Your job contains 1 sequence.
>025619
MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTVVVH
AVQEEVVQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT
TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDW
EGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFT
IISLCIYCIL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025619
(250 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2087901 - symbol:Tic62 "translocon at the inne... 154 1.8e-09 1
TAIR|locus:2040854 - symbol:AT2G34460 species:3702 "Arabi... 143 2.5e-08 1
TAIR|locus:2040716 - symbol:AT2G37660 species:3702 "Arabi... 143 3.9e-08 1
TAIR|locus:2185228 - symbol:AT5G02240 species:3702 "Arabi... 112 0.00018 1
>TAIR|locus:2087901 [details] [associations]
symbol:Tic62 "translocon at the inner envelope membrane
of chloroplasts 62" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0010103
"stomatal complex morphogenesis" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0019684 "photosynthesis, light
reaction" evidence=RCA] InterPro:IPR016040 GO:GO:0009570
EMBL:CP002686 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0015031
GO:GO:0009941 GO:GO:0009706 GO:GO:0009535 eggNOG:COG0702
EMBL:AP002039 EMBL:BT002039 EMBL:BT008403 IPI:IPI00530638
RefSeq:NP_188519.2 UniGene:At.27605 ProteinModelPortal:Q8H0U5
STRING:Q8H0U5 PaxDb:Q8H0U5 PRIDE:Q8H0U5 EnsemblPlants:AT3G18890.1
GeneID:821422 KEGG:ath:AT3G18890 TAIR:At3g18890
HOGENOM:HOG000090541 InParanoid:Q8H0U5 OMA:ICCIGAS PhylomeDB:Q8H0U5
ProtClustDB:PLN03209 Genevestigator:Q8H0U5 Uniprot:Q8H0U5
Length = 641
Score = 154 (59.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 41/122 (33%), Positives = 67/122 (54%)
Query: 124 GKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNT-PEKVDWEG 182
G Q E L++ + D + PA+ + +ICC G S + D T P ++D+
Sbjct: 136 GTQPVEKLEIVECDLEKKDSIQPAL-GNASVIICCIGA----SEKEISDITGPYRIDYLA 190
Query: 183 VRNLVSALPSS-LKRIVLVSSVGVTKFNELPWSIMNLF-GVLKYKKMGEDFVQKSGLPFT 240
+NLV A S+ + +LV+S+G KF P +I+NLF GVL +K+ E+ + +SGL +
Sbjct: 191 TKNLVDAATSAKVNNFILVTSLGTNKFG-FPAAILNLFWGVLCWKRKAEEALIESGLNYA 249
Query: 241 II 242
I+
Sbjct: 250 IV 251
>TAIR|locus:2040854 [details] [associations]
symbol:AT2G34460 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010287
"plastoglobule" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] InterPro:IPR016040
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0009941 GO:GO:0009535 GO:GO:0010287
EMBL:AC004077 EMBL:AC004481 eggNOG:COG0702 EMBL:AY034977
EMBL:AY056425 EMBL:BT000884 IPI:IPI00536241 PIR:T02333
RefSeq:NP_565789.2 UniGene:At.48549 UniGene:At.60259
ProteinModelPortal:Q8H124 SMR:Q8H124 IntAct:Q8H124 STRING:Q8H124
PaxDb:Q8H124 PRIDE:Q8H124 EnsemblPlants:AT2G34460.1 GeneID:818009
KEGG:ath:AT2G34460 TAIR:At2g34460 HOGENOM:HOG000262433
InParanoid:Q8H124 OMA:NFRAVEL PhylomeDB:Q8H124 ProtClustDB:PLN00141
Genevestigator:Q8H124 Uniprot:Q8H124
Length = 280
Score = 143 (55.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 51/138 (36%), Positives = 74/138 (53%)
Query: 113 LRDPEKATTLFGKQDEETLQVCKGD-TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDG 171
+RD EKA T F +D+ +LQ+ + D T P L I + VIC TG P +D
Sbjct: 77 VRDVEKAKTSF--KDDPSLQIVRADVTEGPDKLAEVIGDDSQAVICATGFR--PG--FD- 129
Query: 172 DNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVT--KFNEL--P-WSIMNLFGV-LKY 224
TP KVD G NLV A +++ VLVSS+ V ++ P + +NLFG+ L
Sbjct: 130 IFTPWKVDNFGTVNLVDACRKQGVEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVA 189
Query: 225 KKMGEDFVQKSGLPFTII 242
K E +++KSG+ +TI+
Sbjct: 190 KLQAEKYIKKSGINYTIV 207
>TAIR|locus:2040716 [details] [associations]
