Query 025620
Match_columns 250
No_of_seqs 147 out of 436
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 14:04:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025620.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025620hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bq3_A Defective in cullin ned 100.0 1.6E-84 5.5E-89 585.1 22.0 240 3-245 10-270 (270)
2 3kev_A Galieria sulfuraria DCU 100.0 8.7E-76 3E-80 507.3 21.4 196 53-250 3-198 (199)
3 3tdu_A DCN1-like protein 1; E2 100.0 9.8E-75 3.4E-79 501.0 21.1 194 55-249 2-196 (200)
4 4gba_A DCN1-like protein 3; E3 100.0 4E-74 1.4E-78 503.2 21.5 198 53-250 2-203 (221)
5 2dam_A ETEA protein; KIAA0887, 99.4 2.1E-13 7.2E-18 98.3 5.2 52 1-52 11-63 (67)
6 2dal_A Protein KIAA0794; FAS a 99.4 6.5E-13 2.2E-17 94.3 5.2 48 3-50 10-57 (62)
7 1v92_A NSFL1 cofactor P47; 3-h 99.3 8.8E-13 3E-17 87.7 4.8 43 6-48 3-45 (46)
8 3e21_A HFAF1, FAS-associated f 99.3 2.4E-12 8.1E-17 85.7 3.7 42 5-46 2-44 (45)
9 2dzl_A Protein FAM100B; UBA-li 99.2 1.4E-11 4.9E-16 88.4 5.2 43 8-50 16-59 (66)
10 2jp7_A MRNA export factor MEX6 98.0 7.2E-06 2.5E-10 56.9 4.8 45 3-47 1-45 (57)
11 1oai_A Nuclear RNA export fact 97.9 1E-05 3.6E-10 56.5 4.5 45 3-47 2-46 (59)
12 4gew_A 5'-tyrosyl-DNA phosphod 97.7 1.4E-05 4.8E-10 73.4 3.2 42 7-48 44-85 (362)
13 1z96_A DNA-damage, UBA-domain 97.6 8E-05 2.7E-09 47.1 4.4 39 6-45 2-40 (40)
14 1wj7_A Hypothetical protein (R 97.3 0.00016 5.3E-09 55.9 4.1 42 7-48 38-79 (104)
15 2l2d_A OTU domain-containing p 96.9 0.0015 5.1E-08 46.1 5.0 43 4-46 13-55 (73)
16 2znd_A Programmed cell death p 96.7 0.0072 2.4E-07 47.8 8.9 69 53-121 3-72 (172)
17 3sjs_A URE3-BP sequence specif 96.6 0.017 5.7E-07 48.5 10.5 160 56-242 50-216 (220)
18 1y1x_A Leishmania major homolo 96.6 0.036 1.2E-06 44.9 12.2 67 55-121 25-91 (191)
19 4ds7_A Calmodulin, CAM; protei 96.5 0.085 2.9E-06 39.7 13.0 66 56-121 10-75 (147)
20 3ox6_A Calcium-binding protein 96.4 0.044 1.5E-06 41.5 11.3 68 56-123 10-77 (153)
21 3qrx_A Centrin; calcium-bindin 96.4 0.14 4.8E-06 39.7 14.1 66 56-121 27-92 (169)
22 2mys_C Myosin; muscle protein, 96.3 0.13 4.5E-06 38.7 13.3 66 56-122 7-75 (149)
23 3fwb_A Cell division control p 96.2 0.077 2.6E-06 40.7 11.8 66 56-121 22-87 (161)
24 2b1u_A Calmodulin-like protein 96.1 0.009 3.1E-07 40.2 5.1 68 54-121 3-70 (71)
25 1jkg_B TAP; NTF2-like domain, 96.1 0.00092 3.1E-08 58.9 0.0 47 4-50 194-240 (250)
26 1ify_A HHR23A, UV excision rep 96.1 0.0068 2.3E-07 40.3 4.1 40 7-47 7-46 (49)
27 1dv0_A DNA repair protein HHR2 96.0 0.0022 7.4E-08 42.5 1.6 43 5-48 1-43 (47)
28 1tiz_A Calmodulin-related prot 95.9 0.023 7.8E-07 37.5 6.4 64 58-121 2-65 (67)
29 2g3q_A Protein YBL047C; endocy 95.9 0.0077 2.6E-07 38.7 3.7 39 8-47 4-42 (43)
30 1top_A Troponin C; contractIle 95.9 0.17 5.8E-06 38.7 12.3 67 56-122 19-85 (162)
31 1vg5_A RSGI RUH-014, rhomboid 95.8 0.0096 3.3E-07 43.1 4.3 43 5-48 26-68 (73)
32 1dtl_A Cardiac troponin C; hel 95.8 0.12 4.1E-06 39.6 10.9 67 56-122 17-84 (161)
33 2ktg_A Calmodulin, putative; e 95.7 0.039 1.3E-06 38.5 7.2 67 56-122 13-79 (85)
34 2bl0_C Myosin regulatory light 95.7 0.1 3.5E-06 39.3 10.1 66 56-121 5-70 (142)
35 1alv_A Calpain, S-camld; calci 95.7 0.066 2.3E-06 42.2 9.3 64 57-121 4-75 (173)
36 1avs_A Troponin C; muscle cont 95.7 0.053 1.8E-06 38.4 7.9 67 56-122 19-85 (90)
37 2jy5_A Ubiquilin-1; UBA, alter 95.6 0.012 4.3E-07 39.5 4.0 39 9-48 13-52 (52)
38 2f2o_A Calmodulin fused with c 95.6 0.38 1.3E-05 37.6 13.5 67 56-122 10-76 (179)
39 1veg_A NEDD8 ultimate buster-1 95.6 0.015 5.2E-07 43.0 4.6 40 8-48 29-68 (83)
40 1qx2_A Vitamin D-dependent cal 95.6 0.037 1.3E-06 37.5 6.5 68 55-122 3-74 (76)
41 2obh_A Centrin-2; DNA repair c 95.6 0.55 1.9E-05 35.7 14.0 66 56-121 5-70 (143)
42 2kn2_A Calmodulin; S MAPK phos 95.5 0.092 3.1E-06 37.1 8.6 71 55-125 7-77 (92)
43 2joj_A Centrin protein; N-term 95.5 0.041 1.4E-06 37.5 6.4 66 56-121 6-71 (77)
44 2opo_A Polcalcin CHE A 3; calc 95.3 0.13 4.5E-06 35.8 8.9 66 56-122 10-75 (86)
45 2jnf_A Troponin C; stretch act 95.3 0.16 5.6E-06 38.8 10.3 68 56-123 12-80 (158)
46 2bl0_B Myosin regulatory light 95.3 0.19 6.5E-06 37.6 10.4 65 55-122 3-67 (145)
47 2lmt_A Calmodulin-related prot 95.2 0.27 9.1E-06 37.9 11.3 120 1-120 1-146 (148)
48 2kz2_A Calmodulin, CAM; TR2C, 95.2 0.13 4.5E-06 37.2 8.8 67 54-120 26-92 (94)
49 2knz_A Ubiquilin-4; cytoplasm, 95.1 0.02 6.9E-07 38.6 3.7 39 9-48 12-51 (53)
50 1nya_A Calerythrin; EF-hand, m 95.1 0.51 1.7E-05 36.4 12.6 70 56-125 6-90 (176)
51 1c7v_A CAVP, calcium vector pr 94.9 0.055 1.9E-06 37.4 5.8 69 55-124 7-76 (81)
52 2lv7_A Calcium-binding protein 94.9 0.095 3.3E-06 39.0 7.4 64 56-119 35-98 (100)
53 1wji_A Tudor domain containing 94.9 0.03 1E-06 39.1 4.3 40 8-48 9-48 (63)
54 2dah_A Ubiquilin-3; UBA domain 94.9 0.02 6.7E-07 38.9 3.2 41 9-50 10-51 (54)
55 2dkl_A Trinucleotide repeat co 94.9 0.033 1.1E-06 41.3 4.7 39 9-48 22-60 (85)
56 2aao_A CDPK, calcium-dependent 94.9 0.28 9.7E-06 37.7 10.5 67 56-122 26-92 (166)
57 1yx7_A Calsensin, LAN3-6 antig 94.8 0.096 3.3E-06 36.2 6.8 68 55-122 5-78 (83)
58 1jba_A GCAP-2, protein (guanyl 94.8 0.73 2.5E-05 37.0 13.2 100 55-154 20-124 (204)
59 3k21_A PFCDPK3, calcium-depend 94.8 0.82 2.8E-05 36.8 13.4 68 55-123 50-117 (191)
60 3mse_B Calcium-dependent prote 94.7 0.32 1.1E-05 38.7 10.7 78 56-135 38-115 (180)
61 2dak_A Ubiquitin carboxyl-term 94.7 0.03 1E-06 38.9 3.9 40 8-48 9-48 (63)
62 1k9u_A Polcalcin PHL P 7; poll 94.7 0.095 3.2E-06 35.8 6.5 65 57-122 3-67 (78)
63 1juo_A Sorcin; calcium-binding 94.7 0.18 6.1E-06 40.8 9.2 66 56-122 32-102 (198)
64 1exr_A Calmodulin; high resolu 94.7 1 3.5E-05 34.1 14.5 66 56-121 9-74 (148)
65 1wgn_A UBAP1, ubiquitin associ 94.7 0.028 9.7E-07 39.3 3.5 47 3-50 14-60 (63)
66 1wiv_A UBP14, ubiquitin-specif 94.7 0.039 1.3E-06 39.7 4.4 41 8-49 29-69 (73)
67 1j7q_A CAVP, calcium vector pr 94.6 0.14 4.8E-06 35.7 7.4 65 56-121 13-80 (86)
68 2ccm_A Calexcitin; EF hand, ca 94.5 0.71 2.4E-05 36.5 12.2 67 56-122 11-93 (191)
69 1ggw_A Protein (CDC4P); light 94.5 0.37 1.3E-05 36.1 9.9 65 55-123 3-67 (140)
70 1wlz_A DJBP, CAP-binding prote 94.3 0.16 5.4E-06 36.9 7.3 72 56-127 23-94 (105)
71 2hpk_A Photoprotein berovin; s 94.3 0.85 2.9E-05 36.8 12.4 65 56-120 35-108 (208)
72 1top_A Troponin C; contractIle 94.2 0.19 6.6E-06 38.4 8.0 66 57-122 96-161 (162)
73 1k94_A Grancalcin; penta-EF-ha 94.2 0.74 2.5E-05 35.6 11.6 59 63-121 5-68 (165)
74 1gjy_A Sorcin, CP-22, V19; cal 94.2 0.44 1.5E-05 37.1 10.3 61 62-122 6-71 (167)
75 1qv0_A Obelin, OBL; photoprote 94.2 1.1 3.6E-05 35.4 12.6 67 56-122 19-95 (195)
76 2mys_B Myosin; muscle protein, 94.1 1.5 5E-05 33.7 13.1 63 56-122 24-87 (166)
77 3e3r_A Calcyphosin, calcyphosi 94.1 0.35 1.2E-05 38.7 9.6 69 55-123 35-103 (204)
78 3fwb_A Cell division control p 94.1 0.2 7E-06 38.2 7.8 64 57-120 96-159 (161)
79 2f33_A Calbindin; EF-hand, Ca2 94.0 0.62 2.1E-05 38.6 11.3 69 53-121 12-86 (263)
80 3j04_B Myosin regulatory light 94.0 0.28 9.7E-06 36.7 8.4 63 57-123 7-69 (143)
81 1jfj_A Ehcabp, calcium-binding 93.9 0.6 2.1E-05 34.0 10.0 63 59-121 2-64 (134)
82 2ekk_A UBA domain from E3 ubiq 93.9 0.074 2.5E-06 34.7 4.2 39 8-48 9-47 (47)
83 2d58_A Allograft inflammatory 93.9 0.16 5.3E-06 37.3 6.6 68 56-123 31-98 (107)
84 2pvb_A Protein (parvalbumin); 93.8 0.44 1.5E-05 34.4 9.0 66 55-120 39-107 (108)
85 3akb_A Putative calcium bindin 93.8 1.7 5.7E-05 33.0 14.0 68 56-123 3-85 (166)
86 1fpw_A Yeast frequenin, calciu 93.8 0.63 2.1E-05 36.7 10.5 109 8-121 9-127 (190)
87 3li6_A Calcium-binding protein 93.7 0.027 9.3E-07 37.2 1.9 64 59-122 2-65 (66)
88 5pal_A Parvalbumin; calcium-bi 93.7 0.29 9.8E-06 35.5 7.8 67 55-121 39-108 (109)
89 2r2i_A Guanylyl cyclase-activa 93.7 0.53 1.8E-05 37.7 10.0 80 57-136 14-96 (198)
90 3ll8_B Calcineurin subunit B t 93.7 1.7 5.7E-05 32.6 12.5 66 56-125 5-70 (155)
91 1pva_A Parvalbumin; calcium bi 93.6 0.52 1.8E-05 34.1 9.0 67 55-121 40-109 (110)
92 2mys_B Myosin; muscle protein, 93.6 1 3.6E-05 34.6 11.3 67 55-121 93-159 (166)
93 3fs7_A Parvalbumin, thymic; ca 93.6 0.54 1.8E-05 34.0 9.1 66 55-120 40-108 (109)
94 2cp9_A EF-TS, EF-TSMT, elongat 93.6 0.062 2.1E-06 37.8 3.6 37 9-45 10-46 (64)
95 2lmt_A Calmodulin-related prot 93.6 1.5 5E-05 33.6 12.1 77 57-133 10-88 (148)
96 2pmy_A RAS and EF-hand domain- 93.6 0.24 8.2E-06 35.3 7.0 65 56-122 26-90 (91)
97 3rm1_A Protein S100-B; alpha-h 93.5 0.37 1.3E-05 34.7 7.9 67 56-122 8-81 (92)
98 3ll8_B Calcineurin subunit B t 93.5 0.2 6.7E-06 38.0 6.7 79 58-136 39-120 (155)
99 1y1x_A Leishmania major homolo 93.4 0.54 1.8E-05 37.7 9.6 65 57-121 93-157 (191)
100 1k2h_A S100A1, S-100 protein, 93.4 0.22 7.6E-06 35.1 6.4 67 56-122 8-81 (93)
101 2jnf_A Troponin C; stretch act 93.3 0.63 2.1E-05 35.4 9.5 118 3-137 6-136 (158)
102 2qac_A Myosin A tail domain in 93.3 0.69 2.4E-05 34.8 9.7 76 57-136 14-92 (146)
103 1wdc_C Scallop myosin; calcium 93.3 0.25 8.6E-06 37.7 7.2 78 56-134 8-90 (156)
104 2ovk_B RLC, myosin regulatory 93.3 0.9 3.1E-05 34.5 10.4 66 55-121 83-148 (153)
105 3ox6_A Calcium-binding protein 93.3 0.26 8.8E-06 37.1 7.2 118 3-120 4-152 (153)
106 1k8u_A S100A6, calcyclin, CACY 93.3 0.19 6.6E-06 35.0 6.0 66 57-122 10-80 (90)
107 2ovk_C Myosin catalytic light 93.2 0.51 1.8E-05 36.1 8.8 66 56-122 8-75 (159)
108 1rro_A RAT oncomodulin; calciu 93.1 0.58 2E-05 33.7 8.6 66 55-120 39-107 (108)
109 1wr1_B Ubiquitin-like protein 93.1 0.094 3.2E-06 36.1 3.9 39 9-48 18-57 (58)
110 1bjf_A Neurocalcin delta; calc 93.1 0.95 3.2E-05 35.7 10.6 81 55-135 23-106 (193)
111 2znd_A Programmed cell death p 93.0 0.72 2.5E-05 35.9 9.6 66 57-122 74-139 (172)
112 1uhk_A Aequorin 2, aequorin; E 93.0 1.8 6.2E-05 33.7 12.0 67 56-122 15-91 (191)
113 1rwy_A Parvalbumin alpha; EF-h 92.9 0.39 1.3E-05 34.7 7.4 67 55-121 39-108 (109)
114 4ds7_A Calmodulin, CAM; protei 92.9 0.3 1E-05 36.5 7.0 33 3-35 4-42 (147)
115 3qrx_A Centrin; calcium-bindin 92.9 0.39 1.3E-05 37.0 7.8 65 57-121 101-165 (169)
116 1s6c_A KV4 potassium channel-i 92.8 0.88 3E-05 35.6 10.0 50 73-122 35-85 (183)
117 1bu3_A Calcium-binding protein 92.8 0.7 2.4E-05 33.3 8.6 66 55-120 40-108 (109)
118 1q80_A SCP, sarcoplasmic calci 92.8 2.6 8.8E-05 32.3 13.4 67 56-124 5-84 (174)
119 2bwb_A Ubiquitin-like protein 92.7 0.13 4.4E-06 33.6 3.9 37 9-46 8-45 (46)
120 1cb1_A Calbindin D9K; calcium- 92.7 0.26 8.8E-06 33.3 5.8 66 55-122 5-76 (78)
121 2l2e_A Calcium-binding protein 92.7 1.2 4.1E-05 35.0 10.7 109 8-121 9-127 (190)
122 2d8n_A Recoverin; structural g 92.7 1 3.4E-05 36.2 10.3 51 73-124 15-65 (207)
123 3h4s_E KCBP interacting Ca2+-b 92.7 0.23 7.8E-06 38.1 6.1 68 56-123 39-107 (135)
124 1wdc_C Scallop myosin; calcium 92.4 0.49 1.7E-05 36.1 7.6 66 56-121 83-150 (156)
125 2ovk_C Myosin catalytic light 92.4 0.63 2.1E-05 35.6 8.3 68 55-122 83-152 (159)
126 2dai_A Ubadc1, ubiquitin assoc 92.3 0.15 5.1E-06 37.5 4.2 40 8-48 29-68 (83)
127 3bow_A Calpain-2 catalytic sub 92.1 0.96 3.3E-05 44.9 11.2 66 56-122 531-604 (714)
128 2mys_C Myosin; muscle protein, 92.1 2.5 8.6E-05 31.3 11.2 81 55-136 42-129 (149)
129 1w7j_B Myosin light chain 1; m 92.0 0.13 4.5E-06 39.0 3.9 68 56-123 9-78 (151)
130 2cpw_A CBL-interacting protein 92.0 0.19 6.6E-06 35.0 4.4 39 9-48 20-59 (64)
131 3dtp_E RLC, myosin regulatory 92.0 1.5 5.1E-05 35.3 10.5 76 56-135 56-133 (196)
132 2bl0_B Myosin regulatory light 91.9 0.48 1.7E-05 35.3 7.0 67 55-121 74-140 (145)
133 1m45_A MLC1P, myosin light cha 91.9 0.37 1.3E-05 36.3 6.4 67 55-121 81-147 (148)
134 3u0k_A Rcamp; fluorescent prot 91.9 2.2 7.5E-05 40.4 12.8 65 57-121 302-366 (440)
135 3pm8_A PFCDPK2, calcium-depend 91.8 0.49 1.7E-05 38.4 7.4 66 56-121 56-121 (197)
136 1s1e_A KV channel interacting 91.8 2 6.8E-05 35.6 11.3 68 55-122 87-154 (224)
137 3j04_B Myosin regulatory light 91.8 0.29 9.9E-06 36.7 5.6 100 22-121 25-140 (143)
138 2obh_A Centrin-2; DNA repair c 91.8 0.6 2.1E-05 35.5 7.4 62 58-119 80-141 (143)
139 1s6c_A KV4 potassium channel-i 91.6 2.4 8.2E-05 33.0 11.1 68 54-121 53-120 (183)
140 3sjs_A URE3-BP sequence specif 91.6 1.3 4.3E-05 36.8 9.9 64 55-124 85-148 (220)
141 1s6j_A CDPK, calcium-dependent 91.6 0.14 4.7E-06 35.7 3.3 64 56-119 22-85 (87)
142 3i5g_B Myosin regulatory light 91.6 2.9 9.9E-05 32.6 11.5 66 55-121 83-148 (153)
143 1vej_A Riken cDNA 4931431F19; 91.6 0.32 1.1E-05 35.0 5.2 40 9-49 30-70 (74)
144 1wdc_B Scallop myosin; calcium 91.6 3.5 0.00012 31.1 11.8 76 56-135 17-94 (156)
145 2sas_A Sarcoplasmic calcium-bi 91.4 2.8 9.5E-05 32.3 11.2 67 56-122 7-89 (185)
146 1m45_A MLC1P, myosin light cha 91.4 0.18 6.1E-06 38.1 4.0 65 58-122 5-70 (148)
147 1nya_A Calerythrin; EF-hand, m 91.4 1.1 3.8E-05 34.5 8.7 76 61-137 62-145 (176)
148 2f2o_A Calmodulin fused with c 91.3 0.44 1.5E-05 37.2 6.4 122 3-124 4-151 (179)
149 1bjf_A Neurocalcin delta; calc 91.3 3.8 0.00013 32.1 12.1 115 7-122 8-128 (193)
150 2d8n_A Recoverin; structural g 91.3 3 0.0001 33.3 11.6 101 55-155 31-137 (207)
151 1g8i_A Frequenin, neuronal cal 91.3 2.9 9.8E-05 32.7 11.3 83 55-137 23-108 (190)
152 1xk4_A Calgranulin A; S100 fam 91.3 0.29 1E-05 35.0 4.9 65 56-122 9-78 (93)
153 2ggz_A Guanylyl cyclase-activa 91.1 0.54 1.8E-05 38.4 7.0 83 55-137 17-102 (211)
154 2jul_A Calsenilin; EF-hand, ca 91.1 1.2 4E-05 37.7 9.3 67 56-122 128-194 (256)
155 2y5i_A S100Z, S100 calcium bin 91.1 0.73 2.5E-05 33.9 7.0 67 56-122 9-82 (99)
156 2lnk_A Protein S100-A4; EF-han 91.0 1.2 4E-05 34.1 8.4 67 56-122 21-94 (113)
157 3sg6_A Gcamp2, myosin light ch 90.9 2.8 9.7E-05 39.6 12.6 66 57-122 312-377 (450)
158 2jjz_A Ionized calcium-binding 90.9 0.66 2.3E-05 36.2 7.1 67 56-122 49-115 (150)
159 2l2e_A Calcium-binding protein 90.9 3.5 0.00012 32.2 11.5 83 55-137 23-108 (190)
160 1wy9_A Allograft inflammatory 90.7 0.58 2E-05 36.5 6.5 67 56-122 47-113 (147)
161 1fi6_A EH domain protein REPS1 90.6 0.61 2.1E-05 33.5 6.1 65 56-122 8-72 (92)
162 1qjt_A EH1, epidermal growth f 90.6 0.75 2.6E-05 33.8 6.7 65 56-122 10-74 (99)
163 2cwb_A Chimera of immunoglobul 90.6 0.22 7.6E-06 38.4 3.8 41 9-49 67-107 (108)
164 1dtl_A Cardiac troponin C; hel 90.6 0.37 1.3E-05 36.7 5.2 87 21-124 36-126 (161)
165 2ovk_B RLC, myosin regulatory 90.6 1.2 4.1E-05 33.7 8.1 63 56-122 15-77 (153)
166 1c07_A Protein (epidermal grow 90.4 0.68 2.3E-05 33.5 6.2 65 56-122 9-73 (95)
167 1exr_A Calmodulin; high resolu 90.3 1.4 4.9E-05 33.2 8.3 81 56-136 45-127 (148)
168 1alv_A Calpain, S-camld; calci 90.3 1.8 6E-05 33.7 9.1 64 57-121 77-140 (173)
169 3n22_A Protein S100-A2; EF-han 90.3 1.3 4.4E-05 32.7 7.8 68 56-123 10-84 (98)
170 1g8i_A Frequenin, neuronal cal 90.3 1.4 4.9E-05 34.5 8.6 111 7-122 8-128 (190)
171 1s6i_A CDPK, calcium-dependent 90.3 0.48 1.6E-05 38.2 5.8 68 56-123 9-76 (188)
172 1whc_A RSGI RUH-027, UBA/UBX 3 90.3 0.14 4.8E-06 35.7 2.2 39 9-48 10-49 (64)
173 1qls_A S100C protein, calgizza 90.2 0.83 2.8E-05 32.5 6.5 67 56-122 12-85 (99)
174 1uhk_A Aequorin 2, aequorin; E 90.2 0.9 3.1E-05 35.6 7.3 62 61-122 113-174 (191)
175 3khe_A Calmodulin-like domain 90.1 1.2 4E-05 35.0 7.9 67 55-121 38-115 (191)
176 2bec_A Calcineurin B homologou 90.1 0.64 2.2E-05 37.3 6.5 68 56-123 113-185 (202)
177 2kgr_A Intersectin-1; structur 90.1 0.94 3.2E-05 34.0 7.0 65 56-122 13-77 (111)
178 2bl0_C Myosin regulatory light 90.1 0.63 2.2E-05 34.7 6.0 84 55-138 40-125 (142)
179 1gjy_A Sorcin, CP-22, V19; cal 90.0 2.2 7.4E-05 33.0 9.3 64 57-122 72-135 (167)
180 2dag_A Ubiquitin carboxyl-term 89.9 0.27 9.2E-06 35.3 3.5 40 8-48 9-49 (74)
181 1wdc_B Scallop myosin; calcium 89.7 1.1 3.9E-05 34.0 7.4 65 56-121 86-150 (156)
182 3akb_A Putative calcium bindin 89.6 1.4 4.9E-05 33.3 7.9 63 58-122 99-161 (166)
183 3nso_A Protein S100-A3; EF-han 89.6 1.2 4.2E-05 33.2 7.3 67 56-122 9-82 (101)
184 3dd4_A KV channel-interacting 89.6 5.6 0.00019 32.8 12.2 68 56-123 63-132 (229)
185 1ggw_A Protein (CDC4P); light 89.5 1 3.5E-05 33.5 6.9 64 56-120 75-138 (140)
186 1qv0_A Obelin, OBL; photoprote 89.5 0.95 3.3E-05 35.6 6.9 63 61-123 117-179 (195)
187 2bec_A Calcineurin B homologou 89.4 2.3 7.8E-05 34.0 9.3 65 56-124 28-92 (202)
188 1j55_A S-100P protein; metal b 89.3 1.3 4.3E-05 32.2 7.0 67 56-122 8-81 (95)
189 1k94_A Grancalcin; penta-EF-ha 89.2 1.7 5.8E-05 33.5 8.1 63 57-121 70-132 (165)
190 2ooa_A E3 ubiquitin-protein li 89.2 0.5 1.7E-05 31.8 4.1 34 9-43 12-45 (52)
191 1s1e_A KV channel interacting 89.1 5.8 0.0002 32.7 11.8 71 54-124 48-120 (224)
192 1iq3_A Ralbp1-interacting prot 89.0 1.2 4.1E-05 33.5 6.8 66 55-122 20-85 (110)
193 1fpw_A Yeast frequenin, calciu 89.0 6.8 0.00023 30.4 11.9 84 54-137 22-108 (190)
194 1dgu_A Calcium-saturated CIB; 88.9 2.3 8E-05 33.3 8.8 64 57-124 20-92 (183)
195 1jba_A GCAP-2, protein (guanyl 88.8 3.2 0.00011 33.2 9.8 69 54-122 56-124 (204)
196 3e3r_A Calcyphosin, calcyphosi 88.8 1.5 5.3E-05 34.7 7.8 69 54-122 70-138 (204)
197 1vek_A UBP14, ubiquitin-specif 88.7 0.46 1.6E-05 34.9 4.1 40 8-48 29-69 (84)
198 2i7a_A Calpain 13; calcium-dep 88.5 2.2 7.5E-05 34.3 8.6 63 57-121 76-142 (174)
199 2kax_A Protein S100-A5; EF-han 88.4 1.6 5.3E-05 31.3 6.9 66 56-123 9-80 (92)
200 2qac_A Myosin A tail domain in 88.4 1.4 4.9E-05 33.0 7.0 62 56-119 83-144 (146)
201 1otr_A Protein CUE2; protein-p 88.4 0.83 2.8E-05 30.3 4.8 41 7-47 3-44 (49)
202 2d9s_A CBL E3 ubiquitin protei 88.4 0.7 2.4E-05 31.2 4.4 38 8-46 9-46 (53)
203 2f33_A Calbindin; EF-hand, Ca2 88.3 7.2 0.00025 31.9 11.9 68 54-121 100-175 (263)
204 1a4p_A S100A10; S100 family, E 88.1 0.61 2.1E-05 34.0 4.5 66 56-122 8-78 (96)
205 2ct9_A Calcium-binding protein 87.9 1.2 4E-05 36.0 6.6 71 55-125 111-186 (208)
206 2r2i_A Guanylyl cyclase-activa 87.7 3.3 0.00011 32.9 9.1 67 57-123 52-118 (198)
207 2lhi_A Calmodulin, serine/thre 87.5 9.3 0.00032 30.3 13.6 69 56-124 10-78 (176)
208 4eto_A Protein S100-A4; calciu 87.5 2.5 8.5E-05 30.7 7.6 67 56-122 9-82 (93)
209 3khe_A Calmodulin-like domain 87.5 2 6.8E-05 33.6 7.5 82 55-137 85-166 (191)
210 2zfd_A Calcineurin B-like prot 87.4 8.8 0.0003 31.3 11.9 81 57-138 48-132 (226)
211 1ij5_A Plasmodial specific LAV 87.4 0.88 3E-05 40.5 5.9 63 57-119 122-184 (323)
212 2be4_A Hypothetical protein LO 87.3 3.5 0.00012 34.0 9.4 87 52-138 6-114 (272)
213 1tr8_A Conserved protein (MTH1 87.1 0.68 2.3E-05 35.3 4.3 34 9-42 66-99 (102)
214 1w7j_B Myosin light chain 1; m 86.9 0.74 2.5E-05 34.7 4.6 64 56-120 86-149 (151)
215 1q80_A SCP, sarcoplasmic calci 86.9 2.6 8.9E-05 32.3 7.8 65 56-122 93-157 (174)
216 2wcb_A Protein S100-A12; calci 86.9 1 3.4E-05 32.7 5.0 67 56-122 11-84 (95)
217 3zwh_A Protein S100-A4; Ca-bin 86.5 3.3 0.00011 30.9 7.9 68 56-123 12-86 (104)
218 1djx_A PLC-D1, phosphoinositid 86.4 1.2 4.1E-05 43.7 6.8 136 56-197 10-150 (624)
219 2ehb_A Calcineurin B-like prot 86.4 9.4 0.00032 30.3 11.2 80 57-137 37-120 (207)
220 3mse_B Calcium-dependent prote 86.2 6.8 0.00023 30.7 10.2 79 57-137 73-151 (180)
221 3dtp_E RLC, myosin regulatory 86.1 1.3 4.6E-05 35.6 6.0 66 55-121 124-189 (196)
222 1jfj_A Ehcabp, calcium-binding 86.0 0.92 3.1E-05 33.0 4.5 70 55-124 34-106 (134)
223 2lbc_A Ubiquitin carboxyl-term 86.0 0.72 2.5E-05 35.9 4.1 41 8-49 78-118 (126)
224 3pm8_A PFCDPK2, calcium-depend 85.8 1.1 3.7E-05 36.3 5.3 20 103-122 139-158 (197)
225 2ccm_A Calexcitin; EF hand, ca 85.6 3.2 0.00011 32.5 7.9 64 57-122 109-172 (191)
226 2hpk_A Photoprotein berovin; s 85.6 3 0.0001 33.4 7.8 62 59-122 130-191 (208)
227 2jul_A Calsenilin; EF-hand, ca 85.5 6.1 0.00021 33.1 10.1 72 54-125 88-161 (256)
228 1juo_A Sorcin; calcium-binding 85.0 2.9 9.8E-05 33.4 7.4 63 55-124 71-134 (198)
229 3a8r_A Putative uncharacterize 85.0 1.3 4.5E-05 35.5 5.4 70 55-125 57-131 (179)
230 2ggz_A Guanylyl cyclase-activa 84.9 5.6 0.00019 32.1 9.2 67 57-123 57-123 (211)
231 1xk4_C Calgranulin B; S100 fam 84.8 3.8 0.00013 30.5 7.6 67 56-122 11-85 (113)
232 2lvv_A Flagellar calcium-bindi 84.5 2.5 8.6E-05 34.9 7.0 64 57-122 133-199 (226)
233 1ij5_A Plasmodial specific LAV 83.9 3.2 0.00011 36.8 7.9 63 58-122 189-252 (323)
234 2aao_A CDPK, calcium-dependent 83.7 1.2 4.2E-05 34.0 4.5 20 104-123 110-129 (166)
235 2cp8_A NEXT to BRCA1 gene 1 pr 83.5 1.4 4.7E-05 29.9 4.0 40 10-49 11-50 (54)
236 1snl_A Nucleobindin 1, calnuc; 83.3 4 0.00014 29.4 7.0 65 57-121 20-100 (103)
237 1eh2_A EPS15; calcium binding, 83.0 3.5 0.00012 30.8 6.6 64 56-122 14-77 (106)
238 2sas_A Sarcoplasmic calcium-bi 83.0 3 0.0001 32.1 6.6 65 56-122 104-168 (185)
239 4ae4_A Ubiquitin-associated pr 82.8 0.75 2.6E-05 35.9 2.8 65 2-67 2-67 (118)
240 1vdl_A Ubiquitin carboxyl-term 82.5 2 6.9E-05 31.0 4.7 41 8-48 24-65 (80)
241 2i7a_A Calpain 13; calcium-dep 82.2 7.4 0.00025 31.1 8.8 50 72-121 19-74 (174)
242 2dna_A Unnamed protein product 82.2 2.9 9.8E-05 29.5 5.4 41 9-49 20-60 (67)
243 2l4h_A Calcium and integrin-bi 82.0 4.2 0.00014 33.4 7.4 66 56-121 128-202 (214)
244 3fia_A Intersectin-1; EH 1 dom 82.0 2.6 9E-05 32.8 5.7 64 55-122 31-95 (121)
245 3nxa_A Protein S100-A16; S100 81.8 5.8 0.0002 29.1 7.4 77 56-132 10-94 (100)
246 1psr_A Psoriasin, S100A7; EF-h 81.5 1.7 5.8E-05 31.8 4.3 65 56-121 9-80 (100)
247 2kyc_A Parvalbumin-3, parvalbu 81.3 0.44 1.5E-05 34.4 0.9 65 56-120 40-107 (108)
248 1wgl_A TOLL-interacting protei 81.1 2.4 8E-05 29.0 4.5 41 8-48 9-50 (59)
249 2zc2_A DNAD-like replication p 80.9 2.5 8.5E-05 29.8 4.8 72 57-131 4-77 (78)
250 3i5g_C Myosin catalytic light 80.7 9.3 0.00032 29.8 8.8 121 2-122 1-152 (159)
251 3dd4_A KV channel-interacting 80.5 5.3 0.00018 33.0 7.6 66 56-121 137-214 (229)
252 2jq6_A EH domain-containing pr 79.2 5.5 0.00019 31.5 6.9 65 55-122 49-113 (139)
253 3i5g_C Myosin catalytic light 79.0 6.2 0.00021 30.9 7.2 81 57-138 9-95 (159)
254 4drw_A Protein S100-A10/annexi 78.9 4 0.00014 31.5 5.8 66 57-123 15-85 (121)
255 3nyv_A Calmodulin-domain prote 78.8 22 0.00074 32.4 11.8 66 57-122 335-411 (484)
256 2lvv_A Flagellar calcium-bindi 78.5 13 0.00046 30.4 9.4 64 56-119 50-123 (226)
257 3a8r_A Putative uncharacterize 77.9 6.1 0.00021 31.5 6.9 77 56-137 27-107 (179)
258 1s6i_A CDPK, calcium-dependent 77.9 6.8 0.00023 31.2 7.2 70 55-124 44-113 (188)
259 3cs1_A Flagellar calcium-bindi 77.4 3.3 0.00011 33.9 5.3 63 57-121 130-195 (219)
