BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025620
(250 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BZJ7|DCNL2_MOUSE DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=2 SV=3
Length = 259
Score = 224 bits (570), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 160/247 (64%), Gaps = 8/247 (3%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
MHKL + +DK++QF++ T ASE+ A+ L ++W L+ A D F+ P++ KS
Sbjct: 1 MHKLKSAQKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSV 60
Query: 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
D + LE+LY+RYKDP + I +DGI C+DL +DP I +LV++W +AAT CEFSK+
Sbjct: 61 DQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKK 120
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
EF+ G+ LG DS ++ + + + ELKD KF+++Y F F +AK GQK L L+ A+
Sbjct: 121 EFVDGMTELGCDSTERLKALLPRLEQELKDPAKFKDLYQFTFTFAKNPGQKGLDLEMAVA 180
Query: 174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYL 233
W+L+ + + + +D W FL H ++I RDTW+ LL+F + LSNYD EGAWP L
Sbjct: 181 YWKLVLSGR-FKFLDLWNTFLLEHHKRSIPRDTWNLLLDFGNMIADDLSNYDEEGAWPVL 239
Query: 234 IDEFVEY 240
ID+FVEY
Sbjct: 240 IDDFVEY 246
>sp|Q6PH85|DCNL2_HUMAN DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=1 SV=1
Length = 259
Score = 222 bits (566), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 156/247 (63%), Gaps = 8/247 (3%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
MHKL S +DK++QF++ T A E+ A+ L ++W L+ A D F+ P S ++
Sbjct: 1 MHKLKSSQKDKVRQFMACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAV 60
Query: 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
D + LE LY RYKDP + I VDGI C+DL +DP I +LV++W +AAT CEFS++
Sbjct: 61 DKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRK 120
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
EF+ G+ LG DS++K + + + ELKD KF++ Y F F +AK GQK L L+ A+
Sbjct: 121 EFLDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFTFTFAKNPGQKGLDLEMAVA 180
Query: 174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYL 233
W+L+ + + + +D W FL H ++I RDTW+ LL+F + +SNYD EGAWP L
Sbjct: 181 YWKLVLSGR-FKFLDLWNTFLMEHHKRSIPRDTWNLLLDFGNMIADDMSNYDEEGAWPVL 239
Query: 234 IDEFVEY 240
ID+FVEY
Sbjct: 240 IDDFVEY 246
>sp|Q96GG9|DCNL1_HUMAN DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=1 SV=1
Length = 259
Score = 220 bits (561), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 158/247 (63%), Gaps = 8/247 (3%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
M+KL S +DK++QF+ T +SEK A+ L +DW L+ A D F+ P+ K
Sbjct: 1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60
Query: 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
D + LE+LYNRYKDP + I +DGI C+DL +DP I +L+++W +AAT CEFSKQ
Sbjct: 61 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
EF+ G+ LG DS++K + +I M ELK+ +F++ Y F F +AK GQK L L+ AI
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIA 180
Query: 174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYL 233
W L+ ++ +D W +FL H ++I +DTW+ LL+F+ + +SNYD EGAWP L
Sbjct: 181 YWNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVL 239
Query: 234 IDEFVEY 240
ID+FVE+
Sbjct: 240 IDDFVEF 246
>sp|Q5ZKU1|DCNL1_CHICK DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE=2 SV=1
Length = 259
Score = 218 bits (556), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 157/247 (63%), Gaps = 8/247 (3%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
M+KL S +DK++QF+ T +SEK A+ L +DW L+ A D F+ P+ K
Sbjct: 1 MNKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60
Query: 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
D + LE+LYNRYKDP + I +DGI C+DL +DP I +L+++W +AAT CEFSK
Sbjct: 61 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKL 120
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
EF+ G+ LG DS++K + +I M ELK+ +F++ Y F F +AK GQK L L+ AI
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIA 180
Query: 174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYL 233
W L+ ++ +D W +FL H ++I +DTW+ LL+F+ + +SNYD EGAWP L
Sbjct: 181 YWNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVL 239
Query: 234 IDEFVEY 240
ID+FVE+
Sbjct: 240 IDDFVEF 246
>sp|Q9QZ73|DCNL1_MOUSE DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=2 SV=1
Length = 259
Score = 218 bits (555), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 157/247 (63%), Gaps = 8/247 (3%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
M+KL S +DK++QF+ T +SEK A+ L +DW L+ A D F+ P+ K
Sbjct: 1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60
Query: 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
D + LE+LY RYKDP + I +DGI C+DL +DP I +L+++W +AAT CEFSKQ
Sbjct: 61 DRKKLEQLYTRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
EF+ G+ LG DS++K + +I M ELK+ +F++ Y F F +AK GQK L L+ AI
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIA 180
Query: 174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYL 233
W L+ ++ +D W +FL H ++I +DTW+ LL+F+ + +SNYD EGAWP L
Sbjct: 181 YWNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSSMIADDMSNYDEEGAWPVL 239
Query: 234 IDEFVEY 240
