGVVSEGDFIRRSEI-GTGRKRGR 67
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ + K+ ++ +G+ V ++MT +PV + E T L + L+ +RLP
Sbjct: 68 WLRFILGSGKSASD----FVHEHGRKVSEVMTRSPVTLTEDTALAEIVDLMERNNVKRLP 123
Query: 218 VVDADGKLVGIITRGNVVRA 237
V+ D K+VGI++R N+++A
Sbjct: 124 VIRGD-KIVGIVSRANLLQA 142
>gi|78357089|ref|YP_388538.1| hypothetical protein [Desulfovibrio alaskensis G20]
gi|78219494|gb|ABB38843.1| CBS domain containing membrane protein [Desulfovibrio alaskensis
G20]
Length = 150
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 11/152 (7%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 148
M + +++ P T + + A ++++E + G PV+DD KLVG++ DL+A
Sbjct: 1 MLSAKDIMSADPVTVAPDMDIIEATKLMLEYKFNGLPVVDDAGKLVGVLCQSDLVA---- 56
Query: 149 SGSGRADN--SMFPEVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ N S+F +D K+ +++ + K V D MT P V T L++
Sbjct: 57 --QQKKVNLPSLFTILDGFIPLKSLSDMDSEMRKVAATRVSDAMTDNPATVTPDTPLDEV 114
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
A L++++KY LPVV DG LVG++ + +V+R
Sbjct: 115 ATLMVDSKYYTLPVV-KDGILVGVVGKEDVLR 145
>gi|430760272|ref|YP_007216129.1| CBS domain protein [Thioalkalivibrio nitratireducens DSM 14787]
gi|430009896|gb|AGA32648.1| CBS domain protein [Thioalkalivibrio nitratireducens DSM 14787]
Length = 160
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 94 ELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 153
EL P T E V +++LVE+R+ G PV+D D L+G+V+ DL + ++ +
Sbjct: 5 ELMTPAPVTVPSEMPVDALVDLLVERRVNGVPVVDADGVLLGMVTTGDL--IHRVADARV 62
Query: 154 ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 213
D F F + G ++M+ P V + ++ AARLL+E +
Sbjct: 63 EDRGSFWRESFYKSVFRPNGPEPNPAEGATAAEVMSRNPAFVAPSDDMAVAARLLIEHRV 122
Query: 214 RRLPVVDADGKLVGIITRGNVVRA 237
+ LPV+D +G+LVG+I+R +++R
Sbjct: 123 KSLPVLD-NGRLVGMISRLDLLRC 145
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
V +LMTPAPV V ++ LL+E + +PVVDADG L+G++T G+++
Sbjct: 3 VRELMTPAPVTVPSEMPVDALVDLLVERRVNGVPVVDADGVLLGMVTTGDLI 54
>gi|413962370|ref|ZP_11401598.1| signal-transduction protein [Burkholderia sp. SJ98]
gi|413931242|gb|EKS70529.1| signal-transduction protein [Burkholderia sp. SJ98]
Length = 228
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 70/117 (59%), Gaps = 5/117 (4%)
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
I+G PVID++ L+G+V++ DL+ I G+G + + E+ ++ + E+ K +
Sbjct: 34 ISGMPVIDEEGNLLGIVTEGDLMHRAEI-GTGVKQRAWWLELVASTR---ELASQYVKEH 89
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ V D+MT V ET + D A LL + +R+PV+ DGK+VG+++R N++RA
Sbjct: 90 ARKVSDVMTTDVATVSETCPVADIAELLERKRIKRVPVLR-DGKVVGVVSRANLIRA 145
>gi|317970073|ref|ZP_07971463.1| CBS [Synechococcus sp. CB0205]
Length = 154
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
E + A++++ + I+G PV+D LVG +++ DL+ +S G M +D+
Sbjct: 21 ETPLQNAVQVMSDHHISGLPVVDAAGALVGELTEQDLMVRES--GFDAGPYVML--LDAV 76
Query: 166 WKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 223
N +Q K + + G VG++M+ AP T L +AARLL E +RL V+D
Sbjct: 77 IYLRNPLQWDKQVHQVLGNSVGEVMSQAPHTCSGDTLLPEAARLLHEKGTQRLFVLDEQR 136
Query: 224 KLVGIITRGNVVRA 237
+ VG++TRG+VVRA
Sbjct: 137 RPVGVLTRGDVVRA 150
>gi|295681015|ref|YP_003609589.1| signal transduction protein [Burkholderia sp. CCGE1002]
gi|295440910|gb|ADG20078.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1002]
Length = 230
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 102 TTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 161
T E + A ++ V+ I+G PV+ + +++G+VS DLL +G+G + E
Sbjct: 13 TATPEMTIHDAAKLFVDHHISGMPVLGANGQVIGIVSQGDLLHRVE-NGTGHGKRRWWLE 71
Query: 162 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 221
+ S+ + E K +G +VGD+M + + E L A L+ +R+PV+
Sbjct: 72 LLSS--SAREQAARYVKEHGHVVGDVMCENVISIPEDMPLHQIADLMERRHLKRVPVL-K 128
Query: 222 DGKLVGIITRGNVVRAALQIKHATEMGAQ 250
DG+LVGI++R N++RA ++ + G+
Sbjct: 129 DGQLVGIVSRSNLIRALAAVEPTIDTGSH 157
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 33/51 (64%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MT + + + DAA+L ++ +PV+ A+G+++GI+++G+++
Sbjct: 5 DIMTSSVITATPEMTIHDAAKLFVDHHISGMPVLGANGQVIGIVSQGDLLH 55
>gi|304391059|ref|ZP_07373011.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|304325942|gb|EFL93188.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
Length = 212
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 76/152 (50%), Gaps = 19/152 (12%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P T A VP A+E++ IT PV+ D KL G+VS DL N
Sbjct: 10 NPFTIDSGATVPDAIELMQTHGITKLPVLRD-GKLCGVVSQLDL-------------NRA 55
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
P D+T +F EV LLSK + +M P + LE+AA L+ +TK LPV
Sbjct: 56 LPS-DATSLSFGEVAYLLSKLK---IYKIMRKNPPTIAPDAMLEEAAILMRDTKVEILPV 111
Query: 219 VDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+D +GK+VG+IT +V+ A + I A E G +
Sbjct: 112 LD-EGKVVGVITESDVLDAFIDINGAREPGTR 142
>gi|289774171|ref|ZP_06533549.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|289704370|gb|EFD71799.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 228
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 15/141 (10%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
EA + +L + +++ PV++ + +++GLVS+ DLL + DS
Sbjct: 22 EAPFKDIIALLDQWKVSALPVLEGEGRVIGLVSEADLLPKEEFR-------------DSD 68
Query: 166 WKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 223
F ++++L L+K G D+MT V V L AAR++ + K +RLPVV+A+G
Sbjct: 69 PDRFTQMRRLTDLAKAGGLTAADVMTAPAVTVHPDATLAQAARIMAQRKVKRLPVVNAEG 128
Query: 224 KLVGIITRGNVVRAALQIKHA 244
L G+++R ++++ L+ A
Sbjct: 129 LLEGVVSRADLLKVFLRTADA 149
>gi|222100404|ref|YP_002534972.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
gi|221572794|gb|ACM23606.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
Length = 215
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 25/157 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT P T E AL+++ + +I V+ DD ++VG+V++ DLL
Sbjct: 3 VKDFMTRN-------PITIAPETSFNEALKLMKQNKIKRLIVMKDD-RIVGIVTEKDLLY 54
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ +A + W E+ LLSK V ++MT V V E T +EDA
Sbjct: 55 ----ASPSKATTL------NVW----ELHYLLSKLK---VEEIMTKDVVTVNENTPIEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
AR++ E LPVVD GKLVGIIT+ ++ + ++I
Sbjct: 98 ARIMEERDISGLPVVDDAGKLVGIITQTDIFKVFVEI 134
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+V D MT P+ + T+ +A +L+ + K +RL +V D ++VGI+T +++ A+
Sbjct: 2 LVKDFMTRNPITIAPETSFNEALKLMKQNKIKRL-IVMKDDRIVGIVTEKDLLYAS 56
>gi|21218726|ref|NP_624505.1| hypothetical protein SCO0169 [Streptomyces coelicolor A3(2)]
gi|5748631|emb|CAB53136.1| conserved hypothetical protein SCJ1.18 [Streptomyces coelicolor
A3(2)]
Length = 217
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 15/141 (10%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
EA + +L + +++ PV++ + +++GLVS+ DLL + DS
Sbjct: 11 EAPFKDIIALLDQWKVSALPVLEGEGRVIGLVSEADLLPKEEFR-------------DSD 57
Query: 166 WKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 223
F ++++L L+K G D+MT V V L AAR++ + K +RLPVV+A+G
Sbjct: 58 PDRFTQMRRLTDLAKAGGLTAADVMTAPAVTVHPDATLAQAARIMAQRKVKRLPVVNAEG 117
Query: 224 KLVGIITRGNVVRAALQIKHA 244
L G+++R ++++ L+ A
Sbjct: 118 LLEGVVSRADLLKVFLRTDDA 138
>gi|376296861|ref|YP_005168091.1| hypothetical protein DND132_2083 [Desulfovibrio desulfuricans
ND132]
gi|323459423|gb|EGB15288.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
ND132]
Length = 224
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 17/139 (12%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A +++ +K I+ PV+D+ +++G+VSD D+ D S P +T +E
Sbjct: 23 ASKLMKDKAISRLPVVDESGRIIGIVSDRDI-----------KDAS--PSKATTLDV-HE 68
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+ LLS+ + D+MT V +R+T +E AA L+LE + LPVVD + +VGIIT
Sbjct: 69 LYYLLSEIK---IADIMTKKVVTIRDTETVEKAAVLMLEGNFGGLPVVDENDHVVGIITD 125
Query: 232 GNVVRAALQIKHATEMGAQ 250
++ + ++I E GAQ
Sbjct: 126 TDIFKVLVEISGIYEGGAQ 144
>gi|398353803|ref|YP_006399267.1| hypothetical protein USDA257_c39660 [Sinorhizobium fredii USDA 257]
gi|390129129|gb|AFL52510.1| hypothetical protein USDA257_c39660 [Sinorhizobium fredii USDA 257]
Length = 263
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 17/134 (12%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSISGSGRADNSMFPEV 162
E + A +++E RI+G PV D+ KLVG++S+ DLL L S +G G+ + PE
Sbjct: 58 EHSISHAARMMLENRISGLPVCDNSGKLVGILSEGDLLRRAELGSAAGRGQVSDRPEPEA 117
Query: 163 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 222
K + VGD+MT V V E L A ++ + +R+PVV A
Sbjct: 118 -------------FIKGHSWRVGDVMTRDVVTVDEDVPLGRVAAIMAANEIKRIPVVRA- 163
Query: 223 GKLVGIITRGNVVR 236
G +VGII+R +++R
Sbjct: 164 GAMVGIISRSDILR 177
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
D+M+ + + ++ AAR++LE + LPV D GKLVGI++ G+++R A
Sbjct: 46 DIMSKNVLSLSPEHSISHAARMMLENRISGLPVCDNSGKLVGILSEGDLLRRA 98
>gi|91783939|ref|YP_559145.1| hypothetical protein Bxe_A1873 [Burkholderia xenovorans LB400]
gi|91687893|gb|ABE31093.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 229
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P TV E I V+ I+G PV+D + + G++S+ DLL I R +S
Sbjct: 14 VTPDMTVREV-----ARIFVDNGISGAPVLDPEGHIAGMISEGDLLRRTEIGTDERKPSS 68
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
W +E + + KT+ V D+MTP V V+ T L + A +L + +R+P
Sbjct: 69 WL----DVWSASHEARDYI-KTHAVKVRDVMTPDVVTVQPDTPLGEVASILETRRIKRVP 123
Query: 218 VVDADGKLVGIITRGNVVRA 237
V A G++VGI++R N+V+A
Sbjct: 124 VTQA-GRVVGIVSRANLVQA 142
>gi|308274761|emb|CBX31360.1| hypothetical protein N47_E48720 [uncultured Desulfobacterium sp.]
Length = 170
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 102 TTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 161
T + E V A +IL+E I G PV+D + KL G++ D+++ S+F
Sbjct: 31 TVMPETEVIQAAKILLENHINGVPVVDKNGKLAGILCQSDIIS----QQKKFPVPSLFAF 86
Query: 162 VDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
+D + + ++K + K V M+ PV V+ T++E A L+++ + LPVV
Sbjct: 87 LDGFISIPSMKHIEKEVQKIAAVTVEHAMSVNPVTVKSDTSIEAVAALMVDNNFHTLPVV 146
Query: 220 DADGKLVGIITRGNVVRAAL 239
D DGKL+GI+ + +++R +
Sbjct: 147 D-DGKLIGIVGKEDILRTLI 165
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
+V D+M + V T + AA++LLE +PVVD +GKL GI+ + +++
Sbjct: 20 IVKDIMKTDVITVMPETEVIQAAKILLENHINGVPVVDKNGKLAGILCQSDII 72
>gi|85716122|ref|ZP_01047098.1| hypothetical protein NB311A_11100 [Nitrobacter sp. Nb-311A]
gi|85697121|gb|EAQ35003.1| hypothetical protein NB311A_11100 [Nitrobacter sp. Nb-311A]
Length = 242
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 21/145 (14%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P TTV +A ++ + I+G PV++ + K+VG++S+ D + I R
Sbjct: 14 VHPDTTVVDA-----ANTMLRQHISGLPVVNAEGKMVGIISEGDFIRRAEIGTQRRR--- 65
Query: 158 MFPEVDSTWKTF-----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
+ W F + + + G+ VG++MTP P V E +LED ++ + +
Sbjct: 66 ------ARWLAFLLGAGRDASDFVHE-QGRKVGEIMTPDPYTVSEDASLEDIVTMMEQKR 118
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+RLPV+ D ++VGI+TR N+++A
Sbjct: 119 VKRLPVMRND-QIVGIVTRSNLLQA 142
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
+MT + V T + DAA +L LPVV+A+GK+VGII+ G+ +R A E
Sbjct: 6 IMTRRVITVHPDTTVVDAANTMLRQHISGLPVVNAEGKMVGIISEGDFIRRA-------E 58
Query: 247 MGAQ 250
+G Q
Sbjct: 59 IGTQ 62
>gi|320160660|ref|YP_004173884.1| hypothetical protein ANT_12500 [Anaerolinea thermophila UNI-1]
gi|319994513|dbj|BAJ63284.1| hypothetical protein ANT_12500 [Anaerolinea thermophila UNI-1]
Length = 275
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 26/156 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V ++M+ EE+ VV+P T++ EA ++ KRI PV+++D +LVGLV+ DL++
Sbjct: 143 VAEYMS--EEVVVVEPDTSLLEAH-----RLMGTKRIRALPVLEED-RLVGLVTRTDLVS 194
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
D R Q+L K + V +MT V V T L++A
Sbjct: 195 SDPSRFISRKQ-----------------QELSLKILTQPVEGIMTRTLVTVSPQTTLKEA 237
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
ARLLLE K LPVV+ + KLVGI+T ++ R +Q
Sbjct: 238 ARLLLEKKIHSLPVVE-NSKLVGILTESDLFRMVVQ 272
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 36/152 (23%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
T+ D MT V P T +P A +++E +ITG PV++D +LVG+++ D+
Sbjct: 78 TIRDIMT-------VNPITVFPNTPMPKAARVMLENKITGLPVLNDQRELVGILTSSDIF 130
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
E+++ L +V + M+ VVV T+L +
Sbjct: 131 RF----------------------IIEELEEPL------VVAEYMSEEVVVVEPDTSLLE 162
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
A RL+ + R LPV++ D +LVG++TR ++V
Sbjct: 163 AHRLMGTKRIRALPVLEED-RLVGLVTRTDLV 193
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 21/140 (15%)
Query: 102 TTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 161
T E F+ A +L ++I PV+ KLVG+V+ LL RAD P
Sbjct: 16 TVTPETFIVDARRLLDVRKIRHLPVVSAG-KLVGIVTRRGLL---------RAD---LPA 62
Query: 162 V-DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 220
V D TW+ ++ + + + D+MT P+ V T + AAR++LE K LPV++
Sbjct: 63 VSDETWEIAFDL-------HHQTIRDIMTVNPITVFPNTPMPKAARVMLENKITGLPVLN 115
Query: 221 ADGKLVGIITRGNVVRAALQ 240
+LVGI+T ++ R ++
Sbjct: 116 DQRELVGILTSSDIFRFIIE 135
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
+V + M+ V T + DA RLL K R LPVV A GKLVGI+TR ++RA L
Sbjct: 5 IVKNWMSSPVYTVTPETFIVDARRLLDVRKIRHLPVVSA-GKLVGIVTRRGLLRADL 60
>gi|336172298|ref|YP_004579436.1| hypothetical protein [Lacinutrix sp. 5H-3-7-4]
gi|334726870|gb|AEH01008.1| CBS domain containing membrane protein [Lacinutrix sp. 5H-3-7-4]
Length = 157
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 31/163 (19%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
+ V DFM+ EL K T +V+E + L++ +I+G PV+++ +L+G++S+ D
Sbjct: 24 FKVSDFMS--RELITFKATQSVEEV-----VSALIKHKISGGPVVNERNELIGIISEGD- 75
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
+ IS S + M E DS K MV ++ T + N+
Sbjct: 76 -CIKQISDSRYYNMPM--ENDSIEK--------------HMVTNVET-----IDGNLNVF 113
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
DAA+ L++K RR P+V+ DGKLVG I++ ++++AA+Q+K
Sbjct: 114 DAAKQFLDSKRRRFPIVE-DGKLVGQISQKDILKAAMQLKQQN 155
>gi|330507501|ref|YP_004383929.1| CBS domain-containing protein [Methanosaeta concilii GP6]
gi|328928309|gb|AEB68111.1| CBS domain protein [Methanosaeta concilii GP6]
Length = 160
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 85/155 (54%), Gaps = 9/155 (5%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD-- 155
V P + A V A +L E +I+G PV+D + +LVG+VS+ DLL L S+
Sbjct: 9 VMPVSVQASANVSEAARLLKENKISGMPVLDGE-RLVGIVSESDLLRLLSVEDESEGSLW 67
Query: 156 -NSMFPEVDSTWKTFNEVQKL---LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
S F + ++ + +++ L + K V D+M+ + ++E+AA ++
Sbjct: 68 LPSPFEIFEVPFRDLVKWERMRSSLKEIPEKEVADVMSRNLHEIGPDDSIEEAASIMTRH 127
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
+ RLPVV+ DG+LVGI+TRG+++ + L + HA +
Sbjct: 128 RINRLPVVE-DGRLVGIVTRGDII-SGLGMAHAED 160
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
V D+M PV V+ + N+ +AARLL E K +PV+D + +LVGI++ +++R
Sbjct: 3 VRDVMNVMPVSVQASANVSEAARLLKENKISGMPVLDGE-RLVGIVSESDLLR 54
>gi|302867253|ref|YP_003835890.1| CBS domain-containing protein [Micromonospora aurantiaca ATCC
27029]
gi|302570112|gb|ADL46314.1| CBS domain containing protein [Micromonospora aurantiaca ATCC
27029]
Length = 234
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
+++L E+ +T PV+D+ +++G+VS+ DL+ G + + + P+
Sbjct: 27 VDVLTERHVTAAPVVDETRRVLGVVSEADLMYKVEFLGQPQ-ERRILPD--------RHR 77
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
++ +K + DLMT PV + + +AARL+ +RLPVV+ G+LVGI+TRG
Sbjct: 78 REARAKAGATLAADLMTAPPVTITPDATIVEAARLMDARGVKRLPVVNDLGRLVGIVTRG 137
Query: 233 NVVRAALQ 240
++++ L+
Sbjct: 138 DLLKVHLR 145
>gi|281423986|ref|ZP_06254899.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris F0302]
gi|281401911|gb|EFB32742.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris F0302]
Length = 494
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 43/173 (24%)
Query: 77 APSSGVYTVGDFMTTKEELH------------VVKPTTTVDEAFVPTALEILVEKRITGF 124
A G+ + M+ +E+ H + P T + V ALE++ + I G
Sbjct: 67 AREGGIGVIHKNMSIEEQAHQVAIVKRAENGMIYDPVTIRRGSTVKDALELMHDYHIGGI 126
Query: 125 PVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 184
PV+DDD KLVG+V++ DL R + M ++D ++++K N
Sbjct: 127 PVVDDDNKLVGIVTNRDL----------RFERRMDKKID----------EVMTKEN---- 162
Query: 185 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
V + T+L AA++L E K +LPVVD + +LVG+IT ++ +A
Sbjct: 163 -------LVTTHQQTDLVAAAQILQENKIEKLPVVDKNNRLVGLITYKDITKA 208
>gi|169830475|ref|YP_001716457.1| hypothetical protein Daud_0264 [Candidatus Desulforudis audaxviator
MP104C]
gi|169637319|gb|ACA58825.1| CBS domain containing protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 153
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 84/156 (53%), Gaps = 15/156 (9%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MT+ E+ V P V++ ++L+E I+G PV+D+ KLVG+V++ DL+ +
Sbjct: 8 DIMTS--EVITVHPEDDVEKV-----AQLLLEHHISGLPVVDEGGKLVGVVTEGDLVFRE 60
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLED 203
+ ++ V + + ++ + +T + VGDLM+ V +ED
Sbjct: 61 K-----KVRAPLYVMVFDSLIYLEKPKRFIEEIRRTVAQKVGDLMSTKLYTVGPEAPIED 115
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
A ++++ R+PVVDA+ +L+GII+R +++RA
Sbjct: 116 VATIIVDRGINRVPVVDAENRLLGIISRQDIIRATF 151
>gi|325300047|ref|YP_004259964.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salanitronis
DSM 18170]
gi|324319600|gb|ADY37491.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salanitronis
DSM 18170]
Length = 491
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL I+ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSTVKDALGIMAEYKIGGIPVVDDENYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + M +D ++++K N ++T AP T++E A+ +L K
Sbjct: 144 RFERDMSKHID----------EVMTKEN------IVTTAP-----GTDMETASEILQRNK 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD +GKL+G+IT ++ +A
Sbjct: 183 IEKLPVVDENGKLIGLITYKDITKA 207
>gi|16262787|ref|NP_435580.1| hypothetical protein SMa0636 [Sinorhizobium meliloti 1021]
gi|14523419|gb|AAK64992.1| conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length = 217
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 76/137 (55%), Gaps = 13/137 (9%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSISGSGRADNSMFPEVDST 165
V A +++ + ++G PV+DDD L+G++S+ DL+ L S + AD ++ P+
Sbjct: 14 VRQAAKLMFDHHVSGVPVVDDDGHLLGVISEGDLIRRAELCSEASVLMADMAIDPD---- 69
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
+ + + + + VGD+MT PV + E L A L+ E +R+PVV DG+L
Sbjct: 70 ----DRANAFIRRCSWR-VGDVMTANPVTIEEEAPLARVAGLMQERGIKRIPVV-RDGEL 123
Query: 226 VGIITRGNVVRAALQIK 242
VGI++R ++++A K
Sbjct: 124 VGIVSRADLLQAIFSTK 140
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 188 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
MT V + ++ AA+L+ + +PVVD DG L+G+I+ G+++R A
Sbjct: 1 MTTKVVKLSPDDSVRQAAKLMFDHHVSGVPVVDDDGHLLGVISEGDLIRRA 51
>gi|383762105|ref|YP_005441087.1| hypothetical protein CLDAP_11500 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381382373|dbj|BAL99189.1| hypothetical protein CLDAP_11500 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 286
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
+P +L I+G PV+D+ KLVG+V+D+DL+ ++ R + + +
Sbjct: 20 IPEVARLLRAHDISGMPVLDETGKLVGVVTDHDLILRNAPIREPRYFAVLSGYIPLNLEE 79
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ ++ L T GD++ P V T LE+A L+L + LPV+D +G++VG+
Sbjct: 80 YRHYREQLRHTMAVTAGDMVEPDIPTVTPDTPLEEAMELMLNPQVTILPVLD-EGEVVGV 138
Query: 229 ITRGNVVRAALQIKHATE 246
+TR ++VR Q++ A +
Sbjct: 139 VTRTDLVRLIEQLEGAVD 156
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
V D+M+ + VR T + + ARLL +PV+D GKLVG++T +++
Sbjct: 2 FVRDIMSSPAITVRTDTRIPEVARLLRAHDISGMPVLDETGKLVGVVTDHDLI 54
>gi|297197540|ref|ZP_06914937.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197715588|gb|EDY59622.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 234
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 71/128 (55%), Gaps = 8/128 (6%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS--GRADNSMFPEVDSTWKTFNEV 172
+L + RI+G PV+D+D K++G++S+ DL+ + + G P + +
Sbjct: 20 LLADHRISGLPVVDEDDKVIGVISETDLVVRQAATPDPFGPPRRRWLPALTRS------A 73
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
++ +K + G LMT PV V ++ +AAR + + RLPV+D + +LVGI+TR
Sbjct: 74 RQQAAKVEARTAGRLMTEPPVTVHADDSIVEAARTMAQRCVERLPVLDEEHRLVGIVTRR 133
Query: 233 NVVRAALQ 240
++++ L+
Sbjct: 134 DLLQVFLR 141
>gi|239621972|ref|ZP_04665003.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239515163|gb|EEQ55030.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 683
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++G PV++ D +LVG VSD D++ S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSGLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
>gi|315656165|ref|ZP_07909056.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
gi|315493167|gb|EFU82767.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
Length = 212
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 76/152 (50%), Gaps = 19/152 (12%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P T A VP A+E++ IT PV+ D KL G+VS DL N
Sbjct: 10 NPFTIDSGATVPDAIELMQTHGITKLPVLRD-GKLCGVVSQLDL-------------NRA 55
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
P D+T +F EV LLSK + +M P + LE+AA L+ +TK LPV
Sbjct: 56 LPS-DATSLSFGEVAYLLSKLK---IYKIMRKNPPTIVPDAMLEEAAILMRDTKVEILPV 111
Query: 219 VDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+D +GK+VG+IT +V+ A + I A E G +
Sbjct: 112 LD-EGKVVGVITESDVLDAFIDINGAREPGTR 142
>gi|424918521|ref|ZP_18341885.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392854697|gb|EJB07218.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 226
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 85/151 (56%), Gaps = 19/151 (12%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MTT + ++PT +V A + ++++ ++G PV+DD ++ G++++ DLL
Sbjct: 5 DIMTTS--VVSIRPTVSVRHA-----VSVMMQANVSGLPVVDDGGRVCGMLTEGDLLLRR 57
Query: 147 SISGSGRADNS--MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
I + R+ + + E+D +++ + TNG V D+M+P +V + + D
Sbjct: 58 EIRATTRSSRAGEIISEID--------LERYIC-TNGWSVADVMSPDVIVATPDSEVSDI 108
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
A L + +RLP+V+ DG+LVGI++R +++
Sbjct: 109 AESLQAHRIKRLPIVE-DGRLVGIVSRRDIL 138
>gi|390935988|ref|YP_006393547.1| putative transporter [Bifidobacterium bifidum BGN4]
gi|389889601|gb|AFL03668.1| putative transporter [Bifidobacterium bifidum BGN4]
Length = 683
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D A + + + ++ PV++ D +LVG VSD D++ S + ++
Sbjct: 536 QPYSCLDSADITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSADITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 MKS 582
>gi|299132334|ref|ZP_07025529.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
gi|298592471|gb|EFI52671.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
Length = 242
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 14/142 (9%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P T + + A +++E RI+G PV+D KLVG++++ D + I R
Sbjct: 10 NPITVTEGTSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRAEIGTQTRR---- 65
Query: 159 FPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 214
+ W F G+ VG++M PV V E T+LE+ RL+ + +
Sbjct: 66 -----ARWLAFFVGPGRAATEFVHEQGRKVGEVMNAQPVTVTEQTSLEEIVRLMEKHNIK 120
Query: 215 RLPVVDADGKLVGIITRGNVVR 236
RLPVV +L+GI+TR +++R
Sbjct: 121 RLPVVRG-LQLLGIVTRTDLLR 141
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+MT P+ V E T+L +AA L+LE + LPVVD GKLVGIIT G+ VR A
Sbjct: 6 VMTRNPITVTEGTSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRA 57
>gi|313149549|ref|ZP_07811742.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
3_1_12]
gi|313138316|gb|EFR55676.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
3_1_12]
Length = 491
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + +M +D ++++K N V ++T+LE AA++L K
Sbjct: 144 RFERNMDKRID----------EVMTKEN-----------LVTTNQSTDLEAAAQILQHHK 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD +GKL+G++T ++ +A
Sbjct: 183 IEKLPVVDKEGKLIGLVTYKDITKA 207
>gi|218297190|ref|ZP_03497852.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
gi|218242467|gb|EED09006.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
Length = 150
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 84/161 (52%), Gaps = 20/161 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MT E +++P T++EA A +IL E R GFPV+D++ +L+GL+ +LL
Sbjct: 3 VADLMTRAPE--ILRPKATLEEA----ARKIL-ETRYGGFPVVDEEGRLLGLLQVEELLP 55
Query: 145 LDSISGSGRADNSMFPEVDS-----TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 199
R +N F +V++ W +Q++ + V +M V
Sbjct: 56 --------RPENVPFSDVEALQLFGEWVDEGTLQEIYRRYQSTPVEAVMLKEIPRVHPED 107
Query: 200 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
L A ++LL T+ R LPVVD + K+VGI+TR ++++ L+
Sbjct: 108 PLGKALQVLLTTEVRHLPVVDQEDKVVGILTRSDILKLILR 148
>gi|294672823|ref|YP_003573439.1| inosine-5'-monophosphate dehydrogenase [Prevotella ruminicola 23]
gi|294473021|gb|ADE82410.1| inosine-5'-monophosphate dehydrogenase [Prevotella ruminicola 23]
Length = 493
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 31/129 (24%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V ALEI+ E I G PV+DDD +LVG+V++ DL R D
Sbjct: 111 VAQALEIMSEYHIGGIPVVDDDRRLVGIVTNRDLRF------ERRLDRP----------- 153
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
V++++SK N V + T+L AA++L E K +LPVVD D +L+G+
Sbjct: 154 ---VEEIMSKEN-----------LVTTHQQTDLTAAAQILQENKIEKLPVVDKDNRLIGL 199
Query: 229 ITRGNVVRA 237
IT ++ +A
Sbjct: 200 ITYKDITKA 208
>gi|373857726|ref|ZP_09600466.1| CBS domain containing protein [Bacillus sp. 1NLA3E]
gi|372452397|gb|EHP25868.1| CBS domain containing protein [Bacillus sp. 1NLA3E]
Length = 158
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 12/153 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFM + + KP+TTV E + IL RI G PV+DD LVG+VSD D++
Sbjct: 3 VRDFMIRR--IFTAKPSTTVKEL-----ISILETNRIGGVPVVDDKGNLVGIVSDGDIVR 55
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV-VVRETTNLED 203
S + S + +++ +L K + D+M + + + E
Sbjct: 56 F----LSPNKEKIYLAYYISYIEEAQKIEDVLRKRLNTPIEDIMVKKNIKTLAPDDDFES 111
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
A RL+ ++++PVV+ G++VGII+RG+++
Sbjct: 112 AIRLISRHHFKKIPVVNGAGRVVGIISRGDIIH 144
>gi|407710625|ref|YP_006794489.1| hypothetical protein BUPH_05583 [Burkholderia phenoliruptrix
BR3459a]
gi|407239308|gb|AFT89506.1| CBS domain-containing protein [Burkholderia phenoliruptrix BR3459a]
Length = 230
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 14/131 (10%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF-- 169
A + V+ I+G PV+D + K+VG+VS DLL R +N W F
Sbjct: 23 AARLFVDNHISGMPVLDANGKVVGIVSQGDLLH--------RVENGTRHGKRRWWLEFLL 74
Query: 170 ---NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 226
E K +G VGD+M + + + L+ A L+ +R+PV+ DGKLV
Sbjct: 75 SSPREQAARYVKEHGHNVGDVMCTQVITIADDMPLDQVADLMERRHLKRVPVL-KDGKLV 133
Query: 227 GIITRGNVVRA 237
GI++R N++RA
Sbjct: 134 GIVSRSNLIRA 144
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
D+MT A V + DAARL ++ +PV+DA+GK+VGI+++G+++ ++++ T
Sbjct: 5 DIMTTAVVTATPDMTIYDAARLFVDNHISGMPVLDANGKVVGIVSQGDLLH---RVENGT 61
Query: 246 EMGAQ 250
G +
Sbjct: 62 RHGKR 66
>gi|344340335|ref|ZP_08771261.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
gi|343799993|gb|EGV17941.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
Length = 154
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 17/126 (13%)
Query: 120 RITGFPVIDDDWKLVGLVSDYDLL-----ALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
R G PV+D D KLVG++++ DLL LD + G ++D ++E+ +
Sbjct: 31 RFHGLPVVDGDEKLVGIIAERDLLHSLFPKLDKLIAEGMHS----VDLDKEMARYSEILE 86
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L ++ +LMTP PV V ++ AA +++ +RR+PV D G+LVG+++ G+V
Sbjct: 87 LKTE-------ELMTPNPVTVDPEMHVLRAATVMVRHNFRRIPVAD-QGRLVGMLSIGDV 138
Query: 235 VRAALQ 240
+A Q
Sbjct: 139 HKAIFQ 144
>gi|414164101|ref|ZP_11420348.1| hypothetical protein HMPREF9697_02249 [Afipia felis ATCC 53690]
gi|410881881|gb|EKS29721.1| hypothetical protein HMPREF9697_02249 [Afipia felis ATCC 53690]
Length = 242
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P T ++ + A +++E RI+G PV+D KLVG++++ D + I +
Sbjct: 10 NPITVTEDTSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRAEIGTQTKR---- 65
Query: 159 FPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 214
+ W F G+ VG++M PV V E T+LE+ RL+ + +
Sbjct: 66 -----ARWLAFFVGPGRAATEFVHEQGRKVGEVMNSRPVTVTELTSLEEVVRLMEKHNIK 120
Query: 215 RLPVVDADGKLVGIITRGNVVR 236
RLPVV +L+GI+TR +++R
Sbjct: 121 RLPVVRG-MQLLGIVTRTDLLR 141
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 243
V +MT P+ V E T+L +AA L+LE + LPVVD GKLVGIIT G+ VR A
Sbjct: 3 VHQVMTRNPITVTEDTSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRA----- 57
Query: 244 ATEMGAQ 250
E+G Q
Sbjct: 58 --EIGTQ 62
>gi|409399062|ref|ZP_11249434.1| hypothetical protein MXAZACID_00460 [Acidocella sp. MX-AZ02]
gi|409131706|gb|EKN01395.1| hypothetical protein MXAZACID_00460 [Acidocella sp. MX-AZ02]
Length = 233
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 19/156 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MT ++ + P T++ TA +V +I+G PV+D +LVG++S+ DLL
Sbjct: 3 VADVMT--RDVVAIDPQTSL-----ATAAGWMVSHQISGLPVLDQAGRLVGILSEGDLLH 55
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKL---LSKTNGKMVGDLMTPAPVVVRETTNL 201
+ G+ M + + L + T+G+ VGD+MT P VR L
Sbjct: 56 RPELGTCGKQAGWM--------RGIMRAEILAADYAHTHGRQVGDVMTRNPSFVRPDLPL 107
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
AA L+ + + +RLPV+ + LVG++ R +++RA
Sbjct: 108 AKAADLMRQKQVKRLPVLQGE-TLVGMLCRFDILRA 142
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
+V D+MT V + T+L AA ++ + LPV+D G+LVGI++ G+++
Sbjct: 2 IVADVMTRDVVAIDPQTSLATAAGWMVSHQISGLPVLDQAGRLVGILSEGDLL------- 54
Query: 243 HATEMG 248
H E+G
Sbjct: 55 HRPELG 60
>gi|52632001|gb|AAU85401.1| inosine-5'-monophosphate dehydrogenase [uncultured archaeon
GZfos12E1]
Length = 187
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 6/124 (4%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST---WKTFNE 171
+L E +I G PV+++ ++VG++S+ D+L L + S+F D + ++
Sbjct: 61 VLKENKIAGVPVLNEREEVVGVISEADVLKL---LENFHWYTSIFTAHDLMNIFGEDLHD 117
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
VQ+ + K + V D+M+ P V T ++DAA+++ T + RLPVVD + KLVGI+ R
Sbjct: 118 VQQDIEKASKMKVKDVMSKKPETVPPDTLIDDAAQIMHSTGFNRLPVVDENDKLVGIVAR 177
Query: 232 GNVV 235
+++
Sbjct: 178 ADII 181
>gi|298206971|ref|YP_003715150.1| Inosine monophosphate dehydrogenase-related protein [Croceibacter
atlanticus HTCC2559]
gi|83849605|gb|EAP87473.1| Inosine monophosphate dehydrogenase-related protein [Croceibacter
atlanticus HTCC2559]
Length = 154
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 34/173 (19%)
Query: 76 AAPSSG---VYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWK 132
A P+ G TV D+M+ K L P+ V E ++ LV+ +I+G PV++D +
Sbjct: 11 AKPTKGSKEQITVSDYMSRK--LVTFTPSQNVMEV-----IQTLVKHKISGGPVVNDQNE 63
Query: 133 LVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP 192
LVG++S+ D + IS S R N P D+T V+K MV D+ T
Sbjct: 64 LVGIISEGD--CIKQISDS-RYHN--LPMDDAT------VEK-------HMVRDVET--- 102
Query: 193 VVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
+ N+ DAA L K RR P+V+ +GKLVG+I++ ++++AAL +K
Sbjct: 103 --IDGNMNIFDAANQFLSAKRRRFPIVE-EGKLVGLISQKDILKAALNLKQQN 152
>gi|357061469|ref|ZP_09122221.1| inosine-5'-monophosphate dehydrogenase [Alloprevotella rava F0323]
gi|355373957|gb|EHG21260.1| inosine-5'-monophosphate dehydrogenase [Alloprevotella rava F0323]
Length = 493
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 33/142 (23%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
+ P T + V AL+++ E I G PV+DD+ LVG+V++ DL R +N
Sbjct: 100 IYDPVTIHRGSTVGGALQLMTEYHIGGIPVVDDEMHLVGIVTNRDL----------RFEN 149
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRR 215
+ +V+ D+MT +V + T+L AAR+L E K +
Sbjct: 150 DLQKKVE----------------------DVMTKENLVTTTQQTDLAGAARILQENKIEK 187
Query: 216 LPVVDADGKLVGIITRGNVVRA 237
LPVVD + LVG+IT ++ +A
Sbjct: 188 LPVVDTENHLVGLITYKDITKA 209
>gi|336476762|ref|YP_004615903.1| putative signal transduction protein with CBS domains
[Methanosalsum zhilinae DSM 4017]
gi|335930143|gb|AEH60684.1| putative signal transduction protein with CBS domains
[Methanosalsum zhilinae DSM 4017]
Length = 154
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 77/128 (60%), Gaps = 6/128 (4%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD-NSMFPEVDSTWK---TF 169
++L + I+G PV++ + KL+GL+S+ DLL L I G S F ++ + ++
Sbjct: 25 QLLRKNEISGMPVVESE-KLIGLISELDLLQLLEIPKHGTYWLPSPFEVIEIPIRELISW 83
Query: 170 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
E +++L+ K V ++M V ++E+A+ ++++ K RLPVV ++GKLVGI+
Sbjct: 84 EEAKRMLTNIGTKPVKEIMRTKIYTVSPEDSIEEASTIMIKNKINRLPVV-SEGKLVGIV 142
Query: 230 TRGNVVRA 237
TRG++++
Sbjct: 143 TRGDIIKG 150
>gi|435853072|ref|YP_007314391.1| CBS-domain-containing membrane protein [Halobacteroides halobius
DSM 5150]
gi|433669483|gb|AGB40298.1| CBS-domain-containing membrane protein [Halobacteroides halobius
DSM 5150]
Length = 148
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 18/130 (13%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLAL-------DSISGSGRADNSMFPEVDSTW 166
+I++E I+G PVI+DD KLVG++S+ DL+ D I G +F
Sbjct: 25 QIMIENSISGLPVIEDD-KLVGIISEGDLIVKEKKLDLPDYIYVLG----GIF-----YL 74
Query: 167 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 226
++F++ ++ L K G V DLMT + V +++ D A + +E R+PVV D KL+
Sbjct: 75 ESFDDFEQDLKKMAGIEVADLMTKDVITVGPQSDVMDIATIFVEEGVNRVPVV-KDNKLL 133
Query: 227 GIITRGNVVR 236
GI+TR +++R
Sbjct: 134 GIVTRADIIR 143
>gi|296132180|ref|YP_003639427.1| hypothetical protein TherJR_0656 [Thermincola potens JR]
gi|296030758|gb|ADG81526.1| CBS domain containing membrane protein [Thermincola potens JR]
Length = 150
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 18/155 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-- 144
D MT +E+ +P TV E +IL +K+I+G PV+D+ K+VG+V++ DLL
Sbjct: 5 DIMT--KEVITARPEQTVREVA-----KILADKKISGVPVVDEAGKIVGIVTEADLLVQT 57
Query: 145 --LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
L S ++ + E ++ L K V D+MT V V E +E
Sbjct: 58 QKLKVPSYVQLLGGIIY------LDSVKEFEEDLRKAVAVQVKDIMTTDVVTVEEDAEIE 111
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
D A + + RLPVV DG LVGI++R ++V+A
Sbjct: 112 DIATTMADEGINRLPVV-RDGALVGIVSRADIVKA 145
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
D+MT + R + + A++L + K +PVVD GK+VGI+T +++ ++K
Sbjct: 5 DIMTKEVITARPEQTVREVAKILADKKISGVPVVDEAGKIVGIVTEADLLVQTQKLK 61
>gi|309792767|ref|ZP_07687211.1| CBS domain-containing protein [Oscillochloris trichoides DG-6]
gi|308225177|gb|EFO78961.1| CBS domain-containing protein [Oscillochloris trichoides DG6]
Length = 419
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 24/169 (14%)
Query: 76 AAPSSGVYTVGDFMTTKEELHVVKPT-TTVDEAFVPTALEILVEKRITGFPVIDDDWKLV 134
+ P G TVGD M KP T EA V TAL +L++ R++ P+ D++ +LV
Sbjct: 112 SGPLKGDRTVGDVMR--------KPAPTAASEANVSTALALLIKHRLSALPISDEEGRLV 163
Query: 135 GLVSDYDL---LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPA 191
GL+S+ +L L L R ++F + T +E L++ + + ++M+
Sbjct: 164 GLLSEQELAWRLGL-------RLPLNLFGHL-----TPDERDTLVAPRINRPLREVMSAE 211
Query: 192 PVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
P V T+L A ++E Y +PVVD +GK+VGII + +V+R ++
Sbjct: 212 PRSVSIFTSLPQALVTMVEWGYPHVPVVDREGKVVGIIGQEDVLRVVVE 260
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+ P P VR + AA+ LLE + LPVVD++ +L+GII RG +VRA LQ
Sbjct: 363 FVQPDPPTVRPEMPISQAAQRLLELGHESLPVVDSEQRLLGIIARGGLVRAILQ 416
>gi|187920973|ref|YP_001890005.1| signal transduction protein [Burkholderia phytofirmans PsJN]
gi|187719411|gb|ACD20634.1| putative signal transduction protein with CBS domains [Burkholderia
phytofirmans PsJN]
Length = 229
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P TV E I V+ I+G PV+D D + G++S+ DL I R S
Sbjct: 14 VTPEMTVREV-----ARIFVDNGISGAPVLDRDGHVAGMISEGDLFRRAEIGTDERTRTS 68
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
W E + + KT+ V D+MT V V+ T L + A +L + +R+P
Sbjct: 69 WL----DFWSASEEARDYI-KTHALKVRDVMTTDVVTVQPETQLGEVAGILETRRIKRVP 123
Query: 218 VVDADGKLVGIITRGNVVRA 237
V DA G+LVGI++R N+V+A
Sbjct: 124 VTDA-GRLVGIVSRANLVQA 142
>gi|307354738|ref|YP_003895789.1| putative signal transduction protein [Methanoplanus petrolearius
DSM 11571]
gi|307157971|gb|ADN37351.1| putative signal transduction protein with CBS domains
[Methanoplanus petrolearius DSM 11571]
Length = 162
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 81/145 (55%), Gaps = 11/145 (7%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T +A V A IL ++RI G PV+D + +L G+V++ DLL+L + +D+
Sbjct: 11 PVTVQADAKVSEAASILRKRRIGGIPVMDGE-RLAGIVTETDLLSL--LDVGELSDDLWL 67
Query: 160 PE----VDSTWKTF---NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
P ++ + F + +K L+ + + D+M+ + + E +E+AA+L+L
Sbjct: 68 PSPLEIIEIPIREFVNWEKTRKALTDISESPISDIMSTDVIYIDENAEIEEAAKLMLSEG 127
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
RLPVV +D +LVGI+TR ++VR
Sbjct: 128 IARLPVVKSD-RLVGIVTRQDIVRG 151
>gi|92117451|ref|YP_577180.1| signal-transduction protein [Nitrobacter hamburgensis X14]
gi|91800345|gb|ABE62720.1| putative signal-transduction protein with CBS domains [Nitrobacter
hamburgensis X14]
Length = 242
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P TT+ +A ++++ I+G PVI+ KLVG++S+ D + I R
Sbjct: 14 VNPDTTIVDAA-----NTMLKQHISGLPVINAAGKLVGIISEGDFIRRAEIGTQRRR--- 65
Query: 158 MFPEVDSTWKTF-----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
+ W F + + + G+ VG++MTP P V E T LED + +
Sbjct: 66 ------ARWLKFLLGAGRDASDFVHE-QGRKVGEIMTPNPCTVSEDTLLEDIVTTMEKNS 118
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+RLPV+ D ++VGI+TR N+++A
Sbjct: 119 IKRLPVMRGD-QIVGIVTRANLLQA 142
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
+MT V T + DAA +L+ LPV++A GKLVGII+ G+ +R A E
Sbjct: 6 IMTRQVTTVNPDTTIVDAANTMLKQHISGLPVINAAGKLVGIISEGDFIRRA-------E 58
Query: 247 MGAQ 250
+G Q
Sbjct: 59 IGTQ 62
>gi|347753627|ref|YP_004861192.1| CBS domain-containing membrane protein [Bacillus coagulans 36D1]
gi|347586145|gb|AEP02412.1| CBS domain containing membrane protein [Bacillus coagulans 36D1]
Length = 153
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 12/153 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFM ++ VK TT+ E L++L RI G PV+D + KL+G++SD D++
Sbjct: 3 VKDFMI--RDVITVKKETTIREL-----LKVLAHHRIGGVPVVDAEGKLLGMISDGDVIR 55
Query: 145 LDSISGSGRADNSMFPE-VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ R + V + + FNE KL+ + + + VR + E+
Sbjct: 56 F--LQPKARTVYDFYITIVVNEQEDFNE--KLVHSLDFPVEKIMKRRELYTVRPEDDFEN 111
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
A R+L + +++LPVV+ G++VG+I+RG+++R
Sbjct: 112 ALRILAKHHFKKLPVVNQAGRVVGVISRGDIMR 144
>gi|436842251|ref|YP_007326629.1| CBS domain containing membrane protein [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432171157|emb|CCO24528.1| CBS domain containing membrane protein [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 151
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 79/140 (56%), Gaps = 9/140 (6%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD-SISGSGRADNSMFPEVDS 164
E + A ++L++K + G PV+D +LVG++ DL+A SIS S+F +D
Sbjct: 18 ETEIGAAAKLLLDKHLNGVPVVDKAGELVGVICQSDLVAQQKSISMP-----SLFTILDG 72
Query: 165 --TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 222
+ +++++ ++K V MTP PV V T++E A L++E K LPVV+ D
Sbjct: 73 FIPLSSNDDLEREVNKIAATKVAHAMTPDPVTVTPDTSIEKIADLMVERKLYTLPVVE-D 131
Query: 223 GKLVGIITRGNVVRAALQIK 242
GKL+G++ + +V++ + K
Sbjct: 132 GKLIGVVGKEDVLKVLTKAK 151
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
D+MT + + T + AA+LLL+ +PVVD G+LVG+I + ++V
Sbjct: 6 DIMTSGALTLEPETEIGAAAKLLLDKHLNGVPVVDKAGELVGVICQSDLV 55
>gi|336122097|ref|YP_004576872.1| signal transduction protein with CBS domains [Methanothermococcus
okinawensis IH1]
gi|334856618|gb|AEH07094.1| putative signal transduction protein with CBS domains
[Methanothermococcus okinawensis IH1]
Length = 154
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 8/145 (5%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD--- 155
KP V +++ + +I+G PVIDDD LVG++S+ D++ + + R D
Sbjct: 10 KPIVVNQNNDVREVIKLFRKYKISGAPVIDDDRNLVGIISESDIIKTLT-THDDRFDIIL 68
Query: 156 NSMFPEVDSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
S F ++ KT E ++ + K V D+MT + V T + +AA ++++ K
Sbjct: 69 PSPFDLIELPLKTTLKIEEFREDIEKALKTKVKDVMTKDVITVSPDTPINEAAEIMIKHK 128
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+RLPV+ +G+LVGI+TRG+++ A
Sbjct: 129 IKRLPVI-KNGELVGIVTRGDLIEA 152
>gi|222100721|ref|YP_002535289.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
gi|221573111|gb|ACM23923.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
Length = 150
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTWK 167
V T +++L + ++G PV+D D ++VG VS+ DL+ AL S S P+
Sbjct: 20 VETVIKLLSRQNLSGIPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDT----- 74
Query: 168 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 227
N++ + + K K + + M+ PVVV+E L AA L+ ++ LPVVD +LVG
Sbjct: 75 --NQLIRNIVKIKDKPISNYMSKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDDSMQLVG 132
Query: 228 IITRGNVVRAA 238
I+ R +V+R
Sbjct: 133 IVRRIDVLRVV 143
>gi|423280578|ref|ZP_17259490.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
610]
gi|424665169|ref|ZP_18102205.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
616]
gi|404575033|gb|EKA79778.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
616]
gi|404583785|gb|EKA88458.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
610]
Length = 491
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKQGSTVRDALALMSEYKIGGIPVVDDNRYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + +M +D ++++K N V ++T+LE AA++L K
Sbjct: 144 RFERNMDKRID----------EVMTKEN-----------LVTTNQSTDLEAAAQILQHHK 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD +GKL+G++T ++ +A
Sbjct: 183 IEKLPVVDKEGKLIGLVTYKDITKA 207
>gi|284043348|ref|YP_003393688.1| hypothetical protein Cwoe_1887 [Conexibacter woesei DSM 14684]
gi|283947569|gb|ADB50313.1| CBS domain containing membrane protein [Conexibacter woesei DSM
14684]
Length = 153
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 24/162 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M P T E V T L++L + G PV++ + VG+V++ DL+
Sbjct: 3 TVADIMERD-------PITVSPEDSVETLLKVLRTHELPGVPVVNGGGRPVGIVTEADLV 55
Query: 144 ALDSISGSGRADNSMFPEVD--------STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV 195
+D D + +D K F E K VGD+MT P+ V
Sbjct: 56 MVDE-----EEDLRLPLHIDLFGAQIFLGPVKRFEE---RFRKAIAATVGDMMTEDPITV 107
Query: 196 RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
T++++AAR++ E ++ RLPVV+ G+LVG++TR +V+ A
Sbjct: 108 DADTDVKEAARIIAERRHNRLPVVEH-GRLVGVVTRLDVLEA 148
>gi|317504769|ref|ZP_07962728.1| inosine-5'-monophosphate dehydrogenase [Prevotella salivae DSM
15606]
gi|315664100|gb|EFV03808.1| inosine-5'-monophosphate dehydrogenase [Prevotella salivae DSM
15606]
Length = 494
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 43/173 (24%)
Query: 77 APSSGVYTVGDFMTTKEELH------------VVKPTTTVDEAFVPTALEILVEKRITGF 124
A G+ + M+ +E+ H + P T + V AL ++ + I G
Sbjct: 67 AREGGIGVIHKNMSIEEQAHQVAIVKRAENGMIYDPVTIRRGSSVKDALALMHDYHIGGI 126
Query: 125 PVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 184
PV+DDD KLVG+V++ DL R + M ++D ++++K N
Sbjct: 127 PVVDDDNKLVGIVTNRDL----------RFERHMDKKID----------EVMTKDN---- 162
Query: 185 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
V + T+L AA++L E K +LPVVD D LVG+IT ++ +A
Sbjct: 163 -------LVTTHQQTDLGAAAQILQENKIEKLPVVDKDNHLVGLITYKDITKA 208
>gi|317153451|ref|YP_004121499.1| hypothetical protein Daes_1741 [Desulfovibrio aespoeensis Aspo-2]
gi|316943702|gb|ADU62753.1| CBS domain containing protein [Desulfovibrio aespoeensis Aspo-2]
Length = 150
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 148
M +++ K T + + TA +L+E +I G PVID+ +VG++ DL+A
Sbjct: 1 MLKAKDIMTAKCITLTPDTDIATAARVLLENKINGAPVIDEKGTVVGVLCQADLVA---- 56
Query: 149 SGSGRADNSMFPEVDSTW--KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
S F +D + + +E+++ ++K V + MT AP V+ T ++D A
Sbjct: 57 QQKKITLPSFFTLLDGVFPLSSHDELEREITKIAALKVAEAMTAAPTVIAPDTGIDDIAT 116
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
++ K LPV+D +G+LVG++ + +V++ L+
Sbjct: 117 MMANKKLYTLPVLD-NGRLVGVVGKEDVLKTLLK 149
>gi|387906284|ref|YP_006336621.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
gi|387581176|gb|AFJ89890.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
Length = 230
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
E V ++LVE I+ PV D D KL+G++S+ DL+ I G+G S + E+ +
Sbjct: 17 EMGVQETAKLLVEHSISAVPVADADGKLIGIISEGDLVRRVEI-GTGARRRSWWLELLA- 74
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
+ E+ K + + V DLM+ V V E T L + A LL + +R+PVV D K+
Sbjct: 75 --SSRELASQYVKEHAQTVKDLMSINVVTVDEDTPLSEVAELLERYRIKRVPVVKND-KV 131
Query: 226 VGIITRGNVVRA 237
G+++R ++VRA
Sbjct: 132 TGLVSRADLVRA 143
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MT + +++ A+LL+E +PV DADGKL+GII+ G++VR
Sbjct: 5 DVMTTPVIFATPEMGVQETAKLLVEHSISAVPVADADGKLIGIISEGDLVR 55
>gi|170287905|ref|YP_001738143.1| CBS domain-containing protein [Thermotoga sp. RQ2]
gi|403252570|ref|ZP_10918879.1| CBS domain-containing protein [Thermotoga sp. EMP]
gi|170175408|gb|ACB08460.1| CBS domain containing membrane protein [Thermotoga sp. RQ2]
gi|402812060|gb|EJX26540.1| CBS domain-containing protein [Thermotoga sp. EMP]
Length = 150
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTWK 167
V T +++L + ++G PV+D D ++VG VS+ DL+ AL S S P+
Sbjct: 20 VETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDT----- 74
Query: 168 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 227
N++ + + K + V D M PVVV+E L AA L+ ++ LPVVD +LVG
Sbjct: 75 --NQLIRNVVKIKDRPVSDFMNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDEAMQLVG 132
Query: 228 IITRGNVVRAA 238
I+ R +++R
Sbjct: 133 IVRRIDILRVV 143
>gi|124023450|ref|YP_001017757.1| IMP dehydrogenase-like protein [Prochlorococcus marinus str. MIT
9303]
gi|123963736|gb|ABM78492.1| IMP dehydrogenase-like protein [Prochlorococcus marinus str. MIT
9303]
Length = 156
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 84/158 (53%), Gaps = 17/158 (10%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D M+T L VV P T++ EA ++++ + I+G PV++DD LVG +++ DL+
Sbjct: 6 TVKDVMSTPV-LSVV-PATSLQEA-----VQLMTDHHISGLPVVNDDGTLVGELTEQDLM 58
Query: 144 ALDSISGSG----RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 199
+S +G D+ ++ W +V ++L G V DLM E
Sbjct: 59 VRESGVDAGPYVLLLDSVIYLRNPLNWD--KQVHQVL----GTSVNDLMRSDTHTCNEAL 112
Query: 200 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
L AA +L + +RL V++ KLVG+ITRG+VVRA
Sbjct: 113 PLPRAAAMLHDRSTQRLFVINDQRKLVGVITRGDVVRA 150
>gi|148269243|ref|YP_001243703.1| CBS domain-containing protein [Thermotoga petrophila RKU-1]
gi|281411541|ref|YP_003345620.1| hypothetical protein Tnap_0098 [Thermotoga naphthophila RKU-10]
gi|147734787|gb|ABQ46127.1| CBS domain containing protein [Thermotoga petrophila RKU-1]
gi|281372644|gb|ADA66206.1| CBS domain containing membrane protein [Thermotoga naphthophila
RKU-10]
Length = 150
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTWK 167
V T +++L + ++G PV+D D ++VG VS+ DL+ AL S S P+
Sbjct: 20 VETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDT----- 74
Query: 168 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 227
N++ + + K + V D M PVVV+E L AA L+ ++ LPVVD +LVG
Sbjct: 75 --NQLIRNVVKIKDRPVSDFMNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDEAMQLVG 132
Query: 228 IITRGNVVRAA 238
I+ R +++R
Sbjct: 133 IVRRIDILRVV 143
>gi|421735499|ref|ZP_16174422.1| multidrug resistance transporter [Bifidobacterium bifidum IPLA
20015]
gi|407297212|gb|EKF16671.1| multidrug resistance transporter [Bifidobacterium bifidum IPLA
20015]
Length = 683
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D++ S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAVTPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 MKS 582
>gi|453053892|gb|EMF01351.1| hypothetical protein H340_07121 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 209
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVGD MT VV+ + +L E IT PV+D D + VG+VS+ DLL
Sbjct: 6 TVGDLMTHS----VVRVQRG---TLFTEIVHVLHEHDITAVPVVDADDRPVGVVSEADLL 58
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
A + R D S+ V + K LMT V R ++ +
Sbjct: 59 A----KAARRVDPSLPAAVRA-------------KHEATTAEGLMTSPAVCARPDWSVVE 101
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
AAR + E +RLPVVDA+G+LVG+++R +++R L+
Sbjct: 102 AARTMEERHVKRLPVVDAEGRLVGLVSRSDLLRVFLR 138
>gi|377820764|ref|YP_004977135.1| signal-transduction protein [Burkholderia sp. YI23]
gi|357935599|gb|AET89158.1| signal-transduction protein [Burkholderia sp. YI23]
Length = 230
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
E V A + +V I+G PVI++ +LVG+V++ DLL I G+G + + E+ S
Sbjct: 17 EMTVRDAAKTMVLGHISGMPVINETGRLVGMVTEGDLLHRQEI-GTGFKHRAWWLELLS- 74
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
+ E+ K + V D+M+ V V E + + A LL + +R+PV+ DGK+
Sbjct: 75 --STRELASQYIKEHAGKVKDVMSTEVVTVDENCTVAELAELLERRRIKRVPVMR-DGKV 131
Query: 226 VGIITRGNVVRA 237
VG+I+R N++RA
Sbjct: 132 VGLISRANLLRA 143
>gi|345011229|ref|YP_004813583.1| hypothetical protein [Streptomyces violaceusniger Tu 4113]
gi|344037578|gb|AEM83303.1| CBS domain containing membrane protein [Streptomyces violaceusniger
Tu 4113]
Length = 221
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 120 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 179
R++ PV++ + +++G+VS+ DLL + S A + P++ ++K
Sbjct: 36 RVSALPVLEGEGRVIGVVSEADLLPKEEFRDSDPARVAQLPDLPG-----------IAKA 84
Query: 180 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
+LMT + V + L +AAR++ + +RLPVVD +G+L GI++R ++++ L
Sbjct: 85 GAVTADELMTSPAITVHASATLAEAARIMTHKRVKRLPVVDEEGRLEGIVSRADLLKVFL 144
Query: 240 Q 240
+
Sbjct: 145 R 145
>gi|386391963|ref|ZP_10076744.1| hypothetical protein DesU5LDRAFT_1345 [Desulfovibrio sp. U5L]
gi|385732841|gb|EIG53039.1| hypothetical protein DesU5LDRAFT_1345 [Desulfovibrio sp. U5L]
Length = 408
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
+P +++L+ +R+ PVI ++ K+ G+V+ DLL+ + N + +V + +
Sbjct: 129 LPKVVDLLLARRVKAVPVIGENGKVAGVVTGGDLLSRGGMDTRLSLQNILPDDVRAGER- 187
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
++ G D+MT V + E L +AA+++ +RLPVVD G+L+GI
Sbjct: 188 --------ARMAGLTARDVMTSPAVTIGERAGLREAAQVMSRKGLKRLPVVDETGELIGI 239
Query: 229 ITRGNVVRAALQIKHATE 246
++R +++R+A + A E
Sbjct: 240 VSRADILRSASDLAPAAE 257
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 37 LLSRPGCRVFSVLATSSDRVSALRRSSAVFASGTLT-ANSAAPSSGVYTVGDFMTTKEEL 95
++SR G + V+ + + + + R+ + ++ L A A P +T G F ++ +
Sbjct: 218 VMSRKGLKRLPVVDETGELIGIVSRADILRSASDLAPAAEALPR---FTAGLFQQARDVM 274
Query: 96 HVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 155
PT D P + LV + VID D + G+V D DLL GR
Sbjct: 275 FTDVPTAAPDTPL-PEVVARLVASPLRRVVVIDADRTVRGIVLDGDLL--------GRCG 325
Query: 156 NSMFPEVDSTWKTF--NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 213
P + +F E L + + M ++ T V E T L D + +L T+
Sbjct: 326 PERKPGLLKALFSFGREETACPLGRASEVMQTNVYT-----VSEDTPLMDVLQRMLTTRA 380
Query: 214 RRLPVVDADGKLVGIITRGNVVR 236
+RL VVD +G+L+G++ R +++R
Sbjct: 381 KRLVVVDDEGRLLGMVDRESLLR 403
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 100 PTTTVDE-AFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P T+ E A + A +++ K + PV+D+ +L+G+VS D+L R+ + +
Sbjct: 202 PAVTIGERAGLREAAQVMSRKGLKRLPVVDETGELIGIVSRADIL---------RSASDL 252
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
P ++ + L + M D+ T AP T L + L+ + RR+ V
Sbjct: 253 APAAEALPRF---TAGLFQQARDVMFTDVPTAAP-----DTPLPEVVARLVASPLRRVVV 304
Query: 219 VDADGKLVGIITRGNVV 235
+DAD + GI+ G+++
Sbjct: 305 IDADRTVRGIVLDGDLL 321
>gi|393785532|ref|ZP_10373682.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salyersiae
CL02T12C01]
gi|392662287|gb|EIY55851.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salyersiae
CL02T12C01]
Length = 491
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKKGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + M +D ++++K N V ++T+LE AA++L + K
Sbjct: 144 RFERDMNKRID----------EVMTKDN-----------LVTTNQSTDLEAAAQILQKHK 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD D KL+G++T ++ +A
Sbjct: 183 IEKLPVVDKDNKLIGLVTYKDITKA 207
>gi|441146155|ref|ZP_20964045.1| hypothetical protein SRIM_08493 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440620734|gb|ELQ83759.1| hypothetical protein SRIM_08493 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 242
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 5/134 (3%)
Query: 102 TTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 161
TT E ++L I+G PV+D D K++G+VS+ DL++ + R D++ P
Sbjct: 16 TTSPEVPFKEVADLLARHAISGVPVVDRDDKVLGVVSETDLMS----HQAARDDDAPRPW 71
Query: 162 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 221
+ + +K G+ GDLMT V + + +AAR + + RLPV+D
Sbjct: 72 YALR-RRAKSARAARTKAGGRTAGDLMTSPAVTIGPRRTVAEAARTMAAHRVERLPVIDE 130
Query: 222 DGKLVGIITRGNVV 235
+G+L+GI+TR +++
Sbjct: 131 EGRLMGIVTRSDLL 144
>gi|418054606|ref|ZP_12692662.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
gi|353212231|gb|EHB77631.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
Length = 246
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 78/139 (56%), Gaps = 12/139 (8%)
Query: 102 TTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 161
+T E + L++++E+ I+G PV++ KLVG++++ D L + ++ +
Sbjct: 13 STTPECPLSEVLQVMLERHISGLPVVNASGKLVGVITEGD--CLRRVETGTEIKRPLWRQ 70
Query: 162 VDSTWKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
+ F +KL + +G+ V ++MT P+ + E T++ + L+ +++ +RLPV
Sbjct: 71 L------FTGPEKLAQEYIRAHGRKVSEVMTADPITITEDTDVSEIIHLMEKSRIKRLPV 124
Query: 219 VDADGKLVGIITRGNVVRA 237
+ D +VGI++R NV+RA
Sbjct: 125 MRGDA-VVGIVSRANVIRA 142
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MT V L + +++LE LPVV+A GKLVG+IT G+ +R
Sbjct: 5 DIMTTGVVSTTPECPLSEVLQVMLERHISGLPVVNASGKLVGVITEGDCLR 55
>gi|294633387|ref|ZP_06711946.1| CBS domain-containing protein [Streptomyces sp. e14]
gi|292831168|gb|EFF89518.1| CBS domain-containing protein [Streptomyces sp. e14]
Length = 225
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 120 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL--LS 177
+++ PV++ + +++G+VS+ DLL + DS F ++++L L+
Sbjct: 25 KVSALPVLEGEGRVIGVVSEADLLPKEEFR-------------DSDPDRFTQLRRLSDLA 71
Query: 178 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
K G+LM+ V V L +AAR++ + + +RLPVV+A+G L G+++RG++++
Sbjct: 72 KAGALTAGELMSSPAVTVHPDAPLAEAARIMAQRRVKRLPVVNAEGLLEGVVSRGDLLKV 131
Query: 238 ALQ 240
L+
Sbjct: 132 FLR 134
>gi|317482260|ref|ZP_07941281.1| H+ antiporter-1 family protein [Bifidobacterium sp. 12_1_47BFAA]
gi|316916276|gb|EFV37677.1| H+ antiporter-1 family protein [Bifidobacterium sp. 12_1_47BFAA]
Length = 683
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D++ S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVDADG+LVG+I R +V+ A
Sbjct: 652 PVVDADGRLVGVIRRKSVMEHAF 674
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 MKS 582
>gi|312137438|ref|YP_004004775.1| signal transduction protein with cbs domains [Methanothermus
fervidus DSM 2088]
gi|311225157|gb|ADP78013.1| putative signal transduction protein with CBS domains
[Methanothermus fervidus DSM 2088]
Length = 266
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 41/156 (26%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MT K + V P T E +E++ + + GFPV DD KLVG+V+ +DL+
Sbjct: 7 VKDYMTRK--VICVTPETPTSEL-----VELMKKTQHDGFPVTDD-GKLVGMVTSFDLI- 57
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ + K V ++M+ VV RE + DA
Sbjct: 58 --------------------------------TNPSAKKVKEIMSTDVVVTRENMTIHDA 85
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
AR++ RLPVV+ +GK+VGIIT +++R+ ++
Sbjct: 86 ARVMFREGVSRLPVVNGEGKVVGIITNTDIIRSHIE 121
>gi|269955495|ref|YP_003325284.1| inosine-5'-monophosphate dehydrogenase [Xylanimonas cellulosilytica
DSM 15894]
gi|269304176|gb|ACZ29726.1| inosine-5'-monophosphate dehydrogenase [Xylanimonas cellulosilytica
DSM 15894]
Length = 501
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 31/132 (23%)
Query: 118 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS 177
E RI+GFPV+D +L+G+V++ DL F V + W T
Sbjct: 119 EYRISGFPVVDAGGRLIGIVTNRDL---------------RFTPV-AEWAT--------- 153
Query: 178 KTNGKMVGDLMTPAPVVVRETT-NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
V D+MTPAP++ +T + E+A LL + K RLP+VDADG+L G+IT + V+
Sbjct: 154 ----TTVADVMTPAPLITGPSTISREEATLLLRKHKLERLPLVDADGRLAGLITVKDFVK 209
Query: 237 AALQIKHATEMG 248
+ Q +A++ G
Sbjct: 210 SE-QFPNASKDG 220
>gi|398356242|ref|YP_006529569.1| hypothetical protein USDA257_p01520 [Sinorhizobium fredii USDA 257]
gi|399995456|ref|YP_006575694.1| hypothetical protein SFHH103_04680 [Sinorhizobium fredii HH103]
gi|365182303|emb|CCE99153.1| hypothetical protein SFHH103_04680 [Sinorhizobium fredii HH103]
gi|390131489|gb|AFL54869.1| hypothetical protein USDA257_p01520 [Sinorhizobium fredii USDA 257]
Length = 218
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 24/154 (15%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--- 143
D MT K + V P ++ A + ++E RI+G PV DDD KLVG++S+ DLL
Sbjct: 5 DIMTKK--VLSVSPEHSISHAALT-----MLENRISGLPVCDDDRKLVGILSEGDLLRRA 57
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
L S + + PE +KT+ VGD+MT V V E L
Sbjct: 58 ELGSAAWPSAIRDKAEPEA-------------FTKTHSWRVGDVMTQRVVTVDEDAPLGR 104
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
++ + +R+PV+ A+ ++VGII+R +++RA
Sbjct: 105 IGAIMAANQIKRIPVMRAE-EMVGIISRSDILRA 137
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
D+MT + V ++ AA +LE + LPV D D KLVGI++ G+++R A
Sbjct: 5 DIMTKKVLSVSPEHSISHAALTMLENRISGLPVCDDDRKLVGILSEGDLLRRA 57
>gi|440700922|ref|ZP_20883148.1| CBS domain protein [Streptomyces turgidiscabies Car8]
gi|440276455|gb|ELP64712.1| CBS domain protein [Streptomyces turgidiscabies Car8]
Length = 244
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE-VQ 173
+L + RI+G PV+D+D ++G++S+ DL+ + + D P +
Sbjct: 29 LLADHRISGLPVVDEDDHVIGVISETDLM----VRQAATPDPYEPPRHGLGLAGLTRGAR 84
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
+ +K + G LMT PVV + AAR + + + RLPV+D + +LVGI+TR +
Sbjct: 85 RQAAKEKARTAGQLMTEPPVVAHADDTIVQAARTMAQRRVERLPVLDEENRLVGIVTRRD 144
Query: 234 VVRAALQ 240
+++ L+
Sbjct: 145 LLQVFLR 151
>gi|145351771|ref|XP_001420237.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580471|gb|ABO98530.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 133
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 21/141 (14%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR--AD 155
V+P +V EA +++LV+ RI+ PV++ +++G+VS+YDL+A + + AD
Sbjct: 12 VRPDESVFEA-----MKLLVDNRISAVPVVNASGEVLGVVSEYDLMARVGKKETTKSVAD 66
Query: 156 NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 215
+ MFP + + K +G V M A + L +A L+L R
Sbjct: 67 DGMFP-------------RRMYKASGSKVSTAMHEATTCTPDMP-LVEATELMLNGNLAR 112
Query: 216 LPVVDADGKLVGIITRGNVVR 236
+PVVD G LVGI++RG+++R
Sbjct: 113 MPVVDDRGALVGILSRGDIMR 133
>gi|116249487|ref|YP_765325.1| hypothetical protein pRL90028 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254135|emb|CAK03738.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 214
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 175
+++ +I+G PV+D + LVG+VSD D L ++ + R + + + S K +E
Sbjct: 1 MLDNKISGLPVVDANGALVGIVSDGDFLRRSELN-TERKRSWLLEWLTSPGKIADE---- 55
Query: 176 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
+ +G+ V ++MT + T ++ DA RL+ +RLPVV DG+LVGI+ R +++
Sbjct: 56 YVRAHGRRVEEVMTAPVSAIAPTASISDAVRLMERRDIKRLPVV-TDGRLVGIVARSDLL 114
Query: 236 RAALQ 240
RA Q
Sbjct: 115 RALSQ 119
>gi|456353952|dbj|BAM88397.1| conserved hypothetical protein [Agromonas oligotrophica S58]
Length = 242
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 101 TTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 160
T T D + V A I++++ ++G PV+D KLVG+VS+ D + I G+GR
Sbjct: 13 TVTPDTSIVDAA-NIMLQRHVSGLPVVDAAGKLVGVVSEGDFIRRTEI-GTGRKRGRWLR 70
Query: 161 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 220
+ K+ + +G+ V ++MT +P+ + E L + L+ + +RLPVV
Sbjct: 71 FILGPGKSAAD----FVHEHGRKVSEVMTKSPLTITEDAALAEIVELMEKNHVKRLPVVK 126
Query: 221 ADGKLVGIITRGNVVRA 237
D ++VGI++R N+++A
Sbjct: 127 GD-QVVGIVSRANLLQA 142
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+MT + V T++ DAA ++L+ LPVVDA GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVTPDTSIVDAANIMLQRHVSGLPVVDAAGKLVGVVSEGDFIR 55
>gi|443318846|ref|ZP_21048089.1| chloride channel protein EriC [Leptolyngbya sp. PCC 6406]
gi|442781584|gb|ELR91681.1| chloride channel protein EriC [Leptolyngbya sp. PCC 6406]
Length = 868
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 85/214 (39%), Gaps = 48/214 (22%)
Query: 27 TSFALQLPCLLLSRPGCRVFSVLATSSDRVSALRRSSAVFASGTLTANSAAPSSGVY--- 83
T+F L LP ++ S C V +DRV+ + + A + N A + +
Sbjct: 392 TNFNLVLPLMIGSGLACLV-------ADRVTTGSLYNGLLAFKGIHLNPAPSENNPWAHL 444
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
T D M + E T +P AL+ GFPV+ KLVG+V+ DL
Sbjct: 445 TAADLMQRRVE-------TLTATMSIPEALDAFARSHHRGFPVLTQG-KLVGIVTQTDL- 495
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
EV T +T V D MTP PV V L
Sbjct: 496 ----------------AEVPQT------------RTAAYTVADFMTPRPVTVAPEAPLPQ 527
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
LL K RLPV D KLVGIITRG+++RA
Sbjct: 528 VLYLLNRLKVSRLPVTDGS-KLVGIITRGDIIRA 560
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
YTV DFMT + P T EA +P L +L +++ PV D KLVG+++ D+
Sbjct: 506 YTVADFMTPR-------PVTVAPEAPLPQVLYLLNRLKVSRLPVTDGS-KLVGIITRGDI 557
Query: 143 LALDSISGSGRADNSM 158
+ +S SG++ M
Sbjct: 558 IRAESEKISGQSSGRM 573
>gi|419847222|ref|ZP_14370405.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 1-6B]
gi|419855291|ref|ZP_14378051.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 44B]
gi|386411373|gb|EIJ26106.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 1-6B]
gi|386415756|gb|EIJ30278.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 44B]
Length = 683
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D++ S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVDADG+LVG+I R +V+ A
Sbjct: 652 PVVDADGRLVGVIRRKSVMEHAF 674
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 MKS 582
>gi|378827333|ref|YP_005190065.1| inosine-5'-monophosphate dehydrogenase IMP dehydrogenase; IMPDH;
IMPD [Sinorhizobium fredii HH103]
gi|365180385|emb|CCE97240.1| Inosine-5'-monophosphate dehydrogenase IMP dehydrogenase; IMPDH;
IMPD [Sinorhizobium fredii HH103]
Length = 259
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 70 TLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDD 129
L + A ++G+ D M K+ + K + E + A +++E RI+G PV D+
Sbjct: 23 NLLLRATAYAAGLKREFDTMLAKD-IMSKKVISVSPEYSISHAARMMLENRISGLPVCDN 81
Query: 130 DWKLVGLVSDYDLL---ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGD 186
KLVG++S+ DLL L S +G G+ + PE K + VGD
Sbjct: 82 SGKLVGILSEGDLLRRAELGSAAGRGQVSDRPEPEA-------------FIKGHSWRVGD 128
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+MT V V E L A ++ + +R+P V A G +VGII+R +++R
Sbjct: 129 VMTRPVVTVDEDVPLGRVAAIMAANEIKRIPAVRA-GAMVGIISRSDILR 177
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
D+M+ + V ++ AAR++LE + LPV D GKLVGI++ G+++R A
Sbjct: 46 DIMSKKVISVSPEYSISHAARMMLENRISGLPVCDNSGKLVGILSEGDLLRRA 98
>gi|452853043|ref|YP_007494727.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
gi|451896697|emb|CCH49576.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
Length = 224
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 17/139 (12%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A +++ +K I+ PV+D++ K+VG+VSD D+ D S P +T +E
Sbjct: 23 ASKLMKDKIISCVPVVDENGKIVGIVSDRDI-----------KDAS--PSKATTLD-MHE 68
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+ LLS+ + D+MT +RE +E AA L+LE ++ LPVVD + +VGIIT
Sbjct: 69 LYYLLSEIK---IKDIMTKKVTTIREDETVEKAAVLMLEGRFGSLPVVDENNVVVGIITD 125
Query: 232 GNVVRAALQIKHATEMGAQ 250
+V + ++I E G Q
Sbjct: 126 TDVFKVLVEISGIYEGGVQ 144
>gi|376295146|ref|YP_005166376.1| hypothetical protein DND132_0355 [Desulfovibrio desulfuricans
ND132]
gi|323457707|gb|EGB13572.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
ND132]
Length = 149
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 8/137 (5%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
E + A ++L+EK+I G PV+D D ++VG++ DL+A S F +D
Sbjct: 18 ETDITAAAKVLLEKKINGAPVLDGD-QVVGVLCQSDLVA----QQKKVTLPSFFTLLDGV 72
Query: 166 --WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 223
+ +E+ + ++K VGD MT AP V T +ED A ++ K LPV++ +G
Sbjct: 73 IPLSSHDELDREMTKIAALKVGDAMTAAPTFVTPETTIEDVATMMANEKLYTLPVIE-NG 131
Query: 224 KLVGIITRGNVVRAALQ 240
KLVG++ + +V++ ++
Sbjct: 132 KLVGVVGKEDVLKTLIK 148
>gi|160890575|ref|ZP_02071578.1| hypothetical protein BACUNI_03018 [Bacteroides uniformis ATCC 8492]
gi|317479883|ref|ZP_07939000.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_1_36]
gi|423304002|ref|ZP_17282001.1| inosine-5'-monophosphate dehydrogenase [Bacteroides uniformis
CL03T00C23]
gi|423307274|ref|ZP_17285264.1| inosine-5'-monophosphate dehydrogenase [Bacteroides uniformis
CL03T12C37]
gi|156859574|gb|EDO53005.1| inosine-5'-monophosphate dehydrogenase [Bacteroides uniformis ATCC
8492]
gi|316903957|gb|EFV25794.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_1_36]
gi|392685930|gb|EIY79238.1| inosine-5'-monophosphate dehydrogenase [Bacteroides uniformis
CL03T00C23]
gi|392690526|gb|EIY83789.1| inosine-5'-monophosphate dehydrogenase [Bacteroides uniformis
CL03T12C37]
Length = 491
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSTVADALALMAEYKIGGIPVVDDERYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + M +D ++++K N ++T P TT++E +++L E +
Sbjct: 144 RFEKDMNKRID----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHR 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD D KLVG+IT ++ +A
Sbjct: 183 IEKLPVVDKDNKLVGLITYKDITKA 207
>gi|323529296|ref|YP_004231448.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
gi|407710136|ref|YP_006794000.1| hypothetical protein BUPH_01568 [Burkholderia phenoliruptrix
BR3459a]
gi|323386298|gb|ADX58388.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
gi|407238819|gb|AFT89017.1| hypothetical protein BUPH_01568 [Burkholderia phenoliruptrix
BR3459a]
Length = 229
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MT K + V P T+ E + VE I+G PV+D D + G++S+ DLL
Sbjct: 5 DVMTGK--VISVTPDMTIREV-----ARLFVENHISGAPVLDSDGSVAGMISEGDLLRRS 57
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
I R S W +E + + KT+ V D+MT V V T L + A
Sbjct: 58 EIGTDERKRTSWL----DFWSASHEARDYV-KTHAAKVSDVMTTNVVTVGPDTPLGEVAG 112
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+L +R+PV A G+LVGI++R N+V+A
Sbjct: 113 VLETRHIKRVPVTKA-GRLVGIVSRANLVQA 142
>gi|270295712|ref|ZP_06201912.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D20]
gi|270273116|gb|EFA18978.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D20]
Length = 491
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSTVADALALMAEYKIGGIPVVDDERYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + M +D ++++K N ++T P TT++E +++L E +
Sbjct: 144 RFEKDMNKRID----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHR 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD D KLVG+IT ++ +A
Sbjct: 183 IEKLPVVDKDNKLVGLITYKDITKA 207
>gi|157363922|ref|YP_001470689.1| signal transduction protein [Thermotoga lettingae TMO]
gi|157314526|gb|ABV33625.1| putative signal transduction protein with CBS domains [Thermotoga
lettingae TMO]
Length = 148
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 76/140 (54%), Gaps = 9/140 (6%)
Query: 102 TTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF-P 160
T DE+ V L I+ + ++G PV+ +D +++G +S+ D++ S ++ F P
Sbjct: 14 VTKDES-VENVLRIMSSQLLSGIPVVSEDMRVIGFISESDIIRATVPSYFSLLQSASFIP 72
Query: 161 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 220
+++ + V+ K V + M+ P+VV E NL A +++ + +PVVD
Sbjct: 73 DMNQFLRNAKLVKD-------KPVFEYMSSPPIVVNEHANLIHVADIMIRHNIKVIPVVD 125
Query: 221 ADGKLVGIITRGNVVRAALQ 240
G+LVG+I R N+++AA++
Sbjct: 126 DLGRLVGMIGRTNILKAAME 145
>gi|419602027|ref|ZP_14136612.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 151-9]
gi|380581892|gb|EIB03600.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 151-9]
Length = 484
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 33/135 (24%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
++ P +A V ALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 93 IIDPIFVGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFEN 142
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRR 215
+V ++MT AP++ + L+DA ++ + K +
Sbjct: 143 DY----------------------SNLVENIMTKAPLITAPKGCTLDDAEKIFSKNKVEK 180
Query: 216 LPVVDADGKLVGIIT 230
LP+VD G+L G+IT
Sbjct: 181 LPIVDEQGRLEGLIT 195
>gi|419584401|ref|ZP_14120471.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 202/04]
gi|419592219|ref|ZP_14127518.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 37/05]
gi|380564195|gb|EIA87012.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 202/04]
gi|380566472|gb|EIA89108.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 37/05]
Length = 484
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 33/135 (24%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
++ P +A V ALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 93 IIDPIFVGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFEN 142
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRR 215
+V ++MT AP++ + L+DA ++ + K +
Sbjct: 143 DY----------------------SNLVENIMTKAPLITAPKGCTLDDAEKIFSKNKVEK 180
Query: 216 LPVVDADGKLVGIIT 230
LP+VD G+L G+IT
Sbjct: 181 LPIVDEQGRLEGLIT 195
>gi|290769657|gb|ADD61437.1| putative protein [uncultured organism]
Length = 491
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSTVADALALMAEYKIGGIPVVDDERYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + M +D ++++K N ++T P TT++E +++L E +
Sbjct: 144 RFEKDMNKRID----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHR 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD D KLVG+IT ++ +A
Sbjct: 183 IEKLPVVDKDNKLVGLITYKDITKA 207
>gi|254381637|ref|ZP_04997001.1| CBS [Streptomyces sp. Mg1]
gi|194340546|gb|EDX21512.1| CBS [Streptomyces sp. Mg1]
Length = 216
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 18/158 (11%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
YTV D MT VV T + + TA+E ++T PVI+ + ++VG+VS+ DL
Sbjct: 6 YTVNDVMTKT----VVTVTAAAEFKEIATAME---RWKVTAVPVIEGEGRVVGVVSEADL 58
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
L + G P + + + +K LMT V +R L
Sbjct: 59 LTKEEFHAQG-------PSLIEQMRRLGDT----AKAGSVRAEQLMTSPAVTIRPDATLP 107
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
AARL+ + +RLPVVDA+G L+GI++R ++++ L+
Sbjct: 108 RAARLMADRHIKRLPVVDANGTLLGIVSRADLLKVFLR 145
>gi|419556713|ref|ZP_14094691.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 84-2]
gi|419563606|ref|ZP_14101005.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1098]
gi|419576009|ref|ZP_14112680.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1909]
gi|419576676|ref|ZP_14113245.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 59-2]
gi|419581395|ref|ZP_14117697.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1957]
gi|419582858|ref|ZP_14119051.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1961]
gi|380534463|gb|EIA59253.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 84-2]
gi|380543720|gb|EIA67892.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1098]
gi|380552181|gb|EIA75747.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1909]
gi|380559368|gb|EIA82527.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 59-2]
gi|380559554|gb|EIA82706.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1957]
gi|380564432|gb|EIA87239.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1961]
Length = 484
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 33/135 (24%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
++ P +A V ALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 93 IIDPIFVGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFEN 142
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRR 215
+V ++MT AP++ + L+DA ++ + K +
Sbjct: 143 DY----------------------SNLVENIMTKAPLITAPKGCTLDDAEKIFSKNKVEK 180
Query: 216 LPVVDADGKLVGIIT 230
LP+VD G+L G+IT
Sbjct: 181 LPIVDEQGRLEGLIT 195
>gi|419541027|ref|ZP_14080250.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli Z163]
gi|419542397|ref|ZP_14081523.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2548]
gi|419548897|ref|ZP_14087509.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2685]
gi|419563363|ref|ZP_14100816.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1091]
gi|419566417|ref|ZP_14103677.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1148]
gi|419568949|ref|ZP_14106075.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1417]
gi|419574546|ref|ZP_14111276.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1891]
gi|419593635|ref|ZP_14128848.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
9854]
gi|419596153|ref|ZP_14131161.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23341]
gi|419598540|ref|ZP_14133420.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23342]
gi|419612673|ref|ZP_14146546.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli H9]
gi|419616952|ref|ZP_14150585.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli Z156]
gi|380515466|gb|EIA41630.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli Z163]
gi|380523246|gb|EIA48899.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2548]
gi|380526857|gb|EIA52285.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2685]
gi|380538304|gb|EIA62798.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1091]
gi|380544627|gb|EIA68645.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1417]
gi|380546649|gb|EIA70590.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1148]
gi|380549427|gb|EIA73252.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1891]
gi|380569738|gb|EIA92174.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
9854]
gi|380576762|gb|EIA98809.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23341]
gi|380577099|gb|EIA99132.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23342]
gi|380589839|gb|EIB10876.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli H9]
gi|380594641|gb|EIB15427.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli Z156]
Length = 484
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 33/135 (24%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
++ P +A V ALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 93 IIDPIFVGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFEN 142
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRR 215
+V ++MT AP++ + L+DA ++ + K +
Sbjct: 143 DY----------------------SNLVENIMTKAPLITAPKGCTLDDAEKIFSKNKVEK 180
Query: 216 LPVVDADGKLVGIIT 230
LP+VD G+L G+IT
Sbjct: 181 LPIVDEQGRLEGLIT 195
>gi|260909469|ref|ZP_05916173.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
472 str. F0295]
gi|260636394|gb|EEX54380.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
472 str. F0295]
Length = 494
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 43/173 (24%)
Query: 77 APSSGVYTVGDFMTTKEELH---VVK---------PTTTVDEAFVPTALEILVEKRITGF 124
A G+ + M+ +E+ H VVK P T V AL ++ + I G
Sbjct: 67 AREGGIGVIHKNMSIEEQAHEVAVVKRAENGMIYDPVTIRKGRTVKDALAMMHDYHIGGI 126
Query: 125 PVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 184