260 1pva_A Parvalbumin; calcium bi 77.2 17 0.00056 25.7 9.6 79 54-137 7-90 (110)
261 2lhi_A Calmodulin, serine/thre 76.7 5.5 0.00019 31.7 6.3 65 56-121 83-147 (176)
262 2ehb_A Calcineurin B-like prot 75.5 11 0.00036 30.0 7.7 64 57-120 74-138 (207)
263 2h2k_A Protein S100-A13; calci 75.4 9.7 0.00033 28.3 7.0 64 57-122 22-91 (106)
264 1aip_C EF-TS, elongation facto 75.4 3.1 0.00011 35.3 4.5 40 8-47 3-42 (196)
265 2zfd_A Calcineurin B-like prot 75.3 11 0.00036 30.8 7.9 64 57-120 85-149 (226)
266 3sg6_A Gcamp2, myosin light ch 75.3 6.8 0.00023 37.0 7.4 86 22-124 330-416 (450)
267 3k21_A PFCDPK3, calcium-depend 75.2 12 0.00042 29.6 8.1 64 57-122 87-151 (191)
268 1qxp_A MU-like calpain; M-calp 74.8 4.1 0.00014 41.2 6.1 65 57-122 607-671 (900)
269 2hps_A Coelenterazine-binding 74.3 7.9 0.00027 29.9 6.5 51 72-122 117-167 (186)
270 3u0k_A Rcamp; fluorescent prot 73.8 7.3 0.00025 36.8 7.1 86 22-124 320-406 (440)
271 2crn_A Ubash3A protein; compac 72.8 2.5 8.7E-05 29.2 2.8 39 9-48 10-49 (64)
272 3i5g_B Myosin regulatory light 72.1 17 0.00057 28.1 8.0 72 57-132 16-89 (153)
273 1dgu_A Calcium-saturated CIB; 71.8 3.2 0.00011 32.4 3.6 32 57-88 98-129 (183)
274 2l4h_A Calcium and integrin-bi 71.7 23 0.00079 28.7 9.1 49 72-124 74-123 (214)
275 3q5i_A Protein kinase; CDPK, m 71.6 18 0.00063 33.3 9.4 66 56-121 354-427 (504)
276 1aua_A Phosphatidylinositol tr 71.5 4.4 0.00015 35.2 4.8 42 3-44 25-73 (296)
277 3mwu_A Calmodulin-domain prote 71.4 18 0.0006 33.2 9.2 67 56-122 330-410 (486)
278 1bu3_A Calcium-binding protein 71.2 24 0.00082 24.8 9.4 80 53-137 6-90 (109)
279 5pal_A Parvalbumin; calcium-bi 71.1 24 0.00083 24.8 8.8 80 53-137 5-89 (109)
280 1xb2_B EF-TS, elongation facto 71.0 3.8 0.00013 36.7 4.3 39 8-46 4-42 (291)
281 3fs7_A Parvalbumin, thymic; ca 70.1 25 0.00087 24.7 8.6 80 53-137 6-90 (109)
282 2be4_A Hypothetical protein LO 70.1 9.1 0.00031 31.4 6.3 68 54-121 101-176 (272)
283 2ct9_A Calcium-binding protein 69.9 8 0.00027 30.9 5.7 63 57-123 29-91 (208)
284 3a4u_B Multiple coagulation fa 69.7 5.4 0.00019 30.7 4.5 64 56-119 67-142 (143)
285 2pvb_A Protein (parvalbumin); 68.8 27 0.00093 24.4 8.7 79 54-137 6-89 (108)
286 3q8g_A CRAL-TRIO domain-contai 68.6 4.8 0.00016 35.9 4.5 43 3-45 34-83 (320)
287 1pul_A Hypothetical protein C3 68.4 24 0.00082 27.6 7.9 67 55-122 20-93 (125)
288 1sjj_A Actinin; 3-helix bundle 68.0 7.4 0.00025 38.8 6.2 66 57-122 725-790 (863)
289 1rro_A RAT oncomodulin; calciu 67.3 25 0.00085 24.7 7.5 80 53-137 5-89 (108)
290 1r5l_A Alpha-TTP, protein (alp 67.1 2.6 8.7E-05 35.7 2.2 43 3-45 3-55 (262)
291 1rwy_A Parvalbumin alpha; EF-h 66.7 30 0.001 24.2 8.5 79 54-137 6-89 (109)
292 1wlm_A Protein CGI-38; structu 66.7 18 0.00062 29.2 7.1 70 53-122 11-89 (151)
293 3mwu_A Calmodulin-domain prote 66.6 3.4 0.00012 38.1 3.1 68 56-123 380-447 (486)
294 3cs1_A Flagellar calcium-bindi 64.8 6.4 0.00022 32.1 4.2 66 56-121 47-122 (219)
295 3g2s_A C-terminal fragment of 63.9 28 0.00095 27.7 7.7 96 57-152 10-139 (149)
296 3h4s_E KCBP interacting Ca2+-b 63.9 6.1 0.00021 29.8 3.7 81 58-138 4-87 (135)
297 2jrf_A Tubulin polymerization- 63.3 23 0.00077 29.6 7.2 70 53-122 4-82 (184)
298 3bow_A Calpain-2 catalytic sub 62.8 13 0.00043 36.8 6.6 64 55-124 573-636 (714)
299 2juj_A E3 ubiquitin-protein li 62.8 10 0.00035 25.7 4.1 39 7-46 6-44 (56)
300 2lva_A Ubiquitin carboxyl-term 66.4 1.6 5.5E-05 34.4 0.0 41 8-48 18-59 (129)
301 1eg3_A Dystrophin; EF-hand lik 61.4 20 0.00067 31.4 6.9 65 56-121 167-242 (261)
302 4ae4_A Ubiquitin-associated pr 60.6 9.2 0.00031 29.6 4.1 37 10-47 78-114 (118)
303 2dhy_A CUE domain-containing p 59.7 8.7 0.0003 26.9 3.5 41 7-47 17-58 (67)
304 1jw2_A Hemolysin expression mo 59.3 22 0.00075 25.3 5.5 40 110-152 6-45 (72)
305 3lij_A Calcium/calmodulin depe 58.3 24 0.00082 32.4 7.3 67 55-121 388-454 (494)
306 2ou3_A Tellurite resistance pr 57.2 26 0.0009 27.7 6.5 90 3-96 45-136 (161)
307 2oo9_A E3 ubiquitin-protein li 56.1 15 0.00052 23.9 3.9 36 9-45 5-40 (46)
308 3q5i_A Protein kinase; CDPK, m 55.9 26 0.00089 32.2 7.2 82 54-136 396-477 (504)
309 3nyv_A Calmodulin-domain prote 54.6 34 0.0012 31.1 7.7 82 56-138 381-462 (484)
310 1oqy_A HHR23A, UV excision rep 53.7 11 0.00037 34.7 4.0 39 8-47 168-206 (368)
311 1qxp_A MU-like calpain; M-calp 52.9 5.9 0.0002 40.0 2.3 66 56-122 533-606 (900)
312 1fi6_A EH domain protein REPS1 51.7 15 0.00051 25.8 3.8 68 90-158 5-73 (92)
313 1olm_A SEC14-like protein 2; l 51.2 16 0.00053 33.2 4.7 43 3-45 7-57 (403)
314 2keb_A DNA polymerase subunit 50.6 22 0.00074 26.9 4.5 51 69-122 21-71 (101)
315 3k6g_A Telomeric repeat-bindin 49.1 59 0.002 24.7 6.7 58 8-67 13-85 (111)
316 1ku1_A ARF guanine-nucleotide 49.0 53 0.0018 28.1 7.4 39 7-45 22-63 (230)
317 1qjt_A EH1, epidermal growth f 47.9 13 0.00046 26.8 3.0 67 101-168 19-85 (99)
318 2kld_A Polycystin-2; PC2, PKD2 47.9 4.2 0.00014 30.8 0.2 30 108-138 61-90 (123)
319 2h5n_A Hypothetical protein PG 47.1 76 0.0026 24.3 7.5 90 3-95 34-125 (133)
320 2jqt_A H-NS/STPA-binding prote 47.0 16 0.00053 26.0 3.0 40 111-152 2-41 (71)
321 1avs_A Troponin C; muscle cont 44.1 28 0.00096 23.7 4.2 48 90-137 16-65 (90)
322 3dv9_A Beta-phosphoglucomutase 44.0 12 0.00041 29.9 2.4 69 73-141 165-244 (247)
323 3lij_A Calcium/calmodulin depe 43.6 23 0.00077 32.6 4.6 66 56-121 345-418 (494)
324 1ufz_A Hypothetical protein BA 42.9 14 0.00048 27.0 2.4 37 12-48 38-76 (83)
325 4ex6_A ALNB; modified rossman 42.4 27 0.00092 27.7 4.4 62 74-135 161-233 (237)
326 2ktg_A Calmodulin, putative; e 42.0 23 0.00078 23.6 3.4 48 90-137 10-59 (85)
327 2pmy_A RAS and EF-hand domain- 41.7 23 0.0008 24.5 3.4 35 102-137 36-70 (91)
328 1k9u_A Polcalcin PHL P 7; poll 40.4 22 0.00074 23.4 3.0 37 101-137 11-47 (78)
329 3m9l_A Hydrolase, haloacid deh 40.2 16 0.00054 28.6 2.6 63 74-136 128-197 (205)
330 3ohm_B 1-phosphatidylinositol- 39.6 48 0.0016 33.9 6.5 67 56-122 222-302 (885)
331 2opo_A Polcalcin CHE A 3; calc 38.5 27 0.00094 23.3 3.3 49 89-137 6-55 (86)
332 2zkm_X 1-phosphatidylinositol- 37.7 67 0.0023 32.3 7.2 66 56-121 218-297 (799)
333 1k1f_A Breakpoint cluster regi 36.6 73 0.0025 22.3 5.1 41 114-155 6-62 (72)
334 2kn2_A Calmodulin; S MAPK phos 35.8 47 0.0016 22.4 4.3 57 101-157 17-74 (92)
335 2pjp_A Selenocysteine-specific 35.6 26 0.0009 26.3 3.1 22 11-32 82-103 (121)
336 1c07_A Protein (epidermal grow 34.9 48 0.0016 23.3 4.3 47 89-136 5-52 (95)
337 2kz2_A Calmodulin, CAM; TR2C, 34.7 1.1E+02 0.0036 21.2 6.1 37 101-137 37-74 (94)
338 1p3q_Q VPS9P, vacuolar protein 34.4 55 0.0019 21.8 4.1 40 7-46 11-51 (54)
339 2hps_A Coelenterazine-binding 34.3 18 0.00062 27.8 2.0 65 56-122 13-92 (186)
340 2di0_A Activating signal coint 34.3 61 0.0021 22.9 4.5 41 8-48 13-54 (71)
341 3qr0_A Phospholipase C-beta (P 33.9 42 0.0014 34.0 5.0 66 56-122 228-309 (816)
342 2lh0_A Histone chaperone RTT10 33.8 36 0.0012 24.0 3.2 26 128-153 14-40 (70)
343 1b43_A Protein (FEN-1); nuclea 33.3 1E+02 0.0035 27.3 7.1 68 18-93 242-315 (340)
344 1qlm_A Methenyltetrahydrometha 32.7 2.2 7.7E-05 38.5 -4.0 64 31-96 93-167 (316)
345 2ld7_B Paired amphipathic heli 32.1 1.3E+02 0.0045 21.0 7.0 59 132-195 13-71 (75)
346 1djx_A PLC-D1, phosphoinositid 31.2 96 0.0033 30.1 7.0 65 56-121 79-149 (624)
347 2lv7_A Calcium-binding protein 31.2 23 0.0008 25.6 2.0 51 88-138 30-82 (100)
348 2p6v_A Transcription initiatio 30.5 70 0.0024 24.6 4.6 51 92-147 45-100 (114)
349 1nri_A Hypothetical protein HI 30.4 22 0.00074 31.2 2.0 36 12-47 248-283 (306)
350 2qfz_A TBC1 domain family memb 28.9 1.4E+02 0.0049 26.0 7.3 31 152-182 244-274 (345)
351 1eh2_A EPS15; calcium binding, 28.6 74 0.0025 23.3 4.5 48 88-136 9-56 (106)
352 3rm1_A Protein S100-B; alpha-h 28.6 85 0.0029 21.7 4.7 51 108-158 26-82 (92)
353 3he4_B Synzip5; heterodimeric 28.4 89 0.0031 19.5 4.0 18 123-140 1-18 (46)
354 1j7q_A CAVP, calcium vector pr 27.5 1.3E+02 0.0046 19.7 6.6 42 88-129 8-51 (86)
355 3mc1_A Predicted phosphatase, 27.5 34 0.0012 26.7 2.6 63 74-136 143-216 (226)
356 2d58_A Allograft inflammatory 27.3 54 0.0019 23.1 3.5 35 103-137 42-77 (107)
357 4gvq_A Methenyltetrahydrometha 27.3 3.2 0.00011 37.6 -4.0 65 31-97 93-168 (316)
358 1g1e_B SIN3A; four-helix bundl 26.9 97 0.0033 22.4 4.7 68 126-194 9-86 (89)
359 3qye_A TBC1 domain family memb 26.3 89 0.003 27.2 5.3 67 153-220 224-291 (331)
360 2cos_A Serine/threonine protei 26.1 64 0.0022 21.6 3.3 36 6-42 7-43 (54)
361 3q8k_A Flap endonuclease 1; he 25.8 1.6E+02 0.0056 26.2 7.1 83 9-93 219-320 (341)
362 3qxg_A Inorganic pyrophosphata 25.7 37 0.0013 27.1 2.5 65 73-137 166-241 (243)
363 2jjz_A Ionized calcium-binding 25.3 1E+02 0.0035 23.2 4.9 73 55-138 22-96 (150)
364 2i5u_A DNAD domain protein; st 25.2 37 0.0013 24.0 2.2 56 74-131 19-82 (83)
365 2kgr_A Intersectin-1; structur 25.1 70 0.0024 23.3 3.8 75 92-167 12-87 (111)
366 1e91_A Paired amphipathic heli 24.9 1.9E+02 0.0065 20.6 7.2 67 127-194 7-80 (85)
367 3bz6_A UPF0502 protein pspto_2 24.7 51 0.0017 27.4 3.1 55 81-140 99-154 (183)
368 3zyq_A Hepatocyte growth facto 24.7 2.5E+02 0.0085 23.4 7.7 32 108-139 82-114 (226)
369 2es9_A Putative cytoplasmic pr 23.4 27 0.00092 26.3 1.1 19 73-91 35-53 (115)
370 1iq3_A Ralbp1-interacting prot 23.2 48 0.0017 24.3 2.5 48 87-135 15-63 (110)
371 2boy_A 3-chlorocatechol 1,2-di 22.9 98 0.0033 26.9 4.8 49 186-244 13-61 (254)
372 2kld_A Polycystin-2; PC2, PKD2 22.6 51 0.0017 24.5 2.6 60 58-123 51-110 (123)
373 1fkm_A Protein (GYP1P), ORF YO 22.2 1.8E+02 0.0062 26.2 6.7 30 152-181 231-260 (396)
374 2f05_A Paired amphipathic heli 21.9 2.5E+02 0.0086 20.9 7.0 72 127-199 7-85 (105)
375 3zq7_A KDP operon transcriptio 21.1 1.4E+02 0.0047 21.0 4.7 55 88-143 27-82 (102)
376 1gxq_A PHOB, phosphate regulon 21.1 1.7E+02 0.0059 20.7 5.3 56 87-143 29-85 (106)
377 2keb_A DNA polymerase subunit 21.0 90 0.0031 23.5 3.6 61 40-102 13-73 (101)
378 3iru_A Phoshonoacetaldehyde hy 20.9 29 0.00097 28.1 0.9 68 74-141 169-271 (277)
379 3nso_A Protein S100-A3; EF-han 20.5 1.9E+02 0.0064 20.9 5.4 53 107-159 26-84 (101)
380 2jxu_A TERB, KP-TERB; tellurit 20.3 2.8E+02 0.0097 20.9 6.7 20 74-93 130-149 (153)
381 1wy9_A Allograft inflammatory 20.3 83 0.0029 23.7 3.5 45 93-137 47-93 (147)
382 3v22_V Ribosome modulation fac 20.1 49 0.0017 22.7 1.8 19 103-121 28-46 (61)
383 2czy_A Paired amphipathic heli 20.1 2.3E+02 0.0078 19.7 6.5 67 126-197 3-70 (77)
No 1
>3bq3_A Defective in cullin neddylation protein 1; ubiquitin, ubiquitination,SCF,cullin, E3 E2, cell cycle, protein degradation, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2is9_A* 3o2p_A 3o6b_A 3tdi_B 2l4e_A 2l4f_A
Probab=100.00 E-value=1.6e-84 Score=585.10 Aligned_cols=240 Identities=24% Similarity=0.525 Sum_probs=226.7
Q ss_pred CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccCCC----------CCcCCHHHHHHHHHHhcCCCCC
Q 025620 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS----------KSLTDTRHLEELYNRYKDPYLD 72 (250)
Q Consensus 3 ~l~~~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~~~----------~~~~~~~~l~~lF~~Y~~~~~d 72 (250)
+|++.|+++|+||+++||+++++|++||++|+|||+.|+++||++|+. .++.+.++|+++|++|+ ++|
T Consensus 10 ~l~~~~~~~i~qF~~iTg~~~~~A~~~L~~~~WdLe~Al~~ff~~~~~~~~~~~~~~~~~~~~~~~l~~lF~~Y~--~~d 87 (270)
T 3bq3_A 10 KDASPEQEAIESFTSLTKCDPKVSRKYLQRNHWNINYALNDYYDKEIGTFTDEVSTVAHPPVYPKELTQVFEHYI--NNN 87 (270)
T ss_dssp ---CHHHHHHHHHHHHHCCCHHHHHHHHHTTTTCHHHHHHHHHHHHCC--------CCCCCSSCHHHHHHHHHHC--BTT
T ss_pred hhccchHHHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHhCccccccccccccccccccHHHHHHHHHHhc--CCC
Confidence 688889999999999999999999999999999999999999988764 13567899999999999 568
Q ss_pred ccchHHHHHHHhhcCCCCCchHHHHHHHhhccccc-ccccHHHHHHHHHHcCCCCHHHHHHHHHHHHH-HccchHHHHHH
Q 025620 73 MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATM-CEFSKQEFIGGLQSLGIDSLDKFRERISFMRA-ELKDEQKFREI 150 (250)
Q Consensus 73 ~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~-g~~tr~ef~~g~~~l~~~si~~lk~~l~~L~~-~l~~~~~Fk~~ 150 (250)
.||+||+++||+||||+|||+++|||||+|+|++| |+|||+||++||+++||+|+++||++|+.|++ .+.++..|++|
T Consensus 88 ~I~~dG~~~~~~DLgv~ped~~~Lvla~~l~a~~~~g~ftr~ef~~G~~~l~~dsi~~lk~~l~~l~~~~~~d~~~Fk~~ 167 (270)
T 3bq3_A 88 LFDIDSLVKFIEELGYNLEDLATLCLAHLLGYKKLEEPLKREDFLSTWFMQGCSTISDMQECIKTLDVKLHEDLQYFTQI 167 (270)
T ss_dssp BCCHHHHHHHHHHHTCCTTCHHHHHHHHHTTCSCTTSCCCHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred ccCHhhHHHHHHHcCCChhhHHHHHHHHHcCCCccCceeeHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHccCHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999999999999999999999999 55788889999
Q ss_pred HHHHHHhhhhcCCccccHHHHHHHHHhhcCCCCc------hhHHHHHHHHHhhcCCCCCHhhHHHHHHHHhhh---CCCC
Q 025620 151 YNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQW------PLVDHWCQFLQAKHNKAISRDTWSQLLEFARTV---DPAL 221 (250)
Q Consensus 151 Y~f~F~~~~~~~qk~l~~d~Ai~~W~lll~~~~~------~~l~~w~~Fl~~~~~k~IskD~W~~~l~F~~~~---~~~l 221 (250)
|+|||+|||++|||+|++|+||+||+|||+++ | |++++|++||+++++|+||||||+|+|+|++++ ++++
T Consensus 168 Y~f~F~~~r~~gqk~l~~d~Ai~~W~lll~~~-~p~~~~~~~l~~W~~FL~~~~~k~IskDtW~~~l~F~~~~~~~~~dl 246 (270)
T 3bq3_A 168 YNYAFNLILDPNRKDIDTDEGIQYWKLFFQPE-YPVRMEPDLLEAWFRFLRDEGKTTISKDTWRMLLLFFKRYPTIQKII 246 (270)
T ss_dssp HHHHHHHHCCTTCSEEEHHHHHHHHHHHTSTT-SSCCCCHHHHHHHHHHHHHHTCCEEEHHHHHHHHHHHHHCCSHHHHH
T ss_pred HHHHHHHhcCcCcCcCcHHHHHHHHHHHcCCc-ccccccchHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHhccCCCcc
Confidence 99999999999999999999999999999998 8 899999999999999999999999999999988 7899
Q ss_pred CCCCcCCCchhhHHHHHHHHHhhc
Q 025620 222 SNYDAEGAWPYLIDEFVEYLTENG 245 (250)
Q Consensus 222 s~YDe~~AWP~liDeFVe~~r~~~ 245 (250)
++|||+||||+||||||||+|++|
T Consensus 247 s~YDe~~AWP~liDeFVe~~~~~~ 270 (270)
T 3bq3_A 247 SDYDETAAWPFIIDEFYECLQDQQ 270 (270)
T ss_dssp HHCCTTSSCCHHHHHHHHHHHHTC
T ss_pred ccCCccCccHHHHHHHHHHHhccC
Confidence 999999999999999999999875
No 2
>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}
Probab=100.00 E-value=8.7e-76 Score=507.26 Aligned_cols=196 Identities=41% Similarity=0.851 Sum_probs=180.3
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCCCHHHHHH
Q 025620 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRE 132 (250)
Q Consensus 53 ~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~ 132 (250)
+.+.++|+++|++|++|+++.||+||+++||+||||+|||+++|||||+|||++||+|||+||++||+++||+|+++||+
T Consensus 3 ~~~~~~l~~lF~~Y~d~~~~~I~~dG~~~~~~DLgv~ped~~~LvLaw~l~a~~~g~ftr~ef~~G~~~l~~dsi~~lk~ 82 (199)
T 3kev_A 3 RADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEKEFVEGLANLQVDSLEKLKR 82 (199)
T ss_dssp -CCHHHHHHHHHHHCCTTSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHTTCCSHHHHHH
T ss_pred ccCHHHHHHHHHHhcCCCcCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCcccHHHHHHHHHHhCCCCHHHHHH
Confidence 56789999999999998767999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccchHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHhhcCCCCchhHHHHHHHHHhhcCCCCCHhhHHHHHH
Q 025620 133 RISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLE 212 (250)
Q Consensus 133 ~l~~L~~~l~~~~~Fk~~Y~f~F~~~~~~~qk~l~~d~Ai~~W~lll~~~~~~~l~~w~~Fl~~~~~k~IskD~W~~~l~ 212 (250)
+|+.|+++|+++..||+||+|||+|+|++|||+|++|+||+||++||+++ +|++++|++||++++ |+||||||+|+|+
T Consensus 83 ~l~~l~~~l~d~~~Fk~~Y~ftF~~~re~gqk~L~~e~Ai~~W~lll~~~-~~~l~~W~~FL~~~~-k~IskD~W~~~l~ 160 (199)
T 3kev_A 83 KLSSLRKEIEDPSKFRAFYQFVFQYSKEPSQRSLPAETAMALWDVLLRGR-FSLLDSWLEFLKNNT-HSISRDTWNLLYD 160 (199)
T ss_dssp HHHHHHHHTTSHHHHHHHHHHHHHHHSCTTCSSBCHHHHHHHHHHHHTTT-CTTHHHHHHHGGGCC-SCBCHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHcCcCcCCCCHHHHHHHHHHHhCCc-cHHHHHHHHHHHhcC-CCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 999999999999888 9999999999999
Q ss_pred HHhhhCCCCCCCCcCCCchhhHHHHHHHHHhhcCCcCC
Q 025620 213 FARTVDPALSNYDAEGAWPYLIDEFVEYLTENGIVQNR 250 (250)
Q Consensus 213 F~~~~~~~ls~YDe~~AWP~liDeFVe~~r~~~~~~~~ 250 (250)
|++++++++++|||+||||+||||||||+|+++.++|+
T Consensus 161 F~~~i~~dls~YDe~gAWP~liDeFVe~~r~~~~~~~~ 198 (199)
T 3kev_A 161 FSQLSEKDLSDYDENGAWPVLIDDFVKWLKHEQPNKHE 198 (199)
T ss_dssp HHTC--CTTTTCC---CCCHHHHHHHHHHTTC------
T ss_pred HHHHhcccccCCCCCCCchHHHHHHHHHHHHcCCCcCC
Confidence 99999999999999999999999999999999999885
No 3
>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*
Probab=100.00 E-value=9.8e-75 Score=501.04 Aligned_cols=194 Identities=44% Similarity=0.901 Sum_probs=186.4
Q ss_pred CHHHHHHHHHHhcCCC-CCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCCCHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRER 133 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~-~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~ 133 (250)
+.++|+++|++|++|+ +|.||+||+++||+||||+|||+++|||||+|+|++||+|||+||++||+++||+|+++||++
T Consensus 2 ~~~~l~~lF~~Y~d~~~~d~I~~dG~~~~~~DLgv~ped~~~Lvlaw~l~a~~~g~ftr~ef~~G~~~l~~dsi~~lk~~ 81 (200)
T 3tdu_A 2 SRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQ 81 (200)
T ss_dssp CHHHHHHHHHHHEETTEEEEECHHHHHHHHHHHTCCTTSHHHHHHHHHTTCSSTTCEEHHHHHHHHHHHTCSSHHHHHHT
T ss_pred CHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCccCHHHHHHHHHHHccccHHHHHHH
Confidence 6789999999999985 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccchHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHhhcCCCCchhHHHHHHHHHhhcCCCCCHhhHHHHHHH
Q 025620 134 ISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEF 213 (250)
Q Consensus 134 l~~L~~~l~~~~~Fk~~Y~f~F~~~~~~~qk~l~~d~Ai~~W~lll~~~~~~~l~~w~~Fl~~~~~k~IskD~W~~~l~F 213 (250)
|+.|+++|+++..||+||+|||+|+|++|||+|++|+||+||++||+++ ++++++|++||+++++|+||||||+|+|+|
T Consensus 82 l~~l~~~l~d~~~Fk~~Y~ftF~~~r~~gqk~L~~e~Ai~~W~lll~~~-~~~l~~W~~FL~~~~~k~IskD~W~~~l~F 160 (200)
T 3tdu_A 82 IPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGR-FKFLDLWNKFLLEHHKRSIPKDTWNLLLDF 160 (200)
T ss_dssp HHHHHHHTTSHHHHHHHHHHHHHHHSCTTCSSEEHHHHHHHHHHHSTTS-CTTHHHHHHHHHHTTCCEECHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHHHcCcCcCcCCHHHHHHHHHHHcCCC-chHHHHHHHHHHhcCCcCcCHhHHHHHHHH
Confidence 9999999999989999999999999999999999999999999999988 999999999999999999999999999999
Q ss_pred HhhhCCCCCCCCcCCCchhhHHHHHHHHHhhcCCcC
Q 025620 214 ARTVDPALSNYDAEGAWPYLIDEFVEYLTENGIVQN 249 (250)
Q Consensus 214 ~~~~~~~ls~YDe~~AWP~liDeFVe~~r~~~~~~~ 249 (250)
++++++++|+|||+||||+||||||||+|++....+
T Consensus 161 ~~~i~~dls~YDe~gAWP~liDeFVew~r~~~~~~~ 196 (200)
T 3tdu_A 161 STMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTK 196 (200)
T ss_dssp HHHCCTTCTTCCTTSSCCHHHHHHHHHHHHHCC---
T ss_pred HHHhcccccCCCCCCCchHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999876543
No 4
>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}
Probab=100.00 E-value=4e-74 Score=503.20 Aligned_cols=198 Identities=40% Similarity=0.810 Sum_probs=186.3
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCCCHHHHHH
Q 025620 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRE 132 (250)
Q Consensus 53 ~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~ 132 (250)
+.+.++|+++|++|+++++|.||+||+++||+||||+|||+++|||||+|+|++||+|||+||++||+++||+|+++||+
T Consensus 2 ~~~~~~l~~lF~~Y~d~~~d~I~~eGi~~l~~DLgv~ped~~~LvLAw~l~A~~mg~ftr~eF~~G~~~l~~dsi~~lk~ 81 (221)
T 4gba_A 2 SSSLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICA 81 (221)
T ss_dssp ----CHHHHHHHTTSCSSSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHTCSSHHHHHH
T ss_pred CCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHhCCCccCcCcHHHHHHHHHHhCcCCHHHHHH
Confidence 45678999999999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccchHHHHHHHHHHHHhhhh--cCCccccHHHHHHHHHhhcCCCCchhHHHHHHHHHhh--cCCCCCHhhHH
Q 025620 133 RISFMRAELKDEQKFREIYNFAFAWAKE--KGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAK--HNKAISRDTWS 208 (250)
Q Consensus 133 ~l~~L~~~l~~~~~Fk~~Y~f~F~~~~~--~~qk~l~~d~Ai~~W~lll~~~~~~~l~~w~~Fl~~~--~~k~IskD~W~ 208 (250)
+|+.|+++|+++..||+||+|||+|+|+ +|||+|++|+||+||+|||+++.+|++++|++||+++ ++|+||||||+
T Consensus 82 ~l~~L~~~l~d~~~Fk~~Y~ftF~~~~~~e~gqk~L~le~Ai~~W~Lll~~~~~~~l~~W~~FL~~~~~~~k~IskDtW~ 161 (221)
T 4gba_A 82 RFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWN 161 (221)
T ss_dssp HHHHHHHHTTSHHHHHHHHHHHHHHHSCTTTTCSSEEHHHHHHHHHHHTTTCCCTTHHHHHHHHHHCTTCCCEECHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHhcCCccccCCCHHHHHHHHHHHcCCCCcHHHHHHHHHHHhcCCCCCCcCHHHHH
Confidence 9999999998888899999999999999 9999999999999999999985599999999999987 37999999999
Q ss_pred HHHHHHhhhCCCCCCCCcCCCchhhHHHHHHHHHhhcCCcCC
Q 025620 209 QLLEFARTVDPALSNYDAEGAWPYLIDEFVEYLTENGIVQNR 250 (250)
Q Consensus 209 ~~l~F~~~~~~~ls~YDe~~AWP~liDeFVe~~r~~~~~~~~ 250 (250)
|+|+|++++++++++|||+||||+||||||||+|++++..++
T Consensus 162 ~~l~F~~~i~~dls~YDe~gAWP~liDeFVEw~ke~~~~~~~ 203 (221)
T 4gba_A 162 MFLNFTQVIGPDLSNYSEDEAWPSLFDTFVEWEMERRKREGE 203 (221)
T ss_dssp HHHHHHHHSCSSCTTCCTTSCCCHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhhhhhh
Confidence 999999999999999999999999999999999999876653
No 5
>2dam_A ETEA protein; KIAA0887, UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.40 E-value=2.1e-13 Score=98.29 Aligned_cols=52 Identities=23% Similarity=0.436 Sum_probs=47.5
Q ss_pred CCCCCcchHHHHHHHHhhhC-CCHHHHHHHHHhCCCCchhhhhhhhccCCCCC
Q 025620 1 MHKLSRSNRDKLQQFVSITG-ASEKAALQALKASDWHLEGAFDVFYSQPQSKS 52 (250)
Q Consensus 1 m~~l~~~q~~~i~~F~~iT~-~s~~~A~~~L~~~~w~le~A~~~f~~~~~~~~ 52 (250)
|++|+++++++|++|++||| +++.+|++||+.++|||+.||+.||+++...+
T Consensus 11 ~~~Ls~~~~e~i~qF~~ITg~~d~~~A~~~Le~~~WnLe~Av~~ff~~~~~~p 63 (67)
T 2dam_A 11 ERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEGSG 63 (67)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHTSCHHHHHHHHHHSSCSSC
T ss_pred hhhcChhHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCHHHHHHHHHhCCCCCC
Confidence 56899999999999999999 88999999999999999999999998865433
No 6
>2dal_A Protein KIAA0794; FAS associted factor 1, UBA-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=6.5e-13 Score=94.28 Aligned_cols=48 Identities=35% Similarity=0.405 Sum_probs=45.2
Q ss_pred CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccCCC
Q 025620 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS 50 (250)
Q Consensus 3 ~l~~~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~~~ 50 (250)
.|+..++++|.+|++|||+++.+|++||+.++|||+.||+.||+++..