ID+FVE+
Sbjct: 240 IDDFVEF 246
>sp|Q9VUQ8|DCN1L_DROME DCN1-like protein OS=Drosophila melanogaster GN=CG7427 PE=1 SV=2
Length = 288
Score = 211 bits (538), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 160/247 (64%), Gaps = 4/247 (1%)
Query: 1 MHKL-SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLT-DTRH 58
M+KL S ++RDK+++F+S+T E+ A+ L+ +DW E A D ++ P+ D +
Sbjct: 1 MNKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRELDRKR 60
Query: 59 LEELYNRYKDPYLDM-ILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIG 117
+E+L+ RY+DP + I G+ DL + P ++L+++W A CEFS+ EFI
Sbjct: 61 IEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFIN 120
Query: 118 GLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQL 177
G+ LGIDS+DK + ++ + EL D KF++ Y+F F +AK+ GQK + L+ AI W +
Sbjct: 121 GMCDLGIDSIDKLKTKLPILEQELNDAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCI 180
Query: 178 LFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEF 237
+ + + + +D WCQFL+ KH +AISRDTW+ LL+FA +D +SNYD+EGAWP LID+F
Sbjct: 181 VLSGR-FKFLDIWCQFLEEKHKRAISRDTWNLLLDFATNIDDRMSNYDSEGAWPVLIDDF 239
Query: 238 VEYLTEN 244
VE+ EN
Sbjct: 240 VEWCQEN 246
>sp|Q8K0V2|DCNL3_MOUSE DCN1-like protein 3 OS=Mus musculus GN=Dcun1d3 PE=2 SV=1
Length = 304
Score = 167 bits (423), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 118/191 (61%), Gaps = 4/191 (2%)
Query: 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
+ LEEL+ RYKD D IL +G+ CNDL VDP + +L+++W +AATMC+F+++EF
Sbjct: 89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148
Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQKSLALDTAIGM 174
G +++ DS+D R + E K E KF+++Y F F + E+GQ+SL + AI +
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIAL 208
Query: 175 WQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWSQLLEFARTVDPALSNYDAEGAWPY 232
W+L+F + P++D W FL + K ISRDTW+ L F + + P LSNY + AWP
Sbjct: 209 WKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWNMFLNFTQVIGPDLSNYSEDEAWPS 268
Query: 233 LIDEFVEYLTE 243
L D FVE+ E
Sbjct: 269 LFDTFVEWEME 279
>sp|Q4V8B2|DCNL3_RAT DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d3 PE=2 SV=1
Length = 304
Score = 167 bits (423), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 118/191 (61%), Gaps = 4/191 (2%)
Query: 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
+ LEEL+ RYKD D IL +G+ CNDL VDP + +L+++W +AATMC+F+++EF
Sbjct: 89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148
Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQKSLALDTAIGM 174
G +++ DS+D R + E K E KF+++Y F F + E+GQ+SL + AI +
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIAL 208
Query: 175 WQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWSQLLEFARTVDPALSNYDAEGAWPY 232
W+L+F + P++D W FL + K ISRDTW+ L F + + P LSNY + AWP
Sbjct: 209 WKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWNMFLNFTQVIGPDLSNYSEDEAWPS 268
Query: 233 LIDEFVEYLTE 243
L D FVE+ E
Sbjct: 269 LFDTFVEWEME 279
>sp|Q5E9V1|DCNL3_BOVIN DCN1-like protein 3 OS=Bos taurus GN=DCUN1D3 PE=2 SV=1
Length = 304
Score = 167 bits (423), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 124/202 (61%), Gaps = 5/202 (2%)
Query: 47 QPQSKSLTDT-RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA 105
+P+S + + + LEEL+ RYKD D IL +G+ CNDL VDP + +L+++W +AA
Sbjct: 78 EPKSNAEESSLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAA 137
Query: 106 TMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQ 163
TMC+F+++EF G +++ DS+D R + E K E KF+++Y F F + E+GQ
Sbjct: 138 TMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQ 197
Query: 164 KSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWSQLLEFARTVDPAL 221
+SL + AI +W+L+F + P++D W FL + K ISRDTW+ L F + + P L
Sbjct: 198 RSLHREIAIALWKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWNMFLNFTQVIGPDL 257
Query: 222 SNYDAEGAWPYLIDEFVEYLTE 243
SNY + AWP L D FVE+ E
Sbjct: 258 SNYSEDEAWPSLFDTFVEWEME 279
>sp|Q5R9G1|DCNL3_PONAB DCN1-like protein 3 OS=Pongo abelii GN=DCUN1D3 PE=2 SV=1
Length = 304
Score = 167 bits (423), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 118/191 (61%), Gaps = 4/191 (2%)
Query: 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
+ LEEL+ RYKD D IL +G+ CNDL VDP + +L+++W +AATMC+F+++EF
Sbjct: 89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148
Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQKSLALDTAIGM 174
G +++ DS+D R + E K E KF+++Y F F + E+GQ+SL + AI +
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIAL 208
Query: 175 WQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWSQLLEFARTVDPALSNYDAEGAWPY 232
W+L+F + P++D W FL + K ISRDTW+ L F + + P LSNY + AWP
Sbjct: 209 WKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWNMFLNFTQVIGPDLSNYSEDEAWPS 268
Query: 233 LIDEFVEYLTE 243
L D FVE+ E
Sbjct: 269 LFDTFVEWEME 279
>sp|Q8IWE4|DCNL3_HUMAN DCN1-like protein 3 OS=Homo sapiens GN=DCUN1D3 PE=1 SV=1
Length = 304
Score = 167 bits (423), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 118/191 (61%), Gaps = 4/191 (2%)
Query: 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