symbol:AT2G37660 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0042742
"defense response to bacterium" evidence=IEP;RCA] [GO:0048046
"apoplast" evidence=IDA] [GO:0005507 "copper ion binding"
evidence=IDA] [GO:0000272 "polysaccharide catabolic process"
evidence=RCA] [GO:0005982 "starch metabolic process" evidence=RCA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009409 "response
to cold" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019684 "photosynthesis, light reaction"
evidence=RCA] InterPro:IPR016040 EMBL:AC004684 GO:GO:0009570
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0048046 GO:GO:0042742 GO:GO:0005507
GO:GO:0009579 eggNOG:COG0702 UniGene:At.26205 UniGene:At.66411
HOGENOM:HOG000262433 EMBL:AY042827 EMBL:AY081456 EMBL:AY085201
IPI:IPI00539231 PIR:T02532 RefSeq:NP_565868.1
ProteinModelPortal:O80934 SMR:O80934 STRING:O80934
SWISS-2DPAGE:O80934 World-2DPAGE:0003:O80934 PaxDb:O80934
PRIDE:O80934 ProMEX:O80934 EnsemblPlants:AT2G37660.1 GeneID:818343
KEGG:ath:AT2G37660 TAIR:At2g37660 InParanoid:O80934 OMA:GTNPNHP
PhylomeDB:O80934 ProtClustDB:CLSN2688756 Genevestigator:O80934
GermOnline:AT2G37660 Uniprot:O80934
Length = 325
Score = 143 (55.4 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 49/147 (33%), Positives = 76/147 (51%)
Query: 109 SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT-----A 163
+R L+R E + G +DE V GD R+ + PA+ EG+ ++ T
Sbjct: 105 ARGLVRTKESKEKING-EDE----VFIGDIRDTASIAPAV-EGIDALVILTSAVPQMKPG 158
Query: 164 F-PSRR------WDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSVGVTKFNELPWSI 215
F PS+ +D PE+VDW G +N + A ++ +K+IVLV S+G T N SI
Sbjct: 159 FDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGGTNINHPLNSI 218
Query: 216 MNLFGVLKYKKMGEDFVQKSGLPFTII 242
N +L +K+ E ++ SG+P+TII
Sbjct: 219 GNA-NILVWKRKAEQYLADSGIPYTII 244
>TAIR|locus:2185228 [details] [associations]
symbol:AT5G02240 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0048046 "apoplast" evidence=IDA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886
GO:GO:0009737 GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046
EMBL:AL162508 eggNOG:COG0702 UniGene:At.21103 HOGENOM:HOG000262433
ProtClustDB:CLSN2688756 EMBL:AY142045 EMBL:BT000751 EMBL:AK221714
EMBL:AF410336 IPI:IPI00530877 PIR:T48245 RefSeq:NP_568098.1
PDB:1XQ6 PDB:1YBM PDB:2Q46 PDB:2Q4B PDBsum:1XQ6 PDBsum:1YBM
PDBsum:2Q46 PDBsum:2Q4B ProteinModelPortal:Q94EG6 SMR:Q94EG6
PaxDb:Q94EG6 PRIDE:Q94EG6 ProMEX:Q94EG6 DNASU:830851
EnsemblPlants:AT5G02240.1 GeneID:830851 KEGG:ath:AT5G02240
TAIR:At5g02240 InParanoid:Q94EG6 OMA:KTGFRIA PhylomeDB:Q94EG6
EvolutionaryTrace:Q94EG6 Genevestigator:Q94EG6 GermOnline:AT5G02240
Uniprot:Q94EG6
Length = 253
Score = 112 (44.5 bits), Expect = 0.00018, P = 0.00018
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 136 GDTRNPKDLDPAIFEGVTHVICCTGTT-----AF-PSRR------WDGDNTPEKVDWEGV 183
GD + ++PA F+G+ ++ T F P++ ++ PE+VDW G
Sbjct: 55 GDITDADSINPA-FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQ 113
Query: 184 RNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
+N + A + +K IV+V S+G T + P + + +L +K+ E ++ SG P+TII
Sbjct: 114 KNQIDAAKVAGVKHIVVVGSMGGTNPDH-PLNKLGNGNILVWKRKAEQYLADSGTPYTII 172
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 250 213 0.00084 112 3 11 22 0.37 33
31 0.49 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 603 (64 KB)
Total size of DFA: 172 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.38u 0.12s 17.50t Elapsed: 00:00:00
Total cpu time: 17.39u 0.12s 17.51t Elapsed: 00:00:00
Start: Fri May 10 18:30:04 2013 End: Fri May 10 18:30:04 2013