T Consensus 10 ~~s~~~~e~i~qF~~iTg~~~~~A~~~Le~~~WnLe~Av~~ff~~~~~ 57 (62)
T 2dal_A 10 AASSALKGLIQQFTTITGASESVGKHMLEACNNNLEMAVTMFLDGGGS 57 (62)
T ss_dssp SSCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTSCHHHHHHHHHHSCCC
T ss_pred hcCccHHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHcCCCC
Confidence 578889999999999999999999999999999999999999998754
No 7
>1v92_A NSFL1 cofactor P47; 3-helix bundle, recombination; NMR {Rattus norvegicus} SCOP: a.5.2.3
Probab=99.34 E-value=8.8e-13 Score=87.65 Aligned_cols=43 Identities=35% Similarity=0.618 Sum_probs=40.7
Q ss_pred cchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 6 ~~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
++++++|.+|++|||+++.+|++||+.++|||+.||+.||++|
T Consensus 3 ~~~~~~i~~F~~iTg~~~~~A~~~L~~~~wdle~Ai~~ff~~~ 45 (46)
T 1v92_A 3 EERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDG 45 (46)
T ss_dssp THHHHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred ccHHHHHHHHHHHhCcCHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 4688999999999999999999999999999999999999875
No 8
>3e21_A HFAF1, FAS-associated factor 1; UBA, alternative splicing, apoptosis, nucleus, phosphoprotein; 1.73A {Homo sapiens}
Probab=99.27 E-value=2.4e-12 Score=85.74 Aligned_cols=42 Identities=24% Similarity=0.383 Sum_probs=37.2
Q ss_pred CcchHHHHHHHHhhhCCCH-HHHHHHHHhCCCCchhhhhhhhc
Q 025620 5 SRSNRDKLQQFVSITGASE-KAALQALKASDWHLEGAFDVFYS 46 (250)
Q Consensus 5 ~~~q~~~i~~F~~iT~~s~-~~A~~~L~~~~w~le~A~~~f~~ 46 (250)
+.+++++|++|++|||+++ .+|++||++|||||+.|++.||-
T Consensus 2 ~~d~de~ia~F~~iTG~~d~~~A~~~Lea~nWDLe~Av~~f~~ 44 (45)
T 3e21_A 2 SMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIP 44 (45)
T ss_dssp -CCHHHHHHHHHHHHCCCCHHHHHHHHHHTTTCHHHHHTTC--
T ss_pred cccHHHHHHHHHHHHCCCCHHHHHHHHHHcCCcHHHHHHHHcC
Confidence 3578999999999999995 99999999999999999999984
No 9
>2dzl_A Protein FAM100B; UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=1.4e-11 Score=88.43 Aligned_cols=43 Identities=28% Similarity=0.531 Sum_probs=39.9
Q ss_pred hH-HHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccCCC
Q 025620 8 NR-DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS 50 (250)
Q Consensus 8 q~-~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~~~ 50 (250)
++ ++|++|++|||+++.+|++||+.++|||+.||+.||+++..
T Consensus 16 ~~q~~i~qF~~iTg~~~~~A~~~Le~~~WdLe~Al~~ff~~~~~ 59 (66)
T 2dzl_A 16 RHQVMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQETNI 59 (66)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHTTTTCHHHHHHHHHTCSCC
T ss_pred ccHHHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHcCCCC
Confidence 44 78999999999999999999999999999999999998754
No 10
>2jp7_A MRNA export factor MEX67; solution MEX67, UBA, translation; NMR {Saccharomyces cerevisiae} PDB: 2khh_A
Probab=97.99 E-value=7.2e-06 Score=56.94 Aligned_cols=45 Identities=20% Similarity=0.260 Sum_probs=42.9
Q ss_pred CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 025620 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (250)
Q Consensus 3 ~l~~~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~ 47 (250)
+|++.|.++|.+|+..||.+.+=+..+|+.++||++.|+..|-+.
T Consensus 1 ~l~~~q~~mv~~~s~~T~Mn~e~S~~cL~~n~Wd~~~A~~~F~~~ 45 (57)
T 2jp7_A 1 RLNPVQLELLNKLHLETKLNAEYTFMLAEQSNWNYEVAIKGFQSS 45 (57)
T ss_dssp CCCHHHHHHHHHHHHHHCSCHHHHHHHHHHTTTCSHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 488999999999999999999999999999999999999999875
No 11
>1oai_A Nuclear RNA export factor; nuclear transport, nuclear transport factor; 1.0A {Homo sapiens} SCOP: a.5.2.3
Probab=97.92 E-value=1e-05 Score=56.46 Aligned_cols=45 Identities=20% Similarity=0.377 Sum_probs=42.2
Q ss_pred CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 025620 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (250)
Q Consensus 3 ~l~~~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~ 47 (250)
-||+.|.++|.+|+..||.+.+=+..+|+.++||++.|+..|-+.
T Consensus 2 ~ls~~q~~mv~~~s~~Tgmn~~~s~~cL~~~~Wd~~~A~~~F~~l 46 (59)
T 1oai_A 2 TLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHL 46 (59)
T ss_dssp CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 378889999999999999999999999999999999999999763
No 12
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=97.71 E-value=1.4e-05 Score=73.41 Aligned_cols=42 Identities=40% Similarity=0.677 Sum_probs=38.5
Q ss_pred chHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 7 ~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
...+++++|.+||||++..|+.||+.++|+|+.|++.||+.+
T Consensus 44 ~~~~~~~~f~~~~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~ 85 (362)
T 4gew_A 44 SDEQKLHEFAIITATDEAFAQSILQDVDWDLKKALDVFYGSE 85 (362)
T ss_dssp CHHHHHHHHHHHHTCCHHHHHHHTTSSSSCHHHHHHHHHHCG
T ss_pred chHHHHHHHHHHhCCcHHHHHHHHhhcCchHHHHHHHHcCCc
Confidence 356789999999999999999999999999999999999553
No 13
>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1
Probab=97.58 E-value=8e-05 Score=47.15 Aligned_cols=39 Identities=31% Similarity=0.319 Sum_probs=34.8
Q ss_pred cchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhh
Q 025620 6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45 (250)
Q Consensus 6 ~~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~ 45 (250)
++.++.|++++++ |.++..|++.|..++||++.|++..|
T Consensus 2 ~~~~~~i~~L~~m-Gf~~~~a~~AL~~~~~n~e~A~~~L~ 40 (40)
T 1z96_A 2 PGLNSKIAQLVSM-GFDPLEAAQALDAANGDLDVAASFLL 40 (40)
T ss_dssp -CHHHHHHHHHHT-TCCHHHHHHHHHHTTTCHHHHHHHHC
T ss_pred chHHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHC
Confidence 4567899999999 99999999999999999999998654
No 14
>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1
Probab=97.34 E-value=0.00016 Score=55.92 Aligned_cols=42 Identities=21% Similarity=0.381 Sum_probs=39.1
Q ss_pred chHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 7 ~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
+.++.|+..+++||+++..|+..|..++||++.||+..++..
T Consensus 38 d~eekVk~L~EmtG~seeeAr~AL~~~ngDl~~AI~~Lleg~ 79 (104)
T 1wj7_A 38 DFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGN 79 (104)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred cHHHHHHHHHHhhCCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 446789999999999999999999999999999999999775
No 15
>2l2d_A OTU domain-containing protein 7A; UBA fold, structural genomics, PSI-biology, protein structur initiative, northeast structural genomics consortium; NMR {Homo sapiens}
Probab=96.88 E-value=0.0015 Score=46.09 Aligned_cols=43 Identities=26% Similarity=0.404 Sum_probs=39.1
Q ss_pred CCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhc
Q 025620 4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS 46 (250)
Q Consensus 4 l~~~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~ 46 (250)
++-+.+..+.+|+.-|||.+-.|+..|+-.|||+.+|++.|=+
T Consensus 13 mt~dmdavls~fvrstgaepgLaRDlleGKnWDl~AAL~D~eq 55 (73)
T 2l2d_A 13 MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAALSDYEQ 55 (73)
T ss_dssp SSCCHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhcCCCcchhHHhhccCCccHhHHhhhHHH
Confidence 4556788899999999999999999999999999999999863
No 16
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=96.75 E-value=0.0072 Score=47.85 Aligned_cols=69 Identities=12% Similarity=0.089 Sum_probs=53.9
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcC-CCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 53 ~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLg-v~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
.+....+.++|..+-.++...|+.+-+.+.+..+| ..+....+-.+...+....-|.|+.+||+..+..
T Consensus 3 ~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~ 72 (172)
T 2znd_A 3 LPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 72 (172)
T ss_dssp ---CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHH
T ss_pred CcchhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 34568899999999655566899999999999999 5565555555666677777899999999998875
No 17
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=96.58 E-value=0.017 Score=48.54 Aligned_cols=160 Identities=9% Similarity=-0.007 Sum_probs=100.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCCCHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERIS 135 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l~ 135 (250)
...+.++|..+-.++.+.|+.+-+.+.+..+|..+.+..+-.+...+....-|.|+.+||+..+..+ ..++....
T Consensus 50 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~-----~~l~~~F~ 124 (220)
T 3sjs_A 50 YTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM-----ELAYNLFV 124 (220)
T ss_dssp HHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-----HHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-----HHHHHHHH
Confidence 4678888998866556799999999999999999988777777778888888999999999988873 23332222
Q ss_pred HHHHHccchHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHhhcCCCCchhHHHHHHHHHhhcCCCCCHhhHHHHHHHHh
Q 025620 136 FMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFAR 215 (250)
Q Consensus 136 ~L~~~l~~~~~Fk~~Y~f~F~~~~~~~qk~l~~d~Ai~~W~lll~~~~~~~l~~w~~Fl~~~~~k~IskD~W~~~l~F~~ 215 (250)
.++ ..+.-.|+.+.-..+.+-+-..-.-..++..+.-+. .+...||.+.+..++..+.
T Consensus 125 ~~D---------------------~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l~ 182 (220)
T 3sjs_A 125 MNA---------------------RARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAFAA 182 (220)
T ss_dssp HHC---------------------CSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHHHH
T ss_pred HHC---------------------CCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHHH
Confidence 221 122233444443333332211111123444555544 4446688888887777776
Q ss_pred hhCCCCCCC-CcCCCc------hhhHHHHHHHHH
Q 025620 216 TVDPALSNY-DAEGAW------PYLIDEFVEYLT 242 (250)
Q Consensus 216 ~~~~~ls~Y-De~~AW------P~liDeFVe~~r 242 (250)
....-+..| |.++.= ++=.+||+.++.
T Consensus 183 ~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~ 216 (220)
T 3sjs_A 183 QTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVT 216 (220)
T ss_dssp HHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCCcccccceeHHHHHHHHH
Confidence 555556666 544433 445677776654
No 18
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=96.57 E-value=0.036 Score=44.91 Aligned_cols=67 Identities=13% Similarity=-0.006 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
....|.++|..+-.+....|+.+-+...+..+|..+....+-.+...+....-|.|+.+||+..+..
T Consensus 25 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~ 91 (191)
T 1y1x_A 25 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF 91 (191)
T ss_dssp TTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 4588999999996555668999999999988888887766666777778888899999999998875
No 19
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=96.45 E-value=0.085 Score=39.65 Aligned_cols=66 Identities=9% Similarity=0.153 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...+.++|..|-.+....|+.+-+.+++..+|+.+....+-.+...+....-|.|+.++|+..+..
T Consensus 10 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~ 75 (147)
T 4ds7_A 10 IAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSR 75 (147)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 477888999887655679999999999999999998888777888888888899999999998865
No 20
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=96.44 E-value=0.044 Score=41.46 Aligned_cols=68 Identities=9% Similarity=0.108 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
...+.++|..+-.+..+.|+.+-+.+++..+|+.+....+-.+...+....-|.|+.+||+..+....
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~ 77 (153)
T 3ox6_A 10 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKL 77 (153)
T ss_dssp HHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHh
Confidence 36788888888544556899999999999999999888877777778878889999999999886543
No 21
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=96.36 E-value=0.14 Score=39.66 Aligned_cols=66 Identities=9% Similarity=0.154 Sum_probs=56.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...+.++|..|-.++...|+.+-+..++..+|+.+....+-.+...+....-|.|+.+||+..+..
T Consensus 27 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 92 (169)
T 3qrx_A 27 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTA 92 (169)
T ss_dssp HHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 467888899886555679999999999999999998888877778888888899999999998875
No 22
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=96.31 E-value=0.13 Score=38.68 Aligned_cols=66 Identities=12% Similarity=0.138 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhh---cccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHM---KAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l---~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|..|-.++...|+.+-+..++..+|+.|....+-.+...+ .... |.|+.++|+..+...
T Consensus 7 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~ 75 (149)
T 2mys_C 7 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAA 75 (149)
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHH
Confidence 36788899988665567899999999999999999877777777777 7777 999999999998875
No 23
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=96.24 E-value=0.077 Score=40.66 Aligned_cols=66 Identities=6% Similarity=0.019 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...+.++|..|-.+....|+.+-+..++..+|+.+....+-.+...+....-|.|+.++|+..+..
T Consensus 22 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~ 87 (161)
T 3fwb_A 22 KQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGE 87 (161)
T ss_dssp HHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHH
Confidence 367888888886555679999999999999999998888777888888888899999999998875
No 24
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=96.12 E-value=0.009 Score=40.19 Aligned_cols=68 Identities=12% Similarity=0.048 Sum_probs=55.7
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 54 ~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
.....+.++|..|-.++...|+.+-+.+++..+|..+.+..+-.+...+....-|.|+.+||+..|..
T Consensus 3 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70 (71)
T ss_dssp TTHHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred ccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 35678999999885545568999999999999999887776666666777777899999999988754
No 25
>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A
Probab=96.11 E-value=0.00092 Score=58.89 Aligned_cols=47 Identities=19% Similarity=0.355 Sum_probs=0.0
Q ss_pred CCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccCCC
Q 025620 4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS 50 (250)
Q Consensus 4 l~~~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~~~ 50 (250)
++..|+++|.+|+..||.+.+=+..+|+.++||++.|+..|-+....
T Consensus 194 ~~~~q~~~v~~~~~~T~mn~~~s~~cL~~~~Wd~~~A~~~F~~l~~~ 240 (250)
T 1jkg_B 194 LSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLKAK 240 (250)
T ss_dssp -----------------------------------------------
T ss_pred CCHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 55677789999999999999999999999999999999999877543
No 26
>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=96.06 E-value=0.0068 Score=40.29 Aligned_cols=40 Identities=20% Similarity=0.254 Sum_probs=36.1
Q ss_pred chHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 025620 7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (250)
Q Consensus 7 ~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~ 47 (250)
...+.|++.+++ |-++..|+..|++++||++.|++-.++.
T Consensus 7 ~~~~~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~e~L~~g 46 (49)
T 1ify_A 7 EYETMLTEIMSM-GYERERVVAALRASYNNPHRAVEYLLTG 46 (49)
T ss_dssp HHHHHHHHHHHT-TCCHHHHHHHHHTTTSCSHHHHHHHHHC
T ss_pred cCHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence 456789999999 8999999999999999999999988764
No 27
>1dv0_A DNA repair protein HHR23A; helical bundle, DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 1f4i_A
Probab=96.04 E-value=0.0022 Score=42.49 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=38.2
Q ss_pred CcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 5 SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 5 ~~~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
+++.+++|++.+++ |.++..|++.|.+++||.+.|++-.|+++
T Consensus 1 ~~~e~eaI~rL~~m-GF~~~~a~~Al~a~~~n~e~A~~~Lf~~~ 43 (47)
T 1dv0_A 1 GSQEKEAIERLKAL-GFPESLVIQAYFACEKNENLAANFLLSQN 43 (47)
T ss_dssp --CCHHHHTTTTTT-TCCHHHHHHHHTTTTSCHHHHHHHTTSCC
T ss_pred CcchHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCc
Confidence 45678899999998 99999999999999999999999999865
No 28
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=95.93 E-value=0.023 Score=37.54 Aligned_cols=64 Identities=6% Similarity=0.078 Sum_probs=53.3
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 58 ~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
.+.++|..|-.++...|+.+-+.+.+..+|..+....+-.+...+....-|.|+.+||+..+.+
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 4778999886555568999999999999999887776666667777778899999999998865
No 29
>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=95.91 E-value=0.0077 Score=38.67 Aligned_cols=39 Identities=23% Similarity=0.467 Sum_probs=34.8
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 025620 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~ 47 (250)
..+.|++.+++ |-++..|++.|..++||++.|++--+++
T Consensus 4 ~e~~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~L~~~ 42 (43)
T 2g3q_A 4 KSLAVEELSGM-GFTEEEAHNALEKCNWDLEAATNFLLDS 42 (43)
T ss_dssp HHHHHHHHHTT-TSCHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHhCcCHHHHHHHHHcC
Confidence 45789999997 9999999999999999999999877654
No 30
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=95.89 E-value=0.17 Score=38.69 Aligned_cols=67 Identities=7% Similarity=0.037 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|..|-.+....|+.+-+..++..+|+.+....+-.+...+....-|.|+.++|+..+...
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 85 (162)
T 1top_A 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85 (162)
T ss_dssp HHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHH
Confidence 3678888888865555689999999999999999987777777777777788999999999988763
No 31
>1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=95.81 E-value=0.0096 Score=43.06 Aligned_cols=43 Identities=26% Similarity=0.368 Sum_probs=38.6
Q ss_pred CcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 5 SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 5 ~~~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
++..++.|++.+++ |-++..|+..|++++||++.|++-.+++.
T Consensus 26 ~~~~ee~I~~L~eM-GF~r~~a~~AL~~~~~nve~Ave~Ll~~~ 68 (73)
T 1vg5_A 26 VAASEEQIQKLVAM-GFDRTQVEVALAAADDDLTVAVEILMSQS 68 (73)
T ss_dssp SCCCHHHHHHHHTT-TCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred CcccHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence 44567899999997 89999999999999999999999998764
No 32
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=95.77 E-value=0.12 Score=39.64 Aligned_cols=67 Identities=7% Similarity=-0.004 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhcCCC-CCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~-~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|..|-.++ ...|+.+-+..++..+|+.+....+-.+...+....-|.|+.+||+..+...
T Consensus 17 ~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~ 84 (161)
T 1dtl_A 17 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRS 84 (161)
T ss_dssp HHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence 467888999887666 6689999999999999999987777777777888888999999999998775
No 33
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=95.71 E-value=0.039 Score=38.47 Aligned_cols=67 Identities=7% Similarity=0.182 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|..|-.++...|+.+-+.+.+..+|+.+..-.+-.+...+....-|.|+.+||+..+...
T Consensus 13 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~ 79 (85)
T 2ktg_A 13 QQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIMLEY 79 (85)
T ss_dssp HHHHHHHHHHTCTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4678889999865555689999999999999999887777777777777788999999999998775
No 34
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=95.71 E-value=0.1 Score=39.25 Aligned_cols=66 Identities=11% Similarity=0.158 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...+.++|..|-.++...|+.+-+..++..+|+.+....+-.+...+....-|.|+.+||+..+..
T Consensus 5 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~ 70 (142)
T 2bl0_C 5 VSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGR 70 (142)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHH
Confidence 467889999996555668999999999999999998877777777777888899999999999886
No 35
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=95.69 E-value=0.066 Score=42.24 Aligned_cols=64 Identities=11% Similarity=-0.017 Sum_probs=51.7
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhc-C-------CCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDL-Q-------VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL-g-------v~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
..+.++|..+- ++...|+.+-+.+.+..+ | ..+....+-.+...+....-|.|+.+||+..+..
T Consensus 4 ~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~ 75 (173)
T 1alv_A 4 RQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN 75 (173)
T ss_dssp HHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred hHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHH
Confidence 57889999996 555689999999999998 7 5555555555666777778899999999998885
No 36
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=95.69 E-value=0.053 Score=38.43 Aligned_cols=67 Identities=7% Similarity=0.037 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+..+|..|-.++...|+.+-+...+..+|+.+..-.+-.+...+....-|.|+.+||+..+...
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~ 85 (90)
T 1avs_A 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85 (90)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence 4678889999965555699999999999999998877766666677777778999999999988763
No 37
>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B
Probab=95.62 E-value=0.012 Score=39.50 Aligned_cols=39 Identities=26% Similarity=0.416 Sum_probs=35.1
Q ss_pred HHHHHHHHhhhCC-CHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 9 ~~~i~~F~~iT~~-s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
.+.|++.+++ |- ++..|++.|++++||++.|++-.|++|
T Consensus 13 ~~~l~~L~~M-GF~~~~~~~~AL~~t~gn~e~A~e~L~~~~ 52 (52)
T 2jy5_A 13 QQQLEQLSAM-GFLNREANLQALIATGGDINAAIERLLGSS 52 (52)
T ss_dssp HHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHTTCC
T ss_pred HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHhCc
Confidence 5789999998 77 899999999999999999999888764
No 38
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=95.59 E-value=0.38 Score=37.57 Aligned_cols=67 Identities=10% Similarity=0.112 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|..+-.++...|+.+-+..++..+|+.+....+-.+...+....-|.|+.+||+..+...
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~ 76 (179)
T 2f2o_A 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76 (179)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHH
Confidence 4778899998866556699999999999999999988777777778888888999999999988653
No 39
>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=95.56 E-value=0.015 Score=43.05 Aligned_cols=40 Identities=18% Similarity=0.193 Sum_probs=37.0
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
..++|++.+++ |-++..|+..|+.++||++.|++-.|+++
T Consensus 29 ~ee~I~~Lv~M-GF~~~~A~~AL~~t~gdve~A~e~L~sh~ 68 (83)
T 1veg_A 29 SQESINQLVYM-GFDTVVAEAALRVFGGNVQLAAQTLAHHG 68 (83)
T ss_dssp CHHHHHHHHHH-SCCHHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 46789999998 99999999999999999999999999864
No 40
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=95.56 E-value=0.037 Score=37.53 Aligned_cols=68 Identities=10% Similarity=0.079 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHhc-CCCC-CccchHHHHHHHhhcCCCC--CchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 55 DTRHLEELYNRYK-DPYL-DMILVDGITLLCNDLQVDP--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 55 ~~~~l~~lF~~Y~-~~~~-d~i~~dG~~~~~edLgv~~--ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
....+..+|..|+ .++. ..|+.+-+.+.+..+|..+ ..-.+-.+...+....-|.|+.+||+..+..+
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~ 74 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 3578999999993 3344 6899999999999999776 55444455556666778999999999988764
No 41
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=95.55 E-value=0.55 Score=35.68 Aligned_cols=66 Identities=9% Similarity=0.169 Sum_probs=55.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...|.++|..|-.+....|+.+-+...+..+|.+|....+--+...+....-|.|+.++|+..|..