+ LEEL+ RYKD D IL +G+ CNDL VDP + +L+++W +AATMC+F+++EF
Sbjct: 89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148
Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQKSLALDTAIGM 174
G +++ DS+D R + E K E KF+++Y F F + E+GQ+SL + AI +
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIAL 208
Query: 175 WQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWSQLLEFARTVDPALSNYDAEGAWPY 232
W+L+F + P++D W FL + K ISRDTW+ L F + + P LSNY + AWP
Sbjct: 209 WKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWNMFLNFTQVIGPDLSNYSEDEAWPS 268
Query: 233 LIDEFVEYLTE 243
L D FVE+ E
Sbjct: 269 LFDTFVEWEME 279
>sp|A4IHK8|DCNL3_XENTR DCN1-like protein 3 OS=Xenopus tropicalis GN=dcun1d3 PE=2 SV=1
Length = 303
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 141/254 (55%), Gaps = 15/254 (5%)
Query: 2 HKLSRSNRDKLQQFVSITG-ASEKAALQALKASDWHLE-------GAFDVFYSQPQSKSL 53
HK S S++D + +SI G AS + + K D LE G Q L
Sbjct: 28 HKRSSSHKD---EHLSICGKASREILVNGTKKGDVSLEASQPLAAGGDTKKKEQGTGAEL 84
Query: 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
+ + +EEL+ RYKD D IL +G+ CNDL VDP + +LV++W +AATMC+F+++
Sbjct: 85 SSVQRIEELFWRYKDEREDAILEEGMERFCNDLYVDPTEFRVLVLAWKFQAATMCKFTRR 144
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQKSLALDTA 171
EF G +++ D ++ R + E K E KF+++Y F F + E+GQ+SL + A
Sbjct: 145 EFFEGCKAINADGIEGICARFPSLLNEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIA 204
Query: 172 IGMWQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWSQLLEFARTVDPALSNYDAEGA 229
I +W+L+F + + ++D W FL + K ISRDTW+ L F + + P LSNY + A
Sbjct: 205 IALWKLVFTQNKPLILDQWLDFLTENPSGIKGISRDTWNMFLNFTQVIGPDLSNYSEDEA 264
Query: 230 WPYLIDEFVEYLTE 243
WP L D FVE+ E
Sbjct: 265 WPSLFDTFVEWEME 278
>sp|Q6DFA1|DCNL3_XENLA DCN1-like protein 3 OS=Xenopus laevis GN=dcun1d3 PE=2 SV=1
Length = 303
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 143/254 (56%), Gaps = 15/254 (5%)
Query: 2 HKLSRSNRDKLQQFVSITG-ASEKAALQALKASDWHLEGAFDVFYS-------QPQSKSL 53
HK S S++ ++ +SI G AS + + K D LE + + Q L
Sbjct: 28 HKRSSSHK---EEHMSICGKASGEILVNGTKKGDASLEASQPLAVGVDTKKKEQGVGAEL 84
Query: 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
+ + +EEL+ RYKD D IL +G+ C+DL VDP + +LV++W +AATMC+F+++
Sbjct: 85 SSLQRIEELFRRYKDEREDAILEEGMERFCDDLCVDPTEFRVLVLAWKFQAATMCKFTRR 144
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQKSLALDTA 171
EF G +S+ D ++ + + E K E KF+++Y F F + E+GQ+SL + A
Sbjct: 145 EFFEGCKSINADGIESICSQFPGLLNEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIA 204
Query: 172 IGMWQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWSQLLEFARTVDPALSNYDAEGA 229
I +W+L+F + + ++D W +FL + K ISRDTW+ L F + + P LSNY + A
Sbjct: 205 IALWKLVFTQNKPLILDQWLEFLTENPSGIKGISRDTWNMFLNFTQVIGPDLSNYSEDEA 264
Query: 230 WPYLIDEFVEYLTE 243
WP L D FVE+ E
Sbjct: 265 WPSLFDTFVEWEME 278
>sp|Q9U3C8|DCN1_CAEEL Defective in cullin neddylation protein 1 OS=Caenorhabditis elegans
GN=dcn-1 PE=1 SV=2
Length = 295
Score = 157 bits (397), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 145/275 (52%), Gaps = 32/275 (11%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
M++L + KL+QFV T +E +L L ++W++E A +++ P +
Sbjct: 1 MNRLKSDQKTKLRQFVQWTQVTEAVSLNFLAKANWNIEYAMTLYFDNPNLFAGSTPQPSV 60
Query: 55 DTRHLEELYNRYKDPYLDM----ILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEF 110
D ++E L+N+Y DP + + GI L DL + D +LV++W A T CEF
Sbjct: 61 DRSNIERLFNQYVDPKDKVGEKRMGPHGINRLLTDLGYEATDRRVLVLAWKFTAQTQCEF 120
Query: 111 SKQEFIGGLQSLGIDSLDKFRERISFMRAELK-DEQKFREIYNFAFAWAKEKGQKSLALD 169
S E++ G+ +L D++ R+RI + + L+ D+ KF E+Y FAF +AK ++L L+
Sbjct: 121 SLDEWVKGMTALQADTVQNLRQRIDSINSGLESDKAKFHELYLFAFNYAKSAACRNLDLE 180
Query: 170 TAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKA--------------------ISRDTWSQ 209
TAI W +LF ++ ++ W FL A+ N A ISRDTW+
Sbjct: 181 TAICCWDVLFGQRS-TIMTQWIDFLWAQENAAASRLAQNVGASNAKQFKSVWISRDTWNL 239
Query: 210 LLEFARTVDPALSNYDAEGAWPYLIDEFVEYLTEN 244
+F P LS+YD EGAWP LID+FV+Y EN
Sbjct: 240 FWDFILLSKPDLSDYDDEGAWPVLIDQFVDYCREN 274
>sp|Q5RHX6|DCNL4_DANRE DCN1-like protein 4 OS=Danio rerio GN=dcun1d4 PE=2 SV=2
Length = 280
Score = 154 bits (388), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 113/169 (66%), Gaps = 1/169 (0%)
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
D++ +G+ C D+ V+P+++VMLV++W + A +M F+ QE++ G+ SL DS +K R
Sbjct: 106 DVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQSMGYFTLQEWLKGMGSLQCDSTEKLR 165
Query: 132 ERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWC 191
+ ++R+ L D F+ IY +AF +A+EK Q+SL L+TA M LL K WPL +
Sbjct: 166 NSLDYLRSVLNDATSFKLIYRYAFDFAREKDQRSLDLNTAKCMLGLLLG-KTWPLFPVFN 224
Query: 192 QFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEY 240
QFL+ K I++D W +LEF+RT++ LSNYD +GAWP L+DEFVE+
Sbjct: 225 QFLEQSKYKVINKDQWCNVLEFSRTINLDLSNYDEDGAWPVLLDEFVEW 273
>sp|Q1RMX9|DCNL5_BOVIN DCN1-like protein 5 OS=Bos taurus GN=DCUN1D5 PE=2 SV=1
Length = 236
Score = 151 bits (381), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 134/224 (59%), Gaps = 9/224 (4%)
Query: 24 KAALQALKASDWHLEGAFDVFY--SQPQSKSLTDTRHLEEL-----YNRYKDPYLDMILV 76