PV+DDD +LVG+V++ DL R ++ + ++D + N
Sbjct: 127 PVVDDDNRLVGIVTNRDL----------RFEHRLDKKIDEVMTSEN-------------- 162
Query: 185 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
VV + T+L AA++L E K +LPVVDA+ ++VG+IT ++ +A
Sbjct: 163 -------LVVTHQQTDLAAAAQILQENKIEKLPVVDANNRIVGLITYKDITKA 208
>gi|423226029|ref|ZP_17212495.1| inosine-5'-monophosphate dehydrogenase [Bacteroides
cellulosilyticus CL02T12C19]
gi|392630886|gb|EIY24867.1| inosine-5'-monophosphate dehydrogenase [Bacteroides
cellulosilyticus CL02T12C19]
Length = 491
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E RI G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSTVGDALALMAEYRIGGIPVVDDERYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R M +D ++++K N ++T P TT++E +++L E +
Sbjct: 144 RFVRDMNKHID----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHR 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD +GKLVG+IT ++ +A
Sbjct: 183 IEKLPVVDKEGKLVGLITYKDITKA 207
>gi|374984112|ref|YP_004959607.1| hypothetical protein SBI_01355 [Streptomyces bingchenggensis BCW-1]
gi|297154764|gb|ADI04476.1| hypothetical protein SBI_01355 [Streptomyces bingchenggensis BCW-1]
Length = 224
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 16/131 (12%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS---MFPEVDSTWKTF 169
+E+L E +T PV+D +G+VS+ DLL SG+AD S P +++ W+
Sbjct: 27 VELLAENDVTAVPVVDGSGHPIGVVSEADLLR----KSSGQADPSGRVPIPHLEA-WER- 80
Query: 170 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
+KT G +LM+ V R ++ +AARL+ +RLPVVD +L+GII
Sbjct: 81 -------AKTEGTRAEELMSAPAVCARPEWSVVEAARLMAVQGVKRLPVVDETDRLLGII 133
Query: 230 TRGNVVRAALQ 240
+R +++R L+
Sbjct: 134 SRADLLRIFLR 144
>gi|419554900|ref|ZP_14093023.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2698]
gi|380531653|gb|EIA56670.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2698]
Length = 484
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 33/135 (24%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
++ P +A V ALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 93 IIDPIFVGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFEN 142
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRR 215
+V ++MT AP++ + L+DA ++ + K +
Sbjct: 143 DY----------------------SNLVENIMTKAPLITAPKGCTLDDAEKIFSKNKVEK 180
Query: 216 LPVVDADGKLVGIIT 230
LP+VD G+L G+IT
Sbjct: 181 LPIVDEQGRLEGLIT 195
>gi|299142783|ref|ZP_07035912.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris C735]
gi|298575812|gb|EFI47689.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris C735]
Length = 494
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 43/173 (24%)
Query: 77 APSSGVYTVGDFMTTKEELH------------VVKPTTTVDEAFVPTALEILVEKRITGF 124
A G+ + M+ +E+ H + P T + V LE++ + I G
Sbjct: 67 AREGGIGVIHKNMSIEEQAHQVAIVKRAENGMIYDPVTIRRGSTVKDTLELMHDYHIGGI 126
Query: 125 PVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 184
PV+DDD KLVG+V++ DL R + M ++D ++++K N
Sbjct: 127 PVVDDDNKLVGIVTNRDL----------RFERRMDKKID----------EVMTKEN---- 162
Query: 185 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
V + T+L AA++L E K +LPVVD + +LVG+IT ++ +A
Sbjct: 163 -------LVTTHQQTDLVAAAQILQENKIEKLPVVDKNNRLVGLITYKDITKA 208
>gi|367472385|ref|ZP_09471968.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365275469|emb|CCD84436.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 242
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Query: 99 KPTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
+P TV + + A I++++ ++G PV+D KLVG+VS+ D + I G+GR
Sbjct: 9 RPVITVSPDTSIVDAANIMLQRHVSGLPVVDASGKLVGVVSEGDFIRRTEI-GTGRKRGR 67
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ K+ + +G+ V ++MT +P+ + E L + L+ + +RLP
Sbjct: 68 WLRFILGPGKSAAD----FVHEHGRKVSEVMTRSPLTITEDAALAEIVELMEKNHVKRLP 123
Query: 218 VVDADGKLVGIITRGNVVRA 237
VV D ++VGI++R N+++A
Sbjct: 124 VVKGD-QVVGIVSRANLLQA 142
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+MT + V T++ DAA ++L+ LPVVDA GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVSPDTSIVDAANIMLQRHVSGLPVVDASGKLVGVVSEGDFIR 55
>gi|170289451|ref|YP_001739689.1| CBS domain-containing protein [Thermotoga sp. RQ2]
gi|170176954|gb|ACB10006.1| CBS domain containing membrane protein [Thermotoga sp. RQ2]
Length = 215
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 25/157 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT P T E AL+++ + +I V+ D+ K+VG+V++ DLL
Sbjct: 3 VKDFMTRN-------PITIAPETSFSEALKLMKQNKIKRLIVMKDE-KIVGIVTEKDLLY 54
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ +A + W E+ LLSK + ++MT V V E T +EDA
Sbjct: 55 ----ASPSKATTL------NIW----ELHYLLSKLK---IEEIMTKDVVTVNENTPIEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
AR++ E LPVVD G LVGIIT+ ++ + ++I
Sbjct: 98 ARIMEEKDISGLPVVDDAGHLVGIITQTDIFKVFVEI 134
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+V D MT P+ + T+ +A +L+ + K +RL +V D K+VGI+T +++ A+
Sbjct: 2 LVKDFMTRNPITIAPETSFSEALKLMKQNKIKRL-IVMKDEKIVGIVTEKDLLYAS 56
>gi|189463688|ref|ZP_03012473.1| hypothetical protein BACINT_00019 [Bacteroides intestinalis DSM
17393]
gi|189438638|gb|EDV07623.1| inosine-5'-monophosphate dehydrogenase [Bacteroides intestinalis
DSM 17393]
Length = 491
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E RI G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSTVGDALALMAEYRIGGIPVVDDERYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R M +D ++++K N ++T P TT++E +++L E +
Sbjct: 144 RFVRDMNKHID----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHR 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD +GKLVG+IT ++ +A
Sbjct: 183 IEKLPVVDKEGKLVGLITYKDITKA 207
>gi|429726903|ref|ZP_19261688.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
473 str. F0040]
gi|429145343|gb|EKX88433.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
473 str. F0040]
Length = 493
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T V AL+++ E I G PV+DD+ +LVG+V++ DL
Sbjct: 96 ENGMIYDPITIKRGKTVREALDLMAEYHIGGIPVVDDEMRLVGIVTNRDL---------- 145
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R ++++ +D + N L TN TT+L A+ +L + K
Sbjct: 146 RFEHNLDKAIDEVMTSEN-----LVTTN----------------TTTDLVAASEILQKNK 184
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPV+DA+GKLVG+IT ++ +A
Sbjct: 185 IEKLPVIDANGKLVGLITYKDITKA 209
>gi|404450120|ref|ZP_11015106.1| hypothetical protein A33Q_12375 [Indibacter alkaliphilus LW1]
gi|403764319|gb|EJZ25224.1| hypothetical protein A33Q_12375 [Indibacter alkaliphilus LW1]
Length = 152
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 31/161 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D M+T L P ++D L++L +++I+G PVI+ D KLVG++S+ D
Sbjct: 22 VKDHMST--NLVTFYPEDSIDHV-----LDMLTKRKISGAPVINHDKKLVGIISEVD--C 72
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
L I ++ FP K M D++T +P +L DA
Sbjct: 73 LKEIIKGKYSNTPSFP----------------GKVEEHMTKDVITLSP-----EMSLFDA 111
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
A+ LE K RR PV+ DG+LVG I+ +++RA +++ T
Sbjct: 112 AQKFLELKIRRFPVL-KDGQLVGQISLSDIIRAFPKLRETT 151
>gi|33862790|ref|NP_894350.1| IMP dehydrogenase [Prochlorococcus marinus str. MIT 9313]
gi|33634706|emb|CAE20692.1| similar to IMP dehydrogenase [Prochlorococcus marinus str. MIT
9313]
Length = 146
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 15/144 (10%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG----R 153
V P T++ EA +++L + I+G PV++DD LVG +++ DL+ +S +G
Sbjct: 8 VVPATSLQEA-----VQLLSDHHISGLPVVNDDGTLVGELTEQDLMVRESGVDAGPYVLL 62
Query: 154 ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 213
D+ ++ W +V ++L G V DLM E L AA +L +
Sbjct: 63 LDSVIYLRNPLNWD--KQVHQVL----GTSVNDLMRSDTHTCNEALPLPRAAAMLHDRST 116
Query: 214 RRLPVVDADGKLVGIITRGNVVRA 237
+RL V++ KLVG+ITRG+VVRA
Sbjct: 117 QRLFVINDQRKLVGVITRGDVVRA 140
>gi|383786593|ref|YP_005471162.1| putative contains C-terminal CBS domains [Fervidobacterium
pennivorans DSM 9078]
gi|383109440|gb|AFG35043.1| putative transcriptional regulator, contains C-terminal CBS domains
[Fervidobacterium pennivorans DSM 9078]
Length = 313
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 41/165 (24%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
+V +FMT +++ VKP TV EIL KRI+G PV+DD+ +VG++S D+
Sbjct: 17 SVKEFMT--KDVIYVKPDRTV-----AQVKEILRLKRISGVPVVDDNNIVVGIISIEDI- 68
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ L + T + V + MT V + E L+D
Sbjct: 69 ----------------------------IKCLENGTLNESVNEHMTKNVVCLSEDATLQD 100
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
+ +Y R PVVDA GKLVGI+T+ +++ A AT +G
Sbjct: 101 VIKHFERYRYGRFPVVDAQGKLVGIVTKNDILAAV-----ATRLG 140
>gi|453051718|gb|EME99217.1| hypothetical protein H340_17457 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 229
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 21/159 (13%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV + MT + V+P T E ++ L E +T PV+D ++VG+VS+ DL+
Sbjct: 6 TVDELMTRN--VVRVRPDTPFKEI-----VKELAENDVTAVPVVDQGGRVVGVVSEADLM 58
Query: 144 --ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
+ D GR PE W+ +K G +LM+ PV R N+
Sbjct: 59 RKSADQPDPFGRVPVP-NPE---AWER--------AKAEGARAEELMSAPPVCARPEWNV 106
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+ ARL+ +RLPVVD +LVGII+R +V+R L+
Sbjct: 107 VETARLMSAQNVKRLPVVDETDRLVGIISRADVLRVFLR 145
>gi|284162397|ref|YP_003401020.1| hypothetical protein Arcpr_1296 [Archaeoglobus profundus DSM 5631]
gi|284012394|gb|ADB58347.1| CBS domain containing membrane protein [Archaeoglobus profundus DSM
5631]
Length = 259
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 42/161 (26%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MT + + + P TV++A + ++ E GFPV+D+D LVG VS DLL
Sbjct: 6 VKDYMT--KNVVTLSPENTVEDA-----IRLIEETGHDGFPVVDEDGMLVGYVSSIDLL- 57
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ D T K + D+M V +E L+D
Sbjct: 58 ----------------KKDPTMK----------------IKDIMKKEVHVAKEYMPLKDV 85
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
AR++ T + +LPVVD G+LVGII+ +V+R+ QI+ AT
Sbjct: 86 ARVMFRTGHSKLPVVDDRGRLVGIISNTDVIRS--QIERAT 124
>gi|392410785|ref|YP_006447392.1| CBS-domain-containing membrane protein [Desulfomonile tiedjei DSM
6799]
gi|390623921|gb|AFM25128.1| CBS-domain-containing membrane protein [Desulfomonile tiedjei DSM
6799]
Length = 149
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
+ D MT E+ V P T + E IL EKRI G PV+D+D ++G+V + DL+
Sbjct: 4 IADIMT--REVITVTPDTPIREL-----ARILAEKRINGVPVVDEDGTVLGVVCESDLIE 56
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
G ++F +DS N +QK + V ++ + V V +++
Sbjct: 57 ----QGRPLHIPTVFVILDSFIPLENPWRLQKEFKRITATKVEEIYSRPAVCVSPESDVS 112
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+AA+L+ E KY +PV D +LVG++ + +V+R
Sbjct: 113 EAAKLMSEKKYYTIPVCDDADRLVGVLGKVDVIRG 147
>gi|291456610|ref|ZP_06596000.1| lincomycin resistance protein LmrB [Bifidobacterium breve DSM 20213
= JCM 1192]
gi|417943311|ref|ZP_12586561.1| Lincomycin resistance protein LmrB [Bifidobacterium breve CECT
7263]
gi|291381887|gb|EFE89405.1| lincomycin resistance protein LmrB [Bifidobacterium breve DSM 20213
= JCM 1192]
gi|376165621|gb|EHS84569.1| Lincomycin resistance protein LmrB [Bifidobacterium breve CECT
7263]
Length = 692
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D+L S + ++
Sbjct: 545 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTV 600
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 601 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 660
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 661 PVVDGDGRLVGVIRRKSVMEHAF 683
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 529 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 588
Query: 235 VRA 237
+++
Sbjct: 589 LKS 591
>gi|148257031|ref|YP_001241616.1| hypothetical protein BBta_5760 [Bradyrhizobium sp. BTAi1]
gi|146409204|gb|ABQ37710.1| hypothetical protein BBta_5760 [Bradyrhizobium sp. BTAi1]
Length = 242
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 101 TTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 160
T T D + V A I++++ ++G PV+D KL+G+VS+ D + I G+GR
Sbjct: 13 TVTPDTSIVEAA-NIMLQRHVSGLPVVDASGKLIGVVSEGDFIRRTEI-GTGRKRGRWLR 70
Query: 161 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 220
+ K+ + +G+ V ++MT +P+ + E L + ++ + +RLPVV
Sbjct: 71 FILGPGKSAAD----FVHEHGRKVSEVMTKSPLTITEDAALAEIVEIMEKNHVKRLPVVK 126
Query: 221 ADGKLVGIITRGNVVRA 237
D ++VGI++R N+++A
Sbjct: 127 GD-QVVGIVSRANLLQA 142
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+MT + V T++ +AA ++L+ LPVVDA GKL+G+++ G+ +R
Sbjct: 6 IMTRPVITVTPDTSIVEAANIMLQRHVSGLPVVDASGKLIGVVSEGDFIR 55
>gi|317151879|ref|YP_004119927.1| hypothetical protein Daes_0154 [Desulfovibrio aespoeensis Aspo-2]
gi|316942130|gb|ADU61181.1| CBS domain containing protein [Desulfovibrio aespoeensis Aspo-2]
Length = 224
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 17/139 (12%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A +++ + I+ PV+D+ ++ G+VSD D+ D S P +T +E
Sbjct: 23 ASKLMKDHGISRLPVVDESGRIAGIVSDRDI-----------KDAS--PSKATTLD-MHE 68
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+ LLS+ + D+MT +R+ +E AA L+LE + LPVVD DGK+VGIIT
Sbjct: 69 LYYLLSEVK---IKDIMTKKVTTIRDDETVEKAAVLMLEGNFGGLPVVDGDGKVVGIITD 125
Query: 232 GNVVRAALQIKHATEMGAQ 250
++ + ++I E G Q
Sbjct: 126 TDIFKVLVEISGVYEGGVQ 144
>gi|296453971|ref|YP_003661114.1| EmrB/QacA subfamily drug resistance transporter [Bifidobacterium
longum subsp. longum JDM301]
gi|296183402|gb|ADH00284.1| drug resistance transporter, EmrB/QacA subfamily [Bifidobacterium
longum subsp. longum JDM301]
Length = 683
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D+L S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G++M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGEIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 LKS 582
>gi|225849786|ref|YP_002730020.1| inosine-5'-monophosphate dehydrogenase [Persephonella marina EX-H1]
gi|225645461|gb|ACO03647.1| inosine-5'-monophosphate dehydrogenase [Persephonella marina EX-H1]
Length = 489
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 31/141 (21%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
+ +P T + V ALEI+ +I+G PV+D + KL+G++++ DL
Sbjct: 96 ITEPVTIGPDQTVKEALEIMATYKISGVPVVDSENKLIGILTNRDL-------------- 141
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRR 215
+ L K K V MT AP++ +E T+LE+A +L + K +
Sbjct: 142 ----------------RFLHKKDYRKPVSQFMTKAPLITAKEGTSLEEAMDILQKHKVEK 185
Query: 216 LPVVDADGKLVGIITRGNVVR 236
LPVVD +G L G+IT ++V+
Sbjct: 186 LPVVDDEGHLKGLITIKDIVK 206
>gi|451337193|ref|ZP_21907741.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
gi|449420152|gb|EMD25654.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
Length = 201
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 99 KPTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
+P TV E A E+L E T PV+DDD +L+G+V++ DL+
Sbjct: 9 RPVVTVTPETTAKHAAEVLAEHGFTALPVVDDDERLIGIVTEADLI------------RD 56
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
FP+ + K Q G V ++MT + ++L + R LL+ + R +P
Sbjct: 57 RFPDDIRSAK-----QPSGQAAPGATVAEVMTTPVTGMSAGSDLAEVGRALLDGRIRAMP 111
Query: 218 VVDADGKLVGIITRGNVVRA 237
+VD K+VGI+TRG+ VRA
Sbjct: 112 IVDG-AKVVGILTRGDFVRA 130
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
DLMT V V T + AA +L E + LPVVD D +L+GI+T +++R
Sbjct: 5 DLMTRPVVTVTPETTAKHAAEVLAEHGFTALPVVDDDERLIGIVTEADLIR 55
>gi|46190448|ref|ZP_00121474.2| COG0477: Permeases of the major facilitator superfamily
[Bifidobacterium longum DJO10A]
gi|189439522|ref|YP_001954603.1| major facilitator superfamily permease [Bifidobacterium longum
DJO10A]
gi|189427957|gb|ACD98105.1| permease of the major facilitator superfamily [Bifidobacterium
longum DJO10A]
Length = 683
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D+L S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 LKS 582
>gi|312132929|ref|YP_004000268.1| permease of the major facilitator superfamily [Bifidobacterium
longum subsp. longum BBMN68]
gi|311773905|gb|ADQ03393.1| Permease of the major facilitator superfamily [Bifidobacterium
longum subsp. longum BBMN68]
Length = 683
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D+L S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G++M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGEIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 LKS 582
>gi|334341079|ref|YP_004546059.1| hypothetical protein [Desulfotomaculum ruminis DSM 2154]
gi|334092433|gb|AEG60773.1| CBS domain containing protein [Desulfotomaculum ruminis DSM 2154]
Length = 158
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 102 TTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 161
T +E V L++ VEK+++G PV+ D L G++++ D+L S + F
Sbjct: 14 TVREEEKVHDLLKVFVEKQVSGVPVVGKDHTLAGIITEADILRQIHQPPSFIDFVNYFVV 73
Query: 162 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 221
+DS ++ ++L++ V DLMT + V E T+L +++L K+++LPVVD
Sbjct: 74 LDSDRVITGQIMEMLNRP----VKDLMTKDVITVDEETSLAKISQILSRRKFKKLPVVDG 129
Query: 222 DGKLVGIITRGNVV 235
KLVG+I R +V+
Sbjct: 130 Q-KLVGVINRSDVI 142
>gi|167753424|ref|ZP_02425551.1| hypothetical protein ALIPUT_01698 [Alistipes putredinis DSM 17216]
gi|167658049|gb|EDS02179.1| inosine-5'-monophosphate dehydrogenase [Alistipes putredinis DSM
17216]
Length = 490
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 32/144 (22%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E +I G PV+ D L+G+V++ DL
Sbjct: 94 ENGMIYDPITISKDDTVGDALALMKENKIGGIPVVAPDQHLIGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R M ++D ++MT +V ++L+ AA +LL K
Sbjct: 144 RFQRDMNRKID----------------------EVMTKEGLVTTHNSDLQRAADILLRNK 181
Query: 213 YRRLPVVDADGKLVGIITRGNVVR 236
+LPVVDADGKLVG+IT ++ +
Sbjct: 182 IEKLPVVDADGKLVGLITYKDITK 205
>gi|435852150|ref|YP_007313736.1| CBS domain-containing protein [Methanomethylovorans hollandica DSM
15978]
gi|433662780|gb|AGB50206.1| CBS domain-containing protein [Methanomethylovorans hollandica DSM
15978]
Length = 157
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 13/157 (8%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D M T ++ V P TT+ EA ++L + I+G PV+++ ++VG+VS+ DLL
Sbjct: 3 VKDIMNT--DVIVCDPHTTISEAS-----QLLKKHNISGLPVVEEG-RVVGIVSEGDLLK 54
Query: 145 LDSI-SGSGRADNSMFPEVDSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
L + G S F ++ + + E + +L K V ++M ++ +
Sbjct: 55 LLEVPEHGGLWLPSPFEVIEIPIRELLNWEETKHMLDDIGSKPVSEIMQKNVHLISPENS 114
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
++DA RL+ + K RLPVV+ D LVGIITRG+++
Sbjct: 115 IQDAVRLITKHKVNRLPVVEDD-ILVGIITRGDIIHG 150
>gi|412986258|emb|CCO17458.1| inosine-5'-monophosphate dehydrogenase [Bathycoccus prasinos]
Length = 399
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 92/222 (41%), Gaps = 56/222 (25%)
Query: 42 GCRVFSVLATSSDRVSAL---------------RRSSAVFASGTLTANSAAPSSGVYTVG 86
G R F V ++SSD + R SA A ++ AA S V
Sbjct: 29 GQRAFKVFSSSSDNETTFEGGEKEIGKLHLDGGRSMSASKAEDPDMSDEAAISWPYSRVE 88
Query: 87 DFMTTKEE--LHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
+FMT E +K T ++F+ KR G PV+D+D LVG++S D+
Sbjct: 89 EFMTKDPETLCESLKLTDVKVKSFI---------KRYHGGPVVDEDGNLVGVISRNDVKR 139
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
L IS F E Q+ + + V D MT P+ V + A
Sbjct: 140 LSYIS-------------------FGEEQRHI-----RTVADAMTSMPLTVGPKAYISAA 175
Query: 205 ARLLLETKYRRLPVVDAD------GKLVGIITRGNVVRAALQ 240
A L+L+ K RLPVV+ GKL+GIITR ++ +Q
Sbjct: 176 AGLMLKHKIHRLPVVEEGEDYAHPGKLIGIITRSDIWEPLIQ 217
>gi|116249467|ref|YP_765305.1| hypothetical protein pRL90009 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254115|emb|CAK03717.1| conserved CBS domain hypothetical protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 226
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A+ ++++ ++G PVIDD+ ++ GL+++ DLL I + RA + PE+ S +
Sbjct: 23 AVAVMMQNNVSGLPVIDDEGRVCGLLTEGDLLLRREIRFAPRA--ARAPEIISEI----D 76
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+++ +S +NG V D+M+ +V + + D A L + +RLP+V+ DG+LVGI++R
Sbjct: 77 LERYIS-SNGWCVADVMSQDVIVASPDSEVSDIAESLQAHRIKRLPIVE-DGRLVGIVSR 134
Query: 232 GNVV 235
+++
Sbjct: 135 RDIL 138
>gi|119717867|ref|YP_924832.1| inosine-5'-monophosphate dehydrogenase [Nocardioides sp. JS614]
gi|119538528|gb|ABL83145.1| inosine-5'-monophosphate dehydrogenase [Nocardioides sp. JS614]
Length = 500
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 31/154 (20%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
+ P T +A + ++ E RI+GFPV+D D +L+G++++ DL
Sbjct: 97 ISNPVTIGPDATLEQLDQLAGEYRISGFPVVDADNRLLGIITNRDL-------------- 142
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRR 215
F V + W T V ++MTP P++ + EDA LL + K R
Sbjct: 143 -RFTPV-AEWATTK-------------VDEVMTPMPLITAPPDISREDATLLLRQHKRER 187
Query: 216 LPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 249
LP+VDA G+L G+IT + V++ Q HA++ GA
Sbjct: 188 LPLVDAQGRLAGLITVKDFVKSE-QFPHASKDGA 220
>gi|27381185|ref|NP_772714.1| hypothetical protein blr6074 [Bradyrhizobium japonicum USDA 110]
gi|27354352|dbj|BAC51339.1| blr6074 [Bradyrhizobium japonicum USDA 110]
Length = 242
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 11/140 (7%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P T++ EA I++++ ++G V+DD KLVG+VS+ D + I G+GR
Sbjct: 14 VTPDTSIVEA-----ANIMLKRHVSGLTVVDDTGKLVGVVSEGDFIRRSEI-GTGRKRGR 67
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ K+ ++ +G+ V ++MT +PV + E T L + L+ +RLP
Sbjct: 68 WLRFILGPGKSASD----FVHEHGRKVSEVMTASPVTITEDTALAEIVDLMERNNVKRLP 123
Query: 218 VVDADGKLVGIITRGNVVRA 237
VV D +VGI++R N+++A
Sbjct: 124 VVRGD-MVVGIVSRANLLQA 142
>gi|427385456|ref|ZP_18881763.1| inosine-5'-monophosphate dehydrogenase [Bacteroides oleiciplenus
YIT 12058]
gi|425727100|gb|EKU89961.1| inosine-5'-monophosphate dehydrogenase [Bacteroides oleiciplenus
YIT 12058]
Length = 491
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E RI G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSTVGDALALMAEYRIGGIPVVDDEKYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R M +D ++++K N ++T P TT++E +++L E +
Sbjct: 144 RFVRDMDKHID----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHR 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD +GKLVG+IT ++ +A
Sbjct: 183 IEKLPVVDKEGKLVGLITYKDITKA 207
>gi|336323781|ref|YP_004603748.1| hypothetical protein Flexsi_1530 [Flexistipes sinusarabici DSM
4947]
gi|336107362|gb|AEI15180.1| CBS domain containing protein [Flexistipes sinusarabici DSM 4947]
Length = 214
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 24/145 (16%)
Query: 100 PTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P TV+ + F+P +E++ E I PV+D D KLVG++SD ++
Sbjct: 10 PAVTVNKDEFLPKVIELMKENDIRHVPVMDGD-KLVGIISDRNI-------------KDY 55
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGK--MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
P +T F E+ L+ K M +++T P T +EDAA+LL + K L
Sbjct: 56 LPSSSTTLDVF-EIHYLIGKVKASKIMKKNVITAEPY-----TPIEDAAKLLYDNKISAL 109
Query: 217 PVVDADGKLVGIITRGNVVRAALQI 241
P++D DG LVG++T +V RA + I
Sbjct: 110 PILD-DGLLVGVVTDRDVYRALISI 133
>gi|456386465|gb|EMF52001.1| hypothetical protein SBD_6523 [Streptomyces bottropensis ATCC
25435]
Length = 242
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 82 VYTVGDFMTTKE-ELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDY 140
++TVGD MT + + H P V + +L RI+G PV+D D K+VG+VS
Sbjct: 9 IHTVGDVMTDEVVQAHRETPFKDV--------VRLLDAHRISGMPVVDHDDKVVGVVSGT 60
Query: 141 DLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
DL+ + GR D + + + G+LM+ + V
Sbjct: 61 DLVRGQAARADGRLDRRH-----RMPRLRRPGHRAAAGVFATTAGELMSTPAITVHPEQP 115
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+ +AAR++ RLPVVD + +L+GI TR +++R L+
Sbjct: 116 VPEAARVMERHGIERLPVVDEEDRLIGIATRRDLLRVFLR 155
>gi|395777163|ref|ZP_10457678.1| putative CBS domain-containing protein [Streptomyces acidiscabies
84-104]
Length = 221
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 15/130 (11%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
+ ++ E R++ PV + + ++VG+VS+ DLL + D + ++
Sbjct: 29 VRLMREWRVSALPVTEGEDRVVGVVSEADLLCKEEFR-------------DDDPDRYTQL 75
Query: 173 QKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
++L L K G DLMT + VR T L AAR++ +RLPVVDA G+L GI++
Sbjct: 76 RRLRDLEKAGGVRARDLMTSPALSVRADTTLAQAARVMARASVKRLPVVDALGRLEGIVS 135
Query: 231 RGNVVRAALQ 240
R ++++ L+
Sbjct: 136 RADLLKVFLR 145
>gi|384197111|ref|YP_005582855.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium breve ACS-071-V-Sch8b]
gi|333109832|gb|AEF26848.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium breve ACS-071-V-Sch8b]
Length = 683
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D+L S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDNQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 LKS 582
>gi|389696309|ref|ZP_10183951.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
gi|388585115|gb|EIM25410.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
Length = 231
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 78/140 (55%), Gaps = 11/140 (7%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V+P+TT+ EA ++++ RI+G PV D LVG++S+ DLL + G+ R S
Sbjct: 14 VEPSTTIAEAA-----KLMLADRISGLPVTMRDGTLVGMLSEGDLLRRGEL-GTERKRPS 67
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ + K +E +++G+ V +M+ PV R +E+ + + +RLP
Sbjct: 68 WLEFLIGSGKLADE----YVRSHGRKVEQVMSTDPVTTRRDAPIEEIVTAMDRHRIKRLP 123
Query: 218 VVDADGKLVGIITRGNVVRA 237
V+D +GK+VGI+ R +V+RA
Sbjct: 124 VID-NGKVVGIVARSDVLRA 142
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V D+MT + V +T + +AA+L+L + LPV DG LVG+++ G+++R
Sbjct: 2 IVEDVMTAPVISVEPSTTIAEAAKLMLADRISGLPVTMRDGTLVGMLSEGDLLR 55
>gi|424887354|ref|ZP_18310959.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393175126|gb|EJC75169.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 240
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 75/132 (56%), Gaps = 6/132 (4%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V A +++++ RI+G PV+D + LVG+VS+ D L ++ + R + + + S
Sbjct: 20 VAEAAKLMLDNRISGLPVVDANGTLVGIVSEGDFLRRSELN-TERKRSWLLEWLASPRTI 78
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+E +T+G+ V ++MT + T + +A RL+ +RLPVV A+G+LVGI
Sbjct: 79 ADE----YVRTHGRRVEEVMTSPVSAIAPTAAISEAVRLMERRDIKRLPVV-AEGRLVGI 133
Query: 229 ITRGNVVRAALQ 240
+ R +++RA Q
Sbjct: 134 LARSDLLRALSQ 145
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 38/54 (70%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V +MT + V +T++ +AA+L+L+ + LPVVDA+G LVGI++ G+ +R
Sbjct: 2 LVQTIMTSPAITVTASTSVAEAAKLMLDNRISGLPVVDANGTLVGIVSEGDFLR 55
>gi|146342162|ref|YP_001207210.1| hypothetical protein BRADO5312 [Bradyrhizobium sp. ORS 278]
gi|146194968|emb|CAL78993.1| conserved hypothetical protein with CBS domain [Bradyrhizobium sp.
ORS 278]
Length = 242
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 101 TTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 160
T T D + V A I++++ ++G PV+D KLVG+VS+ D + I G+GR
Sbjct: 13 TVTPDTSIVDAA-NIMLQRHVSGLPVVDASGKLVGVVSEGDFIRRTEI-GTGRKRGRWLR 70
Query: 161 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 220
+ K+ + +G+ V ++MT +P+ + E L + ++ + +RLPVV
Sbjct: 71 FILGPGKSAAD----FVHEHGRKVSEVMTRSPLTITEDAALAEIVEIMEKNHVKRLPVVK 126
Query: 221 ADGKLVGIITRGNVVRA 237
D ++VGI++R N+++A
Sbjct: 127 GD-QVVGIVSRANLLQA 142
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+MT + V T++ DAA ++L+ LPVVDA GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVTPDTSIVDAANIMLQRHVSGLPVVDASGKLVGVVSEGDFIR 55
>gi|254380661|ref|ZP_04996027.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194339572|gb|EDX20538.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 216
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 14/144 (9%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
VV T T + + TA+E ++T PV++ + ++VG+VS+ DLL + +
Sbjct: 5 VVAVTPTAEFKEIVTAIE---RWKVTALPVVEGEGRVVGVVSEADLLPKEEF-------H 54
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
P + + + SK DLMT V V + L ARL+ E +RL
Sbjct: 55 EHRPGMIEHMRRLADT----SKAGSTCAEDLMTTPAVTVHPSATLPQVARLMAERHIKRL 110
Query: 217 PVVDADGKLVGIITRGNVVRAALQ 240
PVVDADG L GI++R ++++ L+
Sbjct: 111 PVVDADGTLKGIVSRADLLKVFLR 134
>gi|374636727|ref|ZP_09708281.1| putative signal transduction protein with CBS domains
[Methanotorris formicicus Mc-S-70]
gi|373558019|gb|EHP84386.1| putative signal transduction protein with CBS domains
[Methanotorris formicicus Mc-S-70]
Length = 153
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 13/128 (10%)
Query: 118 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE--------VDSTWKTF 169
E +I+G PV++D +LVG++S+ D++ +I+ + + P + +T K
Sbjct: 29 EHKISGAPVVED-GELVGIISESDIVK--TITTHNESIGLILPSPLDLIELPLRTTLK-I 84
Query: 170 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
E ++ + K V D+MT +V+ + +AA+L++E +RLPVV DGKLVGI+
Sbjct: 85 EEFKEDIKKALKTKVKDVMTRDVIVISPDEGINNAAKLMIENNIKRLPVV-KDGKLVGIV 143
Query: 230 TRGNVVRA 237
TRG+++ A
Sbjct: 144 TRGDIIEA 151
>gi|225352070|ref|ZP_03743093.1| hypothetical protein BIFPSEUDO_03679 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157317|gb|EEG70656.1| hypothetical protein BIFPSEUDO_03679 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 330
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 35/181 (19%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDW 131
+A P+ V TV D M + +++ T +A V A+ +++EK I+G P++DD+
Sbjct: 166 SAQQHVPALDVKTVADVM--QHDVY-----TVASDAEVRDAVRMMLEKNISGMPIVDDER 218
Query: 132 KLVGLVSDYDLL---ALDS---------ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 179
+VG +SD D+L A D+ ++G R + FPE+ V + +K
Sbjct: 219 HVVGFISDSDVLRRFAQDNAPVSDISTLVTGMARGE---FPELSHAELLDMNVMVIAAK- 274
Query: 180 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
PA V V+ N+ ++ +Y+++PVV+ GKLVG++ RG + R +
Sbjct: 275 ----------PA-VTVQSDANIAQVCQMFGYQQYKKVPVVE-QGKLVGVVNRGRLTRRSF 322
Query: 240 Q 240
+
Sbjct: 323 E 323
>gi|269126276|ref|YP_003299646.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
43183]
gi|268311234|gb|ACY97608.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
43183]
Length = 227
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
+E++ E RI PV+D D +++G+VS+ DLL G R + + +
Sbjct: 27 VELIEEHRIDAVPVVDADRRVIGIVSESDLLHKQEFGGPRRTPSGLLGALRR-------- 78
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
++ +K LMT + V +AAR++ K +LPV D DG+LVGI+ R
Sbjct: 79 RRAQAKAGAVNARGLMTTPVITVSPQATAAEAARIMARHKVDQLPVTDDDGRLVGIVARS 138
Query: 233 NVVRAALQ 240
+V+R L+
Sbjct: 139 DVLRVFLR 146
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 180 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
G+ V +LMT V VR T + L+ E + +PVVDAD +++GI++ +++
Sbjct: 2 KGRRVQELMTENVVSVRAETPFVEIVELIEEHRIDAVPVVDADRRVIGIVSESDLL---- 57
Query: 240 QIKHATEMGA 249
H E G
Sbjct: 58 ---HKQEFGG 64
>gi|340618834|ref|YP_004737287.1| inosine-5'-monophosphate dehydrogenase [Zobellia galactanivorans]
gi|339733631|emb|CAZ97008.1| Inosine-5'-monophosphate dehydrogenase [Zobellia galactanivorans]
Length = 490
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 33/135 (24%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
++ P T +FV A + E I G P++DD+ KL+G+V++ DL
Sbjct: 98 IIDPVTLPLNSFVRDAKANMKEYSIGGIPIVDDEGKLIGIVTNRDLR------------- 144
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRR 215
K N + + ++MT +V V E T+LE A +L E K +
Sbjct: 145 -------------------FEKNNDRPISEVMTSKNLVTVSEGTSLEQAEDILQENKIEK 185
Query: 216 LPVVDADGKLVGIIT 230
LPVVD D KLVG+IT
Sbjct: 186 LPVVDKDNKLVGLIT 200
>gi|53715359|ref|YP_101351.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis YCH46]
gi|60683328|ref|YP_213472.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis NCTC
9343]
gi|265767846|ref|ZP_06095378.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_16]
gi|375360136|ref|YP_005112908.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
fragilis 638R]
gi|383119913|ref|ZP_09940650.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_2_5]
gi|423252208|ref|ZP_17233210.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL03T00C08]
gi|423252528|ref|ZP_17233459.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL03T12C07]
gi|423261244|ref|ZP_17242145.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL07T00C01]
gi|423267769|ref|ZP_17246749.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL07T12C05]
gi|423272322|ref|ZP_17251290.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL05T00C42]
gi|423276778|ref|ZP_17255710.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL05T12C13]
gi|52218224|dbj|BAD50817.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis YCH46]
gi|60494762|emb|CAH09568.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
fragilis NCTC 9343]
gi|251944079|gb|EES84598.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_2_5]
gi|263252518|gb|EEZ24046.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_16]
gi|301164817|emb|CBW24377.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
fragilis 638R]
gi|387774396|gb|EIK36508.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL07T00C01]
gi|392647820|gb|EIY41517.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL03T00C08]
gi|392660604|gb|EIY54213.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL03T12C07]
gi|392695514|gb|EIY88726.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL05T00C42]
gi|392695990|gb|EIY89194.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL05T12C13]
gi|392696028|gb|EIY89230.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL07T12C05]
Length = 491
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + +M +D ++++K N V ++T+LE A+++L K
Sbjct: 144 RFERNMDKRID----------EVMTKEN-----------LVTTNQSTDLEAASQILQYHK 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD +GKL+G++T ++ +A
Sbjct: 183 IEKLPVVDKEGKLIGLVTYKDITKA 207
>gi|424875673|ref|ZP_18299332.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393163276|gb|EJC63329.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 226
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A+ ++++ ++G PVIDD+ ++ G++++ DLL I + RA + PE+ S +
Sbjct: 23 AVAVMMQNNVSGLPVIDDEGRVCGMLTEGDLLLRKEIRFAPRA--ARAPEIISEI----D 76
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+++ +S +NG V D+M+ +V + + D A L + +RLP+V+ DG+LVGI++R
Sbjct: 77 LERYIS-SNGWCVADVMSQDVIVASPDSEVSDIAESLQAHRIKRLPIVE-DGRLVGIVSR 134
Query: 232 GNVV 235
+++
Sbjct: 135 RDIL 138
>gi|336412095|ref|ZP_08592553.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_56FAA]
gi|335939267|gb|EGN01144.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_56FAA]
Length = 491
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + +M +D ++++K N V ++T+LE A+++L K
Sbjct: 144 RFERNMDKRID----------EVMTKEN-----------LVTTNQSTDLEAASQILQYHK 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD +GKL+G++T ++ +A
Sbjct: 183 IEKLPVVDKEGKLIGLVTYKDITKA 207
>gi|114706239|ref|ZP_01439141.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
gi|114538100|gb|EAU41222.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
Length = 144
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 26/123 (21%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
++L EKRI +++D+ +L G+VS+ D++ + + G P+V +
Sbjct: 28 QVLSEKRIGAIILVEDNGRLAGIVSERDIVRVVAARG---------PDVLT--------- 69
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
++V + MTP V VRE ++++A RL+ E ++R LPVVD +LVG ++ G+
Sbjct: 70 --------QLVKEAMTPKVVTVREDMSIDEAMRLMTEKRFRHLPVVDETEQLVGFVSIGD 121
Query: 234 VVR 236
VV+
Sbjct: 122 VVK 124
>gi|423283056|ref|ZP_17261941.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
615]
gi|404581330|gb|EKA86029.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
615]
Length = 491
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + +M +D ++++K N V ++T+LE A+++L K
Sbjct: 144 RFERNMDKRID----------EVMTKEN-----------LVTTNQSTDLEAASQILQYHK 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD +GKL+G++T ++ +A
Sbjct: 183 IEKLPVVDKEGKLIGLVTYKDITKA 207
>gi|229817773|ref|ZP_04448055.1| hypothetical protein BIFANG_03045 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785562|gb|EEP21676.1| hypothetical protein BIFANG_03045 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 683
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D+L SI+ ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVL--KSIA---TYESRT 590
Query: 159 FPE-VDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 215
P ST F++ V + +GK V D+ T V ++ + AR+L + ++++
Sbjct: 591 VPTGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKK 650
Query: 216 LPVVDADGKLVGIITRGNVVRAAL 239
LPVVD DG+LVG+I R +V+ A
Sbjct: 651 LPVVDGDGRLVGVIRRKSVMEHAF 674
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 LKS 582
>gi|452853189|ref|YP_007494873.1| CBS domain containing protein [Desulfovibrio piezophilus]
gi|451896843|emb|CCH49722.1| CBS domain containing protein [Desulfovibrio piezophilus]
Length = 222
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 17/128 (13%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V A EIL EK I FPVID+ +LVG+VSD D+ A S F D+ +
Sbjct: 20 VMDAAEILREKNIRQFPVIDNKARLVGIVSDRDIR---------DAMPSKFLPGDAVCER 70
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ L + GD+MT P+ V T +++ A +L++ K LPVVD G+L+GI
Sbjct: 71 GGGLYTLTA-------GDIMTLDPITVPSDTAVDEVANILVQHKVGGLPVVDG-GELMGI 122
Query: 229 ITRGNVVR 236
IT+ +V+R
Sbjct: 123 ITQADVLR 130
>gi|298241060|ref|ZP_06964867.1| putative signal transduction protein with CBS domains
[Ktedonobacter racemifer DSM 44963]
gi|297554114|gb|EFH87978.1| putative signal transduction protein with CBS domains
[Ktedonobacter racemifer DSM 44963]
Length = 155
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 35/126 (27%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A +L E +I+G PV++ D +VG+V+++D++A
Sbjct: 23 AAHLLSEYKISGMPVVNSDNVIVGIVTEFDVIA--------------------------- 55
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
G++V D+MT + + V E T LE+ +R+L+ + RRL VV + G+LVGII+R
Sbjct: 56 -------RKGQLVRDIMTRSVITVSEETELEEVSRILVHERIRRLLVV-SRGRLVGIISR 107
Query: 232 GNVVRA 237
++V+A
Sbjct: 108 VDLVKA 113
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
V ++MT +VV E ++ AA LL E K +PVV++D +VGI+T +V+
Sbjct: 3 VRNVMTRDVIVVNEDQTMQQAAHLLSEYKISGMPVVNSDNVIVGIVTEFDVI 54
>gi|119026509|ref|YP_910354.1| efflux transporter protein [Bifidobacterium adolescentis ATCC
15703]
gi|118766093|dbj|BAF40272.1| possible efflux transporter protein [Bifidobacterium adolescentis
ATCC 15703]
Length = 692
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D++ S + ++
Sbjct: 545 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 600
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 601 STGTGSTMVVFDDETVASKVQALSGKKVMDIATHKVVAATPDQHVGEVARILAKKQFKKL 660
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 661 PVVDGDGRLVGVIRRKSVMEHAF 683
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 529 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 588
Query: 235 VRA 237
+++
Sbjct: 589 MKS 591
>gi|381210106|ref|ZP_09917177.1| CBS domain containing membrane protein [Lentibacillus sp. Grbi]
Length = 155
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAF-VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
+ DFM T +V E + L+ LVE +I G PV+D++ +L+G++SD D++
Sbjct: 3 IQDFMIT--------DVISVQEDIKIKDLLKTLVEHKIGGVPVVDENARLIGMISDGDVI 54
Query: 144 ALDSISGSGRADNSMFPEVDSTWKT--FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
+ GR F V T K N+++ + + ++V V +
Sbjct: 55 RY--LQPDGRTIYDAFSMVFITEKEGLRNKIETSIEHHSSEIV----KKNVYAVHPDDEI 108
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
E+A LL ++++PVVDA K+VG+++RG+++R+
Sbjct: 109 EEALSLLSRYHFKKIPVVDASNKVVGVVSRGDIIRSV 145
>gi|302549200|ref|ZP_07301542.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
gi|302466818|gb|EFL29911.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
Length = 234
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 4/126 (3%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
+L E RI+G PV+DDD K++G++S+ DL+A + + +F T + +
Sbjct: 20 LLAEHRISGLPVVDDDEKVLGVISETDLMARQAEAPGPSGPRRLFRRPRWTPGSRARQAR 79
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
++T G+ LM+ + V + +AAR++ + RLPVVD + +LVGI+TR ++
Sbjct: 80 AHARTAGQ----LMSRPAITVHGDASAVEAARVMAHHRVERLPVVDDEERLVGIVTRRDL 135
Query: 235 VRAALQ 240
++ L+
Sbjct: 136 LQVFLR 141
>gi|298291193|ref|YP_003693132.1| hypothetical protein Snov_1194 [Starkeya novella DSM 506]
gi|296927704|gb|ADH88513.1| CBS domain containing membrane protein [Starkeya novella DSM 506]
Length = 228
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 175
L+E+RI+G P++DD K+VG+VS+ DL+ R + VD +
Sbjct: 27 LLERRISGMPIVDDKGKMVGIVSEGDLIRRAEAGTERRRSWWLQAFVDD-----GTLAAE 81
Query: 176 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K +G+ D+M PV T L + A L+ +R+P+V+ G LVGI++R N++
Sbjct: 82 YVKAHGRTAADVMHRDPVTAGPDTPLHEIAALMESHGVKRIPIVEK-GHLVGIVSRSNLI 140
Query: 236 RAALQIKHATEM 247
+A K E+
Sbjct: 141 QAVAGTKMGLEI 152
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 186 DLMTPAPVVVRETTNLE-DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
D+MT +PV+ +TT+L A+ LLE + +P+VD GK+VGI++ G+++R A
Sbjct: 5 DVMT-SPVITAKTTDLVVQIAKTLLERRISGMPIVDDKGKMVGIVSEGDLIRRA 57
>gi|440699107|ref|ZP_20881412.1| CBS domain protein [Streptomyces turgidiscabies Car8]
gi|440278413|gb|ELP66451.1| CBS domain protein [Streptomyces turgidiscabies Car8]
Length = 221
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 71/130 (54%), Gaps = 15/130 (11%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
++++ + +++ PV++ + +++G+VS+ DLL + DS F ++
Sbjct: 29 VKLMEQWKVSALPVLEGEGRVIGVVSEADLLPKEEFR-------------DSDPDRFTQL 75
Query: 173 QKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+L L+K G DLM + V L AAR++ + K +RLPVV+A+G L G+++
Sbjct: 76 SRLSDLAKAGGLTAADLMNAPAITVHADATLAQAARIMAQRKVKRLPVVNAEGLLEGVVS 135
Query: 231 RGNVVRAALQ 240
R ++++ L+
Sbjct: 136 RADLLKVFLR 145
>gi|170741730|ref|YP_001770385.1| hypothetical protein M446_3570 [Methylobacterium sp. 4-46]
gi|168196004|gb|ACA17951.1| CBS domain containing membrane protein [Methylobacterium sp. 4-46]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 14/130 (10%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF-- 169
A +++EKRI+G P++D +LVG+V++ DL+A I G+ R + W +
Sbjct: 23 AAALMLEKRISGLPILDAAGRLVGIVTEGDLVARREI-GTARPHPA--------WIRYLL 73
Query: 170 --NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 227
+ ++ G VGD MT V T L+D L+ + RR+P+V+ DG+LVG
Sbjct: 74 SPGRLAAAYARECGHRVGDAMTREVVTASPETPLDDIVGLMARRRIRRVPIVE-DGRLVG 132
Query: 228 IITRGNVVRA 237
I+TR +++RA
Sbjct: 133 IVTRADLLRA 142
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
++MT R +LE AA L+LE + LP++DA G+LVGI+T G++V
Sbjct: 5 EIMTTQVTCGRADLSLELAAALMLEKRISGLPILDAAGRLVGIVTEGDLV 54
>gi|325001432|ref|ZP_08122544.1| predicted signal-transduction protein containing cAMP-binding and
CBS domains [Pseudonocardia sp. P1]
Length = 282
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 71/151 (47%), Gaps = 32/151 (21%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MT L V P +DEA E+L+ R T PV+DDD +L+G+VS+ DL+A
Sbjct: 164 VSDVMTDGG-LVAVPPGLALDEAA-----EVLLSYRYTAVPVVDDDDRLLGVVSEADLMA 217
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
T+ + S G M D+ T P L DA
Sbjct: 218 ---------------------GSTYGGRRTRASTVAGVMTYDVETVHP-----GDPLADA 251
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
+LL E +R +PVVD DG LVG+I+R +++
Sbjct: 252 EQLLAERGFRVIPVVDDDGVLVGVISRSDLL 282
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 33/127 (25%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A E + E R + PV+D + LVG++S D+L R D +
Sbjct: 25 AQERMAEARFSALPVVDRRFSLVGVISLVDVL-------RHRDDPN-------------- 63
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA-RLLLETKYRRLPVVDADGKLVGIIT 230
VGD MT V V+ TT++ A R+ + + R +PVV G L+G+IT
Sbjct: 64 ----------ATVGDAMTEQVVTVQATTSVSIVAHRMRVYGELRLVPVVQR-GGLLGVIT 112
Query: 231 RGNVVRA 237
R +++RA
Sbjct: 113 RSDLLRA 119
>gi|298674758|ref|YP_003726508.1| hypothetical protein Metev_0814 [Methanohalobium evestigatum
Z-7303]
gi|298287746|gb|ADI73712.1| CBS domain containing membrane protein [Methanohalobium evestigatum
Z-7303]
Length = 155
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI-SGSGRADNSMFPEVDSTWKTF--- 169
+IL + I+G PV+DD +VG++S+ DLL I G S F ++ + F
Sbjct: 25 QILKKNGISGVPVVDDKNNIVGVISEEDLLRFLEIPDHRGLWLPSPFEVIEIPIREFVSW 84
Query: 170 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
E + +LS K V +M + + +E A++L+ + K RLPV++ DGKL+GI+
Sbjct: 85 EETKHMLSDFGDKKVQQVMKTDVLTITPEDTIEYASQLMTKHKINRLPVIE-DGKLIGIV 143
Query: 230 TRGNVVRA 237
TRG+++
Sbjct: 144 TRGDIIEG 151
>gi|15643592|ref|NP_228638.1| hypothetical protein TM0829 [Thermotoga maritima MSB8]
gi|418045001|ref|ZP_12683097.1| CBS domain containing membrane protein [Thermotoga maritima MSB8]
gi|4981361|gb|AAD35911.1|AE001750_5 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351678083|gb|EHA61230.1| CBS domain containing membrane protein [Thermotoga maritima MSB8]
Length = 150
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTWK 167
V T +++L + ++G PV+D D ++VG VS+ DL+ AL S S P+
Sbjct: 20 VETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDT----- 74
Query: 168 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 227
N++ + + K + V + M PVVV+E L AA L+ ++ LPVVD +LVG
Sbjct: 75 --NQLIRNVVKIKDRPVSEFMNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDEAMQLVG 132
Query: 228 IITRGNVVRAA 238
I+ R +++R
Sbjct: 133 IVRRIDILRVV 143
>gi|334336246|ref|YP_004541398.1| inosine-5'-monophosphate dehydrogenase [Isoptericola variabilis
225]
gi|334106614|gb|AEG43504.1| inosine-5'-monophosphate dehydrogenase [Isoptericola variabilis
225]
Length = 504
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 31/132 (23%)
Query: 118 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS 177
E RI+GFPV+D D +L+G+V++ DL F V + W T
Sbjct: 122 EYRISGFPVVDADDRLIGIVTNRDL---------------RFTPV-AEWATTK------- 158
Query: 178 KTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
V ++MTP P++ R + EDA LL + K RLP+VD +G++ G+IT + V+
Sbjct: 159 ------VSEVMTPQPLITGRAGISREDATALLRKHKLERLPLVDDEGRIAGLITVKDFVK 212
Query: 237 AALQIKHATEMG 248
+ Q HA++ G
Sbjct: 213 SE-QFPHASKDG 223
>gi|359794084|ref|ZP_09296808.1| CBS domain-containing protein [Mesorhizobium alhagi CCNWXJ12-2]
gi|359249670|gb|EHK53253.1| CBS domain-containing protein [Mesorhizobium alhagi CCNWXJ12-2]
Length = 214
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 76/134 (56%), Gaps = 7/134 (5%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V A +++++ RI+G PV+DD+ ++VG+V++ DL+ + ++ P + + T
Sbjct: 14 VRHAAQLMLDHRISGLPVLDDNGRVVGIVTEGDLMRRSEL-----GVQALAP-IGRQFTT 67
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ + K++ V D+MT PVVV E T+L A L+ E + +PV+ L+GI
Sbjct: 68 SEDSARAYVKSHSWKVADVMTADPVVVDEGTSLTQIADLMTERGIKCVPVMRGT-HLIGI 126
Query: 229 ITRGNVVRAALQIK 242
++R +++R ++ K
Sbjct: 127 VSRADLLRVLVKAK 140
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 188 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEM 247
MT V V ++ AA+L+L+ + LPV+D +G++VGI+T G+++R +E+
Sbjct: 1 MTADVVSVSPNHSVRHAAQLMLDHRISGLPVLDDNGRVVGIVTEGDLMR-------RSEL 53
Query: 248 GAQ 250
G Q
Sbjct: 54 GVQ 56
>gi|148270727|ref|YP_001245187.1| CBS domain-containing protein [Thermotoga petrophila RKU-1]
gi|281413032|ref|YP_003347111.1| hypothetical protein Tnap_1625 [Thermotoga naphthophila RKU-10]
gi|147736271|gb|ABQ47611.1| CBS domain containing protein [Thermotoga petrophila RKU-1]
gi|281374135|gb|ADA67697.1| CBS domain containing protein [Thermotoga naphthophila RKU-10]
Length = 215
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 25/157 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT P T E AL+++ + +I V+ D+ K+VG+V++ DLL
Sbjct: 3 VKDFMTRN-------PITIAPETSFSEALKLMKQNKIKRLIVMKDE-KIVGIVTEKDLLY 54
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ +A + W E+ LLSK + ++MT V V E +EDA
Sbjct: 55 ----ASPSKATTL------NIW----ELHYLLSKLK---IEEIMTKNVVTVNENAPIEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
AR++ E LPVVD G+LVGIIT+ ++ + ++I
Sbjct: 98 ARIMEEKDISGLPVVDDAGRLVGIITQTDIFKVFVEI 134
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+V D MT P+ + T+ +A +L+ + K +RL +V D K+VGI+T +++ A+
Sbjct: 2 LVKDFMTRNPITIAPETSFSEALKLMKQNKIKRL-IVMKDEKIVGIVTEKDLLYAS 56
>gi|168182191|ref|ZP_02616855.1| CBS domain protein [Clostridium botulinum Bf]
gi|170761474|ref|YP_001785527.1| hypothetical protein CLK_3378 [Clostridium botulinum A3 str. Loch
Maree]
gi|237793518|ref|YP_002861070.1| CBS domain-containing protein [Clostridium botulinum Ba4 str. 657]
gi|169408463|gb|ACA56874.1| CBS domain protein [Clostridium botulinum A3 str. Loch Maree]
gi|182674627|gb|EDT86588.1| CBS domain protein [Clostridium botulinum Bf]
gi|229262990|gb|ACQ54023.1| CBS domain protein [Clostridium botulinum Ba4 str. 657]
Length = 138
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 32/138 (23%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V A E++ E + P+ D++ K+VG+++D D+ AL S++ +DN++
Sbjct: 20 VEKAAELMSEHNVGSIPICDNN-KVVGVITDRDI-ALRSVAKG--SDNNIK--------- 66
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
VGD+MT PVV + ++ DAAR++ E + RRLPV D + +VGI
Sbjct: 67 ---------------VGDIMTSNPVVANKDMDIHDAARIMSERQIRRLPVED-NQNIVGI 110
Query: 229 ITRGNVVRAALQIKHATE 246
++ G++ A++ KH E
Sbjct: 111 VSLGDI---AIEPKHENE 125
>gi|150008997|ref|YP_001303740.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
ATCC 8503]
gi|255014828|ref|ZP_05286954.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_7]
gi|256841002|ref|ZP_05546509.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D13]
gi|262383887|ref|ZP_06077023.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_33B]
gi|298375771|ref|ZP_06985727.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_19]
gi|301312047|ref|ZP_07217969.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 20_3]
gi|410102763|ref|ZP_11297688.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D25]
gi|423330258|ref|ZP_17308042.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
CL03T12C09]
gi|423339398|ref|ZP_17317139.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
CL09T03C24]
gi|149937421|gb|ABR44118.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
ATCC 8503]
gi|256736845|gb|EEU50172.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D13]
gi|262294785|gb|EEY82717.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_33B]
gi|298266808|gb|EFI08465.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_19]
gi|300830149|gb|EFK60797.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 20_3]
gi|409230779|gb|EKN23640.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
CL09T03C24]
gi|409231874|gb|EKN24722.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
CL03T12C09]
gi|409237890|gb|EKN30685.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D25]
Length = 491
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T V AL ++ E +I G PV+D+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTITKGKRVADALAMMAEYKIGGIPVVDEGGYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + M +D ++++K N VV ++T++E AA++L E K
Sbjct: 144 RFEKDMNRSID----------EVMTKEN-----------LVVTGQSTDMEAAAQILQEHK 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD+ KL+G+IT ++ +A
Sbjct: 183 IEKLPVVDSHNKLIGLITYKDITKA 207
>gi|225352807|ref|ZP_03743830.1| hypothetical protein BIFPSEUDO_04439 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225156414|gb|EEG69983.1| hypothetical protein BIFPSEUDO_04439 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 692
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D+L ++
Sbjct: 545 QPYSCLDSDDITHVVHEFIRLNVSSLPVVNGDGRLVGFVSDGDVL-----KAIATYESRT 599
Query: 159 FPE-VDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 215
P ST F++ V + +GK V D+ T V ++ + AR+L + ++++
Sbjct: 600 VPTGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKK 659
Query: 216 LPVVDADGKLVGIITRGNVVRAAL 239
LPVVD DG+LVG+I R +V+ A
Sbjct: 660 LPVVDGDGRLVGVIRRKSVMEHAF 683
>gi|390568219|ref|ZP_10248529.1| signal-transduction protein [Burkholderia terrae BS001]
gi|420246966|ref|ZP_14750389.1| putative transcriptional regulator, contains C-terminal CBS domains
[Burkholderia sp. BT03]
gi|389939909|gb|EIN01728.1| signal-transduction protein [Burkholderia terrae BS001]
gi|398072813|gb|EJL64013.1| putative transcriptional regulator, contains C-terminal CBS domains
[Burkholderia sp. BT03]
Length = 231
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 79/143 (55%), Gaps = 19/143 (13%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
KP TV EA + LVE RI+G PV+D + L G++S+ DLL R
Sbjct: 15 KPEMTVQEAA-----KCLVENRISGMPVVDANGVLAGILSEGDLLHRVETGTEKR----- 64
Query: 159 FPEVDSTW-KTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 214
S W + F+ + L S K +G+MV D+MT V V ETT + D A L+ + +
Sbjct: 65 ----RSRWLELFSSTRDLASTFVKEHGRMVADVMTTTVVTVDETTPVADIAELMETRRIK 120
Query: 215 RLPVVDADGKLVGIITRGNVVRA 237
R+PV+ DG LVGIITRGN++RA
Sbjct: 121 RVPVMR-DGALVGIITRGNLIRA 142
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
D+MTP+ + + +++AA+ L+E + +PVVDA+G L GI++ G+++ H
Sbjct: 5 DVMTPSVICAKPEMTVQEAAKCLVENRISGMPVVDANGVLAGILSEGDLL-------HRV 57
Query: 246 EMGAQ 250
E G +
Sbjct: 58 ETGTE 62
>gi|310286641|ref|YP_003937899.1| multidrug resistance transporter [Bifidobacterium bifidum S17]
gi|309250577|gb|ADO52325.1| multidrug resistance transporter, Major Facilitator Superfamily
[Bifidobacterium bifidum S17]
Length = 683
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D++ S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 MKS 582
>gi|15643897|ref|NP_228946.1| hypothetical protein TM1140 [Thermotoga maritima MSB8]
gi|418044700|ref|ZP_12682796.1| CBS domain containing protein [Thermotoga maritima MSB8]
gi|4981687|gb|AAD36216.1|AE001771_9 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351677782|gb|EHA60929.1| CBS domain containing protein [Thermotoga maritima MSB8]
Length = 215
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 25/157 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT P T E AL+++ + +I V+ ++ K+VG+V++ DLL
Sbjct: 3 VKDFMTRN-------PITIAPETSFSEALKLMKQNKIKRLIVMKNE-KIVGIVTEKDLLY 54
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ +A + W E+ LLSK + ++MT V V E T +EDA
Sbjct: 55 ----ASPSKATTL------NIW----ELHYLLSKLK---IEEIMTKDVVTVNENTPIEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
AR++ E LPVVD G+LVGIIT+ ++ + ++I
Sbjct: 98 ARIMEEKDISGLPVVDDAGRLVGIITQTDIFKVFVEI 134
>gi|398822156|ref|ZP_10580542.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
gi|398227150|gb|EJN13386.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
Length = 242
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 76/140 (54%), Gaps = 11/140 (7%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P T++ EA I++++ ++G V++D KLVG+VS+ D + I G+GR
Sbjct: 14 VTPDTSIVEA-----ANIMLKRHVSGLTVVNDTGKLVGVVSEGDFIRRSEI-GTGRKRGR 67
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ K+ ++ +G+ V ++MT +PV + E T L + + +RLP
Sbjct: 68 WLRFILGPGKSASD----FVHEHGRKVSEVMTASPVTITEDTALAEIVDHMERNNVKRLP 123
Query: 218 VVDADGKLVGIITRGNVVRA 237
VV D K+VGI++R N+++A
Sbjct: 124 VVRGD-KVVGIVSRANLLQA 142
>gi|365891727|ref|ZP_09430113.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|365332295|emb|CCE02644.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 242
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 7/137 (5%)
Query: 101 TTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 160
T T D + V A I++++ I+G PV+D KLVG+VS+ D + I G+GR
Sbjct: 13 TVTPDTSIVDAA-NIMLQRHISGLPVVDASGKLVGVVSEGDFIRRTEI-GTGRKRGRWLR 70
Query: 161 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 220
+ K+ + +G+ V ++MT +P+ + + L + ++ +RLPVV
Sbjct: 71 FILGPGKSAAD----FVHEHGRKVAEVMTKSPLTITQDAALAEIVEIMERNHVKRLPVVK 126
Query: 221 ADGKLVGIITRGNVVRA 237
D ++VGI++R N+++A
Sbjct: 127 GD-QVVGIVSRSNLLQA 142
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+MT + V T++ DAA ++L+ LPVVDA GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVTPDTSIVDAANIMLQRHISGLPVVDASGKLVGVVSEGDFIR 55
>gi|311063535|ref|YP_003970260.1| Multidrug resistance protein B [Bifidobacterium bifidum PRL2010]
gi|310865854|gb|ADP35223.1| Multidrug resistance protein B [Bifidobacterium bifidum PRL2010]
Length = 683
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D++ S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 MKS 582
>gi|23465493|ref|NP_696096.1| efflux transporter protein [Bifidobacterium longum NCC2705]
gi|322688919|ref|YP_004208653.1| transport protein [Bifidobacterium longum subsp. infantis 157F]
gi|23326150|gb|AAN24732.1| possible efflux transporter protein [Bifidobacterium longum
NCC2705]
gi|320460255|dbj|BAJ70875.1| putative transport protein [Bifidobacterium longum subsp. infantis
157F]
Length = 683
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D++ S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 MKS 582
>gi|313139333|ref|ZP_07801526.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313131843|gb|EFR49460.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 692
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D++ S + ++
Sbjct: 545 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 600
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 601 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 660
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 661 PVVDGDGRLVGVIRRKSVMEHAF 683
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 529 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 588
Query: 235 VRA 237
+++
Sbjct: 589 MKS 591
>gi|227545976|ref|ZP_03976025.1| efflux transporter protein [Bifidobacterium longum subsp. longum
ATCC 55813]
gi|227213610|gb|EEI81459.1| efflux transporter protein [Bifidobacterium longum subsp. infantis
ATCC 55813]
Length = 683
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D++ S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 MKS 582
>gi|421733867|ref|ZP_16172962.1| multidrug resistance transporter [Bifidobacterium bifidum LMG
13195]
gi|407078240|gb|EKE51051.1| multidrug resistance transporter [Bifidobacterium bifidum LMG
13195]
Length = 618
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D++ S + ++
Sbjct: 471 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 526
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 527 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 586
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 587 PVVDGDGRLVGVIRRKSVMEHAF 609
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 455 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 514
Query: 235 VRA 237
+++
Sbjct: 515 MKS 517
>gi|302526804|ref|ZP_07279146.1| predicted protein [Streptomyces sp. AA4]
gi|302435699|gb|EFL07515.1| predicted protein [Streptomyces sp. AA4]
Length = 200
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 73/152 (48%), Gaps = 30/152 (19%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MT+ E V+P T+ DEA IL E+ PV+DDD +LVG+V++ DL
Sbjct: 5 DLMTSPAE--TVRPWTSADEAA-----GILAERGFPALPVVDDDGRLVGIVTEADL---- 53
Query: 147 SISGSGR--ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
G GR A + P +T VG +MT + +L D
Sbjct: 54 ---GRGRTPAPDGRRPYHPGALET--------------TVGAVMTSPAAAMPPGADLADV 96
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
R L++ K + +P+V ++VGI+TRG+VVR
Sbjct: 97 CRELVDAKSQAMPIVVEGSRVVGIVTRGDVVR 128
>gi|398780622|ref|ZP_10544951.1| hypothetical protein SU9_01020 [Streptomyces auratus AGR0001]
gi|396998087|gb|EJJ09021.1| hypothetical protein SU9_01020 [Streptomyces auratus AGR0001]
Length = 224
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 23/164 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVG MT + V+P T E ++ L E +T PV+D + +G+VS+ DLL
Sbjct: 5 TVGVLMTRG--VVQVRPQTPFKEI-----VKTLTENDVTAVPVVDATGRPMGVVSEADLL 57
Query: 144 ALDSISGSGRADNSM---FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
+G AD S P +++ W+ +K G +LM+ V R
Sbjct: 58 R----KSAGHADPSGRTPIPHLEA-WER--------AKAEGARAEELMSAPAVCARAEWT 104
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 244
+ +AARL+ +RLPVVD KLVGI++RG+++R L+ A
Sbjct: 105 VVEAARLMEVQNVKRLPVVDEADKLVGIVSRGDLLRVFLRKDEA 148
>gi|85373724|ref|YP_457786.1| hypothetical protein ELI_04485 [Erythrobacter litoralis HTCC2594]
gi|341615026|ref|ZP_08701895.1| CBS [Citromicrobium sp. JLT1363]
gi|84786807|gb|ABC62989.1| CBS [Erythrobacter litoralis HTCC2594]
Length = 147
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 32/144 (22%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
P+T+V EA ++V+ PV+DD LVG+++D D +A ++ +D
Sbjct: 13 CCNPSTSVREAA-----NLMVKNDCGEIPVVDDSGTLVGVITDRD-IACRCVADGKSSDT 66
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
S V D+MT +P+ V T+++D + + K RRL
Sbjct: 67 S--------------------------VEDVMTSSPITVTPDTSVDDCRSKMEDNKVRRL 100
Query: 217 PVVDADGKLVGIITRGNVVRAALQ 240
PVVD GK GI+++ ++ R A +
Sbjct: 101 PVVDESGKCCGIVSQADIARHANE 124
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
++MT P +T++ +AA L+++ +PVVD G LVG+IT
Sbjct: 5 NVMTSNPACCNPSTSVREAANLMVKNDCGEIPVVDDSGTLVGVIT 49
>gi|365893976|ref|ZP_09432141.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365425300|emb|CCE04683.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 141
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 27/154 (17%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
T G++MT ++ V TTV E E+L +PV D+D ++G+V+ +D+L
Sbjct: 8 TAGNYMT--RDVKTVTRDTTVREL-----SEMLDRDDFNSYPVTDND-AVIGIVTKFDML 59
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ + N M P+ S + V D+MT + VR T L
Sbjct: 60 RCFAFTQ-----NQMLPQ--------------YSDLMNRKVSDIMTTEFIYVRPDTKLTR 100
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+L++E + R LPV D + +LVGII R ++VRA
Sbjct: 101 VLQLMVEHRIRSLPVTDGENRLVGIIAREDIVRA 134
>gi|298290161|ref|YP_003692100.1| signal transduction protein with CBS domains [Starkeya novella DSM
506]
gi|296926672|gb|ADH87481.1| putative signal transduction protein with CBS domains [Starkeya
novella DSM 506]
Length = 228
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 175
L+E+RI+G P++DD K+VG++S+ DL+ R + VD +
Sbjct: 27 LLERRISGMPIVDDKGKMVGIISEGDLIRRAEAGTERRRSWWLQAFVDD-----GTLAAE 81
Query: 176 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K +G+ D+M PV T L + A L+ +R+P+V+ G LVGI++R N++
Sbjct: 82 YVKAHGRTAADVMHRDPVTAGPDTPLHEIAALMESHGVKRIPIVE-KGHLVGIVSRSNLI 140
Query: 236 RAALQIKHATEM 247
+A K E+
Sbjct: 141 QAVAGTKMGLEI 152
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 186 DLMTPAPVVVRETTNLE-DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
D+MT +PV+ + T+L A+ LLE + +P+VD GK+VGII+ G+++R A
Sbjct: 5 DVMT-SPVITAKATDLVVQIAKTLLERRISGMPIVDDKGKMVGIISEGDLIRRA 57
>gi|213692518|ref|YP_002323104.1| EmrB/QacA subfamily drug resistance transporter [Bifidobacterium
longum subsp. infantis ATCC 15697 = JCM 1222]
gi|384199715|ref|YP_005585458.1| putative transport protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|213523979|gb|ACJ52726.1| drug resistance transporter, EmrB/QacA subfamily [Bifidobacterium
longum subsp. infantis ATCC 15697 = JCM 1222]
gi|320458667|dbj|BAJ69288.1| putative transport protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
Length = 683
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D++ S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVTSKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 MKS 582
>gi|91975824|ref|YP_568483.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris BisB5]
gi|91682280|gb|ABE38582.1| CBS:transport associated [Rhodopseudomonas palustris BisB5]
Length = 243
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
EA + A +++E ++G PV+D D KLVG++S+ D + + G+ R S
Sbjct: 17 EASIIDAANVMLENHVSGLPVVDADGKLVGIISEGDFIRRAEL-GTQRKR--------SR 67
Query: 166 WKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 221
W +G+ VG++MT P + E T +E + + + +RLPV+
Sbjct: 68 WLRLLLGPGTCAADFVHEHGRKVGEVMTHHPHTITEDTPIEAIVKTMEKHHVKRLPVMRG 127
Query: 222 DGKLVGIITRGNVVRA 237
D LVGI+TR N++RA
Sbjct: 128 D-LLVGIVTRKNLLRA 142
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
+MT + + ++ DAA ++LE LPVVDADGKLVGII+ G+ +R A E
Sbjct: 6 IMTEQVMTIGPEASIIDAANVMLENHVSGLPVVDADGKLVGIISEGDFIRRA-------E 58
Query: 247 MGAQ 250
+G Q
Sbjct: 59 LGTQ 62
>gi|383771913|ref|YP_005450978.1| hypothetical protein S23_36670 [Bradyrhizobium sp. S23321]
gi|381360036|dbj|BAL76866.1| hypothetical protein S23_36670 [Bradyrhizobium sp. S23321]
Length = 252
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 99 KPTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
+P T+ E+ V A+++++ +G PV D KLVG+V + D L I
Sbjct: 9 QPVVTISPESSVADAIQLMLSHHFSGLPVTDAGGKLVGIVCESDFLRRTEI-----GTEH 63
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ + S + + + K +G+ V +MTP PV V E T L++ A L+ + +P
Sbjct: 64 VRRRLLSLLLGADRIAREFVKEHGQKVEQVMTPDPVTVAEDTPLDEIAALMECRRVNHIP 123
Query: 218 VVDADGKLVGIITRGNVVRA 237
V+ +G++VG+ITR + V A
Sbjct: 124 VMH-EGRIVGMITRSDFVSA 142
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+M+ V + +++ DA +L+L + LPV DA GKLVGI+ + +R
Sbjct: 6 IMSQPVVTISPESSVADAIQLMLSHHFSGLPVTDAGGKLVGIVCESDFLR 55
>gi|86158851|ref|YP_465636.1| signal transduction protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775362|gb|ABC82199.1| putative signal transduction protein with CBS domains
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 149
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 76/167 (45%), Gaps = 25/167 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVGD+MT P T DE+ V A+ +L EK I PV+ +LVGLV++ L
Sbjct: 7 TVGDWMTKN-------PITIEDESSVIEAIHLLKEKNIRRLPVMRQG-RLVGLVTEKMLF 58
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
P +T + E+ LLSKT V M PAP V T L +
Sbjct: 59 G-------------YMPAKATTLDQW-ELHYLLSKTP---VRAAMNPAPHTVHPDTPLAE 101
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
AARLL + K + VV A G L G++T N + A + A A+
Sbjct: 102 AARLLHDRKLNGVIVVSAQGDLEGLLTTTNALEALIHFSGAASASAK 148
>gi|452949577|gb|EME55044.1| CBS domain containing membrane protein [Amycolatopsis decaplanina
DSM 44594]
Length = 231
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 17/121 (14%)
Query: 120 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 179
R++G PV+DD+ ++VG+VS DLL E + + +L K
Sbjct: 35 RLSGAPVVDDEGRVVGVVSQRDLL-----------------EREIRHRLLRFRPRLRRKV 77
Query: 180 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
G+ +LMT + V + +++A RL+ + + RLPV+D D KLVGI+ R +++R L
Sbjct: 78 EGRRADELMTTPAITVAQDAGVDEAIRLMEDHRVHRLPVLDDDAKLVGIVGRSDLLRGFL 137
Query: 240 Q 240
+
Sbjct: 138 R 138
>gi|377811570|ref|YP_005044010.1| putative signal transduction protein [Burkholderia sp. YI23]
gi|357940931|gb|AET94487.1| putative signal transduction protein with CBS domains [Burkholderia
sp. YI23]
Length = 231
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 79/141 (56%), Gaps = 12/141 (8%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN- 156
V P TT+ E ++LV+ I+ PV+D D ++G++S+ DLL + I
Sbjct: 14 VAPETTIHELA-----KLLVQHHISAAPVVDKDGYVIGVISEGDLLRREEIGTEKEVRRR 68
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
+ + ++ S + + K++ + VG++M+ PV V E T+L + A +L +R+
Sbjct: 69 AWWLDMLSDGGAADYI-----KSHARTVGEIMSRDPVCVSEDTSLAEIAAVLESRHIKRV 123
Query: 217 PVVDADGKLVGIITRGNVVRA 237
PV+ +G+LVGI++R N+V+A
Sbjct: 124 PVL-REGRLVGIVSRSNLVQA 143
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MT + V V T + + A+LL++ PVVD DG ++G+I+ G+++R
Sbjct: 5 DVMTSSVVSVAPETTIHELAKLLVQHHISAAPVVDKDGYVIGVISEGDLLR 55
>gi|384201729|ref|YP_005587476.1| transporter [Bifidobacterium longum subsp. longum KACC 91563]
gi|338754736|gb|AEI97725.1| transport protein [Bifidobacterium longum subsp. longum KACC 91563]
Length = 683
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D++ S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 MKS 582
>gi|374703637|ref|ZP_09710507.1| hypothetical protein PseS9_09665 [Pseudomonas sp. S9]
Length = 141
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 33/166 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MTT H+V D + TA+ L+E RI G PV+D +LVGL+S+ D L
Sbjct: 7 VRDYMTT----HLVTFRAETD---LFTAINRLLEHRIAGAPVVDSQGRLVGLISEGDCLR 59
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
++SG+ ++ G VGD M+ + T++ +
Sbjct: 60 A-TLSGA------------------------YYESIGGTVGDYMSRNIETITPETSVIEV 94
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+ L+ K R+PV+ ADG+LVG I+R +V+RAA + + +Q
Sbjct: 95 SERFLQGKLGRMPVI-ADGRLVGQISRSDVLRAAKEFAQHEQGRSQ 139
>gi|408490629|ref|YP_006866998.1| CBS_pair domain superfamily protein [Psychroflexus torquis ATCC
700755]
gi|408467904|gb|AFU68248.1| CBS_pair domain superfamily protein [Psychroflexus torquis ATCC
700755]
Length = 157
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 79/134 (58%), Gaps = 24/134 (17%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
+ +EIL++ R++G PV+DD +++G++S+ D + IS S R N +V
Sbjct: 40 IIEVVEILIKFRVSGGPVVDDQKRVIGIISEGD--CVKQISES-RYYNMPMEDVS----- 91
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
V+K +SK ++ T +P V +L DAA L L++K RR PVV+ D +++GI
Sbjct: 92 ---VEKYMSK-------EVNTISPDV-----SLFDAANLFLKSKRRRFPVVEND-RIIGI 135
Query: 229 ITRGNVVRAALQIK 242
+++ +++RAAL +K
Sbjct: 136 VSQKDILRAALMLK 149
>gi|21225805|ref|NP_631584.1| hypothetical protein SCO7540 [Streptomyces coelicolor A3(2)]
gi|7799276|emb|CAB90898.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 223
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
+L+E IT PV+D++ + VG+VS+ DLL + G G D S + W +
Sbjct: 28 HLLLEYDITAVPVVDEENRPVGVVSEADLL--QKMWG-GEPDGSAE---HAEWSRASA-- 79
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
K + LMT P+ E+ ++ DAAR++ + +RL VVD DG+L G+++R +
Sbjct: 80 ---GKADATDAAGLMTSPPLCALESWSVVDAARVMARHRIKRLLVVDGDGRLAGVVSRSD 136
Query: 234 VVRAALQIKHA 244
++R L+ A
Sbjct: 137 LLRVFLRTDRA 147
>gi|406998496|gb|EKE16427.1| CBS protein [uncultured bacterium]
Length = 150
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
IL+E RI G PV+DD KLVG++++ D DS + + + + K + +K
Sbjct: 26 ILIENRIHGLPVVDD-GKLVGIITETDFFVKDSFNFHLPSYIDFIRKTKFSGKMSSTEKK 84
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
+++ D+MT V V E ++E + +T++ +PV+ G+L GI+TR +V
Sbjct: 85 QIAELINSTAKDIMTEQCVTVCEEDDIEKLLNVFKDTRFSTVPVICEGGELKGIVTRSDV 144
Query: 235 VR 236
+R
Sbjct: 145 IR 146
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
V D+MT + V ++ A +L+E + LPVVD DGKLVGIIT
Sbjct: 3 VKDIMTKDVITVSSDHGIDQVANILIENRIHGLPVVD-DGKLVGIITE 49
>gi|350560258|ref|ZP_08929098.1| putative signal transduction protein with CBS domains
[Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782526|gb|EGZ36809.1| putative signal transduction protein with CBS domains
[Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 160
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 20/146 (13%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P T+V EA + ++LV+K I G PV+D+ +++G+V+ DL+ R ++
Sbjct: 14 VGPATSV-EALI----DLLVDKGINGLPVVDEFGRVLGMVTTGDLIH--------RVADA 60
Query: 158 MFPEVDSTWK------TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
P DS W+ F + G G +M+ P V + ++ AARLL+E
Sbjct: 61 HVPSRDSIWRESLYKSVFRHDDSEPNPAEGVTAGAVMSRNPAYVLPSDDMAVAARLLIEH 120
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRA 237
+ + LPV+D + +LVG+++R +++R
Sbjct: 121 RVKSLPVLDEE-RLVGMVSRLDLLRC 145
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
V DLMT PV V T++E LL++ LPVVD G+++G++T G+++
Sbjct: 3 VRDLMTRDPVTVGPATSVEALIDLLVDKGINGLPVVDEFGRVLGMVTTGDLIH 55
>gi|189425586|ref|YP_001952763.1| hypothetical protein Glov_2529 [Geobacter lovleyi SZ]
gi|189421845|gb|ACD96243.1| CBS domain containing membrane protein [Geobacter lovleyi SZ]
Length = 149
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 22/162 (13%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV + MT KE L V TT + A E+ V RI+ PV+D L+G+V++ DL+
Sbjct: 3 TVAEIMT-KEVLTVGTETTIRELA------ELFVTHRISSLPVVDAAGALIGIVTESDLV 55
Query: 144 ALDSISGSGRADNSMFPEVDST--WKTFNE----VQKLLSKTNGKMVGDLMTPAPVVVRE 197
++ + P V S W + E ++K L K G+ V D+ P V +
Sbjct: 56 E--------QSKSVHLPTVISLFDWVIYLESEKTLEKELKKMGGRTVADIYQPEAVSIAP 107
Query: 198 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
T +L +AA L+ +PV++ +G+LVGI+ R +++R L
Sbjct: 108 TASLSEAADLMSAHHTNAVPVLE-NGRLVGIVARIDIIRTLL 148
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
K V ++MT + V T + + A L + + LPVVDA G L+GI+T ++V
Sbjct: 2 KTVAEIMTKEVLTVGTETTIRELAELFVTHRISSLPVVDAAGALIGIVTESDLVE 56
>gi|224535972|ref|ZP_03676511.1| hypothetical protein BACCELL_00836, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522427|gb|EEF91532.1| hypothetical protein BACCELL_00836 [Bacteroides cellulosilyticus
DSM 14838]
Length = 273
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 31/141 (21%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
+ P T + V AL ++ E RI G PV+DD+ LVG+V++ DL R
Sbjct: 98 IYDPVTIKRGSTVGDALALMAEYRIGGIPVVDDERYLVGIVTNRDL----------RFVR 147
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
M +D ++++K N ++T P TT++E +++L E + +L
Sbjct: 148 DMNKHID----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHRIEKL 186
Query: 217 PVVDADGKLVGIITRGNVVRA 237
PVVD +GKLVG+IT ++ +A
Sbjct: 187 PVVDKEGKLVGLITYKDITKA 207
>gi|197121843|ref|YP_002133794.1| hypothetical protein AnaeK_1434 [Anaeromyxobacter sp. K]
gi|196171692|gb|ACG72665.1| CBS domain containing protein [Anaeromyxobacter sp. K]
Length = 147
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 75/161 (46%), Gaps = 25/161 (15%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVGD+MT P T DE+ V A+ +L EK I PV+ +LVGLV++ L
Sbjct: 7 TVGDWMTKN-------PITIEDESSVIEAIHLLKEKNIRRLPVMRQG-RLVGLVTEKMLF 58
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
P +T + E+ LLSKT V M PAP V T L +
Sbjct: 59 G-------------YMPAKATTLDQW-ELHYLLSKTP---VRAAMNPAPHTVHPDTPLAE 101
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 244
AARLL + K + VV+A G L G++T N + A + A
Sbjct: 102 AARLLHDRKLNGVLVVNAQGDLQGLLTTTNALEALIHFSAA 142
>gi|20092371|ref|NP_618446.1| hypothetical protein MA3565 [Methanosarcina acetivorans C2A]
gi|19917622|gb|AAM06926.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 155
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 17/146 (11%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
KP TV EA ++L E I+G PV++D +LVG+VS+ DLL L I G N
Sbjct: 16 KPDDTVREAA-----KLLKENNISGAPVLEDG-QLVGVVSEADLLELLVIPEKG---NLW 66
Query: 159 FPEVDSTWK-------TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
P + ++ E +K+LS V ++MT + ++E+A+ L++
Sbjct: 67 LPSPFEVIEVPIRELLSWEETKKMLSDVGSTKVEEMMTKEVHTISSEASVEEASELMVRH 126
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRA 237
+ RLPV++ D ++VGI+TRG+++
Sbjct: 127 RINRLPVMEND-RVVGIVTRGDIIEG 151
>gi|397733004|ref|ZP_10499729.1| CBS domain pair family protein [Rhodococcus sp. JVH1]
gi|396931137|gb|EJI98321.1| CBS domain pair family protein [Rhodococcus sp. JVH1]
Length = 188
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 33/164 (20%)
Query: 89 MTTKEELHVV-KPTTTVDEA-FVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
M T L+V+ +P V ++ + TA +L E PV+DD +LVG+++ D+L
Sbjct: 1 MVTMRVLNVMQRPVRVVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVL--- 57
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
RA + + K VG++MT V L D ++
Sbjct: 58 ------RA----------------------GQASSKTVGEVMTAPAVAAPMYQYLADVSQ 89
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+LL+ R LPVVD DG++VGI++R +VVR L+ +GAQ
Sbjct: 90 MLLQQGLRSLPVVDIDGRVVGILSRSDVVRLMLKPNEMIAVGAQ 133
>gi|357633243|ref|ZP_09131121.1| protein of unknown function DUF190 [Desulfovibrio sp. FW1012B]
gi|357581797|gb|EHJ47130.1| protein of unknown function DUF190 [Desulfovibrio sp. FW1012B]