T Consensus 5 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 70 (143)
T 2obh_A 5 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQ 70 (143)
T ss_dssp HHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHH
Confidence 367888999886555569999999999999999998777766777777777899999999988754
No 42
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=95.46 E-value=0.092 Score=37.12 Aligned_cols=71 Identities=10% Similarity=0.058 Sum_probs=58.3
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCC
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID 125 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~ 125 (250)
....|..+|..|-.+....|+.+-+.+.+..+|..+.+..+-.+...+....-|.|+.++|+..+......
T Consensus 7 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~ 77 (92)
T 2kn2_A 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGG 77 (92)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCC
Confidence 35788999999965555689999999999999998877666666667777778999999999999876543
No 43
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=95.45 E-value=0.041 Score=37.48 Aligned_cols=66 Identities=9% Similarity=0.112 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...+..+|..|-.++...|+.+-+.+.+..+|+.+..-.+-.+...+....-|.|+.++|+..+..
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 467888999996555568999999999999999887766666667777778899999999988765
No 44
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=95.34 E-value=0.13 Score=35.81 Aligned_cols=66 Identities=11% Similarity=-0.031 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+..+|..|-.++...|+.+-+.+.+..+| .+....+-.+...+....-|.|+.+||+..+...
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 10 IADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 47789999999655567999999999999999 7776666666677777788999999999999875
No 45
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=95.34 E-value=0.16 Score=38.82 Aligned_cols=68 Identities=9% Similarity=0.024 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhc-CCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 56 TRHLEELYNRYK-DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 56 ~~~l~~lF~~Y~-~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
...+.++|..|- .+....|+.+-+.+++..+|+.+....+-.+...+....-|.|+.++|+..+....
T Consensus 12 ~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~ 80 (158)
T 2jnf_A 12 VKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFL 80 (158)
T ss_dssp HHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh
Confidence 467888999887 55567999999999999999999877777777778888889999999999998754
No 46
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=95.32 E-value=0.19 Score=37.65 Aligned_cols=65 Identities=9% Similarity=0.153 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
++..+.++|..|-.+....|+.+-+.+++..+|+.+....+-.+... ..-|.|+.++|+..+...
T Consensus 3 s~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~ 67 (145)
T 2bl0_B 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKP 67 (145)
T ss_dssp CHHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSC
T ss_pred CHHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHH
Confidence 34559999999965555689999999999999999876554444433 667899999999998775
No 47
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=95.24 E-value=0.27 Score=37.92 Aligned_cols=120 Identities=10% Similarity=0.099 Sum_probs=76.1
Q ss_pred CCCCCcchHHHHH-HHHhh-hC----CCHHHHHHHHHhCCCCchhh-hhhhhc----cC---------------CCCCcC
Q 025620 1 MHKLSRSNRDKLQ-QFVSI-TG----ASEKAALQALKASDWHLEGA-FDVFYS----QP---------------QSKSLT 54 (250)
Q Consensus 1 m~~l~~~q~~~i~-~F~~i-T~----~s~~~A~~~L~~~~w~le~A-~~~f~~----~~---------------~~~~~~ 54 (250)
|+.||..|.+.++ -|..+ ++ .|...-..+|+..+.++..+ +...+. +. ......
T Consensus 1 Ms~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 80 (148)
T 2lmt_A 1 MSELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETD 80 (148)
T ss_dssp CCSCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTT
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccC
Confidence 7888888876664 45555 21 13455556677666654432 222221 11 011233
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~ 120 (250)
....|.++|..|=.++...|+.+-+.+.+..+|..+.+..+-.|.-.+-...=|.|+.+||++-|.
T Consensus 81 ~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~ 146 (148)
T 2lmt_A 81 TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMIS 146 (148)
T ss_dssp THHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred cHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 456788888888655556888888888888888887766665566666666678888888887664
No 48
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=95.19 E-value=0.13 Score=37.21 Aligned_cols=67 Identities=9% Similarity=0.035 Sum_probs=55.4
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q 025620 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 54 ~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~ 120 (250)
.....+.++|..|-.++...|+.+-+.+.+..+|..+.+-.+--+...+....-|.|+.+||+..+.
T Consensus 26 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp SCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 3568899999999655556899999999999999988776666666677777789999999998775
No 49
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}
Probab=95.12 E-value=0.02 Score=38.58 Aligned_cols=39 Identities=28% Similarity=0.410 Sum_probs=34.7
Q ss_pred HHHHHHHHhhhCC-CHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 9 ~~~i~~F~~iT~~-s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
.+.|++.+++ |- ++..|+..|++++||++.|++-.|+++
T Consensus 12 ~~~l~~L~~M-GF~~~~~~~~AL~~t~gnve~Ave~L~~~~ 51 (53)
T 2knz_A 12 QQQLEQLNSM-GFINREANLQALIATGGDINAAIERLLGSQ 51 (53)
T ss_dssp HHHHHHHHTT-TCCCHHHHHHHHHHHTSCHHHHHHHHHHCC
T ss_pred HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHHcC
Confidence 4679999998 56 899999999999999999999988764
No 50
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=95.10 E-value=0.51 Score=36.45 Aligned_cols=70 Identities=9% Similarity=0.117 Sum_probs=55.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHH----HHhhcCCCCCchHHH-----------HHHHhhcccccccccHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITL----LCNDLQVDPQDIVML-----------VVSWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~----~~edLgv~~ed~~~L-----------vLa~~l~a~~~g~~tr~ef~~g~~ 120 (250)
...+.++|..|-.++...|+.+-+.. ++..+|++|....+- .+...+....-|.|+.+||+..+.
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~~ 85 (176)
T 1nya_A 6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTE 85 (176)
T ss_dssp HHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 46789999999655556899998888 789999999877654 444566677779999999999998
Q ss_pred HcCCC
Q 025620 121 SLGID 125 (250)
Q Consensus 121 ~l~~~ 125 (250)
.....
T Consensus 86 ~~~~~ 90 (176)
T 1nya_A 86 NLIFE 90 (176)
T ss_dssp HHHSS
T ss_pred HHhcC
Confidence 86543
No 51
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=94.92 E-value=0.055 Score=37.36 Aligned_cols=69 Identities=9% Similarity=0.028 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcC-CCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCC
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI 124 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLg-v~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~ 124 (250)
....+. +|..|-.++...|+.+-+...+..+| ..+..-.+-.+...+....-|.|+.++|+..+....+
T Consensus 7 ~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 76 (81)
T 1c7v_A 7 EEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSKN 76 (81)
T ss_dssp CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC--
T ss_pred HHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhh
Confidence 467889 99999655556899999999999999 8877766666667777788899999999999887543
No 52
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=94.91 E-value=0.095 Score=39.00 Aligned_cols=64 Identities=13% Similarity=0.161 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~ 119 (250)
...|.++|+.|=.++...|+.+-+.+.+..||+.+.+-.+-.|...+....=|.|+-+||++-|
T Consensus 35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 4678899999965556799999999999999999877777777777888888999999999865
No 53
>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=94.91 E-value=0.03 Score=39.14 Aligned_cols=40 Identities=28% Similarity=0.419 Sum_probs=36.3
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
.+++|++.+++ |-++..|++.|..++||++.|++-.|+++
T Consensus 9 ~~~~I~~L~~M-GF~~~~a~~AL~~~~~nve~A~e~L~~~~ 48 (63)
T 1wji_A 9 DEKALKHITEM-GFSKEASRQALMDNGNNLEAALNVLLTSN 48 (63)
T ss_dssp CHHHHHHHHTT-TCCHHHHHHHHHHTTSCHHHHHHHHHHHS
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence 46789999996 99999999999999999999999998764
No 54
>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=94.91 E-value=0.02 Score=38.93 Aligned_cols=41 Identities=27% Similarity=0.326 Sum_probs=35.3
Q ss_pred HHHHHHHHhhhCCCH-HHHHHHHHhCCCCchhhhhhhhccCCC
Q 025620 9 RDKLQQFVSITGASE-KAALQALKASDWHLEGAFDVFYSQPQS 50 (250)
Q Consensus 9 ~~~i~~F~~iT~~s~-~~A~~~L~~~~w~le~A~~~f~~~~~~ 50 (250)
.+.|++.+++ |.++ ..+++.|++++||++.|++..|+.+..
T Consensus 10 ~~~l~~L~~M-GF~d~~~n~~AL~~~~Gdv~~Ave~L~~~~~~ 51 (54)
T 2dah_A 10 QVQLEQLRSM-GFLNREANLQALIATGGDVDAAVEKLRQSSGP 51 (54)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhCCCc
Confidence 6789999999 8865 557999999999999999999987643
No 55
>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=94.91 E-value=0.033 Score=41.33 Aligned_cols=39 Identities=21% Similarity=0.383 Sum_probs=36.0
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 9 ~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
.++|++++++ |.++..|++.|..++||++.|++-.|+++
T Consensus 22 ~~~I~qL~~M-GF~~~~a~~AL~~~n~n~e~A~ewL~~h~ 60 (85)
T 2dkl_A 22 SRLIKQLTDM-GFPREPAEEALKSNNMNLDQAMSALLEKK 60 (85)
T ss_dssp HHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHTTS
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHHCc
Confidence 5679999997 99999999999999999999999999875
No 56
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=94.90 E-value=0.28 Score=37.74 Aligned_cols=67 Identities=13% Similarity=0.135 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|..|-.++...|+.+-+..++..+|..+....+-.+...+....-|.|+.+||+..+..+
T Consensus 26 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 92 (166)
T 2aao_A 26 IAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHL 92 (166)
T ss_dssp HHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence 4678889999876556789999999999999999987777777777888888999999999988653
No 57
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=94.79 E-value=0.096 Score=36.18 Aligned_cols=68 Identities=12% Similarity=0.049 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcC--CCCCchHHHH----HHHhhcccccccccHHHHHHHHHHc
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQ--VDPQDIVMLV----VSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLg--v~~ed~~~Lv----La~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
....+..+|..|-.++...|+.+-+...+..+| ..+.+-.+-. +...+....-|.|+.+||+..+..+
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~~ 78 (83)
T 1yx7_A 5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAEL 78 (83)
T ss_dssp SCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHHH
Confidence 346899999999655567899999999999999 5443333222 3334455667999999999776653
No 58
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=94.78 E-value=0.73 Score=37.04 Aligned_cols=100 Identities=10% Similarity=0.117 Sum_probs=71.0
Q ss_pred CHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCC-CHHHHHH
Q 025620 55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID-SLDKFRE 132 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~-~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~-si~~lk~ 132 (250)
+...|.++|..|-.+ ....|+.+-+..++..+|..+....+-.+...+....-|.|+.+||+..+..++.. +.+.++.
T Consensus 20 ~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~ 99 (204)
T 1jba_A 20 DAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKW 99 (204)
T ss_dssp HHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHHH
Confidence 457899999999765 45689999999999999996665555556667777788999999999999987643 4455665
Q ss_pred HHHHHHHH---ccchHHHHHHHHHH
Q 025620 133 RISFMRAE---LKDEQKFREIYNFA 154 (250)
Q Consensus 133 ~l~~L~~~---l~~~~~Fk~~Y~f~ 154 (250)
....++.. .-+..+|+.+..-.
T Consensus 100 ~F~~~D~d~~G~I~~~E~~~~l~~~ 124 (204)
T 1jba_A 100 TFKIYDKDRNGCIDRQELLDIVESI 124 (204)
T ss_dssp HHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred HHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 55544322 11333455555443
No 59
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=94.76 E-value=0.82 Score=36.80 Aligned_cols=68 Identities=9% Similarity=0.013 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
....+.++|..|-.+....|+.+-+...+..+|+.+. ..+-.+...+....-|.|+.+||+..+....
T Consensus 50 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~ 117 (191)
T 3k21_A 50 DVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK 117 (191)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG
T ss_pred HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh
Confidence 3478899999996555679999999999999999887 5555566667777889999999999875543
No 60
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=94.75 E-value=0.32 Score=38.69 Aligned_cols=78 Identities=9% Similarity=0.085 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCCCHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERIS 135 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l~ 135 (250)
...+.++|..+-.+....|+.+-+..++..+|++++. +-.+...+....-|.|+.+||+..+..+.-.+-+.++....
T Consensus 38 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~--~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~F~ 115 (180)
T 3mse_B 38 IKYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWD--INRILQALDINDRGNITYTEFMAGCYRWKNIESTFLKAAFN 115 (180)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHH--HHHHHHHHCTTCCSEECHHHHHHHHSCCTTC--CHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCHHH--HHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCHHHHHHHHH
Confidence 4788999999865556799999999999999998643 33444455667789999999999888654433233443333
No 61
>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.72 E-value=0.03 Score=38.94 Aligned_cols=40 Identities=38% Similarity=0.475 Sum_probs=36.3
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
..+.|++++++ |-++..|++.|+.++||++.|++-.++++
T Consensus 9 ~~~~v~~L~~M-GF~~~~a~~AL~~t~~nve~A~e~L~~~~ 48 (63)
T 2dak_A 9 PEDCVTTIVSM-GFSRDQALKALRATNNSLERAVDWIFSHI 48 (63)
T ss_dssp CHHHHHHHHHH-TCCHHHHHHHHHHTTSCSHHHHHHHHHHH
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 46789999997 99999999999999999999999988753
No 62
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=94.70 E-value=0.095 Score=35.84 Aligned_cols=65 Identities=12% Similarity=0.054 Sum_probs=53.1
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
..+..+|..|-.++...|+.+-+.+.+..+| .+.+-.+-.+...+....-|.|+.+||+..+...
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 5788999999655567899999999999999 6666666566666777778999999999988774
No 63
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=94.69 E-value=0.18 Score=40.77 Aligned_cols=66 Identities=11% Similarity=-0.091 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCC-----CCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVD-----PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~-----~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.+ |..+-.+....|+.+-+.+.+..||++ +..-.+-.+...+....-|.|+.+||+..+..+
T Consensus 32 ~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~ 102 (198)
T 1juo_A 32 QDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL 102 (198)
T ss_dssp CCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred cHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH
Confidence 466777 887754455689999999999999983 455555556666777778999999999988863
No 64
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=94.68 E-value=1 Score=34.08 Aligned_cols=66 Identities=11% Similarity=0.121 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...+.++|..|-.++...|+.+-+...+..+|..|....+-.+.-.+....-|.|+.+||+..+..
T Consensus 9 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~ 74 (148)
T 1exr_A 9 IAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMAR 74 (148)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHh
Confidence 356888898886555669999999999999999998877777777777778899999999988754
No 65
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=94.65 E-value=0.028 Score=39.28 Aligned_cols=47 Identities=26% Similarity=0.398 Sum_probs=42.2
Q ss_pred CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccCCC
Q 025620 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS 50 (250)
Q Consensus 3 ~l~~~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~~~ 50 (250)
.|++.+.+.|...+++ |-++.+|++.|++.+-|+|+|++=-|.++..
T Consensus 14 ~ls~se~e~V~~LvsM-GFs~~qA~kALKat~~NvErAaDWLFSH~D~ 60 (63)
T 1wgn_A 14 MLSPSERQCVETVVNM-GYSYECVLRAMKKKGENIEQILDYLFAHSGP 60 (63)
T ss_dssp TCCHHHHHHHHHHHHH-HCCHHHHHHHHHHHCSCHHHHHHHHHHHSCC
T ss_pred hhCcchHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 4788899999999965 7999999999999999999999999988643
No 66
>1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=94.65 E-value=0.039 Score=39.69 Aligned_cols=41 Identities=29% Similarity=0.406 Sum_probs=37.1
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 025620 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ 49 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~~ 49 (250)
..++|++.+++ |-++..|++.|+.++||++.|++-.|+++.
T Consensus 29 ~~~~v~~L~~M-GF~~~~a~~AL~~t~~nve~Ave~L~~~~~ 69 (73)
T 1wiv_A 29 DQSSVDTLLSF-GFAEDVARKALKASGGDIEKATDWVFNNSG 69 (73)
T ss_dssp CHHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHHSCC
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence 46789999998 999999999999999999999999998753
No 67
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=94.63 E-value=0.14 Score=35.73 Aligned_cols=65 Identities=6% Similarity=-0.013 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchH---HHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIV---MLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~---~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...+.++|..|-.++...|+.+-+...+..+|..+.... +-.+...+....-|.|+. +|+..+..
T Consensus 13 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp HHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 477889999996555568999999999999999987766 555555666666789999 99998875
No 68
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=94.46 E-value=0.71 Score=36.46 Aligned_cols=67 Identities=10% Similarity=0.057 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhcC-CCCCccchHHHHHHHhhc----CCCCCchHHHHHH-----------HhhcccccccccHHHHHHHH
Q 025620 56 TRHLEELYNRYKD-PYLDMILVDGITLLCNDL----QVDPQDIVMLVVS-----------WHMKAATMCEFSKQEFIGGL 119 (250)
Q Consensus 56 ~~~l~~lF~~Y~~-~~~d~i~~dG~~~~~edL----gv~~ed~~~LvLa-----------~~l~a~~~g~~tr~ef~~g~ 119 (250)
..++.++|+.|.| ++...|+.+-+.+.+..+ |..+.+..+-.+. ..+....-|.|+.+||+..+
T Consensus 11 ~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 90 (191)
T 2ccm_A 11 RNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMW 90 (191)
T ss_dssp HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHH
Confidence 4779999999933 344689999999999888 9988776665554 56677778999999999988
Q ss_pred HHc
Q 025620 120 QSL 122 (250)
Q Consensus 120 ~~l 122 (250)
..+
T Consensus 91 ~~~ 93 (191)
T 2ccm_A 91 AEC 93 (191)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
No 69
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=94.45 E-value=0.37 Score=36.05 Aligned_cols=65 Identities=12% Similarity=0.095 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
....+.++|..|-.++...|+.+-+...+..+|+.|....+-.+.. ..-|.|+.+||+..+....
T Consensus 3 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~ 67 (140)
T 1ggw_A 3 DDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPN 67 (140)
T ss_dssp CCTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTS
T ss_pred hHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHh
Confidence 3467889999987655679999999999999999887655444332 6678999999999988764
No 70
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=94.30 E-value=0.16 Score=36.87 Aligned_cols=72 Identities=10% Similarity=0.085 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCCCH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSL 127 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si 127 (250)
...|..+|..|-.+....|+.+-+...+..+|..+.+-.+-.+.-.+....-|.|+.++|+..+......+.
T Consensus 23 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 94 (105)
T 1wlz_A 23 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSSETAATP 94 (105)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC-------
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhccCCCCc
Confidence 478899999996555568999999999999999887766655555666666799999999999887654443
No 71
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=94.26 E-value=0.85 Score=36.76 Aligned_cols=65 Identities=6% Similarity=0.123 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCC--CCCchHHHHHH-------HhhcccccccccHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV--DPQDIVMLVVS-------WHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv--~~ed~~~LvLa-------~~l~a~~~g~~tr~ef~~g~~ 120 (250)
...+.++|..+-.++...|+.+-+...+..+|. .|.+..+-.+. ..+....-|.|+.+||+..+.
T Consensus 35 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~ 108 (208)
T 2hpk_A 35 LSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANR 108 (208)
T ss_dssp -CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 468899999996555679999999999999998 77665555554 666777789999999999986
No 72
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=94.23 E-value=0.19 Score=38.36 Aligned_cols=66 Identities=6% Similarity=0.041 Sum_probs=34.5
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
..+..+|..|-.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+..+
T Consensus 96 ~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 161 (162)
T 1top_A 96 EELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence 345555555543334456666666666666654444333334444444445566666666655443
No 73
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=94.22 E-value=0.74 Score=35.59 Aligned_cols=59 Identities=3% Similarity=-0.138 Sum_probs=44.9
Q ss_pred HHHhcCCCCCccchHHHHHHHhhcCC-----CCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 63 YNRYKDPYLDMILVDGITLLCNDLQV-----DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 63 F~~Y~~~~~d~i~~dG~~~~~edLgv-----~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
|..+-.++...|+.+-+.+.+..||+ .+....+--+...+....-|.|+.+||+..+..
T Consensus 5 F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~ 68 (165)
T 1k94_A 5 YFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA 68 (165)
T ss_dssp HHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 55443333458999999999999998 445555666666777778899999999998876
No 74
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=94.22 E-value=0.44 Score=37.10 Aligned_cols=61 Identities=10% Similarity=-0.118 Sum_probs=47.1
Q ss_pred HHHHhcCCCCCccchHHHHHHHhhcCC-----CCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 62 LYNRYKDPYLDMILVDGITLLCNDLQV-----DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 62 lF~~Y~~~~~d~i~~dG~~~~~edLgv-----~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
.|..+-.+....|+.+-+.+.+..||+ .+....+-.+...+....-|.|+.+||+..+..+
T Consensus 6 ~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~ 71 (167)
T 1gjy_A 6 GYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL 71 (167)
T ss_dssp HHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 366664444568999999999999998 3455556666667777788999999999988763
No 75
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=94.15 E-value=1.1 Score=35.37 Aligned_cols=67 Identities=15% Similarity=0.215 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHH-----HHHhhcCCCCCch-----HHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGIT-----LLCNDLQVDPQDI-----VMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~-----~~~edLgv~~ed~-----~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|..+-.++...|+.+-+. ..+..+|++|... .+-.+...+....-|.|+.+||+..+..+
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~ 95 (195)
T 1qv0_A 19 IKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQL 95 (195)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHHH
Confidence 4778889999865555689999888 6889999998765 34445555667778999999999988764
No 76
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=94.13 E-value=1.5 Score=33.72 Aligned_cols=63 Identities=6% Similarity=-0.013 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCC-CCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv-~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.++|..|-.++...|+.+-+..++..+|+ .+....+-.+.... -|.|+.++|+..+...
T Consensus 24 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~ 87 (166)
T 2mys_B 24 IEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEK 87 (166)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHH
Confidence 467888999886555568999999999999999 88665444333321 5899999999988864
No 77
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=94.10 E-value=0.35 Score=38.68 Aligned_cols=69 Identities=10% Similarity=0.024 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
....+.++|..+-.+....|+.+-+...+..+|+.+....+-.+...+....-|.|+.+||+..+....
T Consensus 35 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~ 103 (204)
T 3e3r_A 35 GIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPM 103 (204)
T ss_dssp -----CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCC
T ss_pred hHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhc
Confidence 346788899998655566999999999999999999887777777777888889999999999887643
No 78
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=94.05 E-value=0.2 Score=38.18 Aligned_cols=64 Identities=13% Similarity=0.160 Sum_probs=31.2
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~ 120 (250)
..+..+|..|-.+....|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..++
T Consensus 96 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 159 (161)
T 3fwb_A 96 DEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICT 159 (161)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 4445555555333334555555555555555554444444444444444445555555555443
No 79
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=93.97 E-value=0.62 Score=38.56 Aligned_cols=69 Identities=10% Similarity=0.021 Sum_probs=52.9
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCc------hHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD------IVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 53 ~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed------~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
......|.++|..|-.++...|+.+-+...+..+|+.|.. ..+--+...+....-|.|+.+||+..+..
T Consensus 12 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~ 86 (263)
T 2f33_A 12 LITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPT 86 (263)
T ss_dssp CCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTS
T ss_pred cccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 3456889999999976556689999999999999876643 33444555667777899999999998754
No 80
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=93.97 E-value=0.28 Score=36.75 Aligned_cols=63 Identities=10% Similarity=0.045 Sum_probs=48.3
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
..+.++|..|-.+....|+.+-+.+++..+|+.|....+-.+.. . .-|.|+.++|+..+....
T Consensus 7 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~---~-~~g~i~~~eF~~~~~~~~ 69 (143)
T 3j04_B 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMS---E-APGPINFTMFLTMFGEKL 69 (143)
T ss_dssp HHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTT---T-SSSCCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHH---h-CCCCcCHHHHHHHHHHHh
Confidence 56788888885545569999999999999999887654433322 2 668999999999998653
No 81
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=93.94 E-value=0.6 Score=33.98 Aligned_cols=63 Identities=11% Similarity=0.093 Sum_probs=53.3
Q ss_pred HHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 59 l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
|.++|..+-.++...|+.+-+..++..+|..+....+-.+...+....-|.|+.+||+..+..
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTC
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH
Confidence 678899886655678999999999999999887777777777788888899999999998863
No 82
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.90 E-value=0.074 Score=34.66 Aligned_cols=39 Identities=28% Similarity=0.534 Sum_probs=34.7
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
..+.|++++++ |-++..|++.|..++ |++.|++-.+++|
T Consensus 9 ~~~~v~~L~~M-GF~~~~a~~AL~~~~-n~e~A~~~L~~h~ 47 (47)
T 2ekk_A 9 NQQQLQQLMDM-GFTREHAMEALLNTS-TMEQATEYLLTHP 47 (47)
T ss_dssp CHHHHHHHHHH-HCCHHHHHHHHHHSC-SHHHHHHHHHTCC
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHcC-CHHHHHHHHHcCC
Confidence 46789999996 999999999999998 9999999888764
No 83
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=93.88 E-value=0.16 Score=37.35 Aligned_cols=68 Identities=12% Similarity=0.083 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
...+.++|..|-.++.+.|+.+-+...+..+|..+....+-.+...+....-|.|+.++|+..+....
T Consensus 31 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~~ 98 (107)
T 2d58_A 31 LEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR 98 (107)
T ss_dssp HHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSSS
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcc
Confidence 36788889888554556899999999999999988777766666777777789999999999887654
No 84
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=93.83 E-value=0.44 Score=34.40 Aligned_cols=66 Identities=9% Similarity=0.034 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL---gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~ 120 (250)
....+..+|..|-.+....|+.+-+.+++..+ |..+.+..+-.+...+....-|.|+.+||+..++
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 39 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 45778888888854445678888888888888 6666655555555555666678888888887664
No 85
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=93.78 E-value=1.7 Score=32.98 Aligned_cols=68 Identities=9% Similarity=0.038 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHH----HhhcCCCCCchHHHHH-----------HHhhcccccccccHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLL----CNDLQVDPQDIVMLVV-----------SWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~----~edLgv~~ed~~~LvL-----------a~~l~a~~~g~~tr~ef~~g~~ 120 (250)
...|.++|..+-.++...|+.+-+... +..+|+.|....+-.+ ...+....-|.|+.+||+..+.
T Consensus 3 ~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~ 82 (166)
T 3akb_A 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAV 82 (166)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTHH
T ss_pred HHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 367889999996555568999887775 5677999877654433 3555666779999999999887
Q ss_pred HcC
Q 025620 121 SLG 123 (250)
Q Consensus 121 ~l~ 123 (250)
...
T Consensus 83 ~~~ 85 (166)
T 3akb_A 83 KRL 85 (166)
T ss_dssp HHH
T ss_pred HHh
Confidence 753
No 86
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=93.75 E-value=0.63 Score=36.66 Aligned_cols=109 Identities=10% Similarity=0.016 Sum_probs=68.9
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCC-----CCch-----hhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchH
Q 025620 8 NRDKLQQFVSITGASEKAALQALKASD-----WHLE-----GAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVD 77 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~~-----w~le-----~A~~~f~~~~~~~~~~~~~~l~~lF~~Y~~~~~d~i~~d 77 (250)
.++.++.++..|+.+++.-..+.+..+ ..|. .++..... .......+..+|..+-.++...|+.+
T Consensus 9 ~~~~l~~l~~~~~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~-----~~~~~~~~~~~f~~~D~d~~G~i~~~ 83 (190)
T 1fpw_A 9 SKDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFP-----FGSPEDFANHLFTVFDKDNNGFIHFE 83 (190)
T ss_dssp TTHHHHHHTTTCCSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCT-----TSCCSHHHHHHHHTCCSSCSSEECHH
T ss_pred CHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcC-----CCCcHHHHHHHHHHHCCCCCCcEeHH
Confidence 455677778778888766555544321 1111 11111110 11234567888888765555688898
Q ss_pred HHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 78 GITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 78 G~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
-+..++..++..+..-.+-.+...+....-|.|+.+||+..+..
T Consensus 84 ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~ 127 (190)
T 1fpw_A 84 EFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127 (190)
T ss_dssp HHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 88888888887665544444445556677789999999988887
No 87
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=93.74 E-value=0.027 Score=37.22 Aligned_cols=64 Identities=11% Similarity=0.106 Sum_probs=49.8
Q ss_pred HHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 59 l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
|.++|..|-.++...|+.+-+..++..+|..+....+-.+...+....-|.|+.+||+..++.+
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~ 65 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTCC
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 3467888865556689999999999999877665555556666777778999999999988654
No 88
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=93.74 E-value=0.29 Score=35.50 Aligned_cols=67 Identities=9% Similarity=0.059 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL---gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
....+..+|..|-.++...|+.+-+.+.+..+ |..+.+..+--+...+....-|.|+.+||+.-+++
T Consensus 39 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 39 TDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 56788899998865555689999998888888 88776665555555666677789999999987765
No 89
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=93.67 E-value=0.53 Score=37.72 Aligned_cols=80 Identities=8% Similarity=0.043 Sum_probs=59.2
Q ss_pred HHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCCCchH-HHHHHHhhcccccccccHHHHHHHHHHcCCCCH-HHHHHH
Q 025620 57 RHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIV-MLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSL-DKFRER 133 (250)
Q Consensus 57 ~~l~~lF~~Y~~~-~~d~i~~dG~~~~~edLgv~~ed~~-~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si-~~lk~~ 133 (250)
..|..+|..|-.. ....|+.+-+..++..+|++|.... +--+...+....-|.|+.+||+..+..++.... +.++..
T Consensus 14 ~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~ 93 (198)
T 2r2i_A 14 TECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWY 93 (198)
T ss_dssp SCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHH
Confidence 5677888888644 3568999999999999999886544 445555667777899999999999999876543 334444
Q ss_pred HHH
Q 025620 134 ISF 136 (250)
Q Consensus 134 l~~ 136 (250)
...
T Consensus 94 F~~ 96 (198)
T 2r2i_A 94 FKL 96 (198)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 90
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=93.65 E-value=1.7 Score=32.64 Aligned_cols=66 Identities=17% Similarity=0.252 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCC
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID 125 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~ 125 (250)
...|.++|..+-.+....|+.+-+ +.+..+|.+| .+-.+...+....-|.|+.+||+..+..+...