K+ + A A D L+ Y SQP ++ ++ H + Y P +++
Sbjct: 8 KSGVAAAAAEDGGLKKCKISSYCRSQPPARLISGEEHFSSKKCLAWFYEYAGPD-EVVGP 66
Query: 77 DGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISF 136
+G+ C D+ V+P++I+MLV++W ++A +M F+K+E++ G+ SL D +K + + F
Sbjct: 67 EGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDF 126
Query: 137 MRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQA 196
+R++L D F+ IY +AF +A++K Q+SL +DTA M LL + WPL + Q+L+
Sbjct: 127 LRSQLNDISSFKNIYRYAFDFARDKDQRSLDIDTAKSMLALLLG-RTWPLFSVFYQYLEQ 185
Query: 197 KHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEY 240
+ +++D W +LEF+RTV LSNYD +GAWP L+DEFVE+
Sbjct: 186 SKYRVMNKDQWYNVLEFSRTVHADLSNYDEDGAWPVLLDEFVEW 229
>sp|Q92564|DCNL4_HUMAN DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=1 SV=2
Length = 292
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 112/169 (66%), Gaps = 1/169 (0%)
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
D++ +G+ C D+ V+P+++VMLV++W + A M F+ QE++ G+ SL D+ +K R
Sbjct: 118 DVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLR 177
Query: 132 ERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWC 191
+ ++R+ L D F+ IY +AF +A+EK Q+SL ++TA M LL K WPL +
Sbjct: 178 NTLDYLRSFLNDSTNFKLIYRYAFDFAREKDQRSLDINTAKCMLGLLLG-KIWPLFPVFH 236
Query: 192 QFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEY 240
QFL+ K I++D W +LEF+RT++ LSNYD +GAWP L+DEFVE+
Sbjct: 237 QFLEQSKYKVINKDQWCNVLEFSRTINLDLSNYDEDGAWPVLLDEFVEW 285
>sp|Q9BTE7|DCNL5_HUMAN DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=1 SV=1
Length = 237
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 125/200 (62%), Gaps = 7/200 (3%)
Query: 46 SQPQSKSLTDTRHLEEL-----YNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW 100
SQP ++ ++ H + Y P +++ +G+ C D+ V+P++I+MLV++W
Sbjct: 33 SQPPARLISGEEHFSSKKCLAWFYEYAGPD-EVVGPEGMEKFCEDIGVEPENIIMLVLAW 91
Query: 101 HMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKE 160
++A +M F+K+E++ G+ SL D +K + + F+R++L D F+ IY +AF +A++
Sbjct: 92 KLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFARD 151
Query: 161 KGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPA 220
K Q+SL +DTA M LL + WPL + Q+L+ + +++D W +LEF+RTV
Sbjct: 152 KDQRSLDIDTAKSMLALLLG-RTWPLFSVFYQYLEQSKYRVMNKDQWYNVLEFSRTVHAD 210
Query: 221 LSNYDAEGAWPYLIDEFVEY 240
LSNYD +GAWP L+DEFVE+
Sbjct: 211 LSNYDEDGAWPVLLDEFVEW 230
>sp|Q5PPL2|DCNL5_RAT DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d5 PE=2 SV=1
Length = 237
Score = 150 bits (379), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 114/169 (67%), Gaps = 1/169 (0%)
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
+++ +G+ C D+ V+P++I+MLV++W ++A +M F+K+E++ G+ SL D +K +
Sbjct: 63 EVVGPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQ 122
Query: 132 ERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWC 191
R F+R++L D F+ IY +AF +A++K Q+SL +DTA M LL + WPL +
Sbjct: 123 SRFDFLRSQLNDISSFKNIYRYAFDFARDKDQRSLDIDTAKSMLALLLG-RTWPLFSVFY 181
Query: 192 QFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEY 240
Q+L+ + +++D W +LEF+RTV LSNYD +GAWP L+DEFVE+
Sbjct: 182 QYLEQSKYRVMNKDQWYNVLEFSRTVHADLSNYDEDGAWPVLLDEFVEW 230
>sp|Q9CXV9|DCNL5_MOUSE DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=2 SV=1
Length = 237
Score = 150 bits (379), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 114/169 (67%), Gaps = 1/169 (0%)
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
+++ +G+ C D+ V+P++I+MLV++W ++A +M F+K+E++ G+ SL D +K +
Sbjct: 63 EVVGPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQ 122
Query: 132 ERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWC 191
R F+R++L D F+ IY +AF +A++K Q+SL +DTA M LL + WPL +
Sbjct: 123 SRFDFLRSQLNDISSFKNIYRYAFDFARDKDQRSLDIDTAKSMLALLLG-RTWPLFSVFY 181
Query: 192 QFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEY 240
Q+L+ + +++D W +LEF+RTV LSNYD +GAWP L+DEFVE+
Sbjct: 182 QYLEQSKYRVMNKDQWYNVLEFSRTVHADLSNYDEDGAWPVLLDEFVEW 230
>sp|Q8CCA0|DCNL4_MOUSE DCN1-like protein 4 OS=Mus musculus GN=Dcun1d4 PE=2 SV=1
Length = 292
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 110/169 (65%), Gaps = 1/169 (0%)
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
D + +G+ C D+ V+P+++VMLV++W + A M F+ QE++ G+ SL D+ +K R
Sbjct: 118 DAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLR 177
Query: 132 ERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWC 191
+ ++R+ L D F+ IY +AF +A+EK Q+SL ++TA M LL K WPL +
Sbjct: 178 TTLDYLRSLLNDTTNFKLIYRYAFDFAREKDQRSLDINTAKCMLGLLLG-KIWPLFPVFH 236
Query: 192 QFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEY 240
QFL+ K I++D W +LEF+RT+ LSNYD +GAWP L+DEFVE+
Sbjct: 237 QFLEQSKYKVINKDQWCNVLEFSRTISLDLSNYDEDGAWPVLLDEFVEW 285
>sp|P0CN06|DCN1_CRYNJ Defective in cullin neddylation protein 1 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=DCN1 PE=3 SV=1
Length = 279
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 143/268 (53%), Gaps = 33/268 (12%)
Query: 7 SNRDKL--QQFVSITGASEKAALQALKASDWHLEGAFDVFYS-QPQSKS-LTDTRHLEEL 62