Length = 408
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
+P +++L+ + + PVI ++ K+ G+V+ DLLA + N + +V + +
Sbjct: 129 LPKVVDLLLARGVKAVPVIGENGKVAGVVTGGDLLARGGMDTRLSLQNILPDDVRAGER- 187
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
++ G D+MT V + E L +AA+++ +RLPVVD G+L+GI
Sbjct: 188 --------ARMAGLTARDVMTSPAVTIGERAGLREAAQVMSRKGLKRLPVVDEAGELIGI 239
Query: 229 ITRGNVVRAALQIKHATE 246
++R +++R+A + A E
Sbjct: 240 VSRADILRSASDLAPAAE 257
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 37 LLSRPGCRVFSVLATSSDRVSALRRSSAVFASGTLT-ANSAAPSSGVYTVGDFMTTKEEL 95
++SR G + V+ + + + + R+ + ++ L A A P +T G F ++ +
Sbjct: 218 VMSRKGLKRLPVVDEAGELIGIVSRADILRSASDLAPAAEALPR---FTAGLFQQARDVM 274
Query: 96 HVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 155
PT D P + LV + VID D K+ G+V D DLL GR
Sbjct: 275 FTDVPTAAPDTPL-PEVVARLVASPLRRVVVIDADRKVRGIVLDGDLL--------GRCG 325
Query: 156 NSMFPEVDSTWKTF--NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 213
P + +F E + + + M ++ T V E T L D + +L T+
Sbjct: 326 PERKPGLLKALFSFGREEAACPMGRASEVMQANVYT-----VSEDTPLMDVLQRMLTTRA 380
Query: 214 RRLPVVDADGKLVGIITRGNVVR 236
+RL VVD +GKL+G++ R +++R
Sbjct: 381 KRLVVVDDEGKLLGMVDRESLLR 403
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 100 PTTTVDE-AFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P T+ E A + A +++ K + PV+D+ +L+G+VS D+L R+ + +
Sbjct: 202 PAVTIGERAGLREAAQVMSRKGLKRLPVVDEAGELIGIVSRADIL---------RSASDL 252
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
P ++ + L + M D+ T AP T L + L+ + RR+ V
Sbjct: 253 APAAEALPRF---TAGLFQQARDVMFTDVPTAAP-----DTPLPEVVARLVASPLRRVVV 304
Query: 219 VDADGKLVGIITRGNVV 235
+DAD K+ GI+ G+++
Sbjct: 305 IDADRKVRGIVLDGDLL 321
>gi|220916635|ref|YP_002491939.1| hypothetical protein A2cp1_1529 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219954489|gb|ACL64873.1| CBS domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 147
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 75/161 (46%), Gaps = 25/161 (15%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVGD+MT P T DE+ V A+ +L EK I PV+ +LVGLV++ L
Sbjct: 7 TVGDWMTKN-------PITIEDESSVIEAIHLLKEKNIRRLPVMRQG-RLVGLVTEKMLF 58
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
P +T + E+ LLSKT V M PAP V T L +
Sbjct: 59 G-------------YMPAKATTLDQW-ELHYLLSKTP---VRAAMNPAPHTVHPDTPLAE 101
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 244
AARLL + K + VV+A G L G++T N + A + A
Sbjct: 102 AARLLHDRKLNGVLVVNAQGDLQGLLTTTNALEALIHFSAA 142
>gi|158522990|ref|YP_001530860.1| signal transduction protein [Desulfococcus oleovorans Hxd3]
gi|158511816|gb|ABW68783.1| putative signal transduction protein with CBS domains
[Desulfococcus oleovorans Hxd3]
Length = 423
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Query: 92 KEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 151
+ + H V P T V + L ++ + I V+D + L+GL+SD DLL + S
Sbjct: 283 RRDTHTVSPDTPVADV-----LRLIGDNDIQRVAVVDAENNLLGLISDKDLLRCFAQKQS 337
Query: 152 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
G + V S +K +E L+ G G +M + V+E +E+A L++E
Sbjct: 338 GIW--GLLSRVGSAFK-HDEADTCLA---GATAGTVMNTELITVKEEMLIEEAIGLMVER 391
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRAAL 239
+RLPVVDA+G+ G+I+R +++R
Sbjct: 392 GLKRLPVVDAEGRFAGMISRDSLLRTGF 419
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P + E + +L+ TG PV+D + VG+++ DL+ R
Sbjct: 126 PRSVTSETPLDEVTRLLLSSIFTGVPVVDKKGRPVGVITQGDLI---------RKGGLPL 176
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
+ ++ +LS+ G+ +MT V + E L +A L++ ++RLPV
Sbjct: 177 RLGLLAESDQDRMKSVLSQMAGRQAEQVMTGPAVTIAEDRPLAEAVDLMISRNFKRLPVT 236
Query: 220 DADGKLVGIITRGNVVRAALQ 240
D +G+L G+++R ++ R ++
Sbjct: 237 DKEGRLCGMVSRLDIFRTVMR 257
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 54/168 (32%)
Query: 80 SGVYTVGDFMTTKEEL---------HVVKPTTTVDEAFVPTALEILVEKRITGFPVID-- 128
+G Y G+ TT+ EL ++V P+T D V+D
Sbjct: 46 AGCYESGETATTRFELLSFNMPVRIYIVMPSTQTDR-------------------VLDGL 86
Query: 129 DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLM 188
+D G+V+ +DL + + R N+ FP + LS V D+M
Sbjct: 87 NDMVTDGIVAIHDLNVV-----AHRTRNAFFP-------------RQLS------VRDVM 122
Query: 189 TPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
T P V T L++ RLLL + + +PVVD G+ VG+IT+G+++R
Sbjct: 123 TADPRSVTSETPLDEVTRLLLSSIFTGVPVVDKKGRPVGVITQGDLIR 170
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A+++++ + PV D + +L G+VS D+ R P+ W F
Sbjct: 221 AVDLMISRNFKRLPVTDKEGRLCGMVSRLDIF---------RTVMREAPD----WNAFRS 267
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
QK+ T+ K V D+ V T + D RL+ + +R+ VVDA+ L+G+I+
Sbjct: 268 -QKV-DVTHLKQVADIARRDTHTVSPDTPVADVLRLIGDNDIQRVAVVDAENNLLGLISD 325
Query: 232 GNVVRAALQ 240
+++R Q
Sbjct: 326 KDLLRCFAQ 334
>gi|448433394|ref|ZP_21585915.1| peptidase M50 [Halorubrum tebenquichense DSM 14210]
gi|445686407|gb|ELZ38731.1| peptidase M50 [Halorubrum tebenquichense DSM 14210]
Length = 399
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 35/154 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVGD MT +E+LH V +V E + + E+R TG+PVID D +LVG+V+ D
Sbjct: 255 TVGDVMTPREDLHTVSGDASVAEL-----MSRMFEERHTGYPVIDGD-ELVGMVTLEDA- 307
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ EV++ + + M D++ AP E L
Sbjct: 308 -----------------------RSIREVERDAYRVDDVMATDVVAAAP----EADAL-T 339
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
A + + E RLPVVD DG+LVG+I+R +++ A
Sbjct: 340 ALQTMQEHGVGRLPVVDGDGELVGLISRSDLMTA 373
>gi|302556791|ref|ZP_07309133.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
gi|302474409|gb|EFL37502.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
Length = 231
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 10/136 (7%)
Query: 105 DEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 164
D FV A L ++++ PV+D ++G+VS+ DLLA ++ + V
Sbjct: 4 DMPFVEVA-RTLAREQLSAVPVVDAGDHVIGVVSESDLLAKAAVM----TEPHRHGPVGR 58
Query: 165 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 224
W+ +L K++G LMT PV V + DAA + RRLPV D G+
Sbjct: 59 LWQ-----HRLYDKSHGDTAATLMTFPPVTVHPAERVSDAAWAAAHARLRRLPVTDHRGR 113
Query: 225 LVGIITRGNVVRAALQ 240
LVG+++R +++RA ++
Sbjct: 114 LVGVVSRRDLLRALIR 129
>gi|254431490|ref|ZP_05045193.1| CBS [Cyanobium sp. PCC 7001]
gi|197625943|gb|EDY38502.1| CBS [Cyanobium sp. PCC 7001]
Length = 145
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A++++ E I G PV+D LVG +++ DL+ + SG +D+ N
Sbjct: 17 AVKLMSEHHIGGMPVLDQAGSLVGELTEQDLM----VRESGFDAGPYVMLLDAVIYLRNP 72
Query: 172 VQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
+Q + + + G VG++M L AAR L E+ +RL VVD DG+ VG++
Sbjct: 73 LQWDRQVHQVLGSTVGEVMRKGSHTCSADLPLPAAARQLHESATQRLFVVDGDGRPVGVL 132
Query: 230 TRGNVVRA 237
TRG+VVRA
Sbjct: 133 TRGDVVRA 140
>gi|441181333|ref|ZP_20970234.1| hypothetical protein SRIM_40043 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440614273|gb|ELQ77565.1| hypothetical protein SRIM_40043 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 241
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 6/128 (4%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
+ +L R TG PV+D D K++G++S+ DL+ + A + + + +
Sbjct: 27 VNLLGRHRKTGLPVVDADGKVLGVISETDLMFRQA------AQDILQNRWYNRRRLTGSA 80
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
+ ++ G G+LMT PV + ++ +AARL++ K RLPVVDA+G+L G++TR
Sbjct: 81 RAARARKRGLRAGELMTSPPVTIGPHQSVTEAARLMVTGKLDRLPVVDAEGRLCGLVTRT 140
Query: 233 NVVRAALQ 240
++++ L+
Sbjct: 141 DLLKVFLR 148
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV-RAALQ 240
+ VG LM V R T+ + LL + LPVVDADGK++G+I+ +++ R A Q
Sbjct: 4 RQVGRLMNTEVVKARSGTSFREVVNLLGRHRKTGLPVVDADGKVLGVISETDLMFRQAAQ 63
>gi|212716979|ref|ZP_03325107.1| hypothetical protein BIFCAT_01925 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660264|gb|EEB20839.1| hypothetical protein BIFCAT_01925 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 692
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D++ SI+ ++
Sbjct: 545 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIA---TYESRT 599
Query: 159 FPE-VDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 215
P ST F++ V + +GK V D+ T V ++ + AR+L + ++++
Sbjct: 600 VPTGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKK 659
Query: 216 LPVVDADGKLVGIITRGNVVRAAL 239
LPVVD DG+LVG+I R +V+ A
Sbjct: 660 LPVVDGDGRLVGVIRRKSVMEHAF 683
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 529 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 588
Query: 235 VRA 237
+++
Sbjct: 589 MKS 591
>gi|409095026|ref|ZP_11215050.1| inosine 5'-monophosphate dehydrogenase [Thermococcus zilligii AN1]
Length = 485
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 42/145 (28%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKR-ITGFPVIDDDWKLVGLVSDYDLLALDSISGS 151
EE+ + P TVD A L+EK I G PVI+D K+VG++S D+
Sbjct: 101 EEVISISPEETVDYAL------FLMEKNDIDGLPVIED-GKVVGVISKKDI--------- 144
Query: 152 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
+ GK+V D+MT P+ V E+ +A L+ E
Sbjct: 145 -------------------------AVKQGKLVKDVMTAEPITVPESVTTGEALNLMFEH 179
Query: 212 KYRRLPVVDADGKLVGIITRGNVVR 236
+ RLPVVD +GKLVGIIT ++ +
Sbjct: 180 RIDRLPVVDGNGKLVGIITMSDLAK 204
>gi|455650952|gb|EMF29706.1| transport protein [Streptomyces gancidicus BKS 13-15]
Length = 224
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 14/130 (10%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDSISGSGRADNSMFPEVDSTWKTFN 170
+ +L E +T PV+DD + +G+VS+ DLL + D SGR P +++ W+
Sbjct: 27 VRLLAENDVTAVPVVDDLGRPMGVVSEADLLRKSSDQADPSGRVP---VPHLEA-WER-- 80
Query: 171 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+K G +LM+ V R ++ +AARL+ +RLPVVD +L+GI++
Sbjct: 81 ------AKAEGSRAEELMSAPAVCARPEWSVVEAARLMEAQHVKRLPVVDETDRLLGIVS 134
Query: 231 RGNVVRAALQ 240
RG+++R L+
Sbjct: 135 RGDLLRVFLR 144
>gi|449137048|ref|ZP_21772381.1| CBS domain-containing protein [Rhodopirellula europaea 6C]
gi|448884323|gb|EMB14823.1| CBS domain-containing protein [Rhodopirellula europaea 6C]
Length = 156
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 25/126 (19%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
AL++L+ +RI+G PV+D+D G+ S+ + + G + P
Sbjct: 26 ALDVLLRQRISGAPVVDEDGHFAGVFSEKSCMKF--VVGMAYENLPSIP----------- 72
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
VGDL P + E T+L A+ L+ RRLPV+D+DGKL G I+R
Sbjct: 73 ------------VGDLTDKNPPTISEETDLLTIAQTFLDAACRRLPVLDSDGKLRGQISR 120
Query: 232 GNVVRA 237
+V+RA
Sbjct: 121 RDVMRA 126
>gi|78355812|ref|YP_387261.1| hypothetical protein [Desulfovibrio alaskensis G20]
gi|78218217|gb|ABB37566.1| CBS domain containing membrane protein [Desulfovibrio alaskensis
G20]
Length = 224
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 17/139 (12%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A +++ E P++D D KLVG++SD D+ E + T +
Sbjct: 23 AAKLMKEHSFDRLPIVDKDNKLVGIISDRDI-----------------KEASPSKATTLD 65
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
V +L + V D+MT V + +E+AA ++LE + +PVVD DG+L GIIT
Sbjct: 66 VHELYYLLSEIKVNDIMTRDVVAAKPDDTVENAALVMLERDFSGMPVVDDDGRLTGIITD 125
Query: 232 GNVVRAALQIKHATEMGAQ 250
++ + L I A G Q
Sbjct: 126 KDIFKVLLSITGARHGGVQ 144
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL- 143
V D MT ++ KP TV+ A + +++E+ +G PV+DDD +L G+++D D+
Sbjct: 78 VNDIMT--RDVVAAKPDDTVENAAL-----VMLERDFSGMPVVDDDGRLTGIITDKDIFK 130
Query: 144 ALDSISGS 151
L SI+G+
Sbjct: 131 VLLSITGA 138
>gi|384217331|ref|YP_005608497.1| hypothetical protein BJ6T_36350 [Bradyrhizobium japonicum USDA 6]
gi|354956230|dbj|BAL08909.1| hypothetical protein BJ6T_36350 [Bradyrhizobium japonicum USDA 6]
Length = 242
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 19/144 (13%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P T++ EA I++++ ++G V+DD KLVG+VS+ D + I G+GR
Sbjct: 14 VTPHTSIVEA-----ANIMLKRHVSGLTVVDDAGKLVGVVSEGDFVRRSEI-GTGRKRGR 67
Query: 158 MFPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 213
W F E +G+ V ++MT + V + E T L + L+
Sbjct: 68 --------WLRFILGPGESASDFVHEHGRKVSEVMTTSVVTITEDTALAEIVDLMERNNV 119
Query: 214 RRLPVVDADGKLVGIITRGNVVRA 237
+RLPVV D K+VGI++R N+++A
Sbjct: 120 KRLPVVRGD-KVVGIVSRANLLQA 142
>gi|419707528|ref|ZP_14235011.1| Acetoin utilization putative/CBS domain protein [Streptococcus
salivarius PS4]
gi|383282678|gb|EIC80659.1| Acetoin utilization putative/CBS domain protein [Streptococcus
salivarius PS4]
Length = 219
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 86/164 (52%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFM + + V P TTV A +I+ EK + PVI++D KLVGL+++ +
Sbjct: 3 VKDFMAKR--VVYVSPQTTV-----AAAADIMREKGLRRLPVIEND-KLVGLITEGTM-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
AD S P +T + E+ LL+KT VGD+M + V + +LEDA
Sbjct: 53 ---------ADAS--PS-KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
++L+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 98 IYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
>gi|386837900|ref|YP_006242958.1| hypothetical protein SHJG_1810 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374098201|gb|AEY87085.1| hypothetical protein SHJG_1810 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451791192|gb|AGF61241.1| hypothetical protein SHJGH_1575 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 233
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 118 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL-- 175
E R++ PV+DD ++VG+VS+ DLL G G W + + L
Sbjct: 34 EWRVSALPVLDDAGRVVGVVSEADLLRKQEYGGGG-----------LDW--YGRARDLTG 80
Query: 176 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K + G+LMT V V L AAR++ + +RLPVVD G L GI++R +++
Sbjct: 81 FRKADAATAGELMTAPAVTVPPDAGLAQAARIMARGEVKRLPVVDHAGMLKGIVSRSDLL 140
Query: 236 RAALQ 240
+ L+
Sbjct: 141 KVFLR 145
>gi|329896780|ref|ZP_08271717.1| CBS domain protein [gamma proteobacterium IMCC3088]
gi|328921581|gb|EGG28960.1| CBS domain protein [gamma proteobacterium IMCC3088]
Length = 127
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 28/143 (19%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA--LDSISGSGRADNS 157
P T + A + A++I+V+ ++TG VID+ +VG++S+ D L L+SI G D+
Sbjct: 5 PLTISESASIAQAVQIIVDNKLTGITVIDEHGVVVGVLSEIDCLKAILNSIYNDGDPDHR 64
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ E +T KL + TP+ +V + A+ +LET+ RR P
Sbjct: 65 LVNEFMTT--------KL----------NTCTPSDSIV-------EVAQSMLETQQRRRP 99
Query: 218 VVDADGKLVGIITRGNVVRAALQ 240
V++ DGKLVG ++ GNV+ A ++
Sbjct: 100 VLE-DGKLVGQVSSGNVLWALME 121
>gi|311746125|ref|ZP_07719910.1| polyA polymerase family protein [Algoriphagus sp. PR1]
gi|126576346|gb|EAZ80624.1| polyA polymerase family protein [Algoriphagus sp. PR1]
Length = 153
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 31/161 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D M+TK L P T+D LE+L +++I+G PV+D+ LVG++S+ D L
Sbjct: 23 VKDHMSTK--LVTFLPDDTID-----MVLEVLTKRKISGAPVVDESGSLVGIISEVDCLK 75
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ I G + K K M D++T P ++ DA
Sbjct: 76 -EIIKGK-----------------YTNTPKFPGKVKDHMSVDVITLGP-----ELSIFDA 112
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
A+ LE K RR PV+ DG L+G I+ +++RA ++K T
Sbjct: 113 AQKFLELKIRRFPVI-RDGSLIGQISLSDIIRAFPKLKDTT 152
>gi|170741756|ref|YP_001770411.1| hypothetical protein M446_3596 [Methylobacterium sp. 4-46]
gi|168196030|gb|ACA17977.1| CBS domain containing membrane protein [Methylobacterium sp. 4-46]
Length = 241
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW-KTFNEVQ 173
I VEKRI+ PV+D+ LVG+VS+ DLL ++ R S+W + F ++
Sbjct: 26 IFVEKRISAAPVVDESGALVGIVSEGDLLHRAELATDRR---------RSSWLRFFASIE 76
Query: 174 KL---LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA----DGKLV 226
L + +G+ V D+M V T L + +L RR+P+V+A +LV
Sbjct: 77 TLAHEYREAHGRTVRDVMASPVVTATPDTPLPEIVEILERRHIRRVPIVEARPGLPERLV 136
Query: 227 GIITRGNVVRA 237
GI+TR ++VRA
Sbjct: 137 GIVTRSDLVRA 147
>gi|406926052|gb|EKD62378.1| hypothetical protein ACD_52C00201G0002 [uncultured bacterium]
Length = 154
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK---- 167
L +L++ +I+G PV++ +LVG++S+ DLL +FP + ++
Sbjct: 23 VLRVLIKNKISGVPVVNSKKRLVGVISEKDLLI------------HLFPSIKEFYRDIDY 70
Query: 168 --TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
+ + ++ K N LMT V ++ A +LL RRLPVV GKL
Sbjct: 71 YLSLDVIETEAKKINRLSASQLMTKKVYTVAPEDHVLKACSMLLIHNVRRLPVVGEGGKL 130
Query: 226 VGIITRGNVVRAALQIKHATEMGAQ 250
VGI+T ++ R LQ TE G +
Sbjct: 131 VGIVTTNDLYRKFLQ--KYTEQGLK 153
>gi|403253876|ref|ZP_10920176.1| CBS domain-containing protein [Thermotoga sp. EMP]
gi|402810779|gb|EJX25268.1| CBS domain-containing protein [Thermotoga sp. EMP]
Length = 215
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 25/157 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT P T E AL+++ + +I V+ ++ K+VG+V++ DLL
Sbjct: 3 VKDFMTRN-------PITIAPETSFSEALKLMKQNKIKRLIVMKNE-KIVGIVTEKDLLY 54
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ +A + W E+ LLSK + ++MT V V E T +EDA
Sbjct: 55 ----ASPSKATTL------NIW----ELHYLLSKLK---IEEIMTKDVVTVNENTPIEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
AR++ E LPVVD G LVGIIT+ ++ + ++I
Sbjct: 98 ARIMEEKDISGLPVVDDAGHLVGIITQTDIFKVFVEI 134
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+V D MT P+ + T+ +A +L+ + K +RL +V + K+VGI+T +++ A+
Sbjct: 2 LVKDFMTRNPITIAPETSFSEALKLMKQNKIKRL-IVMKNEKIVGIVTEKDLLYAS 56
>gi|336121852|ref|YP_004576627.1| signal transduction protein with CBS domains [Methanothermococcus
okinawensis IH1]
gi|334856373|gb|AEH06849.1| putative signal transduction protein with CBS domains
[Methanothermococcus okinawensis IH1]
Length = 278
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 31/203 (15%)
Query: 36 LLLSRPGCRVFSVLATSSDRVSALRRSSAV--FASGTLTANSAAPSSGVYTVGDFMTTKE 93
+ ++ G R +V+ ++RV + S + F G N + +
Sbjct: 26 ITMNNSGTRRITVVDAGTNRVVGIITSMDIVDFMGGGSKYNLVKSKHNHNLLAAINEPVK 85
Query: 94 ELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 153
E+ + + A + +E+ +EK + G PV+D D+KL+ +++ D++
Sbjct: 86 EIMTNEAVCIKENALLKEVIELFIEKNVGGVPVVDKDYKLISTITERDIIRF-------- 137
Query: 154 ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 213
+ VD + K D MT PVV L+D AR +L +
Sbjct: 138 ----LKDNVDKSEKVI----------------DYMTEKPVVATSGERLKDVARTMLRNGF 177
Query: 214 RRLPVVDADGKLVGIITRGNVVR 236
RRLPV+ D +LVG+IT + ++
Sbjct: 178 RRLPVISED-RLVGMITSTDFIK 199
>gi|357030115|ref|ZP_09092079.1| hypothetical protein MEA186_34834 [Mesorhizobium amorphae
CCNWGS0123]
gi|355533090|gb|EHH02430.1| hypothetical protein MEA186_34834 [Mesorhizobium amorphae
CCNWGS0123]
Length = 232
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 79/144 (54%), Gaps = 11/144 (7%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
++PT ++ +A +++ ++++G PVI D LVG+VS+ D L + G+ R +
Sbjct: 14 IEPTASISDAA-----GLMLSRKVSGLPVICSDGTLVGVVSEGDFLRRVEL-GTKRNRSR 67
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ S + +E K NG+ + ++MT + V +L + L+ +R+P
Sbjct: 68 WLEFLVSPGRAADE----YVKANGRRIEEVMTAEVITVPPAASLPEIVELMARHHVKRVP 123
Query: 218 VVDADGKLVGIITRGNVVRAALQI 241
VVD+ GK+VGIITR +++RA L +
Sbjct: 124 VVDS-GKVVGIITRSDLLRALLSV 146
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 183 MVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
M + + APV+ + T ++ DAA L+L K LPV+ +DG LVG+++ G+ +R
Sbjct: 1 MQAEAIMTAPVIGIEPTASISDAAGLMLSRKVSGLPVICSDGTLVGVVSEGDFLR 55
>gi|338740852|ref|YP_004677814.1| hypothetical protein HYPMC_4039 [Hyphomicrobium sp. MC1]
gi|337761415|emb|CCB67248.1| conserved protein of unknown function [Hyphomicrobium sp. MC1]
Length = 242
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 86/155 (55%), Gaps = 23/155 (14%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MTTK + ++P T+ E ++ +++ RI+G PV+ +D KLVG+V++ D L
Sbjct: 5 DVMTTK--VISIRPDATLSEM-----IKKMLDHRISGLPVVSEDGKLVGVVTEGDCLR-- 55
Query: 147 SISGSGRADNSMFPEVD-STWKTFNEVQKLLS----KTNGKMVGDLMTPAPVVVRETTNL 201
RA+ EV S W+ + L+ +T+G+ V ++MT P+ V T L
Sbjct: 56 ------RAETGT--EVKRSFWRDMLTGSETLANEYIRTHGRKVSEVMTRDPISVSPDTEL 107
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+ ++ + + +R+PVV DG +VGI++R N+++
Sbjct: 108 SEVIHVMEKNRIKRVPVV-KDGAVVGILSRANLLQ 141
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
D+MT + +R L + + +L+ + LPVV DGKLVG++T G+ +R A
Sbjct: 5 DVMTTKVISIRPDATLSEMIKKMLDHRISGLPVVSEDGKLVGVVTEGDCLRRA 57
>gi|385675834|ref|ZP_10049762.1| CBS domain containing membrane protein [Amycolatopsis sp. ATCC
39116]
Length = 221
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAF-VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
VGD MT P +V A + +L + +I PV+D + VG+VS+ DLL
Sbjct: 6 VGDLMT--------HPVVSVVPAMPFKNLVRLLDQYQIGAVPVVDGHDRRVGVVSESDLL 57
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
A + + G+ R ++ P W+ + + + + ++T MT V+ + +
Sbjct: 58 AKEDLRGADRPPSAFAP--GRRWRWWGKSRAMTAETA-------MTRRVRVIGQDEPVAV 108
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
AAR L RRL VVD DGKLVG++ R +V+R L+
Sbjct: 109 AARRLAREHLRRLYVVDGDGKLVGVLARRDVLRLFLR 145
>gi|117927799|ref|YP_872350.1| signal-transduction protein [Acidothermus cellulolyticus 11B]
gi|117648262|gb|ABK52364.1| putative signal-transduction protein with CBS domains [Acidothermus
cellulolyticus 11B]
Length = 155
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 36/137 (26%)
Query: 100 PTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P TVD + V +LV+ RI+ PV+D +VGLVS++DL+
Sbjct: 10 PVYTVDVDTPVADIAHLLVQHRISAVPVVDASGAVVGLVSEHDLI--------------- 54
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
S+T GK+ D+M+ + V E T +ED LLL+ + RR+PV
Sbjct: 55 ------------------SRT-GKVAADIMSTGVISVTEDTEVEDVRHLLLDRRIRRVPV 95
Query: 219 VDADGKLVGIITRGNVV 235
V G+L+GI++R ++V
Sbjct: 96 VSG-GQLIGIVSRADLV 111
>gi|154487114|ref|ZP_02028521.1| hypothetical protein BIFADO_00954 [Bifidobacterium adolescentis
L2-32]
gi|154084977|gb|EDN84022.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium adolescentis L2-32]
Length = 692
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P + +D + + + ++ PV++ D +LVG VSD D++ S + ++
Sbjct: 545 HPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTV 600
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 601 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 660
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 661 PVVDGDGRLVGVIRRKSVMEHAF 683
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L +T + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 529 LFKQTQEQSIGGIMDDHPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 588
Query: 235 VRA 237
+++
Sbjct: 589 MKS 591
>gi|291279250|ref|YP_003496085.1| hypothetical protein DEFDS_0853 [Deferribacter desulfuricans SSM1]
gi|290753952|dbj|BAI80329.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 141
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 17/126 (13%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
L EK I+G PV+D + +VG+ S+ DLLA L I P +D T V+
Sbjct: 27 LREKNISGVPVLDGNNNVVGVFSESDLLAQLPDILHEAEQ----IPLIDVKELTDAPVKT 82
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
++ K P+ + E +L+ AA L L RLPV++ +GKLVGII+ G+V
Sbjct: 83 IMGK------------PPITIHENDSLKKAAELFLTKYIHRLPVLNDEGKLVGIISLGDV 130
Query: 235 VRAALQ 240
++A ++
Sbjct: 131 LKAFIE 136
>gi|421589648|ref|ZP_16034763.1| hypothetical protein RCCGEPOP_12430 [Rhizobium sp. Pop5]
gi|403705361|gb|EJZ20969.1| hypothetical protein RCCGEPOP_12430 [Rhizobium sp. Pop5]
Length = 229
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG---RADNSMFPEVDSTWKT 168
A ++ ++ ++G PV+DD +L+G++S+ DL+ +S +AD + P
Sbjct: 23 AARLMSDQHVSGIPVVDDGGRLLGVISEGDLIRRTELSSGAFVLKADMGLGP-------- 74
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+E K VGD+MT PV + E L A L+ + +R+PV+ DGKL+GI
Sbjct: 75 -DERANAFVKRCAWRVGDVMTSDPVTIDEDAPLSRVAGLMQDRGIKRIPVL-RDGKLIGI 132
Query: 229 ITRGNVVRAALQIK 242
++R ++++ K
Sbjct: 133 VSRADLLQVIYSAK 146
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V D+M V + + AARL+ + +PVVD G+L+G+I+ G+++R
Sbjct: 2 LVKDVMATTVVTLSPDNGVRHAARLMSDQHVSGIPVVDDGGRLLGVISEGDLIR 55
>gi|86134872|ref|ZP_01053454.1| conserved hypothetical protein [Polaribacter sp. MED152]
gi|85821735|gb|EAQ42882.1| conserved hypothetical protein [Polaribacter sp. MED152]
Length = 155
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 30/171 (17%)
Query: 75 SAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLV 134
S + S V D+MTTK L K ++D + +L++ +I+G PV++D+ +L+
Sbjct: 13 SHSKSEEQILVSDYMTTK--LITFKAEDSLDHV-----IALLIKNKISGGPVVNDNNQLI 65
Query: 135 GLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV 194
G++S+ D + IS S K +N + S TN VG M
Sbjct: 66 GIISETDCIK--HISES---------------KYYN----MPSDTNN-TVGKYMVTDVDT 103
Query: 195 VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
+ + N+ DAA + + RR PV D +GKL+G +++ +V++AA+++K T
Sbjct: 104 IDKDMNIFDAAFKFISSHRRRFPVCD-NGKLIGQLSQKDVLKAAIKVKGNT 153
>gi|297568229|ref|YP_003689573.1| CBS domain containing membrane protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296924144|gb|ADH84954.1| CBS domain containing membrane protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 150
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 15/132 (11%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF----- 169
+L E+RI+G PV+D+ +LVG+V++ DL+ +A P + +
Sbjct: 27 LLWERRISGAPVVDEQGELVGVVTESDLI--------DQAKKLHIPTAIAVLEAVIYLER 78
Query: 170 -NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+V++ L+K G V D+ T P V T L++ A ++ E LPV+D GKLVG+
Sbjct: 79 GRKVEEELNKMAGSTVKDICTTKPATVAPDTPLDEIATVMAEKHLHTLPVMDR-GKLVGV 137
Query: 229 ITRGNVVRAALQ 240
+ + +V+RA +
Sbjct: 138 VGKADVIRALIN 149
>gi|237511946|gb|ACQ99689.1| putative bile efflux protein [Bifidobacterium breve UCC2003]
gi|339479060|gb|ABE95522.1| Multidrug resistance protein B, MFS member, bile efflux, induced
upon bile salt exposure [Bifidobacterium breve UCC2003]
Length = 683
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ D +LVG VSD D+L S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVTATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVV+ DG+LVG+I R +V+ A
Sbjct: 652 PVVNGDGRLVGVIRRKSVMEHAF 674
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L + + +G +M P ++ ++ R + LPVV+ DG+LVG ++ G+V
Sbjct: 520 LFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDV 579
Query: 235 VRA 237
+++
Sbjct: 580 LKS 582
>gi|326792093|ref|YP_004309914.1| hypothetical protein Clole_3019 [Clostridium lentocellum DSM 5427]
gi|326542857|gb|ADZ84716.1| CBS domain containing membrane protein [Clostridium lentocellum DSM
5427]
Length = 150
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 105 DEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 164
+E + + IL++ +I+G PV+D++ +LVG+VS+ DL+ + G +S + S
Sbjct: 16 NEELLEDIINILMKHQISGVPVVDENNQLVGVVSEKDLMTKEK----GLNISSYIAFMTS 71
Query: 165 TW-----KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
K E + +L T K V + TPA V E T +E+ L++ R+PV+
Sbjct: 72 ILGIDGKKQLGESRAILQTTTAKEV--MSTPAFAVHEEAT-IEEVVSLMMNRHINRIPVI 128
Query: 220 DADGKLVGIITR 231
+ D KLVGII R
Sbjct: 129 NEDNKLVGIIGR 140
>gi|319900081|ref|YP_004159809.1| inosine-5'-monophosphate dehydrogenase [Bacteroides helcogenes P
36-108]
gi|319415112|gb|ADV42223.1| inosine-5'-monophosphate dehydrogenase [Bacteroides helcogenes P
36-108]
Length = 491
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL+++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSTVADALDLMAEYKIGGIPVVDDERYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + + +D ++++K N ++T P TT+++ +++L E +
Sbjct: 144 RFEKDLSKRID----------EVMTKEN------IITTNP-----TTDMDAVSQILQEHR 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD D KLVG+IT ++ +A
Sbjct: 183 IEKLPVVDKDNKLVGLITYKDITKA 207
>gi|302555051|ref|ZP_07307393.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
gi|302472669|gb|EFL35762.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
Length = 221
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 70/130 (53%), Gaps = 15/130 (11%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
+E++ + +++ PV++ + +++G+VS+ DLL + DS F ++
Sbjct: 29 VEVMEQWKVSALPVLEGEGRVIGVVSEADLLFKEEFR-------------DSDPDRFTQL 75
Query: 173 QKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+L L K G DLM+ V V L AAR++ + K +RLPVV+ +G L G+++
Sbjct: 76 GRLSDLVKAGGMTAEDLMSSPAVTVHTDATLAQAARIMAQRKVKRLPVVNEEGLLEGVVS 135
Query: 231 RGNVVRAALQ 240
R ++++ L+
Sbjct: 136 RADLLKVFLR 145
>gi|305666499|ref|YP_003862786.1| CBS domain-containing protein [Maribacter sp. HTCC2170]
gi|88708766|gb|EAR01001.1| CBS domain protein [Maribacter sp. HTCC2170]
Length = 155
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 31/158 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MTTK L KP +V+E ++ L+ +I+G PV++D +LVG++S+ D +
Sbjct: 23 VSDYMTTK--LITFKPDQSVEEV-----IDSLINNKISGGPVVNDKNELVGIISEGDCIK 75
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
IS S + M + + +MV ++ T + N+ DA
Sbjct: 76 --HISDSRYYNMPMDDD----------------RIENRMVKNVET-----IDGNMNIFDA 112
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
A L K RR P+V+A GKLVG I++ ++++A +++K
Sbjct: 113 ANKFLNEKRRRFPIVEA-GKLVGQISQKDILKATMKLK 149
>gi|227823207|ref|YP_002827179.1| CBS domain-containing protein [Sinorhizobium fredii NGR234]
gi|227342208|gb|ACP26426.1| putative CBS domain protein [Sinorhizobium fredii NGR234]
Length = 223
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 89/163 (54%), Gaps = 24/163 (14%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
V D MTTK VVK P +V +A +++ + ++G PV+DD +L+G++S+ DL
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQA-----AKLMFDHHVSGVPVVDDGGRLLGVISEGDL 53
Query: 143 LALDSI-SGSG--RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 199
+ + SG+ AD ++ P+ + + + + + VGD+MT PV + E
Sbjct: 54 IRRTELCSGASVLMADMAIDPD--------DRANAFVRRCSWR-VGDVMTANPVTIEEEA 104
Query: 200 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
L A L+ E +R+PV+ +G+LVGI++R ++++A K
Sbjct: 105 PLARVAGLMQEHGIKRIPVM-RNGELVGIVSRADLLQAIFSTK 146
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V D+MT V + ++ AA+L+ + +PVVD G+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDGGRLLGVISEGDLIR 55
>gi|410095930|ref|ZP_11290922.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides goldsteinii
CL02T12C30]
gi|409227961|gb|EKN20856.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides goldsteinii
CL02T12C30]
Length = 491
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T V AL ++ E +I G PV+D+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTITKGKRVADALAMMAEYKIGGIPVVDEGGYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + M +D ++++K N VV ++T+LE AA++L + K
Sbjct: 144 RFERDMNRSID----------EVMTKEN-----------LVVTDQSTDLEAAAQILQQHK 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD+ KL+G++T ++ +A
Sbjct: 183 IEKLPVVDSHNKLIGLVTYKDITKA 207
>gi|329962623|ref|ZP_08300571.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fluxus YIT
12057]
gi|328529654|gb|EGF56552.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fluxus YIT
12057]
Length = 491
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T + V AL ++ E +I G PV+DD+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTIKRGSTVADALALMAEYKIGGIPVVDDEKYLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + M +D ++++K N ++T P TT++E +++L E +
Sbjct: 144 RFEKDMDKRID----------EVMTKDN------IITTNP-----TTDMEAVSQILQEHR 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD + KLVG+IT ++ +A
Sbjct: 183 IEKLPVVDKENKLVGLITYKDITKA 207
>gi|375101298|ref|ZP_09747561.1| CBS-domain-containing membrane protein [Saccharomonospora cyanea
NA-134]
gi|374662030|gb|EHR61908.1| CBS-domain-containing membrane protein [Saccharomonospora cyanea
NA-134]
Length = 201
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 19/129 (14%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V A +L E T PV+DD ++VG+V++ D++ +GR + D+ +++
Sbjct: 20 VKRATRLLAEHGFTALPVVDDAGRVVGVVTEADVM-------TGRVPH------DARYRS 66
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ + VG++MTPAP ++ ++ D LLE +R +PV+ A KLVGI
Sbjct: 67 GSSTGPVAG-----TVGEVMTPAPTCTQQGADVADLVGTLLEGHHRAVPVL-AGEKLVGI 120
Query: 229 ITRGNVVRA 237
+TR ++VRA
Sbjct: 121 VTRRDIVRA 129
>gi|322373958|ref|ZP_08048493.1| acetoin utilization protein AcuB [Streptococcus sp. C150]
gi|321277330|gb|EFX54400.1| acetoin utilization protein AcuB [Streptococcus sp. C150]
Length = 219
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 86/164 (52%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFM + + V P TTV A +I+ EK + PVI++D KLVGL+++ +
Sbjct: 3 VKDFMAKR--VVYVSPQTTV-----AAAADIMREKGLRRLPVIEND-KLVGLITEGTM-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
AD S P +T + E+ LL+KT VGD+M + V + +LEDA
Sbjct: 53 ---------ADAS--PS-KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
++L+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 98 IYIMLKNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
>gi|148378202|ref|YP_001252743.1| hypothetical protein CBO0199 [Clostridium botulinum A str. ATCC
3502]
gi|153930979|ref|YP_001382603.1| hypothetical protein CLB_0240 [Clostridium botulinum A str. ATCC
19397]
gi|153936233|ref|YP_001386155.1| hypothetical protein CLC_0255 [Clostridium botulinum A str. Hall]
gi|153940514|ref|YP_001389562.1| hypothetical protein CLI_0264 [Clostridium botulinum F str.
Langeland]
gi|168177532|ref|ZP_02612196.1| CBS domain protein [Clostridium botulinum NCTC 2916]
gi|170756627|ref|YP_001779830.1| hypothetical protein CLD_0576 [Clostridium botulinum B1 str. Okra]
gi|226947420|ref|YP_002802511.1| CBS domain-containing protein [Clostridium botulinum A2 str. Kyoto]
gi|384460642|ref|YP_005673237.1| hypothetical protein CBF_0232 [Clostridium botulinum F str. 230613]
gi|421838951|ref|ZP_16272654.1| hypothetical protein CFSAN001627_24621 [Clostridium botulinum
CFSAN001627]
gi|429243973|ref|ZP_19207455.1| hypothetical protein CFSAN001628_000690 [Clostridium botulinum
CFSAN001628]
gi|148287686|emb|CAL81751.1| conserved hypothetical membrane [Clostridium botulinum A str. ATCC
3502]
gi|152927023|gb|ABS32523.1| CBS domain protein [Clostridium botulinum A str. ATCC 19397]
gi|152932147|gb|ABS37646.1| CBS domain protein [Clostridium botulinum A str. Hall]
gi|152936410|gb|ABS41908.1| CBS domain protein [Clostridium botulinum F str. Langeland]
gi|169121839|gb|ACA45675.1| CBS domain protein [Clostridium botulinum B1 str. Okra]
gi|182670387|gb|EDT82361.1| CBS domain protein [Clostridium botulinum NCTC 2916]
gi|226844378|gb|ACO87044.1| CBS domain protein [Clostridium botulinum A2 str. Kyoto]
gi|295317659|gb|ADF98036.1| CBS domain protein [Clostridium botulinum F str. 230613]
gi|409736556|gb|EKN37942.1| hypothetical protein CFSAN001627_24621 [Clostridium botulinum
CFSAN001627]
gi|428758893|gb|EKX81284.1| hypothetical protein CFSAN001628_000690 [Clostridium botulinum
CFSAN001628]
Length = 138
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 32/138 (23%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V A +++ E + P+ D++ K+VG+++D D+ AL S++ +DN++
Sbjct: 20 VEKAAQLMSEHNVGSIPICDNN-KVVGVITDRDI-ALRSVAKG--SDNNIK--------- 66
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
VGD+MT PVV + ++ DAAR++ E + RRLPV D + +VGI
Sbjct: 67 ---------------VGDIMTSNPVVANKDMDIHDAARIMSERQIRRLPVED-NQNIVGI 110
Query: 229 ITRGNVVRAALQIKHATE 246
++ G++ A++ KH E
Sbjct: 111 VSLGDI---AIEPKHENE 125
>gi|313204351|ref|YP_004043008.1| inosine-5'-monophosphate dehydrogenase [Paludibacter
propionicigenes WB4]
gi|312443667|gb|ADQ80023.1| inosine-5'-monophosphate dehydrogenase [Paludibacter
propionicigenes WB4]
Length = 492
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 43/177 (24%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEE---LHVVK---------PTTTVDEAFVPTALEILVEKR 120
A S A G+ + MT E+ + +VK P T A V AL ++ E +
Sbjct: 62 AISIAREGGIGVIHKNMTIAEQAKQVEIVKRAENGMISNPVTIRKGATVGDALALMAEYK 121
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
I G PV+D+ LVG+V++ DL R M EVD+ +++K N
Sbjct: 122 IGGIPVVDEQGYLVGIVTNRDL----------RFQRDMDKEVDA----------IMTKEN 161
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
L+T +T+LE AA +L + K +LPVVD + KLVG++T ++ +A
Sbjct: 162 ------LITTT-----RSTDLEAAADILQQFKIEKLPVVDENNKLVGLLTYKDITKA 207
>gi|302336892|ref|YP_003802098.1| signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
gi|301634077|gb|ADK79504.1| putative signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
Length = 214
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 18/137 (13%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T D+ V A+ ++ ++++ PV+D + KLVG+VS+ DLL
Sbjct: 11 PFTISDDTAVADAMALIHKEKVHRLPVLDKERKLVGIVSEKDLLYAS------------- 57
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
P ST + E+ LL++ K V MT + V E T +EDAAR++++ LPV+
Sbjct: 58 PSPASTLSVY-EMSALLARLKVKKV---MTKEVITVTEQTLIEDAARIMVDKNVGGLPVM 113
Query: 220 DADGKLVGIITRGNVVR 236
DG LVGIIT ++ +
Sbjct: 114 -RDGLLVGIITESDIFK 129
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
V +MT P + + T + DA L+ + K RLPV+D + KLVGI++ +++ A+
Sbjct: 3 VSRVMTHNPFTISDDTAVADAMALIHKEKVHRLPVLDKERKLVGIVSEKDLLYAS 57
>gi|387816426|ref|YP_005676770.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
H04402 065]
gi|322804467|emb|CBZ02017.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
H04402 065]
Length = 138
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 32/138 (23%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V A +++ E + P+ D++ K+VG+++D D+ AL S++ +DN++
Sbjct: 20 VEKAAQLMSEHNVGSIPICDNN-KVVGVITDRDI-ALRSVAKG--SDNNI---------- 65
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
VGD+MT PVV + ++ DAAR++ E + RRLPV D + +VGI
Sbjct: 66 --------------KVGDIMTSNPVVANKDMDIHDAARIMSERQIRRLPVED-NQNIVGI 110
Query: 229 ITRGNVVRAALQIKHATE 246
++ G++ A++ KH E
Sbjct: 111 VSLGDI---AIEPKHENE 125
>gi|392410314|ref|YP_006446921.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
gi|390623450|gb|AFM24657.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
Length = 245
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 18/139 (12%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A+ + EK I+ PV++ KLVG+V+D DL +S S D+T E
Sbjct: 23 AINLSSEKNISIMPVLES-GKLVGIVTDRDL---KRVSPS-----------DATRLNVEE 67
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
++ LS+ VG +MTP P++V +E+ A +LL K +PVVD G ++G+IT+
Sbjct: 68 IKYRLSRVE---VGTIMTPHPIIVPPDYTIEETAEILLTNKISGVPVVDDKGTILGVITK 124
Query: 232 GNVVRAALQIKHATEMGAQ 250
++ +A + + + G Q
Sbjct: 125 NDLFKAMMSLTGLLKRGLQ 143
>gi|303246714|ref|ZP_07332992.1| protein of unknown function DUF190 [Desulfovibrio fructosovorans
JJ]
gi|302492054|gb|EFL51932.1| protein of unknown function DUF190 [Desulfovibrio fructosovorans
JJ]
Length = 412
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
+P +++LV VI+ D + G+++ D+L ++ + + ++ +
Sbjct: 130 LPVVMDMLVSHDNKAVLVIESDGSVAGIITGGDILMRGGMAARLSLQDILPEDIRKNER- 188
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
K +G+ G++MT V + + T+L DAA+L+ +RLPVVDA G+LVG+
Sbjct: 189 --------DKISGRTAGEVMTSPVVTINDRTSLRDAAQLMTGKGLKRLPVVDAAGELVGL 240
Query: 229 ITRGNVVRAA 238
++R +++RAA
Sbjct: 241 VSRVDILRAA 250
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 34/199 (17%)
Query: 57 SALRRSSAVFASGTLT-----------ANSAAPSSGV---YTVGDFMTTKEELHVVKPTT 102
L+R V A+G L A+ APS+ +T G F ++ + T
Sbjct: 223 KGLKRLPVVDAAGELVGLVSRVDILRAASDLAPSAQALPRFTAGLFQQARDVM-----IT 277
Query: 103 TVDEAFVPTALEILVEKRITGFP-----VIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V AF T L +V I P V+D D + G++ D DLL R +
Sbjct: 278 DVPTAFPDTPLHQVVAA-IVASPLRRAVVVDADKTVRGIILDSDLLR--------RCGPA 328
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
P + +F + ++ + G ++M P + + E L + + +L K +RL
Sbjct: 329 RKPGLIEALFSFGKPEETGACPTGS-AAEVMEPNVLTIHEDATLMEVLQKMLAAKVKRLV 387
Query: 218 VVDADGKLVGIITRGNVVR 236
VVD GKL+G++ R ++R
Sbjct: 388 VVDDAGKLLGMVDREAILR 406
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 84 TVGDFMTTKEELHVVKPTTTV-DEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
T G+ MT+ P T+ D + A +++ K + PV+D +LVGLVS D+
Sbjct: 195 TAGEVMTS--------PVVTINDRTSLRDAAQLMTGKGLKRLPVVDAAGELVGLVSRVDI 246
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
L RA + + P + + L + M+ D+ T P T L
Sbjct: 247 L---------RAASDLAPSAQALPRF---TAGLFQQARDVMITDVPTAFP-----DTPLH 289
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
++ + RR VVDAD + GII +++R
Sbjct: 290 QVVAAIVASPLRRAVVVDADKTVRGIILDSDLLR 323
>gi|116747758|ref|YP_844445.1| hypothetical protein Sfum_0309 [Syntrophobacter fumaroxidans MPOB]
gi|116696822|gb|ABK16010.1| CBS domain containing membrane protein [Syntrophobacter
fumaroxidans MPOB]
Length = 230
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 19/153 (12%)
Query: 99 KPTTTVDEA-FVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
K T++E + A+ ++ E +I PV+ KLVG+VSD DL RA S
Sbjct: 9 KTVVTIEEDDSMQHAMSLMKEHKIRMLPVVAR-GKLVGVVSDTDL---------KRASAS 58
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
D+T +E+ L+SK V D+MT P+ V + +E+ A LL+ K P
Sbjct: 59 -----DATTLDMHELLYLISKIK---VQDIMTKTPITVSQNFTVEETAELLMRKKISGCP 110
Query: 218 VVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
V+D DG +VG+ITR ++ + + + + G Q
Sbjct: 111 VLDDDGLVVGVITRDDLFKVLIMLSGLGKKGIQ 143
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 59 LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAF-VPTALEILV 117
L+R+SA A+ TL + V D MT K TV + F V E+L+
Sbjct: 52 LKRASASDAT-TLDMHELLYLISKIKVQDIMT--------KTPITVSQNFTVEETAELLM 102
Query: 118 EKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLL 176
K+I+G PV+DDD +VG+++ DL L +SG G+ + +V+ + + ++
Sbjct: 103 RKKISGCPVLDDDGLVVGVITRDDLFKVLIMLSGLGKKGIQLAFQVEDRSGSIKNITDVI 162
Query: 177 SKTNGKM 183
K +G++
Sbjct: 163 RKYDGRI 169
>gi|149179595|ref|ZP_01858119.1| CBS [Planctomyces maris DSM 8797]
gi|148841566|gb|EDL56005.1| CBS [Planctomyces maris DSM 8797]
Length = 147
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 34/154 (22%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MT+ P++TV EA ++V+ PV+DD LVG+V+D D+
Sbjct: 5 DVMTSNP--ACCSPSSTVQEAA-----SLMVDNDCGEIPVVDDSGALVGVVTDRDIACRC 57
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
G K++ + V ++MT +PV V ++++
Sbjct: 58 VAKG---------------------------KSSDQRVEEVMTSSPVTVTADASVDECCT 90
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+ + + RRLPVVD GK GI+ + ++ R+A +
Sbjct: 91 KMEDNQVRRLPVVDDKGKCCGIVAQADIARSAAE 124
>gi|153004316|ref|YP_001378641.1| hypothetical protein Anae109_1450 [Anaeromyxobacter sp. Fw109-5]
gi|152027889|gb|ABS25657.1| CBS domain containing protein [Anaeromyxobacter sp. Fw109-5]
Length = 144
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 76/157 (48%), Gaps = 25/157 (15%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVGD+MT P T D+A + A+ +L EK I PV+ KLVGLV++ LL
Sbjct: 7 TVGDWMTRN-------PITIGDDASIVEAIHLLREKNIRRLPVMKGG-KLVGLVTEKMLL 58
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
P ++ + E+ LLSKT V M P+P V+ T L +
Sbjct: 59 G-------------YMPAKATSLDQW-ELHYLLSKTP---VTAAMNPSPHAVKVGTPLSE 101
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
AA+LL + K + VVD G LVGI+T N + A +
Sbjct: 102 AAKLLHDRKLNGVIVVDDRGDLVGILTTTNALEALIH 138
>gi|424886817|ref|ZP_18310425.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393176168|gb|EJC76210.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 223
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 13/128 (10%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG---RADNSMFPEVDSTWKT 168
A +++ ++ ++G PV+D D ++G++S+ DL+ +S +AD + P D
Sbjct: 23 AAKLMSDQHVSGVPVVDHDGCVLGVISEGDLIRRTELSNGAFVLKADMGLGP--DDRANA 80
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
F K VGD+MTP PVV+ E L A L+ + +R+PV+ DGKLVGI
Sbjct: 81 F-------IKRCAWRVGDVMTPDPVVIDEEAPLFRVAVLMQDRGIKRIPVL-RDGKLVGI 132
Query: 229 ITRGNVVR 236
++R ++++
Sbjct: 133 VSRADLLQ 140
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V D+MT V + ++ AA+L+ + +PVVD DG ++G+I+ G+++R
Sbjct: 2 LVKDVMTTTVVTLSPDNSVRHAAKLMSDQHVSGVPVVDHDGCVLGVISEGDLIR 55
>gi|297560081|ref|YP_003679055.1| hypothetical protein Ndas_1108 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844529|gb|ADH66549.1| CBS domain containing membrane protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 221
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVGD MTT D+A + + ++ PV+D +++G+VS DLL
Sbjct: 4 TVGDLMTTS-------VLAARDDAGYKELAAFMRDHHVSAVPVVDGGHRVLGVVSTADLL 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
AD PE T + F E + K+ G +LMT V V T +
Sbjct: 57 L-------KLADPD--PEEGYTGEPFRERLARI-KSTGTTARELMTSPAVTVTAATAPRE 106
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
AA L+ +RRLPVVD DG+LVG++ R +++
Sbjct: 107 AAGLMRRHGFRRLPVVDGDGRLVGLVGRSDLL 138
>gi|156742804|ref|YP_001432933.1| hypothetical protein Rcas_2844 [Roseiflexus castenholzii DSM 13941]
gi|156234132|gb|ABU58915.1| CBS domain containing protein [Roseiflexus castenholzii DSM 13941]
Length = 428
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 88/164 (53%), Gaps = 14/164 (8%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDW 131
T+ + P TV D M+ ++ V+P T + +E+L+++ + PV+D +
Sbjct: 108 TSRAVGPFPAHLTVADIMS--RQVVSVRPDTPIA-----VIVELLIDRALRSAPVVDAEN 160
Query: 132 KLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPA 191
++VG+++D DLL G+ ++ E+ S + V+ L + + DLMTP
Sbjct: 161 RVVGIITDGDLLT----RGATELPLALQREL-SLAERAAAVEILAERPH--TAADLMTPD 213
Query: 192 PVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
PV + TT L +AA ++ + +R+PVVD +LVG+++R +++
Sbjct: 214 PVTLPMTTPLAEAAAIMADRGLKRIPVVDEQHRLVGMVSRYDLL 257
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 71/156 (45%), Gaps = 23/156 (14%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
+T D MT V P TT + A I+ ++ + PV+D+ +LVG+VS YDL
Sbjct: 204 HTAADLMTPDP---VTLPMTTP----LAEAAAIMADRGLKRIPVVDEQHRLVGMVSRYDL 256
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
L+ + R + P S + VGD+M VR T L
Sbjct: 257 LSTVAEGLRQRPAEPVVP----------------SGGAPQTVGDIMMTGIPTVRPDTPLA 300
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+ LLET RR+ VVD +VGII+ G+V+R A
Sbjct: 301 ETLDHLLETDKRRVVVVDEHHHVVGIISDGDVLRRA 336
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 73 ANSAAPSSGV-YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDW 131
A PS G TVGD M T + V+P T + E L+ L+E V+D+
Sbjct: 269 AEPVVPSGGAPQTVGDIMMTG--IPTVRPDTPLAET-----LDHLLETDKRRVVVVDEHH 321
Query: 132 KLVGLVSDYDLL---ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLM 188
+VG++SD D+L A SG+ RA + F L G+ D+M
Sbjct: 322 HVVGIISDGDVLRRAAKRVRSGALRALAAWF-------GGGARPPGLEVAAEGRTAADVM 374
Query: 189 TPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
T V + + +A RL++ K +R+PVVDAD + VG++ R V+ A
Sbjct: 375 TSPVVTLPADAPITEAVRLMMTHKIKRIPVVDADKRFVGMVGRAGVLAA 423
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 171 EVQKLLSKTNGKM-----VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
EV K S+ G V D+M+ V VR T + LL++ R PVVDA+ ++
Sbjct: 103 EVLKYTSRAVGPFPAHLTVADIMSRQVVSVRPDTPIAVIVELLIDRALRSAPVVDAENRV 162
Query: 226 VGIITRGNVV-RAALQIKHATE 246
VGIIT G+++ R A ++ A +
Sbjct: 163 VGIITDGDLLTRGATELPLALQ 184
>gi|297564600|ref|YP_003683572.1| hypothetical protein [Meiothermus silvanus DSM 9946]
gi|296849049|gb|ADH62064.1| CBS domain containing protein [Meiothermus silvanus DSM 9946]
Length = 181
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 16/151 (10%)
Query: 93 EELHVVKPTTT-VDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 151
+EL +P + +DE + A + ++E R+ G PV+++ KLVGL+ DLL
Sbjct: 22 KELMKTRPYSVRLDETLL-VAAQRMLEHRLGGLPVVNEAGKLVGLIEVDDLLP------- 73
Query: 152 GRADNSMFPEVDS-----TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA-A 205
R +N F EV++ W V+ + + K V M VV LE A
Sbjct: 74 -RPENVPFSEVEALRLFDEWVDPGSVESVYRQYQSKPVAAAMRTELAVVSPEDPLETALV 132
Query: 206 RLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
R++ + +YRR+ VVD G+LVG +TR + +R
Sbjct: 133 RMMQDRQYRRVLVVDEQGQLVGTLTRSDFLR 163
>gi|402850829|ref|ZP_10899015.1| hypothetical protein A33M_4252 [Rhodovulum sp. PH10]
gi|402498839|gb|EJW10565.1| hypothetical protein A33M_4252 [Rhodovulum sp. PH10]
Length = 240
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 20/154 (12%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MTT ++ PT TV + + L+E RI G PV+D+ +VG++ + DLL
Sbjct: 5 DIMTT--DVVTAAPTDTVHDVA-----KKLLEHRIGGLPVVDERSHVVGMIGENDLL--- 54
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLS----KTNGKMVGDLMTPAPVVVRETTNLE 202
R + S W F ++L+ K +G+ V D+M+ T +
Sbjct: 55 ------RRAETGTDHTRSGWLQFLLGHEVLAAEFVKEHGRRVSDVMSVEVATATPDTPVG 108
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+ ARLL + R+P+VDA +LVGI+T ++VR
Sbjct: 109 EIARLLERHRVTRVPIVDASYRLVGIVTCADLVR 142
>gi|336113964|ref|YP_004568731.1| hypothetical protein BCO26_1286 [Bacillus coagulans 2-6]
gi|335367394|gb|AEH53345.1| CBS domain containing membrane protein [Bacillus coagulans 2-6]
Length = 153
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 12/153 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFM ++ VK TT+ E L++L RI G PV+D + KL+G+VSD D++
Sbjct: 3 VKDFMI--RDVITVKKETTIREL-----LKVLAHHRIGGVPVVDAEGKLLGMVSDGDVIR 55
Query: 145 LDSISGSGRADNSMFPE-VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ R + V + + FNE KL + + + VR + E+
Sbjct: 56 F--LQPKARTVYDFYITIVVNEQEDFNE--KLAHSLDFPVEKIMKRRELYTVRPEDDFEN 111
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
A R+L + +++LPVV+ ++VG+I+RG+++R
Sbjct: 112 ALRILAKHHFKKLPVVNQADRVVGVISRGDIMR 144
>gi|126701088|ref|YP_001089985.1| hypothetical protein CD630_34650 [Clostridium difficile 630]
gi|254977089|ref|ZP_05273561.1| hypothetical protein CdifQC_17333 [Clostridium difficile QCD-66c26]
gi|255094417|ref|ZP_05323895.1| hypothetical protein CdifC_17436 [Clostridium difficile CIP 107932]
gi|255102674|ref|ZP_05331651.1| hypothetical protein CdifQCD-6_17826 [Clostridium difficile
QCD-63q42]
gi|255308495|ref|ZP_05352666.1| hypothetical protein CdifA_18036 [Clostridium difficile ATCC 43255]
gi|255316169|ref|ZP_05357752.1| hypothetical protein CdifQCD-7_17524 [Clostridium difficile
QCD-76w55]
gi|255518830|ref|ZP_05386506.1| hypothetical protein CdifQCD-_17063 [Clostridium difficile
QCD-97b34]
gi|255652009|ref|ZP_05398911.1| hypothetical protein CdifQCD_17625 [Clostridium difficile
QCD-37x79]
gi|255657419|ref|ZP_05402828.1| hypothetical protein CdifQCD-2_17366 [Clostridium difficile
QCD-23m63]
gi|260684984|ref|YP_003216269.1| hypothetical protein CD196_3255 [Clostridium difficile CD196]
gi|260688642|ref|YP_003219776.1| hypothetical protein CDR20291_3301 [Clostridium difficile R20291]
gi|296449015|ref|ZP_06890805.1| CBS domain protein [Clostridium difficile NAP08]
gi|296879838|ref|ZP_06903811.1| CBS domain protein [Clostridium difficile NAP07]
gi|306521751|ref|ZP_07408098.1| hypothetical protein CdifQ_19995 [Clostridium difficile QCD-32g58]
gi|384362658|ref|YP_006200510.1| hypothetical protein CDBI1_16945 [Clostridium difficile BI1]
gi|423080793|ref|ZP_17069410.1| CBS domain protein [Clostridium difficile 002-P50-2011]
gi|423087194|ref|ZP_17075583.1| CBS domain protein [Clostridium difficile 050-P50-2011]
gi|423090563|ref|ZP_17078852.1| CBS domain protein [Clostridium difficile 70-100-2010]
gi|115252525|emb|CAJ70368.1| conserved hypothetical protein [Clostridium difficile 630]
gi|260211147|emb|CBA66586.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260214659|emb|CBE07281.1| conserved hypothetical protein [Clostridium difficile R20291]
gi|296262108|gb|EFH08913.1| CBS domain protein [Clostridium difficile NAP08]
gi|296429127|gb|EFH15001.1| CBS domain protein [Clostridium difficile NAP07]
gi|357545132|gb|EHJ27112.1| CBS domain protein [Clostridium difficile 050-P50-2011]
gi|357552282|gb|EHJ34056.1| CBS domain protein [Clostridium difficile 002-P50-2011]
gi|357556267|gb|EHJ37882.1| CBS domain protein [Clostridium difficile 70-100-2010]
Length = 153
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
+L+ ++I G PV+D + ++VG++S+ D+L + + N + + +V+K
Sbjct: 29 MLIAEKIGGLPVVDSENRVVGIISETDILKKEKYIEAPLYINLLQGLI--FLDDLKKVEK 86
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
+ + VG+LM+ + V E +D A ++++ R+PVVD D KL GII R ++
Sbjct: 87 DIKQVAAYKVGELMSKDIIKVHEDDKFDDVANVMIKKSINRVPVVDDDNKLKGIICRYDI 146
Query: 235 VRA 237
++A
Sbjct: 147 IKA 149
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 35/55 (63%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
K ++MT +V ++ ++ D A +L+ K LPVVD++ ++VGII+ ++++
Sbjct: 4 KTAKEIMTTDVIVAKQDDSIADVANMLIAEKIGGLPVVDSENRVVGIISETDILK 58
>gi|13475518|ref|NP_107082.1| hypothetical protein mll6611 [Mesorhizobium loti MAFF303099]
gi|14026270|dbj|BAB52868.1| mll6611 [Mesorhizobium loti MAFF303099]
Length = 232
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 23/169 (13%)
Query: 99 KPTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
KP +D A + A +++ K+++G PVI +D +LVG+VS+ D L + G+ R +
Sbjct: 9 KPVVGIDPSASIAEAAGLMLSKKVSGLPVIRNDGRLVGIVSEGDFLRRGEL-GTERKRSR 67
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ + + +E + NG+ V ++M+ V +L L+ +R+P
Sbjct: 68 WLEFLVTPGRAADE----YVRANGRRVEEVMSQDVVTASPAASLAKVVELMTRRHVKRIP 123
Query: 218 VVDADGKLVGIITRGNVVRAAL--------------QIKH--ATEMGAQ 250
+ GK+VGIITR +++RA L QI+H ATE+ Q
Sbjct: 124 ATEG-GKVVGIITRSDLLRALLGVLPDGAATVIDDEQIRHNIATELAKQ 171
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 183 MVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
M + + PVV + + ++ +AA L+L K LPV+ DG+LVGI++ G+ +R
Sbjct: 1 MQAEAIMSKPVVGIDPSASIAEAAGLMLSKKVSGLPVIRNDGRLVGIVSEGDFLR 55
>gi|330468206|ref|YP_004405949.1| cbs domain-containing membrane protein [Verrucosispora maris
AB-18-032]
gi|328811177|gb|AEB45349.1| cbs domain containing membrane protein [Verrucosispora maris
AB-18-032]
Length = 233
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 17/148 (11%)
Query: 102 TTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 161
T V++ +++L E+R++ PV+DD ++G+VS+ DLL + G
Sbjct: 16 TVVEQTPYRQIVDLLAERRVSAVPVVDDFGHVLGVVSEADLLH--KVEWMGEPHER---- 69
Query: 162 VDSTWKTFNEVQKLLSKTNGKM--VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
+ F ++ S+ G+ +LMT V T+L AA+L+ + +RLPVV
Sbjct: 70 -----RVFEGARQRRSRRKGEADNARELMTTPAVTTSPHTSLVAAAKLMDREQVKRLPVV 124
Query: 220 DADGKLVGIITRGNVVRAALQ----IKH 243
D G++VGI+TR +++R L+ I+H
Sbjct: 125 DDMGRVVGIVTRSDLLRVHLRPDADIRH 152
>gi|116753803|ref|YP_842921.1| signal transduction protein [Methanosaeta thermophila PT]
gi|116665254|gb|ABK14281.1| putative signal transduction protein with CBS domains [Methanosaeta
thermophila PT]
Length = 158
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 17/137 (12%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
+ A +L E RI+G PV+D D +LVG++S+ DLL L S D+ + S ++
Sbjct: 20 IAEAARLLRENRISGMPVLDGD-ELVGVISESDLLRLLSTE-----DDRGGLWLPSPFEI 73
Query: 169 FN----------EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
F +++ L + V D+M+ P+ V ++E+AA ++ + + RLPV
Sbjct: 74 FEIPVRDVIRWERMKRSLDEITKMRVADVMSRKPITVSPDASIEEAAAIMTKHRINRLPV 133
Query: 219 VDADGKLVGIITRGNVV 235
V+ +LVGI+TRG+++
Sbjct: 134 VEG-SRLVGIVTRGDII 149
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V D+M PV + + + +AARLL E + +PV+D D +LVG+I+ +++R
Sbjct: 2 LVKDIMNRNPVSCQASDPIAEAARLLRENRISGMPVLDGD-ELVGVISESDLLR 54
>gi|301064566|ref|ZP_07204962.1| CBS domain protein [delta proteobacterium NaphS2]
gi|300441314|gb|EFK05683.1| CBS domain protein [delta proteobacterium NaphS2]
Length = 149
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 24/160 (15%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MTT E+ VK T + E EIL + RI G PV+DD+ L+G++ + DL+
Sbjct: 6 DIMTT--EVITVKKETPLKEL-----AEILYKNRINGVPVVDDEGLLIGIICESDLV--- 55
Query: 147 SISGSGRADNSM-FPEV----DSTW--KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 199
R D + P V D+ + ++ ++K + + N V +L + V V E T
Sbjct: 56 ------RKDKKLHIPTVVALFDAVFYLESSKNIEKEIKRINATTVEELFSRKVVTVDEKT 109
Query: 200 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
+++ A ++ + K +PV+D + ++VG+I +G+V+R L
Sbjct: 110 PIDEIATIMTQKKVYTIPVMDGN-RMVGVIGKGDVIRTLL 148
>gi|124028010|ref|YP_001013330.1| hypothetical protein Hbut_1148 [Hyperthermus butylicus DSM 5456]
gi|123978704|gb|ABM80985.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
Length = 283
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 31/155 (20%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
+ V D+M+T VV T D A V +++ RI VID+ K VG+V+ D
Sbjct: 5 FRVSDYMSTP----VVVVTPHSDLAHV---RRLMLRYRIGRVVVIDEAEKPVGIVTMSDF 57
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
+ L + S + P V+ V D+MT PV +R+ +L
Sbjct: 58 VRLVAERFSSK------PLVNIA------------------VADIMTRDPVTIRDNRSLR 93
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+AARL+++ LPVVD DGKLVGIIT+ ++VRA
Sbjct: 94 EAARLMIKHGVSGLPVVDEDGKLVGIITKSDIVRA 128
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 106/266 (39%), Gaps = 78/266 (29%)
Query: 48 VLATSSDRVSALRRSSAVFASG-TLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDE 106
V+ T ++ +RR + G + + A G+ T+ DF+ E KP +
Sbjct: 16 VVVTPHSDLAHVRRLMLRYRIGRVVVIDEAEKPVGIVTMSDFVRLVAERFSSKPLVNIAV 75
Query: 107 AFVPT--------------ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL--DSISG 150
A + T A ++++ ++G PV+D+D KLVG+++ D++ + + G
Sbjct: 76 ADIMTRDPVTIRDNRSLREAARLMIKHGVSGLPVVDEDGKLVGIITKSDIVRAFAEKLRG 135
Query: 151 SGRADNSM---FPEVDSTWKTFNEVQKL-------------------------------- 175
+ + M FP+ + W + V L
Sbjct: 136 KFKVRDYMEADFPDA-TPWHSIYYVADLLYNSPVKRVLVVEGERLLGIIAPSDIAFLSEL 194
Query: 176 --LSKT------------NGKM----------VGDLMTPAPVVVRETTNLEDAARLLLET 211
L+KT G+M D+MTP+PV + +L AA+L+L
Sbjct: 195 PMLAKTRIKPIRRFAELPKGRMGPVYSYVMLTAQDVMTPSPVTIGPDEDLALAAQLMLRH 254
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRA 237
+ +PVV+ D VGI+ + N+++A
Sbjct: 255 GFSSVPVVE-DETPVGIVVKHNILKA 279
>gi|322690887|ref|YP_004220457.1| transport protein [Bifidobacterium longum subsp. longum JCM 1217]
gi|320455743|dbj|BAJ66365.1| putative transport protein [Bifidobacterium longum subsp. longum
JCM 1217]
Length = 683
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ + +LVG VSD D++ S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGNGRLVGFVSDGDVMK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
>gi|326781239|ref|ZP_08240504.1| CBS domain containing membrane protein [Streptomyces griseus
XylebKG-1]
gi|326661572|gb|EGE46418.1| CBS domain containing membrane protein [Streptomyces griseus
XylebKG-1]
Length = 207
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
+TV D M+ P A +E++ E +++ PV+ + ++VG+VS+ DL
Sbjct: 6 HTVSDVMSHT-------PVAVGSHASYRQVVELMSESKVSALPVLAGEGRVVGVVSEADL 58
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
L ++ G + ++D +K +V DLM+ V V +
Sbjct: 59 LPKEAFREGGPPAAA---QLDEAFKA-----------AAVLVEDLMSSPAVTVHPDAPIA 104
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+AAR++ +RLPVV+++G L G+++RG++++ L+
Sbjct: 105 EAARIMARKHVKRLPVVNSEGLLEGVVSRGDLLKVFLR 142
>gi|300728337|ref|ZP_07061702.1| inosine-5'-monophosphate dehydrogenase [Prevotella bryantii B14]
gi|299774402|gb|EFI71029.1| inosine-5'-monophosphate dehydrogenase [Prevotella bryantii B14]
Length = 494
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 33/142 (23%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
+ P T V AL+++ E I G PV+D+D LVG+V++ DL R +
Sbjct: 99 IYDPVTIQRGRTVKDALDMMAEYHIGGIPVVDEDNHLVGIVTNRDL----------RFER 148
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRR 215
M ++D D+MT +V + T+L AA++L E K +
Sbjct: 149 RMDRKID----------------------DVMTKENLVTTHQQTDLLAAAQILQENKIEK 186
Query: 216 LPVVDADGKLVGIITRGNVVRA 237
LPVVDA+ LVG+IT ++ +A
Sbjct: 187 LPVVDAENHLVGLITYKDITKA 208
>gi|419849921|ref|ZP_14372942.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 35B]
gi|419853424|ref|ZP_14376246.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 2-2B]
gi|386407953|gb|EIJ22897.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 2-2B]
gi|386410650|gb|EIJ25427.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 35B]
Length = 683
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P + +D + + + ++ PV++ + +LVG VSD D++ S + ++
Sbjct: 536 QPYSCLDSDDITHVVREFIRLNVSSLPVVNGNGRLVGFVSDGDVMK----SIATYESRTV 591
Query: 159 FPEVDSTWKTFNE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
ST F++ V + +GK V D+ T V ++ + AR+L + ++++L
Sbjct: 592 STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL 651
Query: 217 PVVDADGKLVGIITRGNVVRAAL 239
PVVD DG+LVG+I R +V+ A
Sbjct: 652 PVVDGDGRLVGVIRRKSVMEHAF 674
>gi|365885833|ref|ZP_09424817.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365285444|emb|CCD97348.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 242
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 74/137 (54%), Gaps = 7/137 (5%)
Query: 101 TTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 160
T T D V A I++++ ++G PV+D KLVG+VS+ D + I G+GR
Sbjct: 13 TVTPDTPIVDAA-NIMLQRHVSGLPVVDATGKLVGVVSEGDFIRRTEI-GTGRKRGRWLR 70
Query: 161 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 220
+ K+ + +G+ V ++MT +P+ + E L + ++ + +RLPVV
Sbjct: 71 FILGPGKSAAD----FVHEHGRKVAEVMTKSPLTITEDAALAEIVEIMEKNHVKRLPVVK 126
Query: 221 ADGKLVGIITRGNVVRA 237
+ ++VGI++R N+++A
Sbjct: 127 GE-QVVGIVSRANLLQA 142
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+MT + V T + DAA ++L+ LPVVDA GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVTPDTPIVDAANIMLQRHVSGLPVVDATGKLVGVVSEGDFIR 55
>gi|217977212|ref|YP_002361359.1| hypothetical protein Msil_1028 [Methylocella silvestris BL2]
gi|217502588|gb|ACK49997.1| CBS domain containing membrane protein [Methylocella silvestris
BL2]
Length = 226
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 74/133 (55%), Gaps = 14/133 (10%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW-- 166
+ A+ +LV+ ++ PV+D D ++VG++S+ DLL + D + P S W
Sbjct: 20 IAAAVRLLVDHDVSALPVVDADGRVVGVLSEADLLFREE-------DGTAQPH--SWWVE 70
Query: 167 --KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 224
+ + + +K +G+ V ++M+ + +L D A LL + + +R+P++ DGK
Sbjct: 71 ALTPASILAQQFAKEHGRKVSEVMSSEVISAPADASLADIAHLLEKRRIKRVPII-TDGK 129
Query: 225 LVGIITRGNVVRA 237
LVGI++R N+++A
Sbjct: 130 LVGIVSRSNIMQA 142
>gi|389851878|ref|YP_006354112.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. ST04]
gi|388249184|gb|AFK22037.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. ST04]
Length = 485
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 36/145 (24%)
Query: 92 KEELHVVKPTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 150
K E +V+ T+ E V AL ++ + I G PV++D K+VG++S D+ A +
Sbjct: 94 KAERFIVEDVITISPEETVEFALFLMEKHDIDGLPVVED-GKVVGIISKKDIAARE---- 148
Query: 151 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 210
GK+V DLMT + V E ++E+A ++++E
Sbjct: 149 ------------------------------GKLVKDLMTKEVITVPECVDVEEALKIMIE 178
Query: 211 TKYRRLPVVDADGKLVGIITRGNVV 235
+ RLPVV+ +GKLVG+IT ++V
Sbjct: 179 NRIDRLPVVNKEGKLVGLITMSDLV 203
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAF-VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
V D MT K TV E V AL+I++E RI PV++ + KLVGL++ DL+
Sbjct: 152 VKDLMT--------KEVITVPECVDVEEALKIMIENRIDRLPVVNKEGKLVGLITMSDLV 203
Query: 144 ALDSISGSGRADNS 157
A + R +N
Sbjct: 204 ARKKYKNAVRDENG 217
>gi|330806493|ref|XP_003291203.1| hypothetical protein DICPUDRAFT_95316 [Dictyostelium purpureum]
gi|325078625|gb|EGC32266.1| hypothetical protein DICPUDRAFT_95316 [Dictyostelium purpureum]
Length = 147
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 24/158 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL-L 143
V MT+K L+ + +T+D AL+ L I PV+D+D L G+V+D DL L
Sbjct: 5 VRQLMTSKC-LYTISMDSTLD-----VALKSLNANSIHRLPVVDNDGNLKGIVTDRDLRL 58
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
A DS + F ++ + K V +M PV + + + + D
Sbjct: 59 A-----------------TDSPFIQFETNEERMEKLKQHKVSSIMKQNPVTIEDYSPVVD 101
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
AA+L+ + LPVVD +GKL+G++TR +++ ++I
Sbjct: 102 AAKLMRVSNVGGLPVVDKNGKLIGMVTRSDLLDCLIKI 139
>gi|307104771|gb|EFN53023.1| hypothetical protein CHLNCDRAFT_59753 [Chlorella variabilis]
Length = 209
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 35/120 (29%)
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
I G PV+D D KLVG+VS DL
Sbjct: 109 IEGMPVVDGDNKLVGVVSRKDL-----------------------------------AKG 133
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
G +V D+M+ PV ++ + + DAA ++++ K+ R+PVVD D VGI+TR ++ A Q
Sbjct: 134 GALVQDIMSSTPVSLKASGKVADAAEIMIKHKFHRVPVVDDDNTCVGIVTRSDIFWALTQ 193
>gi|294496296|ref|YP_003542789.1| XRE family transcriptional regulator [Methanohalophilus mahii DSM
5219]
gi|292667295|gb|ADE37144.1| putative transcriptional regulator, XRE family [Methanohalophilus
mahii DSM 5219]
Length = 154
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD-NSMFPEVDS 164
E V A L + I+G PV+D+ +VG++S+ DLLAL I G S F ++
Sbjct: 17 EDKVSDAARSLKDNDISGMPVVDNG-NIVGILSEVDLLALLEIPEHGDFWLPSPFEVIEI 75
Query: 165 TWKTF---NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 221
+ F + +K+LS V +M V ++EDA+ L+ K RLPVV+
Sbjct: 76 PIREFISWEDTKKMLSDVGSMPVSKIMRYGVFTVSPEDSIEDASHLMSRHKINRLPVVEN 135
Query: 222 DGKLVGIITRGNVVRA 237
D KL GIITRG+++R
Sbjct: 136 D-KLTGIITRGDIIRG 150
>gi|339301021|ref|ZP_08650145.1| CBS domain protein [Streptococcus agalactiae ATCC 13813]
gi|417005963|ref|ZP_11944533.1| CBS domain-containing protein [Streptococcus agalactiae FSL S3-026]
gi|319745547|gb|EFV97849.1| CBS domain protein [Streptococcus agalactiae ATCC 13813]
gi|341576144|gb|EGS26555.1| CBS domain-containing protein [Streptococcus agalactiae FSL S3-026]
Length = 219
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 81/157 (51%), Gaps = 26/157 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K L V P TTV EA ++L E + PV+++D +LVGLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEA-----ADLLREHHLRRLPVVEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S +T + E+ LL+KT + D+M V V + +LEDA
Sbjct: 50 ----GTMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
L++ K LPVVD +G+L GIIT +V +A L+I
Sbjct: 98 IYLMMSRKIGVLPVVD-NGQLYGIITDRDVFKAFLEI 133
>gi|336323149|ref|YP_004603116.1| hypothetical protein Flexsi_0886 [Flexistipes sinusarabici DSM
4947]
gi|336106730|gb|AEI14548.1| CBS domain containing membrane protein [Flexistipes sinusarabici
DSM 4947]
Length = 140
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 20/124 (16%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV--DSTWKTFNEVQ 173
L +K +TG PV++ D ++VG+ S+ D+L + P++ D+ +VQ
Sbjct: 29 LRKKNLTGLPVLNKDGEVVGVFSESDVL-------------NQLPDILNDADKIPLVDVQ 75
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
+L + V ++M P+ V NL+D A++ LE R+PVVD +GKLVGI++ G+
Sbjct: 76 ELTNPP----VKNVMGKPPITVTPEHNLKDVAKIFLENYIHRVPVVD-NGKLVGIVSLGD 130
Query: 234 VVRA 237
+++A
Sbjct: 131 LLKA 134
>gi|289767041|ref|ZP_06526419.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|289697240|gb|EFD64669.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 218
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
+L+E IT PV+D++ + VG+VS+ DLL + G G D S + W +
Sbjct: 23 HLLLEYDITAVPVVDEENRPVGVVSEADLL--QKMWG-GEPDGSAE---HAEWSRASA-- 74
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
K + LMT P+ E+ ++ DA R++ + +RL VVD DG+L G+++R +
Sbjct: 75 ---GKADATDAAGLMTSPPLCALESWSVVDAVRVMARHRIKRLLVVDGDGRLAGVVSRSD 131
Query: 234 VVRAALQIKHA 244
++R L+ A
Sbjct: 132 LLRVFLRTDRA 142
>gi|399040053|ref|ZP_10735507.1| CBS-domain-containing membrane protein [Rhizobium sp. CF122]
gi|398061938|gb|EJL53724.1| CBS-domain-containing membrane protein [Rhizobium sp. CF122]
Length = 223
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS--MFPEVDSTW 166
V A+ ++++ I+G PV+DD+ + G++++ DLL I + R+ S E+D
Sbjct: 20 VRHAVAVMIQNNISGLPVVDDESLVCGMLTEGDLLLRREIRLAPRSVRSAEFISEID--- 76
Query: 167 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 226
+++ + ++G V D+M+ +V R + + D A L + +RLP+V+ DG+LV
Sbjct: 77 -----LERYIC-SHGWCVADVMSQDVIVARPDSEVSDIAESLQAHRIKRLPIVE-DGRLV 129
Query: 227 GIITRGNVVRAALQ 240
GI++R +++R ++
Sbjct: 130 GIVSRRDILRIIVE 143
>gi|453049496|gb|EME97086.1| putative CBS domain-containing protein [Streptomyces mobaraensis
NBRC 13819 = DSM 40847]
Length = 228
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 12/163 (7%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVS 138
S G TVGD MT + + V + A ++ L E R+ PV+ + ++VG+VS
Sbjct: 5 SHGPRTVGDVMT-RTVVAVGR------RAVYKEIVKTLAEWRVGTVPVLAGEGRVVGVVS 57
Query: 139 DYDLLALDSISGS-GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 197
DLL+ + GR V + L+K + DLM+ V VR
Sbjct: 58 RADLLSREEFRDEPGREVEG----VGAAVALGRHGADGLAKAAARTAEDLMSAPAVTVRG 113
Query: 198 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+ +AAR++ + + LPVVDA+G+L GI++RG+++ L+
Sbjct: 114 DATVAEAARIMARARVKTLPVVDAEGRLAGIVSRGDLLTVYLR 156
>gi|374287258|ref|YP_005034343.1| hypothetical protein BMS_0457 [Bacteriovorax marinus SJ]
gi|301165799|emb|CBW25371.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 153
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 75/138 (54%), Gaps = 6/138 (4%)
Query: 105 DEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD-SISGSGRADNSMFPEVD 163
+E V A +I+ +K + PV+D LVG++++ D + D +I + + +F +
Sbjct: 20 EENTVEEAAKIMHDKGFSVMPVVDGAGALVGILTESDFVGTDANIPHALASIKKLFGQ-- 77
Query: 164 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 223
F++ +++ K+ K +G++MT V +L D ++ +RLPVVD G
Sbjct: 78 --NFYFSDAEEIYKKSKAKKLGEVMTKDVTTVTSDQSLSDVISVMSHNHLKRLPVVDG-G 134
Query: 224 KLVGIITRGNVVRAALQI 241
KLVGIITR ++++A ++
Sbjct: 135 KLVGIITRKDLLKAYTKL 152
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 243
V + MT + E +E+AA+++ + + +PVVD G LVGI+T + V I H
Sbjct: 7 VSEFMTKDVISCTEENTVEEAAKIMHDKGFSVMPVVDGAGALVGILTESDFVGTDANIPH 66
Query: 244 A 244
A
Sbjct: 67 A 67
>gi|338731014|ref|YP_004660406.1| putative signal transduction protein with CBS domains [Thermotoga
thermarum DSM 5069]
gi|335365365|gb|AEH51310.1| putative signal transduction protein with CBS domains [Thermotoga
thermarum DSM 5069]
Length = 148
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 15/155 (9%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL- 143
V D M +L V P T++ L+I+ + ++G PV+ +D +++G + + D++
Sbjct: 3 VSDVMV--RDLTAVTPDETIE-----NVLKIMSSQLLSGVPVVSEDMRVIGFIGEDDIVK 55
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
A+ S S P+++ +K N ++ K V M +VV E NL
Sbjct: 56 AVVPGYFSLLQSASFLPDINQLFKNLNLIKD-------KPVSQFMRSPALVVNENANLMH 108
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
A L+++ R + VVD G+LVG++ R N+++A
Sbjct: 109 VADLMIKNNVRVIAVVDDFGRLVGVVNRMNILQAV 143
>gi|295681503|ref|YP_003610077.1| XRE family transcriptional regulator [Burkholderia sp. CCGE1002]
gi|295441398|gb|ADG20566.1| putative transcriptional regulator, XRE family [Burkholderia sp.
CCGE1002]
Length = 229
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 12/151 (7%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MTT ++ + P ++V +A ++L + +I+G PV+DD ++G+VS+ DLL
Sbjct: 5 DIMTT--QVVSIAPDSSVYDAA-----KLLADSKISGMPVLDDTGSVIGIVSEGDLLRRV 57
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
+G+ S + + + V+ L K V D+M+ V V E+ L A
Sbjct: 58 E-TGTETPRRSWLAQFIAPTRQLA-VEYL--KERSIRVRDVMSAPAVTVDESAPLTAVAE 113
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
LL +RLPV+ DGKLVGI++R N+VRA
Sbjct: 114 LLGRKHIKRLPVL-RDGKLVGIVSRANLVRA 143
>gi|282859613|ref|ZP_06268716.1| inosine-5'-monophosphate dehydrogenase [Prevotella bivia
JCVIHMP010]
gi|424899660|ref|ZP_18323202.1| inosine-5''-monophosphate dehydrogenase [Prevotella bivia DSM
20514]
gi|282587616|gb|EFB92818.1| inosine-5'-monophosphate dehydrogenase [Prevotella bivia
JCVIHMP010]
gi|388591860|gb|EIM32099.1| inosine-5''-monophosphate dehydrogenase [Prevotella bivia DSM
20514]
Length = 494
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 31/141 (21%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
+ P T + V AL ++ E I G PV+DDD LVG+V++ DL R +
Sbjct: 99 IYDPVTIRRGSTVRDALAMMAEYHIGGIPVVDDDNHLVGIVTNRDL----------RFER 148
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
+ +D + N V + TNL +AA +L E K +L
Sbjct: 149 RLDKSIDEVMTSEN---------------------LVTTHQKTNLAEAADILQENKIEKL 187
Query: 217 PVVDADGKLVGIITRGNVVRA 237
PVVD + LVG+IT ++ +A
Sbjct: 188 PVVDNNNHLVGLITYKDITKA 208
>gi|347733998|ref|ZP_08867051.1| CBS domain pair family protein [Desulfovibrio sp. A2]
gi|347517235|gb|EGY24427.1| CBS domain pair family protein [Desulfovibrio sp. A2]
Length = 223
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A +IL E RI PV+D + +L+G+VSD D+ A S +D +E
Sbjct: 23 ASKILKENRIRRLPVVDAEGRLIGIVSDRDI---------KEASPSKATTLD-----MHE 68
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+ LLS+ V D+MT P VR +E A ++E + LPV+D GKLVGII+
Sbjct: 69 LYYLLSEIK---VKDIMTRDPFTVRADDTVETVALNMIEKRIGGLPVIDDGGKLVGIISD 125
Query: 232 GNVVRAALQIKHATEMGAQ 250
+V + + I G Q
Sbjct: 126 SDVFKVLITITGVRHGGVQ 144
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
++EKRI G PVIDD KLVG++SD D+ L +I+G E+++T T +
Sbjct: 102 MIEKRIGGLPVIDDGGKLVGIISDSDVFKVLITITGVRHGGVQFAFELENTPGTLKPIVD 161
Query: 175 LLSKTNGKMV 184
L + N +++
Sbjct: 162 TLREHNARII 171
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 38/56 (67%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
++ + MT + V T++ A+++L E + RRLPVVDA+G+L+GI++ ++ A+
Sbjct: 2 LIREWMTKDVITVTPDTSMMKASKILKENRIRRLPVVDAEGRLIGIVSDRDIKEAS 57
>gi|111025031|ref|YP_707451.1| hypothetical protein RHA1_ro08249 [Rhodococcus jostii RHA1]
gi|110824010|gb|ABG99293.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 183
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 31/140 (22%)
Query: 111 TALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 170
TA +L E PV+DD +LVG+++ D+L RA
Sbjct: 20 TAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVL---------RA---------------- 54
Query: 171 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+T + VG++MT V L D +++LL+ R LPVVD DG++VGI++
Sbjct: 55 ------GQTCSETVGEVMTAPAVAAPMYHYLADVSQMLLQQGLRSLPVVDIDGRVVGILS 108
Query: 231 RGNVVRAALQIKHATEMGAQ 250
R +VVR L+ +GAQ
Sbjct: 109 RSDVVRLMLKPDETIAVGAQ 128
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 194 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
VVR++ ++ AA LL E + +PVVD +LVG++ G+V+RA
Sbjct: 11 VVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVLRAG 55
>gi|237653620|ref|YP_002889934.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
gi|237624867|gb|ACR01557.1| putative signal transduction protein with CBS domains [Thauera sp.
MZ1T]
Length = 217
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 70/142 (49%), Gaps = 23/142 (16%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 148
+ T+E LHV P EA EI+ K++ PVID D K++G++S D+
Sbjct: 6 IMTREVLHV-GP-----EASFSQVSEIMRLKKVRHVPVIDQDRKVLGIISHRDV------ 53
Query: 149 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 208
RA SM +D EV+ LLSK D+M + V T +E+AAR++
Sbjct: 54 ---QRAQPSMITTLD-----VGEVKYLLSKITA---ADIMHKSVVSCSPRTQIEEAARMM 102
Query: 209 LETKYRRLPVVDADGKLVGIIT 230
K L VVD G+LVGI+T
Sbjct: 103 RPKKLGCLVVVDDAGRLVGIVT 124
>gi|269218898|ref|ZP_06162752.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
848 str. F0332]
gi|269212009|gb|EEZ78349.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
848 str. F0332]
Length = 500
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 32/146 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E V P T EA + + + RI+G PV+D D KL+G++++ DL
Sbjct: 93 ESGMVHDPATIGPEATIAELDALCAKYRISGLPVVDGDDKLLGIITNRDL---------- 142
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV--RETTNLEDAARLLLE 210
PE + +T E MTP P+V R+ E+AARLL +
Sbjct: 143 ----RFIPESEFAVRTVRET---------------MTPMPLVTAGRDVPQ-EEAARLLAQ 182
Query: 211 TKYRRLPVVDADGKLVGIITRGNVVR 236
K +LP++D +G+L G+IT + V+
Sbjct: 183 HKIEKLPLIDGEGRLTGLITVKDFVK 208
>gi|421601459|ref|ZP_16044253.1| hypothetical protein BCCGELA001_25469 [Bradyrhizobium sp.