T Consensus 5 ~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~ 70 (155)
T 3ll8_B 5 IKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVK 70 (155)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSS
T ss_pred HHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHccc
Confidence 367888999886555568999998 6777888877 33344555677778999999999999886543
No 91
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=93.61 E-value=0.52 Score=34.06 Aligned_cols=67 Identities=7% Similarity=0.060 Sum_probs=46.4
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL---gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
....+..+|..|-.+....|+.+-+.+++..+ |..+.+..+-.+...+....-|.|+.+||+..+++
T Consensus 40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 40 SANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred hHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 45777888887755445678888888888877 66665555555555556666778888888876653
No 92
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=93.60 E-value=1 Score=34.57 Aligned_cols=67 Identities=3% Similarity=-0.201 Sum_probs=40.4
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
....+..+|..|-.++...|+.+-+.+++..+|....+-.+-.+.-.+....=|.|+.+||+..|..
T Consensus 93 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~ 159 (166)
T 2mys_B 93 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH 159 (166)
T ss_pred cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHh
Confidence 3456666777665444456777777777777775554444333444444455577777777776655
No 93
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=93.60 E-value=0.54 Score=33.98 Aligned_cols=66 Identities=6% Similarity=0.033 Sum_probs=45.7
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL---gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~ 120 (250)
....+..+|..|-.++...|+.+-+.+.+..+ |..+.+-.+-.+...+....-|.|+.+||+.-|+
T Consensus 40 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 40 TPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred cHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 45778888888755455678888888888888 6666555544444555556667888888887664
No 94
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2
Probab=93.58 E-value=0.062 Score=37.83 Aligned_cols=37 Identities=22% Similarity=0.088 Sum_probs=33.9
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhh
Q 025620 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45 (250)
Q Consensus 9 ~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~ 45 (250)
.+.|.+.++-||++-..|...|+.+++|++.|+.--=
T Consensus 10 ~~~Vk~LRe~TGag~~dcKkAL~e~~GDi~~Ai~~Lr 46 (64)
T 2cp9_A 10 KELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLH 46 (64)
T ss_dssp CHHHHHHHHHHCCCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 4679999999999999999999999999999998654
No 95
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=93.58 E-value=1.5 Score=33.57 Aligned_cols=77 Identities=13% Similarity=0.178 Sum_probs=61.4
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCC--CCHHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI--DSLDKFRER 133 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~--~si~~lk~~ 133 (250)
..|.++|..|=.++...|+.+=+..++..+|.+|.+..+-.+...+....-|.++.++|+..+..... .+-+.|+..
T Consensus 10 ~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~a 88 (148)
T 2lmt_A 10 AEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREA 88 (148)
T ss_dssp HHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHH
Confidence 56788899986555668999999999999999999888888888888888999999999998876532 233444443
No 96
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=93.58 E-value=0.24 Score=35.32 Aligned_cols=65 Identities=20% Similarity=0.276 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+..+|..|-.++.+.|+.+-+..++..+|++.+.+. .+...+....-|.|+.+||+..+..+
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~--~~~~~~D~d~dg~I~~~EF~~~~~~~ 90 (91)
T 2pmy_A 26 LARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAE--AVFQRLDADRDGAITFQEFARGFLGS 90 (91)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHH--HHHHHHCTTCSSEECHHHHTHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCcCHHHHH--HHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence 367888999997666678999999999999996554433 33345566677999999999988764
No 97
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=93.49 E-value=0.37 Score=34.72 Aligned_cols=67 Identities=16% Similarity=0.130 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~--d~i~~dG~~~~~ed-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.++|.+|-+.+. +.|+.+-+.+++.. ||..+.+..+--+...+....=|.|+-+||+..|..+
T Consensus 8 ~~~l~~~F~~~D~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l 81 (92)
T 3rm1_A 8 VVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMI 81 (92)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 3578889999984322 49999999999999 9988777666666667777788999999999988774
No 98
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=93.46 E-value=0.2 Score=38.03 Aligned_cols=79 Identities=8% Similarity=0.019 Sum_probs=37.8
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHh-hcccccccccHHHHHHHHHH-cCC-CCHHHHHHHH
Q 025620 58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWH-MKAATMCEFSKQEFIGGLQS-LGI-DSLDKFRERI 134 (250)
Q Consensus 58 ~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~-l~a~~~g~~tr~ef~~g~~~-l~~-~si~~lk~~l 134 (250)
.+..+|..+-.++.+.|+.+-...++..+.........+..++. +-...-|.||++||...++. +|. -+.+.++..+
T Consensus 39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 118 (155)
T 3ll8_B 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118 (155)
T ss_dssp THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 44555555543333456666655555555554443333333332 23344456666666665555 232 2334444444
Q ss_pred HH
Q 025620 135 SF 136 (250)
Q Consensus 135 ~~ 136 (250)
..
T Consensus 119 ~~ 120 (155)
T 3ll8_B 119 DK 120 (155)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 99
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=93.38 E-value=0.54 Score=37.74 Aligned_cols=65 Identities=2% Similarity=-0.070 Sum_probs=46.0
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
..+..+|..|-.++...|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+..
T Consensus 93 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 157 (191)
T 1y1x_A 93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF 157 (191)
T ss_dssp HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 45667777775444557888888888888887766555555555566666788888888887765
No 100
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=93.36 E-value=0.22 Score=35.12 Aligned_cols=67 Identities=13% Similarity=0.063 Sum_probs=53.3
Q ss_pred HHHHHHHHHHhc-CCCCC-ccchHHHHHHHhh-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYK-DPYLD-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~-~~~~d-~i~~dG~~~~~ed-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|..|- .++.. .|+.+-+.+.+.. +|..+.+..+-.+...+....-|.|+.+||+..+..+
T Consensus 8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 81 (93)
T 1k2h_A 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 367889999996 35555 8999999999998 9988876666556666666777999999999988764
No 101
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=93.35 E-value=0.63 Score=35.40 Aligned_cols=118 Identities=14% Similarity=0.063 Sum_probs=64.9
Q ss_pred CCCcchHHHHH-HHHhhh-----C-CCHHHHHHHHHhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccc
Q 025620 3 KLSRSNRDKLQ-QFVSIT-----G-ASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMIL 75 (250)
Q Consensus 3 ~l~~~q~~~i~-~F~~iT-----~-~s~~~A~~~L~~~~w~le~A~~~f~~~~~~~~~~~~~~l~~lF~~Y~~~~~d~i~ 75 (250)
.|++.+...++ -|..+- | .+...-..+|+..+.+ .+...+..+|..+-.++.+.|+
T Consensus 6 ~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~-----------------~~~~~~~~l~~~~D~~~~g~i~ 68 (158)
T 2jnf_A 6 KLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQ-----------------QTKSTIRQLIDEFDPFGNGDID 68 (158)
T ss_dssp TSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCS-----------------CSHHHHHHHHHHHCTTCCSEEC
T ss_pred hCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCC-----------------CCHHHHHHHHHHhCCCCCCcCc
Confidence 56666655554 455443 1 2466666777665432 2345677777776544445677
Q ss_pred hHHHHHHHhhcCCCC----Cch-HHHHHHHhhcccccccccHHHHHHHHHHcCCC-CHHHHHHHHHHH
Q 025620 76 VDGITLLCNDLQVDP----QDI-VMLVVSWHMKAATMCEFSKQEFIGGLQSLGID-SLDKFRERISFM 137 (250)
Q Consensus 76 ~dG~~~~~edLgv~~----ed~-~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~-si~~lk~~l~~L 137 (250)
.+-...++....-.. ... .+-.+-..+-...-|.|++++|...++.+|.. |.+.+...+..+
T Consensus 69 ~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~ 136 (158)
T 2jnf_A 69 FDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEI 136 (158)
T ss_dssp HHHHHHHHHHHCCCCCCTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHh
Confidence 777776665543221 111 22222233445556777777777777777754 444455444443
No 102
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=93.34 E-value=0.69 Score=34.84 Aligned_cols=76 Identities=9% Similarity=0.100 Sum_probs=56.0
Q ss_pred HHHHHHHHHhcCCC-CCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC--CCCHHHHHHH
Q 025620 57 RHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG--IDSLDKFRER 133 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~-~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~--~~si~~lk~~ 133 (250)
..+.++|..|-.+. ...|+.+-+...+..+|++|....+-.+...+... |+.++|+..+.... ..+...++..
T Consensus 14 ~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~l~~~ 89 (146)
T 2qac_A 14 VDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEELIKM 89 (146)
T ss_dssp SCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHHHHHH
T ss_pred HHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHHHHHH
Confidence 45788898887556 56899999999999999999877666666666555 99999999998642 2334445444
Q ss_pred HHH
Q 025620 134 ISF 136 (250)
Q Consensus 134 l~~ 136 (250)
...
T Consensus 90 F~~ 92 (146)
T 2qac_A 90 FAH 92 (146)
T ss_dssp HHT
T ss_pred HHH
Confidence 433
No 103
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=93.34 E-value=0.25 Score=37.74 Aligned_cols=78 Identities=12% Similarity=0.180 Sum_probs=59.7
Q ss_pred HHHHHHHHHHhcC--CCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC---CCCHHHH
Q 025620 56 TRHLEELYNRYKD--PYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG---IDSLDKF 130 (250)
Q Consensus 56 ~~~l~~lF~~Y~~--~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~---~~si~~l 130 (250)
...|.++|..|-. +....|+.+-+...+..+|+.|....+-.| ..+....-|.|+.+||+..+.... ..+...+
T Consensus 8 ~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l 86 (156)
T 1wdc_C 8 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADY 86 (156)
T ss_dssp HHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHH
T ss_pred HHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHH
Confidence 3678889998875 556689999999999999999987766666 666667779999999999998864 2334444
Q ss_pred HHHH
Q 025620 131 RERI 134 (250)
Q Consensus 131 k~~l 134 (250)
+...
T Consensus 87 ~~~F 90 (156)
T 1wdc_C 87 MEAF 90 (156)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 104
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=93.34 E-value=0.9 Score=34.47 Aligned_cols=66 Identities=9% Similarity=0.018 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
....+..+|..|-.++...|+.+-+.+++..+|....+-.+-.+.-.+.. .-|.|+.+||++.|..
T Consensus 83 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~I~~~eF~~~~~~ 148 (153)
T 2ovk_B 83 PEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPL-KNKQFNYNKMVDIKGK 148 (153)
T ss_dssp CTTHHHHHHHTTCSSCSSCCCHHHHHHHHHHSSSCCCHHHHHHHHHHCCE-ETTEECHHHHHHHHHC
T ss_pred hHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCC-CCCEEeHHHHHHHHhc
Confidence 35678888888754445678888888888888876666555555555666 6678888888887765
No 105
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=93.33 E-value=0.26 Score=37.05 Aligned_cols=118 Identities=8% Similarity=0.072 Sum_probs=79.3
Q ss_pred CCCcchHHHHH-HHHhh----hC-CCHHHHHHHHHhCCCCchhh-hhhhh---ccCCCCC--------------------
Q 025620 3 KLSRSNRDKLQ-QFVSI----TG-ASEKAALQALKASDWHLEGA-FDVFY---SQPQSKS-------------------- 52 (250)
Q Consensus 3 ~l~~~q~~~i~-~F~~i----T~-~s~~~A~~~L~~~~w~le~A-~~~f~---~~~~~~~-------------------- 52 (250)
.|++.+.+.++ .|..+ .| .+...-..+|...+..+... +...+ +....+.
T Consensus 4 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 83 (153)
T 3ox6_A 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETAD 83 (153)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccc
Confidence 46666655553 45444 23 35677777777777655432 22222 1111100
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhh-cCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q 025620 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCND-LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 53 ~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~ed-Lgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~ 120 (250)
......+..+|..|-.++.+.|+.+-+.+++.. +|..+.+..+-.+...+....-|.|+.+||+..++
T Consensus 84 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 84 MIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 012467889999996555679999999999999 89988877777777777778889999999998764
No 106
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=93.30 E-value=0.19 Score=35.03 Aligned_cols=66 Identities=15% Similarity=0.141 Sum_probs=53.2
Q ss_pred HHHHHHHHHhcC-CCCC-ccchHHHHHHHhh---cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 57 RHLEELYNRYKD-PYLD-MILVDGITLLCND---LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 57 ~~l~~lF~~Y~~-~~~d-~i~~dG~~~~~ed---Lgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
..+.++|..|-. ++.. .|+.+-+.+.+.. +|..+....+-.+...+....-|.|+.+||+..+..+
T Consensus 10 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 80 (90)
T 1k8u_A 10 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 80 (90)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 578899999973 5556 8999999999997 9987776666666666666778999999999988764
No 107
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=93.20 E-value=0.51 Score=36.13 Aligned_cols=66 Identities=11% Similarity=0.128 Sum_probs=53.2
Q ss_pred HHHHHHHHHHhc--CCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYK--DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~--~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.++|..|- .+....|+.+-+..++..||+.|....+-.+...+.... |.|+.+||+..+..+
T Consensus 8 ~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~d~~~-g~i~~~eF~~~~~~~ 75 (159)
T 2ovk_C 8 IEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGE-KAYKLEEILPIYEEM 75 (159)
T ss_dssp HHHHHHHHHHHHHHTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHTTCCSSTTS-CEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCC-CeEcHHHHHHHHHHH
Confidence 467889999985 555568999999999999999998777666666665544 999999999998653
No 108
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=93.14 E-value=0.58 Score=33.73 Aligned_cols=66 Identities=5% Similarity=0.041 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL---gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~ 120 (250)
....+..+|..|-.+....|+.+-+.+++..+ |..+.+-.+-.+...+....-|.|+.+||+..++
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 45678888888854445578888888888887 5655554444444555666678888888887653
No 109
>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=93.14 E-value=0.094 Score=36.08 Aligned_cols=39 Identities=23% Similarity=0.355 Sum_probs=33.9
Q ss_pred HHHHHHHHhhhCC-CHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 9 ~~~i~~F~~iT~~-s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
++.|++.+++ |- ++..+++.|++++||++.|++-.|+.+
T Consensus 18 ~~qi~~L~~M-GF~d~~~~~~AL~~~~gnve~Ave~L~~~~ 57 (58)
T 1wr1_B 18 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLNGD 57 (58)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHTC
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCC
Confidence 5679999998 76 577889999999999999999988764
No 110
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=93.11 E-value=0.95 Score=35.68 Aligned_cols=81 Identities=14% Similarity=0.101 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCCCc-hHHHHHHHhhcccccccccHHHHHHHHHHcCCCCH-HHHH
Q 025620 55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSL-DKFR 131 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~-~~d~i~~dG~~~~~edLgv~~ed-~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si-~~lk 131 (250)
+...|..+|..|... ....|+.+-+..++..+|..+.. ..+--+...+....-|.|+.+||+..+..++.... +.++
T Consensus 23 ~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~ 102 (193)
T 1bjf_A 23 TEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLK 102 (193)
T ss_dssp CHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHHHHHH
Confidence 445677777777533 34589999999999999886643 33344455566777899999999999998875433 3344
Q ss_pred HHHH
Q 025620 132 ERIS 135 (250)
Q Consensus 132 ~~l~ 135 (250)
....
T Consensus 103 ~~f~ 106 (193)
T 1bjf_A 103 WAFS 106 (193)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4333
No 111
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=93.02 E-value=0.72 Score=35.94 Aligned_cols=66 Identities=12% Similarity=0.157 Sum_probs=48.0
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
..+..+|..|-.++...|+.+-+.+++..+|..+.+..+-.+...+....-|.|+.+||+..+..+
T Consensus 74 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 139 (172)
T 2znd_A 74 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL 139 (172)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 456777877755445678888888888888877766655555566666667888888888887764
No 112
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=92.99 E-value=1.8 Score=33.74 Aligned_cols=67 Identities=15% Similarity=0.152 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHH-----HHHhhcCCCCCch-----HHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGIT-----LLCNDLQVDPQDI-----VMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~-----~~~edLgv~~ed~-----~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|..|-.++...|+.+=+. ..+..+|+.|.+. .+-.+...+....-|.|+.+||+..|..+
T Consensus 15 ~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~ 91 (191)
T 1uhk_A 15 IGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKL 91 (191)
T ss_dssp HHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHH
Confidence 4678899999965555689999888 7899999998765 34445555666777999999999988764
No 113
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=92.95 E-value=0.39 Score=34.69 Aligned_cols=67 Identities=7% Similarity=0.018 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL---gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
....+.++|..|-.+....|+.+-+.+++..+ |..+.+-.+-.+...+....-|.|+.+||+..+..
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred hHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 46788888988865555688888888888888 66666555555555566667788999999887753
No 114
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=92.93 E-value=0.3 Score=36.51 Aligned_cols=33 Identities=12% Similarity=0.270 Sum_probs=16.9
Q ss_pred CCCcchHHHHH-HHHhh----hC-CCHHHHHHHHHhCCC
Q 025620 3 KLSRSNRDKLQ-QFVSI----TG-ASEKAALQALKASDW 35 (250)
Q Consensus 3 ~l~~~q~~~i~-~F~~i----T~-~s~~~A~~~L~~~~w 35 (250)
.|++.+...++ -|..+ .| .+...-..+|+..+.
T Consensus 4 ~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~ 42 (147)
T 4ds7_A 4 NLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGL 42 (147)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCC
Confidence 45666555554 34433 12 145666666666553
No 115
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=92.93 E-value=0.39 Score=37.03 Aligned_cols=65 Identities=11% Similarity=0.166 Sum_probs=34.1
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
..+..+|..|-.++.+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+++
T Consensus 101 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 101 EEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 34555555553333345666666666666665554444444444444555566666666655543
No 116
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=92.85 E-value=0.88 Score=35.62 Aligned_cols=50 Identities=6% Similarity=0.060 Sum_probs=20.8
Q ss_pred ccchHHHHHHHhhcCCC-CCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 73 MILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 73 ~i~~dG~~~~~edLgv~-~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
.|+.+-+..++..+|.. +....+-.+...+....-|.|+.+||+..+..+
T Consensus 35 ~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~ 85 (183)
T 1s6c_A 35 VVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSIL 85 (183)
T ss_dssp EECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 44444444444444433 222222223333333344444555554444443
No 117
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=92.77 E-value=0.7 Score=33.34 Aligned_cols=66 Identities=8% Similarity=0.000 Sum_probs=41.4
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL---gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~ 120 (250)
....+..+|..|-.+....|+.+-+.+++..+ |..+.+-.+-.+...+....-|.|+.+||+..++
T Consensus 40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 35667777777754444567777777777777 5555544444444455555567777777776553
No 118
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=92.76 E-value=2.6 Score=32.29 Aligned_cols=67 Identities=7% Similarity=0.089 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcC----CCCCchH-HHH--------HHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQ----VDPQDIV-MLV--------VSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLg----v~~ed~~-~Lv--------La~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.++|..+-.+....|+.+-+...+..+| ++|.+.. +.- |...+. .-|.|+.+||+..+...
T Consensus 5 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~~ 82 (174)
T 1q80_A 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKEM 82 (174)
T ss_dssp HHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHHH
Confidence 46788999999544456899999999999888 9987755 211 222233 56899999999998886
Q ss_pred CC
Q 025620 123 GI 124 (250)
Q Consensus 123 ~~ 124 (250)
..
T Consensus 83 ~~ 84 (174)
T 1q80_A 83 VK 84 (174)
T ss_dssp TT
T ss_pred cC
Confidence 54
No 119
>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A
Probab=92.74 E-value=0.13 Score=33.63 Aligned_cols=37 Identities=24% Similarity=0.389 Sum_probs=31.9
Q ss_pred HHHHHHHHhhhCC-CHHHHHHHHHhCCCCchhhhhhhhc
Q 025620 9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYS 46 (250)
Q Consensus 9 ~~~i~~F~~iT~~-s~~~A~~~L~~~~w~le~A~~~f~~ 46 (250)
.+.|++.+++ |- ++..+++.|++++||++.|++-.|+
T Consensus 8 ~~~i~~L~~M-GF~d~~~~~~AL~~~~gnv~~Ave~L~~ 45 (46)
T 2bwb_A 8 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLN 45 (46)
T ss_dssp HHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHHC
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHc
Confidence 5679999998 76 4777899999999999999998775
No 120
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=92.72 E-value=0.26 Score=33.31 Aligned_cols=66 Identities=12% Similarity=0.139 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHhcC-CCCC-ccchHHHHHHHhh-cCCC---CCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 55 DTRHLEELYNRYKD-PYLD-MILVDGITLLCND-LQVD---PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~-~~~d-~i~~dG~~~~~ed-Lgv~---~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
....+.++|..|-. ++.. .|+.+-+..++.. +|.. ++.+.. +...+....-|.|+.+||+..|..+
T Consensus 5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~--~~~~~D~~~dg~i~~~eF~~~~~~~ 76 (78)
T 1cb1_A 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDD--LFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSH--HHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHH--HHHHhcCCCCCCCcHHHHHHHHHHh
Confidence 45789999999976 5556 8999999999985 8853 333332 3344566667999999999988764
No 121
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=92.72 E-value=1.2 Score=35.03 Aligned_cols=109 Identities=15% Similarity=0.081 Sum_probs=66.3
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhC-----CCCch-----hhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchH
Q 025620 8 NRDKLQQFVSITGASEKAALQALKAS-----DWHLE-----GAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVD 77 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~-----~w~le-----~A~~~f~~~~~~~~~~~~~~l~~lF~~Y~~~~~d~i~~d 77 (250)
.++.++.++..++.++.....+.+.. +..|. .++..... .......+..+|..+-.+....|+.+
T Consensus 9 ~~~el~~~~~~~~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~-----~~~~~~~~~~~f~~~D~d~~G~i~~~ 83 (190)
T 2l2e_A 9 SQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFP-----FGDPSAFAEYVFNVFDADKNGYIDFK 83 (190)
T ss_dssp CHHHHHHHHHHHCSCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCC-----CSCHHHHHHHHHHHHCSSSTTCEEHH
T ss_pred CHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCC-----CCCccHHHHHHHHHhcCCCCCeEeHH
Confidence 34557777777888876666555432 22221 11111110 11234567788888765555678888
Q ss_pred HHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 78 GITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 78 G~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
-+..++..++..+..-.+-.+-..+....-|.|+.+||...+..
T Consensus 84 ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 127 (190)
T 2l2e_A 84 EFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127 (190)
T ss_dssp HHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence 88888888876654444444444556666788888888888776
No 122
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=92.68 E-value=1 Score=36.21 Aligned_cols=51 Identities=8% Similarity=0.034 Sum_probs=22.8
Q ss_pred ccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCC
Q 025620 73 MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI 124 (250)
Q Consensus 73 ~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~ 124 (250)
.|..+-+..++..+|++.+.+.-+.-.+-... .-|.|+++||...+..++.
T Consensus 15 ~l~~~el~~~~~~~~~~~~~i~~~f~~~d~~~-~~G~i~~~ef~~~l~~~~~ 65 (207)
T 2d8n_A 15 ALSKEILEELQLNTKFSEEELCSWYQSFLKDC-PTGRITQQQFQSIYAKFFP 65 (207)
T ss_dssp CCCHHHHHHHHHHSSCCHHHHHHHHHHHHHHC-TTSEEEHHHHHHHHHHTCT
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHHHHHhhC-CCCCCCHHHHHHHHHHhcc
Confidence 45555555555555554444333222221111 2355555555555555543
No 123
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=92.68 E-value=0.23 Score=38.14 Aligned_cols=68 Identities=12% Similarity=0.031 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCC-CCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv-~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
...+..+|..|-.++.+.|+.+-+...+..+|+ .+.+-.+-.+...+....-|.|+.+||+..|..+.
T Consensus 39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 107 (135)
T 3h4s_E 39 VSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLS 107 (135)
T ss_dssp HHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhC
Confidence 467889999995545569999999999999997 66665555555666777789999999999998863
No 124
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=92.38 E-value=0.49 Score=36.06 Aligned_cols=66 Identities=8% Similarity=0.026 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHh--hcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWH--MKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~--l~a~~~g~~tr~ef~~g~~~ 121 (250)
...+..+|..|-.++...|+.+-+.+++..+|..+.+-.+-.+... +....-|.|+.+||+..+..
T Consensus 83 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_C 83 FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150 (156)
T ss_dssp HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence 4566677776644444567777777777777765544443333334 44555677777777776665
No 125
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=92.35 E-value=0.63 Score=35.63 Aligned_cols=68 Identities=6% Similarity=-0.004 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHH--hhcccccccccHHHHHHHHHHc
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW--HMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~--~l~a~~~g~~tr~ef~~g~~~l 122 (250)
....+..+|..|-.++...|+.+-+.+++..+|..+.+-.+-.+.. .+....-|.|+.+||++.|...
T Consensus 83 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 152 (159)
T 2ovk_C 83 AADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAG 152 (159)
T ss_dssp CHHHHHHHHHHTCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCTTCCEEHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCCcEeHHHHHHHHhcC
Confidence 4566777777774444457777777777777776665555444444 4555666778888887777653
No 126
>2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.30 E-value=0.15 Score=37.53 Aligned_cols=40 Identities=20% Similarity=0.336 Sum_probs=36.5
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
..+.|++.+++ |-++..|++.|..++||++.|++-.|++.
T Consensus 29 ~e~~i~~L~~M-GF~~~~a~~AL~~t~~nve~A~ewL~~~~ 68 (83)
T 2dai_A 29 DEAALRQLTEM-GFPENRATKALQLNHMSVPQAMEWLIEHA 68 (83)
T ss_dssp CHHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHHGG
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence 46789999996 99999999999999999999999999764
No 127
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=92.11 E-value=0.96 Score=44.93 Aligned_cols=66 Identities=6% Similarity=-0.064 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc--------CCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL--------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL--------gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.++|+++. +....|+.+-+.+++..+ |..+..-.+-.|...+....-|.|+.+||+..|..+
T Consensus 531 ~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~ 604 (714)
T 3bow_A 531 GDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI 604 (714)
T ss_dssp CHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 468999999998 555689999999999998 777776666667777788888999999999999874
No 128
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=92.05 E-value=2.5 Score=31.29 Aligned_cols=81 Identities=10% Similarity=0.043 Sum_probs=47.6
Q ss_pred CHHHHHHHHHHh---cCCCCCccchHHHHHHHhhc--CCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHcCCC-CH
Q 025620 55 DTRHLEELYNRY---KDPYLDMILVDGITLLCNDL--QVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGID-SL 127 (250)
Q Consensus 55 ~~~~l~~lF~~Y---~~~~~d~i~~dG~~~~~edL--gv~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~~~-si 127 (250)
+...+..+|..| -.++ +.|+.+-...++..+ -.++.....+.-++ .+-...-|.|++++|...++.+|.. |.
T Consensus 42 ~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~ 120 (149)
T 2mys_C 42 TNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTE 120 (149)
T ss_pred CHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCH
Confidence 356677777777 3333 667777777777765 22333333344443 3344556778888888777777754 44
Q ss_pred HHHHHHHHH
Q 025620 128 DKFRERISF 136 (250)
Q Consensus 128 ~~lk~~l~~ 136 (250)
+.+...+..
T Consensus 121 ~~~~~~~~~ 129 (149)
T 2mys_C 121 EEVEELMKG 129 (149)
T ss_pred HHHHHHHhh
Confidence 445544444
No 129
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=92.05 E-value=0.13 Score=39.05 Aligned_cols=68 Identities=16% Similarity=0.147 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhccc--ccccccHHHHHHHHHHcC
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA--TMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~--~~g~~tr~ef~~g~~~l~ 123 (250)
...+.++|..|-.+....|+.+-+...+..+|+.|....+-.+...+... .-|.|+.+||+..+....
T Consensus 9 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~ 78 (151)
T 1w7j_B 9 LEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVA 78 (151)
T ss_dssp --CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHh
Confidence 35688999998765567899999999999999999877666665556555 678999999999988754
No 130
>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=92.04 E-value=0.19 Score=35.01 Aligned_cols=39 Identities=23% Similarity=0.334 Sum_probs=35.4
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCC-CchhhhhhhhccC
Q 025620 9 RDKLQQFVSITGASEKAALQALKASDW-HLEGAFDVFYSQP 48 (250)
Q Consensus 9 ~~~i~~F~~iT~~s~~~A~~~L~~~~w-~le~A~~~f~~~~ 48 (250)
.+.|++.+++ |-++..|++.|..++| |++.|++-.|+++
T Consensus 20 e~~i~~L~~M-GF~~~~a~~AL~~t~~~nve~A~ewL~~~~ 59 (64)
T 2cpw_A 20 GSALDVLLSM-GFPRARAQKALASTGGRSVQTACDWLFSHS 59 (64)
T ss_dssp CCHHHHHHHH-TCCHHHHHHHHHHTTTSCHHHHHHHHHSCC
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHcCCCCHHHHHHHHHhCC
Confidence 3578999996 9999999999999999 9999999999875
No 131
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=91.99 E-value=1.5 Score=35.28 Aligned_cols=76 Identities=9% Similarity=-0.015 Sum_probs=57.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCC--CCHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI--DSLDKFRER 133 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~--~si~~lk~~ 133 (250)
...|.++|..|-.++...|+.+-+..++..||+.+....+-.+...+ -|.|+.++|+..+..... .+...++..
T Consensus 56 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l~~~ 131 (196)
T 3dtp_E 56 VQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDEEDVIVNA 131 (196)
T ss_dssp HHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 47899999999655567999999999999999999776655554444 799999999999987533 344445444
Q ss_pred HH
Q 025620 134 IS 135 (250)
Q Consensus 134 l~ 135 (250)
..
T Consensus 132 F~ 133 (196)
T 3dtp_E 132 FN 133 (196)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 132
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=91.93 E-value=0.48 Score=35.32 Aligned_cols=67 Identities=7% Similarity=0.025 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
....+..+|..|-.++...|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+..
T Consensus 74 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 140 (145)
T 2bl0_B 74 QSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140 (145)
T ss_dssp GHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence 3466677777664444456777777777777776655444444444455555677777777776654
No 133
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=91.93 E-value=0.37 Score=36.30 Aligned_cols=67 Identities=10% Similarity=0.130 Sum_probs=54.6
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
....+..+|..|-.++...|+.+-+.+++..+|..+.+-.+-.+.-.+....-|.|+.+||+..|..
T Consensus 81 ~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 81 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp CTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 4578999999986555568999999999999998887666666666667777899999999988753
No 134
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=91.90 E-value=2.2 Score=40.40 Aligned_cols=65 Identities=11% Similarity=0.108 Sum_probs=56.7
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
..|.++|+.|-.+....|+.+=+...+..||++|.+-.+--|...+....-|.|+.+||+..+..