S +D L QF +ITG S A + +K H+E A D FY+ +P ++ R L E+
Sbjct: 9 STKDSLLVTQFRAITGTSSAEAAKYIKRYK-HIEAAVDAFYNNEPAPRADPAQERKLGEI 67
Query: 63 YNRYKDPY-LDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
+ ++KDP +I +DG LC +L +DP D V+ ++ + + E+ K F+ G+
Sbjct: 68 WEKFKDPSDPKLIKIDGTMELCEELDIDPGTDAVLFCLAADLGSKATGEWEKAPFVAGIA 127
Query: 121 SL--GIDSLDKFRERISFMRAEL-KDEQKFREIYNFAFAWAKEKGQ---KSLALDTAIGM 174
S IDSL K + + +R +L D + F+++YN AF A+ Q +SL LDTAI +
Sbjct: 128 SYPGNIDSLPKLKAYLPTLRKKLVSDPEYFKKVYNHAFQLARGGPQSLTRSLPLDTAIDL 187
Query: 175 WQLLFAEK-------------------QWPLVDHWCQFLQAKHNKAISRDTWSQLLEFAR 215
W L F P D W +F+Q K NKA+S+DTW+ L++FAR
Sbjct: 188 WTLFFPPAFNHSPSALSHLPDNSPPQFTQPEFDLWIEFMQQK-NKAVSKDTWALLVDFAR 246
Query: 216 TVDPALSNYDAEGAWPYLIDEFVEYLTE 243
+D YD +GAWP +ID+FVEY+ E
Sbjct: 247 GIDKDFKEYDEDGAWPSMIDDFVEYVRE 274
>sp|P0CN07|DCN1_CRYNB Defective in cullin neddylation protein 1 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=DCN1 PE=3 SV=1
Length = 279
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 143/268 (53%), Gaps = 33/268 (12%)
Query: 7 SNRDKL--QQFVSITGASEKAALQALKASDWHLEGAFDVFYS-QPQSKS-LTDTRHLEEL 62
S +D L QF +ITG S A + +K H+E A D FY+ +P ++ R L E+
Sbjct: 9 STKDSLLVTQFRAITGTSSAEAAKYIKRYK-HIEAAVDAFYNNEPAPRADPAQERKLGEI 67
Query: 63 YNRYKDPY-LDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
+ ++KDP +I +DG LC +L +DP D V+ ++ + + E+ K F+ G+
Sbjct: 68 WEKFKDPSDPKLIKIDGTMELCEELDIDPGTDAVLFCLAADLGSKATGEWEKAPFVAGIA 127
Query: 121 SL--GIDSLDKFRERISFMRAEL-KDEQKFREIYNFAFAWAKEKGQ---KSLALDTAIGM 174
S IDSL K + + +R +L D + F+++YN AF A+ Q +SL LDTAI +
Sbjct: 128 SYPGNIDSLPKLKAYLPTLRKKLVSDPEYFKKVYNHAFQLARGGPQSLTRSLPLDTAIDL 187
Query: 175 WQLLFAEK-------------------QWPLVDHWCQFLQAKHNKAISRDTWSQLLEFAR 215
W L F P D W +F+Q K NKA+S+DTW+ L++FAR
Sbjct: 188 WTLFFPPAFNHSPSALSHLPDNSPPQFTQPEFDLWIEFMQQK-NKAVSKDTWALLVDFAR 246
Query: 216 TVDPALSNYDAEGAWPYLIDEFVEYLTE 243
+D YD +GAWP +ID+FVEY+ E
Sbjct: 247 GIDKDFKEYDEDGAWPSMIDDFVEYVRE 274
>sp|Q5RDF9|DCNL5_PONAB DCN1-like protein 5 OS=Pongo abelii GN=DCUN1D5 PE=2 SV=1
Length = 237
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 123/200 (61%), Gaps = 7/200 (3%)
Query: 46 SQPQSKSLTDTRHLEEL-----YNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW 100
SQP ++ ++ H + Y P +++ +G+ C D+ V+P++I+MLV++W
Sbjct: 33 SQPPARLISGEEHFSSKKCLAWFYEYAGPD-EVVGPEGMEKFCEDIGVEPENIIMLVLAW 91
Query: 101 HMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKE 160
++A +M F+K+E++ G+ SL D +K + + F+R++L D F+ IY +AF +A++
Sbjct: 92 KLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFARD 151
Query: 161 KGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPA 220
K Q+SL +DTA M LL + WPL + Q+ + + +++D W +LEF+R V
Sbjct: 152 KDQRSLDIDTAKSMLALLLG-RTWPLFSVFYQYPEQSKYRVMNKDQWYNVLEFSRAVHAD 210
Query: 221 LSNYDAEGAWPYLIDEFVEY 240
LSNYD +GAWP L+DEFVE+
Sbjct: 211 LSNYDEDGAWPVLLDEFVEW 230
>sp|Q54GP1|DCN1L_DICDI DCN1-like protein 1 OS=Dictyostelium discoideum GN=DDB_G0290025
PE=3 SV=1
Length = 249
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 137/250 (54%), Gaps = 9/250 (3%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS-KSLTDTRHL 59
M++L + K +F+SIT A+E A+Q LK + W + A D FYS P + + D + +
Sbjct: 1 MYRLPADQKLKCTEFMSITEATEAKAIQYLKDASWRTDAAVDNFYSNPSNFANKFDKKAI 60
Query: 60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119
E ++N+YKD + I + + D+ ++ + ++ L V W K M +K EF+ +
Sbjct: 61 ETIFNKYKDSGEEQI-SEKLPEFVKDININDE-MMELAVLWKFKTKQMGVITKNEFMETM 118
Query: 120 QSLGIDSLDKFRERISFMR-----AELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGM 174
+ L D++ +++ +R +L + F+E Y F F K + QK+++L I +
Sbjct: 119 ERLRCDNISSLEKQMETVRQQLSSKDLNNNSAFKEFYMFVFDLGKAENQKNVSLQMCIEL 178
Query: 175 WQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLI 234
W ++ K + + W FL H AIS+DTW+ L+F + + +++ YD+EGAWP LI
Sbjct: 179 WTIVLKSK-FDNLQIWFDFLNKHHKLAISKDTWNLFLDFVKIANDSITKYDSEGAWPVLI 237
Query: 235 DEFVEYLTEN 244
DEFVEY EN
Sbjct: 238 DEFVEYYKEN 247
>sp|Q60YT5|DCN1_CAEBR Defective in cullin neddylation protein 1 OS=Caenorhabditis
briggsae GN=dcn-1 PE=3 SV=3
Length = 367
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 134/262 (51%), Gaps = 30/262 (11%)
Query: 12 LQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ-----SKSLTDTRHLEELYNRY 66
L+QFV T A+E +L L ++W++E A ++Y P + + D +L+ +Y
Sbjct: 87 LRQFVQWTQATEPVSLNFLAKANWNIEYAMTLYYDNPNLFSSSAPATVDQSKTIQLFTQY 146
Query: 67 ---KDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123
+D + I G+ L DL +P D +L+++W KA T CEFS QEF G+ SL
Sbjct: 147 VDKRDGLGERIGPHGMQRLLIDLGYEPIDRRVLILAWVFKAETQCEFSLQEFTNGMASLQ 206
Query: 124 IDSLDKFRERISFMRAELK-DEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEK 182
+DS+ +++I + A +K D K R++ F F + K +SL L+ AI W ++F +
Sbjct: 207 VDSIQGLKQKIDALDAGMKADLTKTRDLCIFTFNYGKSAASRSLDLEMAICYWDVIFGAR 266
Query: 183 QWPLVDHWCQFLQAKHNKA--------------------ISRDTWSQLLEFARTVDPALS 222
+ PL+ W FL + A I+RDTW+ +F LS
Sbjct: 267 K-PLMSQWIDFLYGQERMAYARLEEELGPTNAKKVKSVWITRDTWNLFWDFIVLGKEDLS 325
Query: 223 NYDAEGAWPYLIDEFVEYLTEN 244
+YD EGAWP LID+FV++ EN