CCGE-LA001]
gi|404266431|gb|EJZ31317.1| hypothetical protein BCCGELA001_25469 [Bradyrhizobium sp.
CCGE-LA001]
Length = 242
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 11/140 (7%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P T++ EA I++++ ++G V+D+ +LVG+VS+ D + I G+GR
Sbjct: 14 VTPDTSIVEA-----ANIMLKRHVSGLTVVDETGRLVGIVSEGDFIRRSEI-GTGRKRGR 67
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ K+ ++ +G+ V ++MT + V + E T L + L+ +RLP
Sbjct: 68 WLRFILGPGKSASD----FVHEHGRRVSEVMTESVVTITEDTALAEIVDLMERNNVKRLP 123
Query: 218 VVDADGKLVGIITRGNVVRA 237
VV D K+VGI++R N+++A
Sbjct: 124 VVRGD-KVVGIVSRANLLQA 142
>gi|337270486|ref|YP_004614541.1| putative signal transduction protein with CBS domains
[Mesorhizobium opportunistum WSM2075]
gi|336030796|gb|AEH90447.1| putative signal transduction protein with CBS domains
[Mesorhizobium opportunistum WSM2075]
Length = 232
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 7/139 (5%)
Query: 100 PTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P VD A V A +++ +I+G PVI +D +L+G+VS+ D L + G+ R
Sbjct: 10 PVIAVDPSASVADAAALMLANKISGLPVIRNDGELMGIVSEGDFLRRREL-GTQRKRPRW 68
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
+ S K E NG+ + ++M+ + V TT+L L+ R+PV
Sbjct: 69 LEFLISPGKAAEE----YVLANGRRIEEVMSESVVTASPTTSLATVVELMTRHHVNRIPV 124
Query: 219 VDADGKLVGIITRGNVVRA 237
+ A+GK+VGI+TR ++VRA
Sbjct: 125 L-AEGKVVGIVTRSDLVRA 142
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+MT + V + ++ DAA L+L K LPV+ DG+L+GI++ G+ +R
Sbjct: 6 IMTTPVIAVDPSASVADAAALMLANKISGLPVIRNDGELMGIVSEGDFLR 55
>gi|288929624|ref|ZP_06423468.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
317 str. F0108]
gi|288329129|gb|EFC67716.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
317 str. F0108]
Length = 494
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 43/173 (24%)
Query: 77 APSSGVYTVGDFMTTKEELH---VVK---------PTTTVDEAFVPTALEILVEKRITGF 124
A G+ + M+ +E+ H VVK P T V AL+++ + I G
Sbjct: 67 AREGGIGVIHKNMSIEEQAHEVAVVKRAENGMIYDPVTIRRGRTVKDALDMMRDYHIGGI 126
Query: 125 PVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 184
PV+D+D LVG+V++ DL R ++ + ++D + N
Sbjct: 127 PVVDEDNCLVGIVTNRDL----------RFEHRLDKKIDEVMTSEN-------------- 162
Query: 185 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
VV + T+L AA++L E K +LPVVDA+ ++VG+IT ++ +A
Sbjct: 163 -------LVVTHQQTDLAAAAQILQENKIEKLPVVDANNRIVGLITYKDITKA 208
>gi|15644106|ref|NP_229155.1| inosine-5-monophosphate dehydrogenase-related protein [Thermotoga
maritima MSB8]
gi|148270558|ref|YP_001245018.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga petrophila RKU-1]
gi|170289264|ref|YP_001739502.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga sp. RQ2]
gi|418045411|ref|ZP_12683506.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga maritima MSB8]
gi|4981914|gb|AAD36425.1|AE001789_10 inosine-5-monophosphate dehydrogenase-related protein [Thermotoga
maritima MSB8]
gi|147736102|gb|ABQ47442.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga petrophila RKU-1]
gi|170176767|gb|ACB09819.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga sp. RQ2]
gi|351676296|gb|EHA59449.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga maritima MSB8]
Length = 321
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 29/122 (23%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
EI+ KRI+G PV+DD ++VG+VS D++ ++ GS D+ V+
Sbjct: 40 EIMRIKRISGVPVVDDKKRVVGIVSLEDIIK--ALEGSYIKDS---------------VE 82
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
K MT V ++ET L+DA + + Y R PVVD +GKLVGI+T+ +
Sbjct: 83 K------------RMTKNVVCLKETDTLQDAVKTFEKYGYGRFPVVDDEGKLVGIVTKHD 130
Query: 234 VV 235
++
Sbjct: 131 II 132
>gi|357414748|ref|YP_004926484.1| hypothetical protein Sfla_5572 [Streptomyces flavogriseus ATCC
33331]
gi|320012117|gb|ADW06967.1| CBS domain containing membrane protein [Streptomyces flavogriseus
ATCC 33331]
Length = 224
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 37/166 (22%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDY 140
G TV D MT + V+ TT E +L E +T PV+D+ + VG+VS+
Sbjct: 2 GHLTVADLMTPS--VISVQRGTTFKEIA-----RLLSESNVTAVPVVDEGGRPVGVVSEA 54
Query: 141 DLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
DLL S G+ A G LM+ V N
Sbjct: 55 DLLRNRSTGGARDA------------------------------GALMSHPAVTAEPRWN 84
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
+ AAR++ E + +RLPVVDA G+LVG+++R ++VR L+ A +
Sbjct: 85 VVHAARVMEEHRVKRLPVVDAAGRLVGVLSRSDLVRVFLRRDRAIQ 130
>gi|386819034|ref|ZP_10106250.1| putative transcriptional regulator, contains C-terminal CBS domains
[Joostella marina DSM 19592]
gi|386424140|gb|EIJ37970.1| putative transcriptional regulator, contains C-terminal CBS domains
[Joostella marina DSM 19592]
Length = 153
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 31/157 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MT + L + KP ++ E +E+ ++ RI+G PV D++ LVG++S+ D
Sbjct: 23 VEDYMT--KNLVLFKPDQSILEV-----MELFLKHRISGGPVCDENGHLVGIISEAD--C 73
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ IS S + FN +L K V + MT + N+ DA
Sbjct: 74 MKQISES---------------RYFN--MPILDKN----VENFMTRDVETIPHDMNIFDA 112
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
A + RRLPV+D GKLVG I+R ++V AAL++
Sbjct: 113 ASRFYKGHRRRLPVMDH-GKLVGQISRKDIVVAALKL 148
>gi|398787517|ref|ZP_10549911.1| CBS domain containing membrane protein [Streptomyces auratus
AGR0001]
gi|396992876|gb|EJJ03965.1| CBS domain containing membrane protein [Streptomyces auratus
AGR0001]
Length = 202
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 29/132 (21%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
+L E IT PV+D+D ++VG+VS+ DLL ++
Sbjct: 24 LLDEYEITAVPVVDEDEQVVGVVSEADLL-----------------------------RR 54
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
++K +MT VV R ++ +AA+L+ + K +RLPV+D G+L+G+I+R ++
Sbjct: 55 QIAKLGSTTAEAIMTSPAVVARPGWSVVEAAKLMEQKKVKRLPVIDDAGRLIGVISRSDL 114
Query: 235 VRAALQIKHATE 246
VR L+ A +
Sbjct: 115 VRLFLRRDRAIQ 126
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+ DLMTP VVV+ T ++ ARLL E + +PVVD D ++VG+++ +++R
Sbjct: 1 MADLMTPHAVVVQRGTTFKEIARLLDEYEITAVPVVDEDEQVVGVVSEADLLR 53
>gi|421451733|ref|ZP_15901094.1| Acetoin utilization acuB protein [Streptococcus salivarius K12]
gi|400182164|gb|EJO16426.1| Acetoin utilization acuB protein [Streptococcus salivarius K12]
Length = 219
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGLV++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTV-----AAAADIMRDKGLRRLPVIEHD-KLVGLVTEGTM-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S +T + E+ LL+KT VGD+M + V + +LEDA
Sbjct: 53 -------AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
++L+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 98 IYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDE-AFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
VGD M +K TV + A + A+ I+++ ++ PV+D+D ++ G+++D D+
Sbjct: 77 VGDIM--------IKNVLTVSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVF 127
Query: 144 -ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
A ISG G+A + EV T + ++ L++ N
Sbjct: 128 RAFLEISGYGQAGIRIGLEVTDTPRVLEKIANLIASEN 165
>gi|218887932|ref|YP_002437253.1| hypothetical protein DvMF_2848 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758886|gb|ACL09785.1| CBS domain containing membrane protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 223
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A +IL E RI PV+D + +L+G+VSD D+ A S +D +E
Sbjct: 23 ASKILKENRIRRLPVVDAEGRLIGIVSDRDI---------KEASPSKATTLD-----MHE 68
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+ LLS+ V D+MT P VR +E A ++E + LPV+D GKLVGII+
Sbjct: 69 LYYLLSEIK---VKDIMTRDPFTVRADDTVETVALNMIEKRIGGLPVIDDAGKLVGIISD 125
Query: 232 GNVVRAALQIKHATEMGAQ 250
+V + + I G Q
Sbjct: 126 SDVFKVLITITGVRHGGVQ 144
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 38/56 (67%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
++ + MT + V T++ A+++L E + RRLPVVDA+G+L+GI++ ++ A+
Sbjct: 2 LIREWMTKDVITVTPDTSMMKASKILKENRIRRLPVVDAEGRLIGIVSDRDIKEAS 57
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
++EKRI G PVIDD KLVG++SD D+ L +I+G E+++T T +
Sbjct: 102 MIEKRIGGLPVIDDAGKLVGIISDSDVFKVLITITGVRHGGVQFAFELENTPGTLKPIVD 161
Query: 175 LLSKTNGKMVGDL 187
L + N +++ L
Sbjct: 162 TLREHNARIISIL 174
>gi|392407165|ref|YP_006443773.1| contains C-terminal CBS domains [Anaerobaculum mobile DSM 13181]
gi|390620301|gb|AFM21448.1| putative transcriptional regulator, contains C-terminal CBS domains
[Anaerobaculum mobile DSM 13181]
Length = 154
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA------LDSISGSGRADNSMF 159
E F+ A+++ ++TG PVI+ +W LVG +S+ D++ L++I+ S D
Sbjct: 19 EDFIVDAVKMFYIHKVTGVPVIEGNWCLVGFISESDIIKAALPTYLETITSSAFLDK--- 75
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
+ F+++ + + V D MT + V + +L A L++ + +RLPVV
Sbjct: 76 ---EGELGLFDKIHGI----GFRKVEDFMTKEVIYVEPSASLMSVADLMIRKRIKRLPVV 128
Query: 220 DADGKLVGIITR 231
+GKL+GII R
Sbjct: 129 Q-NGKLMGIIDR 139
>gi|442611598|ref|ZP_21026304.1| putative signal transduction protein with CBS domains
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441747526|emb|CCQ12366.1| putative signal transduction protein with CBS domains
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 142
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 25/147 (17%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P T E + A+E L++ +G PVID +VG +S+ D +
Sbjct: 13 RPVTFTSEMRIEQAVEKLLQSGQSGGPVIDSARHVVGFLSEQDCIR-------------- 58
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
+++T++ NE + MV D+M AP+ V+ + ++ A + K + PV
Sbjct: 59 -KMLEATYQ--NE--------SHSMVSDVMNLAPLCVKPSDSVLQIAERMTSEKPKLYPV 107
Query: 219 VDADGKLVGIITRGNVVRAALQIKHAT 245
VD DG L+G+I+R NV+RA + H T
Sbjct: 108 VDDDGILMGVISRANVLRAIDKHLHCT 134
>gi|254381628|ref|ZP_04996992.1| CBS [Streptomyces sp. Mg1]
gi|194340537|gb|EDX21503.1| CBS [Streptomyces sp. Mg1]
Length = 214
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 23/159 (14%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
YTV D MT EA +E++ + +++ PV++ + ++VG+VS+ DL
Sbjct: 6 YTVSDVMTHT-------AVAIGREASYKEIVELMDQWKVSAVPVLEGEGRVVGVVSEADL 58
Query: 143 LALDSISGSGRADNSMFP-EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
L + R D+ P ++D SK G + +LM+ V V L
Sbjct: 59 LPKEEF----RQDDPQLPGQLDEA-----------SKAGGVLAEELMSSPAVTVHPDATL 103
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+AAR++ +RLPVV+ G L G+++R ++++ L+
Sbjct: 104 AEAARIMARKHVKRLPVVNGVGMLEGVVSRSDLLKVFLR 142
>gi|188584946|ref|YP_001916491.1| hypothetical protein Nther_0305 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179349633|gb|ACB83903.1| CBS domain containing membrane protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 147
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 87/157 (55%), Gaps = 18/157 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D M+T ++ V P +TV+EA +++ ++ I+G PVI+ LVG++++ DLL
Sbjct: 5 DIMST--DIVTVSPESTVEEA-----AKLMADREISGIPVINSQNDLVGIITEGDLLGKH 57
Query: 147 S-ISGSGRAD---NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
IS G + +F E S + F +++K ++ V DLM+ V V +E
Sbjct: 58 KRISPPGYIEFLGGIVFTE--SQDEFFEQLRKYVA----TQVKDLMSDQVVTVGPEAGIE 111
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
+ A + + +RLPVV +GKL+GI++R ++++A L
Sbjct: 112 EIATTMDQKNVKRLPVV-GEGKLLGIVSRADLLKALL 147
>gi|384105704|ref|ZP_10006619.1| hypothetical protein W59_30209 [Rhodococcus imtechensis RKJ300]
gi|383835041|gb|EID74471.1| hypothetical protein W59_30209 [Rhodococcus imtechensis RKJ300]
Length = 185
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 31/140 (22%)
Query: 111 TALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 170
TA +L E PV+DD +LVG+++ D+L RA
Sbjct: 22 TAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVL---------RA---------------- 56
Query: 171 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+T + VG++MT V L D +++LL+ R LPVVD DG++VGI++
Sbjct: 57 ------GQTCSETVGEVMTAPAVAAPMYHYLADVSQMLLQQGLRSLPVVDIDGRVVGILS 110
Query: 231 RGNVVRAALQIKHATEMGAQ 250
R +VVR L+ +GAQ
Sbjct: 111 RSDVVRLMLKPDETIAVGAQ 130
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 194 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
VVR++ ++ AA LL E + +PVVD +LVG++ G+V+RA
Sbjct: 13 VVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVLRAG 57
>gi|421591912|ref|ZP_16036684.1| hypothetical protein RCCGEPOP_22317 [Rhizobium sp. Pop5]
gi|403702494|gb|EJZ19048.1| hypothetical protein RCCGEPOP_22317 [Rhizobium sp. Pop5]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 76/128 (59%), Gaps = 8/128 (6%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V A+ I+++ ++G PV+DD ++ GLV++ DLL + + R+ + PE+ S
Sbjct: 14 VRHAVAIMLQNHVSGLPVVDDQERVCGLVTEGDLLLRREVRLAPRSARA--PELISEI-- 69
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
++++ + +NG V D+M+ +V R + + D A L + +RLP+V+ + +LVGI
Sbjct: 70 --DLERYIC-SNGWCVADVMSRDVIVARPDSEVSDIAESLQVHRIKRLPIVEEE-RLVGI 125
Query: 229 ITRGNVVR 236
++R +++R
Sbjct: 126 VSRRDILR 133
>gi|442804457|ref|YP_007372606.1| transcriptional regulator [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740307|gb|AGC67996.1| transcriptional regulator [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 213
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 19/145 (13%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
+A +P A EI+ + I PV+ D KLVG+VS+ D+ RA S +T
Sbjct: 17 DATIPDAHEIMTKNNIRRLPVVKD-GKLVGVVSNLDIT---------RATPS-----PAT 61
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
+ NE+ +L+KT + +MT P+ + LE+AA L+ + LPVVD+ GKL
Sbjct: 62 SLSINELTYILAKTK---ISKVMTKNPITISPNALLEEAAILMRDNGVSFLPVVDS-GKL 117
Query: 226 VGIITRGNVVRAALQIKHATEMGAQ 250
VGIIT ++ + +++ E G +
Sbjct: 118 VGIITESDIFDSFIELLGFREKGTR 142
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
V D MT + + + DA ++ + RRLPVV DGKLVG+++ ++ RA
Sbjct: 2 FVKDKMTTNIITISPDATIPDAHEIMTKNNIRRLPVV-KDGKLVGVVSNLDITRA 55
>gi|319778179|ref|YP_004134609.1| cbs domain containing protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317171898|gb|ADV15435.1| CBS domain containing protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 232
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 15/151 (9%)
Query: 100 PTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P +D A + A +++ +I+G PVI D LVG++S+ DLL + + G+ R
Sbjct: 10 PVVAIDPSASIADAAGLMLSSKISGLPVIRRDGALVGIISEGDLLRREEL-GTQRK---- 64
Query: 159 FPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 214
W F V + NG+ + ++MT + V +L + L+ + +
Sbjct: 65 ----RPRWLEFLVSPGRVAEEYVLANGRRIEEVMTDSVVTASPNASLAEVVELMTHHRIK 120
Query: 215 RLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
R+P+VD D K+VG+I R +++RA L ++ A+
Sbjct: 121 RVPIVDGD-KVVGMIARSDLLRALLDMQPAS 150
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+MT V + + ++ DAA L+L +K LPV+ DG LVGII+ G+++R
Sbjct: 6 IMTTPVVAIDPSASIADAAGLMLSSKISGLPVIRRDGALVGIISEGDLLR 55
>gi|150400679|ref|YP_001324445.1| signal transduction protein [Methanococcus aeolicus Nankai-3]
gi|150013382|gb|ABR55833.1| putative signal transduction protein with CBS domains
[Methanococcus aeolicus Nankai-3]
Length = 155
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 78/147 (53%), Gaps = 12/147 (8%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
KP + + A+E+ I+G PVI+DD VG+VS+ D++ +++ N +
Sbjct: 11 KPILLNENDNISDAIELFKTHNISGAPVINDDNYFVGVVSEEDIIK--TLTTHNEDINIL 68
Query: 159 FPE--------VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 210
P + +T K E +K + V ++M + + T + +A++++++
Sbjct: 69 LPSPFDLLELPLKTTLK-LEEYRKDIENAMKTKVKEIMVKDVITITPDTTINEASKIMVK 127
Query: 211 TKYRRLPVVDADGKLVGIITRGNVVRA 237
K +RLP+V+ +G+LVGI+TR +++ A
Sbjct: 128 NKVKRLPIVE-NGELVGIVTRHDILEA 153
>gi|78044420|ref|YP_359009.1| CBS/GGDEF domain-containing protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996535|gb|ABB15434.1| CBS/GGDEF domain protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 271
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 34/125 (27%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A E++ +RI G PV++++ KL+G+++ DL+ +PE
Sbjct: 25 AKELMRSQRIGGLPVVENE-KLIGIITSKDLI--------------FYPE---------- 59
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
++V D MT PVV+ E L DA + +LE RLPV+D G L GIITR
Sbjct: 60 ---------NRLVIDAMTEEPVVIEEKAYLFDAYQKMLENNIERLPVIDESGALTGIITR 110
Query: 232 GNVVR 236
+ R
Sbjct: 111 KVIER 115
>gi|418017201|ref|ZP_12656760.1| acetoin utilization protein acuB [Streptococcus salivarius M18]
gi|345527894|gb|EGX31202.1| acetoin utilization protein acuB [Streptococcus salivarius M18]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGLV++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTV-----AAAADIMRDKGLRRLPVIEHD-KLVGLVTEGTM-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S +T + E+ LL+KT VGD+M + V + +LEDA
Sbjct: 53 -------AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
++L+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 98 IYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
>gi|403253702|ref|ZP_10920003.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga sp. EMP]
gi|402811236|gb|EJX25724.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga sp. EMP]
Length = 321
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 29/122 (23%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
EI+ KRI+G PV+DD ++VG+VS D++ ++ GS D
Sbjct: 40 EIMRIKRISGVPVVDDKKRVVGIVSLEDIIK--ALEGSYIKDR----------------- 80
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
V MT V ++ET L+DA + + Y R PVVD +GKLVGI+T+ +
Sbjct: 81 ----------VEKRMTKNVVCLKETDTLQDAVKTFEKYGYGRFPVVDDEGKLVGIVTKHD 130
Query: 234 VV 235
++
Sbjct: 131 II 132
>gi|325959812|ref|YP_004291278.1| major facilitator superfamily protein [Methanobacterium sp. AL-21]
gi|325331244|gb|ADZ10306.1| major facilitator superfamily MFS_1 [Methanobacterium sp. AL-21]
Length = 559
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 28/173 (16%)
Query: 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLV 137
P V DFM + L VK +T+ E L++ + RI G PV+D L+G+V
Sbjct: 402 PEKRTLIVKDFMVS--NLISVKLDSTILEL-----LKLFTKYRIGGAPVLDSQKNLIGMV 454
Query: 138 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV--------QKLLSKTNGKMVGDLMT 189
SD D++ + P+ S EV Q +L++ V D+M
Sbjct: 455 SDGDII------------RYLAPKEGSVHDFIYEVLVEDEENEQDVLNERINATVEDVME 502
Query: 190 PAPVV-VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
+ V+E E A R+L +++LPV+D++ K++GII+RG++ ++I
Sbjct: 503 KKQIYTVKEEDTFERAIRILSHHHFKKLPVLDSNNKVIGIISRGDIDNNLMKI 555
>gi|113953851|ref|YP_730930.1| CBS domain-containing protein [Synechococcus sp. CC9311]
gi|113881202|gb|ABI46160.1| CBS domain protein [Synechococcus sp. CC9311]
Length = 156
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 10/140 (7%)
Query: 102 TTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG----RADNS 157
T E + A+ +L + I+G PV+D L+G +++ DL+ +S +G D+
Sbjct: 17 TVTPETALKDAVSLLSDHHISGLPVVDKSGLLIGELTEQDLMVRESGVDAGPYVMLLDSV 76
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
++ + W +V ++L G VGDLM E+ L AA LL E +RL
Sbjct: 77 IYLKNPLNWD--KQVHQVL----GTTVGDLMGRDLHSCLESLPLPKAASLLHERSTQRLI 130
Query: 218 VVDADGKLVGIITRGNVVRA 237
VVD D VG++TRG++VRA
Sbjct: 131 VVDDDKHPVGVLTRGDIVRA 150
>gi|22537717|ref|NP_688568.1| AcuB family protein [Streptococcus agalactiae 2603V/R]
gi|76786880|ref|YP_330197.1| hypothetical protein SAK_1593 [Streptococcus agalactiae A909]
gi|76799160|ref|ZP_00781343.1| AcuB family protein [Streptococcus agalactiae 18RS21]
gi|406709961|ref|YP_006764687.1| AcuB family protein [Streptococcus agalactiae GD201008-001]
gi|424048975|ref|ZP_17786526.1| hypothetical protein WY5_02765 [Streptococcus agalactiae ZQ0910]
gi|22534606|gb|AAN00441.1|AE014263_20 AcuB family protein [Streptococcus agalactiae 2603V/R]
gi|76561937|gb|ABA44521.1| CBS domain protein [Streptococcus agalactiae A909]
gi|76585490|gb|EAO62065.1| AcuB family protein [Streptococcus agalactiae 18RS21]
gi|389649597|gb|EIM71074.1| hypothetical protein WY5_02765 [Streptococcus agalactiae ZQ0910]
gi|406650846|gb|AFS46247.1| AcuB family protein [Streptococcus agalactiae GD201008-001]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 26/157 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K L V P TTV EA ++L E + PV+++D +LVGLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEA-----ADLLREHHLRRLPVVEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S +T + E+ LL+KT + D+M V V + +LEDA
Sbjct: 50 ----GTMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
L++ K LPVVD +G+L GI+T +V +A L+I
Sbjct: 98 IYLMMSRKIGVLPVVD-NGQLYGIVTDRDVFKAFLEI 133
>gi|268679127|ref|YP_003303558.1| inosine-5'-monophosphate dehydrogenase [Sulfurospirillum deleyianum
DSM 6946]
gi|268617158|gb|ACZ11523.1| inosine-5'-monophosphate dehydrogenase [Sulfurospirillum deleyianum
DSM 6946]
Length = 482
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 33/135 (24%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
++ P + A + AL I+ E RI+G PV+DD L+G++++ DL R +N
Sbjct: 93 IIDPVSIKAHATLRDALAIMSEYRISGVPVVDDSNTLIGILTNRDL----------RFEN 142
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRR 215
D T K V +LMT P++ V++ T L+DA + K +
Sbjct: 143 ------DYT----------------KNVEELMTKMPLITVKKGTTLDDAEAIFRTNKVEK 180
Query: 216 LPVVDADGKLVGIIT 230
LPVVD D KL G+IT
Sbjct: 181 LPVVDEDNKLSGLIT 195
>gi|383764645|ref|YP_005443627.1| hypothetical protein CLDAP_36900 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384913|dbj|BAM01730.1| hypothetical protein CLDAP_36900 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 209
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 17/137 (12%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
AL+++ +++ PV+D K+VG+VS+ DLL + S+ S W E
Sbjct: 17 ALKLMRDRKFRRLPVVDATGKIVGIVSERDLL-----HAAPSPATSL-----SVW----E 62
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
V LL K V D+MT V + + +EDAA L++ K LPVVD G +VG+IT
Sbjct: 63 VNYLLWKLK---VSDIMTRNVVTINQNMPIEDAASLMVTRKIGGLPVVDDGGAIVGVITE 119
Query: 232 GNVVRAALQIKHATEMG 248
++ +A +++ E G
Sbjct: 120 TDIFKAFVEMLGGGEHG 136
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 188 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
MT V + T ++A +L+ + K+RRLPVVDA GK+VGI++ +++ AA
Sbjct: 1 MTSPAVTISPDTPFQEALKLMRDRKFRRLPVVDATGKIVGIVSERDLLHAA 51
>gi|326801032|ref|YP_004318851.1| inosine-5'-monophosphate dehydrogenase [Sphingobacterium sp. 21]
gi|326551796|gb|ADZ80181.1| inosine-5'-monophosphate dehydrogenase [Sphingobacterium sp. 21]
Length = 491
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 43/166 (25%)
Query: 77 APSSGVYTVGDFMTTKEELHVVK------------PTTTVDEAFVPTALEILVEKRITGF 124
A + G+ + MT + + H V+ P T + A V A I+ + +I G
Sbjct: 66 AQAGGIGILHKNMTKEAQAHEVRKVKRSESGMIQDPVTLNEAALVKDAFTIMKDNKIGGI 125
Query: 125 PVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 184
PV+D + KLVG+V++ DL R M + +L++K N
Sbjct: 126 PVVDGEKKLVGIVTNRDL----------RFQKDM----------ERPISELMTKDN---- 161
Query: 185 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+ AP+ TNL A +L K +LPVVD +GKLVG+IT
Sbjct: 162 ---LVVAPI----GTNLVKAEEILQNYKIEKLPVVDGEGKLVGLIT 200
>gi|395645474|ref|ZP_10433334.1| CBS domain containing membrane protein [Methanofollis liminatans
DSM 4140]
gi|395442214|gb|EJG06971.1| CBS domain containing membrane protein [Methanofollis liminatans
DSM 4140]
Length = 283
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%)
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
+ LL K+ V LM+P PVVV T L DAA +++ YRRLPVVD +G LVG+++
Sbjct: 50 KDLLRKSEETQVALLMSPKPVVVTPDTPLSDAAAVMVRHNYRRLPVVDDNGSLVGLLSVA 109
Query: 233 NVVRAALQIKHATEM 247
+++ A Q++ E+
Sbjct: 110 DLIAAIAQLRIKDEI 124
>gi|386844881|ref|YP_006249939.1| hypothetical protein SHJG_8802 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374105182|gb|AEY94066.1| hypothetical protein SHJG_8802 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451798171|gb|AGF68220.1| hypothetical protein SHJGH_8558 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 215
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 15/130 (11%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
+E + E +++ PV++ D +++G+VS+ DLL +++ DS F +
Sbjct: 29 VERMEEWKVSALPVLEGDGRVIGVVSEADLLPKEALR-------------DSNPDRFTPM 75
Query: 173 QKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+ L L K +LM+ V V L +AAR++ + +RLPVV+A+G L G+++
Sbjct: 76 RHLTDLDKAGAMSAEELMSTPAVTVHGDATLAEAARIMALRQVKRLPVVNAEGVLEGVVS 135
Query: 231 RGNVVRAALQ 240
RG++++ L+
Sbjct: 136 RGDLLKVFLR 145
>gi|405983346|ref|ZP_11041652.1| hypothetical protein HMPREF9451_00742 [Slackia piriformis YIT
12062]
gi|404388952|gb|EJZ84033.1| hypothetical protein HMPREF9451_00742 [Slackia piriformis YIT
12062]
Length = 165
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV--- 172
L+++ ++ PV+DDD +VG +SD D++ + + S+F T +++
Sbjct: 30 LIDRGVSSLPVVDDDNHVVGFISDGDIMR----AIAEHKTRSIFSGGAPTMLYYDDETIE 85
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
QK+LS + V +L T + V E ++ A L + K+++LPV+D G+LVG+I R
Sbjct: 86 QKVLS-LRERNVMELATRKVLCVTENQSVGRVADTLAKKKFKKLPVIDEHGRLVGVIRRS 144
Query: 233 NVVRAALQI 241
+++R A ++
Sbjct: 145 SIMRYAFEL 153
>gi|320527726|ref|ZP_08028896.1| CBS domain pair protein [Solobacterium moorei F0204]
gi|320131891|gb|EFW24451.1| CBS domain pair protein [Solobacterium moorei F0204]
Length = 225
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 21/138 (15%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P T + + ALEI+ + PV+D + KL+GL+++ ++ SG S+
Sbjct: 10 NPITITADTPLSKALEIMGKNHFHRLPVVDANHKLIGLITEG---LVNDASGKNATSLSI 66
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGK--MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
+ E+ LLS+T K M+ D+ T +P+V LE+AA+++LE L
Sbjct: 67 Y-----------ELNYLLSRTQAKDIMIRDVHTISPMVF-----LEEAAQVMLENAVNVL 110
Query: 217 PVVDADGKLVGIITRGNV 234
PVVD + +VGIIT ++
Sbjct: 111 PVVDEENHVVGIITEKDI 128
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
V D MT P+ + T L A ++ + + RLPVVDA+ KL+G+IT G
Sbjct: 3 VKDHMTANPITITADTPLSKALEIMGKNHFHRLPVVDANHKLIGLITEG 51
>gi|149369518|ref|ZP_01889370.1| CBS domain protein, putative [unidentified eubacterium SCB49]
gi|149356945|gb|EDM45500.1| CBS domain protein, putative [unidentified eubacterium SCB49]
Length = 154
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 31/161 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+M+ L P +V E + +L++K+I+G PV++D +L+G++S+ D
Sbjct: 23 VSDYMS--RNLTTFSPDQSVMEV-----MSVLIKKKISGGPVVNDKNELLGIISEGD--C 73
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ IS S R N +V V D M A + N+ DA
Sbjct: 74 MKEISNS-RYHNHPIQDVK--------------------VQDHMVTAVETLDGNMNVFDA 112
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
A L ++ RR P+++ +GKLVGII++ +V++AA+ +K T
Sbjct: 113 ADKFLSSRRRRFPILE-NGKLVGIISQKDVLKAAIAMKGQT 152
>gi|212225036|ref|YP_002308272.1| inosine 5'-monophosphate dehydrogenase [Thermococcus onnurineus
NA1]
gi|212009993|gb|ACJ17375.1| inosine-5'-monophosphate dehydrogenase [Thermococcus onnurineus
NA1]
Length = 486
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 41/139 (29%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKR-ITGFPVIDDDWKLVGLVSDYDLLALDSISGS 151
E++ ++P T+D A L+EK I G PV+ +D +++G+++ D+ A
Sbjct: 101 EDVITIEPDETLDYAL------FLMEKNDIDGLPVVGEDGRIIGIITKKDIAA------- 147
Query: 152 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
G++V ++MT + V E +EDA L++E
Sbjct: 148 ---------------------------KEGRLVREVMTRDVITVPEDIAVEDALTLMVEN 180
Query: 212 KYRRLPVVDADGKLVGIIT 230
+ RLPVVD DGKLVGIIT
Sbjct: 181 RIARLPVVDGDGKLVGIIT 199
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V AL ++VE RI PV+D D KLVG+++ DL+ + R +N
Sbjct: 170 VEDALTLMVENRIARLPVVDGDGKLVGIITVSDLMMRKKYRNAVRDENG 218
>gi|345021259|ref|ZP_08784872.1| CBS domain containing membrane protein [Ornithinibacillus
scapharcae TW25]
Length = 157
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 14/154 (9%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V +FM T ++ +K T++ E LEILV RI G PV+D + KLVG+VSD D++
Sbjct: 3 VKEFMIT--DVISIKENTSIKEL-----LEILVSYRIGGVPVVDSNNKLVGVVSDGDVIR 55
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV--GDLMTPAPVVVRETTNLE 202
+ D V K +++Q L K M+ D+ T + L+
Sbjct: 56 YLKPNSQTVFDMFSIVMVSEPEKLTDKLQYALEKPVSIMMKRKDIKT-----IDAECELD 110
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
DA RL + ++++PV+D ++G+I+RG+++R
Sbjct: 111 DALRLFSKYHFKKIPVLDNTETVIGVISRGDLLR 144
>gi|423343079|ref|ZP_17320793.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides johnsonii
CL02T12C29]
gi|409216755|gb|EKN09738.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides johnsonii
CL02T12C29]
Length = 491
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T V AL ++ E +I G PV+D+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTITRGKTVGDALGMMKEYKIGGIPVVDESDHLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + M VD ++++K N +V ++T+LE AA +L + K
Sbjct: 144 RFERDMNRSVD----------EVMTKEN-----------LIVADQSTDLEAAASILQQHK 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD+ +LVG+IT ++ RA
Sbjct: 183 IEKLPVVDSQNRLVGLITYKDITRA 207
>gi|77411390|ref|ZP_00787737.1| AcuB family protein [Streptococcus agalactiae CJB111]
gi|410594961|ref|YP_006951688.1| Acetoin utilization protein AcuB [Streptococcus agalactiae SA20-06]
gi|421532751|ref|ZP_15979100.1| hypothetical protein M3M_07249 [Streptococcus agalactiae
STIR-CD-17]
gi|77162563|gb|EAO73527.1| AcuB family protein [Streptococcus agalactiae CJB111]
gi|403641979|gb|EJZ02880.1| hypothetical protein M3M_07249 [Streptococcus agalactiae
STIR-CD-17]
gi|410518600|gb|AFV72744.1| Acetoin utilization protein AcuB [Streptococcus agalactiae SA20-06]
Length = 219
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 26/157 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K L V P TTV EA ++L E + PV+++D +LVGLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEA-----ADLLREHHLRRLPVVEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S +T + E+ LL+KT + D+M V V + +LEDA
Sbjct: 50 ----GTMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
L++ K LPVVD +G+L GI+T +V +A L+I
Sbjct: 98 IYLMMSRKIGVLPVVD-NGQLYGIVTDRDVFKAFLEI 133
>gi|387783442|ref|YP_006069525.1| putative CBS domain-containing protein [Streptococcus salivarius
JIM8777]
gi|338744324|emb|CCB94690.1| putative CBS domain protein [Streptococcus salivarius JIM8777]
Length = 219
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 84/164 (51%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGL+++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTV-----AAAADIMRDKGLRRLPVIEHD-KLVGLITEGTM-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S +T + E+ LL+KT VGD+M + V + +LEDA
Sbjct: 53 -------AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
++L+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 98 IYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDE-AFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
VGD M +K TV + A + A+ I+++ ++ PV+D+D ++ G+++D D+
Sbjct: 77 VGDIM--------IKNVLTVSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVF 127
Query: 144 -ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
A ISG G+A + EV T + ++ L++ N
Sbjct: 128 RAFLEISGYGQAGIRIGLEVPDTPRVLEKIANLIASEN 165
>gi|77408331|ref|ZP_00785073.1| AcuB family protein [Streptococcus agalactiae COH1]
gi|421148102|ref|ZP_15607774.1| hypothetical protein GB112_09575 [Streptococcus agalactiae GB00112]
gi|77173094|gb|EAO76221.1| AcuB family protein [Streptococcus agalactiae COH1]
gi|401685440|gb|EJS81448.1| hypothetical protein GB112_09575 [Streptococcus agalactiae GB00112]
Length = 219
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 26/157 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K L V P TTV EA ++L E + PV+++D +LVGLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEA-----ADLLREHHLRRLPVVEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S +T + E+ LL+KT + D+M V V + +LEDA
Sbjct: 50 ----GTMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
L++ K LPVVD +G+L GI+T +V +A L+I
Sbjct: 98 IYLMMSRKIGVLPVVD-NGQLYGIVTDRDVFKAFLEI 133
>gi|116750087|ref|YP_846774.1| hypothetical protein Sfum_2661 [Syntrophobacter fumaroxidans MPOB]
gi|116699151|gb|ABK18339.1| CBS domain containing membrane protein [Syntrophobacter
fumaroxidans MPOB]
Length = 156
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 24/144 (16%)
Query: 100 PTTTVDEAFVPTALEI---LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
PT TV EA + A E + +R+ G VID+D +LVG++S YD+L L
Sbjct: 18 PTMTVAEAVL--AFENASRTLGRRVFGMMVIDEDGELVGMISMYDILVL----------- 64
Query: 157 SMFPEVDSTWKTFNE------VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 210
M P+ W + +++ L + VGDLM+ + + T+L ++L
Sbjct: 65 -MRPKHIHIWGEMKDIDVTGFIRQNLQRAKQIQVGDLMSTDIITITPETHLLSIVDIMLR 123
Query: 211 TKYRRLPVVDADGKLVGIITRGNV 234
RRLPV+D GK+VGI+ NV
Sbjct: 124 KHVRRLPVLDR-GKVVGIVHISNV 146
>gi|385675865|ref|ZP_10049793.1| hypothetical protein AATC3_08107 [Amycolatopsis sp. ATCC 39116]
Length = 195
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 24/139 (17%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P T+ EA IL + T PV+DDD +LVG+V++ DL+A
Sbjct: 8 VTPGTSAKEA-----ARILSSRGFTALPVVDDDERLVGIVTEADLVA------------- 49
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
D + + + G V ++MT + T+L +R LL+ + R +P
Sbjct: 50 -----DRLPRDPRTHEDRTDRAPGATVAEVMTSPATAMSPGTDLATLSRALLDARIRAMP 104
Query: 218 VVDADGKLVGIITRGNVVR 236
+ + G++VGI+TRG++VR
Sbjct: 105 IAEG-GQVVGIVTRGDIVR 122
>gi|85716127|ref|ZP_01047103.1| hypothetical protein NB311A_11125 [Nitrobacter sp. Nb-311A]
gi|85697126|gb|EAQ35008.1| hypothetical protein NB311A_11125 [Nitrobacter sp. Nb-311A]
Length = 147
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 19/117 (16%)
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
+PV+DD VGLV+ +D L +++ S SM P D K
Sbjct: 38 FNAYPVVDDQGDAVGLVTKFDFLKCFALTLS-----SMVPRYDELMK------------- 79
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ V D M + V TT L +L++E + R +PV+D + LVGII+R +V+RA
Sbjct: 80 -RTVSDTMVHEFIYVSATTKLVRVLQLMVEHRLRSVPVMDTEQHLVGIISREDVMRA 135
>gi|440712734|ref|ZP_20893348.1| protein containing Cystathionine beta-synthase, core domain protein
[Rhodopirellula baltica SWK14]
gi|436442573|gb|ELP35695.1| protein containing Cystathionine beta-synthase, core domain protein
[Rhodopirellula baltica SWK14]
Length = 193
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 25/126 (19%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
AL++L+ +RI+G PV+D D VG+ S+ + + G + P
Sbjct: 63 ALDVLLRQRISGAPVVDGDGHFVGVFSEKSCMKF--VVGMAYENLPSIP----------- 109
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
VGDL P + E T+L A+ L+ RRLPV+D++G+L G I+R
Sbjct: 110 ------------VGDLTDKNPPTISEETDLLTIAQTFLDAACRRLPVLDSEGRLRGQISR 157
Query: 232 GNVVRA 237
+V+RA
Sbjct: 158 RDVMRA 163
>gi|228476578|ref|ZP_04061260.1| AcuB family protein [Streptococcus salivarius SK126]
gi|228251773|gb|EEK10838.1| AcuB family protein [Streptococcus salivarius SK126]
Length = 219
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 84/164 (51%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGL+++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTV-----AAAADIMRDKGLRRLPVIEHD-KLVGLITEGTM-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S +T + E+ LL+KT VGD+M + V + +LEDA
Sbjct: 53 -------AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
++L+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 98 IYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
>gi|154249344|ref|YP_001410169.1| signal transduction protein [Fervidobacterium nodosum Rt17-B1]
gi|154153280|gb|ABS60512.1| putative signal transduction protein with CBS domains
[Fervidobacterium nodosum Rt17-B1]
Length = 309
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 39/151 (25%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
VKP TV EIL KRI+G PV+DDD +VG++S D++ + +
Sbjct: 28 VKPDRTV-----AQVKEILRLKRISGVPVVDDDGNVVGIISIEDII-------KSLENGT 75
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ +VD MT + + + L++ + KY R P
Sbjct: 76 LHEKVDKH----------------------MTARVICLHKDMTLQEVIKQFERYKYGRFP 113
Query: 218 VVDADGKLVGIITRGNVVRAALQIKHATEMG 248
VVD DGKLVGI+T+ +++ A AT +G
Sbjct: 114 VVDDDGKLVGIVTKNDILAAV-----ATRLG 139
>gi|365893444|ref|ZP_09431621.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365425843|emb|CCE04163.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 242
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 99 KPTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
+P TV E + A I++ + ++G PV+D KLVG+VS+ D + I G+ R
Sbjct: 9 RPVITVTPETPIVEAANIMLTRHVSGLPVVDSAGKLVGVVSEGDFIRRSEI-GTERKRGR 67
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ K+ + + +G+ V ++MT AP+ + E T L + ++ +RLP
Sbjct: 68 WLRFILGPGKSAAD----FVQEHGRKVSEVMTKAPLTITEDTALAEIVDIMERNHVKRLP 123
Query: 218 VVDADGKLVGIITRGNVVRA 237
V D ++VGI++R N+++A
Sbjct: 124 VTRGD-QVVGIVSRANLLQA 142
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+MT + V T + +AA ++L LPVVD+ GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVTPETPIVEAANIMLTRHVSGLPVVDSAGKLVGVVSEGDFIR 55
>gi|322517389|ref|ZP_08070263.1| CBS domain protein [Streptococcus vestibularis ATCC 49124]
gi|322123987|gb|EFX95543.1| CBS domain protein [Streptococcus vestibularis ATCC 49124]
Length = 219
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 84/164 (51%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGL+++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTV-----AAATDIMRDKGLRRLPVIEHD-KLVGLITEGTM-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S +T + E+ LL+KT VGD+M + V + +LEDA
Sbjct: 53 -------AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
++L+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 98 IYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
>gi|77406654|ref|ZP_00783697.1| AcuB family protein [Streptococcus agalactiae H36B]
gi|77174726|gb|EAO77552.1| AcuB family protein [Streptococcus agalactiae H36B]
Length = 219
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 26/157 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K L V P TTV EA ++L E + PV+++D +LVGLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEA-----ADLLREHHLRRLPVVEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S +T + E+ LL+KT + D+M V V + +LEDA
Sbjct: 50 ----GTMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
L++ K LPVVD +G+L GI+T +V +A L+I
Sbjct: 98 IYLMMSRKIGVLPVVD-NGQLYGIVTDRDVFKAFLEI 133
>gi|312862989|ref|ZP_07723228.1| CBS domain protein [Streptococcus vestibularis F0396]
gi|311101484|gb|EFQ59688.1| CBS domain protein [Streptococcus vestibularis F0396]
Length = 219
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGL+++
Sbjct: 3 VKDFMTKR--VVYVSPETTV-----AAATDIMRDKGLRRLPVIEHD-KLVGLITE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+I+ + + +T + E+ LL+KT VGD+M + V + +LEDA
Sbjct: 50 -GTIAEASPSK--------ATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
++L+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 98 IYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
>gi|167043446|gb|ABZ08148.1| putative CBS domain protein [uncultured marine microorganism
HF4000_APKG1C9]
Length = 147
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 27/151 (17%)
Query: 94 ELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 153
E+ P + + A ++++ PV+DD+ LVG+++D D+ G
Sbjct: 5 EIMTSDPACCKENQSLQDAARLMIDNDCGQIPVVDDEGGLVGVITDRDVCCRAVAEG--- 61
Query: 154 ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 213
M E VGD+MT + V V T+LED + + +
Sbjct: 62 ----MSAET--------------------RVGDVMTRSVVSVTPDTSLEDCLASMEKNQV 97
Query: 214 RRLPVVDADGKLVGIITRGNVVRAALQIKHA 244
RR+PV+D DGK G++++ +V R K A
Sbjct: 98 RRVPVIDDDGKCCGMVSQADVARTGNDAKTA 128
>gi|407474893|ref|YP_006789293.1| hypothetical protein Curi_c24510 [Clostridium acidurici 9a]
gi|407051401|gb|AFS79446.1| CBS domain-containing protein [Clostridium acidurici 9a]
Length = 146
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 21/145 (14%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P TT++E ++L E I+G PV++++ K++G+V++ DLL + N
Sbjct: 14 VDPDTTIEELA-----KVLTENNISGVPVVENE-KIIGIVTEGDLLH--------KEVNP 59
Query: 158 MFPEVDSTW------KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
P V S K F + + L K + ++MT +V E T +++ A +++
Sbjct: 60 KTPGVYSVMGGFAYLKEFEKYKLELQKLSAHKASEIMTTKLELVTEDTEIKEIASIMINK 119
Query: 212 KYRRLPVVDADGKLVGIITRGNVVR 236
R+PVV DGKLVGI++R +V++
Sbjct: 120 NINRVPVV-RDGKLVGIVSRADVLK 143
>gi|340398179|ref|YP_004727204.1| acetoin utilization protein acuB [Streptococcus salivarius CCHSS3]
gi|387761955|ref|YP_006068932.1| AcuB family protein [Streptococcus salivarius 57.I]
gi|338742172|emb|CCB92677.1| acetoin utilization protein acuB [Streptococcus salivarius CCHSS3]
gi|339292722|gb|AEJ54069.1| AcuB family protein [Streptococcus salivarius 57.I]
Length = 219
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 84/164 (51%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGL+++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTV-----AAAADIMRDKGLRRLPVIEHD-KLVGLITEGTM-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S +T + E+ LL+KT VGD+M + V + +LEDA
Sbjct: 53 -------AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
++L+ K LPVVD D ++ GIIT +V RA L+I + G
Sbjct: 98 IYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEISGYGQAG 140
>gi|384246764|gb|EIE20253.1| CBS-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 212
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 49/174 (28%)
Query: 66 FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFP 125
F +L +SA+P + ++ D M+T +L V P T +++ + ++TG P
Sbjct: 76 FFQNSLFKDSASPGN---SLKDIMST--DLTYVYPETKIEDLG-------QIFSKVTGVP 123
Query: 126 VI--DDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 183
V+ + D LVG++S DL SKT GK+
Sbjct: 124 VVKSESDLTLVGVLSKKDL----------------------------------SKT-GKV 148
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
V D+ + PV R + DAA L+L+ K R+P+VD KL+GI+TR ++ A
Sbjct: 149 VSDIWSSPPVAARGENKVADAACLMLKHKVHRIPIVDTQAKLIGIVTRTDIFTA 202
>gi|313676663|ref|YP_004054659.1| cbs domain containing protein [Marivirga tractuosa DSM 4126]
gi|312943361|gb|ADR22551.1| CBS domain containing protein [Marivirga tractuosa DSM 4126]
Length = 156
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 31/154 (20%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
+V D+M T L T+ EA ++IL++K+I+G PV+D++ L+G++S+ D L
Sbjct: 23 SVKDYMATN--LITFNEHQTIYEA-----MDILMKKKISGGPVVDENNNLIGVISEGDCL 75
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ + G +N KL +V D M + + TN+ +
Sbjct: 76 K-EIVKGK-----------------YNNSPKLPG-----LVKDYMATNVIHIDPETNIFE 112
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
AA + L ++RR PV+ +GKL+G I++ +++RA
Sbjct: 113 AANMFLRMRFRRFPVL-KEGKLIGQISQRDIMRA 145
>gi|260771538|ref|ZP_05880462.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
gi|260613503|gb|EEX38698.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
Length = 357
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 25/147 (17%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
+KP T+ +A LE+L + + T PV+DD+ +LVG+ S D L +N
Sbjct: 233 LKPNDTIHKA-----LELLQQNQFTALPVVDDEHELVGIFSLVDFL--------RSVENR 279
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL--LLETKYRR 215
F +F + K K V M APV +R T++ AR+ LL + Y
Sbjct: 280 KF-------DSFIALYLHAKKKAKKEVSQFMNAAPVFMRTDTHI---ARMIPLLTSGYHH 329
Query: 216 LPVVDADGKLVGIITRGNVVRAALQIK 242
+P+VD +L G++T+ +++ IK
Sbjct: 330 IPIVDNRNRLKGMVTQSDLIEFLYNIK 356
>gi|260584956|ref|ZP_05852700.1| acetoin utilization protein AcuB [Granulicatella elegans ATCC
700633]
gi|260157386|gb|EEW92458.1| acetoin utilization protein AcuB [Granulicatella elegans ATCC
700633]
Length = 213
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 25/157 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+M+T L V+PTTTV +A L+++ E + PV++ D KLVGL++ +L+A
Sbjct: 3 VKDYMSTN--LITVEPTTTVMKA-----LDLMKEHDVHRLPVVEGD-KLVGLLT-AELVA 53
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+S S + T + +E+ LL+KT K D+M + V+ T LE+A
Sbjct: 54 QNSPSMA-------------TSLSVHELNYLLNKTTAK---DIMLKQVITVKPTAVLEEA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
A ++ + LPV+++ G LVGIIT +++ A + I
Sbjct: 98 ASIMRQQGIGVLPVLESRGNLVGIITDKDIMDAFIDI 134
>gi|393757933|ref|ZP_10346757.1| signal transduction protein [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|393165625|gb|EJC65674.1| signal transduction protein [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
Length = 161
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MT P E V IL+E RI G PV D + +L+G+V++ DL+
Sbjct: 3 VRDLMTPN-------PIQIAPETAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLV- 54
Query: 145 LDSISGSGRADNSMFPEVDSTWK------TFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 198
RA + +S WK F KT G+ +MT + V
Sbjct: 55 -------HRAADERLEPRESVWKENFYRSVFRRRTPETDKTEGRTAAQVMTREVLTVAPE 107
Query: 199 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
++ AARLL + + LPV++ + +L+GII+R ++++
Sbjct: 108 DHVTVAARLLADHNIKSLPVIENE-RLIGIISRFDLIK 144
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
V DLMTP P+ + T + + AR+L+E + +PV D +G+L+GI+T G++V A
Sbjct: 3 VRDLMTPNPIQIAPETAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLVHRA 57
>gi|406662595|ref|ZP_11070687.1| putative manganese-dependent inorganic pyrophosphatase [Cecembia
lonarensis LW9]
gi|405553460|gb|EKB48685.1| putative manganese-dependent inorganic pyrophosphatase [Cecembia
lonarensis LW9]
Length = 152
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 24/140 (17%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
E + LE+L +++I+G PV+D + +L+G++S+ D L I ++ FP
Sbjct: 36 EDSIDHVLEVLTKRKISGAPVVDKEGRLIGIISEVD--CLKEIIKGKYSNTPKFPGT--- 90
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
V D MT + + +L DAA+ L+ K RR PV+ DGKL
Sbjct: 91 ------------------VADHMTEDVITLSPDLSLFDAAQKFLDLKIRRFPVL-KDGKL 131
Query: 226 VGIITRGNVVRAALQIKHAT 245
+G I+ +V+RA +++ T
Sbjct: 132 IGQISLSDVIRAFPKLRSTT 151
>gi|118602320|ref|YP_903535.1| signal-transduction protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567259|gb|ABL02064.1| putative signal-transduction protein with CBS domains [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
Length = 146
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 17/130 (13%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS----TWKTFN 170
I+V I+G PV+DDD LVG++S+ D+L MFP++D T+ F
Sbjct: 26 IMVMDHISGAPVVDDDNNLVGIISEKDILQ------------HMFPKLDEVMSDTYFDFE 73
Query: 171 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
++ T VG+LMT + + AA + RR+PV + KLVGI++
Sbjct: 74 NMEHNYKNTMNVKVGELMTKDVASIDLSMPCLKAASTMWLRNIRRIPVT-HNNKLVGIVS 132
Query: 231 RGNVVRAALQ 240
G+V RA +
Sbjct: 133 IGDVHRAIFK 142
>gi|432334464|ref|ZP_19586142.1| hypothetical protein Rwratislav_06860, partial [Rhodococcus
wratislaviensis IFP 2016]
gi|430778613|gb|ELB93858.1| hypothetical protein Rwratislav_06860, partial [Rhodococcus
wratislaviensis IFP 2016]
Length = 172
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 33/164 (20%)
Query: 89 MTTKEELHVV-KPTTTVDEA-FVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
M T L+V+ +P V ++ + TA +L E PV+DD +LVG+++ D+L
Sbjct: 1 MVTMRVLNVMQRPVRVVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVL--- 57
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
RA ++ + + VG++MT V L D ++
Sbjct: 58 ------RAGHA----------------------SSETVGEVMTAPAVAAPMYQYLADVSQ 89
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+LL+ R LPVVD DG++VGI++R +VVR L+ +GAQ
Sbjct: 90 MLLQHGLRSLPVVDIDGRVVGILSRSDVVRLMLKPDETIAVGAQ 133
>gi|317154893|ref|YP_004122941.1| hypothetical protein Daes_3203 [Desulfovibrio aespoeensis Aspo-2]
gi|316945144|gb|ADU64195.1| CBS domain containing protein [Desulfovibrio aespoeensis Aspo-2]
Length = 225
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 63/125 (50%), Gaps = 17/125 (13%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A +IL +K I FPV+D LVG+VSD D+ A S F D T
Sbjct: 23 AADILRQKDIRQFPVVDGQGVLVGIVSDRDIR---------DAMPSKFIPGDCTDGREGG 73
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+ L + GD+MTP P+ V T + A +L+ K LPVV+ GKLVGIIT+
Sbjct: 74 LNTLTA-------GDIMTPGPLTVAPDTAINAVAEILVRHKIGGLPVVEG-GKLVGIITQ 125
Query: 232 GNVVR 236
+V+R
Sbjct: 126 ADVMR 130
>gi|32473238|ref|NP_866232.1| inosine monophosphate dehydrogenase-like protein [Rhodopirellula
baltica SH 1]
gi|417303259|ref|ZP_12090318.1| protein containing Cystathionine beta-synthase, core domain
[Rhodopirellula baltica WH47]
gi|421613449|ref|ZP_16054530.1| protein containing Cystathionine beta-synthase, core domain protein
[Rhodopirellula baltica SH28]
gi|32397917|emb|CAD73918.1| conserved hypothetical protein-putative inosine monophosphate
dehydrogenase-related protein [Rhodopirellula baltica SH
1]
gi|327540439|gb|EGF27024.1| protein containing Cystathionine beta-synthase, core domain
[Rhodopirellula baltica WH47]
gi|408495744|gb|EKK00322.1| protein containing Cystathionine beta-synthase, core domain protein
[Rhodopirellula baltica SH28]
Length = 193
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 25/126 (19%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
AL++L+ +RI+G PV+D D VG+ S+ + + G + P
Sbjct: 63 ALDVLLRQRISGAPVVDGDGHFVGVFSEKSCMKF--VVGMAYENLPSIP----------- 109
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
VGDL P + E T+L A+ L+ RRLPV+D++G+L G I+R
Sbjct: 110 ------------VGDLTDKNPPTISEETDLLTIAQTFLDAACRRLPVLDSEGRLRGQISR 157
Query: 232 GNVVRA 237
+V+RA
Sbjct: 158 RDVMRA 163
>gi|336326365|ref|YP_004606331.1| IMP dehydrogenase [Corynebacterium resistens DSM 45100]
gi|336102347|gb|AEI10167.1| IMP dehydrogenase [Corynebacterium resistens DSM 45100]
Length = 510
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 62/135 (45%), Gaps = 33/135 (24%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
V P T E + E+ RI+G PV DD+ LVG++++ D+
Sbjct: 107 VTDPVTASPEMTIREVDELCARFRISGLPVTDDEGVLVGIITNRDM-------------- 152
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRR 215
P+ + + NEV MT AP+VV E + E A RLL E K +
Sbjct: 153 RFEPDFE---RPVNEV---------------MTKAPLVVAEEGVSTEAALRLLSENKVEK 194
Query: 216 LPVVDADGKLVGIIT 230
LP+VD GKLVG+IT
Sbjct: 195 LPIVDGAGKLVGLIT 209
>gi|269925732|ref|YP_003322355.1| hypothetical protein Tter_0615 [Thermobaculum terrenum ATCC
BAA-798]
gi|269789392|gb|ACZ41533.1| protein of unknown function DUF190 [Thermobaculum terrenum ATCC
BAA-798]
Length = 426
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 82 VYTVGDFMTTKE-------ELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLV 134
V++ G+F +E E+ P + + + A+E+L + PVID++ ++
Sbjct: 104 VHSYGEFHPGRELRNIRIKEIMTPNPISINVSSPIVDAIELLYNQVFKALPVIDNEKHVL 163
Query: 135 GLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV 194
G+++ DL+ + P +D KT + + L +K V +M+ V
Sbjct: 164 GVITSSDLVNQGILP-------FYLPLLD---KTDVDKKDLHNKAYNSSVSSVMSKPAVT 213
Query: 195 VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
+ + ++AA L+ K +RLPVVD KLVGI++R +++ AA+ K E
Sbjct: 214 INQDATAQEAANLMASKKIKRLPVVDDQDKLVGIVSRVDILAAAMHTKAREE 265
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD--NSMFPEVDSTWKTFNEVQ 173
L+E I V+D+ K+ G++ DL+ +++S RA + ++ ++ ++
Sbjct: 303 LLESPIHRLIVVDEQNKVKGIIGSSDLM--NAVSSHNRAGIMEILRAQILRDERSMEHIR 360
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
K+ ++T D+M V + ++ AA L+++ + + LPVVD GKLVG+I R
Sbjct: 361 KIRART----AEDIMNREVVCISADADISSAAELMVKQRKKILPVVDDSGKLVGVIARDE 416
Query: 234 VV 235
++
Sbjct: 417 IL 418
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 99 KPTTTVDE-AFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
KP T+++ A A ++ K+I PV+DD KLVG+VS D+LA ++ R ++
Sbjct: 209 KPAVTINQDATAQEAANLMASKKIKRLPVVDDQDKLVGIVSRVDILAA-AMHTKAREEDL 267
Query: 158 MFP-EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
P ++ S+ K V D+M V + D + LLE+ RL
Sbjct: 268 KPPSQISSSTK----------------VSDIMHTQVPTVDLGAPILDVVKGLLESPIHRL 311
Query: 217 PVVDADGKLVGIITRGNVVRA 237
VVD K+ GII +++ A
Sbjct: 312 IVVDEQNKVKGIIGSSDLMNA 332
>gi|288932598|ref|YP_003436658.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
gi|288894846|gb|ADC66383.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
Length = 278
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
+ +L K V LMTP P V T+L++ AR+LL+T +RRLPVV+ +GKLVGIIT
Sbjct: 50 KDILRKVEEDQVAFLMTPNPTTVTPDTDLKEVARILLDTHFRRLPVVE-NGKLVGIITVR 108
Query: 233 NVVRAALQIKHATEMG 248
++ I+ +EMG
Sbjct: 109 DI------IEKISEMG 118
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTV---------DEAFVPTALEILVEKRITGFPVIDDDW 131
G+ TV D + E+ + KP E + A EI+ + PV+DD+
Sbjct: 103 GIITVRDIIEKISEMGIDKPVKDFVNPNAVCVWQETPLNVAGEIMRLANVEFCPVLDDNA 162
Query: 132 KLVGLVSDYDLLA-------LDSISGSGRADNSMFPEVDSTWK---------TFNEVQKL 175
+VG++ + LL L+S S +D D W + EV L
Sbjct: 163 SIVGVIDEKILLTETLIEEFLESTQYSSSSD------FDDAWSWESIRDYSVKYFEVSVL 216
Query: 176 -LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
L K K M A V V T++ AA+ ++ +PV+DA+G++VGI+ N+
Sbjct: 217 KLPKEPAK---KFMKKA-VFVYPQTSVSKAAKEMVRNDLDFIPVIDANGRVVGILPDKNL 272
Query: 235 VRAALQ 240
+R ++
Sbjct: 273 LRVLVE 278
>gi|256811441|ref|YP_003128810.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus fervens
AG86]
gi|256794641|gb|ACV25310.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus fervens
AG86]
Length = 496
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 44/160 (27%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPT------------ALEILVEKRITGFPVIDDDWKLVGL 136
MT ++++H V+ DE V A+ I+ I+G PV+D++ KLVG+
Sbjct: 77 MTIEDQVHQVQAVKKADEIVVKDVITVSPEDTIGDAINIMENYSISGLPVVDNEEKLVGI 136
Query: 137 VSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 196
++ D+ A++ S K V D+MT V +
Sbjct: 137 ITHRDVKAIEDKS--------------------------------KKVEDVMTKDVVCAK 164
Query: 197 ETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
E E+A L+ + RLP+VD + +L+GIIT ++++
Sbjct: 165 EDIKEEEALELMYANRVERLPIVDDEKRLIGIITLRDILK 204
>gi|392410019|ref|YP_006446626.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
gi|390623155|gb|AFM24362.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
Length = 233
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 19/151 (12%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
PT V+ A + A+ + E ++ PV+ + +L+G+V+D DL RA S
Sbjct: 12 PTIDVN-ASMQDAMVCMKEHKVALLPVMQKN-QLIGVVTDRDL---------KRASAS-- 58
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
D+T +E+ LLS+ V D+M+ PV + LE+AA +LL+ + PV+
Sbjct: 59 ---DATSLDIHELIYLLSRIK---VSDIMSRKPVTLAPDLTLEEAASILLKNNFSGAPVI 112
Query: 220 DADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+ DGK++G+I+ + +A + + + G Q
Sbjct: 113 NGDGKVIGLISNHELFQALISLSGLEQRGVQ 143
>gi|328954414|ref|YP_004371748.1| signal transduction protein with CBS domains [Desulfobacca
acetoxidans DSM 11109]
gi|328454738|gb|AEB10567.1| putative signal transduction protein with CBS domains [Desulfobacca
acetoxidans DSM 11109]
Length = 426
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 11/152 (7%)
Query: 90 TTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 149
T EL ++P E + +L+ TG PV+D + VG++S DL+ +
Sbjct: 116 TQVRELMTLQPRKVNLETSLAEVTRLLLSSTFTGLPVVDAEKHPVGVISQTDLIYKAGMP 175
Query: 150 GS-GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 208
G S +VD+ +L + ++MT V + + + +A L+
Sbjct: 176 MRLGLLSESADEKVDA----------VLEALGSRQAREIMTKPAVTIGQEQRVTEAVNLM 225
Query: 209 LETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
LE K +RLPVVDA+GKLVG ++R ++ + L+
Sbjct: 226 LEKKVKRLPVVDAEGKLVGNLSRVDIFHSILR 257
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 99 KPTTTV-DEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
KP T+ E V A+ +++EK++ PV+D + KLVG +S D+ +S
Sbjct: 207 KPAVTIGQEQRVTEAVNLMLEKKVKRLPVVDAEGKLVGNLSRVDIF------------HS 254
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ E W+TF + QK+ + N + V D+M V T +E+ RL+ +R+
Sbjct: 255 ILRECPD-WQTFQK-QKI-NVENLRFVSDIMRRETTTVLPETPVEEVIRLIDCGDIQRVC 311
Query: 218 VVDADGKLVGIIT 230
VVD G +G+I+
Sbjct: 312 VVDQQGNFLGLIS 324
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 101 TTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN--SM 158
TT + E V + ++ I V+D +GL+SD DLL + G D S
Sbjct: 287 TTVLPETPVEEVIRLIDCGDIQRVCVVDQQGNFLGLISDRDLLVAFADRHPGIWDYFVSK 346
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
P + + +Q+ L K ++M + + E + +A RL+LE +RLPV
Sbjct: 347 LPFTERR-RRHKHLQRHLEV---KTASEVMNTHIITIEEDAPINEAIRLMLENCIKRLPV 402
Query: 219 VDADGKLVGIITRGNVVRAAL 239
+DA GK G+++R ++R
Sbjct: 403 LDAQGKFKGMVSREALLRTGF 423
>gi|374853646|dbj|BAL56549.1| inosine monophosphate dehydrogenase [uncultured Bacteroidetes
bacterium]
Length = 486
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 33/141 (23%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
+V P T A V A +++ + RI G P+++ D +L G++++ D+
Sbjct: 95 IVDPITLPPGAPVREAFQLMADHRIGGIPIVEKDRRLGGILTNRDI-------------- 140
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRR 215
F D T V MTPAP+VV E T L++A +L + K +
Sbjct: 141 -RFAVPDDTP-----------------VSAYMTPAPLVVAPEGTGLDEAEAILRKHKVEK 182
Query: 216 LPVVDADGKLVGIITRGNVVR 236
LP+VD G+LVG+IT +++R
Sbjct: 183 LPIVDGAGRLVGLITYKDILR 203
>gi|268324812|emb|CBH38400.1| conserved hypothetical protein containing CBS domain pair
[uncultured archaeon]
Length = 154
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLAL-DSISGSGRADNSMFPEVDSTWKTFNEVQ 173
+L E I G PV++D ++VG+VS D+L L D F +D +E++
Sbjct: 28 VLKENSIAGVPVVNDRKEVVGVVSVSDILKLLDDFHWY----TPFFSAMDILHLHSDELE 83
Query: 174 KL---LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+ + + + V D M+ P + T ++DAA+++ T + RLPV+D GKLVGI+
Sbjct: 84 NVKRDIEEVSEMKVKDAMSKNPKTIAPDTLIDDAAQIMYSTGFNRLPVLDGKGKLVGIVA 143
Query: 231 RGNVV 235
R +++
Sbjct: 144 RADII 148
>gi|156743706|ref|YP_001433835.1| hypothetical protein Rcas_3778 [Roseiflexus castenholzii DSM 13941]
gi|156235034|gb|ABU59817.1| CBS domain containing protein [Roseiflexus castenholzii DSM 13941]
Length = 225
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 28/161 (17%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+M+T V+ PTTT+ EA ++ ++RI PV+++ KL+G+++ DL A
Sbjct: 6 VADWMSTPAI--VIAPTTTLAEA-----QRLMEQRRIRRLPVVENG-KLIGIITRGDLRA 57
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
AD ++ ++ E + LL + V + MT V + + DA
Sbjct: 58 AQP------ADTTL---------SYYEWRALLDRVT---VVECMTRHVVTITPDASALDA 99
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
ARL+L K LPVVD +G+++GIIT ++ R LQI AT
Sbjct: 100 ARLMLTYKIGGLPVVDDEGRVIGIITESDLFR--LQIALAT 138
>gi|86748495|ref|YP_484991.1| hypothetical protein RPB_1370 [Rhodopseudomonas palustris HaA2]
gi|86571523|gb|ABD06080.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
HaA2]
Length = 171
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 29/155 (18%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKR-ITGFPVIDDDWKLVGLVSDYDL 142
TV D MT VKP T LE E+ +PV++ + +GLV+ YD
Sbjct: 36 TVADHMTRS-----VKPVT---REMTMRELEDQFERDDYNAYPVLEGS-RAIGLVTKYDF 86
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
L + + M P D L+++T VGD+MTP + V T L
Sbjct: 87 LNCFAFHPT-----QMLPHYDD----------LMNRT----VGDIMTPDFIYVHADTKLT 127
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+L++E + R +PV+DAD +L GII+R +V++A
Sbjct: 128 RVLQLMVEHQTRSIPVLDADRRLEGIISREDVIKA 162
>gi|374630841|ref|ZP_09703226.1| putative signal transduction protein with CBS domains
[Methanoplanus limicola DSM 2279]
gi|373908954|gb|EHQ37058.1| putative signal transduction protein with CBS domains
[Methanoplanus limicola DSM 2279]
Length = 159
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 11/146 (7%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P T + V A IL +KRI G PV++ + +L G+V++ D+L+L + +D+
Sbjct: 10 NPVTITVNSKVSEAAGILRKKRIGGLPVMNGE-RLAGIVTETDILSL--LDTGDLSDDLW 66
Query: 159 FPE----VDSTWKTF---NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
P ++ + F + +K LS V D+M+ V + + ++EDAA L+L
Sbjct: 67 LPSPLEIIEIPIREFINWEKTKKALSDIGDSPVSDIMSTEIVSIDDEADIEDAAGLMLSE 126
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRA 237
RLPV+ + +LVGIITR ++VR
Sbjct: 127 GIARLPVLKQN-RLVGIITRQDIVRG 151
>gi|374710730|ref|ZP_09715164.1| signal transduction protein with CBS and DRTGG domains
[Sporolactobacillus inulinus CASD]
Length = 437
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 153 RADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 210
+ +S FP VDS K V + ++ + + LMTP PVVV TT++ AA ++
Sbjct: 219 KTSHSRFPVVDSQMKVVGIVAMKDVMKQQTADTIETLMTPLPVVVNPTTSVAAAAHQMIW 278
Query: 211 TKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
+ LPVVD L+G+ITR +V++A I+ +MG
Sbjct: 279 EGFDGLPVVDTQQHLLGMITRRDVLKALQMIQQQPQMG 316
>gi|220905178|ref|YP_002480490.1| hypothetical protein Ddes_1916 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869477|gb|ACL49812.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 219
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 17/137 (12%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
+++ + + PV+DD ++VG++SD D+ P +T + E+
Sbjct: 25 KLMKDHHVRRLPVLDDKGRVVGIISDRDV-------------RDASPSKATTLDMY-EMH 70
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
LL++ K ++MT P+ V+ + +E AA ++L+ K LPVV+ GKLVGII+ +
Sbjct: 71 YLLAELKAK---NIMTANPMTVKPSDTVEQAALIMLDNKIGGLPVVEDSGKLVGIISDHD 127
Query: 234 VVRAALQIKHATEMGAQ 250
V +A + I A G Q
Sbjct: 128 VFKALVDITGARLGGLQ 144
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 6/55 (10%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGS 151
VKP+ TV++A + I+++ +I G PV++D KLVG++SD+D+ AL I+G+
Sbjct: 89 VKPSDTVEQAAL-----IMLDNKIGGLPVVEDSGKLVGIISDHDVFKALVDITGA 138
>gi|25011667|ref|NP_736062.1| hypothetical protein gbs1627 [Streptococcus agalactiae NEM316]
gi|77414837|ref|ZP_00790953.1| AcuB family protein [Streptococcus agalactiae 515]
gi|24413207|emb|CAD47286.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159114|gb|EAO70309.1| AcuB family protein [Streptococcus agalactiae 515]
Length = 219
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 26/157 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K L V P TTV EA ++L E + PV+++D +L+GLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEA-----ADLLREHHLRRLPVVEND-QLLGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S +T + E+ LL+KT + D+M V V + +LEDA
Sbjct: 50 ----GTMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
L++ K LPVVD +G+L GIIT +V +A L+I
Sbjct: 98 IYLMMSRKIGVLPVVD-NGQLYGIITDRDVFKAFLEI 133
>gi|418466974|ref|ZP_13037875.1| hypothetical protein SMCF_751 [Streptomyces coelicoflavus ZG0656]
gi|371552443|gb|EHN79690.1| hypothetical protein SMCF_751 [Streptomyces coelicoflavus ZG0656]
Length = 224
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
+L+E IT PV+D + + VG+VS+ DLL + G G D S PE + +
Sbjct: 28 HLLLEYDITAVPVVDGENRPVGVVSEADLL--QKMWG-GEPDGS--PEHAEWSRAAAAGK 82
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
+ +G LMT P+ RE+ ++ +AAR++ + +RL VVD +G+L G+++R +
Sbjct: 83 ADATDADG-----LMTSPPLCARESWSVVEAARVMARHRIKRLLVVDEEGRLAGVVSRSD 137
Query: 234 VVRAALQIKHA 244
++R L+ A
Sbjct: 138 LLRVFLRTDRA 148
>gi|218262310|ref|ZP_03476824.1| hypothetical protein PRABACTJOHN_02498 [Parabacteroides johnsonii
DSM 18315]
gi|218223461|gb|EEC96111.1| hypothetical protein PRABACTJOHN_02498 [Parabacteroides johnsonii
DSM 18315]
Length = 491
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 31/145 (21%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
E + P T V AL ++ E +I G PV+D+ LVG+V++ DL
Sbjct: 94 ENGMIYDPVTITRGKTVGDALGMMKEYKIGGIPVVDESDHLVGIVTNRDL---------- 143
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R + M VD ++++K N +V ++T+LE AA +L + K
Sbjct: 144 RFERDMNRSVD----------EVMTKEN-----------LIVADQSTDLEAAASILQQHK 182
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+LPVVD+ +LVG+IT ++ RA
Sbjct: 183 IEKLPVVDSQKRLVGLITYKDITRA 207
>gi|452949642|gb|EME55109.1| hypothetical protein H074_26412 [Amycolatopsis decaplanina DSM
44594]
Length = 201
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 18/126 (14%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A E+L EK T PV+D+D +L+G+V++ DL+ + FP+ + +
Sbjct: 23 AAELLAEKGFTALPVVDEDDRLIGIVTEADLI------------RNRFPDDVRSGRDPEA 70
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+ G VG +MT + N D R LL+ R +P+VD K+VGI+TR
Sbjct: 71 RPR-----PGLTVGQVMTMPATGMSTGANAADVGRALLDGHIRAMPIVDG-SKVVGIVTR 124
Query: 232 GNVVRA 237
G+ VRA
Sbjct: 125 GDFVRA 130
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
DLM+ V V + + AA LL E + LPVVD D +L+GI+T +++R
Sbjct: 5 DLMSAPVVTVTPGSTAKHAAELLAEKGFTALPVVDEDDRLIGIVTEADLIR 55
>gi|91774375|ref|YP_544131.1| CBS domain-containing protein [Methylobacillus flagellatus KT]
gi|91708362|gb|ABE48290.1| CBS domain containing membrane protein [Methylobacillus flagellatus
KT]
Length = 410
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDY 140
G T GD M+ ++ V+ T ++EA+ +L+ I PVID +++G+++ +
Sbjct: 246 GEITCGDIMS--RDVVSVEYGTLLEEAW-----PLLLNHHIKALPVIDRAHRVIGIITRF 298
Query: 141 DLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
D + A+ +P + + F L+ ++VG +MT + V E T+
Sbjct: 299 DFMK--------HANLEAYPGFEEKLRKFIRRTFLVETDKPEVVGQIMTSKVLTVSEDTH 350
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGA 249
+ LL E +PV+D + +LVGI+T+ +++ AAL E GA
Sbjct: 351 IVQLVPLLSERGIHHVPVLDHERRLVGIVTQTDLI-AALYRGRLEETGA 398
>gi|375096602|ref|ZP_09742867.1| CBS-domain-containing membrane protein [Saccharomonospora marina
XMU15]
gi|374657335|gb|EHR52168.1| CBS-domain-containing membrane protein [Saccharomonospora marina
XMU15]
Length = 225
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 84 TVGDFMTTKEELHVVKPTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
TV D M +P TVD + + +L E RI+ V+D+ +G+VS+ DL
Sbjct: 5 TVADVMK--------RPVVTVDAQTPFKDIVSLLAEHRISAVAVVDEGRHPLGVVSEADL 56
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
LA + G+ S+F E+ W+ + +K G ++MT + L
Sbjct: 57 LAKEDQRGTAHP-PSVFTEL-RRWRRW-------TKARGATAREVMTRHVRTIHREEPLA 107
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNV----VRAALQIKHATE 246
AAR L E + RRL V+D+ G LVG++ R +V +R +IK A E
Sbjct: 108 VAARRLAEGRLRRLFVIDSSGTLVGVLARRDVLGVFLRPDEEIKRAVE 155
>gi|384097620|ref|ZP_09998740.1| signal transduction protein with cbs domains [Imtechella
halotolerans K1]
gi|383836502|gb|EID75909.1| signal transduction protein with cbs domains [Imtechella
halotolerans K1]
Length = 154
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 31/158 (19%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
+V D MTTK L +KP ++ E + + +E +ITG PV+D +LVG++SD D +
Sbjct: 22 SVRDHMTTK--LVTLKPDQSLIEV-----INLFMENKITGAPVVDVAGRLVGIISDSDCM 74
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
S GR N + N + V D MT + + D
Sbjct: 75 KQIS---EGRYFN-------------------MPIANMR-VADYMTKEVQTIDPDKTIFD 111
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
AA +T +RR PV++ DG+L+G I+R +V+ AAL++
Sbjct: 112 AAAEFFKTHHRRFPVIE-DGELIGQISRKDVMLAALKM 148
>gi|410029632|ref|ZP_11279462.1| hypothetical protein MaAK2_10523 [Marinilabilia sp. AK2]
Length = 152
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 24/140 (17%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
E + LE+L +++I+G PV+D D +L+G++S+ D L I ++ FP
Sbjct: 36 EDSIDHVLEVLTKRKISGAPVVDKDGRLIGIISEVD--CLKEIIKGKYSNTPKFPGT--- 90
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
V D MT + +L DAA+ LE K RR PV+ D +L
Sbjct: 91 ------------------VADHMTEDVFTLSPDLSLFDAAQKFLELKIRRFPVL-KDDRL 131
Query: 226 VGIITRGNVVRAALQIKHAT 245
VG I+ +V+RA ++K T
Sbjct: 132 VGQISLSDVIRAFPKLKSTT 151
>gi|410464699|ref|ZP_11318104.1| hypothetical protein B193_2630 [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409982185|gb|EKO38669.1| hypothetical protein B193_2630 [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 413
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
+E+L+ + + PV+D K+VG+V+ DLL +S A S+F + + +
Sbjct: 133 VELLLSRHVKAVPVVDGGRKVVGVVTGGDLLTRGGLS----ARLSLFGLLPADAREEAA- 187
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
+ +G V ++MT + E T+L +A+ +++ +RLPVVD G+L+GI++R
Sbjct: 188 ----AALSGHTVTEVMTSPAETIGERTSLREASERMVKRGLKRLPVVDEAGELIGIVSRT 243
Query: 233 NVVRAALQI 241
+++RAA ++
Sbjct: 244 DILRAAAKV 252
Score = 36.6 bits (83), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 62/155 (40%), Gaps = 9/155 (5%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
+T G ++ L PT DE+ + A LV + V+D K+ G+V D DL
Sbjct: 263 FTAGLMQQARDVLITDVPTARPDESLLDVAAR-LVASPLRRVVVLDAAGKVAGIVHDGDL 321
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
LA R + P + + + G+ M V E L
Sbjct: 322 LA--------RCGPAKRPGILRALFGKKDDDEAAGVCPVGTAGEAMQSKVYSVAEDAALT 373
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
D + ++ +RL V D DGKL G++ R V+RA
Sbjct: 374 DVLQKMIVHGVKRLVVTDDDGKLRGMVDREAVLRA 408
>gi|345868322|ref|ZP_08820314.1| CBS domain pair family protein [Bizionia argentinensis JUB59]
gi|344047243|gb|EGV42875.1| CBS domain pair family protein [Bizionia argentinensis JUB59]
Length = 156
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 31/158 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MT +L KP TVDE + L+ +I+G PV++ +LVG++S+ D L
Sbjct: 24 VSDYMT--RDLITFKPEHTVDEV-----IHALIANKISGGPVVNAKNELVGIISEGDCL- 75
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
K E +VG+ M + ++ +A
Sbjct: 76 ----------------------KQITESHYYNMPVEQDVVGNRMVKNVETIDGDMDVFEA 113
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
A+ L +K RR P+V+ +GKLVG I++ ++++AA+Q+K
Sbjct: 114 AKKFLNSKIRRFPIVE-EGKLVGQISQKDILKAAMQLK 150
>gi|167629788|ref|YP_001680287.1| cbs domain [Heliobacterium modesticaldum Ice1]
gi|167592528|gb|ABZ84276.1| cbs domain [Heliobacterium modesticaldum Ice1]
Length = 151
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 20/150 (13%)
Query: 94 ELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 153
E++ V P T V + +++++EKRI+G PVI ++G++S+ DLL D
Sbjct: 10 EVYTVYPDTPVADV-----VKLMIEKRISGVPVISRQGDVIGIISEGDLLFKDK------ 58
Query: 154 ADNSMFPEVDSTW--KTFNEVQKLLSKTNGKMVG----DLMTPAPVVVRETTNLEDAARL 207
+ +P S + E K ++ K + ++MT + V E + + A L
Sbjct: 59 --DLRYPSFISLLGGMIYLESPKRFAEEFRKSIALRAEEIMTGDVITVEEEARVSEMAGL 116
Query: 208 LLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ E + RLPV+ +GKLVGI+TR +++RA
Sbjct: 117 MTEQQVNRLPVL-RNGKLVGIVTRADILRA 145
>gi|88808652|ref|ZP_01124162.1| CBS domain protein [Synechococcus sp. WH 7805]
gi|88787640|gb|EAR18797.1| CBS domain protein [Synechococcus sp. WH 7805]
Length = 156
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVG+ M+ + V P T + +A +L + I+G PV+ DD LVG +++ +L+
Sbjct: 6 TVGEVMSAP--VLTVTPATPLKDAVT-----LLSDHHISGVPVVGDDGTLVGELTEQNLM 58
Query: 144 ALDSISGSGRA----DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 199
+S +G D+ ++ W +V ++L G V DLM+ ++
Sbjct: 59 VRESGVDAGPYVMLLDSVIYLRNPLNWD--KQVHQVL----GNTVADLMSRDSHCCAQSL 112
Query: 200 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
L AA +L E +RL VVD + + VG++TRG+VVRA
Sbjct: 113 PLPKAASMLHEKGTQRLIVVDEERRPVGMLTRGDVVRA 150
>gi|14590227|ref|NP_142293.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus horikoshii OT3]
gi|6647544|sp|O58045.1|IMDH_PYRHO RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH
gi|109157383|pdb|2CU0|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Pyrococcus Horikoshii Ot3
gi|109157384|pdb|2CU0|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Pyrococcus Horikoshii Ot3
gi|3256697|dbj|BAA29380.1| 486aa long hypothetical inosine-5'-monophosphate dehydrogenase
[Pyrococcus horikoshii OT3]
Length = 486
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 42/144 (29%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKR-ITGFPVIDDDWKLVGLVSDYDLLALDSISGS 151
E++ + P TVD A L+EK I G PV++D+ K+VG+++ D+ A +
Sbjct: 101 EDVITIAPDETVDFAL------FLMEKHGIDGLPVVEDE-KVVGIITKKDIAARE----- 148
Query: 152 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
GK+V +LMT + V E+ +E+A ++++E
Sbjct: 149 -----------------------------GKLVKELMTKEVITVPESIEVEEALKIMIEN 179
Query: 212 KYRRLPVVDADGKLVGIITRGNVV 235
+ RLPVVD GKLVG+IT ++V
Sbjct: 180 RIDRLPVVDERGKLVGLITMSDLV 203
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 99 KPTTTVDEAF-VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
K TV E+ V AL+I++E RI PV+D+ KLVGL++ DL+A + R +N
Sbjct: 158 KEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKKYKNAVRDENG 217
>gi|448536098|ref|ZP_21622343.1| peptidase M50 [Halorubrum hochstenium ATCC 700873]
gi|445702541|gb|ELZ54485.1| peptidase M50 [Halorubrum hochstenium ATCC 700873]
Length = 400
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 35/154 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVGD MT +E+LH V +V E + + ++R TG+PV+D D +LVG+V+ D
Sbjct: 255 TVGDVMTPREDLHTVSGDASVAEL-----MSRMFKERHTGYPVLDGD-ELVGMVTLEDA- 307
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ EV++ + + M DL+ P +
Sbjct: 308 -----------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALT 339
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
A + + E RLPVVDADG+LVG+I+R +++ A
Sbjct: 340 ALQTMQEHGVGRLPVVDADGELVGLISRSDLMTA 373
>gi|441146167|ref|ZP_20964057.1| putative CBS domain-containing protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440620746|gb|ELQ83771.1| putative CBS domain-containing protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 227
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVS 138
G++TV D MT H V A + ++ + +++ PV++ + +++G+VS
Sbjct: 11 EHGLHTVSDVMT-----HTV--VAVGRNAPFKEIVRMMEQWKVSALPVLEGEGRVIGVVS 63
Query: 139 DYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVR 196
+ DLL + DS F + ++L L+K G+LM+ + V
Sbjct: 64 EADLLPKEEFR-------------DSDPSRFEQRRRLEDLAKAGALTAGELMSAPAICVH 110
Query: 197 ETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
L AAR++ +RLPV DA G L G+I+R ++++ L+
Sbjct: 111 ADAALPQAARIMAVRHVKRLPVTDAQGLLQGVISRSDLLKVFLR 154
>gi|386844837|ref|YP_006249895.1| transport protein [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|374105138|gb|AEY94022.1| putative transport protein [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451798127|gb|AGF68176.1| putative transport protein [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 224
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDSISGSGRADNSMFPEVDSTWKTFNEV 172
+L E +T PV+D+ + +G+VS+ DLL + D SGR + P +++ W+
Sbjct: 29 LLEENGVTAVPVVDELDRPLGVVSEADLLRKSADQADPSGR---TPIPHLEA-WER---- 80
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
+K G +LM+ V R + +AARL+ +RLPVVD +L+GI++RG
Sbjct: 81 ----AKAEGSRAEELMSAPAVCARPEWTVVEAARLMETQNVKRLPVVDETDRLLGIVSRG 136
Query: 233 NVVRAALQIKHA 244
+++R L+ A
Sbjct: 137 DLLRVFLRRDEA 148