T Consensus 302 ~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~ 366 (440)
T 3u0k_A 302 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMAR 366 (440)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 67888999887666679999999999999999998888888888888888899999999988765
No 135
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=91.81 E-value=0.49 Score=38.43 Aligned_cols=66 Identities=6% Similarity=0.012 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...|.++|..+-.+....|+.+-+...+..+|..+....+-.|...+....-|.|+.+||+..+..
T Consensus 56 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~ 121 (197)
T 3pm8_A 56 INNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATID 121 (197)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCC
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 467888999885555569999999999999999888777777777777778899999999987654
No 136
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=91.79 E-value=2 Score=35.57 Aligned_cols=68 Identities=7% Similarity=0.006 Sum_probs=31.6
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
....+..+|..+-.++.+.|+.+-+..++..++..+..-.+-.+-..+-...-|.|+++||...++.+
T Consensus 87 ~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~ 154 (224)
T 1s1e_A 87 ASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 154 (224)
T ss_dssp CHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHH
Confidence 34455555555543333455555555555554433322222222223334444556666665555554
No 137
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=91.77 E-value=0.29 Score=36.69 Aligned_cols=100 Identities=10% Similarity=0.055 Sum_probs=66.1
Q ss_pred CHHHHHHHHHhCCCCchh-hhhhhhccCCC---------------CCcCCHHHHHHHHHHhcCCCCCccchHHHHHHHhh
Q 025620 22 SEKAALQALKASDWHLEG-AFDVFYSQPQS---------------KSLTDTRHLEELYNRYKDPYLDMILVDGITLLCND 85 (250)
Q Consensus 22 s~~~A~~~L~~~~w~le~-A~~~f~~~~~~---------------~~~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~ed 85 (250)
+...-..+|+..+.++.. .+...+....+ ........+..+|..|-.++...|+.+-+.+++..
T Consensus 25 ~~~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 104 (143)
T 3j04_B 25 DKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTT 104 (143)
T ss_dssp CHHHHHHHHHHTSCCCCHHHHHTTTTTSSSCCCHHHHHHHHHHTTTSSCCHHHHHHHHTTSCSSSCCCCCTTTHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH
Confidence 566666777766655432 23333332111 11234577888888885444568888888899988
Q ss_pred cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 86 LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 86 Lgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
+|..+.+-.+-.+...+....-|.|+.+||+..|++
T Consensus 105 ~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 140 (143)
T 3j04_B 105 MGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH 140 (143)
T ss_dssp SSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred cCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence 888777666666666667777788999999887764
No 138
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=91.75 E-value=0.6 Score=35.47 Aligned_cols=62 Identities=15% Similarity=0.145 Sum_probs=26.7
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHH
Q 025620 58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119 (250)
Q Consensus 58 ~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~ 119 (250)
.+.++|..|-.++...|+.+-+.+.+..+|..+.+..+--+...+....-|.|+.+||+..|
T Consensus 80 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~ 141 (143)
T 2obh_A 80 EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141 (143)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 34444544432223345555555555555544433333333333333334455555554433
No 139
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=91.64 E-value=2.4 Score=33.03 Aligned_cols=68 Identities=7% Similarity=-0.008 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 54 ~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
.....+..+|..+-.++.+.|+.+-+..++..++..+..-.+-.+-..+-...-|.|+.+||...+..
T Consensus 53 ~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 120 (183)
T 1s6c_A 53 DASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120 (183)
T ss_dssp CCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 34555666666665444445666666666655554333222223333344445566666666655554
No 140
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=91.63 E-value=1.3 Score=36.80 Aligned_cols=64 Identities=11% Similarity=0.095 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCC
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI 124 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~ 124 (250)
+...+..+|..|-.++.+.|+.+-...++..+ ..+-.+-..+-...-|.|+++||...++.+|.
T Consensus 85 ~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~ 148 (220)
T 3sjs_A 85 SPQTALRMMRIFDTDFNGHISFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPALQQLGF 148 (220)
T ss_dssp CHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCC
Confidence 34455555555533333355555555555443 11111112223334455555555555555554
No 141
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=91.61 E-value=0.14 Score=35.67 Aligned_cols=64 Identities=13% Similarity=0.041 Sum_probs=51.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~ 119 (250)
...+.++|..|-.++...|+.+-+.+.+..+|..+..-.+-.+...+....-|.|+.++|+..+
T Consensus 22 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~ 85 (87)
T 1s6j_A 22 IGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 85 (87)
T ss_dssp TTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 3568889999865555689999999999999998877776667777777778999999998643
No 142
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=91.58 E-value=2.9 Score=32.63 Aligned_cols=66 Identities=9% Similarity=0.016 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
....|.+.|..|=.++...|+.+-+.+.+..+|..+.+-.+=-|.-.+... =|.|+-+||++-|++
T Consensus 83 ~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~ 148 (153)
T 3i5g_B 83 PEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGK 148 (153)
T ss_dssp CHHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHC
T ss_pred cHHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcC
Confidence 467899999999655567999999999999999877655443333334433 589999999998865
No 143
>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=91.56 E-value=0.32 Score=35.04 Aligned_cols=40 Identities=25% Similarity=0.441 Sum_probs=35.2
Q ss_pred HHHHHHHHhhhCC-CHHHHHHHHHhCCCCchhhhhhhhccCC
Q 025620 9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQPQ 49 (250)
Q Consensus 9 ~~~i~~F~~iT~~-s~~~A~~~L~~~~w~le~A~~~f~~~~~ 49 (250)
.+.|++.+++ |- ++..+++.|+.++||++.|++-.|..+.
T Consensus 30 e~qi~qL~eM-GF~dr~~~~~AL~~t~Gnve~Ave~L~~~~~ 70 (74)
T 1vej_A 30 QQELEELKAL-GFANRDANLQALVATDGDIHAAIEMLLGASG 70 (74)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHTCCC
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence 5689999998 76 5788899999999999999999998753
No 144
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=91.55 E-value=3.5 Score=31.14 Aligned_cols=76 Identities=12% Similarity=0.138 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC--CCCHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG--IDSLDKFRER 133 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~--~~si~~lk~~ 133 (250)
...+.++|..|-.++...|+.+-+.+.+..+|+.+....+-.+.. ..-|.|+.++|+..+.... ..+...++..
T Consensus 17 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~ 92 (156)
T 1wdc_B 17 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEETIRNA 92 (156)
T ss_dssp HHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCCChHHHHHHH
Confidence 367888999986555679999999999999999987654433332 3458999999999998652 2334444444
Q ss_pred HH
Q 025620 134 IS 135 (250)
Q Consensus 134 l~ 135 (250)
..
T Consensus 93 F~ 94 (156)
T 1wdc_B 93 FA 94 (156)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 145
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=91.43 E-value=2.8 Score=32.28 Aligned_cols=67 Identities=6% Similarity=-0.036 Sum_probs=51.0
Q ss_pred HHHHHHHHHHh-cCCCCCccchHHHHHHHhhcC----CCCCchHHHHH-----------HHhhcccccccccHHHHHHHH
Q 025620 56 TRHLEELYNRY-KDPYLDMILVDGITLLCNDLQ----VDPQDIVMLVV-----------SWHMKAATMCEFSKQEFIGGL 119 (250)
Q Consensus 56 ~~~l~~lF~~Y-~~~~~d~i~~dG~~~~~edLg----v~~ed~~~LvL-----------a~~l~a~~~g~~tr~ef~~g~ 119 (250)
...+..+|..| -.+....|+.+-+..++..+| ..+....+-.| ...+....-|.|+.+||+..+
T Consensus 7 ~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~ 86 (185)
T 2sas_A 7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMW 86 (185)
T ss_dssp HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHH
Confidence 47889999999 333446899999999998888 77765544333 445566777999999999988
Q ss_pred HHc
Q 025620 120 QSL 122 (250)
Q Consensus 120 ~~l 122 (250)
...
T Consensus 87 ~~~ 89 (185)
T 2sas_A 87 EKT 89 (185)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
No 146
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=91.39 E-value=0.18 Score=38.13 Aligned_cols=65 Identities=6% Similarity=0.087 Sum_probs=51.2
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhh-cccccccccHHHHHHHHHHc
Q 025620 58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHM-KAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 58 ~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l-~a~~~g~~tr~ef~~g~~~l 122 (250)
.|.++|..|-.++...|+.+-+..++..+|+.|....+-.+...+ ....-|.|+.++|+..+...
T Consensus 5 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~ 70 (148)
T 1m45_A 5 ANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVN 70 (148)
T ss_dssp CCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHH
Confidence 456678888655566899999999999999999877776676677 77778999999999988775
No 147
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=91.36 E-value=1.1 Score=34.46 Aligned_cols=76 Identities=13% Similarity=0.042 Sum_probs=53.2
Q ss_pred HHHHHhcCCCCCccchHHHHHHHhhcCCCCCc--------hHHHHHHHhhcccccccccHHHHHHHHHHcCCCCHHHHHH
Q 025620 61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQD--------IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRE 132 (250)
Q Consensus 61 ~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed--------~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~ 132 (250)
.+|..+-.+..+.|+.+-...++..+...+.. ..+-.+-..+-...-|.|+++||...+..+| -+.+.++.
T Consensus 62 ~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g-~~~~~~~~ 140 (176)
T 1nya_A 62 YLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG-MSKAEAAE 140 (176)
T ss_dssp HHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT-CCHHHHHH
T ss_pred HHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC-CCHHHHHH
Confidence 77877765555689999988888887766554 1233333345566779999999999999988 56666665
Q ss_pred HHHHH
Q 025620 133 RISFM 137 (250)
Q Consensus 133 ~l~~L 137 (250)
.+..+
T Consensus 141 ~~~~~ 145 (176)
T 1nya_A 141 AFNQV 145 (176)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55554
No 148
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=91.35 E-value=0.44 Score=37.23 Aligned_cols=122 Identities=9% Similarity=0.097 Sum_probs=66.4
Q ss_pred CCCcchHHHHH-HHHhh----hC-CCHHHHHHHHHhCCCCchh-hhhhhh---ccCCCCC----------------cCCH
Q 025620 3 KLSRSNRDKLQ-QFVSI----TG-ASEKAALQALKASDWHLEG-AFDVFY---SQPQSKS----------------LTDT 56 (250)
Q Consensus 3 ~l~~~q~~~i~-~F~~i----T~-~s~~~A~~~L~~~~w~le~-A~~~f~---~~~~~~~----------------~~~~ 56 (250)
.|++.+...++ .|..+ .| .+...-..+|...+.++.. .+...| +....+. ....
T Consensus 4 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~ 83 (179)
T 2f2o_A 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE 83 (179)
T ss_dssp --CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccH
Confidence 45666655543 45444 22 3567777778777665432 233333 1111100 0112
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCC
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI 124 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~ 124 (250)
..+..+|..|-.++...|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+...+.
T Consensus 84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 151 (179)
T 2f2o_A 84 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKGG 151 (179)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC---
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCC
Confidence 44667777775444457888888888888877665555555555566666778888888877766543
No 149
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=91.34 E-value=3.8 Score=32.06 Aligned_cols=115 Identities=12% Similarity=0.045 Sum_probs=74.9
Q ss_pred chHHHHHHHHhhhCCCHHHHHHHHHhC-----CCCchhh-hhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHH
Q 025620 7 SNRDKLQQFVSITGASEKAALQALKAS-----DWHLEGA-FDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGIT 80 (250)
Q Consensus 7 ~q~~~i~~F~~iT~~s~~~A~~~L~~~-----~w~le~A-~~~f~~~~~~~~~~~~~~l~~lF~~Y~~~~~d~i~~dG~~ 80 (250)
-.++.++.....|+.+++....+.+.. +..|... +...+..- .........+..+|..+-.+....|+.+-+.
T Consensus 8 l~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~ 86 (193)
T 1bjf_A 8 LRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNF-FPYGDASKFAEHVFRTFDANGDGTIDFREFI 86 (193)
T ss_dssp CCHHHHHHHHHHSSCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTT-SSSSCCHHHHHHHHHHHCSSCSSEEEHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHh-cCcCChHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 356678888899999987766554432 2222110 01111110 1112235678999999876556789999999
Q ss_pred HHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 81 LLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 81 ~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
.++..++..+..-.+-.+-..+-...-|.|+++||...+..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~ 128 (193)
T 1bjf_A 87 IALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAI 128 (193)
T ss_dssp HHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHH
Confidence 999988876644444444456677788999999999998774
No 150
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=91.28 E-value=3 Score=33.29 Aligned_cols=101 Identities=12% Similarity=0.069 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCC-CCchHHHHHHHhhcccccccccHHHHHHHHHHcCCC-CHHHHH
Q 025620 55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID-SLDKFR 131 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~-~~d~i~~dG~~~~~edLgv~-~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~-si~~lk 131 (250)
+...|..+|..+... ....|+.+-+..++..+|.. +....+-.+...+....-|.|+.+||+..+..++.. +.+.++
T Consensus 31 ~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~ 110 (207)
T 2d8n_A 31 SEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLE 110 (207)
T ss_dssp CHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHH
T ss_pred CHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHH
Confidence 345666666666533 24577777777777777765 333344444455556666778888888777776542 334455
Q ss_pred HHHHHHHHHc---cchHHHHHHHHHHH
Q 025620 132 ERISFMRAEL---KDEQKFREIYNFAF 155 (250)
Q Consensus 132 ~~l~~L~~~l---~~~~~Fk~~Y~f~F 155 (250)
.....++..= -+..+|+.+..-.+
T Consensus 111 ~~f~~~D~d~~G~I~~~E~~~~l~~~~ 137 (207)
T 2d8n_A 111 WAFSLYDVDGNGTISKNEVLEIVMAIF 137 (207)
T ss_dssp HHHHHHCTTCSSEECHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCeEcHHHHHHHHHHHH
Confidence 5555443221 12334555554433
No 151
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=91.26 E-value=2.9 Score=32.69 Aligned_cols=83 Identities=11% Similarity=0.104 Sum_probs=53.3
Q ss_pred CHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCC-CCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCCC-HHHHH
Q 025620 55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDS-LDKFR 131 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~-~~d~i~~dG~~~~~edLgv-~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~s-i~~lk 131 (250)
+...|.++|..|... ....|+.+-+..++..++- ......+-.+...+....-|.|+.+||+..+..++... .+.++
T Consensus 23 ~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~ 102 (190)
T 1g8i_A 23 TEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLR 102 (190)
T ss_dssp CHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCHHHHHH
Confidence 456677777777533 3458999988888888821 22233344445556667789999999999998875432 33444
Q ss_pred HHHHHH
Q 025620 132 ERISFM 137 (250)
Q Consensus 132 ~~l~~L 137 (250)
.....+
T Consensus 103 ~~f~~~ 108 (190)
T 1g8i_A 103 WAFKLY 108 (190)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 444433
No 152
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=91.25 E-value=0.29 Score=34.99 Aligned_cols=65 Identities=14% Similarity=0.075 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhcC-CCCC-ccchHHHHHHH-hhcCC--CCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKD-PYLD-MILVDGITLLC-NDLQV--DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~-~~~d-~i~~dG~~~~~-edLgv--~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.++|..|-. ++.. .|+.+-+.+++ ..+|. +.+++. .+...+....-|.|+.+||+..|..+
T Consensus 9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~--~l~~~~D~d~dG~I~~~EF~~~~~~~ 78 (93)
T 1xk4_A 9 LNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGAD--VWFKELDINTDGAVNFQEFLILVIKM 78 (93)
T ss_dssp HHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHH--HHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHH--HHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 3578899999976 5556 89999999999 78984 344442 33344556667999999999988765
No 153
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=91.14 E-value=0.54 Score=38.40 Aligned_cols=83 Identities=10% Similarity=0.040 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCCCchH-HHHHHHhhcccccccccHHHHHHHHHHcCCCCH-HHHH
Q 025620 55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIV-MLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSL-DKFR 131 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~-~~d~i~~dG~~~~~edLgv~~ed~~-~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si-~~lk 131 (250)
+...|.++|..|-.. ....|+.+-+.+++..+|++|.... +--+...+....-|.|+.+||+..+..++.... +.++
T Consensus 17 s~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~ 96 (211)
T 2ggz_A 17 PTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLK 96 (211)
T ss_dssp -------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHH
Confidence 456778888887543 3568999999999999999875543 444555667777899999999999998875442 3344
Q ss_pred HHHHHH
Q 025620 132 ERISFM 137 (250)
Q Consensus 132 ~~l~~L 137 (250)
.....+
T Consensus 97 ~~F~~~ 102 (211)
T 2ggz_A 97 WYFKLY 102 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 444333
No 154
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=91.10 E-value=1.2 Score=37.68 Aligned_cols=67 Identities=12% Similarity=0.006 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+..+|..+-.++.+.|+.+-+..++..++..+..-.+-.+-..+....-|.|+.+||...+..+
T Consensus 128 ~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~ 194 (256)
T 2jul_A 128 TTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSI 194 (256)
T ss_dssp HHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4456666666544444466666666666665544432222222233344555666666666666654
No 155
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=91.07 E-value=0.73 Score=33.92 Aligned_cols=67 Identities=13% Similarity=0.136 Sum_probs=51.4
Q ss_pred HHHHHHHHHHhcC-CCCC-ccchHHHHHHHhh-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKD-PYLD-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~-~~~d-~i~~dG~~~~~ed-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.++|..|-+ ++.. .|+.+-+..++.. ||..+.+..+--+...+....-|.|+-+||+..+..+
T Consensus 9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 3578899999952 3333 8999999999876 7777666555555566777778999999999998764
No 156
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=91.05 E-value=1.2 Score=34.05 Aligned_cols=67 Identities=10% Similarity=0.073 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhc-CCCCC-ccchHHHHHHHhh-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYK-DPYLD-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~-~~~~d-~i~~dG~~~~~ed-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.++|..|- .++.. .|+.+-+..++.. ||..+.+-.+--+...+....-|.|+-+||+..|...
T Consensus 21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~ 94 (113)
T 2lnk_A 21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 94 (113)
T ss_dssp HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 467889999996 23333 8999999999976 7777766555555666777778999999999988763
No 157
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=90.95 E-value=2.8 Score=39.62 Aligned_cols=66 Identities=11% Similarity=0.117 Sum_probs=55.6
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
..+.++|..+-.+....|+.+-+.+++..+|..+..-.+-.+...+....-|.|+.+||+..|..+
T Consensus 312 ~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~ 377 (450)
T 3sg6_A 312 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 377 (450)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC-
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhh
Confidence 678899999954455689999999999999999987777777777777788999999999999764
No 158
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=90.93 E-value=0.66 Score=36.19 Aligned_cols=67 Identities=12% Similarity=0.101 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|..|-.+....|+.+-+...+..+|..+.+..+-.+...+....-|.|+.+||+..+...
T Consensus 49 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~ 115 (150)
T 2jjz_A 49 LTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK 115 (150)
T ss_dssp HHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS
T ss_pred HHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh
Confidence 4778889998855455689999999999999998877666666666666778999999999988764
No 159
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=90.88 E-value=3.5 Score=32.24 Aligned_cols=83 Identities=13% Similarity=0.048 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCCC-chHHHHHHHhhcccccccccHHHHHHHHHHcCCC-CHHHHH
Q 025620 55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQ-DIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID-SLDKFR 131 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~-~~d~i~~dG~~~~~edLgv~~e-d~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~-si~~lk 131 (250)
+...|.++|..+-.+ ....|+.+-+..++..+|..+. +..+-.+...+....-|.|+.+||+..+..++.. +.+.++
T Consensus 23 ~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~ 102 (190)
T 2l2e_A 23 DKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLI 102 (190)
T ss_dssp CSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHH
Confidence 457788899988654 3568999999999999976532 2233334455667778999999999999887753 345555
Q ss_pred HHHHHH
Q 025620 132 ERISFM 137 (250)
Q Consensus 132 ~~l~~L 137 (250)
.....+
T Consensus 103 ~~f~~~ 108 (190)
T 2l2e_A 103 WAFQLY 108 (190)
T ss_dssp HHHHHH
T ss_pred HHHhHc
Confidence 554444
No 160
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=90.72 E-value=0.58 Score=36.46 Aligned_cols=67 Identities=10% Similarity=0.085 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|..|-.+....|+.+-+...+..+|..+.+..+-.+...+....-|.|+.+||+..+...
T Consensus 47 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~ 113 (147)
T 1wy9_A 47 LEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK 113 (147)
T ss_dssp HHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 4678888888855455689999999999999998877666666666777778999999999988653
No 161
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=90.62 E-value=0.61 Score=33.52 Aligned_cols=65 Identities=5% Similarity=-0.004 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|+.|-.++...|+.+-+..++..+|++.+++.- +-..+....-|.|+.+||+..|...
T Consensus 8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~--i~~~~D~d~dG~i~~~EF~~~~~~~ 72 (92)
T 1fi6_A 8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSH--IWELSDFDKDGALTLDEFCAAFHLV 72 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHH--HHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHH--HHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 4667888988865555689999999999999976544332 2334456667999999999988764
No 162
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=90.61 E-value=0.75 Score=33.85 Aligned_cols=65 Identities=14% Similarity=0.047 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|+.+-.++...|+.+-+.+++..+|++.+. +--+-..+....-|.|+++||+..|+..
T Consensus 10 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~~~~--l~~i~~~~D~d~dG~i~~~EF~~~~~~~ 74 (99)
T 1qjt_A 10 NPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLI--LGKIWDLADTDGKGVLSKQEFFVALRLV 74 (99)
T ss_dssp CTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHH--HHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCHHH--HHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 4688999999965555689999999999999975333 3333334566677999999999998764
No 163
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=90.60 E-value=0.22 Score=38.45 Aligned_cols=41 Identities=20% Similarity=0.370 Sum_probs=35.8
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 025620 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ 49 (250)
Q Consensus 9 ~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~~ 49 (250)
.+.|++.+++=-.++..+++.|..++||++.||+..|+.|.
T Consensus 67 ~~qL~qL~eMGF~d~~~ni~AL~~t~Gdve~AVe~L~~~~~ 107 (108)
T 2cwb_A 67 QPQLQQLRDMGIQDDELSLRALQATGGDIQAALELIFAGGA 107 (108)
T ss_dssp HHHHHHHHTTTCCCHHHHHHHHHHHTSCHHHHHHHHHHTSC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHhCCCHHHHHHHHHhcCC
Confidence 67889999875567899999999999999999999998753
No 164
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=90.59 E-value=0.37 Score=36.74 Aligned_cols=87 Identities=11% Similarity=0.019 Sum_probs=40.2
Q ss_pred CCHHHHHHHHHhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCC---CCCchHHHH
Q 025620 21 ASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQV---DPQDIVMLV 97 (250)
Q Consensus 21 ~s~~~A~~~L~~~~w~le~A~~~f~~~~~~~~~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv---~~ed~~~Lv 97 (250)
.+...-..+|...+..+ +...+..+|..+-.++...|+.+-...++..+.- .+.....+.
T Consensus 36 i~~~e~~~~l~~~~~~~-----------------~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~ 98 (161)
T 1dtl_A 36 ISTKELGKVMRMLGQNP-----------------TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELS 98 (161)
T ss_dssp BCHHHHHHHHHHTTCCC-----------------CHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHH
T ss_pred CcHHHHHHHHHHcCCCC-----------------CHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHH
Confidence 35666666666654322 3445555555555444445555555555544332 222222222
Q ss_pred HHH-hhcccccccccHHHHHHHHHHcCC
Q 025620 98 VSW-HMKAATMCEFSKQEFIGGLQSLGI 124 (250)
Q Consensus 98 La~-~l~a~~~g~~tr~ef~~g~~~l~~ 124 (250)
-++ .+-...-|.|+++||...++.+|.
T Consensus 99 ~~F~~~D~d~~G~i~~~El~~~l~~~g~ 126 (161)
T 1dtl_A 99 DLFRMFDKNADGYIDLEELKIMLQATGE 126 (161)
T ss_dssp HHHHHHCTTCSSEEEHHHHGGGGTTC--
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHhCC
Confidence 222 223344455555555555555553
No 165
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=90.57 E-value=1.2 Score=33.72 Aligned_cols=63 Identities=11% Similarity=0.083 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|..+-.++...|+.+-+..++..+|+.+....+-.+...+ -|.|+.++|+..+...
T Consensus 15 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~g~i~~~eF~~~~~~~ 77 (153)
T 2ovk_B 15 MQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTAFLTLFGEK 77 (153)
T ss_dssp HHHHHHHHHHHCCSTTTCCCHHHHHHHTTTTTSCCCHHHHHHHHHHS----SSCCCSHHHHHTTTTT
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHc----CCCCCHHHHHHHHHHH
Confidence 36788899988655556999999999999999999776655554444 7899999999988763
No 166
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=90.42 E-value=0.68 Score=33.53 Aligned_cols=65 Identities=6% Similarity=0.044 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|..|-.++...|+.+-+..++..+|++.+++.- +-..+....-|.|+.+||+..|...
T Consensus 9 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~--i~~~~D~d~dG~i~~~EF~~~~~~~ 73 (95)
T 1c07_A 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAH--IWSLCDTKDCGKLSKDQFALAFHLI 73 (95)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHH--HHHHHCTTCSSSEETTTHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCHHHHHH--HHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 4778899999965555689999999999999976444322 2334456667999999999988653
No 167
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=90.29 E-value=1.4 Score=33.24 Aligned_cols=81 Identities=15% Similarity=0.067 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHcCCC-CHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGID-SLDKFRER 133 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~~~-si~~lk~~ 133 (250)
...+..+|..+-.+....|+.+-...++....-.......+.-++ .+-...-|.||+++|...++.+|.. |-+.+...
T Consensus 45 ~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~ 124 (148)
T 1exr_A 45 EAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEM 124 (148)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHH
Confidence 345556666554333345555555544433211111111222222 2334445666666666666666543 33444444
Q ss_pred HHH
Q 025620 134 ISF 136 (250)
Q Consensus 134 l~~ 136 (250)
+..
T Consensus 125 ~~~ 127 (148)
T 1exr_A 125 IRE 127 (148)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 168
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=90.28 E-value=1.8 Score=33.74 Aligned_cols=64 Identities=8% Similarity=0.086 Sum_probs=41.7
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
..+..+|..|-.++...|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.+||+..+..
T Consensus 77 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~ 140 (173)
T 1alv_A 77 KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVR 140 (173)
T ss_dssp HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence 45666777775444557878777788888887665443333333344 55678888888877765
No 169
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=90.27 E-value=1.3 Score=32.67 Aligned_cols=68 Identities=9% Similarity=-0.009 Sum_probs=51.1
Q ss_pred HHHHHHHHHHhcCCC-C-CccchHHHHHHHhh-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 56 TRHLEELYNRYKDPY-L-DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~-~-d~i~~dG~~~~~ed-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
...|.++|..|.+.+ . +.|+.+-+.+++.. ||..+.+-.+--+.-.+....=|.|+-+||+..+..+.
T Consensus 10 i~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~~ 84 (98)
T 3n22_A 10 LAVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLALIT 84 (98)
T ss_dssp HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 367888999996332 2 48999999998875 55566655555566666777789999999999887753
No 170
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=90.27 E-value=1.4 Score=34.49 Aligned_cols=111 Identities=11% Similarity=0.047 Sum_probs=75.1
Q ss_pred chHHHHHHHHhhhCCCHHHHHHHHHhC-----CCCch-----hhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccch
Q 025620 7 SNRDKLQQFVSITGASEKAALQALKAS-----DWHLE-----GAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILV 76 (250)
Q Consensus 7 ~q~~~i~~F~~iT~~s~~~A~~~L~~~-----~w~le-----~A~~~f~~~~~~~~~~~~~~l~~lF~~Y~~~~~d~i~~ 76 (250)
-+++.++++...|+.+++.-..+.+.. +..|. .++...+. .......+..+|..+-.+....|+.
T Consensus 8 l~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~-----~~~~~~~~~~~f~~~D~d~~g~i~~ 82 (190)
T 1g8i_A 8 LKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFP-----FGDPTKFATFVFNVFDENKDGRIEF 82 (190)
T ss_dssp CCHHHHHHHHHTSSSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCT-----TSCTHHHHHHHHHHHCTTCSSEEEH
T ss_pred CCHHHHHHHHHccCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCC-----CCChHHHHHHHHHHHhcCCCCeEeH
Confidence 356778999999999977766655543 22221 11221111 1124567899999987666678999
Q ss_pred HHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 77 DGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 77 dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
+-+..++..++..+..-.+-.+-..+....-|.|+.+||...+..+
T Consensus 83 ~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~ 128 (190)
T 1g8i_A 83 SEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAI 128 (190)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHH
Confidence 9999999888766544444444455667778999999999999883
No 171
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=90.27 E-value=0.48 Score=38.21 Aligned_cols=68 Identities=13% Similarity=0.052 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
...+.++|..|-.+....|+.+-+...+..+|+.+.+..+-.+...+....-|.|+.+||+..+..+.
T Consensus 9 ~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~ 76 (188)
T 1s6i_A 9 IGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLN 76 (188)
T ss_dssp TCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHh
Confidence 46789999988655556899999999999999999877777777777888889999999999887653
No 172
>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=90.26 E-value=0.14 Score=35.70 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=35.1
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhC-CCCchhhhhhhhccC
Q 025620 9 RDKLQQFVSITGASEKAALQALKAS-DWHLEGAFDVFYSQP 48 (250)
Q Consensus 9 ~~~i~~F~~iT~~s~~~A~~~L~~~-~w~le~A~~~f~~~~ 48 (250)
.+.|++++++ |-++..|++.|..+ +|+++.|++-.|+++
T Consensus 10 ~~~v~~L~~M-GF~~~~a~~AL~~t~~~nve~A~ewLl~~~ 49 (64)
T 1whc_A 10 LTALESLIEM-GFPRGRAEKALALTGNQGIEAAMDWLMEHE 49 (64)
T ss_dssp CCHHHHHHTT-TCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHhcCCCHHHHHHHHHhCC
Confidence 4579999996 99999999999999 799999999999764
No 173
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=90.25 E-value=0.83 Score=32.49 Aligned_cols=67 Identities=13% Similarity=0.124 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhc-CCCCC-ccchHHHHHHHh-hcC----CCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYK-DPYLD-MILVDGITLLCN-DLQ----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~-~~~~d-~i~~dG~~~~~e-dLg----v~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|..|- .++.. .|+.+-+.+++. .+| ..+....+--+.-.+....-|.|+.+||+..+..+
T Consensus 12 ~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~~ 85 (99)
T 1qls_A 12 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 85 (99)
T ss_dssp HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 357889999996 44445 899999999998 454 55555555555556666778999999999988764
No 174
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=90.19 E-value=0.9 Score=35.57 Aligned_cols=62 Identities=6% Similarity=-0.061 Sum_probs=47.1
Q ss_pred HHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 61 ~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
.+|..|-.++...|+.+-+.+++..+|..+.+-.+-.+.-.+....=|.|+.+||+..+..+
T Consensus 113 ~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~~ 174 (191)
T 1uhk_A 113 ALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGF 174 (191)
T ss_dssp HHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 78888755455689999999999888887766555555556666667889999999888764
No 175
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=90.12 E-value=1.2 Score=34.99 Aligned_cols=67 Identities=7% Similarity=0.019 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc-----------CCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL-----------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL-----------gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
....+.++|..|-.+....|+.+-+...+..+ |..+.+..+-.+...+....-|.|+.+||+..+..