Sbjct: 326 DYDEEGAWPVLIDQFVDHCREN 347
>sp|Q6C0B6|DCN1_YARLI Defective in cullin neddylation protein 1 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=DCN1 PE=3 SV=1
Length = 240
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 133/236 (56%), Gaps = 8/236 (3%)
Query: 11 KLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPY 70
++++ ++ TG+ EK A AL+ DW++E A D + PQ D +++++Y++
Sbjct: 10 EIRRVMTFTGSKEKTARDALEKFDWNVEVAIDHILNTPQ----VDLSGASKVFDKYRNAD 65
Query: 71 LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKF 130
D I +DG DL + ++ +L V+ + ++ F+++ F+ G ++G D+L
Sbjct: 66 SDEIDLDGTIQYITDLGLSLEEPTVLAVAMTAGSPSVGTFTRKPFVEGWAAIGGDTLPAQ 125
Query: 131 RERI-SFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDH 189
++ SF + F++IY F + + ++GQ+ L +TA+ W+LL K + +D
Sbjct: 126 QKLCRSFAESMTSLNADFQKIYKFTYGFLLQEGQRVLPQETAVDYWRLLLTGK-YEHLDK 184
Query: 190 WCQFLQAKHNKAISRDTWSQLLEFA--RTVDPALSNYDAEGAWPYLIDEFVEYLTE 243
W F+ K+ + ISRD W+ L EF + DP+L +YD +GAWP +IDE+VE+L E
Sbjct: 185 WLSFVTEKYKRNISRDAWNMLYEFMLFQAKDPSLESYDEDGAWPSVIDEYVEFLKE 240
>sp|Q4PF67|DCN1_USTMA Defective in cullin neddylation protein 1 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=DCN1 PE=3 SV=1
Length = 319
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 152/302 (50%), Gaps = 72/302 (23%)
Query: 12 LQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ-------SKSLTDTR------- 57
L+QF +T A+ + A + LKA + +E A D F++ Q S S D +
Sbjct: 11 LRQFRQLTNATPQDANRILKAHGYRIEPATDAFFNNEQAQINASISSSTLDRKSEREVKE 70
Query: 58 HLEELYNRYKDPYLD---------------MILVDGITLLCNDLQVDPQDIVMLVVSWHM 102
L L++R++D D +I + G +C L+V P+D+V L +S+++
Sbjct: 71 RLNALFDRFRDAGADSDEEDDEASQPEDRDLISIGGALKMCEALEVSPEDVVFLPLSYYL 130
Query: 103 KAATMCEFSKQEFIGGLQSLGI-DSLDKFRERISFMRAELKDEQKFR------------- 148
K+A+M F+++ +I G + L + D++DK ++ + +R EL D + R
Sbjct: 131 KSASMGTFTREGYINGWKMLDLSDTIDKQKKTLEKLRQELLDNKPLRLERIAQEKSNPAT 190
Query: 149 ----------EIYNFAFAWAKEKGQKSLALDTAIGMWQLL---------------FAEKQ 183
++Y + +A+A+ +GQKSLAL+ A+ W L+ F + Q
Sbjct: 191 ASGANKGLYEKVYEYTYAFARREGQKSLALENALAFWDLVLPASPTFQRAGSQGTFTQAQ 250
Query: 184 WPLVDHWCQFL-QAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEYLT 242
+D W +FL + +A+S+DTW Q L+F + ++ SN+D + AWP +ID+FV ++
Sbjct: 251 ---LDLWKRFLSEQTRGRAVSKDTWMQFLDFTKEINSDFSNHDFDAAWPSIIDDFVLWVR 307
Query: 243 EN 244
+N
Sbjct: 308 DN 309
>sp|Q86JM4|DCN1M_DICDI DCN1-like protein 2 OS=Dictyostelium discoideum GN=DDB_G0272016
PE=4 SV=1
Length = 267
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 110/198 (55%), Gaps = 7/198 (3%)
Query: 49 QSKSLTDTRHLEELYNRYKDPYLD---MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA 105
+ K++ H LY + +LD I +GI C+D+ + P +LV++W M A+
Sbjct: 66 KGKNIIKAIHYTYLYTYIFNVHLDDDETIGPEGIARFCSDIGLAPDSFEILVLAWTMNAS 125
Query: 106 TMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELK-DEQKFREIYNFAFAWAKE-KGQ 163
M FSK EF G + L L +++++ +LK D KF ++Y +AF +A E + +
Sbjct: 126 KMGYFSKNEFSSGFEKLQCSDLSTLKKQLNSTSQKLKHDSTKFTDLYKYAFGFASEVESK 185
Query: 164 KSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSN 223
KS+ L TA M +LL E P ++ FL + NK+I++D W LEF+RTV LSN
Sbjct: 186 KSVDLGTAAEMLKLLLPE--GPHTTNFAAFLCTQPNKSINKDQWLCFLEFSRTVKADLSN 243
Query: 224 YDAEGAWPYLIDEFVEYL 241
YD AWP L+D+F E++
Sbjct: 244 YDDSEAWPLLLDQFSEWV 261
>sp|Q8WZK4|DCN1_SCHPO Defective in cullin neddylation protein 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dcn1 PE=3 SV=1
Length = 251
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 134/244 (54%), Gaps = 19/244 (7%)
Query: 13 QQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ-PQSKSLTDT-RHLEELYNRYKDPY 70
+ F T S KAAL LK ++ +DV Y++ Q KS + + L +++++
Sbjct: 10 RAFSKATSTSSKAALSWLKKYNFD----YDVAYTKWIQQKSREEAEKQLNNVFSQFSSKE 65
Query: 71 -LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDK 129
D+I +DG L L + +D L+VS+ +K+ M EF ++ F+ G +L SLD+
Sbjct: 66 DKDLIELDGSVQLFTALDISLEDPETLLVSYFLKSPRMGEFHRESFVEGALNLSTTSLDQ 125
Query: 130 FR----ERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWP 185
+ E++ R+ D + IY + + A +KG+K+L+ AI +Q+L + +P
Sbjct: 126 LKLAIKEKVQVWRS---DASLQKAIYIYTYPLACDKGKKTLSTSIAIEFFQILLKD-TFP 181
Query: 186 LVDHWCQFLQAKH--NKAISRDTWSQLLEFARTV--DPALSNYDAEGAWPYLIDEFVEYL 241
L+D W FL+ K++ +DTW++L +F+ V DP SNYD EGAWP LIDEFV Y
Sbjct: 182 LLDDWIAFLKVSPIIEKSLPKDTWNELWDFSVFVKSDPNCSNYDFEGAWPTLIDEFVSYY 241
Query: 242 TENG 245
E+G
Sbjct: 242 REHG 245
>sp|Q52DM9|DCN1_MAGO7 Defective in cullin neddylation protein 1 OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=DCN1 PE=3
SV=1
Length = 281
Score = 97.4 bits (241), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 129/259 (49%), Gaps = 26/259 (10%)
Query: 14 QFVSITGASEKAALQALKASDWHLEGAFDVFY-SQPQSKSLTDTR-HLEELYNRYKDPYL 71
QFV +T ++K A + LK ++W L+ A D ++ S P + + ++ L+++++ +D
Sbjct: 13 QFVHMTATNDKVAQKFLKNANWKLDIAADAYFNSNPNMATSSSSKPKLDKMFSDLQDTQE 72
Query: 72 DMI--LVDGITL-LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLD 128
D L G + + L VDP+ + + V+ +KA ++ F+ G Q+ +
Sbjct: 73 DSPDELGAGSAIEYASSLGVDPESVGIFVLMELVKAPAFGVITRSGFVEGWQATNAPASK 132