>gi|262197635|ref|YP_003268844.1| hypothetical protein [Haliangium ochraceum DSM 14365]
gi|262080982|gb|ACY16951.1| CBS domain containing membrane protein [Haliangium ochraceum DSM
14365]
Length = 640
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 75/167 (44%), Gaps = 31/167 (18%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVID 128
G L ++ G TVG FM+T +L V P VD A ++ + I PV D
Sbjct: 490 GQLRSDDDWRRHGYRTVGQFMST--DLFTVHPEDLVD-----LAASVMDWEHIRHVPVED 542
Query: 129 DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLM 188
D LVG+++ LL L + G+ L+ ++ V D+M
Sbjct: 543 DHGSLVGIITHRTLLRLMARRGTN-----------------------LAASSPVAVRDIM 579
Query: 189 TPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
APV V T DA R++ E K LPVVD D KLVGIIT +++
Sbjct: 580 RVAPVTVSPDTLTIDAIRMMREQKIGCLPVVDGD-KLVGIITESDLL 625
>gi|377810706|ref|YP_005043146.1| signal-transduction protein [Burkholderia sp. YI23]
gi|357940067|gb|AET93623.1| signal-transduction protein [Burkholderia sp. YI23]
Length = 227
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 70/117 (59%), Gaps = 5/117 (4%)
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
I+G PV+D+ KL+G++++ DL+ I G+G + + ++ ++ +E+ K +
Sbjct: 32 ISGMPVVDETGKLLGMITEGDLMHRAEI-GTGVKHRAWWLDMVAS---TSELASQYVKEH 87
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
K V DLMT V ET + D A LL + +R+PV+ DGK+VGI++R N++RA
Sbjct: 88 AKTVKDLMTTDITTVTETCPVGDIAELLERRRIKRVPVMR-DGKVVGIVSRSNLIRA 143
>gi|153872441|ref|ZP_02001333.1| acetoin utilization protein AcuB [Beggiatoa sp. PS]
gi|152071093|gb|EDN68667.1| acetoin utilization protein AcuB [Beggiatoa sp. PS]
Length = 155
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 27/155 (17%)
Query: 88 FMTTKE----ELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
MT KE EL+ +KP TV EA ++++ ++I PVID+ +L+GL+S D+L
Sbjct: 1 MMTVKELMSRELYTLKPDDTVHEAR-----QLMLSQQIRHIPVIDEQEQLIGLLSQRDVL 55
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
A SIS + E++S G + +MT V+ E T+L +
Sbjct: 56 AA-SISTLADLETQEREELES----------------GIPINKIMTTNVVIAEEDTSLLN 98
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
A + +L K LPV+ +L+GI+T + V+ A
Sbjct: 99 ATQFMLSQKQGCLPVLRG-KQLIGILTETDFVKLA 132
>gi|347523979|ref|YP_004781549.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
gi|343460861|gb|AEM39297.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
Length = 294
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 34/144 (23%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
++L +KP ++ EA +IL EK I G PVIDD+ +L+G+++ D+ G
Sbjct: 178 KQLITLKPNMSIREAA-----KILSEKMIRGAPVIDDEGRLIGIITLADIA---KAVAEG 229
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
R D V + M+ V VRE ++ DA RL+ + +
Sbjct: 230 RLDAK--------------------------VEEYMSKEVVTVREDQDILDAIRLMQKYR 263
Query: 213 YRRLPVVDADGKLVGIITRGNVVR 236
RL V+DA GKL GI+TR +++R
Sbjct: 264 IGRLVVLDAMGKLKGIVTRTDILR 287
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
VG + + + ++ ++ +AA++L E R PV+D +G+L+GIIT ++ +A
Sbjct: 172 VGSIASKQLITLKPNMSIREAAKILSEKMIRGAPVIDDEGRLIGIITLADIAKA 225
>gi|290955600|ref|YP_003486782.1| hypothetical protein SCAB_10371 [Streptomyces scabiei 87.22]
gi|260645126|emb|CBG68212.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 209
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 22/158 (13%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
YTV D MT H V +A +++ + +++ PV++ + ++VG+VS+ DL
Sbjct: 7 YTVSDVMT-----HTV--VAVGRDAPFKEIVQLFDQWKVSALPVLEGEGRVVGVVSEADL 59
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
L F + D F + K + T G+LM V V +L
Sbjct: 60 L-----------HKEEFRDADERQGDFADRLKAGAVT----AGELMNAPAVSVHPDASLA 104
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+AAR++ K +RLPVVD G L G+++RG++++ L+
Sbjct: 105 EAARIMARRKVKRLPVVDRVGMLQGVVSRGDLLKVFLR 142
>gi|60686976|gb|AAX35684.1| CBS domain-like protein [Acidithiobacillus caldus]
Length = 158
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P E V IL+E RI G PV D + +L+G+V++ DL+ RA +
Sbjct: 11 PIQIAPETAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLV--------HRAADERL 62
Query: 160 PEVDSTWK------TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 213
+S WK F KT G+ +MT + V ++ AARLL +
Sbjct: 63 EPRESVWKENFYRSVFRRRTPETDKTEGRTAAQVMTREVLTVAPEDHVTVAARLLADHNI 122
Query: 214 RRLPVVDADGKLVGIITRGNVVR 236
+ LPV++ + +L+GII+R ++++
Sbjct: 123 KSLPVIENE-RLIGIISRFDLIK 144
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
V DLMTP P+ + T + + AR+L+E + +PV D +G+L+GI+T G++V A
Sbjct: 3 VRDLMTPNPIQIAPETAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLVHRA 57
>gi|367474641|ref|ZP_09474136.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365273015|emb|CCD86604.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 141
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 20/114 (17%)
Query: 124 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 183
+PV+++D +++G+V+ +D+L + + N M P L+++T
Sbjct: 41 YPVVEND-EVIGIVTKFDVLKCFAFTP-----NQMLPRY----------SDLMNRT---- 80
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
VGD+MT + VR T L +L++E + R LPV D D +LVGII R ++VRA
Sbjct: 81 VGDVMTSEFIYVRPDTKLTRVLQLMVEHRIRSLPVTDGDSRLVGIIAREDLVRA 134
>gi|303245552|ref|ZP_07331835.1| putative signal transduction protein with CBS domains
[Desulfovibrio fructosovorans JJ]
gi|302492815|gb|EFL52680.1| putative signal transduction protein with CBS domains
[Desulfovibrio fructosovorans JJ]
Length = 220
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 22/152 (14%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
KP T++ +A +++ E PV+DD+ +LVG+VSD D+ A S
Sbjct: 15 KPATSIMKAA-----KMMKENGYHRLPVVDDNGRLVGIVSDRDI---------KEASPSK 60
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
+D +E+ LLS+ +GD+MT V V +E AA LLL LPV
Sbjct: 61 ATTLD-----MHELYYLLSEIK---IGDIMTKTVVAVTPDDTVEKAAVLLLRHNVGGLPV 112
Query: 219 VDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
VD D K+VG+IT ++ + + I G Q
Sbjct: 113 VDDDNKVVGVITDSDIFKVLVSITGVLNGGLQ 144
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 38/56 (67%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
++ D M+ +PV + T++ AA+++ E Y RLPVVD +G+LVGI++ ++ A+
Sbjct: 2 LIKDWMSKSPVTAKPATSIMKAAKMMKENGYHRLPVVDDNGRLVGIVSDRDIKEAS 57
>gi|390444607|ref|ZP_10232382.1| hypothetical protein A3SI_12194 [Nitritalea halalkaliphila LW7]
gi|389664305|gb|EIM75806.1| hypothetical protein A3SI_12194 [Nitritalea halalkaliphila LW7]
Length = 153
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 30/162 (18%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVG M+TK L +P E V +E+ +K+I+G PV+DD KL+G++S+ D L
Sbjct: 21 TVGACMSTK--LITFRP-----EDPVLKVVEVFAQKKISGAPVVDDAGKLIGMISEGDCL 73
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ I G+ N+ P+ ST V + MT +++ +L +
Sbjct: 74 Q-EVI--RGKYSNT--PQYPST------------------VENYMTREVRTLQQDMSLFE 110
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
AA+ K RR PV+ A G+LVG I+ +V+R +++ T
Sbjct: 111 AAQAFRVEKVRRFPVLSASGQLVGQISISDVIRVFARLQATT 152
>gi|422848126|ref|ZP_16894802.1| CBS domain protein [Streptococcus sanguinis SK115]
gi|422851118|ref|ZP_16897788.1| CBS domain protein [Streptococcus sanguinis SK150]
gi|422878252|ref|ZP_16924718.1| CBS domain protein [Streptococcus sanguinis SK1059]
gi|422928107|ref|ZP_16961049.1| CBS domain protein [Streptococcus sanguinis ATCC 29667]
gi|422931103|ref|ZP_16964034.1| CBS domain protein [Streptococcus sanguinis SK340]
gi|325690658|gb|EGD32659.1| CBS domain protein [Streptococcus sanguinis SK115]
gi|325694987|gb|EGD36891.1| CBS domain protein [Streptococcus sanguinis SK150]
gi|332367226|gb|EGJ44961.1| CBS domain protein [Streptococcus sanguinis SK1059]
gi|339617252|gb|EGQ21878.1| CBS domain protein [Streptococcus sanguinis ATCC 29667]
gi|339620285|gb|EGQ24855.1| CBS domain protein [Streptococcus sanguinis SK340]
Length = 218
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 26/166 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++
Sbjct: 3 VKDFMTRK--VVYISPNTTI-----AHAADMMREQKLHRLPVIEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+I+ + + +T + E+ LL+KT VGD+M V + + +LEDA
Sbjct: 50 -GTIAEASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
L+L+ K LPVVD + +L G+IT ++ +A L++ E G +
Sbjct: 98 TYLMLKNKIGILPVVDNE-QLYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|323351071|ref|ZP_08086728.1| CBS domain protein [Streptococcus sanguinis VMC66]
gi|401681231|ref|ZP_10813136.1| CBS domain protein [Streptococcus sp. AS14]
gi|422820741|ref|ZP_16868934.1| CBS domain protein [Streptococcus sanguinis SK353]
gi|422823062|ref|ZP_16871250.1| CBS domain protein [Streptococcus sanguinis SK405]
gi|422826857|ref|ZP_16875036.1| CBS domain protein [Streptococcus sanguinis SK678]
gi|422847223|ref|ZP_16893906.1| CBS domain protein [Streptococcus sanguinis SK72]
gi|422854801|ref|ZP_16901465.1| CBS domain protein [Streptococcus sanguinis SK160]
gi|322122795|gb|EFX94504.1| CBS domain protein [Streptococcus sanguinis VMC66]
gi|324991359|gb|EGC23292.1| CBS domain protein [Streptococcus sanguinis SK353]
gi|324993712|gb|EGC25631.1| CBS domain protein [Streptococcus sanguinis SK405]
gi|324994975|gb|EGC26888.1| CBS domain protein [Streptococcus sanguinis SK678]
gi|325687061|gb|EGD29084.1| CBS domain protein [Streptococcus sanguinis SK72]
gi|325696296|gb|EGD38187.1| CBS domain protein [Streptococcus sanguinis SK160]
gi|400187366|gb|EJO21561.1| CBS domain protein [Streptococcus sp. AS14]
Length = 218
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 26/166 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++
Sbjct: 3 VKDFMTRK--VVYISPNTTI-----AHAADMMREQKLHRLPVIEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+I+ + + +T + E+ LL+KT VGD+M V + + +LEDA
Sbjct: 50 -GTIAEASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
L+L+ K LPVVD + +L G+IT ++ +A L++ E G +
Sbjct: 98 TYLMLKNKIGILPVVDNE-QLYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|256828518|ref|YP_003157246.1| hypothetical protein Dbac_0707 [Desulfomicrobium baculatum DSM
4028]
gi|256577694|gb|ACU88830.1| CBS domain containing membrane protein [Desulfomicrobium baculatum
DSM 4028]
Length = 221
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 26/167 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
+ D+MT K TVD E + A +++ EK I PV+DD K++G++SD D+
Sbjct: 3 IKDWMT--------KDVITVDPETSMMRAAKLMKEKGIRRLPVVDDKGKVLGMLSDRDV- 53
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
A S +D +E+ LLS+ V ++MTP+P+ +RET +
Sbjct: 54 --------KEASPSKATTLD-----VHELYYLLSEIK---VKNIMTPSPLTIRETDTVVK 97
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
A ++ + K LPV++ +LVGI+T+ V L I G Q
Sbjct: 98 CAAIMHDKKISGLPVLNDKDELVGIMTQNEVYSVLLSITGIYHGGVQ 144
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
++ D MT + V T++ AA+L+ E RRLPVVD GK++G+++ +V A+
Sbjct: 2 IIKDWMTKDVITVDPETSMMRAAKLMKEKGIRRLPVVDDKGKVLGMLSDRDVKEAS 57
>gi|434404853|ref|YP_007147738.1| chloride channel protein EriC [Cylindrospermum stagnale PCC 7417]
gi|428259108|gb|AFZ25058.1| chloride channel protein EriC [Cylindrospermum stagnale PCC 7417]
Length = 892
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 24/116 (20%)
Query: 123 GFPVIDDDWKLVGLVSDYDLLAL-DSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNG 181
GFPV++++ KLVG+V+ DL + D + +G D + N
Sbjct: 484 GFPVVEEN-KLVGIVTQSDLQKMRDGLRPAG-GDRQL--------------------AND 521
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ + ++MTP P+ V NL LL + RLPV++A KL+GIITRG+++RA
Sbjct: 522 RHLKEIMTPQPITVTPQHNLSHVLYLLDRYQISRLPVMEAQ-KLIGIITRGDIIRA 576
>gi|403718964|ref|ZP_10943565.1| hypothetical protein KILIM_117_00050 [Kineosphaera limosa NBRC
100340]
gi|403208215|dbj|GAB98248.1| hypothetical protein KILIM_117_00050 [Kineosphaera limosa NBRC
100340]
Length = 199
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 22/142 (15%)
Query: 96 HVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 155
+ V+P + +D+A L+++ E+++T PV+D+ LVG++S+ DLL ++ RA
Sbjct: 12 YSVRPDSEIDDA-----LQLMAERKVTALPVVDEGEVLVGVLSEIDLLRR-AVEPDRRA- 64
Query: 156 NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 215
+ P VQ+ S + VG++MT AP E +++ D L + ++
Sbjct: 65 -HVLP-----------VQE--SAPLPRTVGEIMTSAPRSTTEGSDVADLITLFTTSSFKS 110
Query: 216 LPVVDADGKLVGIITRGNVVRA 237
LPVV + +LVG+I+R +V+RA
Sbjct: 111 LPVVRGN-QLVGVISRSDVIRA 131
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+V ++MT VR + ++DA +L+ E K LPVVD LVG+++ +++R A++
Sbjct: 2 LVREIMTSPAYSVRPDSEIDDALQLMAERKVTALPVVDEGEVLVGVLSEIDLLRRAVE 59
>gi|424828149|ref|ZP_18252890.1| CBS domain-containing protein [Clostridium sporogenes PA 3679]
gi|365979632|gb|EHN15685.1| CBS domain-containing protein [Clostridium sporogenes PA 3679]
Length = 138
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 32/138 (23%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V A ++ E + P+ +++ K+VG+++D D+ AL S++ R DN++
Sbjct: 20 VEKAAGLMSEYNVGSLPICENN-KVVGVITDRDI-ALRSVAK--REDNNI---------- 65
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
VGD+MT PVV + ++ DAAR++ E + RRLPV D + +VGI
Sbjct: 66 --------------KVGDIMTSNPVVANKDMDIHDAARIMSERQIRRLPVED-NQNIVGI 110
Query: 229 ITRGNVVRAALQIKHATE 246
++ G++ A++ KH E
Sbjct: 111 VSLGDI---AIEPKHENE 125
>gi|456392579|gb|EMF57922.1| CBS domain-containing protein [Streptomyces bottropensis ATCC
25435]
Length = 228
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 15/130 (11%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
+E + + R++ PV++ + +++G+VS+ DLL + DS + +
Sbjct: 32 VETMEQWRVSAMPVLEGEGRVIGVVSEADLLPKEEFR-------------DSDPSLYEQR 78
Query: 173 QKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+L ++K + G+LM+ V V T L AAR++ + +RLPVVD G L GI++
Sbjct: 79 GRLSAIAKAGAVVAGELMSTPAVTVHPDTTLSQAARIMAVRRVKRLPVVDDVGMLQGIVS 138
Query: 231 RGNVVRAALQ 240
R ++++ L+
Sbjct: 139 RADLLKVFLR 148
>gi|328952455|ref|YP_004369789.1| hypothetical protein Desac_0728 [Desulfobacca acetoxidans DSM
11109]
gi|328452779|gb|AEB08608.1| CBS domain containing membrane protein [Desulfobacca acetoxidans
DSM 11109]
Length = 151
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF----- 169
+L + +I G PV+DDD +LVG+++ DL+ RA P V +
Sbjct: 27 LLAQHKINGTPVVDDDGRLVGVITQTDLI--------DRAKKFQLPHVVTILDAHFYLER 78
Query: 170 -NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ +K L K G V D+MT + + ++++ A ++ LPV+ DG LVG+
Sbjct: 79 PSTFRKNLEKMLGNQVADVMTAPAITITPELSVDEVATIMAHRNAHTLPVLQ-DGNLVGV 137
Query: 229 ITRGNVVRAALQ 240
I + +++RA Q
Sbjct: 138 IGKIDIIRALSQ 149
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA--LQIKH 243
D+MT + V T++ D ARLL + K PVVD DG+LVG+IT+ +++ A Q+ H
Sbjct: 6 DIMTKTVITVTPQTSVLDLARLLAQHKINGTPVVDDDGRLVGVITQTDLIDRAKKFQLPH 65
>gi|422857902|ref|ZP_16904552.1| CBS domain protein [Streptococcus sanguinis SK1057]
gi|422859605|ref|ZP_16906249.1| CBS domain protein [Streptococcus sanguinis SK330]
gi|422870375|ref|ZP_16916868.1| CBS domain protein [Streptococcus sanguinis SK1087]
gi|327462076|gb|EGF08405.1| CBS domain protein [Streptococcus sanguinis SK1057]
gi|327470488|gb|EGF15944.1| CBS domain protein [Streptococcus sanguinis SK330]
gi|328946590|gb|EGG40728.1| CBS domain protein [Streptococcus sanguinis SK1087]
Length = 218
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 26/166 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++
Sbjct: 3 VKDFMTRK--VVYISPNTTI-----AHAADMMREQKLHRLPVIEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+I+ + + +T + E+ LL+KT VGD+M V + + +LEDA
Sbjct: 50 -GTIAEASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
L+L+ K LPVVD + +L G+IT ++ +A L++ E G +
Sbjct: 98 TYLMLKNKIGILPVVDNE-QLYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|124028008|ref|YP_001013328.1| hypothetical protein Hbut_1146 [Hyperthermus butylicus DSM 5456]
gi|123978702|gb|ABM80983.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
Length = 240
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 86/162 (53%), Gaps = 28/162 (17%)
Query: 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLV 137
P + V +FM + + V+PTT V + + ++++ KR PV+ + KL+G++
Sbjct: 104 PEKLMKPVEEFM--ERNVVYVEPTTPVYKVW-----QVMMSKRFAALPVVSEG-KLIGVI 155
Query: 138 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 197
+++DL+ + G R D +++ + +++ G +V +LM+ PV V
Sbjct: 156 AEHDLI----VRGFARPD----------FESPSGIRR------GPLVRELMSTPPVTVLP 195
Query: 198 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
T L AARL++E R+ VVD D L+G++ R ++VRA L
Sbjct: 196 TVPLLSAARLIVERYIGRVYVVDDDESLLGVVDRSDIVRAWL 237
>gi|390565046|ref|ZP_10245762.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
gi|390171708|emb|CCF85092.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
Length = 271
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 27/217 (12%)
Query: 24 SGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVSALRRSSAVFASGTLTANSAAPSSGVY 83
+GR +L L + G RV +++ RV LR + L + +G
Sbjct: 75 AGRLMAEQRLNPLPVVDAGGRVVGIIS----RVDVLRTVTEPGLGIGLVEPVGSVETGAG 130
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVG M+ + P D A + L L R V+D + + +G+++D +LL
Sbjct: 131 TVGAVMSRQ------VPAVGAD-AGLGDVLAALASSRQNRVVVVDGERRPIGVITDAELL 183
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT---NGKMVGDLMTPAPVVVRETTN 200
R + + P + ++KL + NG DLM P VR T
Sbjct: 184 R--------RVEPAAQPGLAQVL-----MRKLGHREVVPNGARAVDLMLPRGETVRAETP 230
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ +A RL+LE Y+ LPVVDA+G+LVG++ R +++RA
Sbjct: 231 VGEAIRLMLERAYKILPVVDAEGRLVGLVDRADLLRA 267
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 124 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 183
PV++ + +LVGLV+ DL+ G R + P +D + L +
Sbjct: 1 MPVVNREGRLVGLVTRGDLIE----RGGLRLRVELLPALDGA--AVERELRRLELESPMT 54
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
DLMT V VR T+L A RL+ E + LPVVDA G++VGII+R +V+R
Sbjct: 55 AADLMTRDVVTVRPETSLAAAGRLMAEQRLNPLPVVDAGGRVVGIISRVDVLR 107
>gi|149204515|ref|ZP_01881481.1| hypothetical protein RTM1035_00335 [Roseovarius sp. TM1035]
gi|149142014|gb|EDM30063.1| hypothetical protein RTM1035_00335 [Roseovarius sp. TM1035]
Length = 231
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSISGSGRADNSMFPEVDS 164
E + A+ ++++ I+ PV+D + L GLVS+ DL+ + G R S + EV
Sbjct: 17 EGQIEDAVRLMLDHNISALPVVDAEGDLKGLVSEGDLMRRVRETDGPRR---SWWLEV-- 71
Query: 165 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 224
+E + K V D+MT V V E TN+ + ARLL + + +R+PVV +D K
Sbjct: 72 -LGGASESAQDFVKLKSHRVEDVMTRDVVSVEEDTNVAEIARLLEKHRIKRVPVVRSD-K 129
Query: 225 LVGIITRGNVVRA--ALQ 240
+VGI++R N++ A ALQ
Sbjct: 130 VVGIVSRANLLHALSALQ 147
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MT + + V +EDA RL+L+ LPVVDA+G L G+++ G+++R
Sbjct: 5 DIMTTSVISVPLEGQIEDAVRLMLDHNISALPVVDAEGDLKGLVSEGDLMR 55
>gi|374326777|ref|YP_005084977.1| putative signal transduction protein with CBS domains [Pyrobaculum
sp. 1860]
gi|356642046|gb|AET32725.1| putative signal transduction protein with CBS domains [Pyrobaculum
sp. 1860]
Length = 276
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 31/128 (24%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V T ++ VEKR G PVIDD+ + +GL L+A
Sbjct: 169 VETYIKYFVEKRFRGIPVIDDNRRPIGL-----LMA------------------------ 199
Query: 169 FNEVQKLLSKTNGKM-VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 227
++V +LLS+ K VGD+M P ++E ++ +A RL++ + RL VVD++ +LVG
Sbjct: 200 -SKVMELLSRCELKARVGDVMMRDPPTIQEDEDVHEAIRLMVSSGIGRLLVVDSEDRLVG 258
Query: 228 IITRGNVV 235
IITR +V+
Sbjct: 259 IITRTDVL 266
>gi|307719578|ref|YP_003875110.1| hypothetical protein STHERM_c19020 [Spirochaeta thermophila DSM
6192]
gi|386347674|ref|YP_006045923.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
gi|306533303|gb|ADN02837.1| CBS domain containing protein [Spirochaeta thermophila DSM 6192]
gi|339412641|gb|AEJ62206.1| CBS domain containing membrane protein [Spirochaeta thermophila DSM
6578]
Length = 214
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 23/144 (15%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P TT+ +A E++ ++I PVID+ ++VG+VS+ DLL
Sbjct: 14 VTPATTLSDA-----QELMRREKIHRLPVIDEKGRVVGIVSEKDLLYAS----------- 57
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
P +T + E+ +LLSK K V + TP + V E T +EDAAR++++ LP
Sbjct: 58 --PSPATTLNVY-EMAQLLSKVRIKEV--MRTPV-ITVTEDTYIEDAARIMVDNNIGGLP 111
Query: 218 VVDADGKLVGIITRGNVVRAALQI 241
VV + KLVGIIT ++ + +++
Sbjct: 112 VVRGE-KLVGIITESDIFKRFVEL 134
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
V +MT PV V T L DA L+ K RLPV+D G++VGI++ +++ A+
Sbjct: 3 VAQVMTHNPVTVTPATTLSDAQELMRREKIHRLPVIDEKGRVVGIVSEKDLLYAS 57
>gi|297617214|ref|YP_003702373.1| signal transduction protein with CBS domains [Syntrophothermus
lipocalidus DSM 12680]
gi|297145051|gb|ADI01808.1| putative signal transduction protein with CBS domains
[Syntrophothermus lipocalidus DSM 12680]
Length = 153
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 76/131 (58%), Gaps = 10/131 (7%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
+ +E+ IT V+D+D K+ G+V+D D+LA + R + +V S + +
Sbjct: 25 IRCFLEEGITSAVVVDNDNKVKGIVTDGDILA------AVRQRRPVVVDVMSYFWAVGDD 78
Query: 173 QKLLSKTNG---KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
+ ++KT+ K V ++MT V V E T++ + ARL++E +++PVV + G++VG+I
Sbjct: 79 EDFVAKTDAVKQKKVKEIMTKHVVTVTEDTSIPEIARLMVENGIKQIPVVQS-GRIVGLI 137
Query: 230 TRGNVVRAALQ 240
R ++V+A +
Sbjct: 138 RRKDIVKAVAE 148
>gi|419966550|ref|ZP_14482472.1| hypothetical protein WSS_A30524 [Rhodococcus opacus M213]
gi|414568153|gb|EKT78924.1| hypothetical protein WSS_A30524 [Rhodococcus opacus M213]
Length = 185
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 31/140 (22%)
Query: 111 TALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 170
TA +L E PV+DD +LVG+++ D+L RA +
Sbjct: 22 TAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVL---------RAGTA------------- 59
Query: 171 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+ + VG++MT V L D +++LL R LPVVD DG++VGI++
Sbjct: 60 ---------SSETVGEVMTAPAVAAPMYQYLADVSKMLLHQGLRSLPVVDIDGRVVGILS 110
Query: 231 RGNVVRAALQIKHATEMGAQ 250
R +VVR L+ +GAQ
Sbjct: 111 RSDVVRLMLKPDETIAVGAQ 130
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 194 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
VVR++ ++ AA LL E + +PVVD +LVG++ G+V+RA
Sbjct: 13 VVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVLRAG 57
>gi|395777450|ref|ZP_10457965.1| putative CBS domain-containing protein [Streptomyces acidiscabies
84-104]
Length = 212
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSD 139
+G YTV D MT H V E + ++ ++ PV++ D +++G+VS+
Sbjct: 3 AGPYTVSDVMT-----HTVVAVGR--ETLFKDVVTLMERWKVAAVPVLEGDGRVIGVVSE 55
Query: 140 YDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 199
DLL + F E D E L+K G+ M+ V V
Sbjct: 56 ADLLPKEE-----------FRESDPDRAVQQERLADLAKAGALTAGESMSTPAVTVHADA 104
Query: 200 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
L +AAR++ + +RL V+DA+G L G+++R ++++ L+
Sbjct: 105 TLPEAARIMARRRVKRLYVIDAEGYLEGVVSRADLLKVFLR 145
>gi|300787350|ref|YP_003767641.1| hypothetical protein AMED_5479 [Amycolatopsis mediterranei U32]
gi|384150704|ref|YP_005533520.1| hypothetical protein RAM_27930 [Amycolatopsis mediterranei S699]
gi|399539233|ref|YP_006551895.1| hypothetical protein AMES_5414 [Amycolatopsis mediterranei S699]
gi|299796864|gb|ADJ47239.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340528858|gb|AEK44063.1| hypothetical protein RAM_27930 [Amycolatopsis mediterranei S699]
gi|398320003|gb|AFO78950.1| hypothetical protein AMES_5414 [Amycolatopsis mediterranei S699]
Length = 203
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 18/115 (15%)
Query: 122 TGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNG 181
T PV+DDD +L+G+V++ DL+ GR P +E + + G
Sbjct: 33 TALPVVDDDDRLIGIVTEADLI-------RGR-----IPVDPRHAHEHHE-----AASAG 75
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
K VGDLMT + T++ D + L++ + R +P+VD +VGI+TRG+VVR
Sbjct: 76 KTVGDLMTTPVTAMSTGTDVADLCQALVDARIRAMPIVDG-SAVVGIVTRGDVVR 129
>gi|307104772|gb|EFN53024.1| hypothetical protein CHLNCDRAFT_137521 [Chlorella variabilis]
Length = 1085
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 35/116 (30%)
Query: 119 KRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSK 178
K I G PV+D KLVG++S DL +
Sbjct: 74 KGIEGLPVVDAAGKLVGVLSRKDL-----------------------------------Q 98
Query: 179 TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
G +V D+M+ P+ ++ T AA +++ K RLPVVD +GK VGIITR ++
Sbjct: 99 KGGSVVQDVMSAQPIAMKATDRASAAAHSMIDHKIHRLPVVDDEGKCVGIITRTDI 154
>gi|320162383|ref|YP_004175608.1| hypothetical protein ANT_29820 [Anaerolinea thermophila UNI-1]
gi|319996237|dbj|BAJ65008.1| hypothetical protein ANT_29820 [Anaerolinea thermophila UNI-1]
Length = 218
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 18/142 (12%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V AL + + ++ +PV+D KL+G+V+D DL+ + S ++ S W
Sbjct: 20 VQEALARMRQDKVRRYPVVDKKGKLIGIVTDSDLM-----NASPSEATTL-----SVW-- 67
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
E+ LLS+ V +MT P+ V E T +E+AAR++ + K LPV+ D +LVGI
Sbjct: 68 --EINYLLSRIT---VERVMTREPITVTEDTTVEEAARIMADNKIGGLPVL-RDNRLVGI 121
Query: 229 ITRGNVVRAALQIKHATEMGAQ 250
IT ++ + L++ A G +
Sbjct: 122 ITETDLFKIFLEMLGARTAGVR 143
>gi|14520560|ref|NP_126035.1| hypothetical protein PAB2118 [Pyrococcus abyssi GE5]
gi|5457776|emb|CAB49266.1| Hypothetical protein, containing CBS domains [Pyrococcus abyssi
GE5]
gi|380741087|tpe|CCE69721.1| TPA: hypothetical protein PAB2118 [Pyrococcus abyssi GE5]
Length = 282
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 33/128 (25%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
AL+I + ++ FPV++ + KLVG++S
Sbjct: 23 ALDIFKKHKVRSFPVVNREGKLVGIIS--------------------------------- 49
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
++++L+ + + + L+ V+E +L+ AARL+LE YRR+ VVD +GK VGI+T
Sbjct: 50 IKRVLTNPDEEQLAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTV 109
Query: 232 GNVVRAAL 239
G++VR L
Sbjct: 110 GDIVRRYL 117
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 123 GFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN-- 180
PV+DD+ +L+G++ + DLL I ++ + + W + L K
Sbjct: 159 ALPVVDDNGELIGIIDETDLLRDSEIVRIMKS-TELAASSEEEWILESHPTLLFEKFELQ 217
Query: 181 --GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
K V ++MT +V + + A+ +++ + +LPV+ +G LVG+I ++++
Sbjct: 218 LPNKPVEEIMTKDVIVATPHMTVYEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLLKVL 277
Query: 239 LQIK 242
++ K
Sbjct: 278 VKAK 281
>gi|110634581|ref|YP_674789.1| hypothetical protein Meso_2233 [Chelativorans sp. BNC1]
gi|110285565|gb|ABG63624.1| CBS domain containing membrane protein [Chelativorans sp. BNC1]
Length = 232
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 18/150 (12%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D M+T+ T E + A +I+++ ++G PV+ DD +LVG++++ DLL
Sbjct: 5 DLMSTR-------CVTVSAENSIKHAAQIMLDHDLSGLPVLADDGRLVGIITEGDLLRRC 57
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
+ G+ +A + PE + +G VG +M+P V V E + + A
Sbjct: 58 EL-GNVKAGEELLPEKRARGYLHG---------HGWKVGHVMSPDVVAVTEDASADHIAE 107
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVR 236
L+ +R+PV+ D ++VGI++R ++++
Sbjct: 108 LMARHGIKRVPVLRGD-RVVGIVSRRDLLK 136
>gi|281412866|ref|YP_003346945.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga naphthophila RKU-10]
gi|281373969|gb|ADA67531.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga naphthophila RKU-10]
Length = 321
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 29/122 (23%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
EI+ KRI+G PV+DD ++VG+VS D++ ++ GS D+ V+
Sbjct: 40 EIMRIKRISGVPVVDDKKRVVGIVSLEDIIK--ALEGSYIKDS---------------VE 82
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
K MT V ++ET L+DA ++ + Y R PVVD + KLVGI+T+ +
Sbjct: 83 K------------RMTKNVVCLKETDTLQDAVKIFEKYGYGRFPVVDDEEKLVGIVTKHD 130
Query: 234 VV 235
++
Sbjct: 131 II 132
>gi|85707037|ref|ZP_01038126.1| hypothetical protein ROS217_03240 [Roseovarius sp. 217]
gi|85668478|gb|EAQ23350.1| hypothetical protein ROS217_03240 [Roseovarius sp. 217]
Length = 231
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSISGSGRADNSMFPEVDS 164
E + A+ ++++ I+ PV+D + L GLVS+ DL+ + G R S + EV
Sbjct: 17 EGQIEDAVRLMLDHNISALPVVDAEGDLKGLVSEGDLMRRVRETDGPRR---SWWLEV-- 71
Query: 165 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 224
+E + K V D+MT V V E TN+ + ARLL + + +R+PVV +D K
Sbjct: 72 -LGGASESAQDFVKFKSHRVEDVMTRDVVSVEEDTNVAEIARLLEKHRIKRVPVVRSD-K 129
Query: 225 LVGIITRGNVVRA--ALQ 240
+VGI++R N++ A ALQ
Sbjct: 130 VVGIVSRANLLHALSALQ 147
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MT + + V +EDA RL+L+ LPVVDA+G L G+++ G+++R
Sbjct: 5 DIMTTSVISVPLEGQIEDAVRLMLDHNISALPVVDAEGDLKGLVSEGDLMR 55
>gi|343083062|ref|YP_004772357.1| hypothetical protein [Cyclobacterium marinum DSM 745]
gi|342351596|gb|AEL24126.1| CBS domain containing protein [Cyclobacterium marinum DSM 745]
Length = 152
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 31/161 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMTT L T+D + +L KRI+G PV+DD+ +LVG++S+ D L
Sbjct: 22 VKDFMTT--NLITFSAEDTIDHV-----ITVLTRKRISGAPVVDDNGRLVGMISEGDCLK 74
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ I G + K + M ++ T P + ++ DA
Sbjct: 75 -EIIKGQ-----------------YTNTPKFPASVAEHMTTEVFTLPPEI-----SIFDA 111
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
A L K RR PVV D KL+G I+ ++VRA ++K +T
Sbjct: 112 ADRFLTLKIRRFPVV-KDQKLIGQISVSDIVRAMPKLKAST 151
>gi|209544346|ref|YP_002276575.1| putative signal transduction protein with CBS domains
[Gluconacetobacter diazotrophicus PAl 5]
gi|209532023|gb|ACI51960.1| putative signal transduction protein with CBS domains
[Gluconacetobacter diazotrophicus PAl 5]
Length = 236
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSISGSGRADNSMFPEVDSTWKT 168
A+ +++ R++ PV+ ++ LVG+V++ DL+ L++ SG G + +F S+ +
Sbjct: 23 AIGLMLTNRVSALPVVTENGLLVGVVTEGDLMRRSELETRSGHGWLGD-LF---RSSGRQ 78
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+E ++G+ V D+M+ PV V T L DA +LL R LPVV+ + ++VG+
Sbjct: 79 ASE----YVHSHGRKVFDIMSDQPVSVEPGTVLRDAVEVLLLRNIRHLPVVE-NNRVVGM 133
Query: 229 ITRGNVVRAAL 239
++R +V+RA L
Sbjct: 134 VSRTDVLRALL 144
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
V D+MT V V T +L DA L+L + LPVV +G LVG++T G+++R
Sbjct: 3 VRDIMTSPAVCVESTRSLADAIGLMLTNRVSALPVVTENGLLVGVVTEGDLMR 55
>gi|374580522|ref|ZP_09653616.1| drug resistance transporter, EmrB/QacA subfamily [Desulfosporosinus
youngiae DSM 17734]
gi|374416604|gb|EHQ89039.1| drug resistance transporter, EmrB/QacA subfamily [Desulfosporosinus
youngiae DSM 17734]
Length = 624
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSISGSGRADNSMFPEVDSTWKTF 169
+E +E R +G PVID+ ++G VSD D+L A + G + + + P+ + +
Sbjct: 491 IEKFIEYRTSGLPVIDNSRHIIGYVSDGDVLRYMAKQDVHVVGESFSLVLPDNE---EFM 547
Query: 170 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
++ ++LL + V ++ T + V +T+L + RL E K R++PV D LVG I
Sbjct: 548 SKARELLQRN----VLEIATKHTITVELSTSLAEVCRLFYEHKLRKIPVTQND-VLVGTI 602
Query: 230 TRGNVVRAALQ 240
+RG+ +R ++
Sbjct: 603 SRGDTMRYLMK 613
>gi|392392580|ref|YP_006429182.1| signal transduction protein [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523658|gb|AFL99388.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Desulfitobacterium dehalogenans ATCC 51507]
Length = 149
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 22/162 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D M T + + P T + E ++L + I+G PV+D L+G+VS+ DLL
Sbjct: 3 VQDIMKTN--VITISPNTEIREI-----AKLLCDHHISGVPVLDFFGNLIGIVSEGDLLH 55
Query: 145 LDSISGSGRADNSMFPEVDS------TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 198
+ N PE ++ + + L K ++MT + + +
Sbjct: 56 --------KETNPRVPEAVGFLGALIYYRGVKQYESDLKKLVALKASEIMTQEVITLNKD 107
Query: 199 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+E+AA L+++ +RLP+++ DGK++GII+R +V++ ++
Sbjct: 108 ATIEEAASLMIKHNVKRLPIME-DGKMIGIISRKDVIKVLIE 148
>gi|269469032|gb|EEZ80596.1| signal-transduction protein [uncultured SUP05 cluster bacterium]
gi|269469202|gb|EEZ80738.1| hypothetical protein Sup05_0144 [uncultured SUP05 cluster
bacterium]
Length = 148
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 17/130 (13%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS----TWKTFN 170
+++ I+G PV+DD LVG++S+ D+L MFP++D T+ F
Sbjct: 26 LMIMDHISGAPVVDDGNNLVGIISEKDIL------------QHMFPKLDEVMSDTYFDFE 73
Query: 171 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
++ T +G+LMT + AA + ++RR+PV GKLVGI++
Sbjct: 74 NMEHNYKDTMNVKIGELMTKEVASIDLDMPCLKAASTMWLKRFRRIPVTHK-GKLVGIVS 132
Query: 231 RGNVVRAALQ 240
G+V RA +
Sbjct: 133 IGDVHRAIFK 142
>gi|150400031|ref|YP_001323798.1| signal transduction protein [Methanococcus vannielii SB]
gi|150012734|gb|ABR55186.1| putative signal transduction protein with CBS domains
[Methanococcus vannielii SB]
Length = 153
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T + + +++ EK I+G P+++ + ++VG++S+ D++ SI+ + +
Sbjct: 11 PITLNKDDSIEKVIKLFREKSISGAPIVEGE-RIVGIISESDIIK--SITSHDERVSLVL 67
Query: 160 PE----VDSTWKTFNEVQKLLSKTNGKM---VGDLMTPAPVVVRETTNLEDAARLLLETK 212
P ++ KT +V++ + + + V + MT + + T + AA +++ K
Sbjct: 68 PSPFDLIELPLKTALKVEQFMEDIDNALKIEVWEAMTEKVITISPETTINKAAETMVKNK 127
Query: 213 YRRLPVVDADGKLVGIITRGNVVRAAL 239
+RLPVV+ +GKLVGIITRG+++ A +
Sbjct: 128 IKRLPVVE-NGKLVGIITRGDLIEAMV 153
>gi|452960137|gb|EME65467.1| hypothetical protein G352_10787 [Rhodococcus ruber BKS 20-38]
Length = 202
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 33/163 (20%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEI-LVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 147
M ++ +H +P TV + T + L E+ PV+DD +LVG+++ D+L
Sbjct: 1 MRVRDVMH--RPVATVHQGVPVTEAAVPLAEQGYAALPVLDDRDRLVGILTSGDVLR--- 55
Query: 148 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 207
T +E + + V ++MT V V +L DA+RL
Sbjct: 56 -------------------GTMSE--------DTRTVAEVMTAPVVAVAAYQDLADASRL 88
Query: 208 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
LL R +PVV+ DG +VGI++RG+++R L+ A + Q
Sbjct: 89 LLSRGLRSIPVVEDDGHVVGIVSRGDLLRLLLKPDEAIGVSVQ 131
>gi|14521857|ref|NP_127333.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus abyssi GE5]
gi|13878566|sp|Q9UY49.1|IMDH_PYRAB RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH
gi|5459077|emb|CAB50563.1| guaB inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP
dehydrogenase) (IMPDH) (IMPD) [Pyrococcus abyssi GE5]
gi|380742493|tpe|CCE71127.1| TPA: inositol-5-monophosphate dehydrogenase [Pyrococcus abyssi GE5]
Length = 485
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 42/144 (29%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKR-ITGFPVIDDDWKLVGLVSDYDLLALDSISGS 151
E++ + P TVD A L+EK I G PV++++ K+VG++S D+ A +
Sbjct: 101 EDVITISPEETVDFAL------FLMEKHDIDGLPVVENE-KVVGIISKKDIAARE----- 148
Query: 152 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
GK+V +LMT + V E +E+A ++++E
Sbjct: 149 -----------------------------GKLVKELMTKDVITVPENIEVEEALKIMIEN 179
Query: 212 KYRRLPVVDADGKLVGIITRGNVV 235
+ RLPVVD +G+L+G+IT ++V
Sbjct: 180 RIDRLPVVDKEGRLIGLITMSDLV 203
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 99 KPTTTVDEAF-VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
K TV E V AL+I++E RI PV+D + +L+GL++ DL+A + R +N
Sbjct: 158 KDVITVPENIEVEEALKIMIENRIDRLPVVDKEGRLIGLITMSDLVARKKYKNAVRDENG 217
>gi|170695632|ref|ZP_02886775.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
gi|170139431|gb|EDT07616.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
Length = 229
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
++ V+ I+G PV+D D +VG++S+ DLL I D + W +E +
Sbjct: 25 KMFVDNGISGAPVLDTDGSIVGIISEGDLLRRSEIG----TDETRRASWLDFWSARHEAR 80
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
+ KT+ V D+MT V V+ T L + A +L +R+PV + G++VGI++R N
Sbjct: 81 DYV-KTHAAKVSDVMTTDVVTVQPDTPLGEVAGILEARHVKRVPVTER-GQVVGIVSRAN 138
Query: 234 VVRA 237
+V+A
Sbjct: 139 LVQA 142
>gi|119774127|ref|YP_926867.1| acetoin utilization protein AcuB [Shewanella amazonensis SB2B]
gi|119766627|gb|ABL99197.1| acetoin utilization protein AcuB, putative [Shewanella amazonensis
SB2B]
Length = 140
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 18/124 (14%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
EI + PV+D+D L G++S+ DLL ++ P + + +T + +
Sbjct: 27 EIFDQASFHHLPVVDEDGTLSGMLSERDLL------------RAISPHIGAIGETNRDQE 74
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
LL K V +MT PV + +L+DA+ L+LE LPV++ DGKLVGIIT +
Sbjct: 75 TLL-----KRVHQVMTREPVTIAPHKSLDDASLLMLEYSIGSLPVLE-DGKLVGIITWKD 128
Query: 234 VVRA 237
++RA
Sbjct: 129 LLRA 132
>gi|86361220|ref|YP_473107.1| hypothetical protein RHE_PF00490 [Rhizobium etli CFN 42]
gi|86285322|gb|ABC94380.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 225
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V A+ ++++ ++G PV+DD ++ G+V++ DLL + + R + PE+ S
Sbjct: 20 VRHAVAMMLQNHVSGLPVVDDHGRVCGMVTEGDLLLRREVRYAPRPARA--PELISEI-- 75
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
++++ + +NG V D+M+ +V R + + D A L + +RLP+V+ D +LVGI
Sbjct: 76 --DLERYIG-SNGWCVADVMSQDVIVARPDSEVSDIAESLQVHRIKRLPIVE-DERLVGI 131
Query: 229 ITRGNVVR 236
++R +++R
Sbjct: 132 VSRRDILR 139
>gi|443310780|ref|ZP_21040420.1| chloride channel protein EriC [Synechocystis sp. PCC 7509]
gi|442779134|gb|ELR89387.1| chloride channel protein EriC [Synechocystis sp. PCC 7509]
Length = 891
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 48/169 (28%)
Query: 76 AAPSSGVYTVGDFMTTKEELHVVKP-------TTTVDEAFVPTALEILVEKRITGFPVID 128
AAP+ G+ +TT +V++P T T+DEA ++ GFPV+D
Sbjct: 433 AAPNQGL------LTTLTAENVMQPRVETLGATMTLDEA-----VQAFSRSHHRGFPVVD 481
Query: 129 DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLM 188
D KLVG+V+ D+ + + G S ++M
Sbjct: 482 DG-KLVGIVTQTDIAKMRDRTLPGDTHLS----------------------------EIM 512
Query: 189 TPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
TP+PV V + +L D LL K RLPV++ KL+GIITR +++RA
Sbjct: 513 TPSPVTVSPSASLSDVLYLLDRYKLSRLPVIEQK-KLIGIITRADIIRA 560
>gi|409399632|ref|ZP_11249902.1| hypothetical protein MXAZACID_02830 [Acidocella sp. MX-AZ02]
gi|409131251|gb|EKN00963.1| hypothetical protein MXAZACID_02830 [Acidocella sp. MX-AZ02]
Length = 235
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V+P T+V +A I++ ++G PV+D+ LVG+V++ DLL I G
Sbjct: 14 VQPRTSVADAA-----RIMLANHVSGLPVLDEAGVLVGVVTEGDLLRRAEIGTEGSPAGW 68
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ + + V T+ + V +MT +P+ +L + A+++L +RLP
Sbjct: 69 LKALLQPASVAADYV-----ATHSRHVSGVMTHSPIFATPEMSLGEVAQIMLRKHIKRLP 123
Query: 218 VVDADGKLVGIITRGNVVRA 237
V++ DGKL G+++R ++++A
Sbjct: 124 VLE-DGKLTGVVSRADLLKA 142
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
V ++MT + V+ T++ DAAR++L LPV+D G LVG++T G+++R A
Sbjct: 3 VSEVMTRNALSVQPRTSVADAARIMLANHVSGLPVLDEAGVLVGVVTEGDLLRRA 57
>gi|392542741|ref|ZP_10289878.1| hypothetical protein PpisJ2_13063 [Pseudoalteromonas piscicida JCM
20779]
gi|409201902|ref|ZP_11230105.1| hypothetical protein PflaJ_11189 [Pseudoalteromonas flavipulchra
JG1]
Length = 142
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 73/139 (52%), Gaps = 25/139 (17%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P T + V +A+E L++ +G PVID+ +++G +S+ D L
Sbjct: 13 RPVTFKQDMRVESAVEKLLQSGQSGGPVIDEARRVIGFLSEQDCLK-------------- 58
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
+++T++ NE ++S D+MT P+ V+ ++ A L++ K + PV
Sbjct: 59 -KMLEATYQ--NESHSVVS--------DVMTKEPLCVKREDSIVQMADLMICNKPKVYPV 107
Query: 219 VDADGKLVGIITRGNVVRA 237
VD +G+L+G+I+R NV+ A
Sbjct: 108 VDDEGRLLGVISRANVLLA 126
>gi|392412223|ref|YP_006448830.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
gi|390625359|gb|AFM26566.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
Length = 226
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 73/139 (52%), Gaps = 18/139 (12%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A+ +++E ++ FPV+++ KLVG+V+D DL RA S +D
Sbjct: 23 AINLMMEDHVSMFPVLEEG-KLVGIVTDRDL---------KRASPSDMARLD-------- 64
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+Q+++ + VG +M+ P+ V +E+AA +L+ K PV+D G++ G+IT+
Sbjct: 65 IQQIIYHVSRVEVGAIMSRYPITVPLNWTVEEAAEILMTNKISGCPVIDEKGEIRGLITK 124
Query: 232 GNVVRAALQIKHATEMGAQ 250
++ +A + + + G Q
Sbjct: 125 SDLFKALIALSGLSHRGFQ 143
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+V D MT V + T +L+ A L++E PV++ +GKLVGI+T ++ RA+
Sbjct: 2 LVKDWMTKKVVTLEVTDSLQHAINLMMEDHVSMFPVLE-EGKLVGIVTDRDLKRAS 56
>gi|429195455|ref|ZP_19187487.1| CBS domain protein [Streptomyces ipomoeae 91-03]
gi|428668821|gb|EKX67812.1| CBS domain protein [Streptomyces ipomoeae 91-03]
Length = 250
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 16/114 (14%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF----- 169
+L + RI+G PV+D+D K++G++S+ DL+A + + PE + F
Sbjct: 29 LLADHRISGLPVVDEDDKVIGVISETDLIARQAAT----------PEPYEPRRRFTFPGL 78
Query: 170 -NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 222
++ +KTN + G LMT + + +AAR + + + RLPV+D +
Sbjct: 79 TRGARRQAAKTNARTAGRLMTAPAITAHADDTIVEAARTMAQHQVERLPVLDEE 132
>gi|392390812|ref|YP_006427415.1| inosine-5''-monophosphate dehydrogenase [Ornithobacterium
rhinotracheale DSM 15997]
gi|390521890|gb|AFL97621.1| inosine-5''-monophosphate dehydrogenase [Ornithobacterium
rhinotracheale DSM 15997]
Length = 489
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D + E + P T + + A ++ RI+G PVI +D L+G++++ D+
Sbjct: 87 DMVKRSENGMIANPITLHPDQTLEDAENLMRTYRISGLPVIKEDRTLIGILTNRDIRY-- 144
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE-TTNLEDAA 205
+ D + K V D+MT AP+V + T+L+DA
Sbjct: 145 --------------QTDMSQK----------------VTDVMTKAPLVTSDINTSLDDAK 174
Query: 206 RLLLETKYRRLPVVDADGKLVGIIT 230
+LL+ + +LP+VD D KL+G+IT
Sbjct: 175 EILLKNRIEKLPIVDKDNKLIGLIT 199
>gi|220904801|ref|YP_002480113.1| hypothetical protein Ddes_1533 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869100|gb|ACL49435.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 223
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 17/137 (12%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
++L + RI PV+D D +VGL++ DL A F +T E
Sbjct: 25 KLLKDNRINYLPVVDRDNIVVGLIASADLKA--------------FAPQHTTGFEILEAL 70
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
+L++T V D+M APV + +E AA+ + + LPV+D + KLVGIIT +
Sbjct: 71 DILAETK---VKDVMVVAPVTIHYNNTVEQAAKTMFDRHVACLPVIDDEDKLVGIITGWD 127
Query: 234 VVRAALQIKHATEMGAQ 250
+ A L + A + G +
Sbjct: 128 IFHALLNMSGAEQGGEE 144
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 90 TTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 148
T +++ VV P T V A + + ++ + PVIDD+ KLVG+++ +D+ AL ++
Sbjct: 76 TKVKDVMVVAPVTIHYNNTVEQAAKTMFDRHVACLPVIDDEDKLVGIITGWDIFHALLNM 135
Query: 149 SGS 151
SG+
Sbjct: 136 SGA 138
>gi|344173267|emb|CCA88419.1| conserved hypothetical protein (cystathionine-beta-synthase-CBS
domain) [Ralstonia syzygii R24]
Length = 378
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
VP AL +L + PV+DD+ +L+G+V+ DL +G A + + W
Sbjct: 254 VPHALRLLQRHGVKALPVLDDEHRLIGIVTRADL--------TGTAPRARRQRLRD-WFA 304
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ VG +MTP + +R + D + + +PVVDA G+L GI
Sbjct: 305 IGAMTP-------PRVGGVMTPRVLTIRADAPMADLVPMFASAGHHHIPVVDAHGRLAGI 357
Query: 229 ITRGNVVRA 237
+T+ +++ A
Sbjct: 358 LTQADIIHA 366
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 173 QKLLSKT-NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
Q+ ++T + ++MTP+ V V T++ A RLL + LPV+D + +L+GI+TR
Sbjct: 225 QQAYARTFHALTCANIMTPSVVTVSAATSVPHALRLLQRHGVKALPVLDDEHRLIGIVTR 284
Query: 232 GNV 234
++
Sbjct: 285 ADL 287
>gi|328949777|ref|YP_004367112.1| hypothetical protein Marky_0241 [Marinithermus hydrothermalis DSM
14884]
gi|328450101|gb|AEB11002.1| CBS domain containing protein [Marinithermus hydrothermalis DSM
14884]
Length = 264
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 33/202 (16%)
Query: 54 DRVSALRRS-SAVFASGTLTANS------AAPSSGVYTVGDFMTTKEELHVVKPTTTVDE 106
DR LRR AVF+ N+ A V D+MT P T +
Sbjct: 13 DRADLLRRVVRAVFSRAEADRNADTALGGTARKEASMLVRDWMTPN-------PITVSPD 65
Query: 107 AFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 166
VP A+ ++ EK PV++ D +LVG+V+D DL P +T
Sbjct: 66 TPVPEAIRLMQEKGFRRLPVVNRD-RLVGIVTDRDL-------------KEAMPSKATTL 111
Query: 167 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 226
+ E+ L++K + ++M + V LEDAA L+ E K LPV++ GKLV
Sbjct: 112 SIW-EINYLIAKMP---ISEVMATPVITVEADKPLEDAALLMEERKIGGLPVLEG-GKLV 166
Query: 227 GIITRGNVVRAALQIKHATEMG 248
GIIT +V++A +++ E G
Sbjct: 167 GIITITDVLKAFVEVMGLKEGG 188
>gi|432342033|ref|ZP_19591340.1| hypothetical protein Rwratislav_33501, partial [Rhodococcus
wratislaviensis IFP 2016]
gi|430772939|gb|ELB88660.1| hypothetical protein Rwratislav_33501, partial [Rhodococcus
wratislaviensis IFP 2016]
Length = 173
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 33/164 (20%)
Query: 89 MTTKEELHVV-KPTTTVDEA-FVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
M T L+V+ +P V ++ + TA +L E PV+DD +LVG+++ D+L
Sbjct: 1 MVTMRVLNVMQRPVRVVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVL--- 57
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
RA + + + VG++MT V L D ++
Sbjct: 58 ------RAGTA----------------------SSETVGEVMTAPAVAAPMYQYLADVSK 89
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+LL R LPVVD DG++VGI++R +VVR L+ +GAQ
Sbjct: 90 MLLHQGLRSLPVVDIDGRVVGILSRSDVVRLMLKPDETIAVGAQ 133
>gi|326333121|ref|ZP_08199370.1| inosine-5'-monophosphate dehydrogenase [Nocardioidaceae bacterium
Broad-1]
gi|325949104|gb|EGD41195.1| inosine-5'-monophosphate dehydrogenase [Nocardioidaceae bacterium
Broad-1]
Length = 499
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 28/120 (23%)
Query: 118 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS 177
E RI+GFPV+D D KL+G++++ DL F V + W T + + S
Sbjct: 118 EYRISGFPVVDVDQKLIGIITNRDL---------------RFTPV-AEWATTKVNEVMTS 161
Query: 178 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
K DL+T + RE +A +LL + K RLP+VD DG++ G+IT + V++
Sbjct: 162 K-------DLITGPAEISRE-----EATKLLRQHKLERLPLVDTDGRITGLITVKDFVKS 209
>gi|218781404|ref|YP_002432722.1| hypothetical protein Dalk_3566 [Desulfatibacillum alkenivorans
AK-01]
gi|218762788|gb|ACL05254.1| CBS domain containing membrane protein [Desulfatibacillum
alkenivorans AK-01]
Length = 205
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
I+ ++G PV+D D ++G++S+ D L G+ + S + V
Sbjct: 84 IMEAANVSGVPVVDGDNFIMGIISEKDFLE----KMGGKKNGSFMGVIAECLSNRGCVAM 139
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
+ + + K D+MT + + + + + +++L E + R+PVVD G+LVGI++RG++
Sbjct: 140 PIREKSAK---DVMTFPVITAQRSNTISELSKMLAEHQINRIPVVDGKGRLVGIVSRGDI 196
Query: 235 VRA 237
V +
Sbjct: 197 VES 199
>gi|260771378|ref|ZP_05880304.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
gi|260613694|gb|EEX38887.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
Length = 357
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
+KP T+ +A LE+L + + T PV+DD+ +LVG+ S D L +N
Sbjct: 233 LKPNDTIHKA-----LELLQQNQFTALPVVDDEHELVGIFSLVDFL--------RSVENR 279
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
F DS + + + K K V M APV +R T++ LL + Y +P
Sbjct: 280 KF---DSFIALYLQAK----KKAMKEVSQFMNAAPVFMRTDTHIARTIP-LLTSGYHHIP 331
Query: 218 VVDADGKLVGIITRGNVVRAALQIK 242
+VD +L G++T+ +++ IK
Sbjct: 332 IVDNRNRLKGMVTQSDLIEFLYNIK 356
>gi|365875256|ref|ZP_09414785.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
Ag1]
gi|442588350|ref|ZP_21007162.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
R26]
gi|365756904|gb|EHM98814.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
Ag1]
gi|442562055|gb|ELR79278.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
R26]
Length = 486
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 69/131 (52%), Gaps = 31/131 (23%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T E + A ++ +I+G PV+D+D KL+G++++ D+ +
Sbjct: 100 PVTLSKEHTLGEAKGMMAHYKISGLPVVDNDNKLIGIITNRDV---------------KY 144
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
E D K V+++++K N +V ++T LE+A +LL+++ +LP+V
Sbjct: 145 QE-DLGLK----VEEIMTKDN-----------LIVSHKSTTLEEAKEILLKSRVEKLPIV 188
Query: 220 DADGKLVGIIT 230
D++ KLVG+IT
Sbjct: 189 DSENKLVGLIT 199
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
+ TK+ L V +TT++EA EIL++ R+ P++D + KLVGL++ D+
Sbjct: 155 IMTKDNLIVSHKSTTLEEA-----KEILLKSRVEKLPIVDSENKLVGLITIKDI 203
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
+AL + G G +M E + N+V + NG M+ D PV + + L
Sbjct: 62 IALARVGGLGFIHKNMPIE-----EQANQVNSVKRSENG-MISD-----PVTLSKEHTLG 110
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
+A ++ K LPVVD D KL+GIIT +V
Sbjct: 111 EAKGMMAHYKISGLPVVDNDNKLIGIITNRDV 142
>gi|422855005|ref|ZP_16901663.1| CBS domain protein [Streptococcus sanguinis SK1]
gi|422861990|ref|ZP_16908622.1| CBS domain protein [Streptococcus sanguinis SK408]
gi|422864959|ref|ZP_16911584.1| CBS domain protein [Streptococcus sanguinis SK1058]
gi|327462982|gb|EGF09303.1| CBS domain protein [Streptococcus sanguinis SK1]
gi|327474585|gb|EGF19990.1| CBS domain protein [Streptococcus sanguinis SK408]
gi|327490143|gb|EGF21931.1| CBS domain protein [Streptococcus sanguinis SK1058]
Length = 218
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 26/166 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++
Sbjct: 3 VKDFMTRK--VVYISPDTTI-----AHAADMMREQKLHRLPVIEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+I+ + + +T + E+ LL+KT VGD+M V + + +LEDA
Sbjct: 50 -GTIAEASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
L+L+ K LPVVD + +L G+IT ++ +A L++ E G +
Sbjct: 98 TYLMLKNKIGILPVVDNE-QLYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|316935762|ref|YP_004110744.1| hypothetical protein [Rhodopseudomonas palustris DX-1]
gi|315603476|gb|ADU46011.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
DX-1]
Length = 142
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 20/117 (17%)
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
+PV++D +++G+V+ YD L + + M P D L+++T
Sbjct: 38 FNAYPVVED-QRVIGMVTKYDFLNCFAFHPT-----QMLPHYDD----------LMNRT- 80
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
VGD+M+ + V T L +L++E + R +PV+DAD KL GII+R +V++A
Sbjct: 81 ---VGDIMSADFLYVHSDTKLTRVLQLMVEHQTRSIPVLDADRKLDGIISREDVIKA 134
>gi|440699101|ref|ZP_20881406.1| CBS domain protein [Streptomyces turgidiscabies Car8]
gi|440278407|gb|ELP66445.1| CBS domain protein [Streptomyces turgidiscabies Car8]
Length = 236
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 82 VYTVGDFMTTKE-ELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDY 140
++TVGD MT + + H P V + +L RI+G PV+D D K++G+VS
Sbjct: 3 IHTVGDVMTDEVVQAHRETPFKDV--------VRLLDAHRISGLPVVDHDDKVIGVVSGT 54
Query: 141 DLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
DL+ + + SG + + L+ T G++ + TPA + V
Sbjct: 55 DLVRGQA-ARSGGRRDRRYRLPRLRRPGRRAAPGALATTAGEL---MSTPA-ITVHPEQP 109
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+ DAAR++ RLPVVD + +L+GI TR +++R L+
Sbjct: 110 VPDAARVMERHGIERLPVVDEEDRLIGIATRRDLLRVFLR 149
>gi|383319118|ref|YP_005379959.1| transcriptional regulator [Methanocella conradii HZ254]
gi|379320488|gb|AFC99440.1| putative transcriptional regulator [Methanocella conradii HZ254]
Length = 253
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 18/138 (13%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P +A V ++++EK ++ P++D D LVG+VS+ D ++ + R+
Sbjct: 133 PIVAPPDARVSHIRKLMMEKGVSRVPIMDGDA-LVGMVSETD------VANAMRSIKKHS 185
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
P+ + N V+ L++ D+M + T+L+DAA+L+++ LPV+
Sbjct: 186 PQ----SRQDNNVELLIAM-------DIMRTNVITATPETSLKDAAKLMVDKDIGALPVL 234
Query: 220 DADGKLVGIITRGNVVRA 237
D G+LVGIITR ++VRA
Sbjct: 235 DGQGRLVGIITRRDIVRA 252
>gi|288561286|ref|YP_003424772.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
gi|288543996|gb|ADC47880.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
Length = 283
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 32/126 (25%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
++ E + G+PV+D++ +VG+++ YDLL D W+T
Sbjct: 36 LMKETKHDGYPVVDEEGHIVGIITAYDLLLKD-------------------WET------ 70
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
+ V +M+ +V RE ++ DA+R++ RLPVVD + + GI+T ++
Sbjct: 71 -------EYVKSIMSQEVIVAREDMHINDASRVMFRHGISRLPVVDKERHVKGIMTNTDI 123
Query: 235 VRAALQ 240
VR+ ++
Sbjct: 124 VRSHIE 129
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
V D MT + VR + D L+ ETK+ PVVD +G +VGIIT
Sbjct: 13 VRDYMTKNVITVRYDSLNNDVIALMKETKHDGYPVVDEEGHIVGIIT 59
>gi|226227050|ref|YP_002761156.1| hypothetical protein GAU_1644 [Gemmatimonas aurantiaca T-27]
gi|226090241|dbj|BAH38686.1| hypothetical protein GAU_1644 [Gemmatimonas aurantiaca T-27]
Length = 297
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 91 TKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 150
T EL V+P T +A + +A+ +V + G PV+D D ++VG++S+ +LL D +S
Sbjct: 162 TVRELMTVQPRTVGPDAPLKSAVLEMVRSGLGGLPVVDADNRVVGMLSERELLR-DLVSR 220
Query: 151 S-GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 209
RA P+ +T + + V DLMT + V L + A L+L
Sbjct: 221 YLPRAGGVATPQPPTTAR--------------RTVSDLMTRQVLCVAPDQPLAEVASLML 266
Query: 210 ETKYRRLPVVDADGKLVGIITRGNVVR 236
R+PVV D +LVG +TRG++VR
Sbjct: 267 NKDVDRVPVVKND-RLVGFLTRGDIVR 292
>gi|148242112|ref|YP_001227269.1| hypothetical protein SynRCC307_1013 [Synechococcus sp. RCC307]
gi|147850422|emb|CAK27916.1| CBS domain containing protein [Synechococcus sp. RCC307]
Length = 155
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 16/144 (11%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA--- 154
V P T + EA +++L E I+G PV+D KLVG +S+ L+A ++ +G
Sbjct: 18 VTPQTPLQEA-----VKLLSEHHISGLPVVDGG-KLVGELSEQQLMARETGFDAGPYVML 71
Query: 155 -DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 213
D+ ++ + W EV ++L G VG+LM P + L AA+LL + +
Sbjct: 72 LDSVIYLKNPLQWD--KEVHQVL----GNSVGELMAGHPHTCKPDLALPAAAKLLQDRRT 125
Query: 214 RRLPVVDADGKLVGIITRGNVVRA 237
+RL VVDA LVG++TRG+VVRA
Sbjct: 126 QRLFVVDAQQALVGVLTRGDVVRA 149
>gi|414152863|ref|ZP_11409190.1| putative signal transduction protein with CBS domains
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411455245|emb|CCO07092.1| putative signal transduction protein with CBS domains
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 148
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 75/136 (55%), Gaps = 21/136 (15%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS---------ISGSGRADNSMFPEVDS 164
+IL +K I+G PV++ + KLVG+V++ DLL ++ I G+ F VD
Sbjct: 25 QILTDKGISGVPVVNQEGKLVGIVTEGDLLHKEANPRIPKFFGILGA----MIYFGGVDQ 80
Query: 165 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 224
+ F ++ L + ++MT + V + T++ A L++E +R+PVV+ +GK
Sbjct: 81 YREDFKKLAALKA-------SEIMTSEVITVSKETDIRTIATLMIEHNIKRIPVVE-NGK 132
Query: 225 LVGIITRGNVVRAALQ 240
++GI++R ++++ Q
Sbjct: 133 VLGIVSRSDIIKTLTQ 148
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+M + V TN++D A++L + +PVV+ +GKLVGI+T G+++
Sbjct: 5 DIMKTDVITVTADTNIKDIAQILTDKGISGVPVVNQEGKLVGIVTEGDLLH 55
>gi|379721903|ref|YP_005314034.1| hypothetical protein PM3016_4103 [Paenibacillus mucilaginosus 3016]
gi|378570575|gb|AFC30885.1| CBS domain-containing protein [Paenibacillus mucilaginosus 3016]
Length = 152
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 77/138 (55%), Gaps = 15/138 (10%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V + + + +E RI+G PV++ K+VG +SD D++ GR ++ + V S + T
Sbjct: 21 VRSVIRMFLEHRISGVPVVNGRKKIVGYISDGDIMEY-----IGRHEDRV---VGSLFFT 72
Query: 169 F----NE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 222
F +E + +S+ V D+ T + V+ +E+ A +L + + ++LP V+
Sbjct: 73 FVFRGDEFGFDERISRILDLPVMDIATKKVITVQAEEPMENVAAILAQRQIKKLP-VEQH 131
Query: 223 GKLVGIITRGNVVRAALQ 240
G+LVGII+RG+V+R + +
Sbjct: 132 GELVGIISRGDVIRHSFK 149
>gi|375108537|ref|ZP_09754792.1| hypothetical protein AJE_01204 [Alishewanella jeotgali KCTC 22429]
gi|397170510|ref|ZP_10493923.1| hypothetical protein AEST_16890 [Alishewanella aestuarii B11]
gi|374571328|gb|EHR42456.1| hypothetical protein AJE_01204 [Alishewanella jeotgali KCTC 22429]
gi|396087753|gb|EJI85350.1| hypothetical protein AEST_16890 [Alishewanella aestuarii B11]
Length = 139
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 32/153 (20%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+M P T E V A++ L++ R TG PVID K++G +S+ D LA
Sbjct: 6 VADYMNRH-------PVTFDAEMPVEMAVDRLIKGRQTGGPVIDAQRKIIGFISEQDCLA 58
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+S T+++ Q V D+M + V+E + D
Sbjct: 59 RMLMS------------------TYHDQQ-------AARVSDVMRTEVLTVKEYDGIIDL 93
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
A+ +L+ K + PVVD +G L+GIITR +V+ A
Sbjct: 94 AQTMLKAKPKLYPVVDDNGHLLGIITRSDVLGA 126
>gi|390939688|ref|YP_006403425.1| inosine-5''-monophosphate dehydrogenase [Sulfurospirillum barnesii
SES-3]
gi|390192795|gb|AFL67850.1| inosine-5''-monophosphate dehydrogenase [Sulfurospirillum barnesii
SES-3]
Length = 482
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 33/135 (24%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
++ P + A + AL I+ E RI+G PVIDD L+G++++ DL R +N
Sbjct: 93 IIDPVSIKASATLRDALAIMSEYRISGVPVIDDTDTLIGILTNRDL----------RFEN 142
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRR 215
K V +LMT P++ V++ T L+DA + K +
Sbjct: 143 DY----------------------SKNVEELMTKMPLITVKKGTTLDDAEAIFRTNKVEK 180
Query: 216 LPVVDADGKLVGIIT 230
LPVVD + KL G+IT
Sbjct: 181 LPVVDENNKLAGLIT 195
>gi|20095036|ref|NP_614883.1| IMP dehydrogenase [Methanopyrus kandleri AV19]
gi|19888306|gb|AAM02813.1| IMP dehydrogenase [Methanopyrus kandleri AV19]
Length = 502
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 31/135 (22%)
Query: 101 TTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 160
T + DE+ V A+E++ + + G PV+D++ K+VG+++ R D +
Sbjct: 106 TISPDES-VKRAVELMEKHDVGGLPVVDEEGKVVGIIT--------------RRDVGLLS 150
Query: 161 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA-RLLLETKYRRLPVV 219
E E+ +L K+ +MT PVV+ E +LE+ A R++ E K R+PVV
Sbjct: 151 E--------EEIGELDVKS-------VMTEEPVVIEEGEDLEERALRVMREEKIERVPVV 195
Query: 220 DADGKLVGIITRGNV 234
D +G+L+GI+T +V
Sbjct: 196 DDEGRLLGIVTAKDV 210
>gi|389690038|ref|ZP_10179055.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
gi|388589556|gb|EIM29844.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
Length = 299
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 23/163 (14%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSD 139
S TV D MT ++ V T V E +L KRI+ PVI D +L+G+VS+
Sbjct: 70 SSPLTVADVMT--RDVVSVSTATPVSEIA-----NVLAGKRISAVPVIGADGRLLGIVSE 122
Query: 140 YDLLALDSISGSGRADNSMFPEVDSTW--KTFNEVQKLLS---KTNGKMVGDLMTPAPVV 194
DL+ I R W K +V+ + +T+G+ +M P V
Sbjct: 123 GDLIRRAEIGTERR----------RPWWRKVLTDVEAEAADYVRTHGRKAQHVMRPQVVT 172
Query: 195 VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
E L DAA ++ + + +R+PVV LVGI++R ++V+A
Sbjct: 173 ATEAMTLADAADIMEKRRLKRMPVVRG-SHLVGIVSRSDLVKA 214
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
V D+MT V V T + + A +L + +PV+ ADG+L+GI++ G+++R A
Sbjct: 75 VADVMTRDVVSVSTATPVSEIANVLAGKRISAVPVIGADGRLLGIVSEGDLIRRA 129
>gi|146339451|ref|YP_001204499.1| hypothetical protein BRADO2437 [Bradyrhizobium sp. ORS 278]
gi|365891704|ref|ZP_09430092.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|146192257|emb|CAL76262.1| conserved hypothetical protein with CBS domain [Bradyrhizobium sp.
ORS 278]
gi|365332322|emb|CCE02623.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 141
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 20/124 (16%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
E+ +PV+++D +++G+V+ +D+L + + N M P
Sbjct: 31 EMFDRDDFNTYPVVEND-EVIGIVTKFDVLKCFAFTP-----NQMLPRY----------S 74
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
L+++T V D+MT + VR T L +L++E + R LPV D D +LVGII R +
Sbjct: 75 DLMNRT----VADVMTSEFIYVRPDTKLTRVLQLMVEHRIRSLPVTDGDNRLVGIIARED 130
Query: 234 VVRA 237
+VRA
Sbjct: 131 IVRA 134
>gi|422875867|ref|ZP_16922337.1| CBS domain protein [Streptococcus sanguinis SK1056]
gi|332362303|gb|EGJ40103.1| CBS domain protein [Streptococcus sanguinis SK1056]
Length = 218
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 26/166 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++
Sbjct: 3 VKDFMTRK--VVYISPDTTI-----AHAADMMREQKLHRLPVIEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+I+ + + +T + E+ LL+KT VGD+M V + + +LEDA
Sbjct: 50 -GTIAEASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
L+L+ K LPVVD + +L G+IT ++ +A L++ E G +
Sbjct: 98 TYLMLKNKIGILPVVDNE-QLYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|326315657|ref|YP_004233329.1| CBS domain-containing membrane protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323372493|gb|ADX44762.1| CBS domain containing membrane protein [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 383
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 21/160 (13%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDY 140
G GD M+ + P T + A ++ +RI PV+D ++VG+V+
Sbjct: 236 GQLRCGDIMSRE-------PVTAAFGTGLQEAWALMRRRRIKALPVVDRARRIVGIVTTA 288
Query: 141 DLLA---LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 197
D + LD G G ++ V + T EV VG +MT VV E
Sbjct: 289 DFMRQIDLDVHQGIGEQLRALVRRVGAVHSTKPEV-----------VGQIMTRQVRVVSE 337
Query: 198 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ L E + +PV+DA+ +LVGIIT+ ++VRA
Sbjct: 338 QRPALELVPLFTEDGHHHIPVIDAERRLVGIITQSDLVRA 377
>gi|125718523|ref|YP_001035656.1| hypothetical protein SSA_1724 [Streptococcus sanguinis SK36]
gi|125498440|gb|ABN45106.1| CBS domain protein, putative [Streptococcus sanguinis SK36]
Length = 218
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 26/166 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++
Sbjct: 3 VKDFMTRK--VVYISPDTTI-----AHAADMMREQKLHRLPVIEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+I+ + + +T + E+ LL+KT VGD+M V + + +LEDA
Sbjct: 50 -GTIAEASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
L+L+ K LPVVD + +L G+IT ++ +A L++ E G +
Sbjct: 98 TYLMLKNKIGILPVVDNE-QLYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|225181720|ref|ZP_03735159.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
gi|225167591|gb|EEG76403.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
Length = 153
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
++++VE+ I+G PVID+ L+G+VS+ D++ L + M + NE
Sbjct: 24 IKLMVEQNISGIPVIDETGNLMGIVSESDVIRL-------KRKTHMPDYIQLLEAMLNEA 76
Query: 173 Q------KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 226
Q ++ N V D MT V V+E T L + RL++E R+PVV KL+
Sbjct: 77 QPEQFSADVIRSLNMP-VKDFMTKKVVTVKEDTTLAEITRLMVEHNINRIPVV-RKQKLL 134
Query: 227 GIITRGNVVRA 237
GI+TR + + A
Sbjct: 135 GIVTRRDAILA 145
>gi|294633519|ref|ZP_06712078.1| CBS domain-containing protein [Streptomyces sp. e14]
gi|292831300|gb|EFF89650.1| CBS domain-containing protein [Streptomyces sp. e14]
Length = 217
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF---PEVDSTWKTFNEV 172
L + ++ PV+DD + VGLVS+ DLL + +GR D + P D +E
Sbjct: 30 LADNGVSAVPVVDDLGRPVGLVSEADLLR----TVAGRPDPAGLLAEPRRDGVLGQASE- 84
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
G+LMT PV R ++ +AAR + +RLPVVD G LVGI++R
Sbjct: 85 --------EATAGELMTAPPVCARPGWSVVEAARTMDAHTVKRLPVVDETGVLVGIVSRA 136
Query: 233 NVVRAALQIKHA 244
+++R L+ A
Sbjct: 137 DLLRVFLRRDEA 148
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 180 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+ + V DLMT A V VR T+ +D R L + +PVVD G+ VG+++ +++R
Sbjct: 2 HHRTVEDLMTHAVVRVRRDTSFKDLVRTLADNGVSAVPVVDDLGRPVGLVSEADLLR 58
>gi|320353215|ref|YP_004194554.1| hypothetical protein Despr_1091 [Desulfobulbus propionicus DSM
2032]
gi|320121717|gb|ADW17263.1| CBS domain containing membrane protein [Desulfobulbus propionicus
DSM 2032]
Length = 151
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 15/132 (11%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF----- 169
+L+ +I+G PV+D+ K++G+V++ DL+ + P + F
Sbjct: 27 LLLSHKISGAPVVDEAGKVIGVVTESDLIFQNK--------KVHLPTAFAILDAFVFLEP 78
Query: 170 -NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ +++ L K G VGD+ + + V T+LE+ A L+ E K LPV+ A+G LVG+
Sbjct: 79 PDRMKEELRKMAGTRVGDICSTPLISVGPETDLEELATLMAEKKMHTLPVM-AEGTLVGV 137
Query: 229 ITRGNVVRAALQ 240
I + +++R Q
Sbjct: 138 IGKSDIIRTIAQ 149
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
D+MT + V T++ + A LLL K PVVD GK++G++T +++
Sbjct: 6 DIMTREVITVNARTSVRELAALLLSHKISGAPVVDEAGKVIGVVTESDLI 55
>gi|115523746|ref|YP_780657.1| signal-transduction protein [Rhodopseudomonas palustris BisA53]
gi|115517693|gb|ABJ05677.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris BisA53]
Length = 242
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 73/132 (55%), Gaps = 6/132 (4%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
EA + A I++++ ++G PV++D +L+G++S+ D + I G+ R +
Sbjct: 17 EASIVDAANIMLKQHVSGLPVVNDAGELIGVISEGDFIRRTEI-GTERKRGRWLRLLLGP 75
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
++ ++ +G+ V ++MT P V+ + + + + + +RLPV+ DG++
Sbjct: 76 GQSASD----FVHEHGRKVSEIMTSHPHTVQADATVSEIVKTMEKYHVKRLPVLQ-DGRM 130
Query: 226 VGIITRGNVVRA 237
VGI+TR N+++A
Sbjct: 131 VGIVTRKNLLKA 142
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+MT V V ++ DAA ++L+ LPVV+ G+L+G+I+ G+ +R
Sbjct: 6 IMTHDVVTVGPEASIVDAANIMLKQHVSGLPVVNDAGELIGVISEGDFIR 55
>gi|385260148|ref|ZP_10038297.1| CBS domain protein [Streptococcus sp. SK140]
gi|385192068|gb|EIF39478.1| CBS domain protein [Streptococcus sp. SK140]
Length = 218
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTV-----AHAADLMREQGLHRLPVIEND-KLVGLVTEGTI-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA
Sbjct: 53 ---------AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
L+L+ K LPV+D +G++ G+IT +V RA L+I E G
Sbjct: 98 TYLMLKNKIGILPVID-NGQVYGVITDRDVFRAFLEISGYGEEG 140
>gi|422882791|ref|ZP_16929247.1| CBS domain protein [Streptococcus sanguinis SK355]
gi|332358281|gb|EGJ36107.1| CBS domain protein [Streptococcus sanguinis SK355]
Length = 218
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 26/166 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++
Sbjct: 3 VKDFMTRK--VVYISPDTTI-----AHAADMMREQKLHRLPVIEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+I+ + + +T + E+ LL+KT VGD+M V + + +LEDA
Sbjct: 50 -GTIAEASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
L+L+ K LPVVD + +L G+IT ++ +A L++ E G +
Sbjct: 98 TYLMLKNKIGILPVVDNE-QLYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|240102816|ref|YP_002959125.1| inosine 5'-monophosphate dehydrogenase [Thermococcus gammatolerans
EJ3]
gi|239910370|gb|ACS33261.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
(IMPD) (guaB) [Thermococcus gammatolerans EJ3]
Length = 485
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 42/145 (28%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKR-ITGFPVIDDDWKLVGLVSDYDLLALDSISGS 151
E++ + P TVD A L+E+ I G PV++D K+VG++S D+
Sbjct: 101 EDVISISPDETVDYAI------FLMERNDIDGLPVVED-GKVVGVISKKDI--------- 144
Query: 152 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
+ GK+V D+MT P+ V E E+A L+ E
Sbjct: 145 -------------------------AVKQGKLVRDIMTGEPITVPENVTAEEALTLMFEH 179
Query: 212 KYRRLPVVDADGKLVGIITRGNVVR 236
+ RLPVV+++GKLVGIIT ++ +
Sbjct: 180 RIDRLPVVNSEGKLVGIITMSDLAK 204
>gi|374299965|ref|YP_005051604.1| hypothetical protein [Desulfovibrio africanus str. Walvis Bay]
gi|332552901|gb|EGJ49945.1| CBS domain containing membrane protein [Desulfovibrio africanus
str. Walvis Bay]
Length = 223
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 28/168 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTV--DEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
+ D+M T P T+ DE+ + A ++L +K I PV+DD KL+G++SD D+
Sbjct: 3 IKDWMNT--------PVITIGPDESMM-KASKLLKDKNIRRLPVVDDTGKLIGILSDRDI 53
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
A S +D +E+ LLS+ V D+MT PV ++ ++E
Sbjct: 54 ---------KEASPSKATTLD-----VHELYYLLSEIK---VKDIMTKNPVRLKAEDSVE 96
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
AA LL E LP+VD + +VGIIT ++ ++I + G Q
Sbjct: 97 KAAVLLSEKSLGGLPIVDDNDSVVGIITEKDMFDILIEITRVRDGGVQ 144
>gi|160286268|pdb|2YZQ|A Chain A, Crystal Structure Of Uncharacterized Conserved Protein
From Pyrococcus Horikoshii
Length = 282
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 33/125 (26%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
ALE+ + ++ FPV++ + KLVG++S
Sbjct: 23 ALELFKKYKVRSFPVVNKEGKLVGIIS--------------------------------- 49
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
V+++L + + + L+ VV+E L+ AA+L+LE YRR+ VVD+ GK VGI+T
Sbjct: 50 VKRILVNPDEEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTV 109
Query: 232 GNVVR 236
G+++R
Sbjct: 110 GDIIR 114
>gi|222056023|ref|YP_002538385.1| hypothetical protein Geob_2941 [Geobacter daltonii FRC-32]
gi|221565312|gb|ACM21284.1| CBS domain containing membrane protein [Geobacter daltonii FRC-32]
Length = 151
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 72/133 (54%), Gaps = 15/133 (11%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST--WKTFNE 171
E+ + R++ FPV++++ LVG+V++ DL+ D + P V S W + E
Sbjct: 27 ELFTKHRVSSFPVVNENNHLVGIVTETDLIEQDK--------SLHIPTVISIFDWVLYLE 78
Query: 172 ----VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 227
+K L K G+ VGD+ + V +T L + A ++ + + LPVV+ KLVG
Sbjct: 79 SDKKFEKELKKMTGQTVGDIFSEDVTSVNTSTPLNEVADIMSKRQIHALPVVEGQ-KLVG 137
Query: 228 IITRGNVVRAALQ 240
+++R +++R+ ++
Sbjct: 138 VVSRIDLIRSMIE 150
>gi|158521214|ref|YP_001529084.1| CBS domain-containing protein [Desulfococcus oleovorans Hxd3]
gi|158510040|gb|ABW67007.1| CBS domain containing membrane protein [Desulfococcus oleovorans
Hxd3]
Length = 152
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 14/152 (9%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MT +E+ V P T + +A +L+E I G PV++ D +LVG++ DL+
Sbjct: 6 DIMT--KEVITVSPETDIAQA-----TRLLLENHINGAPVVNADGELVGMLCQSDLI--- 55
Query: 147 SISGSGRADNSMFPEVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ S+F +D ++ + ++K + K V D M+ PV V +ED
Sbjct: 56 -VQQKKIPLPSIFTFLDGVFSFSSTKSLEKEMQKIAATTVADAMSTDPVSVTPDATVEDV 114
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
A L+ E + +PVV+ + K+VG++ + +V++
Sbjct: 115 ASLMAEKHFHTIPVVE-NSKVVGVLGKEDVLK 145
>gi|365859659|ref|ZP_09399513.1| CBS domain protein [Acetobacteraceae bacterium AT-5844]
gi|363711852|gb|EHL95559.1| CBS domain protein [Acetobacteraceae bacterium AT-5844]
Length = 228
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MT ++ V P T V P + ++ I+G PV++ D L+GLV++ DL+
Sbjct: 3 VRDIMT--RDVMTVSPDTPV-----PALATLFADRGISGVPVVEADGSLIGLVTEGDLMR 55
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
++ A S + + ++ +G+ D+M+ VV E + A
Sbjct: 56 --RLAAEDEAPKSWLSRL---FGAAPRQAHDYAQIHGQRARDVMSTKLEVVSEEDTVAHA 110
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
A LL + + RRLPVV DG+L G+++R +++RA L
Sbjct: 111 AALLEKRRIRRLPVV-KDGRLAGVLSRADLMRAVL 144
>gi|337748935|ref|YP_004643097.1| hypothetical protein KNP414_04697 [Paenibacillus mucilaginosus
KNP414]
gi|336300124|gb|AEI43227.1| CBS domain-containing protein [Paenibacillus mucilaginosus KNP414]
Length = 152
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 77/138 (55%), Gaps = 15/138 (10%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V + + + +E RI+G PV++ K+VG +SD D++ GR ++ + V S + T
Sbjct: 21 VRSVIRMFLEHRISGVPVVNGRKKIVGYISDGDIMEY-----IGRHEDRV---VGSLFFT 72
Query: 169 F----NE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 222
F +E + +S+ V D+ T + V+ +E+ A +L + + ++LP V+
Sbjct: 73 FVFRGDEFGFDERISRILDLPVMDIATKKVITVQAEEPMENIAAILAQRQIKKLP-VEQH 131
Query: 223 GKLVGIITRGNVVRAALQ 240
G+LVGII+RG+V+R + +
Sbjct: 132 GELVGIISRGDVIRHSFK 149
>gi|18976657|ref|NP_578014.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus furiosus DSM
3638]
gi|397650783|ref|YP_006491364.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
gi|1170554|sp|P42851.1|IMDH_PYRFU RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH
gi|595287|gb|AAC44532.1| IMP dehydrogenase [Pyrococcus furiosus]
gi|18892229|gb|AAL80409.1| inosine-5'-monophosphate dehydrogenase (imp dehydrogenase)
[Pyrococcus furiosus DSM 3638]
gi|393188374|gb|AFN03072.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
Length = 485
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 42/144 (29%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKR-ITGFPVIDDDWKLVGLVSDYDLLALDSISGS 151
E++ + P T+D A L+EK I G PV+++D ++VG+++ D+ A +
Sbjct: 101 EDVITIAPDETIDYAL------FLMEKHGIDGLPVVEED-RVVGIITKKDIAARE----- 148
Query: 152 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
G+ V +LMT + V E+ ++E+A ++++E
Sbjct: 149 -----------------------------GRTVKELMTREVITVPESVDVEEALKIMMEN 179
Query: 212 KYRRLPVVDADGKLVGIITRGNVV 235
+ RLPVV+ DGKLVG+IT ++V
Sbjct: 180 RIDRLPVVNEDGKLVGLITMSDLV 203
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVID 128
G +T A G TV + MT + V+ +VD V AL+I++E RI PV++
Sbjct: 137 GIITKKDIAAREG-RTVKELMTRE----VITVPESVD---VEEALKIMMENRIDRLPVVN 188
Query: 129 DDWKLVGLVSDYDLLA 144
+D KLVGL++ DL+A
Sbjct: 189 EDGKLVGLITMSDLVA 204
>gi|329938565|ref|ZP_08287990.1| hypothetical protein SGM_3482 [Streptomyces griseoaurantiacus M045]
gi|329302538|gb|EGG46429.1| hypothetical protein SGM_3482 [Streptomyces griseoaurantiacus M045]
Length = 219
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 69/128 (53%), Gaps = 15/128 (11%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
++ E +++ PV++ + ++VG+VS+ DLL + DS ++++
Sbjct: 30 LMQEWKVSALPVLEGEGRVVGVVSEADLLLKEEFR-------------DSDPDRLTQLRR 76
Query: 175 L--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
L L+K D+MT V V L +AAR++ + +RLPVV+A+G L G+++R
Sbjct: 77 LPDLAKAGALTAADVMTAPAVTVHPGATLGEAARIMARRRVKRLPVVNAEGILEGVVSRA 136
Query: 233 NVVRAALQ 240
++++ L+
Sbjct: 137 DLLKVFLR 144
>gi|187777213|ref|ZP_02993686.1| hypothetical protein CLOSPO_00759 [Clostridium sporogenes ATCC
15579]
gi|187774141|gb|EDU37943.1| CBS domain protein [Clostridium sporogenes ATCC 15579]
Length = 144
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 32/138 (23%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V A ++ E + P+ +++ K+VG+++D D+ AL S++ +DN++
Sbjct: 26 VEKAARLMSEHNVGSIPICENN-KVVGVITDRDI-ALRSVANG--SDNNI---------- 71
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
VGD+MT PVV + ++ DAAR++ E + RRLPV D + +VGI
Sbjct: 72 --------------KVGDIMTSNPVVANKDMDIHDAARIMSERQIRRLPVED-NKNIVGI 116
Query: 229 ITRGNVVRAALQIKHATE 246
++ G++ A++ +H E
Sbjct: 117 VSLGDI---AIEPQHENE 131
>gi|325971923|ref|YP_004248114.1| hypothetical protein [Sphaerochaeta globus str. Buddy]
gi|324027161|gb|ADY13920.1| CBS domain containing membrane protein [Sphaerochaeta globus str.