T Consensus 38 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~ 115 (191)
T 3khe_A 38 ETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMD 115 (191)
T ss_dssp TTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 45889999999965556689999999999887 66665556666666777778899999999998754
No 176
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=90.09 E-value=0.64 Score=37.32 Aligned_cols=68 Identities=12% Similarity=0.032 Sum_probs=52.6
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc-CCCCCchHHHHHHHh----hcccccccccHHHHHHHHHHcC
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL-QVDPQDIVMLVVSWH----MKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL-gv~~ed~~~LvLa~~----l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
...+..+|..|-.++...|+.+-+.+++..+ |..+.+-.+-.+... +....=|.|+.+||+..+...+
T Consensus 113 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~ 185 (202)
T 2bec_A 113 RNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMD 185 (202)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTSC
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHhC
Confidence 4678899999865556689999999999999 976655444444444 6666779999999999888765
No 177
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=90.06 E-value=0.94 Score=33.97 Aligned_cols=65 Identities=8% Similarity=0.050 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|..|-.++...|+.+-+.+++...+++.+ .+--+...+....-|.|+.+||+..|..+
T Consensus 13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~--~~~~i~~~~D~d~dG~I~~~EF~~~~~~~ 77 (111)
T 2kgr_A 13 RLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQA--QLASIWNLSDIDQDGKLTAEEFILAMHLI 77 (111)
T ss_dssp HHHHHHHHHTTSCSSCCEEEHHHHHHHHHTTCCCHH--HHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHhCCCCHH--HHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 467888999986545568999999998884444433 33333344566677999999999988764
No 178
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=90.06 E-value=0.63 Score=34.70 Aligned_cols=84 Identities=12% Similarity=0.121 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHcCCC-CHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGID-SLDKFRE 132 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~~~-si~~lk~ 132 (250)
+...+..+|..|-.++...|+.+-...++...--.......+.-++ .+-...-|.||++||...++.+|.. |.+.+..
T Consensus 40 ~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~ 119 (142)
T 2bl0_C 40 EPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAE 119 (142)
T ss_dssp CHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHH
T ss_pred CHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHH
Confidence 3456677777665444456777777666665322222333333333 3344556777777777777777643 4445555
Q ss_pred HHHHHH
Q 025620 133 RISFMR 138 (250)
Q Consensus 133 ~l~~L~ 138 (250)
.+..+.
T Consensus 120 ~~~~~d 125 (142)
T 2bl0_C 120 FLGITE 125 (142)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 554443
No 179
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=89.97 E-value=2.2 Score=33.00 Aligned_cols=64 Identities=5% Similarity=0.036 Sum_probs=37.8
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
..+..+|..|-.++...|+.+-+.+++..+|..+....+-.+...+ ..-|.|+.+||+..+..+
T Consensus 72 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~ 135 (167)
T 1gjy_A 72 NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL 135 (167)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH
Confidence 4566667666544445677777777777777655433332222223 445677777777766653
No 180
>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.93 E-value=0.27 Score=35.28 Aligned_cols=40 Identities=20% Similarity=0.191 Sum_probs=35.5
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCC-CCchhhhhhhhccC
Q 025620 8 NRDKLQQFVSITGASEKAALQALKASD-WHLEGAFDVFYSQP 48 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~~-w~le~A~~~f~~~~ 48 (250)
..+.|++.+++ |-++..|++.|..++ |+++.|++-.|++.
T Consensus 9 ~e~~v~~L~~M-GF~~~~a~~AL~~t~n~~ve~A~ewL~~~~ 49 (74)
T 2dag_A 9 DESVIIQLVEM-GFPMDACRKAVYYTGNSGAEAAMNWVMSHM 49 (74)
T ss_dssp CHHHHHHHHHH-SCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence 46789999996 999999999999998 58999999999754
No 181
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=89.71 E-value=1.1 Score=33.98 Aligned_cols=65 Identities=8% Similarity=0.078 Sum_probs=36.8
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...+..+|..|-.++...|+.+-+.+++..+|..+.+-.+-.+.-.+... -|.|+.+||+..+..
T Consensus 86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_B 86 EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG 150 (156)
T ss_dssp HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred HHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhc
Confidence 45566666666433344666666666666666555444444444444444 566666666666554
No 182
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=89.63 E-value=1.4 Score=33.34 Aligned_cols=63 Identities=6% Similarity=-0.040 Sum_probs=47.6
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 58 ~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
.+..+|..|-.++...|+.+-+.+++..+|++.+. +-.+...+....-|.|+.+||+..+..+
T Consensus 99 ~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~~~~~~--~~~~~~~~D~d~dg~i~~~ef~~~~~~~ 161 (166)
T 3akb_A 99 FLHAALGVADTDGDGAVTVADTARALTAFGVPEDL--ARQAAAALDTDGDGKVGETEIVPAFARY 161 (166)
T ss_dssp HHHHHHHHHCSSSSSCCBHHHHHHHHHHTTCCHHH--HHHHHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCHHH--HHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 38889988865555689999999999999944433 3334445566777999999999998765
No 183
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=89.63 E-value=1.2 Score=33.19 Aligned_cols=67 Identities=10% Similarity=0.082 Sum_probs=50.4
Q ss_pred HHHHHHHHHHhcC-C-CCCccchHHHHHHHhh-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKD-P-YLDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~-~-~~d~i~~dG~~~~~ed-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.+.|..|.+ + +.+.|+.+-+..++.. ||-.+.+-.+=-+--.+-...=|.|+-+||+.-+..+
T Consensus 9 i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~ 82 (101)
T 3nso_A 9 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 82 (101)
T ss_dssp HHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 3678889999963 2 3369999999999985 4666665555555566677778999999999877763
No 184
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=89.60 E-value=5.6 Score=32.82 Aligned_cols=68 Identities=15% Similarity=0.191 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhcCCCC-CccchHHHHHHHhhc-CCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 56 TRHLEELYNRYKDPYL-DMILVDGITLLCNDL-QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~-d~i~~dG~~~~~edL-gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
+..+..++..|...++ ..|+.+-+..++..+ +..+....+-.+...+....-|.|+.+||+.++..++
T Consensus 63 ~~ei~~l~~~F~~~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~ 132 (229)
T 3dd4_A 63 KKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILL 132 (229)
T ss_dssp HHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHc
Confidence 4667778888764433 579988888888875 3344444444566667777789999999999988754
No 185
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=89.55 E-value=1 Score=33.47 Aligned_cols=64 Identities=9% Similarity=0.045 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~ 120 (250)
...+..+|..|-.++...|+.+-+.+++..+|..+.+-.+-.+...+.. .=|.|+.+||+..|.
T Consensus 75 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~ 138 (140)
T 1ggw_A 75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMIL 138 (140)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHh
Confidence 3677777777754444577777777777777766655444444455555 567777777777654
No 186
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=89.46 E-value=0.95 Score=35.65 Aligned_cols=63 Identities=8% Similarity=0.031 Sum_probs=44.5
Q ss_pred HHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 61 ~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
.+|..|-.++...|+.+-+.+++..+|..+.+-.+-.+...+....=|.|+.+||+..+..+.
T Consensus 117 ~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 179 (195)
T 1qv0_A 117 AVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLGFW 179 (195)
T ss_dssp HHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHc
Confidence 778777544456888888888888888877665555555566666678888888888887653
No 187
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=89.45 E-value=2.3 Score=33.98 Aligned_cols=65 Identities=9% Similarity=0.003 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCC
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI 124 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~ 124 (250)
...|.++|..|-.++...|+.+-+..+ ..||++|. +-.|...+....-|.|+.+||+..+.....
T Consensus 28 ~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~ 92 (202)
T 2bec_A 28 LLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRP 92 (202)
T ss_dssp HHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSC
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcc
Confidence 356778899886555568999998888 88999887 334445566677899999999999988653
No 188
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=89.34 E-value=1.3 Score=32.16 Aligned_cols=67 Identities=13% Similarity=0.159 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhc-CCC-CCccchHHHHHHHhh-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYK-DPY-LDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~-~~~-~d~i~~dG~~~~~ed-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.++|..|- .++ ...|+.+=+.+++.. +|..+.+-.+--+...+....-|.|+-+||+..|..+
T Consensus 8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (95)
T 1j55_A 8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (95)
T ss_dssp HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 367889999996 233 358999999999876 6766554444445555677778999999999988753
No 189
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=89.23 E-value=1.7 Score=33.47 Aligned_cols=63 Identities=2% Similarity=-0.075 Sum_probs=32.4
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
..+..+|..|-.++...|+.+-+.+++..+|..+.+-.+-.+...+ ..-|.|+.+||+..+..
T Consensus 70 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~ 132 (165)
T 1k94_A 70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVK 132 (165)
T ss_dssp HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence 4455556655433334566666666666666554332222222222 34466666666666554
No 190
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=89.19 E-value=0.5 Score=31.80 Aligned_cols=34 Identities=18% Similarity=0.214 Sum_probs=30.6
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhh
Q 025620 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDV 43 (250)
Q Consensus 9 ~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~ 43 (250)
.+.|++.|++ |.|...|++.|..+++|++.|.+-
T Consensus 12 ~~~Ia~Lm~m-GFsr~~ai~AL~~a~nnve~Aani 45 (52)
T 2ooa_A 12 DAKIAKLMGE-GYAFEEVKRALEIAQNNVEVARSI 45 (52)
T ss_dssp HHHHHHHHHT-TCCHHHHHHHHHHTTTCHHHHHHH
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHH
Confidence 4789999986 999999999999999999999863
No 191
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=89.08 E-value=5.8 Score=32.68 Aligned_cols=71 Identities=11% Similarity=0.118 Sum_probs=52.5
Q ss_pred CCHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCC-CCchHHHHHHHhhcccccccccHHHHHHHHHHcCC
Q 025620 54 TDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI 124 (250)
Q Consensus 54 ~~~~~l~~lF~~Y~~~-~~d~i~~dG~~~~~edLgv~-~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~ 124 (250)
.+...|.++|+.|... ....|+.+-+..++..+|.. +....+--+...+....-|.|+.+||+..+..++.
T Consensus 48 ~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~ 120 (224)
T 1s1e_A 48 FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLR 120 (224)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHcc
Confidence 3567777777777642 34589999999999999865 34444445556667777899999999999987653
No 192
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=89.02 E-value=1.2 Score=33.53 Aligned_cols=66 Identities=6% Similarity=0.006 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
....+.++|+.|-.++...|+.+=+..++..+|++.+++.-+ ...+....-|.|+.+||+..|...
T Consensus 20 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~gl~~~el~~i--~~~~D~d~dG~I~~~EF~~~m~~~ 85 (110)
T 1iq3_A 20 QREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYI--WELSDADCDGALTLPEFCAAFHLI 85 (110)
T ss_dssp SHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHH--HHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCHHHHHHH--HHHHcCCCCCcCcHHHHHHHHHHH
Confidence 457899999999655556899999999999999877765443 234556667999999999988764
No 193
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=88.97 E-value=6.8 Score=30.44 Aligned_cols=84 Identities=8% Similarity=-0.012 Sum_probs=58.8
Q ss_pred CCHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCC-CchHHHHHHHhhcccccccccHHHHHHHHHHcCCC-CHHHH
Q 025620 54 TDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID-SLDKF 130 (250)
Q Consensus 54 ~~~~~l~~lF~~Y~~~-~~d~i~~dG~~~~~edLgv~~-ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~-si~~l 130 (250)
.+...|.++|+.|... ....|+.+-+..++..+|... ....+-.+...+....-|.|+.+||+..+..++.. +.+.+
T Consensus 22 ~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~ 101 (190)
T 1fpw_A 22 FDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKL 101 (190)
T ss_dssp STHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcHHHH
Confidence 4567888888887643 345899999999999986532 23334444555666778999999999999998754 34455
Q ss_pred HHHHHHH
Q 025620 131 RERISFM 137 (250)
Q Consensus 131 k~~l~~L 137 (250)
+.....+
T Consensus 102 ~~~f~~~ 108 (190)
T 1fpw_A 102 SWAFELY 108 (190)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5544443
No 194
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=88.89 E-value=2.3 Score=33.26 Aligned_cols=64 Identities=9% Similarity=0.058 Sum_probs=47.7
Q ss_pred HHHHHHHHHhcC-----CC-C--CccchHHHHHHHhhcCCCCCchHHHHHHHhhccccccc-ccHHHHHHHHHHcCC
Q 025620 57 RHLEELYNRYKD-----PY-L--DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCE-FSKQEFIGGLQSLGI 124 (250)
Q Consensus 57 ~~l~~lF~~Y~~-----~~-~--d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~-~tr~ef~~g~~~l~~ 124 (250)
..+.++|..+-. ++ . ..|+.+-+.. +..+|.+|..-.++. .+....-|. |+.+||+..+..+.-
T Consensus 20 ~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~~l~~---~~D~d~~G~~I~~~EF~~~~~~~~~ 92 (183)
T 1dgu_A 20 LLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKERICR---VFSTSPAKDSLSFEDFLDLLSVFSD 92 (183)
T ss_dssp HHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHHHHHH---HHSCSSSSCCCCHHHHHHHHHHHST
T ss_pred HHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHHHHHH---HhCCCCCCCEecHHHHHHHHHHhcC
Confidence 456667777754 23 4 6899999999 999999987554333 356666789 999999999987653
No 195
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=88.85 E-value=3.2 Score=33.16 Aligned_cols=69 Identities=10% Similarity=0.003 Sum_probs=55.8
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 54 ~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
.....+..+|..+-.++...|+.+-+..++..++..+..-.+-.+-..+-...-|.|+++||...+..+
T Consensus 56 ~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~ 124 (204)
T 1jba_A 56 EATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESI 124 (204)
T ss_dssp TTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 456789999999876656789999999999999877655555555556677788999999999999876
No 196
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=88.80 E-value=1.5 Score=34.74 Aligned_cols=69 Identities=6% Similarity=0.016 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 54 ~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
.+...+..+|..|-.++.+.|+.+-...++....-....-.+-.+-..+-...-|.||++||...++.+
T Consensus 70 ~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 138 (204)
T 3e3r_A 70 LDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGR 138 (204)
T ss_dssp CCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCT
T ss_pred CCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccc
Confidence 456788889988865555678888877776554332221222333334456667899999999888744
No 197
>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=88.69 E-value=0.46 Score=34.90 Aligned_cols=40 Identities=25% Similarity=0.267 Sum_probs=35.5
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCC-CCchhhhhhhhccC
Q 025620 8 NRDKLQQFVSITGASEKAALQALKASD-WHLEGAFDVFYSQP 48 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~~-w~le~A~~~f~~~~ 48 (250)
..++|++.+++ |-++..|++.|..++ ||++.|++-.|++.
T Consensus 29 ~e~~v~~L~~M-GF~~~~a~~AL~~t~n~n~e~A~ewL~~h~ 69 (84)
T 1vek_A 29 NEEIVAQLVSM-GFSQLHCQKAAINTSNAGVEEAMNWLLSHM 69 (84)
T ss_dssp CHHHHHHHHHH-TCCHHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 46789999997 999999999999884 99999999999764
No 198
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=88.49 E-value=2.2 Score=34.28 Aligned_cols=63 Identities=8% Similarity=0.107 Sum_probs=48.6
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhc----CCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL----gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
..+.++|..|- +....|+.+-+.+.+..+ |..+.+..+=.+...+. ..-|.|+.+||+.-+..
T Consensus 76 ~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~ 142 (174)
T 2i7a_A 76 VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMR 142 (174)
T ss_dssp HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH
Confidence 56788899887 655689999999999999 98876655444444455 66789999999988765
No 199
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=88.42 E-value=1.6 Score=31.27 Aligned_cols=66 Identities=12% Similarity=0.075 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhc-CCCCC-ccchHHHHHHHhh---cC-CCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 56 TRHLEELYNRYK-DPYLD-MILVDGITLLCND---LQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 56 ~~~l~~lF~~Y~-~~~~d-~i~~dG~~~~~ed---Lg-v~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
...|.++|..|- .++.. .|+.+-+..++.. +| ++++.+ =.+...+....-|.|+.+||+..+..+.
T Consensus 9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i--~~~~~~~D~d~dG~I~f~EF~~~~~~~~ 80 (92)
T 2kax_A 9 LTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSI--DDLMKSLDKNSDQEIDFKEYSVFLTMLC 80 (92)
T ss_dssp HHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTH--HHHHHHHTTTCSSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHH--HHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 357889999998 44455 8999999999886 44 333433 3334455667789999999999987643
No 200
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=88.39 E-value=1.4 Score=33.02 Aligned_cols=62 Identities=5% Similarity=0.055 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~ 119 (250)
...+..+|..|-.++.+.|+.+-+.+++..+|..+.+-.+-.+...+ ..=|.|+.+||+.-|
T Consensus 83 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l 144 (146)
T 2qac_A 83 VEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDI 144 (146)
T ss_dssp HHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHH
Confidence 34555555555333334555555555555555443322222222222 334555555555543
No 201
>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4
Probab=88.37 E-value=0.83 Score=30.28 Aligned_cols=41 Identities=12% Similarity=0.196 Sum_probs=35.2
Q ss_pred chHHHHHHHHhh-hCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 025620 7 SNRDKLQQFVSI-TGASEKAALQALKASDWHLEGAFDVFYSQ 47 (250)
Q Consensus 7 ~q~~~i~~F~~i-T~~s~~~A~~~L~~~~w~le~A~~~f~~~ 47 (250)
+..+.++..+++ =+++..+++..|+++++|++.|++.-.+-
T Consensus 3 ~~e~~v~~L~EMFP~~~~~~ik~~L~~~~Gd~d~Ai~~LL~~ 44 (49)
T 1otr_A 3 DHESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKE 44 (49)
T ss_dssp SHHHHHHHHHHHCSSSCHHHHHHHHHHTTTCSHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 345778888888 67789999999999999999999987754
No 202
>2d9s_A CBL E3 ubiquitin protein ligase; UBA domain, dimer, protein binding, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=88.36 E-value=0.7 Score=31.20 Aligned_cols=38 Identities=18% Similarity=0.206 Sum_probs=32.7
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhc
Q 025620 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS 46 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~ 46 (250)
-...|++.|++ |.+.+.|++.|..+++|++.|.+---+
T Consensus 9 ~e~~I~~L~~l-GF~r~~ai~AL~~a~nnve~Aa~iL~e 46 (53)
T 2d9s_A 9 LSSEIERLMSQ-GYSYQDIQKALVIAHNNIEMAKNILRE 46 (53)
T ss_dssp SHHHHHHHHHH-TCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHc-CCCHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 34669999986 999999999999999999999886543
No 203
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=88.26 E-value=7.2 Score=31.88 Aligned_cols=68 Identities=10% Similarity=0.109 Sum_probs=51.8
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhc----CCCCCchHHHH----HHHhhcccccccccHHHHHHHHHH
Q 025620 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDPQDIVMLV----VSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 54 ~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL----gv~~ed~~~Lv----La~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
.....+..+|..|-.+....|+.+-+..++..+ |..+.+..+-- +...+....-|.|+.+||+..+..
T Consensus 100 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~ 175 (263)
T 2f33_A 100 KSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPV 175 (263)
T ss_dssp SCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCT
T ss_pred cHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHH
Confidence 356788999998865555689999999999888 88876554432 444556667799999999988764
No 204
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=88.08 E-value=0.61 Score=34.02 Aligned_cols=66 Identities=8% Similarity=0.152 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhh-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~ed-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.++|..|-+.+ ..|+.+-+..++.. ||..+.+-.+--+...+....-|.|+-+||+..|..+
T Consensus 8 ~~~l~~~F~~fD~~d-g~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~ 78 (96)
T 1a4p_A 8 METMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (96)
T ss_dssp HHHHHHHHHHHHGGG-CSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCC-CeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 357888999996322 38999999888875 6666655455555556677778999999999998764
No 205
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=87.91 E-value=1.2 Score=36.04 Aligned_cols=71 Identities=15% Similarity=0.127 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc-CCCCCchHHHHH----HHhhcccccccccHHHHHHHHHHcCCC
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL-QVDPQDIVMLVV----SWHMKAATMCEFSKQEFIGGLQSLGID 125 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL-gv~~ed~~~LvL----a~~l~a~~~g~~tr~ef~~g~~~l~~~ 125 (250)
....+..+|..|-.++...|+.+-+.+++..+ |..+.+-.+-.+ ...+....=|.|+.+||+..+...++.
T Consensus 111 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~ 186 (208)
T 2ct9_A 111 RSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVE 186 (208)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTTSCGG
T ss_pred HHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccChH
Confidence 35778889998865556799999999999987 977655444333 344566667999999999999887654
No 206
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=87.66 E-value=3.3 Score=32.85 Aligned_cols=67 Identities=6% Similarity=-0.039 Sum_probs=53.2
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
..+..+|..+-.+....|+.+-+..++..++..+..-.+-.+-..+-...-|.|+++||...+..++
T Consensus 52 ~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~ 118 (198)
T 2r2i_A 52 KYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIR 118 (198)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence 4589999998765566899999999999998776544444444556677789999999999999875
No 207
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=87.53 E-value=9.3 Score=30.29 Aligned_cols=69 Identities=9% Similarity=0.097 Sum_probs=58.3
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCC
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI 124 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~ 124 (250)
-..|.++|+.|=.++...|+.+=+...+..||++|.+..+--+...+....-|.++-++|+..+.....
T Consensus 10 i~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~ 78 (176)
T 2lhi_A 10 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLK 78 (176)
T ss_dssp GGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCC
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcc
Confidence 367888999885555569999999999999999999888888888888888899999999988866543
No 208
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=87.51 E-value=2.5 Score=30.67 Aligned_cols=67 Identities=10% Similarity=0.066 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhcCCC--CCccchHHHHHHHhh-cC----CCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPY--LDMILVDGITLLCND-LQ----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~--~d~i~~dG~~~~~ed-Lg----v~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.++|..|.+.+ ++.|+.+-+.+++.. || -.+.+-.+=-+--.+....=|.|+-+||+..+..+
T Consensus 9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 367889999996322 358999999999985 76 23334444444455666777999999999988764
No 209
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=87.45 E-value=2 Score=33.61 Aligned_cols=82 Identities=7% Similarity=-0.007 Sum_probs=45.1
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCCCHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERI 134 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l 134 (250)
....+..+|..+-.++.+.|+.+-...++.........-.+-.+-..+-...-|.||++||...+.. ..-+.+.++..+
T Consensus 85 ~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~-~~~~~~~~~~~~ 163 (191)
T 3khe_A 85 IEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGV-TEVDDETWHQVL 163 (191)
T ss_dssp HHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTTS-SCCCHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHcc-CCCCHHHHHHHH
Confidence 4566777777775444456777777666654433222223333333445556677777777777771 122444555544
Q ss_pred HHH
Q 025620 135 SFM 137 (250)
Q Consensus 135 ~~L 137 (250)
..+
T Consensus 164 ~~~ 166 (191)
T 3khe_A 164 QEC 166 (191)
T ss_dssp HHH
T ss_pred HHh
Confidence 444
No 210
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=87.39 E-value=8.8 Score=31.33 Aligned_cols=81 Identities=14% Similarity=0.051 Sum_probs=55.2
Q ss_pred HHHHHHHHHhcCC--CCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCC--CCHHHHHH
Q 025620 57 RHLEELYNRYKDP--YLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI--DSLDKFRE 132 (250)
Q Consensus 57 ~~l~~lF~~Y~~~--~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~--~si~~lk~ 132 (250)
..+.++|..+-.+ +...|+.+-+...+.. +..+.+..+--+...+....-|.|+.+||+..+..++. .+.+.++.
T Consensus 48 ~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~ 126 (226)
T 2zfd_A 48 EALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHF 126 (226)
T ss_dssp HHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHH
T ss_pred HHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHH
Confidence 5567778877655 5568999988888776 44444443333666677778899999999999998763 23444555
Q ss_pred HHHHHH
Q 025620 133 RISFMR 138 (250)
Q Consensus 133 ~l~~L~ 138 (250)
....++
T Consensus 127 ~F~~~D 132 (226)
T 2zfd_A 127 SFQLYD 132 (226)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 554443
No 211
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=87.37 E-value=0.88 Score=40.55 Aligned_cols=63 Identities=6% Similarity=-0.067 Sum_probs=49.4
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~ 119 (250)
..|..+|..+-.++.+.|+.+-+...+..||+.+.+..+-.|...+....-|.|+-.+|+..+
T Consensus 122 ~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d~~G~I~f~ef~~l~ 184 (323)
T 1ij5_A 122 NILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVA 184 (323)
T ss_dssp HHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSH
T ss_pred HHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHhhh
Confidence 566777776654455689999999999999999987777777777777778999988887643
No 212
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=87.32 E-value=3.5 Score=34.00 Aligned_cols=87 Identities=10% Similarity=0.043 Sum_probs=61.2
Q ss_pred CcCCHHHHHHHHHHhcCCCCCccchHHHHHHHh----hcCC--CCCchHHHHHH----HhhcccccccccHHHHHHH---
Q 025620 52 SLTDTRHLEELYNRYKDPYLDMILVDGITLLCN----DLQV--DPQDIVMLVVS----WHMKAATMCEFSKQEFIGG--- 118 (250)
Q Consensus 52 ~~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~e----dLgv--~~ed~~~LvLa----~~l~a~~~g~~tr~ef~~g--- 118 (250)
+......|.++|..|-.++...|+.+-+.+.+. .||+ .|....+--+. ..+....-|.|+.+||+..
T Consensus 6 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~ 85 (272)
T 2be4_A 6 ANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILP 85 (272)
T ss_dssp CCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHSC
T ss_pred HhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHhh
Confidence 345678999999999755566899999999888 9999 77554433222 3455666799999999999
Q ss_pred --------HHHcC-CCCHHHHHHHHHHHH
Q 025620 119 --------LQSLG-IDSLDKFRERISFMR 138 (250)
Q Consensus 119 --------~~~l~-~~si~~lk~~l~~L~ 138 (250)
+..++ ..+...++.....++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~~F~~~D 114 (272)
T 2be4_A 86 QEENFLLIFRREAPLDNSVEFMKIWRKYD 114 (272)
T ss_dssp HHHHHHHHHHHHSCCCCHHHHHHHHHHHC
T ss_pred hhHHHHHHHhhccCcccHHHHHHHHHHhC
Confidence 44443 345566666555544
No 213
>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}
Probab=87.08 E-value=0.68 Score=35.29 Aligned_cols=34 Identities=29% Similarity=0.357 Sum_probs=30.4
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhh
Q 025620 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFD 42 (250)
Q Consensus 9 ~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~ 42 (250)
.+-|.-.|+=||+|.+.|++.|+.+++|+-.|+-
T Consensus 66 ~edi~lv~~q~~vs~~~A~~aL~~~~gDiv~Ai~ 99 (102)
T 1tr8_A 66 EDDIELVMNQTGASREDATRALQETGGDLAEAIM 99 (102)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHH
Confidence 3558888899999999999999999999999874
No 214
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=86.94 E-value=0.74 Score=34.69 Aligned_cols=64 Identities=6% Similarity=-0.022 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~ 120 (250)
...+..+|..|-.++...|+.+-+.+++..+|..+.+-.+-.+.-.+. ..-|.|+.+||+..+.
T Consensus 86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 149 (151)
T 1w7j_B 86 YEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHIL 149 (151)
T ss_dssp --CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHh
Confidence 355677888875444568999999999999998776655555555666 6778999999998764
No 215
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=86.93 E-value=2.6 Score=32.28 Aligned_cols=65 Identities=12% Similarity=0.003 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+..+|..|-.+....|+.+-+.+++..+|++++.+..+ ...+....-|.|+.+||+..+...
T Consensus 93 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~--~~~~D~d~dg~i~~~ef~~~~~~~ 157 (174)
T 1q80_A 93 EGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPAS--FDAIDTNNDGLLSLEEFVIAGSDF 157 (174)
T ss_dssp HTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTCCGGGHHHH--HHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCCCHHHHHHH--HHHhCCCCCceEeHHHHHHHHHHH
Confidence 36788899988655566899999999999999877654433 334456667899999999988653
No 216
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=86.87 E-value=1 Score=32.71 Aligned_cols=67 Identities=12% Similarity=0.059 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhcC-CCCC-ccchHHHHHHHhh-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKD-PYLD-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~-~~~d-~i~~dG~~~~~ed-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.++|..|-+ ++.. .|+.+-+.+++.. ||..+.+-.+--+...+....-|.|+-+||+..+..+
T Consensus 11 ~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~~ 84 (95)
T 2wcb_A 11 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA 84 (95)
T ss_dssp HHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 3578899999962 3333 8999999998876 6766655555545555566677999999999988753
No 217
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=86.52 E-value=3.3 Score=30.89 Aligned_cols=68 Identities=12% Similarity=0.066 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-cC----CCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-LQ----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~--d~i~~dG~~~~~ed-Lg----v~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
...|.++|..|-+.+. ..|+.+-+.+++.. || -.+.+-.+--+.-.+-...=|.|+-+||+..|..+-
T Consensus 12 ~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~~ 86 (104)
T 3zwh_A 12 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSIA 86 (104)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 3678889999963333 58999999999985 66 333444455555556677789999999999887643
No 218
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=86.41 E-value=1.2 Score=43.74 Aligned_cols=136 Identities=6% Similarity=0.039 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCCCHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERIS 135 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l~ 135 (250)
...|.++|+.+-.++.+.|+.+-+.+++..||+++.+-.+--+.-.+....-|.|+.+||+.-+..+.- -++++....