Query: 129 KFRERI--SFMRAELKDEQKFREIYNFAFAWAKEKG-QKSLALDTAIGMWQLLFA----- 180
++ S +R +D + F+ +Y AF +E Q++L L+ A+ WQ F
Sbjct: 133 SGQKDYIQSVIRNLPQDHELFKRVYRHAFIAGRETPEQRALPLENALVYWQCFFGPEMPH 192
Query: 181 EKQW-----------PLVDHWCQFLQAKHNKAISRDTWSQLLEFA--RTVDPALSNYDAE 227
K W +D W ++L+ ++ +S+D W+Q L+FA T D LS + E
Sbjct: 193 SKPWVAKSSQSGGTTDFLDLWTEYLKNNWSRTVSKDMWNQTLDFAVKSTADSTLSFWTPE 252
Query: 228 GAWPYLIDEFVEYLTENGI 246
G+WP +ID FVE+L GI
Sbjct: 253 GSWPSVIDGFVEWLRNKGI 271
>sp|Q5AWS1|DCN1_EMENI Defective in cullin neddylation protein 1 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=dcn1 PE=3 SV=1
Length = 308
Score = 97.4 bits (241), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 55/296 (18%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ--PQSKSL----T 54
M + + + ++ QFVS T A+ A + L+ S W+ E A D F ++ P S L
Sbjct: 1 MPPYTAAQKQQITQFVSFTQANNTTAAKFLRQSRWNTEEAIDAFKNRIAPASMGLIFRPC 60
Query: 55 DTRHLEELYNR-------------------------YKDPYL------------DMILVD 77
T + E R Y +L D I ++
Sbjct: 61 ATAGVREAVLRISIFQKLIPGLPAGNDALADWVLYLYGFTFLLKEFRDSPEENPDTIGIE 120
Query: 78 GITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFM 137
G D++V+ ++ L ++ +++ +M EF+++ F+ G +S+ DS+ K + +
Sbjct: 121 GAMRYLGDIEVELDEVTCLAIAELLQSPSMGEFTREGFLNGWRSVQCDSIAKMAAHAANL 180
Query: 138 RAELKDEQK-FREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQ----W-----PLV 187
R + E FR +Y + F +GQ++L + A+ W L F + W P +
Sbjct: 181 RTRIPSEPDLFRRVYRYTFPLCLVQGQRNLQFEIAVEQWNLFFTTPKGGIAWNTTTTPWL 240
Query: 188 DHWCQFLQAKHNKAISRDTWSQLLEFARTV--DPALSNYDAEGAWPYLIDEFVEYL 241
D W +FL+ + K +++D W Q+ F R D A + +GAWP +D+FV ++
Sbjct: 241 DWWVEFLEERGKKPVNKDLWQQVEVFMRKTHEDEAFGWWSEDGAWPGTLDDFVAWV 296
>sp|Q6FJR2|DCN1_CANGA Defective in cullin neddylation protein 1 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=DCN1 PE=3 SV=1
Length = 273
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 132/273 (48%), Gaps = 30/273 (10%)
Query: 4 LSRSNRDKLQQFVSITGAS-EKAALQALKASDWHLEGAFDVFYSQPQSKSLTD--TRH-- 58
+SR ++ ++ F S+T + E A + L A++W++ A + +Y + D RH
Sbjct: 2 VSRHEKELMKTFQSLTSCTDEGKAKRYLSANNWNINYALNEYYDKEVGGFTEDHMIRHQF 61
Query: 59 -----LEELYNRY----KDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATM-C 108
L L+ Y ++ I DG+ DL + +D+V + ++ ++ +
Sbjct: 62 KYPDELVSLFGHYAALIEEDGTQSITPDGLIDYIQDLGYNLEDLVTISLAHFLQCKNLEN 121
Query: 109 EFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQK-FREIYNFAFAWAKEKGQKSLA 167
++++F+ + G +L++ R + +L ++ K F IYN++F K Q +
Sbjct: 122 PITEKQFLYFWYNEGCYTLEQMRHYLEDCERKLCNDWKYFTTIYNYSFDLNASK-QGVVE 180
Query: 168 LDTAIGMWQLLFAEKQWPL----------VDHWCQFLQAKHNKAISRDTWSQLLEFAR-- 215
D AI W+L F E + L +D WC+FLQ +H K I +DTW LL F +
Sbjct: 181 TDIAIEYWKLFFEENRTKLSGIIKVDQAHLDLWCKFLQDEHKKLIHKDTWQMLLLFFKKF 240
Query: 216 -TVDPALSNYDAEGAWPYLIDEFVEYLTENGIV 247
++D + Y+ AWPY IDEF EYL E ++
Sbjct: 241 PSLDAIKTEYNEADAWPYTIDEFYEYLEERNVL 273
>sp|Q12395|DCN1_YEAST Defective in cullin neddylation protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DCN1 PE=1
SV=1
Length = 269
Score = 87.4 bits (215), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 128/261 (49%), Gaps = 26/261 (9%)
Query: 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTD------- 55
K + ++ ++ F S+T K + + L+ + W++ A + +Y + + + TD
Sbjct: 9 KDASPEQEAIESFTSLTKCDPKVSRKYLQRNHWNINYALNDYYDK-EIGTFTDEVSTVAH 67
Query: 56 ----TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCE-F 110
+ L +++ Y + ++ +D + +L + +D+ L ++ + + E
Sbjct: 68 PPVYPKELTQVFEHYINN--NLFDIDSLVKFIEELGYNLEDLATLCLAHLLGYKKLEEPL 125
Query: 111 SKQEFIGGLQSLGIDSLDKFRERISFMRAEL-KDEQKFREIYNFAFAWAKEKGQKSLALD 169
+++F+ G ++ +E I + +L +D Q F +IYN+AF + +K + D
Sbjct: 126 KREDFLSTWFMQGCSTISDMQECIKTLDVKLHEDLQYFTQIYNYAFNLILDPNRKDIDTD 185
Query: 170 TAIGMWQLLFAEKQWP------LVDHWCQFLQAKHNKAISRDTWSQLLEFAR---TVDPA 220
I W+L F + ++P L++ W +FL+ + IS+DTW LL F + T+
Sbjct: 186 EGIQYWKLFF-QPEYPVRMEPDLLEAWFRFLRDEGKTTISKDTWRMLLLFFKRYPTIQKI 244
Query: 221 LSNYDAEGAWPYLIDEFVEYL 241
+S+YD AWP++IDEF E L
Sbjct: 245 ISDYDETAAWPFIIDEFYECL 265
>sp|Q750Y3|DCN1_ASHGO Defective in cullin neddylation protein 1 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=DCN1 PE=3 SV=2
Length = 255
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 118/246 (47%), Gaps = 16/246 (6%)
Query: 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTD--TRHLEELYNRY 66
R+ +++F+++T A+ AA L+ + W L+ A D FY+Q + + L + RY
Sbjct: 7 RELIREFLAVTSATSAAAETYLERNHWSLDHALDDFYTQSGGGGRAEQYSAELVATFERY 66
Query: 67 KDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATM-CEFSKQEFIGGLQSLGID 125
+ + + DL +D+ L ++ +K + + S+ +F+ LG
Sbjct: 67 AAG--GAMDTEALVRYVGDLGFQLEDVATLCLARLLKVEELTADISRFQFLSTWHGLGCS 124
Query: 126 SLDKFRERISFMRAELK-DEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQW 184
SL R + + L+ D FR +Y + F + G + L+++TAI W L F + +
Sbjct: 125 SLPDMRAAVDALELRLRTDAAYFRALYAYTFGLGLDAGGRRLSVETAIAYWSLFFLDHTY 184
Query: 185 ------PLVDHWCQFLQAKHNKAISRDTWSQLLEFA-RTVDPA--LSNYDAEGAWPYLID 235
P + W +FL+A + ++SRDTW FA R D L +Y+ +WP +ID