Buddy]
Length = 214
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T + + A ++ ++++ PV+D + KLVG++++ D+L S +
Sbjct: 11 PVTATPDMSIAEASALMKQEKVHRLPVLDKEKKLVGIITEKDILYATPSPASSLS----- 65
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
+E+ LLSK V LM+ V + + T +E+AAR++++ LPV+
Sbjct: 66 ---------IHEMAYLLSKLT---VKKLMSKNVVTINKDTTVEEAARMMVDQDLSSLPVL 113
Query: 220 DADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+ D KL+GI+T+ ++ + L++ A G +
Sbjct: 114 EGD-KLIGIVTKSDMFKILLELFGARHFGVR 143
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 188 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
MT PV ++ +A+ L+ + K RLPV+D + KLVGIIT +++ A
Sbjct: 7 MTRNPVTATPDMSIAEASALMKQEKVHRLPVLDKEKKLVGIITEKDILYA 56
>gi|148655070|ref|YP_001275275.1| hypothetical protein RoseRS_0916 [Roseiflexus sp. RS-1]
gi|148567180|gb|ABQ89325.1| CBS domain containing protein [Roseiflexus sp. RS-1]
Length = 225
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 28/161 (17%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+M+T V+ PT T+ EA ++ ++RI P++++ KL G+++ DL
Sbjct: 6 VADWMSTPAI--VIAPTATLAEA-----QRLMEQRRIRRLPIVENG-KLAGIITRGDL-- 55
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
S P VD+T ++ E + LL + V + MT + + + DA
Sbjct: 56 -----------RSAQP-VDTTL-SYYEWRALLDRVT---VAECMTRHVITITPDASTLDA 99
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
ARL+L+ K LPVVD +G++VGIIT ++ R LQI AT
Sbjct: 100 ARLMLKHKIGGLPVVDDEGRVVGIITESDLFR--LQIALAT 138
>gi|422884639|ref|ZP_16931087.1| CBS domain protein [Streptococcus sanguinis SK49]
gi|332359069|gb|EGJ36890.1| CBS domain protein [Streptococcus sanguinis SK49]
Length = 218
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 26/166 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++
Sbjct: 3 VKDFMTRK--VVYISPNTTI-----AHAADMMREQKLHRLPVIEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+I+ + + +T + E+ LL+KT VGD+M V + + +LEDA
Sbjct: 50 -GTIAEASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
L+L+ K LPVVD + ++ G+IT ++ +A L++ E G +
Sbjct: 98 TYLMLKNKIGILPVVDNE-QIYGVITDRDIFKAFLEVSGYGEEGVR 142
>gi|451946413|ref|YP_007467008.1| CBS-domain-containing membrane protein [Desulfocapsa sulfexigens
DSM 10523]
gi|451905761|gb|AGF77355.1| CBS-domain-containing membrane protein [Desulfocapsa sulfexigens
DSM 10523]
Length = 203
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 66/120 (55%), Gaps = 9/120 (7%)
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
I+G PV+D++ ++VG++S+ D L G + S + ++ + V +
Sbjct: 91 ISGVPVLDNEERVVGVLSEQDFL-----KDLGTNNRSFMSIITNSLQGKGCVA---VSSP 142
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG-KLVGIITRGNVVRAAL 239
++ D+M+ P +RE T L + ++ + RLPV+D G K+VGI++RG++VR+ L
Sbjct: 143 ERVAADIMSHPPFTIRENTPLGEITVIMSKNNINRLPVLDQQGEKIVGILSRGDIVRSQL 202
>gi|365880294|ref|ZP_09419670.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365291660|emb|CCD92201.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 141
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 20/114 (17%)
Query: 124 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 183
+PV+++D +++G+V+ +D+L + + N M P L+++T
Sbjct: 41 YPVVEND-EVIGIVTKFDVLKCFAFTP-----NQMLPRY----------SDLMNRT---- 80
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
V D+MT + VR T L +L++E + R LPV D D +LVGII R ++VRA
Sbjct: 81 VADVMTSEFIYVRPDTKLTRVLQLMVEHRIRSLPVTDGDNRLVGIIAREDIVRA 134
>gi|320333947|ref|YP_004170658.1| hypothetical protein [Deinococcus maricopensis DSM 21211]
gi|319755236|gb|ADV66993.1| CBS domain containing protein [Deinococcus maricopensis DSM 21211]
Length = 207
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MTT+ P T E V AL IL E+ PV+D KL G+V+ DL
Sbjct: 3 VRDWMTTR-------PMTVTPETPVLDALRILKERGFRRLPVMDGS-KLAGIVTRKDL-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
P +T + E+ +LSK VG++M+ V E +EDA
Sbjct: 53 -----------KDAMPSKATTLSVW-ELNYMLSKLT---VGEMMSRPVVTADEGEYMEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
A + E LPV+D G++ GIIT +V+RA + I E G +
Sbjct: 98 ALRMQEHNVGGLPVLDTTGRMTGIITITDVLRAFIDIMGLREGGTR 143
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
+V D MT P+ V T + DA R+L E +RRLPV+D KL GI+TR ++
Sbjct: 2 LVRDWMTTRPMTVTPETPVLDALRILKERGFRRLPVMDGS-KLAGIVTRKDL 52
>gi|239906344|ref|YP_002953085.1| hypothetical protein DMR_17080 [Desulfovibrio magneticus RS-1]
gi|239796210|dbj|BAH75199.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 412
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 78/144 (54%), Gaps = 14/144 (9%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V P T + E +++LV + + PV+D K++G+V+ DLL +S A S
Sbjct: 123 VGPDTDLGEV-----VDLLVARHVKAVPVVDAGRKVLGVVTGGDLLTRGGLS----ARLS 173
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+F + + + + +G V ++MT + E T+L +A+ +++ +RLP
Sbjct: 174 LFGLLPADAREEAA-----AALSGHTVKEVMTAPAETIGERTSLREASERMVKKGLKRLP 228
Query: 218 VVDADGKLVGIITRGNVVRAALQI 241
VVD G+L+GI++R +++RAA ++
Sbjct: 229 VVDEAGELIGIVSRTDILRAAAKV 252
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
+T G ++ L PT DE+ + A LV + V+D K+ G+V D DL
Sbjct: 263 FTAGLMQQARDVLITDVPTARPDESLLDVASR-LVASPLRRVVVLDAAGKVAGIVHDGDL 321
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
LA S ++F + D V G+ M V E L
Sbjct: 322 LARCGPSKRPGILQALFGKKDDEAAGVCPVGT---------AGEAMQTTVYSVAEDAALT 372
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
D + ++ +RL V D DGKL G++ R V+RA
Sbjct: 373 DVLQKMIVHGVKRLVVTDDDGKLRGMVDREAVLRA 407
>gi|352094424|ref|ZP_08955595.1| putative signal transduction protein with CBS domains
[Synechococcus sp. WH 8016]
gi|351680764|gb|EHA63896.1| putative signal transduction protein with CBS domains
[Synechococcus sp. WH 8016]
Length = 156
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 102 TTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG----RADNS 157
T E + A+ +L + I+G PV+D L+G +++ DL+ +S +G D+
Sbjct: 17 TVTPETALKDAVSLLSDHHISGLPVVDQSGVLIGELTEQDLMVRESGVDAGPYVMLLDSV 76
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVG-DLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
++ + W +V ++L T ++G DL + A E+ L AA LL E +RL
Sbjct: 77 IYLKNPLNWD--KQVHQVLGTTVSDLMGRDLHSCA-----ESLPLPKAASLLHERSTQRL 129
Query: 217 PVVDADGKLVGIITRGNVVRA 237
VVD + + VG++TRG++VRA
Sbjct: 130 IVVDDNKRPVGVLTRGDIVRA 150
>gi|453051719|gb|EME99218.1| putative CBS domain-containing protein [Streptomyces mobaraensis
NBRC 13819 = DSM 40847]
Length = 216
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 67/121 (55%), Gaps = 11/121 (9%)
Query: 120 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 179
+++ PV+ + +++G+VS+ DLL + G R ++ VD + + +K
Sbjct: 36 KVSALPVLAGEGRVIGVVSEADLLVKEEYKG--REPSA----VDRPERLGDP-----AKA 84
Query: 180 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
G+ DLM+ + V + +AAR + +RLPVVDA+GKLVG+++R ++++ L
Sbjct: 85 AGRTAQDLMSAPAITVHADAPVAEAARAMALRGVKRLPVVDAEGKLVGVVSRADILKVYL 144
Query: 240 Q 240
+
Sbjct: 145 R 145
>gi|322391656|ref|ZP_08065124.1| CBS domain protein [Streptococcus peroris ATCC 700780]
gi|321145467|gb|EFX40860.1| CBS domain protein [Streptococcus peroris ATCC 700780]
Length = 218
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P T V A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTNV-----AHAADLMREQGLHRLPVIEND-KLVGLVTEGTI-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA
Sbjct: 53 ---------AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
L+L+ K LPVVD +G+L G+IT +V RA L+I E G
Sbjct: 98 TYLMLKNKIGILPVVD-NGQLYGVITDRDVFRAFLEIAGYGEEG 140
>gi|313676463|ref|YP_004054459.1| inosine-5'-monophosphate dehydrogenase [Marivirga tractuosa DSM
4126]
gi|312943161|gb|ADR22351.1| inosine-5'-monophosphate dehydrogenase [Marivirga tractuosa DSM
4126]
Length = 490
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 31/140 (22%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
++ P T E+ V AL+I+ E +I G PV+D + KLVG+V++ DL G+
Sbjct: 98 ILDPITLHIESTVGDALKIMRENKIGGIPVVDSNKKLVGIVTNRDL----RFQKDGKV-- 151
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
V+K++ T+GK+ + E NLE A +L E K +L
Sbjct: 152 --------------SVEKVM--TSGKL---------ITAEEGINLEGAEGVLQEHKIEKL 186
Query: 217 PVVDADGKLVGIITRGNVVR 236
P+++ G L+G+IT ++++
Sbjct: 187 PIINKSGILMGLITYKDILK 206
>gi|376296935|ref|YP_005168165.1| hypothetical protein DND132_2157 [Desulfovibrio desulfuricans
ND132]
gi|323459497|gb|EGB15362.1| CBS domain containing protein [Desulfovibrio desulfuricans ND132]
Length = 225
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A EIL EK I FPVID LVG+VSD D+ A S F D+ ++
Sbjct: 23 AAEILREKNIRQFPVIDSAGSLVGIVSDRDIR---------DAMPSKFIPGDAVVESGGG 73
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+ L + GD+MT P+ V + + A LL++ K LPVVD G+L GIIT+
Sbjct: 74 LYTLTA-------GDIMTLDPISVPSDAAMTEVADLLVKHKVGGLPVVDG-GRLEGIITQ 125
Query: 232 GNVVRAALQIKHATEMGAQ 250
+V+R + GAQ
Sbjct: 126 LDVLRFLCASAGSARGGAQ 144
>gi|290955592|ref|YP_003486774.1| hypothetical protein SCAB_10291 [Streptomyces scabiei 87.22]
gi|260645118|emb|CBG68204.1| putative CBS domain protein [Streptomyces scabiei 87.22]
Length = 226
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 175
+ +++++ PV++ D ++VG+VS+ DLL + F + D T
Sbjct: 34 MTDRQVSAVPVVEGDGRVVGVVSEADLLPKEE-----------FRDRDLTRAEQLRRMSD 82
Query: 176 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
L+K ++M+ +V L AAR++ + +RLPV+D +G+L+G+++RG+++
Sbjct: 83 LAKAGAVTAEEVMSAPAIVAHPDVTLAQAARIMAVNRVKRLPVIDDEGRLLGVVSRGDLL 142
Query: 236 RAALQ 240
+ L+
Sbjct: 143 KVFLR 147
>gi|148264366|ref|YP_001231072.1| hypothetical protein Gura_2320 [Geobacter uraniireducens Rf4]
gi|146397866|gb|ABQ26499.1| CBS domain containing protein [Geobacter uraniireducens Rf4]
Length = 150
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 24/164 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
T D MT +++ VK TTV E E+ R++ FPV+DD+ +L+G+V++ DL+
Sbjct: 3 TAADVMT--KDVITVKTGTTVREL-----AELFTANRMSSFPVVDDNGELIGIVTETDLI 55
Query: 144 ALDSISGSGRADNSM-FPEVDS--TWKTFNEVQKLLSKT----NGKMVGDLMTPAPVVVR 196
D S+ P V S W + E +K K G+ VGD+ T V+
Sbjct: 56 ---------EQDKSLHIPTVISLFDWVIYLESEKKFEKELKKMTGQTVGDIYTEDVESVK 106
Query: 197 ETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
T+ L + A ++ K +PVVD D KLVG+I+R +++R +
Sbjct: 107 STSLLSEVADIMSSKKIHAVPVVD-DKKLVGVISRIDLIRTMIN 149
>gi|386334890|ref|YP_006031061.1| Transporter [Ralstonia solanacearum Po82]
gi|334197340|gb|AEG70525.1| Transporter [Ralstonia solanacearum Po82]
Length = 437
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 16/129 (12%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
VP AL +L + PV+DD +L+G+V+ DL + + R + W
Sbjct: 313 VPHALRLLQRHGVKSLPVLDDGRRLIGIVTRADLTGTAARAPRQRLRD---------WFA 363
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ V D+MTP + +R + D L + +PVVDA G+L GI
Sbjct: 364 IGAMTP-------PRVSDVMTPRVLAIRADAPMADLVPLFASAGHHHIPVVDAHGRLAGI 416
Query: 229 ITRGNVVRA 237
+T+ +++ A
Sbjct: 417 LTQADIIHA 425
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 173 QKLLSKT-NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
Q+ ++T + D+MTP+ V V T++ A RLL + LPV+D +L+GI+TR
Sbjct: 284 QQAYARTFHALTCADIMTPSVVTVSAATSVPHALRLLQRHGVKSLPVLDDGRRLIGIVTR 343
Query: 232 GNV 234
++
Sbjct: 344 ADL 346
>gi|253699582|ref|YP_003020771.1| hypothetical protein GM21_0947 [Geobacter sp. M21]
gi|251774432|gb|ACT17013.1| CBS domain containing protein [Geobacter sp. M21]
Length = 216
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 18/151 (11%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T + V AL ++ +K+I PV++ + KLVG+VSD DL + A
Sbjct: 11 PITITPDISVTEALRLMGDKKIRRLPVVERNGKLVGIVSDRDLFQASPSPATSLA----- 65
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
W E+ LL+K V M + V E T LE+AAR++++ + LPV+
Sbjct: 66 -----IW----EIHDLLAKLT---VDKTMAKDVITVTEDTPLEEAARVMVDRRIGGLPVM 113
Query: 220 DADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
D LVGIIT ++ +A L++ G +
Sbjct: 114 KGDA-LVGIITESDLFQALLELLGGRRQGVR 143
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 39/56 (69%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+V D MTP P+ + ++ +A RL+ + K RRLPVV+ +GKLVGI++ ++ +A+
Sbjct: 2 LVRDRMTPNPITITPDISVTEALRLMGDKKIRRLPVVERNGKLVGIVSDRDLFQAS 57
>gi|119715234|ref|YP_922199.1| hypothetical protein Noca_0991 [Nocardioides sp. JS614]
gi|119535895|gb|ABL80512.1| CBS domain containing protein [Nocardioides sp. JS614]
Length = 196
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 75/158 (47%), Gaps = 34/158 (21%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MT E V+P+TTV AL L E IT PV+D +L G+VS+ DL+
Sbjct: 3 VQDLMTP--EPMTVRPSTTVK-----AALSRLAEFGITCLPVVDGAGRLQGVVSEADLIR 55
Query: 145 LDSISGSGRADN------SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 198
D ++ RA +FP +T EV T PV VR
Sbjct: 56 -DVVAPDPRAQERPVTIEPVFPP-----RTVEEV---------------YTRHPVSVRRN 94
Query: 199 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+L A ++ T + LPVVD +G+LVG+++R +VV+
Sbjct: 95 DDLARAVDVMTSTAVKSLPVVDDEGRLVGVVSRSDVVQ 132
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V DLMTP P+ VR +T ++ A L E LPVVD G+L G+++ +++R
Sbjct: 2 LVQDLMTPEPMTVRPSTTVKAALSRLAEFGITCLPVVDGAGRLQGVVSEADLIR 55
>gi|406672855|ref|ZP_11080080.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum CCUG
30536]
gi|423315693|ref|ZP_17293598.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum ATCC
43767]
gi|405585797|gb|EKB59600.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum ATCC
43767]
gi|405587399|gb|EKB61127.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum CCUG
30536]
Length = 486
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 31/131 (23%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T + A E + +I+G PV+D++ L+G++++ D+ + +S
Sbjct: 100 PVTLSKNHTLGEAKETMARYKISGLPVVDEENNLIGIITNRDVKYQEDLS---------- 149
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
+V+ L++K N L+T + TNLE+A ++LLE + +LP+V
Sbjct: 150 ----------VKVEHLMTKEN------LITS-----HKDTNLEEAKKILLENRVEKLPIV 188
Query: 220 DADGKLVGIIT 230
D KLVG+IT
Sbjct: 189 DEKNKLVGLIT 199
>gi|357024559|ref|ZP_09086708.1| signal-transduction protein [Mesorhizobium amorphae CCNWGS0123]
gi|355543521|gb|EHH12648.1| signal-transduction protein [Mesorhizobium amorphae CCNWGS0123]
Length = 214
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 17/154 (11%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 148
M K+ + V T + D V A I+++ RI+G PV+D+D +LVG+VS+ D L +
Sbjct: 1 MKAKDVMTVNVVTVSPDHG-VRHAARIMLDHRISGLPVVDNDGRLVGVVSEGDFLRRSEL 59
Query: 149 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 208
++ P NE + + + K V DLMT +V E T + A L+
Sbjct: 60 GVP-----ALLP---------NEARSYVKGHSWK-VSDLMTSDVIVADEDTTIARIAALM 104
Query: 209 LETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
E +R+PV+ +LVG+++R +++R + K
Sbjct: 105 QEHGIKRIPVLRRQ-RLVGVVSRADLLRVFVAAK 137
>gi|407715794|ref|YP_006837074.1| signal transduction protein with CBS domains [Cycloclasticus sp.
P1]
gi|407256130|gb|AFT66571.1| signal transduction protein with CBS domains [Cycloclasticus sp.
P1]
Length = 133
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 24/129 (18%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
+ A++ L +I+G PV+D+ LVG++S+ D L + A S + E W
Sbjct: 24 ISQAIKYLNTHKISGAPVVDERGTLVGMLSEKDCLQV--------ALQSTYYE---DWV- 71
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
G +V + MT V +T ++ D A L++ ++R PV+D DG+LVG
Sbjct: 72 ------------GGVVSEYMTEELETVPDTASIVDVAEKFLKSSFKRYPVLDEDGELVGQ 119
Query: 229 ITRGNVVRA 237
I+R +V+RA
Sbjct: 120 ISRSDVLRA 128
>gi|319951912|ref|YP_004163179.1| inosine-5'-monophosphate dehydrogenase [Cellulophaga algicola DSM
14237]
gi|319420572|gb|ADV47681.1| inosine-5'-monophosphate dehydrogenase [Cellulophaga algicola DSM
14237]
Length = 490
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 33/135 (24%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
++ P T +FV A + E I G P++D D KL+G+V++ DL
Sbjct: 98 IIDPVTLPLNSFVRDAKANMKEFGIGGIPIVDGDGKLIGIVTNRDLR------------- 144
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRR 215
K N + + ++MT +V V E T+LE A +L E K +
Sbjct: 145 -------------------FEKNNDRPISEVMTTKNLVTVAEGTSLEQAEDILQENKIEK 185
Query: 216 LPVVDADGKLVGIIT 230
LPVVD + KLVG+IT
Sbjct: 186 LPVVDKNYKLVGLIT 200
>gi|452753359|ref|ZP_21953091.1| hypothetical protein C725_2877 [alpha proteobacterium JLT2015]
gi|451959350|gb|EMD81774.1| hypothetical protein C725_2877 [alpha proteobacterium JLT2015]
Length = 121
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 27/129 (20%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 175
+VE PV+DD+ LVG+++D D+ G M E
Sbjct: 1 MVENDCGQIPVVDDEGGLVGVITDRDVCCRAIAEG-------MSAET------------- 40
Query: 176 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
VGD+MT + V V T+LED + + + RR+PV+D DGK G++++ +V
Sbjct: 41 -------RVGDVMTRSVVSVTPDTSLEDCLASMEKNQVRRVPVIDDDGKCCGMVSQADVA 93
Query: 236 RAALQIKHA 244
R K A
Sbjct: 94 RTGSDAKTA 102
>gi|294140416|ref|YP_003556394.1| hypothetical protein SVI_1645 [Shewanella violacea DSS12]
gi|293326885|dbj|BAJ01616.1| CBS domain protein [Shewanella violacea DSS12]
Length = 195
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 32/153 (20%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
+ D+M P T + A+E+ ++ + G PVID++ K++G +S+ D L
Sbjct: 58 IADYMNRH-------PVTFTAHMPIAEAVELFLQNQQIGGPVIDENRKVIGFLSEQDCL- 109
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+++T+ NE N VGD+M P+ V++ +++ D
Sbjct: 110 --------------IKMLEATY--LNE--------NHCDVGDVMHGDPLTVKKESSVLDL 145
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
A+ + K + P+VD + KL+G+I R V++A
Sbjct: 146 AQQMTHHKPKIYPIVDEEEKLIGVINRSAVLKA 178
>gi|254381603|ref|ZP_04996967.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194340512|gb|EDX21478.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 213
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 20/132 (15%)
Query: 105 DEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 164
D AF A ++L + ++G PV+DD+ ++VG+VS D+LA
Sbjct: 11 DTAFKDVA-KLLAQYGVSGLPVLDDEDRVVGVVSQTDVLA-------------------H 50
Query: 165 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 224
+ ++ T GD+M+ V V DAARL+ RLPVVD + +
Sbjct: 51 AAPAPHPAEETARPTGSPTAGDVMSTPAVTVHAEETAADAARLMTRRGIERLPVVDEEDR 110
Query: 225 LVGIITRGNVVR 236
LVGI+TR +++R
Sbjct: 111 LVGIVTRRDLLR 122
>gi|14591537|ref|NP_143619.1| hypothetical protein PH1780 [Pyrococcus horikoshii OT3]
gi|3258215|dbj|BAA30898.1| 285aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 285
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 33/125 (26%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
ALE+ + ++ FPV++ + KLVG++S
Sbjct: 26 ALELFKKYKVRSFPVVNKEGKLVGIIS--------------------------------- 52
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
V+++L + + + L+ VV+E L+ AA+L+LE YRR+ VVD+ GK VGI+T
Sbjct: 53 VKRILVNPDEEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTV 112
Query: 232 GNVVR 236
G+++R
Sbjct: 113 GDIIR 117
>gi|226359465|ref|YP_002777242.1| hypothetical protein ROP_00500 [Rhodococcus opacus B4]
gi|226237949|dbj|BAH48297.1| hypothetical protein [Rhodococcus opacus B4]
Length = 185
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 31/140 (22%)
Query: 111 TALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 170
TA +L E PV+DD +LVG+++ D+L RA +
Sbjct: 22 TAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVL---------RAGTA------------- 59
Query: 171 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+ + VG++MT V + D +++LL R LPVVD DG++VGI++
Sbjct: 60 ---------SSETVGEVMTAPAVAAPMYQYVADVSKMLLHQGLRSLPVVDIDGRVVGILS 110
Query: 231 RGNVVRAALQIKHATEMGAQ 250
R +VVR L+ +GAQ
Sbjct: 111 RSDVVRLMLKPDETIAVGAQ 130
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 194 VVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
VVR++ ++ AA LL E + +PVVD +LVG++ G+V+RA
Sbjct: 13 VVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVLRAG 57
>gi|359400359|ref|ZP_09193343.1| hypothetical protein NSU_3029 [Novosphingobium pentaromativorans
US6-1]
gi|357598219|gb|EHJ59953.1| hypothetical protein NSU_3029 [Novosphingobium pentaromativorans
US6-1]
Length = 237
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
E VP +L+E+ I+ PVI D +L G+VS+ DLL R ++ P
Sbjct: 18 ETSVPEVARLLLERHISAVPVIGSDGQLAGIVSEGDLLR--------RTEDGSHPHGSWW 69
Query: 166 WKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 222
+ F++ + K G+ D+MT V V E + A LL + +R+PV+ D
Sbjct: 70 LRHFSKRGASAADYVKARGRFAADVMTRDVVTVTEEALSSEVAHLLESRRIKRVPVLRED 129
Query: 223 GKLVGIITRGNVVRA 237
K+VGI++R +++R
Sbjct: 130 -KVVGIVSRADLIRG 143
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR---------A 237
+MT + V V T++ + ARLLLE +PV+ +DG+L GI++ G+++R
Sbjct: 7 IMTTSVVSVTPETSVPEVARLLLERHISAVPVIGSDGQLAGIVSEGDLLRRTEDGSHPHG 66
Query: 238 ALQIKHATEMGA 249
+ ++H ++ GA
Sbjct: 67 SWWLRHFSKRGA 78
>gi|334563325|ref|ZP_08516316.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium bovis DSM
20582]
Length = 493
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 33/135 (24%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
V P T + + E+ RI+G PV+D D LVG+ ++ D+ S
Sbjct: 91 VSDPVTCTPDMTIREVDELCARYRISGLPVVDGDGVLVGICTNRDMRFEQDFS------- 143
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRR 215
+ V D+MTP P+VV +E + + A RLL E K +
Sbjct: 144 -------------------------RQVRDVMTPMPLVVAQEGVSADAALRLLSENKVEK 178
Query: 216 LPVVDADGKLVGIIT 230
LP+VD G+L G+IT
Sbjct: 179 LPIVDGGGRLTGLIT 193
>gi|70606966|ref|YP_255836.1| hypothetical protein Saci_1196 [Sulfolobus acidocaldarius DSM 639]
gi|449067198|ref|YP_007434280.1| CBS domain-containing protein [Sulfolobus acidocaldarius N8]
gi|449069469|ref|YP_007436550.1| CBS domain-containing protein [Sulfolobus acidocaldarius Ron12/I]
gi|68567614|gb|AAY80543.1| CBS domain protein [Sulfolobus acidocaldarius DSM 639]
gi|449035706|gb|AGE71132.1| CBS domain-containing protein [Sulfolobus acidocaldarius N8]
gi|449037977|gb|AGE73402.1| CBS domain-containing protein [Sulfolobus acidocaldarius Ron12/I]
Length = 272
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 29/142 (20%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
KP ++ V AL I+V + + PVID + K+ G+V++ +++ +
Sbjct: 83 KPAYVYEDDDVVDALTIMVARNLGSLPVIDVEKKVKGIVTEREMMLI------------- 129
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
F ++D + +SK K V + PVV + A+L+++ +RRLPV
Sbjct: 130 FQDLDHVYP--------VSKFMTKRVTTIYEDMPVV--------EGAKLMVKRGFRRLPV 173
Query: 219 VDADGKLVGIITRGNVVRAALQ 240
VD +GKLVG+IT ++++ L+
Sbjct: 174 VDTEGKLVGVITAADILKNFLK 195
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 162 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 221
VD+ KT N+ Q L + K + +M+P P V E ++ DA +++ LPV+D
Sbjct: 56 VDACEKTCNQAQ--LYELLNKEISKVMSPKPAYVYEDDDVVDALTIMVARNLGSLPVIDV 113
Query: 222 DGKLVGIITRGNVVRAALQIKHA 244
+ K+ GI+T ++ + H
Sbjct: 114 EKKVKGIVTEREMMLIFQDLDHV 136
>gi|295106203|emb|CBL03746.1| CBS-domain-containing membrane protein [Gordonibacter pamelaeae
7-10-1-b]
Length = 161
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 14/131 (10%)
Query: 122 TGFPVIDDDWKLVGLVSDYDLLAL------DSISGSGRADNSMFPEVDSTWKTFNEVQKL 175
+G VID+D +VG +SD D++ SI G G A+ ++ ++F E +
Sbjct: 35 SGLAVIDEDRHVVGFISDGDIMKAVAAQKTRSIFGGGYANMVLYDN-----ESFEEKARA 89
Query: 176 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
L N V +L + V ++ + A +L + K++++PV+D DG+LVG++ R +
Sbjct: 90 LKHRN---VMELAVQKVLCVTADQSIGEIADVLAKKKFKKVPVIDEDGRLVGVVRRATIT 146
Query: 236 RAALQIKHATE 246
R + E
Sbjct: 147 RYLFDVLFGEE 157
>gi|301058318|ref|ZP_07199351.1| CBS domain protein [delta proteobacterium NaphS2]
gi|300447554|gb|EFK11286.1| CBS domain protein [delta proteobacterium NaphS2]
Length = 225
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 18/139 (12%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A++ + EK I+ PVI KLVG+V+D DL RA S D+T +E
Sbjct: 23 AMQRMKEKGISMLPVIKKG-KLVGVVTDRDL---------KRASAS-----DATTLEVHE 67
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+ L++K V D+MT P+ + +E+AA +LLE PV+D GK++GIIT+
Sbjct: 68 LLFLITKIK---VQDIMTRNPITIPFDFTVEEAAEVLLEKNISGAPVMDEKGKVIGIITK 124
Query: 232 GNVVRAALQIKHATEMGAQ 250
++ R + + + G Q
Sbjct: 125 NDLFRVLISLTGVGKRGIQ 143
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 88 FMTTK---EELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL- 143
F+ TK +++ P T + V A E+L+EK I+G PV+D+ K++G+++ DL
Sbjct: 70 FLITKIKVQDIMTRNPITIPFDFTVEEAAEVLLEKNISGAPVMDEKGKVIGIITKNDLFR 129
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 193
L S++G G+ EV+ + E+ ++ + G+MV L T V
Sbjct: 130 VLISLTGVGKRGIQFAFEVEDRPGSIRELADVIRRYGGRMVSILSTYENV 179
>gi|353227418|emb|CCA77926.1| hypothetical protein PIIN_00640 [Piriformospora indica DSM 11827]
Length = 672
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 102 TTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 161
T D V A ++ KR V+D++ L G+ + DL S+ S E
Sbjct: 84 TVPDNMTVADASQLCAAKRTDCVLVVDEEEGLSGIFTAKDLAFRVSLPSSF--------E 135
Query: 162 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 221
T + F +V + +V +MTP P+V R+TT+ +A +L+++ +R LPV +
Sbjct: 136 CQPTDRVFEQVTAMGLDPRTTLVSTIMTPNPMVTRDTTSATEALQLMVQRGFRHLPVCND 195
Query: 222 DGKLVGIITRGNVVRAAL 239
DG +VG++ V AL
Sbjct: 196 DGNVVGLLDITKVFHEAL 213
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
+MTP P V + ++DA + + Y LPVV++DG+LV II + A L+ +A
Sbjct: 347 VMTPHPDVAPPSMTIQDALKKMYNGHYLNLPVVESDGRLVAIIDVLKLTYATLEQMNALA 406
Query: 247 MGAQ 250
+Q
Sbjct: 407 DASQ 410
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 28/165 (16%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDSISGSGRADN 156
P T D AL+++V++ PV +DD +VGL+ + ALD I A
Sbjct: 165 NPMVTRDTTSATEALQLMVQRGFRHLPVCNDDGNVVGLLDITKVFHEALDKIERGSSASQ 224
Query: 157 SMFPEVDSTWKTFNEV-------------QKLLSKTNGKMVGDLMTP--APVVVRETTNL 201
++ ++S + V + L KT + +M P V T +
Sbjct: 225 KLYSALESVQTELDGVASNPQAAAMMAFVESLRDKTALPDLSTVMDSRTQPATVGPRTTV 284
Query: 202 EDAARLLLETKYRRLPVVD-----------ADGKLVGIITRGNVV 235
DAARL+ E + + V++ A K+ GI T ++V
Sbjct: 285 RDAARLMKENRTTAVCVMEGGANTAGQPTGAPAKIAGIFTSKDIV 329
>gi|299132348|ref|ZP_07025543.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
gi|298592485|gb|EFI52685.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
Length = 228
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MT + L V P V EA +++V I+ V+D+ LVGL+S+ DLL
Sbjct: 3 VRDVMT--KHLVSVLPNVHVREAA-----KMMVGNGISALTVVDERGSLVGLLSEGDLLH 55
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS----KTNGKMVGDLMTPAPVVVRETTN 200
++ R S W + L+ K+N +MV D+MT +
Sbjct: 56 RRELNTETRR---------SWWLDLFASDRDLAADYVKSNSRMVRDVMTTKVLTASPDDT 106
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
L D AR + +RLPV++ +G L+GIITR N+V+A K
Sbjct: 107 LGDVARRFEKHHIKRLPVIE-NGHLIGIITRANLVQALANTK 147
>gi|219667093|ref|YP_002457528.1| signal transduction protein with CBS domains [Desulfitobacterium
hafniense DCB-2]
gi|219537353|gb|ACL19092.1| putative signal transduction protein with CBS domains
[Desulfitobacterium hafniense DCB-2]
Length = 149
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D M T + + P T + E ++L + I+G PVID L+G+VS+ DLL
Sbjct: 3 VQDIMQTN--VITISPNTEIREIA-----KLLCDHHISGVPVIDLFGNLIGIVSEGDLLH 55
Query: 145 LDSISGSGRADNSM-FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ R ++ F ++ + + L K ++MT + + + +E+
Sbjct: 56 KET---HPRVPEAVGFLGALIYYRGVKQYESDLKKLVALKASEIMTHEVITLEKDAAIEE 112
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
AA L++ +RLP+++ +GK+VGIITR +V++ ++
Sbjct: 113 AASLMINHNVKRLPIME-NGKMVGIITRKDVIKVLIE 148
>gi|146320503|ref|YP_001200214.1| hypothetical protein SSU98_0656 [Streptococcus suis 98HAH33]
gi|253751473|ref|YP_003024614.1| hypothetical protein SSUSC84_0586 [Streptococcus suis SC84]
gi|253753374|ref|YP_003026515.1| hypothetical protein SSU0613 [Streptococcus suis P1/7]
gi|253755797|ref|YP_003028937.1| hypothetical protein SSUBM407_1211 [Streptococcus suis BM407]
gi|386577642|ref|YP_006074048.1| hypothetical protein [Streptococcus suis GZ1]
gi|386579699|ref|YP_006076104.1| hypothetical protein SSUJS14_0746 [Streptococcus suis JS14]
gi|386581647|ref|YP_006078051.1| hypothetical protein SSU12_0612 [Streptococcus suis SS12]
gi|386587880|ref|YP_006084281.1| hypothetical protein SSUA7_0611 [Streptococcus suis A7]
gi|403061284|ref|YP_006649500.1| hypothetical protein YYK_02915 [Streptococcus suis S735]
gi|145691309|gb|ABP91814.1| hypothetical protein SSU98_0656 [Streptococcus suis 98HAH33]
gi|251815762|emb|CAZ51364.1| conserved hypothetical protein [Streptococcus suis SC84]
gi|251818261|emb|CAZ56069.1| conserved hypothetical protein [Streptococcus suis BM407]
gi|251819620|emb|CAR45355.1| conserved hypothetical protein [Streptococcus suis P1/7]
gi|292558105|gb|ADE31106.1| hypothetical protein SSGZ1_0647 [Streptococcus suis GZ1]
gi|319757891|gb|ADV69833.1| hypothetical protein SSUJS14_0746 [Streptococcus suis JS14]
gi|353733793|gb|AER14803.1| hypothetical protein SSU12_0612 [Streptococcus suis SS12]
gi|354985041|gb|AER43939.1| hypothetical protein SSUA7_0611 [Streptococcus suis A7]
gi|402808610|gb|AFR00102.1| hypothetical protein YYK_02915 [Streptococcus suis S735]
Length = 218
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 26/167 (15%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
+V DFMT K + + P TTV A +I+ E+ + PVI++D KLVGLV++
Sbjct: 2 SVKDFMTRK--VVYISPDTTV-----AHAADIMREQDLHRLPVIEND-KLVGLVTE---- 49
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+I+ + + +T + E+ LL+KT V D+M + V +LED
Sbjct: 50 --GTIAEASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIKNVITVSGYASLED 96
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
AA L+ + K LPVVD +G+L G+IT ++ A L + E G +
Sbjct: 97 AAYLMYKNKVGILPVVD-NGQLYGVITDRDIFAAFLHVSGYGEEGVR 142
>gi|259048099|ref|ZP_05738500.1| acetoin utilization protein AcuB [Granulicatella adiacens ATCC
49175]
gi|259035160|gb|EEW36415.1| acetoin utilization protein AcuB [Granulicatella adiacens ATCC
49175]
Length = 213
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 25/157 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+M+T + V P TTV AL+++ E I PV++D KLVGL+++ +L+A
Sbjct: 3 VKDYMSTN--VITVTPETTV-----MKALDLMKEHDIHRLPVVED-GKLVGLLTE-ELVA 53
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
S S + T + +E+ LL+KT ++M + V+ T LE+A
Sbjct: 54 GHSPSMA-------------TSLSMHELNYLLNKTTA---SEIMQKQVLTVKAHTLLEEA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
A L+ + K LPVVDA G + GIIT ++ A ++I
Sbjct: 98 ASLMRQQKVGVLPVVDARGHVEGIITDKDIFDAFIEI 134
>gi|423074979|ref|ZP_17063698.1| CBS domain protein [Desulfitobacterium hafniense DP7]
gi|361853928|gb|EHL06043.1| CBS domain protein [Desulfitobacterium hafniense DP7]
Length = 160
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 82/157 (52%), Gaps = 12/157 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D M T + + P T + E ++L + I+G PVID L+G+VS+ DLL
Sbjct: 14 VQDIMQTN--VITISPNTEIREI-----AKLLCDHHISGVPVIDLFGNLIGIVSEGDLLH 66
Query: 145 LDSISGSGRADNSM-FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ R ++ F ++ + + L K ++MT + + + ++E+
Sbjct: 67 KET---HPRVPEAVGFLGALIYYRGVKQYESDLKKLVALKASEIMTHEVITLDKDASIEE 123
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
AA L++ +RLP+++ +GK+VGIITR +V++ ++
Sbjct: 124 AASLMINHNVKRLPIME-NGKMVGIITRKDVIKVLIE 159
>gi|260654571|ref|ZP_05860061.1| putative CBS domain protein [Jonquetella anthropi E3_33 E1]
gi|424844536|ref|ZP_18269147.1| CBS-domain-containing membrane protein [Jonquetella anthropi DSM
22815]
gi|260630587|gb|EEX48781.1| putative CBS domain protein [Jonquetella anthropi E3_33 E1]
gi|363985974|gb|EHM12804.1| CBS-domain-containing membrane protein [Jonquetella anthropi DSM
22815]
Length = 154
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 25/164 (15%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYD 141
+ T GD M K +L V T TV +A L +L R++G PV+D W+LVG S+ D
Sbjct: 4 IMTAGDLM--KRDLSAVLETDTVADA-----LRVLHSHRLSGVPVVDAYWRLVGFFSEAD 56
Query: 142 L--LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM----VGDLMTPAPVVV 195
LAL + + + ++ +F E +KLLS ++ V M P+ V
Sbjct: 57 ALELALPTTAQILQQESFLFDE-----------EKLLSAQFARIYSQPVSKYMQRPPLSV 105
Query: 196 RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
+ ++ A+L+L+ K R+ V D D LVG++ + + L
Sbjct: 106 HPSAHILSVAQLMLDKKLYRIAVTDRD-VLVGVLDQSDFCEYLL 148
>gi|373109163|ref|ZP_09523442.1| hypothetical protein HMPREF9712_01035 [Myroides odoratimimus CCUG
10230]
gi|423129169|ref|ZP_17116844.1| hypothetical protein HMPREF9714_00244 [Myroides odoratimimus CCUG
12901]
gi|423132828|ref|ZP_17120475.1| hypothetical protein HMPREF9715_00250 [Myroides odoratimimus CIP
101113]
gi|371645161|gb|EHO10687.1| hypothetical protein HMPREF9712_01035 [Myroides odoratimimus CCUG
10230]
gi|371649367|gb|EHO14847.1| hypothetical protein HMPREF9714_00244 [Myroides odoratimimus CCUG
12901]
gi|371649585|gb|EHO15062.1| hypothetical protein HMPREF9715_00250 [Myroides odoratimimus CIP
101113]
Length = 138
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 19/123 (15%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
++LVE I PVI+ + +VG++S D+L + G+ D S + +K
Sbjct: 29 QLLVEYNIRHIPVIEAE-NVVGIISSNDILKIGY--GANDLDQSALDAIYDAYK------ 79
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
+ D+MT P+VV + TN++D A + + ++ LPVVD D L GI+T +
Sbjct: 80 ----------LEDVMTKNPIVVMDDTNIKDVAEIFSKQQFHSLPVVDKDNVLQGIVTTTD 129
Query: 234 VVR 236
++
Sbjct: 130 MIN 132
>gi|406658694|ref|ZP_11066834.1| DRTGG domain/CBS domain protein [Streptococcus iniae 9117]
gi|405578909|gb|EKB53023.1| DRTGG domain/CBS domain protein [Streptococcus iniae 9117]
Length = 429
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 127 IDDDWKLVGLV----SDYDLLALD-SISGSGR----ADNSMFPEVDSTWKTFNEV--QKL 175
I D K VG V DY L +D SI+ + N FP +D + K V + +
Sbjct: 185 IKTDLKTVGQVLVPVEDYGYLYVDNSINDFNKLIKTTKNVRFPVLDHSQKVVGVVSMRDV 244
Query: 176 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
+ +T +G LMT +P+ +E+T+L + ++ ++ LPVVD D KL+G+ITR
Sbjct: 245 VDQTQNTNLGQLMTKSPITAKESTSLANISQKMIFEDLNMLPVVDEDHKLIGVITR---- 300
Query: 236 RAALQIKHATE 246
R A++ A++
Sbjct: 301 RLAMENMQASQ 311
>gi|408828377|ref|ZP_11213267.1| hypothetical protein SsomD4_14410 [Streptomyces somaliensis DSM
40738]
Length = 218
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 67/157 (42%), Gaps = 31/157 (19%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVG+ MT E+ P T+ +E +L RI G PV+D D K+VG+VS DL
Sbjct: 6 TVGEVMTG--EVVQAHPDTSAEEVS-----RLLSAHRIGGLPVVDGDDKVVGVVSRTDL- 57
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ G LMT V V + D
Sbjct: 58 -----------------------AGRRAARGRAGPGEAATAGHLMTSPAVTVHPEQRVAD 94
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
AAR++ + RLPVVD + +L+GI TR +++R L+
Sbjct: 95 AARVMERRRVDRLPVVDEEDRLIGIATRRDLLRVFLR 131
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 179 TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
T + VG++MT V T+ E+ +RLL + LPVVD D K+VG+++R
Sbjct: 2 TRNRTVGEVMTGEVVQAHPDTSAEEVSRLLSAHRIGGLPVVDGDDKVVGVVSR 54
>gi|408534327|emb|CCK32501.1| CBS domain-containing protein [Streptomyces davawensis JCM 4913]
Length = 223
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Query: 96 HVVKPTTTVDEAFV------PTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 149
HVV T D A V + L +++++ V+D +++G+VS+ DLL +
Sbjct: 6 HVVSDVMTRDVAVVRRDAAFKDVVRTLHDRKVSALVVVDGGRRVLGVVSEADLLPKEEFR 65
Query: 150 GSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 207
DS + ++++L L+K G+LMT + VR T L AAR+
Sbjct: 66 -------------DSDPDRYTQLRRLSDLAKAGSVTAGELMTSPALTVRAETTLAQAARI 112
Query: 208 LLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+ + +RLPVV +L G+++R ++++ L+
Sbjct: 113 MARARVKRLPVVGDTDRLEGVVSRSDLLKVFLR 145
>gi|405382811|ref|ZP_11036588.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
gi|397320739|gb|EJJ25170.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
Length = 160
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 148
MTT +L V P TTV EA +++ +T PV+D D +L+GLVS+ D++
Sbjct: 9 MTT--DLVTVSPDTTVAEAA-----RLMLLHHVTAVPVVDADKRLLGLVSEGDVM----- 56
Query: 149 SGSGRADNSMFPEVDSTW-KTFNEVQKLLS------KTNGKMVGDLMTPAPVVVRETTNL 201
R + F + W + E + L + N + V ++M + + E +L
Sbjct: 57 ----RHFGAQFQSKRAQWLRMLAEGEALAPEFLAEIRINQQHVREMMHTSIISGDEEASL 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+ A L+L+ + +R+P++ +G LVGI++R +VVRA ++
Sbjct: 113 AELADLMLKHQIKRVPIL-RNGVLVGIVSRADVVRAVVE 150
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 8/65 (12%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR---AAL 239
M DL+T +P T + +AARL+L +PVVDAD +L+G+++ G+V+R A
Sbjct: 9 MTTDLVTVSP-----DTTVAEAARLMLLHHVTAVPVVDADKRLLGLVSEGDVMRHFGAQF 63
Query: 240 QIKHA 244
Q K A
Sbjct: 64 QSKRA 68
>gi|344203160|ref|YP_004788303.1| hypothetical protein [Muricauda ruestringensis DSM 13258]
gi|343955082|gb|AEM70881.1| CBS domain containing membrane protein [Muricauda ruestringensis
DSM 13258]
Length = 153
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 83/158 (52%), Gaps = 31/158 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MT +L P +++E +E L+ +I+G PV++++ +L+G++S+ D
Sbjct: 22 VSDYMT--RDLITFSPDQSIEEV-----IEALIRHKISGGPVVNENNELIGIISEGD--C 72
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ IS S + M SK +M+ ++ T + N+ DA
Sbjct: 73 IKHISDSRYYNLPMEH----------------SKVELRMIKNVET-----IDGNMNIFDA 111
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
A++ LE + RR P+++ +GKLVG I++ ++++A + IK
Sbjct: 112 AKMFLEVRRRRFPILE-NGKLVGQISQKDILKATMGIK 148
>gi|390941712|ref|YP_006405473.1| hypothetical protein Belba_0046 [Belliella baltica DSM 15883]
gi|390415140|gb|AFL82718.1| CBS domain-containing protein [Belliella baltica DSM 15883]
Length = 152
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 35/174 (20%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDW 131
+ +AAP V D M+T L P T+D LE+L +++I+G V+D
Sbjct: 13 SKKAAAP----ILVQDHMST--NLVTFYPEDTIDHV-----LELLTKRKISGAAVVDQSG 61
Query: 132 KLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPA 191
LVG++S+ D L I ++ FP V + MT
Sbjct: 62 HLVGIISEVD--CLKEIIKGKYSNTPKFPGT---------------------VAEHMTKD 98
Query: 192 PVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
+ ++ +L DAA+L L+ K RR PV+ D KLVG ++ +V+RA ++K T
Sbjct: 99 VITLKPDLSLFDAAQLFLDKKIRRFPVM-KDEKLVGQLSLSDVIRAFPKLKDTT 151
>gi|302549210|ref|ZP_07301552.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
gi|302466828|gb|EFL29921.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
Length = 223
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 15/132 (11%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE--VDSTWKTFNEV 172
+L + +T PV+D+ +G+VS+ DLL +I+ + P VD T
Sbjct: 29 LLADHDVTALPVVDELDHPIGVVSEADLLR--TIAARPDPNGLSLPPAPVDGTLSA---- 82
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
+G G+LMT V R + +AARL+ +RLPVVD G L+GI++RG
Sbjct: 83 -------DGTTAGELMTAPAVCARPEWTVVEAARLMDVEGVKRLPVVDEAGTLIGIVSRG 135
Query: 233 NVVRAALQIKHA 244
+++R L+ A
Sbjct: 136 DLLRVFLRRDEA 147
>gi|414173939|ref|ZP_11428566.1| hypothetical protein HMPREF9695_02212 [Afipia broomeae ATCC 49717]
gi|410890573|gb|EKS38372.1| hypothetical protein HMPREF9695_02212 [Afipia broomeae ATCC 49717]
Length = 241
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 31/139 (22%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-------------LDSISGSGRADNSM 158
A ++++ ++G PV+D LVG+V++ DLL LD I G GR
Sbjct: 23 AARLMLDNHLSGLPVVDLKGALVGIVTERDLLRRREIGTQRNRPRWLDFILGPGR----- 77
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
+ + VQ T G+ V ++MT V E T L D ++ + +R+PV
Sbjct: 78 --------QAADYVQ-----TAGRRVDEIMTRDVQTVTEDTPLSDVVAIMERYRIKRVPV 124
Query: 219 VDADGKLVGIITRGNVVRA 237
++++ KL GII+R N VRA
Sbjct: 125 MNSNNKLTGIISRQNFVRA 143
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+MT + V ++ DAARL+L+ LPVVD G LVGI+T +++R
Sbjct: 6 IMTRKVIKVAPGDSITDAARLMLDNHLSGLPVVDLKGALVGIVTERDLLR 55
>gi|27379751|ref|NP_771280.1| hypothetical protein bll4640 [Bradyrhizobium japonicum USDA 110]
gi|27352904|dbj|BAC49905.1| bll4640 [Bradyrhizobium japonicum USDA 110]
Length = 252
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
EA + A+++++ I+G PV+D LVG++ + D L I G+ N + S
Sbjct: 17 EAPITDAIKVMLAHHISGLPVVDSADNLVGIICESDFLRRSEI-GTEHERNRLL----SL 71
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
V K G+ V +MT PV E L++ A ++ +PV+ AD ++
Sbjct: 72 LLGAERVASEFVKERGRKVEQVMTRQPVTTNEQAPLDEVADVMERRHLNHIPVMRAD-RI 130
Query: 226 VGIITRGNVVRA 237
VGIITR + + A
Sbjct: 131 VGIITRSDFLSA 142
>gi|383764076|ref|YP_005443058.1| hypothetical protein CLDAP_31210 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384344|dbj|BAM01161.1| hypothetical protein CLDAP_31210 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 429
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 94 ELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 153
EL V TT +A V +++L+++ + PV+D++ +LVG+++D DLL ++
Sbjct: 126 ELDEVASVTT--DASVAEVVKLLLDRGVRSLPVVDEERRLVGIITDGDLLRRAGLTARIA 183
Query: 154 ADNSMFPEVDSTWKTFNEVQKLLS--KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
M P+ +++ LL+ + + G++MT + VR + AA +++
Sbjct: 184 LHKEM-PD--------DQIHALLTTLRRSPLTAGEMMTAPVISVRTDETVRTAAARMVKH 234
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRA 237
+RLPVV+ +G+L+G+++R ++ R+
Sbjct: 235 NLKRLPVVNEEGRLMGMVSRIDIFRS 260
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 128 DDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSK---TNGKMV 184
D + ++G+++D DLL R+ P + + + + + + G+
Sbjct: 317 DSERHVLGMITDGDLLR--------RSQQRQHPGLLERLRRLVVGEPAIDQVLPSAGERA 368
Query: 185 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
DLM+ + +R +L +A RL+ +RLPVVDA+G+L+G++ R +V+R ++
Sbjct: 369 ADLMSAPVITIRPDASLGEALRLMTTHAVKRLPVVDAEGRLLGLLGRASVLRGLME 424
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+ +LLL+ R LPVVD + +LVGIIT G+++R A
Sbjct: 141 EVVKLLLDRGVRSLPVVDEERRLVGIITDGDLLRRA 176
>gi|116071000|ref|ZP_01468269.1| CBS [Synechococcus sp. BL107]
gi|116066405|gb|EAU72162.1| CBS [Synechococcus sp. BL107]
Length = 157
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 19/159 (11%)
Query: 84 TVGDFMTTKEELHVVKPTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
TV D MT KP TV + + A++++ + ++G PV+D+ L+G +S+ DL
Sbjct: 6 TVADVMT--------KPVLTVRADTPLQEAVKLISDHHVSGLPVVDEQGALIGELSEKDL 57
Query: 143 LALDSISGSG----RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 198
+ +S +G D+ ++ W +V ++L G VG+LM T
Sbjct: 58 MVRESGVDAGPYVMLLDSVIYLRNPLNWD--KQVHQVL----GTTVGELMQKNSHSCIGT 111
Query: 199 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+L AA +L +RL V+D + +G++TRG+VVRA
Sbjct: 112 LDLPKAASMLHNKGTQRLFVLDHEKHPIGVLTRGDVVRA 150
>gi|417938413|ref|ZP_12581711.1| CBS domain protein [Streptococcus infantis SK970]
gi|343391503|gb|EGV04078.1| CBS domain protein [Streptococcus infantis SK970]
Length = 218
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 86/166 (51%), Gaps = 26/166 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTV-----AHAADLMREQGLHRLPVIEND-KLVGLVTEGTI-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA
Sbjct: 53 ---------AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
L+L+ K LPVVD +G+L G+IT +V A L+I E G +
Sbjct: 98 TYLMLKNKIGILPVVD-NGQLYGVITDRDVFSAFLEIAGYGEEGVR 142
>gi|374998887|ref|YP_004974385.1| hypothetical protein AZOLI_p20005 [Azospirillum lipoferum 4B]
gi|357426312|emb|CBS89217.1| conserved protein of unknown function, Cystathionine beta-synthase
domain [Azospirillum lipoferum 4B]
Length = 233
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 20/139 (14%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS-------GRADNSM 158
+A V A ++E I+G PV+D K+VG++S+ DLL + G
Sbjct: 17 DATVADAARKMLENNISGMPVLDAAGKVVGIISEGDLLRRVELGTERHRSWWLGLVSGGT 76
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
P D K++ + V D+MT V E + E+ RL+ + +R+PV
Sbjct: 77 LPAED------------FVKSHARKVADVMTAHVTTVDENASPEEVVRLMETRRIKRVPV 124
Query: 219 VDADGKLVGIITRGNVVRA 237
V G L+GII+R N++RA
Sbjct: 125 VR-QGTLIGIISRANLLRA 142
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
DLMTP + + + DAAR +LE +PV+DA GK+VGII+ G+++R
Sbjct: 5 DLMTPRVITIGTDATVADAARKMLENNISGMPVLDAAGKVVGIISEGDLLR 55
>gi|89897037|ref|YP_520524.1| hypothetical protein DSY4291 [Desulfitobacterium hafniense Y51]
gi|89336485|dbj|BAE86080.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 174
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 82/157 (52%), Gaps = 12/157 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D M T + + P T + E ++L + I+G PVID L+G+VS+ DLL
Sbjct: 28 VQDIMQTN--VITISPNTEIREI-----AKLLCDHHISGVPVIDLFGNLIGIVSEGDLLH 80
Query: 145 LDSISGSGRADNSM-FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ R ++ F ++ + + L K ++MT + + + ++E+
Sbjct: 81 KET---HPRVPEAVGFLGALIYYRGVKQYESDLKKLVALKASEIMTHEVITLDKDASIEE 137
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
AA L++ +RLP+++ +GK+VGIITR +V++ ++
Sbjct: 138 AASLMINHNVKRLPIME-NGKMVGIITRKDVIKVLIE 173
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 164 STWKTFNEVQKLLSKTNGK-----MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
+W T + ++ + + N K V D+M + + T + + A+LL + +PV
Sbjct: 3 KSWYTSTKFRQNMFQGNHKGVLAMKVQDIMQTNVITISPNTEIREIAKLLCDHHISGVPV 62
Query: 219 VDADGKLVGIITRGNVVR 236
+D G L+GI++ G+++
Sbjct: 63 IDLFGNLIGIVSEGDLLH 80
>gi|219852650|ref|YP_002467082.1| inosine-5'-monophosphate dehydrogenase [Methanosphaerula palustris
E1-9c]
gi|219546909|gb|ACL17359.1| inosine-5'-monophosphate dehydrogenase [Methanosphaerula palustris
E1-9c]
Length = 490
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 30/115 (26%)
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
I G PV+DDD +++G+VS D V+ ++SK
Sbjct: 122 IGGVPVLDDDQRIIGIVSRRD------------------------------VRAIVSKRG 151
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
+ + +MT P+ E N++DA ++ K RLPVV+++ +L+GIIT +++
Sbjct: 152 AESIRTIMTKQPITTGENINIDDALEVMYTNKVERLPVVNSEKRLLGIITMQDIL 206
>gi|150400041|ref|YP_001323808.1| CBS domain-containing protein [Methanococcus vannielii SB]
gi|150012744|gb|ABR55196.1| CBS domain containing protein [Methanococcus vannielii SB]
Length = 264
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 144 ALDSISGSGRADNSMFPEV-DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTN 200
LD I + + FP V +S K V ++ K + V DLMT +V + TN
Sbjct: 21 VLDIIELVKKTTHDTFPVVVNSKVKGIISVHDIIGKLESEQVKDLMTNRDDMIVTKPKTN 80
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+ DA R++ T + +LPVVD + ++GIIT +V+R+ ++
Sbjct: 81 IMDAGRIMFRTGFSKLPVVDEENNILGIITNTDVIRSQIE 120
>gi|332296074|ref|YP_004437997.1| hypothetical protein Thena_1247 [Thermodesulfobium narugense DSM
14796]
gi|332179177|gb|AEE14866.1| CBS domain containing protein [Thermodesulfobium narugense DSM
14796]
Length = 867
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 39/168 (23%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MT+ + V+ P T+V+EA +IL+ +G P++ D ++VG++S D+
Sbjct: 315 VKDVMTSP--VRVLSPETSVEEA-----RKILLRYGHSGVPILKGD-EIVGVLSRKDI-- 364
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+A ++ EVQK++S+ + + + +L++A
Sbjct: 365 -------DKATQHRLGQI--------EVQKIMSRN------------VITINQDASLDEA 397
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA--ALQIKHATEMGAQ 250
+L++E + RLPVV+ KLVG+ITR +++R + IK E+ +
Sbjct: 398 QKLMIEKEIGRLPVVNEKNKLVGLITRTDILRVWHGINIKKTKELSTK 445
>gi|383936301|ref|ZP_09989729.1| IMP dehydrogenase [Rheinheimera nanhaiensis E407-8]
gi|383702681|dbj|GAB59820.1| IMP dehydrogenase [Rheinheimera nanhaiensis E407-8]
Length = 139
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 25/138 (18%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T E V A++ L+ R TG PVID+ K++G +S+ D L +S
Sbjct: 14 PVTFSAEMPVEMAVDRLIRGRQTGGPVIDEQKKIIGFISEQDCLQRMLMS---------- 63
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
T+++ Q V D+M + V+ + D A+ +L K + PVV
Sbjct: 64 --------TYHDQQ-------AARVADVMNTEVLTVKSYDGIIDLAQTMLRAKPKLYPVV 108
Query: 220 DADGKLVGIITRGNVVRA 237
D DG L+GIITR +V+ A
Sbjct: 109 DDDGHLLGIITRSDVLGA 126
>gi|323701708|ref|ZP_08113379.1| putative signal transduction protein with CBS domains
[Desulfotomaculum nigrificans DSM 574]
gi|333923567|ref|YP_004497147.1| putative signal transduction protein with CBS domains
[Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323533244|gb|EGB23112.1| putative signal transduction protein with CBS domains
[Desulfotomaculum nigrificans DSM 574]
gi|333749128|gb|AEF94235.1| putative signal transduction protein with CBS domains
[Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 148
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 29/140 (20%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE------------ 161
+IL + +I+G PV+D+ KLVG+V++ DLL ++ N P+
Sbjct: 25 QILTDNKISGVPVVDEAGKLVGIVTEGDLLHKEA--------NPRIPKFVGILGGILYFG 76
Query: 162 -VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 220
VD F ++ L + ++MT + V + T++ A L+LE +R+PV +
Sbjct: 77 GVDQYKDDFKKLAALKA-------SEIMTSKVITVSKDTDVGTIATLMLENNIKRIPVTE 129
Query: 221 ADGKLVGIITRGNVVRAALQ 240
+ GK++GI++R ++++ Q
Sbjct: 130 S-GKVIGIVSRADIIKTIAQ 148
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+M + V + T +++ A++L + K +PVVD GKLVGI+T G+++
Sbjct: 5 DIMQTNVISVTKDTTIKEIAQILTDNKISGVPVVDEAGKLVGIVTEGDLLH 55
>gi|403722090|ref|ZP_10944831.1| hypothetical protein GORHZ_053_00150 [Gordonia rhizosphera NBRC
16068]
gi|403206806|dbj|GAB89162.1| hypothetical protein GORHZ_053_00150 [Gordonia rhizosphera NBRC
16068]
Length = 238
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 111 TALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF- 169
+ +E L E+ ++G PV+D D ++VG+VS+ DL+ A + P+ W F
Sbjct: 25 SVVEALAERGVSGAPVVDTDGRVVGVVSEADLIT---------AQAQIPPD---GWHRFL 72
Query: 170 NEVQKLLSKT-NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
V +T +G + +M + + + +AA L +RLPVVD DG+ +GI
Sbjct: 73 ARVGHSTQETPHGAELDTVMHSPAITIPPDATVREAATQLARHDIKRLPVVDDDGRPIGI 132
Query: 229 ITRGNVVRAALQ 240
++R +V+R L+
Sbjct: 133 VSRKDVLRVYLR 144
>gi|386001693|ref|YP_005919992.1| Putative signal transduction protein with CBS domains [Methanosaeta
harundinacea 6Ac]
gi|357209749|gb|AET64369.1| Putative signal transduction protein with CBS domains [Methanosaeta
harundinacea 6Ac]
Length = 287
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 19/185 (10%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTV---------DEAFVPTALEILVEKRITGFPVIDDDW 131
G+ +V D + +L + +P DE +P A ++ + PVID +
Sbjct: 106 GIVSVADVIRVVADLEIKRPIERYFEKMTVALWDEMPLPVAGAVMEYANVQASPVIDSEL 165
Query: 132 KLVGLVSDYDLLALDSISGSGRADN--SMFPEVDSTWKTFNEVQKL---LSKTNGKM--V 184
KLVG+VSD DL+ I S + S E + TW++ + +S+ + + V
Sbjct: 166 KLVGIVSDRDLINASVIEDSVEMSDMSSANDEDEWTWESTRDTLNFYYGVSRISLRKIPV 225
Query: 185 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 244
M PA ++ T+ + + AR+++ +LPVV A KL G++ +++ A +Q H+
Sbjct: 226 KQAMVPAVTAIK-TSEVSECARVMMRKGIDQLPVVTAHQKLAGMLKDSDLLWALIQ--HS 282
Query: 245 TEMGA 249
E GA
Sbjct: 283 LEAGA 287
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 37/136 (27%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
L+ L E+ ++G PV+ +LVG+V+ DLL PE D T
Sbjct: 27 LKALQERHVSGVPVVKGG-ELVGMVTRTDLLR--------------NPEEDQT------- 64
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
LMT P+VV ++ +AAR L E RRLPVV+ DG LVGI++
Sbjct: 65 ------------ALLMTRDPLVVHPDDDVVEAARHLAENDIRRLPVVE-DGALVGIVSVA 111
Query: 233 NVVR--AALQIKHATE 246
+V+R A L+IK E
Sbjct: 112 DVIRVVADLEIKRPIE 127
>gi|85818625|gb|EAQ39785.1| CBS domain protein [Dokdonia donghaensis MED134]
Length = 154
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 31/161 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+M+ K L P +V E + L++ +I+G PV+++ +L+G++S+ D
Sbjct: 23 VSDYMSRK--LITFSPDQSVLEV-----MNSLIKHKISGGPVVNEQNELLGIISEGD--C 73
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ IS S + M K N + + +G M N+ DA
Sbjct: 74 MKQISESRYYNMPM-----DNMKVSNHMVSNVDTIDGNM----------------NVFDA 112
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
A LE+K+RR P+V+ +GKLVG I++ +V++AAL++ T
Sbjct: 113 ANKFLESKHRRFPIVE-NGKLVGQISQKDVLKAALELNGQT 152
>gi|163848024|ref|YP_001636068.1| hypothetical protein Caur_2472 [Chloroflexus aurantiacus J-10-fl]
gi|222525911|ref|YP_002570382.1| hypothetical protein Chy400_2666 [Chloroflexus sp. Y-400-fl]
gi|163669313|gb|ABY35679.1| CBS domain containing protein [Chloroflexus aurantiacus J-10-fl]
gi|222449790|gb|ACM54056.1| CBS domain containing membrane protein [Chloroflexus sp. Y-400-fl]
Length = 435
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
E V + +L+E+ + PV+D + +++G+V+D DLL +S + P +
Sbjct: 134 ETSVGELVRLLLERGLRAMPVVDAERRVIGIVTDADLLQ-RGVSQLPLHLQQLLPGAERA 192
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
+ + D+MTP P + T +L AA L+ E ++RLPVVD G+L
Sbjct: 193 AHLAAVAAR------PERAADVMTPNPTTIPATASLTQAALLMTEHDHKRLPVVDEAGRL 246
Query: 226 VGIITRGNVVR 236
VG+++R ++++
Sbjct: 247 VGMLSRSDLLQ 257
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
PTT A + A ++ E PV+D+ +LVG++S DLL
Sbjct: 212 NPTTIPATASLTQAALLMTEHDHKRLPVVDEAGRLVGMLSRSDLLQ-------------- 257
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMT-PAPVVVRETTNLEDAARLLLETKYRRLP 217
V +T+ + +EV T K VG++M P V ET E R +L T RR+
Sbjct: 258 --TVANTFASSSEVLPGSILTTAKTVGEVMIRDVPTVTPETPLAETLDR-ILSTPRRRVV 314
Query: 218 VVDADGKLVGIITRGNVVRAA 238
VVD + ++VGII+ G+++R A
Sbjct: 315 VVDQNRRVVGIISDGDILRRA 335
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVK----PTTTVDEAFVPTALEILVEKRITGFPVID 128
AN+ A SS V G +TT + + V PT T + T IL R V+D
Sbjct: 260 ANTFASSSEVLP-GSILTTAKTVGEVMIRDVPTVTPETPLAETLDRILSTPR-RRVVVVD 317
Query: 129 DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF-------NEVQKLLSKTNG 181
+ ++VG++SD D+L RA + P + + + E++ L
Sbjct: 318 QNRRVVGIISDGDILR--------RAARPVAPGLLQRFAVWIGGGARPPELELALKNLTA 369
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
V MT + V T + A L++E + +RLPVVD +G+LVG++
Sbjct: 370 AAV---MTSPVLTVNPDTPIISAVELMIERRIKRLPVVDEEGRLVGMV 414
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
V D+M + V T++ + RLLLE R +PVVDA+ +++GI+T ++++
Sbjct: 120 VADVMNHDVISVTSETSVGELVRLLLERGLRAMPVVDAERRVIGIVTDADLLQ 172
>gi|340618018|ref|YP_004736471.1| hypothetical protein zobellia_2032 [Zobellia galactanivorans]
gi|339732815|emb|CAZ96148.1| CBS domain protein [Zobellia galactanivorans]
Length = 155
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 31/157 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MT K L KP ++ E +E+ + I+G PV+DD+ LVG++S+ D
Sbjct: 25 VSDYMTKK--LVTFKPDQSILEV-----MELFTKHNISGGPVMDDNGFLVGIISEAD--C 75
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ IS S + FN Q +L K+ V MT + ++ DA
Sbjct: 76 MKQISES---------------RYFN--QPILDKS----VEKFMTKEVETIPHDISIFDA 114
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
A + + RRLPV+ DG LVG I+R ++V AAL++
Sbjct: 115 ASIFDKHNRRRLPVM-KDGILVGQISRKDIVIAALKL 150
>gi|328952018|ref|YP_004369352.1| hypothetical protein Desac_0280 [Desulfobacca acetoxidans DSM
11109]
gi|328452342|gb|AEB08171.1| CBS domain containing membrane protein [Desulfobacca acetoxidans
DSM 11109]
Length = 222
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 19/149 (12%)
Query: 103 TVDE-AFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 161
TVDE + AL ++ E +I PV+ KLVG++SD DL A S
Sbjct: 13 TVDENTSMMKALHLMKENKIRRLPVMSHG-KLVGIISDRDL---------KEASPSKATT 62
Query: 162 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 221
+D +E+ LL++ + ++MT P+ ++ +E AA ++LE K LPVV+
Sbjct: 63 LD-----VHELYYLLAEIK---IKEIMTKNPITIQPDETIERAAVVMLENKVSGLPVVNG 114
Query: 222 DGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+LVGI+T+ ++ RA + I G Q
Sbjct: 115 KSELVGIVTQSDIFRAFVNITGIYRGGVQ 143
>gi|223478496|ref|YP_002583173.1| inosine-5'-monophosphate dehydrogenase [Thermococcus sp. AM4]
gi|214033722|gb|EEB74548.1| Inosine-5'-monophosphate dehydrogenase [Thermococcus sp. AM4]
Length = 485
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 42/145 (28%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKR-ITGFPVIDDDWKLVGLVSDYDLLALDSISGS 151
E++ + P T+D A L+EK I G PV++D K+VG++S D+
Sbjct: 101 EDVISISPDETIDYAL------FLMEKNDIDGLPVVED-GKVVGVISKKDI--------- 144
Query: 152 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
++ P GK+V ++MT P+ V E+ E+A L+ E
Sbjct: 145 -----AVKP--------------------GKLVREVMTGEPITVPESVTAEEALNLMFEH 179
Query: 212 KYRRLPVVDADGKLVGIITRGNVVR 236
+ RLPVV+++GKLVGIIT ++ +
Sbjct: 180 RIDRLPVVNSEGKLVGIITMSDLAK 204
>gi|444913606|ref|ZP_21233756.1| CBS domain protein [Cystobacter fuscus DSM 2262]
gi|444715730|gb|ELW56594.1| CBS domain protein [Cystobacter fuscus DSM 2262]
Length = 290
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 56 VSALRRSSAVFASGTLTANSA-----APSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVP 110
V A +R + G L A A AP D + T E + P T++EA
Sbjct: 109 VDASKRMVGILTDGDLLAAMAGEHLSAPGDPWELPVDMLMTHEPF-ALGPDATLEEAA-- 165
Query: 111 TALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 170
+L++ + PV+DDD +LVG++S+ DL + + GS R E +
Sbjct: 166 ---GVLIDADVRHLPVVDDDERLVGILSERDLR--ERLGGSAR-------EWPRAARQAL 213
Query: 171 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
EV+ +G+ MTP P+ +R ++ A + + + +PVVD D +L+GI++
Sbjct: 214 EVR----------LGEAMTPDPLALRSGASVAQALEIFTDERVGAIPVVDEDERLLGILS 263
Query: 231 RGNVVR 236
+++R
Sbjct: 264 YIDLLR 269
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 30/138 (21%)
Query: 113 LEILVEK--RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 170
LE L++K + PVI + +LVG+V+ D+L
Sbjct: 28 LEGLLKKFRHVRHLPVIGANSRLVGMVTRMDVL--------------------------- 60
Query: 171 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
E LL + V DL++ V + E +L +AAR + + + LPVVDA ++VGI+T
Sbjct: 61 EEALLLGRERWVRVRDLLSCPVVSISENESLPEAARAMRKAQVHSLPVVDASKRMVGILT 120
Query: 231 RGNVVRAALQIKHATEMG 248
G+++ AA+ +H + G
Sbjct: 121 DGDLL-AAMAGEHLSAPG 137
>gi|456356702|dbj|BAM91147.1| hypothetical protein S58_51680 [Agromonas oligotrophica S58]
Length = 141
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 20/114 (17%)
Query: 124 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 183
+PV+++D +++G+V+ +D+L + + N M P L+++T
Sbjct: 41 YPVVEND-EVIGIVTKFDVLKCFAFTP-----NQMLPRY----------SDLMNRT---- 80
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
V D+MT + VR T L +L++E + R LPV D D LVGI+ R ++VRA
Sbjct: 81 VADVMTSEFIYVRPDTKLTRVLQLMVEHRIRSLPVTDGDNSLVGIVAREDIVRA 134
>gi|223932398|ref|ZP_03624400.1| putative signal transduction protein with CBS domains
[Streptococcus suis 89/1591]
gi|302023619|ref|ZP_07248830.1| hypothetical protein Ssui0_03021 [Streptococcus suis 05HAS68]
gi|330832631|ref|YP_004401456.1| putative signal transduction protein with CBS domains
[Streptococcus suis ST3]
gi|386583892|ref|YP_006080295.1| putative signal transduction protein [Streptococcus suis D9]
gi|389856795|ref|YP_006359038.1| putative signal transduction protein [Streptococcus suis ST1]
gi|417092660|ref|ZP_11957276.1| putative signal transduction protein with CBS domain [Streptococcus
suis R61]
gi|223898852|gb|EEF65211.1| putative signal transduction protein with CBS domains
[Streptococcus suis 89/1591]
gi|329306854|gb|AEB81270.1| putative signal transduction protein with CBS domains
[Streptococcus suis ST3]
gi|353532339|gb|EHC02011.1| putative signal transduction protein with CBS domain [Streptococcus
suis R61]
gi|353736038|gb|AER17047.1| putative signal transduction protein with CBS domains
[Streptococcus suis D9]
gi|353740513|gb|AER21520.1| putative signal transduction protein with CBS domains
[Streptococcus suis ST1]
Length = 218
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 26/167 (15%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
+V DFMT K + + P TT+ A +I+ E+ + PVI++D KLVGLV++
Sbjct: 2 SVKDFMTRK--VVYISPDTTI-----AHAADIMREQDLHRLPVIEND-KLVGLVTE---- 49
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+I+ + + +T + E+ LL+KT V D+M + V +LED
Sbjct: 50 --GTIAEASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIKNVITVSGYASLED 96
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
AA L+ + K LPVVD +G+L G+IT ++ A L + E G +
Sbjct: 97 AAYLMYKNKVGILPVVD-NGQLYGVITDRDIFAAFLHVSGYGEEGVR 142
>gi|121595740|ref|YP_987636.1| signal transduction protein [Acidovorax sp. JS42]
gi|120607820|gb|ABM43560.1| putative signal transduction protein with CBS domains [Acidovorax
sp. JS42]
Length = 226
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 26/179 (14%)
Query: 59 LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVE 118
LR AV A P + VGD MTT V P V++A+ + L E
Sbjct: 63 LRLLEAVSAYVQTEQGPVQPRQPLSRVGDVMTTGA--LTVAPDQRVNDAW-----QTLAE 115
Query: 119 KRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSK 178
I PV++D ++VGL+ D+ LD + PE + + ++ +S+
Sbjct: 116 HEIAQAPVVNDQGQVVGLLLRADMAPLD-----------LLPEPGAVKQAIELARRPVSE 164
Query: 179 TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+++P P V E T L A +LL+T LPV D G L G I+R +++RA
Sbjct: 165 V-------MVSPVPTVA-EDTELRRVAGVLLDTGLPGLPVTDERGLLAGFISRTDILRA 215
>gi|456392581|gb|EMF57924.1| hypothetical protein SBD_0596 [Streptomyces bottropensis ATCC
25435]
Length = 217
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 18/132 (13%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLL----ALDSISGSGRADNSMFPEVDSTWKT 168
+++L E +T PV+DD +G+VS+ DLL A D SG + P +++ W+
Sbjct: 27 VKLLAENDVTAVPVVDDLDHPIGVVSEADLLRKSSAQDDPSGL-----TPVPHLEA-WER 80
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+K G +LM+ V R + +AAR + +RLPVVD G+L GI
Sbjct: 81 --------AKAEGASAEELMSAPAVCARPEWTVVEAARFMSVRNVKRLPVVDEAGRLRGI 132
Query: 229 ITRGNVVRAALQ 240
++RG+++R L+
Sbjct: 133 VSRGDLLRIFLR 144
>gi|78184351|ref|YP_376786.1| CBS [Synechococcus sp. CC9902]
gi|78168645|gb|ABB25742.1| CBS [Synechococcus sp. CC9902]
Length = 157
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 19/159 (11%)
Query: 84 TVGDFMTTKEELHVVKPTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
TV D MT KP TV + + A++++ + ++G PV+D+ L+G +S+ DL
Sbjct: 6 TVADVMT--------KPVLTVRADTPLQEAVKLISDHHVSGLPVVDEQGALIGELSEKDL 57
Query: 143 LALDSISGSG----RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 198
+ +S +G D+ ++ W +V ++L G VG+LM T
Sbjct: 58 MVRESGVDAGPYVMLLDSVIYLRNPLNWD--KQVHQVL----GTTVGELMQKNSHSCDGT 111
Query: 199 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+L AA +L +RL V+D + +G++TRG+VVRA
Sbjct: 112 LDLPKAASMLHNKGTQRLFVLDNEKNPIGVLTRGDVVRA 150
>gi|294496136|ref|YP_003542629.1| hypothetical protein Mmah_1488 [Methanohalophilus mahii DSM 5219]
gi|292667135|gb|ADE36984.1| CBS domain containing protein [Methanohalophilus mahii DSM 5219]
Length = 285
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 36/131 (27%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
L IL +K+++G PV+ D+ ++VG+VS R++
Sbjct: 28 LNILKDKKVSGVPVLKDN-RVVGIVS--------------RSN----------------- 55
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
LLS + + LMT P+ ++ N++ AA+ L+E +RRLPVVD D KL G+IT
Sbjct: 56 --LLSNPEEEQIALLMTRDPLKIKPEDNIKKAAQYLMEYGFRRLPVVDDDDKLEGMITVA 113
Query: 233 NVV--RAALQI 241
++V A+LQ+
Sbjct: 114 DIVASMASLQL 124
>gi|296532012|ref|ZP_06894792.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296267665|gb|EFH13510.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 251
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MT + V PTT + T + E+ ++G PV+D+ +L+GLV++ D+
Sbjct: 25 VQDLMT--RTVLTVPPTTPLA-----TLAALFAERGVSGVPVVDEAGRLLGLVTEGDM-- 75
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
L ++ + + ++ E ++ +G+ D+M+ V +++A
Sbjct: 76 LRRLAAPAERPRPWYQRLLASAPRQAEE---FARIHGRCAQDVMSTGLVTAPPEMPVDEA 132
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
A LL + + RRLPV+ +G+LVGI++R +++RA L
Sbjct: 133 AALLEKHRIRRLPVLR-EGRLVGILSRADLMRAML 166
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 177 SKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+K + V DLMT + V TT L A L E +PVVD G+L+G++T G+++R
Sbjct: 18 NKEDAMQVQDLMTRTVLTVPPTTPLATLAALFAERGVSGVPVVDEAGRLLGLVTEGDMLR 77
>gi|419966026|ref|ZP_14481960.1| hypothetical protein WSS_A27905 [Rhodococcus opacus M213]
gi|432343476|ref|ZP_19592646.1| hypothetical protein Rwratislav_40240 [Rhodococcus wratislaviensis
IFP 2016]
gi|414568581|gb|EKT79340.1| hypothetical protein WSS_A27905 [Rhodococcus opacus M213]
gi|430771501|gb|ELB87359.1| hypothetical protein Rwratislav_40240 [Rhodococcus wratislaviensis
IFP 2016]
Length = 188
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 33/164 (20%)
Query: 89 MTTKEELHVV-KPTTTVDEA-FVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
M T L+V+ +P V ++ + TA +L E PV+DD +LVG+++ D+L
Sbjct: 1 MVTMRVLNVMQRPVRVVRQSDSMRTAAVLLAEFGFAAVPVVDDHDRLVGMLNSGDVL--- 57
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
RA + + + VG++MT V + D ++
Sbjct: 58 ------RAGTA----------------------SSETVGEVMTAPAVAAPMYQYVADVSQ 89
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+LL R LPVVD DG++VGI++R +VVR L+ +GAQ
Sbjct: 90 MLLHQGLRSLPVVDIDGRVVGILSRSDVVRLMLKPDETIAVGAQ 133
>gi|448417455|ref|ZP_21579391.1| zn-dependent protease [Halosarcina pallida JCM 14848]
gi|445677943|gb|ELZ30439.1| zn-dependent protease [Halosarcina pallida JCM 14848]
Length = 392
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 35/154 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT + L VV T+V E L+ + +R TG+PV+ + LVG+V+ D
Sbjct: 249 TVRDIMTERNRLDVVDVRTSVAEL-----LDRMFRERHTGYPVMKNG-HLVGMVTLNDA- 301
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ NEV++ + +VGD+M+ V N D
Sbjct: 302 -----------------------RSVNEVER-----DAYLVGDVMSGELTTVLPDANAMD 333
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
A ++ E RLPVVD G+LVG+I+R ++V A
Sbjct: 334 AITVMQENGVGRLPVVDESGELVGLISRSDLVTA 367
>gi|258404842|ref|YP_003197584.1| hypothetical protein Dret_0714 [Desulfohalobium retbaense DSM 5692]
gi|257797069|gb|ACV68006.1| CBS domain containing protein [Desulfohalobium retbaense DSM 5692]
Length = 227
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 24/166 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V ++MTTK +H V T+ EA + L + I PV+D +L+G+V+D D+
Sbjct: 3 VENWMTTK--VHTVAADATLMEAS-----KTLKDYAIRRLPVVDSHGRLLGIVTDRDI-- 53
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S +D +E+ LLS + + D+MTP+PV VR + A
Sbjct: 54 -------KEASPSRATTLD-----IHELYYLLSAIS---LQDIMTPSPVTVRARDTVGRA 98
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
A L+ LPVVD D +VGIIT ++ I A + G Q
Sbjct: 99 AILMRRHTIEGLPVVDDDNTVVGIITESDIFDVLTTITGARQPGIQ 144
>gi|344168697|emb|CCA80999.1| conserved hypothetical protein (cystathionine-beta-synthase-CBS
domain) [blood disease bacterium R229]
Length = 378
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 16/129 (12%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
VP AL +L + PV+DD+ +L+G+V+ DL + + R + W
Sbjct: 254 VPHALRLLQRHGVKALPVLDDEHRLIGIVTRADLTGTAARARRQRLRD---------WFA 304
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ VG +MTP + +R + D + + +PVVDA G+L GI
Sbjct: 305 IGAMTP-------PRVGGVMTPRVLTIRADAPMADLVPMFASAGHHHIPVVDAHGRLAGI 357
Query: 229 ITRGNVVRA 237
+T+ +++ A
Sbjct: 358 LTQADIIHA 366
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 173 QKLLSKT-NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
Q+ ++T + D+MTP+ V V T++ A RLL + LPV+D + +L+GI+TR
Sbjct: 225 QQAYARTFHALTCADIMTPSVVTVSAATSVPHALRLLQRHGVKALPVLDDEHRLIGIVTR 284
Query: 232 GNV 234
++
Sbjct: 285 ADL 287
>gi|322387419|ref|ZP_08061029.1| CBS domain protein [Streptococcus infantis ATCC 700779]
gi|417936147|ref|ZP_12579464.1| CBS domain protein [Streptococcus infantis X]
gi|419842595|ref|ZP_14365932.1| CBS domain protein [Streptococcus infantis ATCC 700779]
gi|321141948|gb|EFX37443.1| CBS domain protein [Streptococcus infantis ATCC 700779]
gi|343403056|gb|EGV15561.1| CBS domain protein [Streptococcus infantis X]
gi|385703540|gb|EIG40653.1| CBS domain protein [Streptococcus infantis ATCC 700779]
Length = 218
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTV-----AHAADLMREQGLHRLPVIEND-KLVGLVTEGTI-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA
Sbjct: 53 ---------AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
L+L+ K LPVVD +G+L G+IT +V A L+I E G
Sbjct: 98 TYLMLKNKIGILPVVD-NGQLYGVITDRDVFSAFLEIAGYGEEG 140
>gi|255534552|ref|YP_003094923.1| Inosine-5'-monophosphate dehydrogenase [Flavobacteriaceae bacterium
3519-10]
gi|255340748|gb|ACU06861.1| Inosine-5'-monophosphate dehydrogenase [Flavobacteriaceae bacterium
3519-10]
Length = 486
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 69/131 (52%), Gaps = 31/131 (23%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T + + A E++ +I+G PV+D D KL+G++++ D+ +++S
Sbjct: 100 PVTLSKDHTLMEAKEMMANFKISGLPVVDADNKLIGIITNRDVKYQENLSA--------- 150
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
+V++L++K L+T + TNLE A ++LL+ + +LP+V
Sbjct: 151 -----------KVEELMTKDK------LITS-----DKATNLEQAKQILLKNRVEKLPIV 188
Query: 220 DADGKLVGIIT 230
D++ KLVG+IT
Sbjct: 189 DSEFKLVGLIT 199
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 188 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
M PV + + L +A ++ K LPVVDAD KL+GIIT +V
Sbjct: 96 MISDPVTLSKDHTLMEAKEMMANFKISGLPVVDADNKLIGIITNRDV 142
>gi|297529034|ref|YP_003670309.1| hypothetical protein GC56T3_0685 [Geobacillus sp. C56-T3]
gi|297252286|gb|ADI25732.1| CBS domain containing membrane protein [Geobacillus sp. C56-T3]
Length = 214
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
AL++L RI PV+D + +LVGLV+ DL A S+F + W+
Sbjct: 23 ALQLLRHHRIRHLPVVDGEGRLVGLVTSQDL---------REASPSIF-RLHEQWEDLE- 71
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
K VGD+M +V +E+ A L E + LP+V+ GKLVGIIT+
Sbjct: 72 ----------KPVGDVMKTDLIVGHPLDFVEEVAALFYEHRIGCLPIVN-HGKLVGIITQ 120
Query: 232 GNVVRAALQIKHATEMGAQ 250
+++R +++ + G+Q
Sbjct: 121 TDLLRTFIELTGVHQPGSQ 139
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 183 MVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
M+ + + APV+ +R T + +A +LL + R LPVVD +G+LVG++T ++ A+
Sbjct: 1 MLVEQVMKAPVITLRATNTIAEALQLLRHHRIRHLPVVDGEGRLVGLVTSQDLREAS 57
>gi|157374858|ref|YP_001473458.1| hypothetical protein Ssed_1719 [Shewanella sediminis HAW-EB3]
gi|157317232|gb|ABV36330.1| CBS domain containing membrane protein [Shewanella sediminis
HAW-EB3]
Length = 143
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 25/129 (19%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
+ A+E+ ++ G PV+D++ ++G +S+ D L +++T+
Sbjct: 23 IAQAVELFLQAGQIGGPVVDENKHVIGFISEQDCL---------------IKMLEATY-- 65
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
NE N VGD+M P+ R ++ D A+++ K + PV+D + +L+GI
Sbjct: 66 LNE--------NHYTVGDVMHSEPLTARPEGSVFDLAQIMTSAKPKIFPVIDENDQLIGI 117
Query: 229 ITRGNVVRA 237
ITR +V+RA
Sbjct: 118 ITRSDVLRA 126
>gi|46581178|ref|YP_011986.1| hypothetical protein DVU2774 [Desulfovibrio vulgaris str.
Hildenborough]
gi|387154408|ref|YP_005703344.1| hypothetical protein Deval_2564 [Desulfovibrio vulgaris RCH1]
gi|46450599|gb|AAS97246.1| CBS domain protein/ACT domain protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234852|gb|ADP87706.1| CBS domain containing membrane protein [Desulfovibrio vulgaris
RCH1]
Length = 227
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A +++ E PV+D + KL+G+VSD D+ A S +D +E
Sbjct: 23 ASKLMKENGFRRLPVLDGNGKLIGIVSDRDI---------KEASPSKATTLD-----MHE 68
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+ LLS+ V D+MT P+ V+ +E A L++E +PVVD +G+LVGIIT
Sbjct: 69 LYYLLSEIK---VKDIMTRDPICVQPDETVERVALLMIEKHIGGMPVVDEEGQLVGIITD 125
Query: 232 GNVVRAALQIKHATEMGAQ 250
++ + + I G Q
Sbjct: 126 SDIFKVLIAITGVRSGGVQ 144
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
++ + MT + V T++ A++L+ E +RRLPV+D +GKL+GI++ ++ A+
Sbjct: 2 LIREWMTRNVITVTPDTSMMKASKLMKENGFRRLPVLDGNGKLIGIVSDRDIKEAS 57
>gi|365899445|ref|ZP_09437351.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365419812|emb|CCE09893.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 249
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A ++++ I PV+D KLVG+V+D D + I G+ R
Sbjct: 23 AAKVMLRNHIGALPVVDTGGKLVGIVTDGDFIRRAEI-GTARKRGRWL----GLLVGRGR 77
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+ +++G+ V ++MTP PV V E L + L+ +RLPVV D +LVGI++
Sbjct: 78 INADFIRSHGRAVCEIMTPDPVTVSENATLPEIVGLMERKHVKRLPVVSGD-RLVGIVSY 136
Query: 232 GNVVRAALQIKHATEM 247
+ V+A + ATE+
Sbjct: 137 RDFVQAITDL--ATEL 150
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+M+ + + V T + +AA+++L LPVVD GKLVGI+T G+ +R A
Sbjct: 6 IMSRSVITVTPGTPIVEAAKVMLRNHIGALPVVDTGGKLVGIVTDGDFIRRA 57
>gi|300692864|ref|YP_003753859.1| hypothetical protein RPSI07_3251 [Ralstonia solanacearum PSI07]
gi|299079924|emb|CBJ52601.1| conserved protein of unknown function
(cystathionine-beta-synthase-CBS domain) [Ralstonia
solanacearum PSI07]
Length = 378
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 16/129 (12%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
VP AL +L + PV+DD+ +L+G+V+ DL + + R + W
Sbjct: 254 VPHALRLLQRHGVKALPVLDDEHRLIGIVTRADLTGTAARARRQRLRD---------WFA 304
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ VG +MTP + +R + D + + +PVVDA G+L GI
Sbjct: 305 IGAMTP-------PRVGGVMTPRVLTIRADAPMADLVPMFASAGHHHIPVVDAHGRLAGI 357
Query: 229 ITRGNVVRA 237
+T+ +++ A
Sbjct: 358 LTQADIIHA 366
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 173 QKLLSKT-NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
Q+ ++T + D+MTP+ V V T++ A RLL + LPV+D + +L+GI+TR
Sbjct: 225 QQAYARTFHALTCADIMTPSVVTVSAATSVPHALRLLQRHGVKALPVLDDEHRLIGIVTR 284
Query: 232 GNV 234
++
Sbjct: 285 ADL 287
>gi|389689835|ref|ZP_10178948.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
gi|388589965|gb|EIM30252.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
Length = 239
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 19/144 (13%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V+P+ TV EA +++ RI+G PV D LVG++S+ DLL + G+ R
Sbjct: 14 VEPSATVAEA-----ARLMLADRISGLPVTTRDGTLVGMISEGDLLRRGEL-GTDRK--- 64
Query: 158 MFPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 213
S+W F + +T+G+ V +M+ PV R LE+ +
Sbjct: 65 -----RSSWLEFLVGPGTLADEYVRTHGRKVEQVMSGDPVTTRRDAPLEEVVTAMGRHGI 119
Query: 214 RRLPVVDADGKLVGIITRGNVVRA 237
+RLPV+++ K+VGI+ R +V+RA
Sbjct: 120 KRLPVLESR-KVVGIVARSDVLRA 142
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V D+M + V + + +AARL+L + LPV DG LVG+I+ G+++R
Sbjct: 2 IVEDVMATPVISVEPSATVAEAARLMLADRISGLPVTTRDGTLVGMISEGDLLR 55
>gi|392957843|ref|ZP_10323363.1| CBS domain containing membrane protein [Bacillus macauensis
ZFHKF-1]
gi|391876192|gb|EIT84792.1| CBS domain containing membrane protein [Bacillus macauensis
ZFHKF-1]
Length = 160
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFM + +++V T+ E +E+L + + G PV+D + KL+ ++SD D+L
Sbjct: 3 VQDFMIS--DVYVAHLDQTLSEV-----MEMLARQNVGGMPVVDHEGKLLSMISDGDILR 55
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV---VVRETTNL 201
++ R F V ++ E ++++ T + +L+ P + V +
Sbjct: 56 --ALKPKSRHMYDFFSFV--FYEEQAEFEEVIRHTGATPLRELL-PKRIKTYTVSPQDEM 110
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
E A LL + +++LPV+D +VGII+RG++++
Sbjct: 111 EHALGLLAKHHFKKLPVIDEQQHVVGIISRGDIIK 145
>gi|312136467|ref|YP_004003804.1| signal transduction protein with cbs domains [Methanothermus
fervidus DSM 2088]
gi|311224186|gb|ADP77042.1| putative signal transduction protein with CBS domains
[Methanothermus fervidus DSM 2088]
Length = 279
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 22/128 (17%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
+ A ++++ I+ PVI++D +LVG++S+ D+ +L I G WK
Sbjct: 20 ISRARNLMLKNDISHLPVINEDEELVGILSETDIASLLKIGGPA-------------WKR 66
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ +V +MT PV V +++DAA L+L LPVV+ DGK++GI
Sbjct: 67 --------RPIDNILVKRIMTKNPVTVSPNEDIKDAADLMLRKDISALPVVE-DGKILGI 117
Query: 229 ITRGNVVR 236
+T+ ++VR
Sbjct: 118 VTKTDLVR 125
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSD 139
G Y V D M+ K TV+E + + L++K V+ + +G+++
Sbjct: 132 KGRYKVADLMS--------KDVVTVNENTTLSHVAKLLDKNNISRVVVTAGKEPIGIITA 183
Query: 140 YDLL--ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 197
D+L LD S +G A +F +K V+ + + T GD+MT + + +
Sbjct: 184 TDILFAKLDKPS-TGVATEKIFFVRVRPYKKKKRVRLISTLT----AGDIMTDDLITINQ 238
Query: 198 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+L AA+++++ K LPV+D DGKLVGI+T+ +++RA
Sbjct: 239 DFDLSKAAKIMIKNKIGSLPVIDDDGKLVGIVTKTDIIRA 278
>gi|39937301|ref|NP_949577.1| hypothetical protein RPA4241 [Rhodopseudomonas palustris CGA009]
gi|192293081|ref|YP_001993686.1| hypothetical protein Rpal_4720 [Rhodopseudomonas palustris TIE-1]
gi|39651159|emb|CAE29682.1| CBS domain [Rhodopseudomonas palustris CGA009]
gi|192286830|gb|ACF03211.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
TIE-1]
Length = 130
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 20/117 (17%)
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
+PV++D +++G+V+ YD L+ + + M P D L++++
Sbjct: 26 FNAYPVVED-QRVIGMVTKYDFLSCFAFHPT-----QMLPHYDD----------LMNRS- 68
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
VGD+M+ + V T L +L++E + R +PV+DAD KL GII+R +V++A
Sbjct: 69 ---VGDIMSGDFLYVHSDTKLTRVLQLMVEHQTRSIPVLDADRKLDGIISREDVIKA 122
>gi|225012062|ref|ZP_03702499.1| putative signal transduction protein with CBS domains
[Flavobacteria bacterium MS024-2A]
gi|225003617|gb|EEG41590.1| putative signal transduction protein with CBS domains
[Flavobacteria bacterium MS024-2A]
Length = 154
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 31/162 (19%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT +L V KP T+ +E ++ RI+G PV++++ LVG++S+ D
Sbjct: 22 TVSDIMT--HQLIVFKPEDTIH-----VVMEAFIKNRISGGPVVNEEGDLVGVISEAD-- 72
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+ IS S + FN +L K+ V MT + ++ D
Sbjct: 73 CMKEISDS---------------RYFN--MPILDKS----VSYFMTKKVDTIESNMSVFD 111
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
AA L ++ RR PV+ + +LVG ++R ++V AAL +K T
Sbjct: 112 AAALFSKSSRRRYPVMKGN-RLVGQVSRKDIVIAALNMKSHT 152
>gi|57242158|ref|ZP_00370098.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
RM3195]
gi|57017350|gb|EAL54131.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
RM3195]
Length = 484
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 33/135 (24%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
++ P A + ALE++ E RI+G PV+D++ KL+G++++ DL
Sbjct: 93 IIDPIFIAPNASIYEALELMAEYRISGVPVVDEERKLLGILTNRDL-------------- 138
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRR 215
+ S N + V ++MT AP++ + L+DA ++ K +
Sbjct: 139 -----------------RFESNFNNR-VENVMTKAPLITAPKGCTLDDAEKIFSTNKVEK 180
Query: 216 LPVVDADGKLVGIIT 230
LP+VD LVG+IT
Sbjct: 181 LPIVDESNHLVGLIT 195
>gi|383790514|ref|YP_005475088.1| putative signal transduction protein [Spirochaeta africana DSM
8902]
gi|383107048|gb|AFG37381.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Spirochaeta africana DSM 8902]
Length = 212
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T V A +L + R PV+++ KL+G+VS+ DLL G
Sbjct: 11 PVTVEKTTSVTDAQALLRQGRFHRLPVLNNRQKLIGIVSEKDLLYAAPSPG--------- 61
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
T E+ +LL+K N VGD+MT + V T +EDAA ++++ LPV+
Sbjct: 62 -----TALDVYEMSELLNKLN---VGDVMTEDVITVDADTLVEDAAGIMVDNNIGGLPVM 113
Query: 220 DADGKLVGIITRGNVVRAALQI 241
DG+L+GI+T ++ R +++
Sbjct: 114 Q-DGQLIGIVTESDLFRLFIEL 134
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 38/55 (69%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
V +MT +PV V +TT++ DA LL + ++ RLPV++ KL+GI++ +++ AA
Sbjct: 3 VAAIMTGSPVTVEKTTSVTDAQALLRQGRFHRLPVLNNRQKLIGIVSEKDLLYAA 57
>gi|345878370|ref|ZP_08830087.1| hypothetical protein Rifp1Sym_bz00180 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344224626|gb|EGV51012.1| hypothetical protein Rifp1Sym_bz00180 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 221
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 66 FASGTLTANSAAPSSGVYT--VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITG 123
+ G N+ A +++ V D MT P T +A + + ++ R +G
Sbjct: 50 LSHGETRENNQAYEEELFSMLVRDIMTNA-------PKTVSPDAKLLEVVSLMCLFRFSG 102
Query: 124 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 183
PV++D K+ G+V++ D+L D + P+ DS + +V L
Sbjct: 103 LPVVED-GKVKGIVAEKDVLHRMFPGLEDFKDGMVAPDYDSMLTQYKDVVTL-------K 154
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 243
V D+MT + V ++ AA +++ K+RR+PV + DG+L+G+++ G++ +A Q
Sbjct: 155 VADVMTSRVITVDPDMHILKAATVMIRHKFRRIPVAE-DGELLGMLSLGDIHKAIFQYNI 213
Query: 244 ATEM 247
++ M
Sbjct: 214 SSNM 217
>gi|332158567|ref|YP_004423846.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. NA2]
gi|331034030|gb|AEC51842.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. NA2]
Length = 485
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 42/144 (29%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKR-ITGFPVIDDDWKLVGLVSDYDLLALDSISGS 151
E++ + P T+D A L+EK I G PV++ D ++VG+++ D+ A +
Sbjct: 101 EDVITIAPDETIDYAL------FLMEKHGIDGLPVVEGD-RVVGIITKKDIAARE----- 148
Query: 152 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
G+ V +LMT + V E+ ++E+A ++++E
Sbjct: 149 -----------------------------GRTVKELMTREVITVPESVDVEEALKIMMEN 179
Query: 212 KYRRLPVVDADGKLVGIITRGNVV 235
+ RLPVV+ DGKLVG+IT ++V
Sbjct: 180 RIDRLPVVNEDGKLVGLITMSDLV 203
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVID 128
G +T A G TV + MT + V+ +VD V AL+I++E RI PV++
Sbjct: 137 GIITKKDIAAREG-RTVKELMTRE----VITVPESVD---VEEALKIMMENRIDRLPVVN 188
Query: 129 DDWKLVGLVSDYDLLA 144
+D KLVGL++ DL+A
Sbjct: 189 EDGKLVGLITMSDLVA 204
>gi|399576936|ref|ZP_10770691.1| cbs-domain-containing membrane protein [Halogranum salarium B-1]
gi|399238380|gb|EJN59309.1| cbs-domain-containing membrane protein [Halogranum salarium B-1]
Length = 165
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP--------EVDSTWKTFNEV 172
GFPV+DDD +VG+V+ +D+++L FP VD +WK ++
Sbjct: 32 FNGFPVVDDDGHVVGIVTQHDVVSLFQTKDRTLWIPVGFPPFMETLTYAVDVSWKDL-DL 90
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL--ETKYRRLPVVDADGKLVGIIT 230
++ GK V D+MT V V + + LL E RLPVVD G LVGII
Sbjct: 91 GVDAVRSAGKPVRDVMTTDVVTVAPDDDFDHVLDLLADDERDINRLPVVDDGGVLVGIIA 150
Query: 231 RGNVVRA 237
R +V+RA
Sbjct: 151 RQDVLRA 157
>gi|399035557|ref|ZP_10732972.1| CBS domain-containing protein [Rhizobium sp. CF122]
gi|398066688|gb|EJL58247.1| CBS domain-containing protein [Rhizobium sp. CF122]
Length = 218
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 25/145 (17%)
Query: 101 TTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG---SGRADNS 157
TT ++ V A++++V K I+G PVID+D L GL+++ DL+ G +G DN+
Sbjct: 12 TTISADSSVHQAIDLMVAKNISGLPVIDNDGNLCGLLTEGDLMRRIEFGGGRSAGNPDNT 71
Query: 158 MFPEVDS-----TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
+ D +W+ F D+M+ + + V T A ++ + K
Sbjct: 72 SLVDFDDYIRSRSWRVF----------------DVMSASVISVTPETPAAAVAEVMFQHK 115
Query: 213 YRRLPVVDADGKLVGIITRGNVVRA 237
+R+PVV +L+GI++R ++++
Sbjct: 116 IKRVPVVSGK-RLLGIVSRIDLLKG 139
>gi|394987874|ref|ZP_10380713.1| hypothetical protein SCD_00274 [Sulfuricella denitrificans skB26]
gi|393793093|dbj|GAB70352.1| hypothetical protein SCD_00274 [Sulfuricella denitrificans skB26]
Length = 215
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 23/134 (17%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
E+ + A LV RI PV+D ++LVG+VS+ DLL + ++
Sbjct: 96 ESRIENAWRTLVTGRIRQAPVLDSAYRLVGIVSERDLLTVLNVEDGA------------- 142
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
V+ +L++T V ++M V ++ AR+LL+T + +PVV+ G++
Sbjct: 143 ------VRDVLART----VAEVMVSPVVSTDPIADIRRVARVLLDTGFTGVPVVNEAGEM 192
Query: 226 VGIITRGNVVRAAL 239
VG ++RG+++RA +
Sbjct: 193 VGFLSRGDILRAVI 206
>gi|148239502|ref|YP_001224889.1| hypothetical protein SynWH7803_1166 [Synechococcus sp. WH 7803]
gi|147848041|emb|CAK23592.1| CBS domain containing protein [Synechococcus sp. WH 7803]
Length = 156
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 19/159 (11%)
Query: 84 TVGDFMTTKEELHVVKPTTTVD-EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
TVG+ M+ P TV E + A+ +L + I+G PV+ DD LVG +++ +L
Sbjct: 6 TVGEVMSA--------PVLTVTPETPLKDAVTLLSDHHISGVPVVGDDGTLVGELTEQNL 57
Query: 143 LALDSISGSGRA----DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 198
+ +S +G D+ ++ W +V ++L G V DLM+ +
Sbjct: 58 MVRESGVDAGPYVMLLDSVIYLRNPLNWD--KQVHQVL----GNTVADLMSRDSHSCAHS 111
Query: 199 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
L AA +L E +RL V+D + + VG++TRG+VVRA
Sbjct: 112 LPLPKAASMLHEKGTQRLIVIDDERRPVGMLTRGDVVRA 150
>gi|152991023|ref|YP_001356745.1| inosine 5'-monophosphate dehydrogenase [Nitratiruptor sp. SB155-2]
gi|151422884|dbj|BAF70388.1| inosine-5'-monophosphate dehydrogenase [Nitratiruptor sp. SB155-2]
Length = 481
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 38/134 (28%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
+ P T+ EA +I+ E RI+G PV+D+D L+G++++ DL
Sbjct: 99 IHPDATIGEAE-----KIMSEYRISGVPVVDEDMHLLGILTNRDL--------------- 138
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRL 216
K K V ++MT P+V + LE+AA + E K +L
Sbjct: 139 -----------------RFEKDFSKKVSEVMTKMPLVTAKPGITLEEAAEKMNEHKIEKL 181
Query: 217 PVVDADGKLVGIIT 230
P++DA+G+L G++T
Sbjct: 182 PIIDAEGRLKGLVT 195
>gi|393762004|ref|ZP_10350633.1| hypothetical protein AGRI_03459 [Alishewanella agri BL06]
gi|392607036|gb|EIW89918.1| hypothetical protein AGRI_03459 [Alishewanella agri BL06]
Length = 139
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 32/153 (20%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+M P T + V A++ L++ R TG PVID K++G +S+ D LA
Sbjct: 6 VADYMNRH-------PVTFDADMPVEMAVDRLIKGRQTGGPVIDAQRKIIGFISEQDCLA 58
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+S T+++ Q V D+M + V+E + D
Sbjct: 59 RMLMS------------------TYHDQQ-------AARVSDVMRTEVLTVKEYDGIIDL 93
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
A+ +L+ K + PVVD +G L+GIITR +V+ A
Sbjct: 94 AQTMLKAKPKLYPVVDDNGHLLGIITRSDVLGA 126
>gi|258515971|ref|YP_003192193.1| hypothetical protein Dtox_2805 [Desulfotomaculum acetoxidans DSM
771]
gi|257779676|gb|ACV63570.1| CBS domain-containing membrane protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 155
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 27/166 (16%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT +E+ V P V++ +L++ I+G PVID+ K+VG++S+ DL+
Sbjct: 5 TVKDIMT--KEVIAVGPDDNVEKVA-----RLLLDHNISGLPVIDEKGKVVGIISEGDLI 57
Query: 144 ---------ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV 194
A+ ++ G +F E + + E++K+++ V DLMT
Sbjct: 58 IQEKEIKAPAMTTLLGG-----VIFLENPNRF--LKELKKIIAVE----VKDLMTRKVYS 106
Query: 195 VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
V + ++ E + R+PV++ +GKL+GIITR +++ A +
Sbjct: 107 VGPEATIAKVTGIMSEKRINRIPVLNDEGKLLGIITRKDIIENAFK 152
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
V D+MT + V N+E ARLLL+ LPV+D GK+VGII+ G+++ +IK
Sbjct: 6 VKDIMTKEVIAVGPDDNVEKVARLLLDHNISGLPVIDEKGKVVGIISEGDLIIQEKEIK 64
>gi|325285030|ref|YP_004260820.1| inosine-5'-monophosphate dehydrogenase [Cellulophaga lytica DSM
7489]
gi|324320484|gb|ADY27949.1| inosine-5'-monophosphate dehydrogenase [Cellulophaga lytica DSM
7489]
Length = 490
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 33/145 (22%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
++ P T + V A + E I G P++D++ KL+G+V++ DL
Sbjct: 98 IIDPVTLPLNSVVRDAKANMKEYSIGGIPIVDEEGKLIGIVTNRDLR------------- 144
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRR 215
K N + + ++MT +V V E T+L A +L E K +
Sbjct: 145 -------------------FEKNNDRPISEVMTSKNLVTVSEGTSLAQAEDILQENKIEK 185
Query: 216 LPVVDADGKLVGIITRGNVVRAALQ 240
LPVVD D KLVG+IT ++ + L+
Sbjct: 186 LPVVDEDNKLVGLITFRDITKLTLK 210
>gi|443476949|ref|ZP_21066828.1| Cl- channel voltage-gated family protein [Pseudanabaena biceps PCC
7429]
gi|443018010|gb|ELS32338.1| Cl- channel voltage-gated family protein [Pseudanabaena biceps PCC
7429]
Length = 623
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 19/134 (14%)
Query: 105 DEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 164
E V ++ R GFPV+ DD +VG+++ DL+ F E +
Sbjct: 451 SEMLVTEVMQSFARSRHRGFPVMSDD-HVVGIITQMDLVK--------------FQEQNI 495
Query: 165 TWKTFNE-VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 223
K +E + K +S+ N K VG +MT P+ V L LL K RLPV+D
Sbjct: 496 LSKNISENISKNISE-NIK-VGQIMTKNPITVSPEERLSQVLYLLSYYKLSRLPVIDRY- 552
Query: 224 KLVGIITRGNVVRA 237
KLVGIITR +++RA
Sbjct: 553 KLVGIITRSDILRA 566
>gi|357414752|ref|YP_004926488.1| hypothetical protein Sfla_5576 [Streptomyces flavogriseus ATCC
33331]
gi|320012121|gb|ADW06971.1| CBS domain containing membrane protein [Streptomyces flavogriseus
ATCC 33331]
Length = 209
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
+ V D MT P +A +++L +++ PV+ + +++G+VS+ DL
Sbjct: 6 HIVSDLMTHT-------PVAVGSQASYKEIVQLLNRWKVSALPVLAGEGRVIGVVSEADL 58
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
L ++ R D P T +K DLM+ + V L
Sbjct: 59 LPKEA----RRPDEGAAPANAPTDA---------AKAGAVRAEDLMSSPAITVHADAPLA 105
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+AAR++ + +RLPVVD G L GII+RG++++ L+
Sbjct: 106 EAARIMARRRVKRLPVVDGGGLLEGIISRGDLLKVFLR 143
>gi|167949411|ref|ZP_02536485.1| hypothetical protein Epers_24153 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 208
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 40 RPGCRVFSVLATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYT--VGDFMTTKEELHV 97
R C V++ + + R + + G N+ A +++ V D MT
Sbjct: 15 RVCCGVYAAYLKVGNTI----RIAYGLSHGETRENNQAYEEELFSMLVRDIMTNA----- 65
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
P T +A + + ++ R +G PV++D K+ G+V++ D+L D
Sbjct: 66 --PKTVSPDAKLLEVVSLMCLFRFSGLPVVED-GKVKGIVAEKDVLHRMFPGLEDFKDGM 122
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
+ P+ DS + +V L V D+MT + V ++ AA +++ K+RR+P
Sbjct: 123 VAPDYDSMLTQYKDVVTL-------KVADVMTSRVITVDPDMHILKAATVMIRHKFRRIP 175
Query: 218 VVDADGKLVGIITRGNVVRAALQIKHATEM 247
V + DG+L+G+++ G++ +A Q ++ M
Sbjct: 176 VAE-DGELLGMLSLGDIHKAIFQYNISSNM 204
>gi|302392563|ref|YP_003828383.1| signal transduction protein with CBS domains [Acetohalobium
arabaticum DSM 5501]
gi|302204640|gb|ADL13318.1| putative signal transduction protein with CBS domains
[Acetohalobium arabaticum DSM 5501]
Length = 306
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 35/156 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
T+ D MTT ++ + P + A EI+ ++I+G P++D + +L+G++S D+
Sbjct: 17 TINDIMTT--DVITLHPDNKL-----KNAKEIMRLRKISGIPIVDQNKRLLGIISIDDI- 68
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
I G E KL +K N M DL+T V + ++ D
Sbjct: 69 ----IQGL-------------------EYNKLDNKINSLMSTDLIT----VNNQNNSIGD 101
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
+ K+ RLPV+D + KLVGIIT G++ R L
Sbjct: 102 VLFKFKKYKFGRLPVIDNNNKLVGIITPGDITRKLL 137
>gi|225011281|ref|ZP_03701738.1| putative signal transduction protein with CBS domains
[Flavobacteria bacterium MS024-3C]
gi|225004591|gb|EEG42556.1| putative signal transduction protein with CBS domains
[Flavobacteria bacterium MS024-3C]
Length = 156
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 31/157 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MTT L PT ++ E +E + I+G PV++D +LVG+VS+ D
Sbjct: 23 VSDYMTT--SLITFSPTQSILEV-----MECFAKYPISGGPVLNDKKELVGIVSEAD--C 73
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ IS S R N P +D K V M+ + + ++ DA
Sbjct: 74 MKQISES-RYFN--LPILD------------------KSVASFMSKEVETIDASASIFDA 112
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
A + RRLPV+ DGKLVG I+R ++V AAL++
Sbjct: 113 ATIFHSNSRRRLPVLK-DGKLVGQISRKDIVIAALKL 148
>gi|116748379|ref|YP_845066.1| hypothetical protein Sfum_0935 [Syntrophobacter fumaroxidans MPOB]
gi|116697443|gb|ABK16631.1| CBS domain containing membrane protein [Syntrophobacter
fumaroxidans MPOB]
Length = 225
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
E+L + PV+D++ +LVG+V+D D+ S P S + NE
Sbjct: 25 ELLAKSSFRHLPVVDEENRLVGIVTDRDI-------------RSAMP---SVFLDENETL 68
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
K + + D+MT PV V LEDA L+ + PVVD +GKL G+++ +
Sbjct: 69 KERERLAQMKIKDIMTKNPVTVNPANTLEDAILLMQRMRVGAFPVVDREGKLRGMLSIRD 128
Query: 234 VVRAALQIKHATEMG 248
+VRA + + E G
Sbjct: 129 LVRAFVNVLGLEEPG 143
>gi|411006638|ref|ZP_11382967.1| hypothetical protein SgloC_27880 [Streptomyces globisporus C-1027]
Length = 225
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 18/130 (13%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
+ E ++ PV+D + +L+GLVS+ DLL RA + P+++ +
Sbjct: 29 LFAEHDVSAVPVVDPERRLLGLVSEADLL---------RA-TAELPDLEGRPAGV----R 74
Query: 175 LLSKTNG----KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
LLS+ G + LMT V + NL + AR + +RLPV D G+LVGII+
Sbjct: 75 LLSQERGLPAAETAAQLMTSPAVTAQPNWNLVETARTMHRKGVKRLPVTDETGRLVGIIS 134
Query: 231 RGNVVRAALQ 240
R +++R L+
Sbjct: 135 RSDLLRPFLR 144
>gi|90425521|ref|YP_533891.1| CBS domain-containing protein [Rhodopseudomonas palustris BisB18]
gi|90107535|gb|ABD89572.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
BisB18]
Length = 141
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 20/116 (17%)
Query: 122 TGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNG 181
+PV ++D +++GLV+ YD L + A M P D +L+++T
Sbjct: 39 NAYPV-EEDGEVIGLVTKYDFLKCFAF-----APIHMVPHYD----------ELMNRT-- 80
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
VGD+MTP + V L +L+++ + R +PVVD D KL+GII+R +++ A
Sbjct: 81 --VGDVMTPDFIYVHPEIKLTRVLQLMIDHQTRSIPVVDNDRKLMGIISREDIMHA 134
>gi|355571671|ref|ZP_09042899.1| putative signal transduction protein with CBS domains [Methanolinea
tarda NOBI-1]
gi|354825304|gb|EHF09534.1| putative signal transduction protein with CBS domains [Methanolinea
tarda NOBI-1]
Length = 157
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR-ADNS 157
P T A + A +L E+ I G PV+D D +LVG++++ D+L L +GR +D+
Sbjct: 10 NPVTVSAGATIREAAALLRERNIGGLPVMDGD-RLVGMITESDILRLLE---TGRISDDL 65
Query: 158 MFPE----VDSTWKTFNEVQKL---LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 210
P ++ + F +K L+ K V +M+ V + E ++E+AA L+L
Sbjct: 66 WLPSPLEVIEVPIREFINWEKTRHALTAIGEKEVRTVMSHPVVTIGEDADIEEAASLMLS 125
Query: 211 TKYRRLPVVDADGKLVGIITRGNVVRA 237
K RLPV+ + LVGI+ R +++R
Sbjct: 126 KKIARLPVMRGN-TLVGIVARSDIIRG 151
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+V D+MT PV V + +AA LL E LPV+D D +LVG+IT +++R
Sbjct: 2 LVRDVMTKNPVTVSAGATIREAAALLRERNIGGLPVMDGD-RLVGMITESDILR 54
>gi|73668035|ref|YP_304050.1| hypothetical protein Mbar_A0488 [Methanosarcina barkeri str.
Fusaro]
gi|72395197|gb|AAZ69470.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 302
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 35/123 (28%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
L+IL K I+G PV+ D K+VG+V+ +LL PE E
Sbjct: 46 LKILKNKHISGVPVLKDS-KVVGVVTRTNLLQ--------------NPE---------EE 81
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
Q L LMT P+ + ++L+ AARLLLE RRLPVVD DGKLVG++T
Sbjct: 82 QLAL----------LMTRGPITISSGSDLQTAARLLLEHHIRRLPVVD-DGKLVGLVTVA 130
Query: 233 NVV 235
+++
Sbjct: 131 DII 133
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 88/178 (49%), Gaps = 16/178 (8%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTVDEAFV---------PTALEILVEKRITGFPVIDDDW 131
G+ TV D + T ++++ P E V P A I+ + PV+D +
Sbjct: 125 GLVTVADIIGTIADMNIDIPIKDYVEKEVVAIYSETPLPVAARIMELAGVKAVPVLDSNL 184
Query: 132 KLVGLVSDYDLLALDSISGSGR-ADNSMFPEVDS-TWKTFNEVQKLLSKTNG----KMVG 185
+L+G++SD D++A I S +D S + D+ TW++ + + + ++G
Sbjct: 185 ELIGIISDRDVIAASIIEDSVEMSDMSAGQDDDAWTWESMRDTMSIYYSVSRIKVPNLIG 244
Query: 186 -DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
D+M P+ T++ D AR + + ++P+++++ KL G++ ++++ ++++
Sbjct: 245 SDIMIREPITATYITSVSDCARKMKRNRIDQVPIINSNRKLQGLLRDHDLLKPLIELE 302
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 36/172 (20%)
Query: 81 GVYTVGDFMTTKEE-----LHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVG 135
GV T + + EE L P T + + TA +L+E I PV+ DD KLVG
Sbjct: 67 GVVTRTNLLQNPEEEQLALLMTRGPITISSGSDLQTAARLLLEHHIRRLPVV-DDGKLVG 125
Query: 136 LVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV 195
LV+ D++ G+ N P D K EV + S+ TP PV
Sbjct: 126 LVTVADII------GTIADMNIDIPIKDYVEK---EVVAIYSE----------TPLPV-- 164
Query: 196 RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEM 247
AAR++ + +PV+D++ +L+GII+ +V+ A++ I+ + EM
Sbjct: 165 --------AARIMELAGVKAVPVLDSNLELIGIISDRDVIAASI-IEDSVEM 207
>gi|398787640|ref|ZP_10549995.1| putative CBS domain-containing protein [Streptomyces auratus
AGR0001]
gi|396992803|gb|EJJ03896.1| putative CBS domain-containing protein [Streptomyces auratus
AGR0001]
Length = 231
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 17/151 (11%)
Query: 96 HVVKPTTTVDEAFVPTA------LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 149
H+V+ T A V A +E + +++ PV+ + ++VG+VS+ DLL +
Sbjct: 6 HLVRDVMTTTVAAVDRAARFKEIIETMERWQVSALPVLAAEGRVVGVVSEADLLPKEEFR 65
Query: 150 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 209
S P+ + ++V++ + T G+LMT + VR L AAR++
Sbjct: 66 ESD-------PDRLEQLRRVDDVRRAEAVT----AGELMTSPALTVRADATLSQAARVMA 114
Query: 210 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+RLPVVDA G L GI++R ++++ L+
Sbjct: 115 RESVKRLPVVDAHGVLSGIVSRADLLKVFLR 145
>gi|448509403|ref|ZP_21615700.1| peptidase M50 [Halorubrum distributum JCM 9100]
gi|448525289|ref|ZP_21619605.1| peptidase M50 [Halorubrum distributum JCM 10118]
gi|445696652|gb|ELZ48736.1| peptidase M50 [Halorubrum distributum JCM 9100]
gi|445699831|gb|ELZ51850.1| peptidase M50 [Halorubrum distributum JCM 10118]
Length = 394
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 35/154 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT +++LH V T+V + + + E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDIMTPRDDLHTVSEDTSVADL-----MGRMFEERHTGYPVLDGD-ELVGMVTLEDA- 301
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ EV++ + + M DL+ P +
Sbjct: 302 -----------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALT 333
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
A + + E RLPVVDADG+LVG+I+R +++ A
Sbjct: 334 ALQTMQEHGVGRLPVVDADGELVGLISRSDLMTA 367
>gi|453054062|gb|EMF01518.1| hypothetical protein H340_05761 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 226
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
+VG+ MT+ E H T D + +L +R++G PV+D D K++G+VS+ DLL
Sbjct: 5 SVGEIMTS-EVAHARADTPHRD------LVTLLRLRRVSGVPVVDHDDKVIGVVSEADLL 57
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
L + G+G +P + + ++ + TPA V V D
Sbjct: 58 RLRT-DGTGAGHRGRWPGLPPLVPVPRRLGAGAARAPVTAAALMSTPA-VTVHPYQRAAD 115
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 244
AAR++ RLPVVD + +L+GI+TR +++R ++ A
Sbjct: 116 AARVMDRHHVNRLPVVDEEDRLIGIVTRHDLLRVFVRTDEA 156
>gi|197122932|ref|YP_002134883.1| hypothetical protein AnaeK_2529 [Anaeromyxobacter sp. K]
gi|220917724|ref|YP_002493028.1| hypothetical protein A2cp1_2625 [Anaeromyxobacter dehalogenans
2CP-1]
gi|196172781|gb|ACG73754.1| CBS domain containing protein [Anaeromyxobacter sp. K]
gi|219955578|gb|ACL65962.1| CBS domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 146
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 34/160 (21%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYD 141
+ +V DFMT +L V+ + D A + L++ I PV+ + KLVGL++ D
Sbjct: 1 MISVADFMT--RDLVTVRESD--DLALAESLLKL---GGIRHLPVVRE-RKLVGLLTQRD 52
Query: 142 LLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
LL R+ + P + V ++MT PV VR T L
Sbjct: 53 LL---------RSGQAGAP-----------------AARDRAVSEVMTREPVAVRPGTGL 86
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
AARL+LE K+ LPV + DG LVGI+T + VR A +
Sbjct: 87 AHAARLMLERKFGCLPVCEDDGLLVGIVTEADFVRFAADV 126
>gi|146303620|ref|YP_001190936.1| signal transduction protein [Metallosphaera sedula DSM 5348]
gi|145701870|gb|ABP95012.1| putative signal transduction protein with CBS domains
[Metallosphaera sedula DSM 5348]
Length = 279
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 31/156 (19%)
Query: 75 SAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLV 134
SA + +Y +G +T V P T ++ A+ I+V + PV++ + V
Sbjct: 61 SACTQADLYKMG--VTPASGYMTVNPMTVAEDQDALEAITIMVTRNFGSLPVVNASRRPV 118
Query: 135 GLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV 194
G+V++ D L MF ++D + V +TP
Sbjct: 119 GMVTERDFLL-------------MFQDLDPMFS----------------VSGFVTPRVNT 149
Query: 195 VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
V T LE A R++L +RRLPV D DGK+VG++T
Sbjct: 150 VFRDTLLEQAVRMMLRRGFRRLPVTDEDGKVVGMVT 185
>gi|138896350|ref|YP_001126803.1| acetoin dehydrogenase [Geobacillus thermodenitrificans NG80-2]
gi|196249976|ref|ZP_03148671.1| CBS domain containing membrane protein [Geobacillus sp. G11MC16]
gi|134267863|gb|ABO68058.1| Acetoin dehydrogenase [Geobacillus thermodenitrificans NG80-2]
gi|196210490|gb|EDY05254.1| CBS domain containing membrane protein [Geobacillus sp. G11MC16]
Length = 214
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 27/153 (17%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
++ T T+ EA L++L RI PVID++ L+GLV+D DL D S
Sbjct: 14 LRATNTIAEA-----LQLLRHHRIRHLPVIDEEGHLIGLVTDRDL-----------RDAS 57
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
P + + ++QK +S M D++ P+ +E+ A L E + LP
Sbjct: 58 --PSIFHLHQHLEDLQKPVSTI---MKTDIIVGHPL-----DFVEEVAALFYEHRIGCLP 107
Query: 218 VVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+V+ GKLVGIIT +++ +Q+ A + G+Q
Sbjct: 108 IVNG-GKLVGIITETDLLHTLIQLTGAHQPGSQ 139
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
+V +M + + +R T + +A +LL + R LPV+D +G L+G++T ++ A+ I
Sbjct: 2 IVEQVMKTSVITLRATNTIAEALQLLRHHRIRHLPVIDEEGHLIGLVTDRDLRDASPSIF 61
Query: 243 HATE 246
H +
Sbjct: 62 HLHQ 65
>gi|421277076|ref|ZP_15727896.1| CBS domain pair family protein [Streptococcus mitis SPAR10]
gi|395876357|gb|EJG87433.1| CBS domain pair family protein [Streptococcus mitis SPAR10]
Length = 218
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTV-----AHAADLMREQGLHRLPVIEND-KLVGLVTEGTI-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA
Sbjct: 53 ---------AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
L+L+ K LPVVD +G+L G+IT +V A L+I E G
Sbjct: 98 TYLMLKNKIGILPVVD-NGQLYGVITDRDVFSAFLEIAGYGEDG 140
>gi|384085576|ref|ZP_09996751.1| CBS domain-containing membrane protein [Acidithiobacillus
thiooxidans ATCC 19377]
Length = 151
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 148
MTT +E+ P+T ++ V +IL++ PV+ L+G++ + DL+
Sbjct: 1 MTTAQEIMTRAPSTVQEDDSVKNVGKILLQTGHHSIPVVSASGHLIGMIGERDLI----- 55
Query: 149 SGSGRADN--SMFPEVDST--WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ R + +M +D +E ++ L K G L T V N +
Sbjct: 56 -DANREVHLPTMLTILDGLIPLGGMHEYEEELRKVTAVTAGQLATTKVVTAGPDENTDAV 114
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
A LL + LPVVD DGKL+GIITR ++++ L+
Sbjct: 115 AEKLLRKEVHALPVVDTDGKLLGIITRSDILQHLLK 150
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
++MT AP V+E ++++ ++LL+T + +PVV A G L+G+I +++ A ++
Sbjct: 6 EIMTRAPSTVQEDDSVKNVGKILLQTGHHSIPVVSASGHLIGMIGERDLIDANREVH 62
>gi|386844835|ref|YP_006249893.1| hypothetical protein SHJG_8756 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374105136|gb|AEY94020.1| hypothetical protein SHJG_8756 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451798125|gb|AGF68174.1| hypothetical protein SHJGH_8512 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 214
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
+ ++ E+ ++ PV+ + +++G+VS+ DLL + G F +
Sbjct: 18 VRVMDERCVSAVPVVSGEGRVIGVVSEADLLPKEEFRGR-------------ELTRFERI 64
Query: 173 QKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
Q+ L+K G ++M+ V VR L AAR + +RLPVVD +L G+++
Sbjct: 65 QRRSDLTKAEGMTAEEVMSTPAVTVRPDDTLAQAARRMAVHHVKRLPVVDDADRLRGVVS 124
Query: 231 RGNVVRAALQ 240
RG++++ L+
Sbjct: 125 RGDLLKVFLR 134
>gi|150401222|ref|YP_001324988.1| hypothetical protein Maeo_0793 [Methanococcus aeolicus Nankai-3]
gi|150013925|gb|ABR56376.1| protein of unknown function DUF39 [Methanococcus aeolicus Nankai-3]
Length = 511
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 43/67 (64%)
Query: 178 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
K K+VGD+++ P++ + ++ +A+++L+E LP+VD + LVGIIT ++ RA
Sbjct: 384 KAQAKLVGDIISKPPILANQNISINEASKILIENGINHLPIVDENKNLVGIITSWDIARA 443
Query: 238 ALQIKHA 244
Q K++
Sbjct: 444 VAQNKNS 450
>gi|86157756|ref|YP_464541.1| signal transduction protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774267|gb|ABC81104.1| putative signal transduction protein with CBS domains
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 146
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 34/160 (21%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYD 141
+ +V DFMT +L V+ + D A + L++ I PV+ + KLVGL++ D
Sbjct: 1 MISVADFMT--RDLVTVRESD--DLALAESLLKL---GGIRHLPVVRE-RKLVGLLTQRD 52
Query: 142 LLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
LL R+ + P + V ++MT PV VR T L
Sbjct: 53 LL---------RSGQAGAP-----------------AARDRAVSEVMTREPVAVRPGTGL 86
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
AARL+LE K+ LPV + DG LVGI+T + VR A +
Sbjct: 87 AHAARLMLERKFGCLPVCEDDGLLVGIVTEADFVRFAADV 126
>gi|405983162|ref|ZP_11041472.1| drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS
transporter [Slackia piriformis YIT 12062]
gi|404389170|gb|EJZ84247.1| drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS
transporter [Slackia piriformis YIT 12062]
Length = 650
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 32/179 (17%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVK--PTTTVDEAFVPTALEILVEKRITGFPVIDDD 130
A ++ PS+G M ++E +V+ P T +A V A+E E+ ++G PV+D+
Sbjct: 484 AAASKPSAG-------MVSEELADIVEAIPYTLPADASVAFAMEQFAERNVSGMPVVDEH 536
Query: 131 WKLVGLVSDYDL---------LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNG 181
+ VG +SD D+ L +++ S AD S F + +++LLS
Sbjct: 537 GRGVGYLSDGDIIRYLADKHPLFMNTYSLIALADGSTFDD---------RLRELLSLPVK 587
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+ D + P L+DA LL + K +++P+V +G +VG + R ++R A++
Sbjct: 588 TVATDKLIALP----YDATLQDACTLLAQHKLKKVPIVR-NGAIVGTVNRSAIIRYAME 641
>gi|392964369|ref|ZP_10329790.1| inosine-5'-monophosphate dehydrogenase [Fibrisoma limi BUZ 3]
gi|387847264|emb|CCH51834.1| inosine-5'-monophosphate dehydrogenase [Fibrisoma limi BUZ 3]
Length = 490
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 33/141 (23%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
++ P T + A + A +I+ E +I G PV+D D KLVG++++ DL
Sbjct: 98 IIDPITLAETATLADAHKIMREFKIGGIPVVDADNKLVGILTNRDL-------------- 143
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRR 215
Q LS+ V D+MT A ++ RE LE+A +L + + +
Sbjct: 144 --------------RFQTDLSQP----VTDIMTKANLITAREGLTLEEAESILQQYRIEK 185
Query: 216 LPVVDADGKLVGIITRGNVVR 236
LP+V+ KLVG+IT ++++
Sbjct: 186 LPIVNEHYKLVGLITYKDILK 206
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 188 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
M P+ + ET L DA +++ E K +PVVDAD KLVGI+T
Sbjct: 97 MIIDPITLAETATLADAHKIMREFKIGGIPVVDADNKLVGILT 139
>gi|403234640|ref|ZP_10913226.1| hypothetical protein B1040_02530 [Bacillus sp. 10403023]
Length = 150
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 14/151 (9%)
Query: 96 HVVKP--TTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 153
H++K T D V T ++ + I+G P+ID+ ++G +SD D++
Sbjct: 5 HIMKQDVITVKDSDTVKTVIQKFITHGISGLPIIDNHHHIIGYISDGDIMRYIGKHREIM 64
Query: 154 ADNSMFPEVDSTWKTFNE-VQKLLSKTNGKMVGDLMTPAPVVVRETT---NLEDAARLLL 209
+ + V + E QKLL ++MT A V + + ++E+ A +L
Sbjct: 65 INTFNYIAVVKDQDDYEERTQKLLEL-------NVMTVAKTSVLKISYNEDVENIAAILG 117
Query: 210 ETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+ ++LPV + DGKLVGII+RG+V+R + +
Sbjct: 118 KKHIKKLPV-ERDGKLVGIISRGDVIRESFK 147
>gi|284047406|ref|YP_003397745.1| hypothetical protein Acfer_0020 [Acidaminococcus fermentans DSM
20731]
gi|283951627|gb|ADB46430.1| CBS domain containing membrane protein [Acidaminococcus fermentans
DSM 20731]
Length = 222
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MT VVK TT E + E+++ + PV+D D L G+V+D D
Sbjct: 3 VKDLMT-----KVVKVVTT--EQSLLEIRELMLNNNLRRIPVVDGDGHLKGIVTDGD--- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+S + +D S ++ + +L K K DLMT A + V+ +E A
Sbjct: 53 ---VSRATPSDASTLDRYEANY--------ILGKLKAK---DLMTKAVITVKAEDGVETA 98
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
A L+ + K LPVVDA K+VGII+ +V +A
Sbjct: 99 AYLMYKFKIGALPVVDATNKVVGIISDTDVFKA 131
>gi|87121679|ref|ZP_01077566.1| CBS domain protein [Marinomonas sp. MED121]
gi|86162930|gb|EAQ64208.1| CBS domain protein [Marinomonas sp. MED121]
Length = 148
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 33/161 (20%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYD 141
V TV D M T T + A + A +I+ +K I P+IDDD K +G+++ +
Sbjct: 7 VQTVSDLMVTN-------LVTLAETASLADAKKIMQDKNIRNLPIIDDDGKCIGMLTQRE 59
Query: 142 LLA----LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 197
L L S G+G E+Q +SK M D++T + +
Sbjct: 60 YLKHAFYLVSQFGTGMLSKK-------------EMQTPVSKA---MNTDMLT-----IEQ 98
Query: 198 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
T+L+ AA +E KY LPVVD G+LVGI+T + V+ A
Sbjct: 99 DTHLDTAAEFFVENKYGCLPVVDQ-GRLVGILTPIDFVKLA 138
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
V DLM V + ET +L DA +++ + R LP++D DGK +G++T+ ++ A +
Sbjct: 10 VSDLMVTNLVTLAETASLADAKKIMQDKNIRNLPIIDDDGKCIGMLTQREYLKHAFYL 67
>gi|260060968|ref|YP_003194048.1| CBS domain-containing protein [Robiginitalea biformata HTCC2501]
gi|88785100|gb|EAR16269.1| CBS domain protein [Robiginitalea biformata HTCC2501]
Length = 172
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 46/196 (23%)
Query: 61 RSSAVFASGTLTANSAA-----------PSSGVYT----VGDFMTTKEELHVVKPTTTVD 105
+ + +F + NS A PS Y V D+MT L +P ++
Sbjct: 2 KENTIFKNNLTKYNSMAIKSFQGRRAKDPSKKEYDAPILVSDYMT--RNLVTFRPDQSIL 59
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
E +E RI+G PV+DD+ LVG+VS+ D + IS S
Sbjct: 60 EV-----MEAFTRHRISGGPVLDDNGFLVGIVSEAD--CMKQISES-------------- 98
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
+ FN Q +L K+ V MT + ++ DAA + + RRLPV+ DG L
Sbjct: 99 -RYFN--QPILDKS----VERFMTKEVETIPHDMSIFDAAGVFHKNNRRRLPVM-KDGLL 150
Query: 226 VGIITRGNVVRAALQI 241
+G I+R ++V AAL++
Sbjct: 151 IGQISRKDIVVAALKL 166
>gi|227505286|ref|ZP_03935335.1| IMP dehydrogenase [Corynebacterium striatum ATCC 6940]
gi|227198119|gb|EEI78167.1| IMP dehydrogenase [Corynebacterium striatum ATCC 6940]
Length = 506
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 33/141 (23%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
V P T + + E+ RI+G PV+D + LVG+ ++ D+
Sbjct: 106 VTDPVTATPDMTIQEVDELCARFRISGLPVVDANGTLVGICTNRDM-------------- 151
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRR 215
P+ G+ V ++MTP P+VV +E E+A LL K +
Sbjct: 152 RFEPDF------------------GRKVSEIMTPMPLVVAKEGVAKEEALALLSSNKVEK 193
Query: 216 LPVVDADGKLVGIITRGNVVR 236
LP+VD D KLVG+IT + V+
Sbjct: 194 LPIVDDDNKLVGLITVKDFVK 214
>gi|120601585|ref|YP_965985.1| hypothetical protein Dvul_0535 [Desulfovibrio vulgaris DP4]
gi|120561814|gb|ABM27558.1| CBS domain containing protein [Desulfovibrio vulgaris DP4]
Length = 256
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A +++ E PV+D + KL+G+VSD D+ A S +D +E
Sbjct: 52 ASKLMKENGFRRLPVLDGNGKLIGIVSDRDI---------KEASPSKATTLD-----MHE 97
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+ LLS+ V D+MT P+ V+ +E A L++E +PVVD +G+LVGIIT
Sbjct: 98 LYYLLSEIK---VKDIMTRDPICVQPDETVERVALLMIEKHIGGMPVVDEEGQLVGIITD 154
Query: 232 GNVVRAALQIKHATEMGAQ 250
++ + + I G Q
Sbjct: 155 SDIFKVLIAITGVRSGGVQ 173
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
++ + MT + V T++ A++L+ E +RRLPV+D +GKL+GI++ ++ A+
Sbjct: 31 LIREWMTRNVITVTPDTSMMKASKLMKENGFRRLPVLDGNGKLIGIVSDRDIKEAS 86
>gi|340782050|ref|YP_004748657.1| CBS domain containing membrane protein [Acidithiobacillus caldus
SM-1]
gi|340556203|gb|AEK57957.1| CBS domain containing membrane protein [Acidithiobacillus caldus
SM-1]
Length = 161
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 75 SAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLV 134
+AAP + + T+E +HV + V + L+E PV+D D ++V
Sbjct: 2 TAAPETAAPKTAATIMTREVVHVAEGDD------VQVVAKRLLESGHHSLPVLDQDGRVV 55
Query: 135 GLVSDYDLL-ALDSISGSGRAD--NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPA 191
G++ + DL+ A I +S+ P S W+ + E L K L TP
Sbjct: 56 GMIGERDLIDAHRQIHLPTVLSLLDSVIP--ISGWREYEEE---LRKATAVTALQLATPK 110
Query: 192 PVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
P V ++E A +L+ LPVVD G L+GI++R +++RA +Q
Sbjct: 111 PEVAHLGDSVESLADRILKRNLHALPVVDDGGHLLGIVSRSDILRALIQ 159
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
K +MT V V E +++ A+ LLE+ + LPV+D DG++VG+I +++ A QI
Sbjct: 11 KTAATIMTREVVHVAEGDDVQVVAKRLLESGHHSLPVLDQDGRVVGMIGERDLIDAHRQI 70
Query: 242 K 242
Sbjct: 71 H 71
>gi|436840678|ref|YP_007325056.1| CBS domain containing membrane protein [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432169584|emb|CCO22955.1| CBS domain containing membrane protein [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 225
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 18/150 (12%)
Query: 101 TTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 160
T T D + + A +++ + I+ P++DDD LVG++SD D+ A S
Sbjct: 13 TLTHDRSMMKAA-KLMKDNAISRLPIVDDDGVLVGIISDRDI---------KEASPSKAT 62
Query: 161 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 220
+D +E+ LLS+ V D+M+ + V +E AA ++ E K +PVVD
Sbjct: 63 TLD-----MHELYYLLSEIK---VKDIMSRKVITVSIEETVEKAAVVMDENKIGGIPVVD 114
Query: 221 ADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+ K VGIIT +V + +QI G Q
Sbjct: 115 TENKCVGIITNTDVFKVLIQITGVMHGGVQ 144
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+V + MT + + ++ AA+L+ + RLP+VD DG LVGII+ ++ A+
Sbjct: 2 LVKNWMTKEVITLTHDRSMMKAAKLMKDNAISRLPIVDDDGVLVGIISDRDIKEAS 57
>gi|219853206|ref|YP_002467638.1| signal transduction protein with CBS domains [Methanosphaerula
palustris E1-9c]
gi|219547465|gb|ACL17915.1| putative signal transduction protein with CBS domains
[Methanosphaerula palustris E1-9c]
Length = 161
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 94 ELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 153
E+ P +A V A + EK + G PV+D +LVG+V+D DLL+L +
Sbjct: 5 EIMTTNPLVIQADAMVSEAARTMREKHVGGLPVLDGT-RLVGMVTDSDLLSL--LKTGDL 61
Query: 154 ADNSMFPE----VDSTWKTFNEVQKL---LSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
+D+ P ++ + F +K L +G V ++M+ + + + + +AA
Sbjct: 62 SDDLWLPSPLEIIEVPIREFINWEKTRGALRDISGMKVREVMSVPAITIDQEAEISEAAA 121
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
++L K RLPV+D LVGI+TR ++V+
Sbjct: 122 VMLREKIVRLPVMDKR-TLVGIVTRSDIVQG 151
>gi|15607007|ref|NP_214389.1| inosine monophosphate dehydrogenase [Aquifex aeolicus VF5]
gi|6016372|sp|O67820.1|IMDH_AQUAE RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH
gi|2984252|gb|AAC07779.1| inosine monophosphate dehydrogenase [Aquifex aeolicus VF5]
Length = 490
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 29/140 (20%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
++ P T + V AL+I+ + +I+G PV+D++ KL+G++++ DL +
Sbjct: 97 IINPVTVKPDTRVKEALDIMAKYKISGVPVVDEERKLIGILTNRDLRFIK---------- 146
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
PE S V + ++K N + AP E L++A + + K +L
Sbjct: 147 ---PEDYS-----KPVSEFMTKEN-------LITAP----EGITLDEAEEIFRKYKIEKL 187
Query: 217 PVVDADGKLVGIITRGNVVR 236
P+VD +GK+ G+IT ++V+
Sbjct: 188 PIVDKEGKIKGLITIKDIVK 207
>gi|344940460|ref|ZP_08779748.1| CBS domain containing membrane protein [Methylobacter tundripaludum
SV96]
gi|344261652|gb|EGW21923.1| CBS domain containing membrane protein [Methylobacter tundripaludum
SV96]
Length = 386
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 81/154 (52%), Gaps = 14/154 (9%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
VV+ T V+EA+ +I+ ++++ PVID +++G+++ D ++S
Sbjct: 246 VVEYGTEVEEAW-----KIMHKQKLKAMPVIDRARRVIGIITWNDFFKFINLSA------ 294
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
+ ++ F +S + VG +MT + V+ E+ ++ D L+ YR++
Sbjct: 295 --YESFQDRFRAFIRRTPDVSTDKPESVGHMMTTSVTVLPESAHIADLISLMSTQGYRQI 352
Query: 217 PVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
P+V+++ +LVG++ + N++ AAL + + + +Q
Sbjct: 353 PIVNSENRLVGMVYQANLI-AALYDEQLSSVASQ 385
>gi|255021198|ref|ZP_05293248.1| CBS domain containing membrane protein [Acidithiobacillus caldus
ATCC 51756]
gi|254969313|gb|EET26825.1| CBS domain containing membrane protein [Acidithiobacillus caldus
ATCC 51756]
Length = 161
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 75 SAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLV 134
+AAP + + T+E +HV + V + L+E PV+D D ++V
Sbjct: 2 TAAPGTAAPKTAATIMTREVVHVAEGDD------VQVVAKRLLESGHHSLPVLDQDGRVV 55
Query: 135 GLVSDYDLLALD---SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPA 191
G++ + DL+ + +S+ P S W+ + E L K L TP
Sbjct: 56 GMIGERDLIDAHRQIHLPTVLSLLDSVIPI--SGWREYEEE---LRKATAVTALQLATPK 110
Query: 192 PVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
P V ++E A +L+ LPVVD G L+GI++R +++RA +Q
Sbjct: 111 PEVAHLGDSVESLADRILKRNLHALPVVDDGGHLLGIVSRSDILRALIQ 159
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 182 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
K +MT V V E +++ A+ LLE+ + LPV+D DG++VG+I +++ A QI
Sbjct: 11 KTAATIMTREVVHVAEGDDVQVVAKRLLESGHHSLPVLDQDGRVVGMIGERDLIDAHRQI 70
Query: 242 K 242
Sbjct: 71 H 71
>gi|16263041|ref|NP_435834.1| hypothetical protein SMa1086 [Sinorhizobium meliloti 1021]
gi|433616399|ref|YP_007193194.1| CBS-domain-containing membrane protein [Sinorhizobium meliloti GR4]
gi|14523696|gb|AAK65246.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|429554646|gb|AGA09595.1| CBS-domain-containing membrane protein [Sinorhizobium meliloti GR4]
Length = 224
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V A ++E +I+G PV DD +LVG++S+ DLL + R D V + +
Sbjct: 20 VSHAARAMLENQISGLPVCDDRGRLVGMLSEGDLLRRAELGLVSRRD---IAGVRAKPEA 76
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
F K + VGD+MT V V E + A L+ +R+PV+ A+ ++VGI
Sbjct: 77 F-------IKGHSWRVGDVMTQPVVTVDEDMPVGRVAELMAAKGIKRIPVMRAE-EMVGI 128
Query: 229 ITRGNVVRA 237
I+R +++RA
Sbjct: 129 ISRSDILRA 137
>gi|57640129|ref|YP_182607.1| inosine 5'-monophosphate dehydrogenase [Thermococcus kodakarensis
KOD1]
gi|57158453|dbj|BAD84383.1| inosine-5'-monophosphate dehydrogenase [Thermococcus kodakarensis
KOD1]
Length = 486
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 41/145 (28%)
Query: 93 EELHVVKPTTTVDEAFVPTALEILVEKR-ITGFPVIDDDWKLVGLVSDYDLLALDSISGS 151
E++ +KP ++D A L+E+ + G PV+DD+ ++VG+++ D+ A
Sbjct: 101 EDVISIKPDESLDYAL------FLMERNGVDGLPVVDDEGRVVGVITKKDIAA------- 147
Query: 152 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
G V ++MT + V ET E+A +++ +
Sbjct: 148 ---------------------------KQGSKVSEVMTGEVITVPETVTAEEAVQIMFDH 180
Query: 212 KYRRLPVVDADGKLVGIITRGNVVR 236
+ RLPVVD +G+LVGIIT ++ +
Sbjct: 181 RIDRLPVVDGEGRLVGIITMSDLAK 205
>gi|357634461|ref|ZP_09132339.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
gi|357583015|gb|EHJ48348.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
Length = 220
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 17/151 (11%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T + A +++ E PVIDD+ +L G+VSD D+ A S
Sbjct: 11 PVTAKPGTSIMKAAKLMKENGFHRLPVIDDNGRLAGIVSDRDI---------KEASPSKA 61
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
+D +E+ LLS+ V D+MT + + +E AA L+L LPVV
Sbjct: 62 TTLD-----MHELYYLLSEIK---VADIMTKKVIFIGPDDTVEKAAVLMLRNNVSGLPVV 113
Query: 220 DADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
D D K+VG+IT ++ + + I G Q
Sbjct: 114 DGDSKVVGVITDSDIFKVLVNITGVLNGGLQ 144
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
++ D M+ +PV + T++ AA+L+ E + RLPV+D +G+L GI++ ++ A+
Sbjct: 2 LIKDWMSKSPVTAKPGTSIMKAAKLMKENGFHRLPVIDDNGRLAGIVSDRDIKEAS 57
>gi|281421756|ref|ZP_06252755.1| inosine-5'-monophosphate dehydrogenase [Prevotella copri DSM 18205]
gi|281404251|gb|EFB34931.1| inosine-5'-monophosphate dehydrogenase [Prevotella copri DSM 18205]
Length = 494
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 31/141 (21%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
+ P T + V AL+++ + I G PV+DD+ LVG+V++ DL R +
Sbjct: 99 IYDPVTIRRGSTVKDALDMMHDYHIGGIPVVDDENHLVGIVTNRDL----------RFER 148
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
M ++D + N V + T+L AA +L E K +L
Sbjct: 149 HMDKKIDEVMTSENLVTTHIQ---------------------TDLVAAAAILQENKIEKL 187
Query: 217 PVVDADGKLVGIITRGNVVRA 237
PVVD++ LVG+IT ++ +A
Sbjct: 188 PVVDSENHLVGLITYKDITKA 208
>gi|335436655|ref|ZP_08559448.1| CBS domain containing protein [Halorhabdus tiamatea SARL4B]
gi|334897618|gb|EGM35749.1| CBS domain containing protein [Halorhabdus tiamatea SARL4B]
Length = 267
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 79/169 (46%), Gaps = 42/169 (24%)
Query: 77 APSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGL 136
A S TVGD+MT E+ V P TV A I TGFPV + G
Sbjct: 2 ASSEESLTVGDYMT--HEVSTVAPEDTV----ADVASRIADSGGHTGFPVCSG-RDVHGF 54
Query: 137 VSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 196
VS DLL AD+ P V +++SK DLM P
Sbjct: 55 VSASDLLLA--------ADD--LP-----------VTEVMSK-------DLMVAHP---- 82
Query: 197 ETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
+L+D AR++L + +RLPV+D DG+LVGII+ +V+R+ QI+ AT
Sbjct: 83 -DMDLDDVARVILRSGIQRLPVLDDDGQLVGIISNADVIRS--QIERAT 128
>gi|322385954|ref|ZP_08059594.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
gi|417922506|ref|ZP_12565994.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
gi|321269937|gb|EFX52857.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
gi|342832603|gb|EGU66898.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
Length = 218
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 26/166 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TT+ A +I+ ++++ PVI++D KLVGLV++
Sbjct: 3 VKDFMTRK--VVYISPDTTI-----AHAADIMRDQKLHRLPVIEND-KLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+I+ + + +T + E+ LL+KT V D+M V + + +LEDA
Sbjct: 50 -GTIAEASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIHDVVTISQYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
L+L+ K LPVVD + ++ GIIT ++ +A L++ E G +
Sbjct: 98 TYLMLKNKIGILPVVDNE-QVYGIITDRDIFKAFLEVSGYGEKGVR 142
>gi|48478187|ref|YP_023893.1| hypothetical protein PTO1115 [Picrophilus torridus DSM 9790]
gi|48430835|gb|AAT43700.1| CBS domain containing protein [Picrophilus torridus DSM 9790]
Length = 281
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 124 FPVIDDDWKLVGLVSDYDLL------ALDSISGSGRADNSMFPEVDSTWKTFNEV-QKLL 176
FPV+D D GLV+D D+ +++ +S +G AD+ E TW V ++
Sbjct: 158 FPVLDRDGNFTGLVTDRDIFDKVKMSSVEMLSQAGIADD----EDPWTWDGIRNVFTYII 213
Query: 177 SKTNGKMVG----DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
K+N K+ ++M PVV L DA +L+++ Y +LPV+D G L G++
Sbjct: 214 EKSNVKIPNIPAREIMVKNPVVTYINARLGDAVKLMMQKNYNQLPVLDGHGNLAGML 270
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
V D+MT P+ + + D R+L++ +PVVD++ K G+ITR ++
Sbjct: 5 VIDIMTHNPIKYSVPSTISDVVRVLIKNNVTGIPVVDSNNKYAGVITRRDI 55
>gi|427702070|ref|YP_007045292.1| contains C-terminal CBS domains [Cyanobium gracile PCC 6307]
gi|427345238|gb|AFY27951.1| putative transcriptional regulator, contains C-terminal CBS domains
[Cyanobium gracile PCC 6307]
Length = 155
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A++++ + I+G PV+D+ LVG +S+ DL+ +S G M + + +
Sbjct: 27 AVQLMSDHHISGLPVLDELGALVGELSEQDLMVRES--GFDAGPYVMLLDAVIYLRNPLD 84
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
K + + G VGD+M P T L AARLL + +RL V+D LVG++TR
Sbjct: 85 WDKQVHQVLGSTVGDVMGSKPHSCPAATTLPAAARLLHDRGTQRLFVLDDQQALVGVLTR 144
Query: 232 GNVVRA 237
G+VVRA
Sbjct: 145 GDVVRA 150
>gi|78357121|ref|YP_388570.1| hypothetical protein [Desulfovibrio alaskensis G20]
gi|78219526|gb|ABB38875.1| CBS domain containing membrane protein [Desulfovibrio alaskensis
G20]
Length = 142
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 25/165 (15%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYD 141
+ VGD MTT EL + T T+ TA ++ RI P++D+ + +GL++ D
Sbjct: 1 MLNVGDLMTT--ELFTLLETDTL-----KTARSLMQLARIRHIPIVDEHGRFIGLLTHRD 53
Query: 142 LLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
+L +IS +NS+ E+DS G V ++M V L
Sbjct: 54 ILEA-TISRFAEVENSVQDEIDS----------------GIPVSEIMRTDVRRVPPDMRL 96
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
DAA +L KY LPVV++ G LVGI+T + ++ + + A E
Sbjct: 97 RDAAEMLFRHKYGCLPVVES-GILVGIVTEADFLKLTISLLDAVE 140
>gi|386724649|ref|YP_006190975.1| hypothetical protein B2K_21315 [Paenibacillus mucilaginosus K02]
gi|384091774|gb|AFH63210.1| hypothetical protein B2K_21315 [Paenibacillus mucilaginosus K02]
Length = 152
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 76/138 (55%), Gaps = 15/138 (10%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
V + + + +E RI+G PV++ K+VG +SD D++ GR ++ + V S + T
Sbjct: 21 VRSVIRMFLEHRISGVPVVNGRKKIVGYISDGDIMEY-----IGRHEDRV---VGSLFFT 72
Query: 169 F----NE--VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 222
F +E + +S+ V D+ T + V+ +E+ A +L + + ++LP V+
Sbjct: 73 FVFRGDEFGFDERISRILDLPVMDIATKKVITVQAEEPMENIAAILAQRQIKKLP-VEQH 131
Query: 223 GKLVGIITRGNVVRAALQ 240
G+L GII+RG+V+R + +
Sbjct: 132 GELAGIISRGDVIRHSFK 149
>gi|372209898|ref|ZP_09497700.1| signal transduction protein with CBS domains [Flavobacteriaceae
bacterium S85]
Length = 150
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 29/158 (18%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+M + +L P V EA ++ILV I+G V+D++ L+G++S+ D
Sbjct: 22 VSDYMVPRSKLITFSPKLKVVEA-----MQILVSNDISGASVVDENDHLLGMISEGD--C 74
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ I+ S + P D T V + M P + N+ D
Sbjct: 75 MKKIANSRYYN---IPLHDQT------------------VEEYMEPIVETIEGDNNIFDV 113
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
A + ++ R PV++ D K++G I+R ++++AAL+IK
Sbjct: 114 AHMFCTSRRNRFPVMEGD-KVIGQISRKDILKAALEIK 150
>gi|429199472|ref|ZP_19191224.1| CBS domain protein [Streptomyces ipomoeae 91-03]
gi|428664795|gb|EKX64066.1| CBS domain protein [Streptomyces ipomoeae 91-03]
Length = 286
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 116 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 175
L ++++ PV+D D ++G+VS+ DLLA ++ P + L
Sbjct: 105 LGREQVSALPVVDADDHVIGVVSESDLLAKAAVMAE--------PHRHGPVGKLRQ-HHL 155
Query: 176 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
K+ G LMT PV V + DAA + +RLPV D G+LVG+++R +++
Sbjct: 156 YEKSRGDTAATLMTFPPVTVHPAQRVADAAWTAAHARLKRLPVTDHHGRLVGVVSRRDLL 215
Query: 236 RAALQ 240
RA ++
Sbjct: 216 RALIR 220
>gi|291440953|ref|ZP_06580343.1| CBS domain-containing protein [Streptomyces ghanaensis ATCC 14672]
gi|291343848|gb|EFE70804.1| CBS domain-containing protein [Streptomyces ghanaensis ATCC 14672]
Length = 219
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 121 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 180
++ PV++D ++VG+VS+ DLL + F + D +T L K
Sbjct: 34 VSALPVLEDGDRVVGVVSEADLLPKEE-----------FRDSDPDRRTQRRRLPDLLKAG 82
Query: 181 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+LMT V VR L DAA L+ + +RLPVVD G L G+++R +++ L+
Sbjct: 83 ALTAEELMTSPAVTVRAGVTLSDAAGLMTRHRVKRLPVVDGRGALEGVVSRADLLEVFLR 142
>gi|87303510|ref|ZP_01086293.1| CBS protein [Synechococcus sp. WH 5701]
gi|87281923|gb|EAQ73886.1| CBS protein [Synechococcus sp. WH 5701]
Length = 144
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
V PTT + EA ++++ + I+G PV+D+ L+ +S+ DL+ + SG
Sbjct: 8 VTPTTPLQEA-----VKLMSDHHISGLPVLDEQGALIAELSEQDLMVRE--SGFDAGPYV 60
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
M + + + K + + G VGD+M+ P L AA+LL + +RL
Sbjct: 61 MLLDAVIYLRNPLDWDKQVHQVLGNTVGDVMSRHPHSCSAEVTLAAAAKLLHDRSTQRLF 120
Query: 218 VVDADGKLVGIITRGNVVRA 237
V + + +VG++TRG+VVRA
Sbjct: 121 VREGE-TVVGVLTRGDVVRA 139
>gi|347735918|ref|ZP_08868687.1| hypothetical protein AZA_88447 [Azospirillum amazonense Y2]
gi|346920740|gb|EGY01722.1| hypothetical protein AZA_88447 [Azospirillum amazonense Y2]
Length = 272
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 23/141 (16%)
Query: 112 ALEILVEKRITGFPVIDDD-------WKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 164
AL ++V RI+G PV++DD ++VG++++ DL+ RA+ EV
Sbjct: 46 ALRLMVRNRISGLPVVEDDVAAEGGGCRVVGVLTEGDLMR--------RAETGT--EVHD 95
Query: 165 TW-----KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
W T + SK +G+ V ++MT + V ++ A L+ K +RLPV+
Sbjct: 96 RWWQRMFTTPGDQADQYSKMHGRRVAEVMTRDVLTVDVDDDIATAVALMDGRKVKRLPVL 155
Query: 220 DADGKLVGIITRGNVVRAALQ 240
A G L G+I+R +VVRA L
Sbjct: 156 -AHGHLAGVISRADVVRALLH 175
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD-------GKLVGIITRGNVVR 236
V +MTP + VR T L DA RL++ + LPVV+ D ++VG++T G+++R
Sbjct: 26 VRQIMTPGVLTVRPDTPLVDALRLMVRNRISGLPVVEDDVAAEGGGCRVVGVLTEGDLMR 85
Query: 237 AA 238
A
Sbjct: 86 RA 87
>gi|260062737|ref|YP_003195817.1| CBS domain-containing protein [Robiginitalea biformata HTCC2501]
gi|88784305|gb|EAR15475.1| CBS domain protein [Robiginitalea biformata HTCC2501]
Length = 153
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 31/158 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MT L P V+E +++L+ +I+G PV+++D +LVG++S+ D +
Sbjct: 22 VRDYMT--RNLITFHPDQHVEEV-----IDLLIRHKISGGPVVNEDRELVGILSEGDCIK 74
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
S DS + Q +S MV D+ T + N+ DA
Sbjct: 75 HIS---------------DSRYYNMPPEQNRVSNC---MVRDVET-----IDGNLNIFDA 111
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
A+ LE K RR P+V+ +GKL G I++ ++++A + ++
Sbjct: 112 AKKFLEAKRRRFPIVE-NGKLAGQISQKDILKATVALR 148
>gi|405981317|ref|ZP_11039644.1| inosine-5'-monophosphate dehydrogenase [Actinomyces neuii BVS029A5]
gi|404392241|gb|EJZ87301.1| inosine-5'-monophosphate dehydrogenase [Actinomyces neuii BVS029A5]
Length = 501
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 37/141 (26%)
Query: 98 VKPTTTVDEAFVPTALEILV-EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
V PT T+DE L+ L R++G PV+D+D L+G++++ DL + S
Sbjct: 101 VHPTATIDE------LDKLCGHYRVSGLPVVDEDDTLLGIITNRDLRFIPS--------- 145
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET-TNLEDAARLLLETKYRR 215
S W V + MTP P++ + + E+A +LL + + +
Sbjct: 146 -------SKWSQMT-------------VQEAMTPMPLITGKVGISREEAKQLLAQHRIEK 185
Query: 216 LPVVDADGKLVGIITRGNVVR 236
LP++D DG L G+IT + V+
Sbjct: 186 LPILDEDGHLAGLITVKDFVK 206
>gi|270208642|ref|YP_003329413.1| hypothetical protein pSmeSM11ap115 [Sinorhizobium meliloti]
gi|76880916|gb|ABA56086.1| conserved hypothetical protein [Sinorhizobium meliloti]
Length = 224
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 23/135 (17%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSISGSGRADNSMFPEVDST 165
V A ++E +I+G PV DD +LVG++S+ DLL L S+S
Sbjct: 20 VRHAARTMLENQISGLPVCDDRGRLVGILSEGDLLRRAELGSVS---------------- 63
Query: 166 WKTFNEVQ---KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 222
W+ V+ + K + VGDLMT V V E + A L+ +R PV+ A+
Sbjct: 64 WRDIAAVRTKPEAFIKGHSWRVGDLMTQPVVTVDEGMPVGRVAELMAAKGIKRTPVMRAE 123
Query: 223 GKLVGIITRGNVVRA 237
++VGI++R +++RA
Sbjct: 124 -EMVGIVSRSDILRA 137
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
D+M + + + AAR +LE + LPV D G+LVGI++ G+++R A
Sbjct: 5 DIMKKKVLSISPDHGVRHAARTMLENQISGLPVCDDRGRLVGILSEGDLLRRA 57
>gi|451981772|ref|ZP_21930117.1| CBS domain containing membrane protein [Nitrospina gracilis 3/211]
gi|451760982|emb|CCQ91382.1| CBS domain containing membrane protein [Nitrospina gracilis 3/211]
Length = 150
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLA----LDSISGSGRADNSMFPEVDSTWKTFN 170
+ +E R+ GFPV+DDD L+G+V++ DL+ L + D ++ E D +
Sbjct: 27 LFLEHRVNGFPVVDDDSVLIGVVTEKDLIEQNKNLHIPTVIALFDAVIYLESDEKF---- 82
Query: 171 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
+K + + G V D+ + V T++ + A L+ LPVV+ GKLVG+I
Sbjct: 83 --EKEVKRFTGTRVEDIFQQNVLTVEPDTDMNEVATLMANHDIHTLPVVEG-GKLVGVIG 139
Query: 231 RGNVVRA 237
+ +V++
Sbjct: 140 KVDVIKC 146
>gi|299068305|emb|CBJ39527.1| conserved protein of unknown function
(cystathionine-beta-synthase-CBS domain) [Ralstonia
solanacearum CMR15]
Length = 378
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
VP AL +L + PVIDDD +L+G+V+ DL R + W T
Sbjct: 254 VPHALRLLQRHGVKALPVIDDDRRLIGIVTRADLAGTTPRVPRQRLRD---------WFT 304
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ V +M P + +R + D + + +PVVDA G+L GI
Sbjct: 305 IGAMTP-------PRVRGVMNPRVLTIRADAPMADLVPMFASAGHHHIPVVDAHGRLAGI 357
Query: 229 ITRGNVVRA 237
+T+ +V+ A
Sbjct: 358 LTQADVIHA 366
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 173 QKLLSKTNGKM-VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
Q+ ++T + D+MTP+ V T++ A RLL + LPV+D D +L+GI+TR
Sbjct: 225 QQAYARTFHTLTCADIMTPSVVTASAATSVPHALRLLQRHGVKALPVIDDDRRLIGIVTR 284
Query: 232 GNV 234
++
Sbjct: 285 ADL 287
>gi|159905062|ref|YP_001548724.1| signal transduction protein [Methanococcus maripaludis C6]
gi|159886555|gb|ABX01492.1| putative signal transduction protein with CBS domains
[Methanococcus maripaludis C6]
Length = 153
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P T + + A+ I E +I+G PV++ + KLVGL+S+ D++ +++ + +
Sbjct: 10 RPITLNKDDNIEKAISIFRENKISGAPVVEGE-KLVGLLSESDIIK--ALTSHDERFSLV 66
Query: 159 FPE----VDSTWKTFNEVQKLLSKTNGKM---VGDLMTPAPVVVRETTNLEDAARLLLET 211
P ++ KT ++++ + + V + M + V T + +AA ++++
Sbjct: 67 LPSPFDLIELPLKTAIKIEEFRGDMDNALKTEVFEAMAEKVITVSSETPITEAAEIMVKN 126
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRAAL 239
K +RLPVV+ + KLVGI+TRG+++ A +
Sbjct: 127 KIKRLPVVEGE-KLVGIVTRGDLIEAMI 153
>gi|316932763|ref|YP_004107745.1| putative signal transduction protein [Rhodopseudomonas palustris
DX-1]
gi|315600477|gb|ADU43012.1| putative signal transduction protein with CBS domains
[Rhodopseudomonas palustris DX-1]
Length = 338
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 86 GDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 145
D MTT + V+P T V E L+ I+ PV+D +G+VS+ DL+
Sbjct: 4 ADVMTTA--IVTVQPDTPVH-----AIAETLLRHGISAVPVVDGHGAPLGIVSEGDLMPR 56
Query: 146 DSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 205
D + R D + ++ S + + K++ + D+M V V ET L D A
Sbjct: 57 DDTAREARHD--WWLQILSEGEAVHPDYLRFLKSDTRTARDVMVGPVVTVEETAALADVA 114
Query: 206 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 243
+L+E + +R+PV+ A G++VGI++R ++++ H
Sbjct: 115 DVLVEKRIKRVPVLRA-GRIVGIVSRADLLKTMTGTNH 151
>gi|242279278|ref|YP_002991407.1| hypothetical protein Desal_1806 [Desulfovibrio salexigens DSM 2638]
gi|242122172|gb|ACS79868.1| CBS domain containing membrane protein [Desulfovibrio salexigens
DSM 2638]
Length = 145
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 17/128 (13%)
Query: 119 KRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSK 178
+RI P+++D+ + +GLV+ D+L +IS D + E+DS
Sbjct: 31 QRIRHIPIVNDEREFIGLVTHRDILRA-TISQLADIDPATQGEIDS-------------- 75
Query: 179 TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
G VG++M + E T+L++AA LLL+ KY PVV+ L+GI+T + ++
Sbjct: 76 --GIPVGEIMRTDIKTISEDTSLKEAAVLLLDHKYGCFPVVNEKNGLIGILTEADFLKLT 133
Query: 239 LQIKHATE 246
+ + A E
Sbjct: 134 ISLMEALE 141
>gi|21226927|ref|NP_632849.1| hypothetical protein MM_0825 [Methanosarcina mazei Go1]
gi|452209408|ref|YP_007489522.1| hypothetical protein MmTuc01_0846 [Methanosarcina mazei Tuc01]
gi|20905236|gb|AAM30521.1| conserved protein [Methanosarcina mazei Go1]
gi|452099310|gb|AGF96250.1| hypothetical protein MmTuc01_0846 [Methanosarcina mazei Tuc01]
Length = 283
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 64/125 (51%), Gaps = 35/125 (28%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
L+IL K I+G PV+ D K+VG+V+ +LL PE E
Sbjct: 28 LKILKNKHISGVPVLKDS-KVVGIVTRTNLLQ--------------NPE---------EE 63
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
Q L LMT P+ + ++L+ AARLLL+ RRLPVVD DGKLVG++T
Sbjct: 64 QLAL----------LMTRDPITISPGSDLQSAARLLLQHGIRRLPVVD-DGKLVGLVTVA 112
Query: 233 NVVRA 237
+VV A
Sbjct: 113 DVVGA 117
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTVDEAFV---------PTALEILVEKRITGFPVIDDDW 131
G+ TV D + ++++ P E V P I+ + PV+D
Sbjct: 107 GLVTVADVVGAIADMNIDTPIKDYVEKEVVAIFSETPLPVVARIMELACVKAVPVLDAAL 166
Query: 132 KLVGLVSDYDLLALDSISGSGR-ADNSMFPEVDS-TWKTFNEVQKLLSKTN----GKMVG 185
+L+G++SD D+++ I S +D S + D+ TW++ + + + ++G
Sbjct: 167 ELIGIISDRDIISASVIEDSVEMSDMSAGQDDDAWTWESMRDTMSIYYSVSRIKVPNLIG 226
Query: 186 -DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
D+M P+ ++ D AR + + ++P+++++ KL G++ ++++ ++
Sbjct: 227 SDIMIREPITATYIASISDCARKMKRNRIDQIPIINSNRKLQGLLRDHDLLKPLIE 282
>gi|297197552|ref|ZP_06914949.1| CBS domain-containing protein [Streptomyces sviceus ATCC 29083]
gi|197715576|gb|EDY59610.1| CBS domain-containing protein [Streptomyces sviceus ATCC 29083]
Length = 223
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 68/130 (52%), Gaps = 15/130 (11%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
+ ++ + +++ PV++ + ++VGLVS+ DLL + DS + ++
Sbjct: 18 VRLMQDWKVSALPVLEGEGRVVGLVSEADLLPKEEFR-------------DSDPDRYTQL 64
Query: 173 QKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
++L L+K +LMT + R L AAR + ++ +RLPVV+ G L GI++
Sbjct: 65 RRLSDLAKAGAVTAEELMTSPALTTRPDATLAQAARTMAHSRVKRLPVVNELGMLEGIVS 124
Query: 231 RGNVVRAALQ 240
R ++++ L+
Sbjct: 125 RADLLKVFLR 134
>gi|332291925|ref|YP_004430534.1| signal transduction protein with CBS domains [Krokinobacter sp.