Sbjct: 185 AVTVPAPRLRSWFEFLRAG-DHSVSRDTWDMFPRFAQRFPDDTELLEHYNELASWPLVID 243
Query: 236 EFVEYL 241
E+ E++
Sbjct: 244 EYYEWV 249
>sp|Q5ADL9|DCN1_CANAL Defective in cullin neddylation protein 1 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=DCN1 PE=3 SV=1
Length = 304
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 137/292 (46%), Gaps = 58/292 (19%)
Query: 6 RSNRDKL-QQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTR------- 57
+S++ +L QQF +TG S A + L++ + L A D +Y++ +K+ +
Sbjct: 9 KSSKTQLRQQFCELTGTSNTTATKYLESVRYDLARAIDNYYNKHPNKAQVTKKPVKVKID 68
Query: 58 -HLEELYNRYKD---PYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
L +++++YKD P + I ++G DL + P I L ++ +K+ F+++
Sbjct: 69 DRLIQIFDKYKDSEDP--NKIDIEGTLTYLGDLGISPDQIESLSLALLLKSPKTGVFTRE 126
Query: 114 EFIG---GLQSLGIDSLDKFRERIS---------FMR-AELKDEQ------KFREIYNFA 154
F+ Q I ++ +F R + F + + D++ KF+++YNF
Sbjct: 127 NFLHIWQYYQCFDIGAMSEFITRFNKDLVNNIGGFKDISTVSDDENKSVPLKFQDLYNFT 186
Query: 155 FAWAKE-KGQKSLALDTAIGMWQLL-----------------FAEKQWPLVDHWCQFL-- 194
F ++ E + QK L LDTAI W+LL F V+ W +FL
Sbjct: 187 FKFSLETESQKFLDLDTAIEYWKLLLPIITETYSKDNKLDEEFKNHVNERVEQWFKFLTD 246
Query: 195 -QAKHNKAISRDTWSQLLEFARTV---DP-ALSNYDAEGAWPYLIDEFVEYL 241
+ K+IS D+WS F + + DP +YD AWP ++DEF+EYL
Sbjct: 247 TEYMTKKSISYDSWSMFYLFFKEIVLIDPIKFKDYDEMAAWPSVVDEFLEYL 298
>sp|F1NW29|TYDP2_CHICK Tyrosyl-DNA phosphodiesterase 2 OS=Gallus gallus GN=TDP2 PE=3
SV=2
Length = 369
Score = 35.8 bits (81), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLT 54
+L++ + +F ++T + E A L S WHLE A D ++ P ++ T
Sbjct: 28 RLAKRRKVLCSEFAAVTSSDEAVASGFLAGSGWHLERALDAYFEAPMNEQTT 79
>sp|Q9XWG3|TYDP2_CAEEL 5'-tyrosyl-DNA phosphodiesterase OS=Caenorhabditis elegans
GN=Y63D3A.4 PE=1 SV=1
Length = 362
Score = 34.7 bits (78), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 5 SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS 46
S S+ KL +F IT E A L+ DW L+ A DVFY
Sbjct: 42 SMSDEQKLHEFAIITATDEAFAQSILQDVDWDLKKALDVFYG 83
>sp|Q6ZTY8|CL063_HUMAN Putative uncharacterized protein C12orf63 OS=Homo sapiens
GN=C12orf63 PE=2 SV=2
Length = 1197
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 62/150 (41%), Gaps = 12/150 (8%)
Query: 102 MKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKE- 160
+K E+S+ + + + D+L FRE + + + + R++ + A ++
Sbjct: 273 LKMLISSEYSRAKALVCVPVDVTDTLRCFRETLEKSKYHNRSIRHSRKLLSLFLAQTQDV 332
Query: 161 ---KGQKSLALDTAIGMWQLL-FAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFART 216
Q+SL + + LL FAEK+ WCQ L K TW EF
Sbjct: 333 LQASNQRSLKVQALHSLGSLLIFAEKKRAAFKCWCQALDDIFRKPDVLHTWK---EFG-- 387
Query: 217 VDPALSNYDAEGAWPYLIDEFVEYLTENGI 246
P+L+N + P D E+L+ GI
Sbjct: 388 --PSLTNVTNSHSPPGFKDYSEEFLSRVGI 415
>sp|B8FB83|PURA_DESAA Adenylosuccinate synthetase OS=Desulfatibacillum alkenivorans
(strain AK-01) GN=purA PE=3 SV=1
Length = 430
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 92 DIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI-DSLDKFRERISFMRAELKDEQKFREI 150
D+V+L + + T +K + +GGL SL I + + E ++F A+LK K + +
Sbjct: 311 DMVLLEATARLNGLTGVAITKLDVLGGLDSLNICTAYECEGETLNFFPADLKVLAKCKPV 370
Query: 151 YNFAFAWAKE 160
Y W ++
Sbjct: 371 YETMPGWTED 380
>sp|Q03MY7|SYR_STRTD Arginine--tRNA ligase OS=Streptococcus thermophilus (strain ATCC
BAA-491 / LMD-9) GN=argS PE=3 SV=1
Length = 563
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 157 WAKEKGQKSLALDTAIGMWQLLFAEKQW-PLVDH----WCQFLQAKHNKAISRDTW---S 208
W E+ K+ ++ + ++ + AE + P VD W + L+A +A + W
Sbjct: 175 WGSEEAVKANPINELLQLYVRINAEAEEDPSVDEEAREWFRKLEAGDEEATALWQWFRDE 234
Query: 209 QLLEFARTVDP---ALSNYDAEGAWPYLIDEFVEYLTENGIVQ 248
L+EF R D + +Y+ E + +DE V+ LTE G++Q
Sbjct: 235 SLVEFNRLYDELGVSFDSYNGEAFYNDKMDEVVDILTEKGLLQ 277
>sp|Q5M1Z3|SYR_STRT1 Arginine--tRNA ligase OS=Streptococcus thermophilus (strain CNRZ
1066) GN=argS PE=3 SV=1
Length = 563
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 157 WAKEKGQKSLALDTAIGMWQLLFAEKQW-PLVDH----WCQFLQAKHNKAISRDTW---S 208
W E+ K+ ++ + ++ + AE + P VD W + L+A +A + W
Sbjct: 175 WGSEEAVKANPINELLQLYVRINAEAEEDPSVDEEAREWFRKLEAGDEEATALWQWFRDE 234
Query: 209 QLLEFARTVDP---ALSNYDAEGAWPYLIDEFVEYLTENGIVQ 248
L+EF R D + +Y+ E + +DE V+ LTE G++Q
Sbjct: 235 SLVEFNRLYDELGVSFDSYNGEAFYNDKMDEVVDILTEKGLLQ 277
>sp|O35987|NSF1C_RAT NSFL1 cofactor p47 OS=Rattus norvegicus GN=Nsfl1c PE=1 SV=1
Length = 370
Score = 31.2 bits (69), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45
++ +D L++FV++TGA E A L+++ W L+ A FY
Sbjct: 1 MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFY 42
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,293,562
Number of Sequences: 539616
Number of extensions: 3386185
Number of successful extensions: 9020
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 8889
Number of HSP's gapped (non-prelim): 58
length of query: 250
length of database: 191,569,459
effective HSP length: 115
effective length of query: 135
effective length of database: 129,513,619
effective search space: 17484338565
effective search space used: 17484338565
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)