4H-3-7-5]
gi|332170011|gb|AEE19266.1| putative signal transduction protein with CBS domains
[Krokinobacter sp. 4H-3-7-5]
Length = 154
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 31/161 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+M+ K L P +V E + L++ +I+G PV++++ +L+G++S+ D
Sbjct: 23 VSDYMSRK--LITFSPDQSVLEV-----MNNLIKHKISGGPVVNENNELLGIISEGD--C 73
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ IS S + M K N + + +G M N+ DA
Sbjct: 74 MKQISESRYYNMPM-----DNMKVSNHMVTNVDTIDGNM----------------NVFDA 112
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
A LE+K+RR P+V+ +GKLVG I++ +V++AAL + T
Sbjct: 113 ANKFLESKHRRFPIVE-NGKLVGQISQKDVLKAALALNGQT 152
>gi|75675216|ref|YP_317637.1| hypothetical protein Nwi_1023 [Nitrobacter winogradskyi Nb-255]
gi|74420086|gb|ABA04285.1| IMP dehydrogenase [Nitrobacter winogradskyi Nb-255]
Length = 243
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 15/131 (11%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF-- 169
A ++++E I+G PV+DD +L+G+VS+ D + I G P + W F
Sbjct: 23 AAKLMLESHISGLPVVDDAGRLLGIVSESDFMRRSEIGTHG-------PRI--RWLDFLM 73
Query: 170 --NEVQKLLSKTNGKMVGDLMTPAPV-VVRETTNLEDAARLLLETKYRRLPVVDADGKLV 226
+ + +G+ V +MT + E LE+ RL+ +RLPV+ D LV
Sbjct: 74 GTEKAAIDFVREHGRKVSAIMTRETLFTATEDMPLEELVRLMERQNIKRLPVIRGD-LLV 132
Query: 227 GIITRGNVVRA 237
GI+TR +++RA
Sbjct: 133 GIVTRADLLRA 143
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+MT + V+ T + +AA+L+LE+ LPVVD G+L+GI++ + +R
Sbjct: 6 IMTHKLITVKADTPIVEAAKLMLESHISGLPVVDDAGRLLGIVSESDFMR 55
>gi|407478610|ref|YP_006792487.1| hypothetical protein Eab7_2799 [Exiguobacterium antarcticum B7]
gi|407062689|gb|AFS71879.1| CBS domain containing membrane protein [Exiguobacterium antarcticum
B7]
Length = 151
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 7/134 (5%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV-DSTWK 167
+ T +E + I+G PV++D ++VG +SD D++ + D ++ +V K
Sbjct: 20 IRTVVERFITSGISGVPVVNDQQEVVGYISDGDIMRVIGKHKDIIVDTFLYVDVIKGDDK 79
Query: 168 TFNE-VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 226
+ E V+ +L++ V D+ V T +E+ A L + ++LP++ DGKLV
Sbjct: 80 NYEERVRHILTRP----VMDMARRKVVTANVETEMEEIAATLGAKRIKKLPIL-KDGKLV 134
Query: 227 GIITRGNVVRAALQ 240
GII+RG+V+R + +
Sbjct: 135 GIISRGDVIRHSFK 148
>gi|329938549|ref|ZP_08287974.1| hypothetical protein SGM_3466 [Streptomyces griseoaurantiacus M045]
gi|329302522|gb|EGG46413.1| hypothetical protein SGM_3466 [Streptomyces griseoaurantiacus M045]
Length = 253
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 31/158 (19%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
+TVG MT ++ + TT E + +L RI G PV+D+D K+VG++S DL
Sbjct: 4 HTVGQVMTG--DVVQARRTTPFKEL-----VRLLDRHRIGGLPVVDEDDKVVGVLSGTDL 56
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
+ + SGRA DLM+ V V ++
Sbjct: 57 VRAQA-GRSGRA-----------------------PAGAVTAQDLMSTPAVTVHPEQSVP 92
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
DAARL+ RLPV+D + +L+GI TR +++R L+
Sbjct: 93 DAARLMERRGVERLPVIDEEDRLIGIATRRDLLRVFLR 130
>gi|319789126|ref|YP_004150759.1| inosine-5'-monophosphate dehydrogenase [Thermovibrio ammonificans
HB-1]
gi|317113628|gb|ADU96118.1| inosine-5'-monophosphate dehydrogenase [Thermovibrio ammonificans
HB-1]
Length = 488
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 31/144 (21%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D + E +VKP T E + A ++ + +I+G PV++D+ KLVG++++ D+ +
Sbjct: 85 DRVKRSESGMIVKPVTVKPEQTIAEAEALMKKYKISGLPVVNDEGKLVGIITNRDIRFVK 144
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
S + ++++K N + V PV T LE+A
Sbjct: 145 DFS--------------------KRIAEVMTKENLRTV-------PV----GTTLEEAKE 173
Query: 207 LLLETKYRRLPVVDADGKLVGIIT 230
+L + K +LPVVD +G L G+IT
Sbjct: 174 ILHKYKIEKLPVVDENGYLKGLIT 197
>gi|116254732|ref|YP_770568.1| hypothetical protein pRL100290 [Rhizobium leguminosarum bv. viciae
3841]
gi|115259380|emb|CAK10515.1| putative CBS domain protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 160
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 17/142 (11%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
EA V A ++ +T PV+D D + +GLVS+ D++ R S F +
Sbjct: 19 EATVAEAARCMLIHHVTAVPVVDADNRPLGLVSEGDVM---------RHFGSQFQSERAQ 69
Query: 166 W-KTFNEVQKLLS------KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
W + E + L + N + V ++M A + E +L + A L+L+ +R+P+
Sbjct: 70 WLRMLAEGETLAPEFLAEIRLNQQHVREIMHTAIISAGEEASLAELADLMLKHGIKRVPI 129
Query: 219 VDADGKLVGIITRGNVVRAALQ 240
+ DG LVGI++R +VVRA ++
Sbjct: 130 L-RDGVLVGIVSRADVVRAVVE 150
>gi|448451851|ref|ZP_21593023.1| peptidase M50 [Halorubrum litoreum JCM 13561]
gi|448483974|ref|ZP_21605911.1| peptidase M50 [Halorubrum arcis JCM 13916]
gi|445810067|gb|EMA60099.1| peptidase M50 [Halorubrum litoreum JCM 13561]
gi|445820458|gb|EMA70278.1| peptidase M50 [Halorubrum arcis JCM 13916]
Length = 394
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 35/154 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT +++LH V T+V + + + E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDIMTPRDDLHTVSEDTSVADL-----MGRMFEERHTGYPVLDGD-ELVGMVTLEDA- 301
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ EV++ + + M DL+ P +
Sbjct: 302 -----------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALT 333
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
A + + E RLPVVDADG LVG+I+R +++ A
Sbjct: 334 ALQTMQEHGVGRLPVVDADGALVGLISRSDLMTA 367
>gi|333916333|ref|YP_004490065.1| CBS domain-containing membrane protein [Delftia sp. Cs1-4]
gi|333746533|gb|AEF91710.1| CBS domain containing membrane protein [Delftia sp. Cs1-4]
Length = 232
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 26/180 (14%)
Query: 58 ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILV 117
A R AV A + + P + TV D M+ E V P V++A+ +L
Sbjct: 68 APRLRGAVDAYLSTEKGPSQPRQPLQTVADVMS--HEAVTVSPEAGVNDAW-----RVLA 120
Query: 118 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS 177
E + PV+D ++VGL+ D+ LD + G ++ + + NEV
Sbjct: 121 EHGVAQAPVLDAGGRVVGLLLRADMAPLDLLPEPGAIKDA----IALARRPVNEV----- 171
Query: 178 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+++P P V TT+L A +LLET LPV D G L G I+R +++RA
Sbjct: 172 ---------MISPIPTVA-TTTDLRRVAGVLLETGLPGLPVTDEQGLLAGFISRTDILRA 221
>gi|397904553|ref|ZP_10505459.1| Inosine-5'-monophosphate dehydrogenase [Caloramator australicus
RC3]
gi|397162411|emb|CCJ32793.1| Inosine-5'-monophosphate dehydrogenase [Caloramator australicus
RC3]
Length = 143
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 38/164 (23%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMTT + V P T V E +I+ +K + PV+D D K+VG+V+D D++
Sbjct: 3 VKDFMTT--NVAYVTPNTPVVEI-----AKIMKDKNVGSVPVLDGD-KVVGIVTDRDIVL 54
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
D G K NEV L+K D+MT ++ DA
Sbjct: 55 RDIAFG----------------KNPNEV---LAK-------DVMTVGVTTANPNMDIHDA 88
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
AR++ E + RRLPVV+ +G+LVG++ G++ A++ K A + G
Sbjct: 89 ARIMAEKQVRRLPVVE-NGRLVGMLAIGDI---AVESKLADDAG 128
>gi|347731091|ref|ZP_08864196.1| CBS domain pair family protein [Desulfovibrio sp. A2]
gi|347520105|gb|EGY27245.1| CBS domain pair family protein [Desulfovibrio sp. A2]
Length = 142
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 25/162 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
VGD M+T L +K T ++ A ++ RI P++D GL++ D+L+
Sbjct: 4 VGDLMSTG--LFTLKKTDSL-----RAARSLMQLARIRHIPIVDAKGDFQGLLTHRDILS 56
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S F +VD + NE+ +G VG++M V V T L DA
Sbjct: 57 ---------ATISRFADVDEAVQ--NEID------SGIPVGEIMRTDVVCVHPGTLLRDA 99
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
A LLL KY LPV + D +LVGI+T + ++ + + A E
Sbjct: 100 AELLLHHKYGCLPVTE-DNRLVGIVTEADFLKLTISLLDAVE 140
>gi|90422168|ref|YP_530538.1| hypothetical protein RPC_0646 [Rhodopseudomonas palustris BisB18]
gi|90104182|gb|ABD86219.1| CBS [Rhodopseudomonas palustris BisB18]
Length = 332
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
D MTT ++ VV P ++ E IL+ R++ PV+D D +G+VS++DL+
Sbjct: 5 DVMTT--DVSVVGPNSSSAEV-----ARILLATRVSALPVVDHDGAPIGVVSEWDLVGQH 57
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
+ + + + + + +Q + TN + ++M + V ETT + + AR
Sbjct: 58 ATDRVAKRERWLSHLAEGQPLAADFLQS-VDPTN-RTTAEIMHQPVIAVPETTPIAEVAR 115
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
L+ E + +R+ V D +LVG+++R ++VRA L
Sbjct: 116 LIAEHRIKRVFVTRGD-RLVGVVSRIDLVRAHL 147
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
D+MT VV ++ + AR+LL T+ LPVVD DG +G+++ ++V +HAT
Sbjct: 5 DVMTTDVSVVGPNSSSAEVARILLATRVSALPVVDHDGAPIGVVSEWDLVG-----QHAT 59
Query: 246 EMGAQ 250
+ A+
Sbjct: 60 DRVAK 64
>gi|227502740|ref|ZP_03932789.1| IMP dehydrogenase [Corynebacterium accolens ATCC 49725]
gi|227076470|gb|EEI14433.1| IMP dehydrogenase [Corynebacterium accolens ATCC 49725]
Length = 506
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 33/142 (23%)
Query: 97 VVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 156
V P T E + + RI+G PV+D D L+G+ ++ D+
Sbjct: 106 VTDPVTARPEMTIGEVDALCARFRISGLPVVDRDGTLLGICTNRDM-------------- 151
Query: 157 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRR 215
P+ D + V D+MT P+VV RE + ++A LL K +
Sbjct: 152 RFEPDFD------------------RKVSDVMTAMPLVVAREGVSKDEALELLSANKVEK 193
Query: 216 LPVVDADGKLVGIITRGNVVRA 237
LP+VDAD KL+G+IT + V++
Sbjct: 194 LPIVDADNKLIGLITVKDFVKS 215
>gi|329766621|ref|ZP_08258164.1| inosine-5'-monophosphate dehydrogenase [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329136876|gb|EGG41169.1| inosine-5'-monophosphate dehydrogenase [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 477
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 44/170 (25%)
Query: 77 APSSGVYTVGDFMTTKEELHVV------------KPTTTVDEAFVPTALEILVEKRITGF 124
A + G+ + F+T KE+ + V P + V A+ EK I+G
Sbjct: 61 ARAGGIGIIHRFLTIKEQANEVLKVKRSGSVMIENPYAVSSDKTVQDAINYAEEKEISGL 120
Query: 125 PVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 184
V+D + KLVG+V+D DLL E DST +++
Sbjct: 121 LVVDSNSKLVGIVTDRDLLF----------------ETDST----------------RLI 148
Query: 185 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
D+MT V + +L++A ++L + + +LP++D G + G+IT ++
Sbjct: 149 KDVMTKDVVTAKLGVSLDEAKKILHKHRIEKLPIIDDSGFIKGLITSKDI 198
>gi|39934295|ref|NP_946571.1| hypothetical protein RPA1220 [Rhodopseudomonas palustris CGA009]
gi|192289823|ref|YP_001990428.1| signal-transduction protein with CBS domains [Rhodopseudomonas
palustris TIE-1]
gi|39648143|emb|CAE26663.1| CBS domain [Rhodopseudomonas palustris CGA009]
gi|192283572|gb|ACE99952.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris TIE-1]
Length = 338
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 86 GDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 145
D MTT + V+P T V E L++ I+ PV+D +G+VS+ DL+
Sbjct: 4 ADVMTTA--IVTVQPETPVH-----AIAETLLKHGISAVPVVDGAGVPLGIVSEGDLMP- 55
Query: 146 DSISGSGRADNSMFPEVDSTWKTFNEVQKL------LSKTNGKMVGDLMTPAPVVVRETT 199
RAD+ D + +E + + K++ + D+M V V ETT
Sbjct: 56 -------RADSDREARHDWWLQMLSEGEAVHPDYVRFLKSDTRTAKDVMVGPVVTVEETT 108
Query: 200 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 243
L D A LL+E + +R+PVV A G +VGI++R ++++ + H
Sbjct: 109 ALADIADLLVEKRIKRVPVVRA-GHIVGIVSRADLLKTMTGLNH 151
>gi|260435379|ref|ZP_05789349.1| hypothetical protein SH8109_2383 [Synechococcus sp. WH 8109]
gi|260413253|gb|EEX06549.1| hypothetical protein SH8109_2383 [Synechococcus sp. WH 8109]
Length = 157
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT + + V P T + +A ++++ + ++G PV++ + +L+G +++ DL+
Sbjct: 6 TVADVMT--QPVLTVTPDTPLQQA-----VQMISDHHVSGLPVVNVEGRLIGELTEQDLM 58
Query: 144 ALDSISGSG----RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 199
+S +G D+ ++ W +V ++L G V DLM R
Sbjct: 59 VRESGVDAGPYVMLLDSVIYLRNPLNWD--KQVHQVL----GTKVSDLMRKDSHSCRTEL 112
Query: 200 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
L AA L E +RL V+D++ VG+ITRG+VVRA
Sbjct: 113 ALPKAASQLHERGTQRLFVLDSNQCPVGVITRGDVVRA 150
>gi|197119665|ref|YP_002140092.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197089025|gb|ACH40296.1| CBS domain pair-containing protein [Geobacter bemidjiensis Bem]
Length = 216
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 18/143 (12%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
P T + V AL ++ +K+I PV++ KLVG+VSD DL + A
Sbjct: 10 NPITITPDISVTEALRLMGDKKIRRLPVVERTGKLVGIVSDRDLFQASPSPATSLA---- 65
Query: 159 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 218
W E+ LL+K V M + V E T LE+AAR++++ + LPV
Sbjct: 66 ------IW----EIHDLLAKLT---VDKTMATDVITVTEDTPLEEAARVMVDRRIGGLPV 112
Query: 219 VDADGKLVGIITRGNVVRAALQI 241
+ D LVGIIT ++ +A L++
Sbjct: 113 MKGDA-LVGIITESDLFQALLEL 134
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+V D MTP P+ + ++ +A RL+ + K RRLPVV+ GKLVGI++ ++ +A+
Sbjct: 2 LVRDRMTPNPITITPDISVTEALRLMGDKKIRRLPVVERTGKLVGIVSDRDLFQAS 57
>gi|383319115|ref|YP_005379956.1| hypothetical protein Mtc_0673 [Methanocella conradii HZ254]
gi|379320485|gb|AFC99437.1| CBS-domain-containing membrane protein [Methanocella conradii
HZ254]
Length = 261
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 31/159 (19%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
+VG MT E+ V +P +V +A++ ++ +TGFPV+ +++G+++ D+L
Sbjct: 127 SVGSLMT--REVVVCRPEDSVSKAWLN-----MINYGLTGFPVVGPKGEVIGMITREDVL 179
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
G R + E D +T VQK++S TPA + V+E +++
Sbjct: 180 K----RGYARIER----ESDGR-RTPTTVQKIMS-----------TPA-ITVKEDDSVKK 218
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA--ALQ 240
AA++ +E R+PVV DG+L GII R +V+R ALQ
Sbjct: 219 AAKIFMERDIGRVPVV-KDGRLAGIIDRYDVIRTCRALQ 256
>gi|115522828|ref|YP_779739.1| signal-transduction protein [Rhodopseudomonas palustris BisA53]
gi|115516775|gb|ABJ04759.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris BisA53]
Length = 329
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
E L++ I+ PV+DDD +G++S+ DL+ D R D + + ++ Q
Sbjct: 25 ETLLKNGISAVPVLDDDGAPIGIISEGDLMPRDETDRDARRDWWL--------RMLSQGQ 76
Query: 174 K-----LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
L S T+ + ++M V + +L + A LL + +R+P + DGKLVGI
Sbjct: 77 DVSPDYLKSLTDDRSAREVMISPVVTISADADLIEVAELLSSKRIKRVPAM-RDGKLVGI 135
Query: 229 ITRGNVVRAALQ 240
++R ++VRA Q
Sbjct: 136 VSRADLVRAFAQ 147
>gi|421096898|ref|ZP_15557597.1| CBS domain protein [Leptospira borgpetersenii str. 200901122]
gi|410800143|gb|EKS02204.1| CBS domain protein [Leptospira borgpetersenii str. 200901122]
Length = 211
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 25/133 (18%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
+ A +I ++KR PV+D + L G++SD D + WK
Sbjct: 97 ISRAQDIFIQKRFRHVPVLDGENTLCGIISDRDWM---------------------RWK- 134
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
++ + GK +G +M + VR + + A++L E + LPV++ +++GI
Sbjct: 135 ---LEHISEVELGKTIGKIMKTRVLSVRIQAGIGEIAKVLFEERIGCLPVINDSFQVIGI 191
Query: 229 ITRGNVVRAALQI 241
ITR +V+RA L+I
Sbjct: 192 ITRSDVLRAILRI 204
>gi|297560079|ref|YP_003679053.1| hypothetical protein Ndas_1105 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844527|gb|ADH66547.1| CBS domain containing membrane protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 228
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYD 141
++TV D MTT+ + T D + A E+LV ++ PV + + +VG+VSD D
Sbjct: 1 MHTVSDVMTTE------VFSVTGDTGYREIA-EMLVTHGVSALPVTNGEGCVVGVVSDED 53
Query: 142 LLALDSISGSGRADNSMFPEVDSTWKT-FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
LL + +G A P + + + K + +LMT V V +
Sbjct: 54 LLHKEEFTGGDYA-----PPLRARLRARLGSGGSAGDKATARNAAELMTGPAVTVSSDAS 108
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+ AARL+ ++LPVVD DG L+GI++R
Sbjct: 109 VVLAARLMERHGVKQLPVVDGDGHLLGIVSR 139
>gi|421899644|ref|ZP_16330007.1| putative cbs-domain-containing transmembrane protein [Ralstonia
solanacearum MolK2]
gi|206590850|emb|CAQ56462.1| putative cbs-domain-containing transmembrane protein [Ralstonia
solanacearum MolK2]
Length = 288
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
VP AL +L + PV+DD +L+G+V+ DL + RA + W
Sbjct: 164 VPHALRLLQRHGVKSLPVLDDGRRLIGIVTRADL-----TGTAARAPRQRLRD----WFA 214
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ V +MTP + +R + D L + +PVVDA G+L GI
Sbjct: 215 IGAMTP-------PRVSGVMTPRVLTIRADAPMADLVPLFASAGHHHIPVVDAHGRLAGI 267
Query: 229 ITRGNVVRA 237
+T+ +++ A
Sbjct: 268 LTQADIIHA 276
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 173 QKLLSKT-NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
Q+ ++T + D+MTP+ V V T++ A RLL + LPV+D +L+GI+TR
Sbjct: 135 QQAYARTFHALTCADIMTPSVVTVSAATSVPHALRLLQRHGVKSLPVLDDGRRLIGIVTR 194
Query: 232 GNV 234
++
Sbjct: 195 ADL 197
>gi|163751845|ref|ZP_02159060.1| CBS domain protein [Shewanella benthica KT99]
gi|161328261|gb|EDP99423.1| CBS domain protein [Shewanella benthica KT99]
Length = 171
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 32/153 (20%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
+ D+M P T + A+E+ ++ + G PVID++ K++G +S+ D L
Sbjct: 34 IADYMNRH-------PVTFTAHMPIAEAVELFLQNQQIGGPVIDENRKVIGFLSEQDCL- 85
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+++T+ NE N VGD+M P+ V++ ++ D
Sbjct: 86 --------------IKMLEATY--LNE--------NHCDVGDVMHGDPLTVKKEASVLDL 121
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
A+ + + + P+VD + KL+GII R V++A
Sbjct: 122 AQQMTHHQPKIYPIVDDEDKLIGIINRSAVLKA 154
>gi|432331213|ref|YP_007249356.1| putative transcriptional regulator, contains C-terminal CBS domains
[Methanoregula formicicum SMSP]
gi|432137922|gb|AGB02849.1| putative transcriptional regulator, contains C-terminal CBS domains
[Methanoregula formicicum SMSP]
Length = 282
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 42/166 (25%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MT+ + +HV P D L+IL I+G PVI + KLVG+++ DLL
Sbjct: 3 VRDYMTS-DVVHVEIPGNRDD------VLKILKRTGISGVPVIKNK-KLVGIITRKDLL- 53
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
SK +G LMT PV + +++A
Sbjct: 54 --------------------------------SKPEETQLGLLMTAKPVTIGPDMEMKEA 81
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
AR+L+ RRLPVV+ D LVG+++ +V+ A Q+K E+ +
Sbjct: 82 ARILVTKHIRRLPVVE-DNHLVGLLSVADVIHALAQVKCREEIKEK 126
>gi|320159747|ref|YP_004172971.1| hypothetical protein ANT_03370 [Anaerolinea thermophila UNI-1]
gi|319993600|dbj|BAJ62371.1| hypothetical protein ANT_03370 [Anaerolinea thermophila UNI-1]
Length = 427
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 7/131 (5%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
E V A + ++E + PV+D + ++VG+++ DLL G R S+ +D
Sbjct: 137 EMNVRQAWQKMLESGVKAMPVVDSERRVVGILTSEDLLE----RGVIRQRLSVAVRLDEA 192
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
E +LLS + V D+MT + RE +L +A R +++ +R+PVV+A +L
Sbjct: 193 --EIQEELRLLS-ASPLTVKDVMTQPVITAREDEHLGNAVRRMIDKGLKRMPVVNAGNQL 249
Query: 226 VGIITRGNVVR 236
VG+++R +++R
Sbjct: 250 VGMLSRLDILR 260
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 25/184 (13%)
Query: 55 RVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALE 114
R+ LR+ S S TL +++AA V TVG+ M T +L V++ T +D T LE
Sbjct: 255 RLDILRQVSG---SPTLPSSAAAVRGAVRTVGEVMRT--DLPVIRLTERLD-----TLLE 304
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
V+D+ K VG++SD D++ + + R +++
Sbjct: 305 KFAACDSNRLLVVDEQNKPVGVISDSDVVV--RVEAAQRKG------------ILQALRR 350
Query: 175 LLSKTNGKMVG-DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
L S K+ DL +P + V + A + +L + L VVD G L+GI+ R +
Sbjct: 351 LTSPPPLKVTAEDLYSPGVLTVPTDAPIASAVQTMLAEGRKVLAVVDKQGTLLGIVDRQS 410
Query: 234 VVRA 237
++ A
Sbjct: 411 LLEA 414
>gi|309798594|ref|ZP_07692869.1| CBS domain protein [Streptococcus infantis SK1302]
gi|308117830|gb|EFO55231.1| CBS domain protein [Streptococcus infantis SK1302]
Length = 218
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTV-----AHAADLMREQGLHRLPVIEND-KLVGLVTEGTI-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA
Sbjct: 53 ---------AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRNVVTVSGYASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
L+L+ K LPV+D + ++ G+IT +V RA L+I E G
Sbjct: 98 TYLMLKNKIGILPVIDNE-QVYGVITDRDVFRAFLEISGYGEEG 140
>gi|239906791|ref|YP_002953532.1| hypothetical protein DMR_21550 [Desulfovibrio magneticus RS-1]
gi|239796657|dbj|BAH75646.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 152
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 18/129 (13%)
Query: 118 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS 177
E RI P+ID VGLV+ DLLA A S E+D+ +T ++
Sbjct: 30 EARIRHLPIIDGSGAFVGLVTHRDLLA---------ASVSRLAEIDA--QTQEDIYA--- 75
Query: 178 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
G +G++M +V L AA +LL KY LPVV+ GKLVGI+T + +R
Sbjct: 76 ---GIPLGEVMRADVAMVTPDLPLRQAAEVLLTQKYGCLPVVEG-GKLVGILTASDFIRL 131
Query: 238 ALQIKHATE 246
+L++ A E
Sbjct: 132 SLELMDALE 140
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAT 245
DLMT + +R +L A R + E + R LP++D G VG++T +++ A+ +
Sbjct: 6 DLMTEDLIALRHDDSLLSAKRTMEEARIRHLPIIDGSGAFVGLVTHRDLLAAS--VSRLA 63
Query: 246 EMGAQ 250
E+ AQ
Sbjct: 64 EIDAQ 68
>gi|386586288|ref|YP_006082690.1| putative signal transduction protein [Streptococcus suis D12]
gi|353738434|gb|AER19442.1| putative signal transduction protein with CBS domains
[Streptococcus suis D12]
gi|451937306|gb|AGF87609.1| CBS family protein [Streptococcus phage phiD12]
Length = 218
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 26/167 (15%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
+V DFMT K + + P TT+ A +I+ E+ + PVI++D KLVGLV++
Sbjct: 2 SVKDFMTRK--VVYISPDTTI-----AHAADIMREQYLHRLPVIEND-KLVGLVTE---- 49
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
+I+ + + +T + E+ LL+KT V D+M + V +LED
Sbjct: 50 --GTIAEASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIKNVITVSGYASLED 96
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
A L+ + K LPVVD +G+L G+IT ++ A L + E G +
Sbjct: 97 ATYLMYKNKVGILPVVD-NGQLYGVITDRDIFAAFLHVSGYGEEGVR 142
>gi|375090890|ref|ZP_09737197.1| hypothetical protein HMPREF9709_00059 [Helcococcus kunzii ATCC
51366]
gi|374565026|gb|EHR36304.1| hypothetical protein HMPREF9709_00059 [Helcococcus kunzii ATCC
51366]
Length = 150
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 28/154 (18%)
Query: 97 VVKPTTTVDEAF----VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 152
+V P + + F + A+ IL E T PV++ D K GL+S + + G
Sbjct: 17 IVTPVSNISMVFEENNLAHAMLILKESNYTQIPVLNYDKKFTGLISFHHIYKK---LGEK 73
Query: 153 RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
DN F D+ + V D + +V+E LED LL+
Sbjct: 74 LFDN--FDNFDNYY-----------------VKDFIDTHNAIVKEDFKLEDVLNLLIN-- 112
Query: 213 YRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 246
Y + VV DGKLVG+ITR +V++ + H +
Sbjct: 113 YNFINVVSDDGKLVGMITRSSVLKKMNHLSHNID 146
>gi|298674088|ref|YP_003725838.1| hypothetical protein Metev_0111 [Methanohalobium evestigatum
Z-7303]
gi|298287076|gb|ADI73042.1| CBS domain containing protein [Methanohalobium evestigatum Z-7303]
Length = 284
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 69/137 (50%), Gaps = 37/137 (27%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
LEIL +K+++G PVI ++ K+VG+VS +LL +PE E
Sbjct: 28 LEILKDKQVSGVPVIKEN-KVVGIVSRNNLLK--------------YPE---------EE 63
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
Q L LMT PV + ++ AARLLL+ RRLPVVD D +LVG++T
Sbjct: 64 QLAL----------LMTRDPVTISPDVDITVAARLLLDHDVRRLPVVDGD-QLVGLVTIA 112
Query: 233 NVV--RAALQIKHATEM 247
+VV A L I +M
Sbjct: 113 DVVGSMADLNITDQIDM 129
>gi|357636277|ref|ZP_09134152.1| CBS domain protein [Streptococcus macacae NCTC 11558]
gi|357584731|gb|EHJ51934.1| CBS domain protein [Streptococcus macacae NCTC 11558]
Length = 219
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 26/157 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFM+ K + V P TTV A +I+ EKR+ PVI++D KLVGLV++ +
Sbjct: 3 VKDFMSKK--VVYVSPDTTV-----AKATDIMREKRLRRLPVIEND-KLVGLVTEGTI-- 52
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
A S +T + E+ LL+KT + D+M + + + +LEDA
Sbjct: 53 -------AEATPS-----KATSLSIYEMNYLLNKTK---IRDVMIHDVITISKDAHLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
L++ K LPVVD + ++ GIIT ++ +A L++
Sbjct: 98 IYLMMNHKIGVLPVVDEE-QISGIITDKDIFKAFLEV 133
>gi|162451567|ref|YP_001613934.1| hypothetical protein sce3295 [Sorangium cellulosum So ce56]
gi|161162149|emb|CAN93454.1| hypothetical protein sce3295 [Sorangium cellulosum So ce56]
Length = 263
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 16/130 (12%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG--------SGRADNSMFPEVDSTW 166
+LV I+G PV+D K VG+VS D+L G + R+ E+ +
Sbjct: 125 LLVRHEISGMPVVDAAGKPVGMVSRADVLRAADERGDTEESRRVASRSGEVAPLEMSQGF 184
Query: 167 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 226
+ V+ D+MTP V + E+ ++ AA L+ RLPVV DGK+V
Sbjct: 185 HVYEPVRVTAR--------DVMTPVVVQLHESASIRQAASLMAYEGVHRLPVVSDDGKVV 236
Query: 227 GIITRGNVVR 236
GI++ +V+R
Sbjct: 237 GILSSLDVLR 246
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+ ++MT + +R +L+D LL+ + +PVVDA GK VG+++R +V+RAA
Sbjct: 102 LAEIMTKDVICIRTEVSLDDITALLVRHEISGMPVVDAAGKPVGMVSRADVLRAA 156
>gi|120609584|ref|YP_969262.1| hypothetical protein Aave_0890 [Acidovorax citrulli AAC00-1]
gi|120588048|gb|ABM31488.1| CBS domain containing membrane protein [Acidovorax citrulli
AAC00-1]
Length = 383
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 21/160 (13%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDY 140
G GD M+ + P T + A ++ +RI PV+D ++VG+V+
Sbjct: 236 GQLRCGDIMSRE-------PVTAAFGTGLQEAWALMRRRRIKALPVVDRARRIVGIVTTA 288
Query: 141 DLLA---LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 197
D + LD G G ++ V + T EV VG +MT VV E
Sbjct: 289 DFMRQIDLDVHHGIGEQLRALVRRVGAVHSTKPEV-----------VGQIMTRQVRVVSE 337
Query: 198 TTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+ L E + +PV+D + +LVGIIT+ ++VRA
Sbjct: 338 RRPALELVPLFTEDGHHHIPVIDEERRLVGIITQSDLVRA 377
>gi|108803646|ref|YP_643583.1| signal transduction protein [Rubrobacter xylanophilus DSM 9941]
gi|108764889|gb|ABG03771.1| putative signal transduction protein with CBS domains [Rubrobacter
xylanophilus DSM 9941]
Length = 160
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 16/155 (10%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TVGD M H PT ++ V A+ + E I+G PV++D +LVG+V++ DL+
Sbjct: 10 TVGDVM------HADWPTLGPEDT-VERAIRLFAESHISGAPVLEDG-RLVGIVTEGDLI 61
Query: 144 ALDS-ISGSGRAD--NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 200
D+ I G D + P +W+ + E + L K+ G VG++MT V V T
Sbjct: 62 FRDAEIKAPGFLDILGGIIPL--GSWEEYRE-ETL--KSAGVTVGEVMTRDVVTVSPQTP 116
Query: 201 LEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 235
L +AA + + + LPVV+ + L G+I+R +++
Sbjct: 117 LPEAATAMARRRIKLLPVVEGERLLRGVISRMDIL 151
>gi|84616861|emb|CAJ13755.1| conserved hypothetical protein [Desulfococcus multivorans]
Length = 309
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 86 GDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 145
GD M K + T +D A + A++++ I PV+D + KL G+++D DL
Sbjct: 76 GDLMLVKNWMSRRLITVDIDAA-MADAVKLMKTNDIHLLPVLDGE-KLSGIITDRDL--- 130
Query: 146 DSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 205
RA S D+T E+ LLSK V D+MT + + T +E+AA
Sbjct: 131 ------KRASAS-----DATALEMYELIYLLSKIR---VSDIMTRKIITLAPDTTVEEAA 176
Query: 206 RLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+LL+ K PVVD G+L+G+IT+ ++ R + + G Q
Sbjct: 177 EVLLKQKISGAPVVDDAGRLLGVITKSDLFRMLIALTGLPNRGIQ 221
>gi|374317064|ref|YP_005063492.1| hypothetical protein [Sphaerochaeta pleomorpha str. Grapes]
gi|359352708|gb|AEV30482.1| CBS-domain-containing membrane protein [Sphaerochaeta pleomorpha
str. Grapes]
Length = 214
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 18/151 (11%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T + V A ++ +++ PV+D D KLVG++++ D+L S
Sbjct: 11 PVTATPDMSVAEASALMKREKVHRLPVLDKDKKLVGIITEKDILY-----------ASPS 59
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
P +T + +E+ LLSK V LM+ V + + T +E+AAR++++ LPV+
Sbjct: 60 P---ATSLSIHEMAYLLSKLT---VKKLMSKNVVTITKDTTVEEAARMMVDQDLSCLPVM 113
Query: 220 DADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+ D L+GI+++ ++ + L++ A G +
Sbjct: 114 EGDS-LIGIVSKSDMFKILLELFGARHFGVR 143
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 188 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
MT PV ++ +A+ L+ K RLPV+D D KLVGIIT +++ A+
Sbjct: 7 MTRNPVTATPDMSVAEASALMKREKVHRLPVLDKDKKLVGIITEKDILYAS 57
>gi|221632822|ref|YP_002522044.1| IMP dehydrogenase [Thermomicrobium roseum DSM 5159]
gi|221156254|gb|ACM05381.1| IMP dehydrogenase [Thermomicrobium roseum DSM 5159]
Length = 166
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
+ P T+V E ++ E I+G PVID+ +++G+V+++DL+A ++ +
Sbjct: 18 ISPETSVGEI-----ARLMWEHAISGVPVIDEQRRVIGIVTEFDLIAREASFNA----PL 68
Query: 158 MFPEVDSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 214
P +D+ +K T +E Q L K ++M+ + + +E A L+ +
Sbjct: 69 YVPFLDAFFKVPGTGDETQ--LRKILATKAAEIMSSPAITIGPEETIEALATLMYRRRVN 126
Query: 215 RLPVVDADGKLVGIITRGNVV 235
+PVVD +G+L+GI++R +++
Sbjct: 127 PVPVVDEEGRLLGIVSRSDLI 147
>gi|39997108|ref|NP_953059.1| hypothetical protein GSU2010 [Geobacter sulfurreducens PCA]
gi|409912533|ref|YP_006890998.1| hypothetical protein KN400_2032 [Geobacter sulfurreducens KN400]
gi|39983998|gb|AAR35386.1| CBS domain pair-containing protein [Geobacter sulfurreducens PCA]
gi|298506121|gb|ADI84844.1| CBS domain pair-containing protein [Geobacter sulfurreducens KN400]
Length = 144
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 25/157 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
VG +MT P T +A V A+ ++ EK I PV+D + +VG++++ ++A
Sbjct: 4 VGTWMTKN-------PVTIEKDATVIEAVHLMKEKSIRRLPVMDKE-TIVGILTEK-MVA 54
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
S + D TW EV +LSKT+ V + M P P V+ T+L +A
Sbjct: 55 DFRPSKATSLD---------TW----EVHYILSKTS---VTEAMNPKPYKVKPDTDLTEA 98
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
A+LL + K + VVD + +LVGI+T N + A ++I
Sbjct: 99 AQLLHDRKLNGVLVVDDNDRLVGILTVTNALEALIEI 135
>gi|333910621|ref|YP_004484354.1| hypothetical protein [Methanotorris igneus Kol 5]
gi|333751210|gb|AEF96289.1| protein of unknown function DUF39 [Methanotorris igneus Kol 5]
Length = 512
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 45/69 (65%)
Query: 178 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
K++ K+VG++++ P+V +E+A+R+L++ LP+VD G+LVGIIT ++ RA
Sbjct: 384 KSDVKLVGEILSKPPIVAPIGITIEEASRILIKNNINHLPIVDEFGRLVGIITSWDIARA 443
Query: 238 ALQIKHATE 246
Q K + E
Sbjct: 444 IAQNKKSIE 452
>gi|333911650|ref|YP_004485383.1| hypothetical protein [Methanotorris igneus Kol 5]
gi|333752239|gb|AEF97318.1| protein of unknown function DUF39 [Methanotorris igneus Kol 5]
Length = 511
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 45/69 (65%)
Query: 178 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
K++ K+VG++++ P+V +E+A+R+L++ LP+VD G+LVGIIT ++ RA
Sbjct: 384 KSDVKLVGEILSKPPIVAPIGITIEEASRILIKNNINHLPIVDEFGRLVGIITSWDIARA 443
Query: 238 ALQIKHATE 246
Q K + E
Sbjct: 444 IAQNKKSIE 452
>gi|153005297|ref|YP_001379622.1| signal transduction protein [Anaeromyxobacter sp. Fw109-5]
gi|152028870|gb|ABS26638.1| putative signal transduction protein with CBS domains
[Anaeromyxobacter sp. Fw109-5]
Length = 166
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 77/165 (46%), Gaps = 38/165 (23%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEAF-VPTALEILVEKRITGFPVIDDDWKLVGLV 137
S+ + +V DFM+ K TV E+ + A +L I PV+ D +LVGLV
Sbjct: 18 STPMISVADFMS--------KDLVTVGESDDLALAESLLRLSGIRHLPVVKD-GRLVGLV 68
Query: 138 SDYDLLALDSISG-SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 196
+ D+L SG SGR S +T V ++MT VR
Sbjct: 69 TQRDVLR----SGQSGR----------SGARTLA-------------VSEVMTRDLTTVR 101
Query: 197 ETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
T L AARL+LE KY LPV D +G+LVGI+T + VR A +
Sbjct: 102 PATALSQAARLMLERKYGCLPVCDEEGRLVGIVTEADFVRFAADV 146
>gi|91200717|emb|CAJ73769.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 243
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSISGSGRADN 156
P T +DEA+ EI+ E R P++ + K+ G++SD DLL A SG + N
Sbjct: 93 PDTRLDEAW-----EIIREHRFRHLPILTPNKKVAGIISDRDLLREAAQSEASGDKQPVN 147
Query: 157 S---MFPEVDSTWKTFNEVQ-KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 212
+ + E D+ + + + K V D+ + T L + A++L+E
Sbjct: 148 TPAQKWYEADAHYTDAGFYHDNIYTFPKKKTVLDICKTRILTATPDTELREIAKILIEEH 207
Query: 213 YRRLPVVDADGKLVGIITRGNVVR 236
+P+VD + L+GIITR +++R
Sbjct: 208 IGSMPIVDENNHLLGIITRSDILR 231
>gi|435852305|ref|YP_007313891.1| putative transcriptional regulator, contains C-terminal CBS domains
[Methanomethylovorans hollandica DSM 15978]
gi|433662935|gb|AGB50361.1| putative transcriptional regulator, contains C-terminal CBS domains
[Methanomethylovorans hollandica DSM 15978]
Length = 283
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 66/136 (48%), Gaps = 35/136 (25%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
LEIL K+++G PV+ D KLVG+VS +LL PE E
Sbjct: 28 LEILKAKKVSGVPVLKDG-KLVGIVSRSNLL--------------QNPE---------EE 63
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
Q L LMT PV + ++ DAARL+L+ RRLPVV+ DGKL G++T
Sbjct: 64 QLAL----------LMTRDPVSISADKDITDAARLILQHNIRRLPVVE-DGKLQGLLTVA 112
Query: 233 NVVRAALQIKHATEMG 248
++V A + +G
Sbjct: 113 DLVGALADLNLTDHVG 128
>gi|372273001|ref|ZP_09509049.1| hypothetical protein MstaS_18049 [Marinobacterium stanieri S30]
Length = 137
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 23/126 (18%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 171
A+ L E I+G PV+D + LVG++S+ D L RA +T++E
Sbjct: 27 AIRALQEYGISGAPVVDAEGALVGMLSELDCL---------RA---------ILTQTYHE 68
Query: 172 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
+ +G VG M+ + +L +AARL ++ K RR+PVV GKLVG I+R
Sbjct: 69 EEM----GSGGHVGRYMSSPVETIDYGADLTEAARLFIDKKLRRMPVVRG-GKLVGQISR 123
Query: 232 GNVVRA 237
+V+RA
Sbjct: 124 RDVLRA 129
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL-QIK 242
V D M + T L DA R L E PVVDA+G LVG+++ + +RA L Q
Sbjct: 7 VQDYMATNLISFSPETGLFDAIRALQEYGISGAPVVDAEGALVGMLSELDCLRAILTQTY 66
Query: 243 HATEMGA 249
H EMG+
Sbjct: 67 HEEEMGS 73
>gi|315221921|ref|ZP_07863832.1| CBS domain pair protein [Streptococcus anginosus F0211]
gi|421491265|ref|ZP_15938631.1| CBS domain protein [Streptococcus anginosus SK1138]
gi|315188887|gb|EFU22591.1| CBS domain pair protein [Streptococcus anginosus F0211]
gi|400371367|gb|EJP24326.1| CBS domain protein [Streptococcus anginosus SK1138]
Length = 218
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TTV A +I+ E+ + PVI++D +LVGLV++
Sbjct: 3 VKDFMTRK--VVYISPDTTV-----AHAADIMREQGLHRLPVIEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+I+ + + +T + E+ LL+KT K D+M V V + +LEDA
Sbjct: 50 -GTIAEASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
L+L+ K LPVVD + ++ G+IT +V RA L+I E G
Sbjct: 98 TYLMLKNKIGILPVVD-NQQVYGVITDRDVFRAFLEIAGYGEEG 140
>gi|441162550|ref|ZP_20968124.1| putative CBS domain-containing protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440616548|gb|ELQ79684.1| putative CBS domain-containing protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 224
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 120 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL--LS 177
+++ PV++ + ++VG+VS+ DLL + D T +++ L L
Sbjct: 42 KVSALPVVEGEGRVVGVVSEADLLPKEEFR-------------DHTPSRIEQLRVLDALI 88
Query: 178 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
K+ G +LMT V V L AAR + + +R+PVVDA G+L G+++R ++++
Sbjct: 89 KSGGVTADELMTAPAVTVHADATLAQAARTMAWYRIKRMPVVDAVGRLEGVVSRSDLLKV 148
Query: 238 ALQ 240
L+
Sbjct: 149 FLR 151
>gi|170291096|ref|YP_001737912.1| signal transduction protein [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175176|gb|ACB08229.1| putative signal transduction protein with CBS domains [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 161
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 43/58 (74%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
V ++MT P+ +R+ T++++AAR+++E RRL VV+ DG++VGII+ ++++ A I
Sbjct: 85 VSEIMTKDPITIRDNTDIDEAARIMIEKNIRRLIVVNYDGRVVGIISSRDILKVAPHI 142
>gi|33865304|ref|NP_896863.1| IMP dehydrogenase [Synechococcus sp. WH 8102]
gi|33632473|emb|CAE07285.1| similar to IMP dehydrogenase [Synechococcus sp. WH 8102]
Length = 147
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA----DNSMFPEVDSTWK 167
A++++ + I+G PV+DD L+G +S+ D + +S +G D+ ++ W
Sbjct: 17 AVQLISDHHISGLPVVDDAGVLIGELSEQDQMVRESGVDAGPYVMLLDSVIYLRNPLNWD 76
Query: 168 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVG 227
+V ++L G V DLM L AA L + +RL V+D DGK G
Sbjct: 77 --KQVHQVL----GTTVKDLMRKDTHTCSLELGLPKAASQLHDRSTQRLFVLDGDGKPAG 130
Query: 228 IITRGNVVRA 237
+ITRG+V+RA
Sbjct: 131 VITRGDVMRA 140
>gi|239908873|ref|YP_002955615.1| hypothetical protein DMR_42380 [Desulfovibrio magneticus RS-1]
gi|239798740|dbj|BAH77729.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 220
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
++ D M+ PV + TT++ AA+L+ E Y RLPVVD DG+LVGIIT +V A+
Sbjct: 2 LIKDWMSKTPVTAKATTSIMKAAKLMKENGYGRLPVVDDDGRLVGIITDRDVKEAS 57
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 17/151 (11%)
Query: 100 PTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 159
P T + A +++ E PV+DDD +LVG+++D D+ A S
Sbjct: 11 PVTAKATTSIMKAAKLMKENGYGRLPVVDDDGRLVGIITDRDV---------KEASPSKA 61
Query: 160 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 219
+D +E+ LLS+ VGD+MT + V +E AA L+L +PVV
Sbjct: 62 TTLD-----MHELYYLLSEIK---VGDIMTKTVISVSPDDTVEKAAVLMLRHNVGGMPVV 113
Query: 220 DADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
DA G +VG+IT ++ + + I G Q
Sbjct: 114 DAKGLVVGVITDSDIFKVLVSITGVLSGGLQ 144
>gi|115523751|ref|YP_780662.1| hypothetical protein RPE_1733 [Rhodopseudomonas palustris BisA53]
gi|115517698|gb|ABJ05682.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
BisA53]
Length = 129
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 20/124 (16%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
E+ +PV ++D +++GLV+ YD L + A M P D
Sbjct: 19 ELFNRDDYNAYPV-EEDGQVIGLVTKYDYLKCFAF-----APVHMVPHYD---------- 62
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
+L+++T VGD+M+P + V L +L+++ + R +PVVD D KL+GII+R +
Sbjct: 63 ELMNRT----VGDVMSPDFIYVHPEIKLTRVLQLMVDHQTRSIPVVDNDRKLMGIISRED 118
Query: 234 VVRA 237
V+ A
Sbjct: 119 VMHA 122
>gi|443625999|ref|ZP_21110432.1| putative CBS domain-containing protein [Streptomyces
viridochromogenes Tue57]
gi|443340510|gb|ELS54719.1| putative CBS domain-containing protein [Streptomyces
viridochromogenes Tue57]
Length = 226
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 68/130 (52%), Gaps = 15/130 (11%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
++++ + +++ PV++ + ++VG+VS+ DLL + DS + ++
Sbjct: 29 VQLMQDWKVSALPVLEGEGRVVGVVSEADLLPKEEFR-------------DSDPDRYTQL 75
Query: 173 QKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
++L L+K +LMT + R L AAR + K +RLPVV+ G L GI++
Sbjct: 76 RRLSDLAKAGAVTAEELMTSPALTTRPDATLAQAARTMAHAKVKRLPVVNELGMLEGIVS 135
Query: 231 RGNVVRAALQ 240
R ++++ L+
Sbjct: 136 RADLLKVFLR 145
>gi|440699098|ref|ZP_20881403.1| CBS domain protein [Streptomyces turgidiscabies Car8]
gi|440278404|gb|ELP66442.1| CBS domain protein [Streptomyces turgidiscabies Car8]
Length = 240
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 120 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL--LS 177
+++ PV+D + +++G+VS+ DLL + DS + ++ +L L
Sbjct: 36 KVSALPVLDGEERVIGVVSEADLLPKEGFR-------------DSDPDRYTQLHRLSDLI 82
Query: 178 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
K +LMT + V L AAR++ ++ +RLPVVD G L G+++R ++++
Sbjct: 83 KAGAVTAQELMTAPAITVHPDATLARAARVMARSRVKRLPVVDGRGLLKGVVSRSDLLKV 142
Query: 238 ALQ 240
L+
Sbjct: 143 FLR 145
>gi|319939590|ref|ZP_08013949.1| AcuB family protein [Streptococcus anginosus 1_2_62CV]
gi|335032128|ref|ZP_08525535.1| CBS domain protein [Streptococcus anginosus SK52 = DSM 20563]
gi|319811179|gb|EFW07485.1| AcuB family protein [Streptococcus anginosus 1_2_62CV]
gi|333767799|gb|EGL45022.1| CBS domain protein [Streptococcus anginosus SK52 = DSM 20563]
Length = 218
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TTV A +I+ E+ + PVI++D +LVGLV++
Sbjct: 3 VKDFMTRK--VVYISPDTTV-----AHAADIMREQGLHRLPVIEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+I+ + + +T + E+ LL+KT K D+M V V + +LEDA
Sbjct: 50 -GTIAEASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
L+L+ K LPVVD + ++ G+IT +V RA L+I E G
Sbjct: 98 TYLMLKNKIGILPVVD-NQQVYGVITDRDVFRAFLEIAGYGEEG 140
>gi|407004025|gb|EKE20499.1| IMP dehydrogenase [uncultured bacterium]
Length = 151
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 18/145 (12%)
Query: 105 DEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 164
D V +IL ++RI G PV+D D K++G+V++ + A + D ++ +
Sbjct: 16 DHTTVNNVADILTKERIHGVPVVDKDRKVIGIVTETNFFA--------KVDGDLY--LSK 65
Query: 165 TWKTFN-----EVQKLLSKTNGKM---VGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 216
KT +V+ L +K K+ VGD+MT V V +E+ + + + +
Sbjct: 66 FVKTIKKNKLPDVRDLKNKNEIKVETTVGDIMTKNCVTVSPEMKVEELFEVFRKKGFHTI 125
Query: 217 PVVDADGKLVGIITRGNVVRAALQI 241
PVVD +G L GI++ N++ ++++
Sbjct: 126 PVVDKNGILEGIVSLANIIAISVKL 150
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
V D+MT + V + T + + A +L + + +PVVD D K++GI+T N
Sbjct: 3 VKDIMTKDVIFVFDHTTVNNVADILTKERIHGVPVVDKDRKVIGIVTETN 52
>gi|406834873|ref|ZP_11094467.1| hypothetical protein SpalD1_24628 [Schlesneria paludicola DSM
18645]
Length = 180
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 38/154 (24%)
Query: 84 TVGDFMTTKEELHV-VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDL 142
TV D M E+ V V P T DEA LE E V+D+ L+G++ DY+L
Sbjct: 4 TVADLMC---EMPVTVGPECTTDEA-----LEAFYEHETPELYVVDESGFLLGVLPDYEL 55
Query: 143 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 202
L +L ++ G V LM+ + V R +++
Sbjct: 56 LK----------------------------AQLSGESKGACVEQLMSTSVPVCRSSSDAA 87
Query: 203 DAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
AR +++ R+PVV A G+LVG++TR +V+R
Sbjct: 88 GVARAFRDSQCNRMPVVQA-GRLVGVVTRADVLR 120
>gi|302540275|ref|ZP_07292617.1| inosine-5'-monophosphate dehydrogenase [Streptomyces hygroscopicus
ATCC 53653]
gi|302457893|gb|EFL20986.1| inosine-5'-monophosphate dehydrogenase [Streptomyces himastatinicus
ATCC 53653]
Length = 210
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 30/122 (24%)
Query: 115 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 174
+L RI G PV+D+D K+VG+++ DL + G+ A
Sbjct: 89 LLERHRIGGLPVVDEDDKVVGVITGTDLAGAGGVEGAVSA-------------------- 128
Query: 175 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
G M+ V VR + DAAR + + RLPVVD + +L+GI+TR ++
Sbjct: 129 ----------GQRMSRPAVTVRPQDTIVDAARSMARHRVERLPVVDEEDRLIGIVTRRDL 178
Query: 235 VR 236
+R
Sbjct: 179 LR 180
>gi|59712578|ref|YP_205354.1| acetoin utilization AcuB protein [Vibrio fischeri ES114]
gi|197335338|ref|YP_002156799.1| acetoin utilization AcuB protein [Vibrio fischeri MJ11]
gi|423686751|ref|ZP_17661559.1| acetoin utilization AcuB protein [Vibrio fischeri SR5]
gi|59480679|gb|AAW86466.1| acetoin utilization AcuB protein [Vibrio fischeri ES114]
gi|197316828|gb|ACH66275.1| acetoin utilization AcuB protein [Vibrio fischeri MJ11]
gi|371494819|gb|EHN70417.1| acetoin utilization AcuB protein [Vibrio fischeri SR5]
Length = 147
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 27/160 (16%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYD 141
++TV D MTT P T + + A ++ E I P++D D L+GLV+ D
Sbjct: 1 MFTVKDMMTTH-------PHTLLRSHSLEDAKALMDEHCIRHIPIVDTDGALIGLVTQRD 53
Query: 142 LLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 201
LL+ A +S + TF EV L N M ++M+ AP L
Sbjct: 54 LLS---------AQSSCLEK-----PTFEEVSTLDIPLNSIMHENVMSIAPY-----GGL 94
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
++AA + + K LPVV+ GKLVGIIT + V A+ +
Sbjct: 95 KEAALFMQKHKVGCLPVVER-GKLVGIITDSDFVSIAINL 133
>gi|212638309|ref|YP_002314829.1| acetoin utilization protein [Anoxybacillus flavithermus WK1]
gi|212559789|gb|ACJ32844.1| Acetoin utilization protein (CBS, ACT domains) [Anoxybacillus
flavithermus WK1]
Length = 209
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 27/153 (17%)
Query: 98 VKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 157
+KP+ T+ +A L I+ +K I P++DD++++VG+V+D DL D S
Sbjct: 9 LKPSNTIADA-----LNIVKQKNIRHLPIVDDEYRVVGIVTDRDL-----------RDAS 52
Query: 158 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 217
P + + ++QK LS M +++T P+ +E+ A L E + +P
Sbjct: 53 --PSIFHANEHLEDLQKPLSTI---MKTNVITGHPL-----DFVEEVAALFYEHRISCMP 102
Query: 218 VVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+V + KLVGIIT +++ +Q+ A + G+Q
Sbjct: 103 IV-KENKLVGIITESDLLYTLVQLTGAHQPGSQ 134
>gi|154150926|ref|YP_001404544.1| signal transduction protein [Methanoregula boonei 6A8]
gi|153999478|gb|ABS55901.1| putative signal transduction protein with CBS domains
[Methanoregula boonei 6A8]
Length = 282
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 42/163 (25%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MT+ + +HV P D L+IL I+G PV+ + KLVG+++ DLL
Sbjct: 3 VKDYMTS-DVVHVDIPGNRDD------VLKILKRTGISGVPVLKNK-KLVGIITRKDLL- 53
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
K +G LMT P+ + ++ +A
Sbjct: 54 --------------------------------RKPEETQLGLLMTSKPITIGPDADIREA 81
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEM 247
ARLL+ + RRLPVV+ D KL+G+I+ +++ A Q+K E+
Sbjct: 82 ARLLVSHRIRRLPVVE-DNKLIGLISVADLIHAIAQMKIKDEI 123
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 35/163 (21%)
Query: 81 GVYTVGDFMTTKEE-----LHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVG 135
G+ T D + EE L KP T +A + A +LV RI PV++D+ KL+G
Sbjct: 45 GIITRKDLLRKPEETQLGLLMTSKPITIGPDADIREAARLLVSHRIRRLPVVEDN-KLIG 103
Query: 136 LVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV 195
L+S DL+ + K +E++ L + T + D TP P+V
Sbjct: 104 LISVADLI-----------------HAIAQMKIKDEIKDLYTSTTFALWED--TPLPLV- 143
Query: 196 RETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
R++ + +P++++D L GII+ +++R +
Sbjct: 144 ---------GRVMEISGVDAIPILNSDSVLQGIISERDLIRHS 177
>gi|357414758|ref|YP_004926494.1| transport-associated protein [Streptomyces flavogriseus ATCC 33331]
gi|320012127|gb|ADW06977.1| transport-associated protein [Streptomyces flavogriseus ATCC 33331]
Length = 224
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 120 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 179
++T PV++ + ++VG++S+ DLL + + G D+T E +K
Sbjct: 37 QVTAVPVLEGEGRVVGVISEADLLLKEELRGE-----------DATMIGQGERLTDHAKA 85
Query: 180 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
DLM+ V V L +AARL+ + +RLPVVD G L GI++R +V++ L
Sbjct: 86 GAVTARDLMSSPAVTVATDAPLPEAARLMARHRVKRLPVVDERGVLKGIVSRIDVLKVFL 145
Query: 240 Q 240
+
Sbjct: 146 R 146
>gi|420156145|ref|ZP_14662991.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Clostridium sp. MSTE9]
gi|394757948|gb|EJF40932.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Clostridium sp. MSTE9]
Length = 624
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSISGSGRADNSMFPEVDSTWKTF 169
+E +E R +G PVID ++G VSD D+L A + G + + + P+ +
Sbjct: 491 IEKFIEYRTSGLPVIDSSRHIIGYVSDGDVLRYMARQDVHVVGESFSYVLPDNEEFVSKA 550
Query: 170 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
EV + K + ++ T + V T L + RL E K ++PV +G LVG I
Sbjct: 551 KEVLQ-------KNILEIATKHTITVEFITPLSEVCRLFYEHKLSKIPVTQ-NGVLVGTI 602
Query: 230 TRGNVVRAALQ 240
+RG+ +R ++
Sbjct: 603 SRGDTMRYLMK 613
>gi|377575728|ref|ZP_09804717.1| hypothetical protein MOPEL_135_01200 [Mobilicoccus pelagius NBRC
104925]
gi|377535571|dbj|GAB49882.1| hypothetical protein MOPEL_135_01200 [Mobilicoccus pelagius NBRC
104925]
Length = 197
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 17/132 (12%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
EA + A+ +L KRIT PV+DD LVG++S+ D+L ++ RA S P+
Sbjct: 17 EAALDEAITLLASKRITLLPVVDDADHLVGVISEIDVLRR-AVEPDARARASRLPD---- 71
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
S + ++MT PV E ++ D + + T + +PVV +L
Sbjct: 72 -----------SPPLPVHITEIMTTDPVTTTEGVDVADLVDVFITTSIKSIPVVRGQ-RL 119
Query: 226 VGIITRGNVVRA 237
VGI++R +++RA
Sbjct: 120 VGIVSRSDIIRA 131
>gi|410694908|ref|YP_003625530.1| Conserved hypothetical protein; putative CBS
(cystathionine-beta-synthase) domain [Thiomonas sp. 3As]
gi|294341333|emb|CAZ89748.1| Conserved hypothetical protein; putative CBS
(cystathionine-beta-synthase) domain [Thiomonas sp. 3As]
Length = 159
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 22/158 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MT P E V IL+E RI G PV D L+G+V++ DL+
Sbjct: 3 VRDLMTPN-------PIRIAPETPVAEIARILIEHRINGVPVTDAGGHLLGIVTEGDLV- 54
Query: 145 LDSISGSGRADNSMFPEVDSTWK------TFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 198
RA + +S WK F K G+ +MT + V
Sbjct: 55 -------HRAADERLEPRESLWKENFYRSVFRRHTPEPDKAEGRTAEQVMTREVLTVAPD 107
Query: 199 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
+N+ AARLL + + LPV++ + +LVG+I+R ++V+
Sbjct: 108 SNVTVAARLLADHNIKSLPVIEHE-RLVGMISRFDLVK 144
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
V DLMTP P+ + T + + AR+L+E + +PV DA G L+GI+T G++V A
Sbjct: 3 VRDLMTPNPIRIAPETPVAEIARILIEHRINGVPVTDAGGHLLGIVTEGDLVHRA 57
>gi|404496740|ref|YP_006720846.1| hypothetical protein Gmet_1882 [Geobacter metallireducens GS-15]
gi|418065311|ref|ZP_12702685.1| CBS domain containing membrane protein [Geobacter metallireducens
RCH3]
gi|78194344|gb|ABB32111.1| CBS domain pair-containing protein [Geobacter metallireducens
GS-15]
gi|373562489|gb|EHP88700.1| CBS domain containing membrane protein [Geobacter metallireducens
RCH3]
Length = 149
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 22/162 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D MTT ++ VK TT+ E EI + R+ PV+D+ L+G+V++ DL+
Sbjct: 4 VRDIMTT--DVVSVKRETTIREL-----AEIFTKHRVGSVPVVDESGNLIGIVTESDLIE 56
Query: 145 LDSISGSGRADNSMFPEVDS--TWKTFNE----VQKLLSKTNGKMVGDLMTPAPVVVRET 198
D + P V S W + E +K L K G+ VGDL T +V
Sbjct: 57 QDK--------SLHIPTVISLFDWVIYLESEKKFEKELQKMTGQTVGDLYTDTAEMVTPD 108
Query: 199 TNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
T + + A ++ K LPVV+ +LVG+++R +++R ++
Sbjct: 109 TPVSEVADIMSSKKLHALPVVEG-KRLVGMVSRIDLIRTMVK 149
>gi|299535418|ref|ZP_07048740.1| acetoin utilization protein [Lysinibacillus fusiformis ZC1]
gi|424737584|ref|ZP_18166035.1| acetoin utilization protein [Lysinibacillus fusiformis ZB2]
gi|298729179|gb|EFI69732.1| acetoin utilization protein [Lysinibacillus fusiformis ZC1]
gi|422948439|gb|EKU42818.1| acetoin utilization protein [Lysinibacillus fusiformis ZB2]
Length = 215
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 27/155 (17%)
Query: 96 HVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 155
+ + PT TV EA L+++ EK++ PV+DD+ ++G++++ D+ + S +
Sbjct: 12 YTLAPTNTVQEA-----LKLMREKKVRHLPVVDDEQHVLGVITERDIKEVLPSSLQDEPN 66
Query: 156 NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 215
+ +F N K V D+M P++ +E+ A E+K
Sbjct: 67 SPIF--------------------NAK-VEDIMVKDPLIGHPLDFVEEVALTFYESKIGC 105
Query: 216 LPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
LP+V GKLVGI+T +++ +++ ATE G++
Sbjct: 106 LPIVSG-GKLVGIVTTTDLLYTYIELTGATEPGSK 139
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 183 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNV 234
+V ++M P + T +++A +L+ E K R LPVVD + ++G+IT ++
Sbjct: 2 IVEEIMNDKPYTLAPTNTVQEALKLMREKKVRHLPVVDDEQHVLGVITERDI 53
>gi|134046422|ref|YP_001097907.1| signal transduction protein [Methanococcus maripaludis C5]
gi|132664047|gb|ABO35693.1| putative signal transduction protein with CBS domains
[Methanococcus maripaludis C5]
Length = 153
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 80/148 (54%), Gaps = 11/148 (7%)
Query: 99 KPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 158
+P T + + A+ I E +I+G PV++ + KLVGL+S+ D++ +I+ + +
Sbjct: 10 RPITLNKDDNIEKAISIFRENKISGAPVVEGE-KLVGLLSESDIIK--AITSHDERFSLV 66
Query: 159 FPE----VDSTWKTFNEVQKLLSKTNGKM---VGDLMTPAPVVVRETTNLEDAARLLLET 211
P ++ KT ++++ + V + M + V T + +AA +++
Sbjct: 67 LPSPFDLIELPLKTAIKIEEFRGDMENALKSEVFEAMAEKVITVSSETPITEAAETMVKN 126
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRAAL 239
K +RLPVV+ + KLVGI+TRG+++ A +
Sbjct: 127 KIKRLPVVEGE-KLVGIVTRGDLIEAMI 153
>gi|311029634|ref|ZP_07707724.1| PAS modulated sigma54 specific transcriptional regulator, Fis
family protein [Bacillus sp. m3-13]
Length = 582
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
+++TP P ++E T LE+A ++ E KY LPVV+ DGKL+G+ TR + + Q K
Sbjct: 6 EMITPIPYQIKEDTTLEEALNIMKEEKYGLLPVVNEDGKLMGVFTRSKLFQMVKQEK 62
>gi|154149618|ref|YP_001403236.1| signal transduction protein [Methanoregula boonei 6A8]
gi|153998170|gb|ABS54593.1| putative signal transduction protein with CBS domains
[Methanoregula boonei 6A8]
Length = 158
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 15/135 (11%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE----VDSTWK 167
A+ IL E I G PV+D + L G++++ D+LA ++ +D+ P ++ +
Sbjct: 23 AVAILREHHIGGLPVLDGE-SLAGIITESDILA--QLATHKLSDDLWLPSPLEIIEVPIR 79
Query: 168 TFNEVQKLLSKTNGKMVGDL-----MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 222
+ +K +K + +GDL MT + ++EDAA L+L+ + RLPV D
Sbjct: 80 EYINWEK--TKDALRNIGDLPVKKVMTHPVITATGDMDIEDAAALMLKERIARLPVTDGK 137
Query: 223 GKLVGIITRGNVVRA 237
KL+GI+TR ++V+A
Sbjct: 138 -KLIGILTRADIVQA 151
>gi|418962567|ref|ZP_13514423.1| CBS domain protein [Streptococcus anginosus subsp. whileyi CCUG
39159]
gi|383345356|gb|EID23482.1| CBS domain protein [Streptococcus anginosus subsp. whileyi CCUG
39159]
Length = 218
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TTV A +I+ E+ + PVI++D +LVGLV++
Sbjct: 3 VKDFMTRK--VVYISPDTTV-----AHAADIMREQGLHRLPVIEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+I+ + + +T + E+ LL+KT K D+M V V + +LEDA
Sbjct: 50 -GTIAEASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
L+L+ K LPVVD + ++ G+IT +V RA L+I E G
Sbjct: 98 TYLMLKNKIGILPVVD-NQQVYGVITDRDVFRAFLEIAGYGEEG 140
>gi|363582867|ref|ZP_09315677.1| Inosine monophosphate dehydrogenase-related protein
[Flavobacteriaceae bacterium HQM9]
Length = 155
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 34/169 (20%)
Query: 76 AAPSSGV---YTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWK 132
A P G+ V D+MT K L P T+ + +E LV ITG PV+D+
Sbjct: 11 AKPKKGMDAAIAVSDYMTKK--LISFSPQHTLLQT-----METLVRNEITGGPVVDEKGT 63
Query: 133 LVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP 192
L+G++S+ D + S DS + FN N ++V M+
Sbjct: 64 LIGMISESDCMKQLS---------------DSRY--FN------MPMNTEIVEKYMSTIV 100
Query: 193 VVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
+ + ++ +AA ++ Y+R PV++ +GKLVG I++ +++ AAL +
Sbjct: 101 ETIDSSASIFEAAEQFYKSPYKRFPVLE-NGKLVGQISQHDIILAALHL 148
>gi|448426713|ref|ZP_21583486.1| peptidase M50 [Halorubrum terrestre JCM 10247]
gi|445679200|gb|ELZ31671.1| peptidase M50 [Halorubrum terrestre JCM 10247]
Length = 394
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 35/154 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT + +LH V T+V + + + E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDIMTPRGDLHTVSEDTSVADL-----MGRMFEERHTGYPVLDGD-ELVGMVTLEDA- 301
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
++ EV++ + + M DL+ P +
Sbjct: 302 -----------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALT 333
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
A + + E RLPVVDADG+LVG+I+R +++ A
Sbjct: 334 ALQTMQEHGVGRLPVVDADGELVGLISRSDLMTA 367
>gi|440681967|ref|YP_007156762.1| Cl- channel voltage-gated family protein [Anabaena cylindrica PCC
7122]
gi|428679086|gb|AFZ57852.1| Cl- channel voltage-gated family protein [Anabaena cylindrica PCC
7122]
Length = 861
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 89/211 (42%), Gaps = 44/211 (20%)
Query: 27 TSFALQLPCLLLSRPGCRVFSVLATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVG 86
T F L LP +++S V S L +D+V + +T AP G+ T
Sbjct: 388 TDFNLVLPLMIVS-----VTSYLV--ADKVVPGSLYDKLLLLKGITIQKDAPIEGILTQ- 439
Query: 87 DFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 146
+T K + T D A V ++ GFPV+++ KLVG+V+ DL
Sbjct: 440 --LTAKNVMQQRVETLETDMA-VEEVIQAFSRSHHRGFPVVENC-KLVGIVTQSDL---- 491
Query: 147 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 206
N ++G + ++MTP PV V+ T L D
Sbjct: 492 --------QNRYL-------------------SHGISLREIMTPQPVTVKPTQTLSDVLY 524
Query: 207 LLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
LL + RLPVV+ KL+GIITR +++RA
Sbjct: 525 LLDRYQISRLPVVERQ-KLIGIITRADIIRA 554
>gi|148260628|ref|YP_001234755.1| signal-transduction protein [Acidiphilium cryptum JF-5]
gi|326403821|ref|YP_004283903.1| hypothetical protein ACMV_16740 [Acidiphilium multivorum AIU301]
gi|338980330|ref|ZP_08631614.1| Signal-transduction protein [Acidiphilium sp. PM]
gi|146402309|gb|ABQ30836.1| putative signal-transduction protein with CBS domains [Acidiphilium
cryptum JF-5]
gi|325050683|dbj|BAJ81021.1| hypothetical protein ACMV_16740 [Acidiphilium multivorum AIU301]
gi|338208767|gb|EGO96602.1| Signal-transduction protein [Acidiphilium sp. PM]
Length = 233
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 94 ELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 153
E+ V P T E V A I++++ ++ PVID +L+G+++D D+L R
Sbjct: 5 EIMTVGPLTVEPETTVADAGRIMLDQNLSALPVIDRGGRLLGIITDGDMLR--------R 56
Query: 154 ADNSMFPEVDSTWKTF---NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 210
+ P++ W+ F + ++T G+ VG++MT V T L DA ++
Sbjct: 57 PELETAPDI-GWWRGFLAPETSARQFARTRGRHVGEIMTTPVRSVGPDTPLCDAIDIMET 115
Query: 211 TKYRRLPVVDADGKLVGIITRGNVV 235
+ ++LPVV + L+G++ R N++
Sbjct: 116 YRVKQLPVVQGE-ILLGMLNRRNIL 139
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
V ++MT P+ V T + DA R++L+ LPV+D G+L+GIIT G+++R
Sbjct: 3 VREIMTVGPLTVEPETTVADAGRIMLDQNLSALPVIDRGGRLLGIITDGDMLR 55
>gi|433443625|ref|ZP_20408925.1| acetoin utilization protein [Anoxybacillus flavithermus TNO-09.006]
gi|432002019|gb|ELK22881.1| acetoin utilization protein [Anoxybacillus flavithermus TNO-09.006]
Length = 214
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 82/159 (51%), Gaps = 27/159 (16%)
Query: 92 KEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 151
K ++ +KP+ T+ +A L I+ +K I P++DD++++VG+V+D DL
Sbjct: 8 KTDVIALKPSNTIADA-----LNIVKQKNIRHLPIVDDEYRVVGIVTDRDL--------- 53
Query: 152 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 211
D S P + + ++QK LS M +++T P+ +E+ A L E
Sbjct: 54 --RDAS--PSIFHANEHLEDLQKPLSTI---MKTNVITGHPL-----DFVEEVAALFYEH 101
Query: 212 KYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMGAQ 250
+ +P+V + KLVGIIT +++ +Q+ A + G+Q
Sbjct: 102 RISCMPIV-KENKLVGIITESDLLYTLVQLTGAHQPGSQ 139
>gi|408371984|ref|ZP_11169737.1| CBS domain-containing protein [Galbibacter sp. ck-I2-15]
gi|407742596|gb|EKF54190.1| CBS domain-containing protein [Galbibacter sp. ck-I2-15]
Length = 153
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 31/157 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D+MT L +P ++ E +E+LV+ +I+G PV D LVG++S+ D
Sbjct: 23 VSDYMT--RNLVTFRPEQSILEV-----MELLVKHKISGGPVCDQRGGLVGIISEAD--C 73
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+ IS S R N P +D + V+K +S + D+ N+ DA
Sbjct: 74 MKQISES-RYFN--MPILDKS------VEKFMSTNVETIPSDM------------NIFDA 112
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQI 241
A RRLPV+D GKLVG ++R +VV AAL++
Sbjct: 113 ASQFHNGHRRRLPVLD-QGKLVGQLSRKDVVVAALKL 148
>gi|83745976|ref|ZP_00943032.1| Transporter [Ralstonia solanacearum UW551]
gi|83727370|gb|EAP74492.1| Transporter [Ralstonia solanacearum UW551]
Length = 440
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
VP AL +L + PV+DD +L+G+V+ DL + RA + W
Sbjct: 316 VPHALRLLQRHGVKSLPVLDDGRRLIGIVTRADL-----TGTAARAPRQRLRD----WFA 366
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ V +MTP + +R + D L + +PVVDA G+L GI
Sbjct: 367 IGAMTP-------PRVSGVMTPRVLTIRADAPMADLVPLFASAGHHHIPVVDAHGRLAGI 419
Query: 229 ITRGNVVRA 237
+T+ +++ A
Sbjct: 420 LTQADIIHA 428
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 173 QKLLSKT-NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
Q+ ++T + D+MTP+ V V T++ A RLL + LPV+D +L+GI+TR
Sbjct: 287 QQAYARTFHALTCADIMTPSVVTVSAATSVPHALRLLQRHGVKSLPVLDDGRRLIGIVTR 346
Query: 232 GNV 234
++
Sbjct: 347 ADL 349
>gi|418965274|ref|ZP_13517052.1| CBS domain protein [Streptococcus constellatus subsp. constellatus
SK53]
gi|383342869|gb|EID21070.1| CBS domain protein [Streptococcus constellatus subsp. constellatus
SK53]
Length = 218
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 26/164 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V DFMT K + + P TTV A +I+ E+ + PVI++D +LVGLV++
Sbjct: 3 VKDFMTRK--VVYISPDTTV-----AHAADIMREQGLHRLPVIEND-QLVGLVTE----- 49
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 204
+I+ + + +T + E+ LL+KT K D+M V V + +LEDA
Sbjct: 50 -GTIAEASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDA 97
Query: 205 ARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATEMG 248
L+L+ K LPVVD + ++ G+IT +V RA L+I E G
Sbjct: 98 TYLMLKNKIGILPVVD-NQQVYGVITDRDVFRAFLEIAGYGEEG 140
>gi|271966184|ref|YP_003340380.1| hypothetical protein [Streptosporangium roseum DSM 43021]
gi|270509359|gb|ACZ87637.1| CBS domain containing membrane protein [Streptosporangium roseum
DSM 43021]
Length = 226
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 114 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 173
E+L+ ++ PV+D D + G+VS+ DLL + G R + P + E
Sbjct: 27 ELLITHAVSAVPVLDSDGHVTGVVSEADLLHKEE--GRKRFHGASCPPPQTGPDQGPEA- 83
Query: 174 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGN 233
K GK+ +LMT V V + A RL+ +RLPV+D G L GI++R +
Sbjct: 84 ---GKARGKVARELMTAPAVTVSMDVPVAAAGRLMEHHGVKRLPVLDGHGHLAGIVSRHD 140
Query: 234 VVR 236
+++
Sbjct: 141 LLK 143
>gi|92117469|ref|YP_577198.1| hypothetical protein Nham_1933 [Nitrobacter hamburgensis X14]
gi|91800363|gb|ABE62738.1| CBS domain containing membrane protein [Nitrobacter hamburgensis
X14]
Length = 228
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 105 DEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 164
++A V + ++ +RI+ P++D KLVG+V++ DL+ + G+ R S + + S
Sbjct: 16 EDATVQDVAKTMIARRISAVPIVDKAGKLVGIVTEADLIHRIEV-GTERP-YSWWLHMLS 73
Query: 165 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 224
+T E K++ + + D+MT T L D A L +R+P+V+ G
Sbjct: 74 GDRTMAE---GYVKSHARKITDIMTREVKTADPETPLIDIAELFETNGIKRVPIVNQAGD 130
Query: 225 LVGIITRGNVVRA 237
L+GI++R N+++A
Sbjct: 131 LIGIVSRANIIQA 143
>gi|207742004|ref|YP_002258396.1| cbs-domain-containing membrane protein [Ralstonia solanacearum
IPO1609]
gi|206593390|emb|CAQ60317.1| cbs-domain-containing membrane protein [Ralstonia solanacearum
IPO1609]
Length = 378
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
VP AL +L + PV+DD +L+G+V+ DL + RA + W
Sbjct: 254 VPHALRLLQRHGVKSLPVLDDGRRLIGIVTRADL-----TGTAARAPRQRLRD----WFA 304
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ V +MTP + +R + D L + +PVVDA G+L GI
Sbjct: 305 IGAMTP-------PRVSGVMTPRVLTIRADAPMADLVPLFASAGHHHIPVVDAHGRLAGI 357
Query: 229 ITRGNVVRA 237
+T+ +++ A
Sbjct: 358 LTQADIIHA 366
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 173 QKLLSKT-NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITR 231
Q+ ++T + D+MTP+ V V T++ A RLL + LPV+D +L+GI+TR
Sbjct: 225 QQAYARTFHALTCADIMTPSVVTVSAATSVPHALRLLQRHGVKSLPVLDDGRRLIGIVTR 284
Query: 232 GNV 234
++
Sbjct: 285 ADL 287
>gi|301064753|ref|ZP_07205133.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300441128|gb|EFK05513.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 431
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 144
V D M + + H V P T V E L I+ + I V+D D +L+GL+SD LL+
Sbjct: 279 VSDIM--RRDTHTVTPDTPVHEV-----LTIIDDNDIQRVAVVDSDGRLLGLISDRTLLS 331
Query: 145 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGD-----LMTPAPVVVRETT 199
S G EV S F+ K K+ GD +M + VRE T
Sbjct: 332 AFSEKAPG------VWEVLSKLSPFSAKPKHTGNVREKL-GDQPAKAVMKTDLITVREDT 384
Query: 200 NLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 239
+++ A L+ E +RLPVVD G G+I+R +++
Sbjct: 385 DIDQAIALMTEHGIKRLPVVDDQGMFKGMISREALLKQGF 424
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 17/128 (13%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS----ISGSGRADNSMFPEVDSTWKT 168
++ L+ R TG PV+D + + VG+VS DL+ ++ ++D+ V
Sbjct: 140 MKALLSARFTGLPVVDSENRPVGVVSQSDLIYRAGMPVRLALMAQSDHERLKTV------ 193
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
V+ L +KT D+MT V ++E L A +++ K +RLPVV+ +G L GI
Sbjct: 194 ---VKGLAAKT----AQDIMTGPAVTIQENDPLTRAVTAMVKNKVKRLPVVNGEGFLTGI 246
Query: 229 ITRGNVVR 236
++R +V +
Sbjct: 247 VSRLDVFQ 254
>gi|162147301|ref|YP_001601762.1| hypothetical protein GDI_1506 [Gluconacetobacter diazotrophicus PAl
5]
gi|161785878|emb|CAP55449.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 235
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 13/131 (9%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLVSDYD--LLALDSISGSGR-ADNSMFPEVDSTWKT 168
A+ +++ R+ PV+ ++ LVG+V++ L++ SG GR AD +F S+ +
Sbjct: 23 AIGLMLTNRVNALPVVTENGLLVGVVTERPDPRNELETRSGHGRLAD--LF---RSSGRQ 77
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+E ++G+ V D+M+ PV V T L DA +LL R LPVV+ + ++VG+
Sbjct: 78 ASE----YVHSHGRKVFDIMSDQPVSVEPGTVLRDAVEVLLLRNIRHLPVVE-NNRVVGM 132
Query: 229 ITRGNVVRAAL 239
++R +V+RA L
Sbjct: 133 VSRTDVLRALL 143
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 184 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 230
V D+MT V V T +L DA L+L + LPVV +G LVG++T
Sbjct: 3 VRDIMTSPAVCVESTRSLADAIGLMLTNRVNALPVVTENGLLVGVVT 49
>gi|402828637|ref|ZP_10877524.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Slackia sp. CM382]
gi|402286445|gb|EJU34920.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Slackia sp. CM382]
Length = 639
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 5/133 (3%)
Query: 105 DEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 164
++ V AL I + +G PV D +VG +SD D++ +D S V
Sbjct: 498 EDGTVGDALAIFAQSGTSGLPVTDGAGAVVGFISDGDVMKYLGSEDFTFSDGSTVFRVGE 557
Query: 165 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGK 224
+TF + + N V ++ T + V LEDA ++L E + ++LPV+ A G+
Sbjct: 558 D-RTFQDRLDAMRSLN---VMEIATKRVIAVDAGMALEDACKILAERRIKKLPVISA-GR 612
Query: 225 LVGIITRGNVVRA 237
VG I+R NVVRA
Sbjct: 613 FVGSISRRNVVRA 625
>gi|160897350|ref|YP_001562932.1| hypothetical protein Daci_1907 [Delftia acidovorans SPH-1]
gi|160362934|gb|ABX34547.1| CBS domain containing membrane protein [Delftia acidovorans SPH-1]
Length = 232
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 60 RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEK 119
R AV A + + P + TV D M+ E V P V++A+ +L E
Sbjct: 70 RLRGAVDAYLSTEKGPSQPRQPLQTVADVMS--HEAVTVSPEAGVNDAW-----RVLAEH 122
Query: 120 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 179
+ PV+D ++VGL+ D+ LD + G ++ + + NEV
Sbjct: 123 GVAQAPVLDAGGRVVGLLLRADMAPLDLLPEPGAIKDA----IALARRPVNEV------- 171
Query: 180 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+++P P V TT+L A +LLET LPV D G L G I+R +++RA
Sbjct: 172 -------MISPIPTVA-TTTDLRRVAGVLLETGLPGLPVTDEQGLLAGFISRTDILRA 221
>gi|339501539|ref|YP_004688913.1| cystathione beta-synthase-like protein [Roseobacter litoralis Och
149]
gi|338760025|gb|AEI96487.1| cystathione beta-synthase-like protein [Roseobacter litoralis Och
149]
Length = 231
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 32/142 (22%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-------------LDSISGSGRAD 155
+ A+ ++++ ++ PV+D D L GLVS+ DL+ L+ +SGSG
Sbjct: 20 IEDAVRLMLDHHVSALPVVDVDGALKGLVSEGDLMRRVRDTDGPRRSWWLELLSGSG--- 76
Query: 156 NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 215
N Q+ + K N + D+MT V V E + + ARLL + + +R
Sbjct: 77 --------------NSAQEFV-KLNSHHIADVMTRDVVSVEEDAPVAEIARLLEKHRIKR 121
Query: 216 LPVVDADGKLVGIITRGNVVRA 237
+PV+ +G +VGI++R N++ A
Sbjct: 122 VPVL-REGPVVGIVSRANLLHA 142
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 186 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVR 236
D+MT + + V + +EDA RL+L+ LPVVD DG L G+++ G+++R
Sbjct: 5 DIMTTSVISVPQDGKIEDAVRLMLDHHVSALPVVDVDGALKGLVSEGDLMR 55
>gi|224476794|ref|YP_002634400.1| hypothetical protein Sca_1310 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421401|emb|CAL28215.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 431
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 35/126 (27%)
Query: 124 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 183
FPV+DDDWKLVG+V+ D++A DS D S +QK+++K
Sbjct: 224 FPVVDDDWKLVGIVTSKDIIAKDS-------DES--------------IQKVMTK----- 257
Query: 184 VGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIK 242
PV+ V+ +T + A +++ LPV + KL+G+++R +V+RA I
Sbjct: 258 --------PVLNVQNSTTVASCAHMMIWEGIELLPVTTINKKLLGVVSREDVLRAMQLIG 309
Query: 243 HATEMG 248
++G
Sbjct: 310 RQPQVG 315
>gi|359728501|ref|ZP_09267197.1| hypothetical protein Lwei2_16929 [Leptospira weilii str.
2006001855]
gi|417780846|ref|ZP_12428602.1| CBS domain protein [Leptospira weilii str. 2006001853]
gi|410778817|gb|EKR63439.1| CBS domain protein [Leptospira weilii str. 2006001853]
Length = 210
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 28/135 (20%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
+ A +I V+KR PV D+ L G++SD D +
Sbjct: 99 ISRAQDIFVQKRFRHVPVFDEKNTLCGIISDRDWMR------------------------ 134
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+KL + GK +G++M + VR + + ++L E + LPVV+ +++GI
Sbjct: 135 ----RKLEHISLGKTIGEIMKTRVLSVRIQAGIGEIVKVLFEERIGCLPVVNDSFQVIGI 190
Query: 229 ITRGNVVRAALQIKH 243
+TR +V+RA L+I
Sbjct: 191 VTRSDVLRAILRINE 205
>gi|398332390|ref|ZP_10517095.1| hypothetical protein LalesM3_12176 [Leptospira alexanderi serovar
Manhao 3 str. L 60]
Length = 213
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 25/135 (18%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
+ A +I V+KR PV+D+ L G++SD D + WK
Sbjct: 99 ISRAQDIFVQKRFRHVPVLDEKNTLCGIISDRDWM---------------------RWK- 136
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
++ + GK +G +M + VR + + ++L E + LPVV+ +++GI
Sbjct: 137 ---LEHISEVELGKTIGKIMKTRVLSVRIQAGIGEIVKVLFEERIGCLPVVNDSFQVIGI 193
Query: 229 ITRGNVVRAALQIKH 243
ITR +V+RA L+I
Sbjct: 194 ITRSDVLRAILRINE 208
>gi|90425526|ref|YP_533896.1| signal-transduction protein [Rhodopseudomonas palustris BisB18]
gi|90107540|gb|ABD89577.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris BisB18]
Length = 242
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Query: 106 EAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 165
+A + A I++ + ++G PV++ +L+G++S+ D + I G+ R +
Sbjct: 17 DASIVDAANIMLSQHVSGLPVVNAAGELIGIISEGDFIRRAEI-GTERKRGRWLRLLLGP 75
Query: 166 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKL 225
++ ++ +G+ VG++MT P V + + + + + +RLPV+ DG++
Sbjct: 76 GQSASD----FVHEHGRKVGEIMTTHPHTVNAEATVAEIVKAMEKHHVKRLPVMQ-DGRM 130
Query: 226 VGIITRGNVVRA 237
VGI+TR N+++A
Sbjct: 131 VGIVTRKNLLQA 142
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 187 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
+MT V V ++ DAA ++L LPVV+A G+L+GII+ G+ +R A
Sbjct: 6 IMTRQVVTVSPDASIVDAANIMLSQHVSGLPVVNAAGELIGIISEGDFIRRA 57
>gi|392544376|ref|ZP_10291513.1| CBS domain-containing protein [Pseudoalteromonas piscicida JCM
20779]
gi|409203458|ref|ZP_11231661.1| CBS domain-containing protein [Pseudoalteromonas flavipulchra JG1]
Length = 139
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 24/155 (15%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 143
TV D MT P + E + A ++ EK + PVID+ LVG+++ ++
Sbjct: 4 TVADLMTPD-------PFAVIAENTLQDAHNLMKEKNVRHIPVIDEAGALVGMLTQKIMI 56
Query: 144 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 203
A +V T+ L K V D+M VR + +L+D
Sbjct: 57 A----------------KVMGIMATYG-ANALARKEKQTKVQDIMATDFASVRPSQSLQD 99
Query: 204 AARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238
R ++ ++ +PVVD KLVGI+T + VR A
Sbjct: 100 VVRFFVDNRHGCMPVVDEQNKLVGILTSSDFVRLA 134
>gi|421112247|ref|ZP_15572705.1| CBS domain protein [Leptospira santarosai str. JET]
gi|422004447|ref|ZP_16351665.1| hypothetical protein LSS_13174 [Leptospira santarosai serovar
Shermani str. LT 821]
gi|410802302|gb|EKS08462.1| CBS domain protein [Leptospira santarosai str. JET]
gi|417256891|gb|EKT86304.1| hypothetical protein LSS_13174 [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 211
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 25/132 (18%)
Query: 109 VPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 168
+ A +I V +R PV D+ L G++SD D + WK
Sbjct: 97 ISKAQDIFVRRRFRHVPVFDEKNTLCGIISDRDWMC---------------------WKL 135
Query: 169 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGI 228
+ + L GK +G +M + VR + + A++L E + LPVV+ +++GI
Sbjct: 136 EHTTEIEL----GKTIGKIMKTKVLSVRIQAGIGEIAKVLFEERIGCLPVVNDSFQVIGI 191
Query: 229 ITRGNVVRAALQ 240
ITR +V+RA L+
Sbjct: 192 ITRSDVLRAILR 203
>gi|395777454|ref|ZP_10457969.1| hypothetical protein Saci8_47232 [Streptomyces acidiscabies 84-104]
Length = 235
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 12/128 (9%)
Query: 113 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 172
+ +L + RI G PV+D+D ++G++S DL+ ++ R S
Sbjct: 27 VRLLDDHRIGGLPVVDEDGTVIGVISATDLVPHQAVRTGVRHRFS------------PRA 74
Query: 173 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRG 232
++ +++ + G +MT V VR +AARL+ + RLPVVD + +LVGI+TR
Sbjct: 75 RRAAARSRARTAGGIMTAPAVTVRADATATEAARLMAARRVERLPVVDEEDRLVGIVTRH 134
Query: 233 NVVRAALQ 240
+++ L+
Sbjct: 135 DLLHVFLR 142
>gi|424887311|ref|ZP_18310916.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393175083|gb|EJC75126.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 160
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 24/159 (15%)
Query: 89 MTTKEELHVVKPTTTVDEAFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 148
MTT L V P TTV EA ++ +T PV+D + + +GL+S+ D++
Sbjct: 9 MTTN--LVTVSPETTVAEAA-----RCMLTHHVTAVPVVDPENRPLGLISEGDVM----- 56
Query: 149 SGSGRADNSMFPEVDSTW-KTFNEVQKLLS------KTNGKMVGDLMTPAPVVVRETTNL 201
R + F + W + E + L + N + D+M A + E T+L
Sbjct: 57 ----RHFGAQFQSKRAQWLRMLAEGEALAPEFLAEIRLNQQHARDIMQRAIISADEETSL 112
Query: 202 EDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQ 240
+ A L+L+ +R+P++ DG LVGI++R +VVR+ ++
Sbjct: 113 AELADLMLKHGIKRVPIL-RDGVLVGIVSRADVVRSVVE 150
>gi|222111943|ref|YP_002554207.1| signal transduction protein with cbs domains [Acidovorax ebreus
TPSY]
gi|221731387|gb|ACM34207.1| putative signal transduction protein with CBS domains [Acidovorax
ebreus TPSY]
Length = 226
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 26/179 (14%)
Query: 59 LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVE 118
LR AV A A P + VGD MT V P V++A+ + L E
Sbjct: 63 LRLLEAVSAYVQTEQGPAQPRQPLSRVGDVMTRGA--LTVAPDQRVNDAW-----QTLAE 115
Query: 119 KRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSK 178
I PV++D ++VGL+ D+ LD + PE + + ++ +S+
Sbjct: 116 HEIAQAPVVNDQGQVVGLLLRADMAPLD-----------LLPEPGAVKQAIELARRPVSE 164
Query: 179 TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 237
+++P P V +T L A +LL+T LPV D G L G I+R +++RA
Sbjct: 165 V-------MVSPVPTVAADT-ELRRVAGVLLDTGLPGLPVTDERGLLAGFISRTDILRA 215
>gi|406995165|gb|EKE13969.1| CBS protein [uncultured bacterium]
Length = 152
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 112 ALEILVEKRITGFPVIDDDWKLVGLV--SDYDLLALDSISGSGRADNSMFPEVDSTWKTF 169
A ++L +TG PV+ D+ KL+G++ SD+ L LD S + P D
Sbjct: 23 AAQLLNTYHLTGLPVVKDN-KLMGIITESDFILKRLDIHLPSFLKLLNSIPFDDINQNKL 81
Query: 170 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGII 229
+E K L + V D+MT + + T +E A +L K LPVVD D KLVGII
Sbjct: 82 SEDYKHLLEIK---VADIMTKEVITISPDTPIEKIAHILTSQKVNPLPVVDNDSKLVGII 138
Query: 230 TRGNVVR 236
++ ++V+
Sbjct: 139 SKADLVK 145
>gi|405382733|ref|ZP_11036511.1| CBS-domain-containing membrane protein [Rhizobium sp. CF142]
gi|397320767|gb|EJJ25197.1| CBS-domain-containing membrane protein [Rhizobium sp. CF142]
Length = 220
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 107 AFVPTALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 166
A + A+ ++++ I+G PV+DD+ ++ G++++ DLL I + R + D
Sbjct: 18 AGIRHAVAVMMQNNISGLPVVDDEGRICGILTEGDLLLRREIRHAPRTARNAEITSDVDL 77
Query: 167 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLV 226
+ + NG V D+M+ +V + + D A L + +R+PVVD G+LV
Sbjct: 78 DRY-------IRGNGWSVRDIMSRDVIVASPDSEVSDIAESLEVHRIKRIPVVDV-GRLV 129
Query: 227 GIITRGNVV 235
GI++R +++
Sbjct: 130 GIVSRRDIL 138
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,761,282,173
Number of Sequences: 23463169
Number of extensions: 153422242
Number of successful extensions: 482470
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4443
Number of HSP's successfully gapped in prelim test: 4029
Number of HSP's that attempted gapping in prelim test: 460180
Number of HSP's gapped (non-prelim): 21022
length of query: 250
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 111
effective length of database: 9,097,814,876
effective search space: 1009857451236
effective search space used: 1009857451236
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)