T Consensus 10 e~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~--~~el~~aF~ 87 (624)
T 1djx_A 10 QHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ--RAEIDRAFE 87 (624)
T ss_dssp ----------------------------------------------------------CTTHHHHHHTC--CHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc--HHHHHHHHH
Confidence 346778888875544568999999999999999876555444444555666799999999999988753 255666665
Q ss_pred HHHHHccchHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHhhcCC-----CCchhHHHHHHHHHhh
Q 025620 136 FMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAE-----KQWPLVDHWCQFLQAK 197 (250)
Q Consensus 136 ~L~~~l~~~~~Fk~~Y~f~F~~~~~~~qk~l~~d~Ai~~W~lll~~-----~~~~~l~~w~~Fl~~~ 197 (250)
.+... ..--.+.++.+|. ....|...+..+.+.++-+-+-++ .+.=-++.|+.||...
T Consensus 88 ~fD~~-~G~Is~~EL~~fL---~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~ 150 (624)
T 1djx_A 88 EAAGS-AETLSVERLVTFL---QHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA 150 (624)
T ss_dssp HHHTT-SSSEEHHHHHHHH---HHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHST
T ss_pred HhcCC-CCeecHHHHHHHH---HHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCc
Confidence 55532 1000133333332 112233446677777776666543 1222367777777654
No 219
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=86.39 E-value=9.4 Score=30.28 Aligned_cols=80 Identities=11% Similarity=0.080 Sum_probs=52.8
Q ss_pred HHHHHHHHHhcCC--CCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCC--CHHHHHH
Q 025620 57 RHLEELYNRYKDP--YLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID--SLDKFRE 132 (250)
Q Consensus 57 ~~l~~lF~~Y~~~--~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~--si~~lk~ 132 (250)
..+.++|+.+-.+ +...|+.+-+...+.. +.......+--+...+....-|.|+.+||+..+..++.. +.+.++.
T Consensus 37 ~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~ 115 (207)
T 2ehb_A 37 EALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKF 115 (207)
T ss_dssp HHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHHHHHH
T ss_pred HHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHHHHHH
Confidence 4566777777654 4568888888877765 333343433335666677778999999999999987643 3344555
Q ss_pred HHHHH
Q 025620 133 RISFM 137 (250)
Q Consensus 133 ~l~~L 137 (250)
....+
T Consensus 116 ~F~~~ 120 (207)
T 2ehb_A 116 AFKLY 120 (207)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 44443
No 220
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=86.24 E-value=6.8 Score=30.67 Aligned_cols=79 Identities=5% Similarity=-0.039 Sum_probs=37.6
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCCCHHHHHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISF 136 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l~~ 136 (250)
..+..+|..+-.+....|+.+-...++..+.-..+ -.+-.+-..+-...-|.||++||...++..++ +.+.+...+..
T Consensus 73 ~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~-~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~-~~~~~~~~~~~ 150 (180)
T 3mse_B 73 WDINRILQALDINDRGNITYTEFMAGCYRWKNIES-TFLKAAFNKIDKDEDGYISKSDIVSLVHDKVL-DNNDIDNFFLS 150 (180)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC---CHHHHHHHHHCTTCSSCBCHHHHHHHTTTSSC-CHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCH-HHHHHHHHHHCCCCCCCCCHHHHHHHHcCCCC-CHHHHHHHHHH
Confidence 45666666664433446666666655554332221 11222222334445566666666666664322 23344444444
Q ss_pred H
Q 025620 137 M 137 (250)
Q Consensus 137 L 137 (250)
+
T Consensus 151 ~ 151 (180)
T 3mse_B 151 V 151 (180)
T ss_dssp H
T ss_pred h
Confidence 3
No 221
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=86.09 E-value=1.3 Score=35.56 Aligned_cols=66 Identities=6% Similarity=-0.145 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
....|..+|..|-.++...|+.+-+.+++ .+|..+.+-.+-.|.-.+....=|.|+.++|++.|..
T Consensus 124 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 189 (196)
T 3dtp_E 124 EEDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTK 189 (196)
T ss_dssp CHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSS
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHc
Confidence 34566666666644344566677766766 6666555444444444444445566777777666543
No 222
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=86.02 E-value=0.92 Score=32.97 Aligned_cols=70 Identities=13% Similarity=0.120 Sum_probs=45.7
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHh---hcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCC
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCN---DLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI 124 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~e---dLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~ 124 (250)
+...+..+|..+-.+..+.|+.+-+..++. ..+..+....+-.+-..+....-|.|+++||...+..+|.
T Consensus 34 ~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~ 106 (134)
T 1jfj_A 34 NEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI 106 (134)
T ss_dssp HHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTC
T ss_pred CHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHHCCCCCCccCHHHHHHHHHHhCH
Confidence 356788888888655556788888877775 2333322223333333445666788999999988887764
No 223
>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}
Probab=85.99 E-value=0.72 Score=35.91 Aligned_cols=41 Identities=32% Similarity=0.518 Sum_probs=36.9
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 025620 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ 49 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~~ 49 (250)
..+.|++.+++ |.++..|++.|..++||++.|++--++++.
T Consensus 78 ~e~~v~~L~~M-GF~~~~a~~AL~~~~~~~e~A~e~L~~~~~ 118 (126)
T 2lbc_A 78 PEEIVAIITSM-GFQRNQAIQALRATNNNLERALDWIFSHPE 118 (126)
T ss_dssp CHHHHHHHHHH-TSCHHHHHHHHHHHTSCHHHHHHHHHTCCS
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 46789999996 999999999999999999999999987753
No 224
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=85.84 E-value=1.1 Score=36.33 Aligned_cols=20 Identities=10% Similarity=-0.109 Sum_probs=8.9
Q ss_pred cccccccccHHHHHHHHHHc
Q 025620 103 KAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 103 ~a~~~g~~tr~ef~~g~~~l 122 (250)
-...-|.||++||...+..+
T Consensus 139 D~d~~G~Is~~El~~~l~~~ 158 (197)
T 3pm8_A 139 DIDGNGKISVEELKRIFGRD 158 (197)
T ss_dssp CTTCSSEECHHHHHHHHC--
T ss_pred CCCCCCCCCHHHHHHHHHhc
Confidence 33444555555555555544
No 225
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=85.60 E-value=3.2 Score=32.50 Aligned_cols=64 Identities=5% Similarity=-0.014 Sum_probs=38.0
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
..+..+|..|-.++...|+.+-+.+++..+|++++.+. .+...+....=|.|+.+||+..+..+
T Consensus 109 ~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~--~~~~~~D~d~dG~i~~~Ef~~~~~~~ 172 (191)
T 2ccm_A 109 KYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCD--AAFDTLSDGGKTMVTREIFARLWTEY 172 (191)
T ss_dssp HHHHHHHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHH--HHHHHHTTTTTSCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHH--HHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence 45666677665444456777777777777774443332 22233444555777777777776653
No 226
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=85.57 E-value=3 Score=33.41 Aligned_cols=62 Identities=10% Similarity=0.134 Sum_probs=49.0
Q ss_pred HHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 59 l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
+..+|..|-.++...|+.+-+.+++..+|++++.+..+ .-.+....=|.|+.+||+..+...
T Consensus 130 ~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~--~~~~D~d~dG~I~~~EF~~~~~~~ 191 (208)
T 2hpk_A 130 SNSYYDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTF--FEKADTDKSGKLERTELVHLFRKF 191 (208)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHHTTSCTTHHHHH--HHHHCTTCCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHHHHhCcCHHHHHHH--HHHhCCCCCCcCcHHHHHHHHHHH
Confidence 78899998765667899999999999999766655433 334556667999999999998875
No 227
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=85.53 E-value=6.1 Score=33.11 Aligned_cols=72 Identities=15% Similarity=0.176 Sum_probs=53.0
Q ss_pred CCHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCC-CCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCC
Q 025620 54 TDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID 125 (250)
Q Consensus 54 ~~~~~l~~lF~~Y~~~-~~d~i~~dG~~~~~edLgv-~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~ 125 (250)
.+...|..+|..|... ....|+.+-+..++..+|- .+.+..+-.+-..+....-|.|+.+||+..+..++..
T Consensus 88 ~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~ 161 (256)
T 2jul_A 88 FTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRG 161 (256)
T ss_dssp SCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhcc
Confidence 3567888888888654 3458999999999999874 3344444445556667778999999999999987644
No 228
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=84.99 E-value=2.9 Score=33.39 Aligned_cols=63 Identities=10% Similarity=0.056 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHcCC
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGI 124 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~~ 124 (250)
+...+.++|..+-.+....|+.+-...++..+ ..+.-++ .+-...-|.|+++||...++.+|.
T Consensus 71 ~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~-------~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~ 134 (198)
T 1juo_A 71 NLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-------NGWRQHFISFDTDRSGTVDPQELQKALTTMGF 134 (198)
T ss_dssp CHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH-------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH-------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCC
Confidence 34455555555543333345555554444432 1222222 223333455555555555555554
No 229
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=84.96 E-value=1.3 Score=35.54 Aligned_cols=70 Identities=6% Similarity=0.026 Sum_probs=39.2
Q ss_pred CHHHHHHHHHHhc---CCCCCccchHHHHHHHhhcCC-CCCchHHHHHHHhhcccccccccHHHHHHHHH-HcCCC
Q 025620 55 DTRHLEELYNRYK---DPYLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ-SLGID 125 (250)
Q Consensus 55 ~~~~l~~lF~~Y~---~~~~d~i~~dG~~~~~edLgv-~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~-~l~~~ 125 (250)
....+..+|..+. +.+.+.|+.+....++..+.- +++.- +-.+-..+-...=|.|+++|+...++ .+|..
T Consensus 57 ~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~-l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ 131 (179)
T 3a8r_A 57 SDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNR-LRTFFDMVDKNADGRLTAEEVKEIIALSASAN 131 (179)
T ss_dssp CHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHHHH-HHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHHHH-HHHHHHHHCCCCCCcCCHHHHHHHHHHHhccc
Confidence 3444555554443 444456777777766665532 34432 11222234556667888888888887 77654
No 230
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=84.86 E-value=5.6 Score=32.11 Aligned_cols=67 Identities=10% Similarity=0.109 Sum_probs=52.6
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
..+..+|..+-.+....|+.+-+..++..++..+..-.+-.+-..+-...-|.|+++||...+..++
T Consensus 57 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~ 123 (211)
T 2ggz_A 57 KHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQ 123 (211)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence 4588999998765566899999999999888766444444444556677789999999999999875
No 231
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=84.81 E-value=3.8 Score=30.50 Aligned_cols=67 Identities=16% Similarity=0.116 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhcC-CCCC-ccchHHHHHHHh-hcCCC---C--CchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKD-PYLD-MILVDGITLLCN-DLQVD---P--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~-~~~d-~i~~dG~~~~~e-dLgv~---~--ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.++|..|-. +... .|+.+=+.+++. .||.. | ....+--+...+....-|.|+.+||+..+..+
T Consensus 11 ~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 85 (113)
T 1xk4_C 11 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARL 85 (113)
T ss_dssp HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence 3678889999974 5555 899999999998 88852 2 33344444455666778999999999988764
No 232
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=84.51 E-value=2.5 Score=34.93 Aligned_cols=64 Identities=13% Similarity=0.022 Sum_probs=50.0
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL---gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
..+..+|..|-.+....|+.+=+.+++..+ |+.++++.. +.-.+....=|.|+.+||+..|...
T Consensus 133 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~--~~~~~D~d~dG~Is~~EF~~~~~~~ 199 (226)
T 2lvv_A 133 FELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATT--VFNEIDTNGSGVVTFDEFSCWAVTK 199 (226)
T ss_dssp HHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHH--HHHHHCCSCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHH--HHHHhCCCCCCcEeHHHHHHHHHhc
Confidence 378888998865555689999999999888 999987433 3344556667999999999988764
No 233
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=83.88 E-value=3.2 Score=36.78 Aligned_cols=63 Identities=5% Similarity=-0.084 Sum_probs=41.9
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHH-HHHhhcccccccccHHHHHHHHHHc
Q 025620 58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLV-VSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 58 ~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~Lv-La~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
.+..+|..|-.++...|+.+-+..++ +|..+.+..+-. |...+....-|.|+.++|+..+...
T Consensus 189 ~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 252 (323)
T 1ij5_A 189 ALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCL 252 (323)
T ss_dssp TSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHH
Confidence 34445666654444578888877777 777766655555 5556666667788888888877664
No 234
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=83.71 E-value=1.2 Score=33.99 Aligned_cols=20 Identities=10% Similarity=0.121 Sum_probs=8.6
Q ss_pred ccccccccHHHHHHHHHHcC
Q 025620 104 AATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 104 a~~~g~~tr~ef~~g~~~l~ 123 (250)
...-|.|++++|...+..+|
T Consensus 110 ~d~~G~i~~~e~~~~l~~~~ 129 (166)
T 2aao_A 110 KDGSGYITPDELQQACEEFG 129 (166)
T ss_dssp TTCSSSBCHHHHHHHTCC--
T ss_pred CCCCCcCcHHHHHHHHHHcC
Confidence 33344555555555544444
No 235
>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=83.47 E-value=1.4 Score=29.85 Aligned_cols=40 Identities=8% Similarity=0.144 Sum_probs=35.1
Q ss_pred HHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 025620 10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ 49 (250)
Q Consensus 10 ~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~~ 49 (250)
.+++++.++==++++.-++.|++++||++.||+.-.+.+.
T Consensus 11 ~~L~~L~eMGF~D~~~N~~aL~~~~gnv~~aI~~Ll~~~~ 50 (54)
T 2cp8_A 11 ALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLSG 50 (54)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHTTTTTCHHHHHHHHHHHSS
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHHHhccC
Confidence 4789999987789999999999999999999998876543
No 236
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=83.29 E-value=4 Score=29.39 Aligned_cols=65 Identities=8% Similarity=-0.017 Sum_probs=46.4
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhh-----cCCCCCch-----------HHHHHHHhhcccccccccHHHHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCND-----LQVDPQDI-----------VMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~ed-----Lgv~~ed~-----------~~LvLa~~l~a~~~g~~tr~ef~~g~~ 120 (250)
..+..+|..|-.++...|+.+=+..++.. +|..+.+. .+--+.-.+....=|.||.+||+..+.
T Consensus 20 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 99 (103)
T 1snl_A 20 FNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 99 (103)
T ss_dssp CCHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHh
Confidence 45788899885444568999999888885 68776542 122233445666779999999999876
Q ss_pred H
Q 025620 121 S 121 (250)
Q Consensus 121 ~ 121 (250)
+
T Consensus 100 ~ 100 (103)
T 1snl_A 100 R 100 (103)
T ss_dssp C
T ss_pred c
Confidence 4
No 237
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=83.04 E-value=3.5 Score=30.80 Aligned_cols=64 Identities=6% Similarity=0.015 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+.++|+.|-. +...|+.+=+...+..+|++.+.+.- +--......-|.|+.+||+..|...
T Consensus 14 ~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~gl~~~el~~--i~~~~D~d~dG~id~~EF~~~m~~~ 77 (106)
T 1eh2_A 14 KAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKLPVDILGR--VWELSDIDHDGMLDRDEFAVAMFLV 77 (106)
T ss_dssp HHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTTCCHHHHHH--HHHHHCSSCSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcCCCHHHHHH--HHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 3667788888765 55689999999999999976544322 2233456667999999999888663
No 238
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=82.97 E-value=3 Score=32.06 Aligned_cols=65 Identities=9% Similarity=0.136 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...+..+|..|-.+....|+.+-+.+++..+|++.+.+..+ ...+....=|.|+.+||+..+...
T Consensus 104 ~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~--~~~~D~d~dG~i~~~ef~~~~~~~ 168 (185)
T 2sas_A 104 QNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAV--YNVITDGGKVTFDLNRYKELYYRL 168 (185)
T ss_dssp HHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHH--HHHHHTTTTSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHH--HHHhcCCCCCcCcHHHHHHHHHHH
Confidence 36788888888655556899999999999999876665433 233455566889999999888764
No 239
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=82.79 E-value=0.75 Score=35.85 Aligned_cols=65 Identities=25% Similarity=0.319 Sum_probs=49.2
Q ss_pred CCCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccCCC-CCcCCHHHHHHHHHHhc
Q 025620 2 HKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS-KSLTDTRHLEELYNRYK 67 (250)
Q Consensus 2 ~~l~~~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~~~-~~~~~~~~l~~lF~~Y~ 67 (250)
+.|++.+++.|.+++++ |-++..|++-|.+++.+.+.|++--+....- .+..+...++..++.+.
T Consensus 2 ~~l~~~e~~~v~~l~~M-GFp~~~~~kAl~~~g~~~e~amewL~~h~~L~d~~~d~~~~e~~l~~~~ 67 (118)
T 4ae4_A 2 SHMSPSERQCVETVVNM-GYSYECVLRAMKAAGANIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQ 67 (118)
T ss_dssp CCSCHHHHHHHHHHHHT-TCCHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHCS
T ss_pred CCCCHHHHHHHHHHHHc-CCCHHHHHHHHHHHCcCHHHHHHHHHHhchhcccCCChhhhHHHHHhcc
Confidence 35899999999999986 9999999999999988999999988865210 01224455666666654
No 240
>1vdl_A Ubiquitin carboxyl-terminal hydrolase 25; UBA domain, mouse cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.5.2.1
Probab=82.53 E-value=2 Score=30.99 Aligned_cols=41 Identities=32% Similarity=0.314 Sum_probs=34.7
Q ss_pred hHHHHHHHHhhhCCC-HHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 8 NRDKLQQFVSITGAS-EKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 8 q~~~i~~F~~iT~~s-~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
++-.++|..+|||+. ...-.+.|++++-||..|+.---+.+
T Consensus 24 ~q~lLnQLrEITGiqD~~~L~~ALkas~Gdl~~AV~~LT~~~ 65 (80)
T 1vdl_A 24 QQTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAKN 65 (80)
T ss_dssp HHHHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHhccCCHHHHHHHHhccc
Confidence 344789999999998 67788999999999999998766654
No 241
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=82.19 E-value=7.4 Score=31.06 Aligned_cols=50 Identities=12% Similarity=-0.122 Sum_probs=37.5
Q ss_pred CccchHHHHHHHhhc------CCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 72 DMILVDGITLLCNDL------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 72 d~i~~dG~~~~~edL------gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
..|+.+-+...+..| |..+..-.+--+.-.+....-|.|+.+||+..|..
T Consensus 19 G~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~ 74 (174)
T 2i7a_A 19 SDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKR 74 (174)
T ss_dssp CCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 479999999999998 55665444444555666777899999999998865
No 242
>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=82.17 E-value=2.9 Score=29.48 Aligned_cols=41 Identities=22% Similarity=0.154 Sum_probs=34.6
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 025620 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ 49 (250)
Q Consensus 9 ~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~~ 49 (250)
.+.|++.+++=-.++...++.|+.++.|++.||+--|+.+.
T Consensus 20 ~~ql~qL~~MGF~d~~an~~AL~at~Gnve~Ave~L~~~~~ 60 (67)
T 2dna_A 20 SKEMECLQAMGFVNYNANLQALIATDGDTNAAIYKLKSSQG 60 (67)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHTTSCHHHHHHHHHHCCS
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 45788888875566777799999999999999999998764
No 243
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=82.04 E-value=4.2 Score=33.38 Aligned_cols=66 Identities=9% Similarity=0.048 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcC-------CCCCchHHHH--HHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQ-------VDPQDIVMLV--VSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLg-------v~~ed~~~Lv--La~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...+..+|..|-.++...|+.+-+.+++..+| ++++++..++ +.-.+....=|.|+.+||+..+..
T Consensus 128 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 202 (214)
T 2l4h_A 128 DIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 202 (214)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 35788888888655556888888888888775 3444444322 334445556688888888887764
No 244
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=81.99 E-value=2.6 Score=32.83 Aligned_cols=64 Identities=11% Similarity=0.167 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHh-hcccccccccHHHHHHHHHHc
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWH-MKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~-l~a~~~g~~tr~ef~~g~~~l 122 (250)
....+.++|+++. +....|+.+=+..++...|++.+.+ -=.|. .....-|.++++||+.+|.-.
T Consensus 31 e~~~y~~iF~~lD-~~dG~Isg~elr~~~~~sgLp~~~L---~~Iw~laD~d~dG~Ld~~EF~~aM~Li 95 (121)
T 3fia_A 31 ERAKHDQQFHSLK-PISGFITGDQARNFFFQSGLPQPVL---AQIWALADMNNDGRMDQVEFSIAMKLI 95 (121)
T ss_dssp HHHHHHHHHHHTC-CBTTBEEHHHHHHHHGGGCCCHHHH---HHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHcCCCHHHH---HHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence 3578899999995 4556899999999999999975543 22233 355667999999999998764
No 245
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=81.79 E-value=5.8 Score=29.11 Aligned_cols=77 Identities=13% Similarity=0.020 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhcCCC---CCccchHHHHHHHhhcC-CCCCc----hHHHHHHHhhcccccccccHHHHHHHHHHcCCCCH
Q 025620 56 TRHLEELYNRYKDPY---LDMILVDGITLLCNDLQ-VDPQD----IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSL 127 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~---~d~i~~dG~~~~~edLg-v~~ed----~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si 127 (250)
...|.++|..|-..+ .+.|+.+-+..++..++ -.+.+ -.+=-+.-.+....=|.|+-+||+..|..+...--
T Consensus 10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~~~~~ 89 (100)
T 3nxa_A 10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGITGPIA 89 (100)
T ss_dssp HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHHGGGH
T ss_pred HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 367889999996532 46999999999998644 33322 12333333445666799999999999988655444
Q ss_pred HHHHH
Q 025620 128 DKFRE 132 (250)
Q Consensus 128 ~~lk~ 132 (250)
..++.
T Consensus 90 ~~~~~ 94 (100)
T 3nxa_A 90 KLIHE 94 (100)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 44443
No 246
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=81.54 E-value=1.7 Score=31.83 Aligned_cols=65 Identities=12% Similarity=0.103 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhh-----cCC--CCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCND-----LQV--DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~ed-----Lgv--~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...|.++|..|-.. .+.|+.+-+..++.. ||. .+.+-.+--+...+....-|.|+-+||+..|..
T Consensus 9 ~~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (100)
T 1psr_A 9 IIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 36788899999643 358999999988876 554 333222222334456667899999999998865
No 247
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=81.31 E-value=0.44 Score=34.43 Aligned_cols=65 Identities=11% Similarity=0.058 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL---gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~ 120 (250)
...+..+|..|-.++...|+.+-+.+++..+ |..+.+-.+-.+...+....-|.|+.+||+..++
T Consensus 40 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 40 SSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp SSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 4567888888754445678888888888888 6655444433444455566678899999988764
No 248
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=81.09 E-value=2.4 Score=29.03 Aligned_cols=41 Identities=10% Similarity=0.169 Sum_probs=34.8
Q ss_pred hHHHHHHHHhhh-CCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 8 NRDKLQQFVSIT-GASEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 8 q~~~i~~F~~iT-~~s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
..+.|.++.++- +.+..+.+..|++++.|++.||+..++-.
T Consensus 9 ~ee~l~~L~emFP~ld~~~I~~vL~a~~gdvd~aI~~LL~m~ 50 (59)
T 1wgl_A 9 SEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMG 50 (59)
T ss_dssp CHHHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHHHHHHHSS
T ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHcCc
Confidence 356778887765 67899999999999999999999999654
No 249
>2zc2_A DNAD-like replication protein; GI 24377835, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Streptococcus mutans UA159}
Probab=80.92 E-value=2.5 Score=29.76 Aligned_cols=72 Identities=17% Similarity=0.207 Sum_probs=48.3
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhh--cccccccccHHHHHHHHHHcCCCCHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHM--KAATMCEFSKQEFIGGLQSLGIDSLDKFR 131 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l--~a~~~g~~tr~ef~~g~~~l~~~si~~lk 131 (250)
+.|-..|+++-......+..+-+..++++.|++++ ++...+-+.+ +..++..+ +.-+..|++.|+.|+++.+
T Consensus 4 ~~l~~~~e~~~gr~ls~~e~~~i~~w~~~~~~~~e-lI~~A~~~a~~~~~~s~~Yi--~~Il~~W~~~gi~T~e~a~ 77 (78)
T 2zc2_A 4 NALVEDFERELGRMLSPFELEDLQKTVSDDKTDPD-LVRSALREAVFNGKTNWNYI--QAILRNWRHEGISTLRQVE 77 (78)
T ss_dssp CHHHHHHHHHHTSCCCHHHHHHHHHHHTTTCCCHH-HHHHHHHHHHHHTCCCHHHH--HHHHHHHHHTTCCSHHHHC
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHhCCCHH-HHHHHHHHHHHcCCCCHHHH--HHHHHHHHHcCCCCHHHHh
Confidence 34555666665422345677888899999998875 5555555544 33333333 6788899999999998764
No 250
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=80.73 E-value=9.3 Score=29.81 Aligned_cols=121 Identities=8% Similarity=0.029 Sum_probs=74.7
Q ss_pred CCCCcchHHHHH-HHHhh-h-----C-CCHHHHHHHHHhCCCCchhh-hhhhhccCC--------------------CCC
Q 025620 2 HKLSRSNRDKLQ-QFVSI-T-----G-ASEKAALQALKASDWHLEGA-FDVFYSQPQ--------------------SKS 52 (250)
Q Consensus 2 ~~l~~~q~~~i~-~F~~i-T-----~-~s~~~A~~~L~~~~w~le~A-~~~f~~~~~--------------------~~~ 52 (250)
+.||.+|.+.++ -|..+ + | .+...-...|++-+.++..+ +..+..... ...
T Consensus 1 sqLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~~d~~~~g~i~f~eFl~~~~~~~~~~~ 80 (159)
T 3i5g_C 1 SQLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGEKAYKLEEILPIYEEMSSKDT 80 (159)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTCCSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred CCCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHcccccCCCcccHHHHHHHHHHhhcccc
Confidence 357777766665 35443 1 2 24566777788777765432 333332211 011
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcc--cccccccHHHHHHHHHHc
Q 025620 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKA--ATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 53 ~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a--~~~g~~tr~ef~~g~~~l 122 (250)
......|.+.|..|=.++...|+.+-+.+.+..+|....+-.+=.|.-.+.. ..=|.|+-++|++-|..-
T Consensus 81 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~~ 152 (159)
T 3i5g_C 81 GTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAG 152 (159)
T ss_dssp TCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHCC
Confidence 2345678888888865555689999999999999987765544333333333 345889999999877653
No 251
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=80.51 E-value=5.3 Score=32.97 Aligned_cols=66 Identities=15% Similarity=0.089 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc------------CCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL------------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL------------gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...+..+|..|-.++.+.|+.+-+.+++..+ |....+-.+-.+...+....=|.||.+||++.++.
T Consensus 137 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~ 214 (229)
T 3dd4_A 137 QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK 214 (229)
T ss_dssp HHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence 3567788888755555688888888888776 33333333444445556666788888888888774
No 252
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=79.23 E-value=5.5 Score=31.52 Aligned_cols=65 Identities=9% Similarity=0.003 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
....+.++|+.|- +....|..+=+...+..+|++.+.+. -|--......-|.|+.+||+..|...
T Consensus 49 e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~gl~~~el~--~I~~~~D~d~dG~Ld~~EF~~am~li 113 (139)
T 2jq6_A 49 DKPTYDEIFYTLS-PVNGKITGANAKKEMVKSKLPNTVLG--KIWKLADVDKDGLLDDEEFALANHLI 113 (139)
T ss_dssp THHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTTCCHHHHH--HHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhCcCHHHHH--HHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4588999999997 55568999999999999997654332 22233456677999999999988663
No 253
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=79.05 E-value=6.2 Score=30.86 Aligned_cols=81 Identities=12% Similarity=0.150 Sum_probs=53.5
Q ss_pred HHHHHHHHHhc--CCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCC----CCHHHH
Q 025620 57 RHLEELYNRYK--DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI----DSLDKF 130 (250)
Q Consensus 57 ~~l~~lF~~Y~--~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~----~si~~l 130 (250)
..|.+.|+.|- ++....|+.+=+...+..||++|..-.+--+... ....-|.|+-++|+..+..... .+.+.|
T Consensus 9 ~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~~-d~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~l 87 (159)
T 3i5g_C 9 EEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGT-KKMGEKAYKLEEILPIYEEMSSKDTGTAADEF 87 (159)
T ss_dssp HHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTCC-SSTTSCEECHHHHHHHHHHHTTCCTTCCHHHH
T ss_pred HHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHcc-cccCCCcccHHHHHHHHHHhhcccccchHHHH
Confidence 45777788774 2334589999999999999999977654332211 1222479999999998876542 345556
Q ss_pred HHHHHHHH
Q 025620 131 RERISFMR 138 (250)
Q Consensus 131 k~~l~~L~ 138 (250)
+.....+.
T Consensus 88 ~~aF~~fD 95 (159)
T 3i5g_C 88 MEAFKTFD 95 (159)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 55544443
No 254
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=78.86 E-value=4 Score=31.49 Aligned_cols=66 Identities=8% Similarity=0.149 Sum_probs=53.5
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhh-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~ed-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
..|..+|.+|..+ .+.|+.+=+.+++.. ||-.+.+-.+=-+-..+-...=|.|+-+||+.-|..+-
T Consensus 15 e~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~ 85 (121)
T 4drw_A 15 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT 85 (121)
T ss_dssp HHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 5567788888754 468999999999876 88877777777777788888889999999999888753
No 255
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=78.78 E-value=22 Score=32.43 Aligned_cols=66 Identities=9% Similarity=-0.028 Sum_probs=46.3
Q ss_pred HHHHHHHHHhcCCCCCccchHHH----HHHHhhcCCCCC-------chHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 57 RHLEELYNRYKDPYLDMILVDGI----TLLCNDLQVDPQ-------DIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~----~~~~edLgv~~e-------d~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
..+.++|+.+-.++...|+.+-+ .+++..+|.+|. +..+--+...+....-|.|+.+||+..+...
T Consensus 335 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~ 411 (484)
T 3nyv_A 335 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDR 411 (484)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhc
Confidence 57888899886555568888877 667777898887 4455555556667778999999999887653
No 256
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=78.49 E-value=13 Score=30.38 Aligned_cols=64 Identities=13% Similarity=0.028 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHH-HHhhcCCCCCchHHHHHHHhh---------cccccccccHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITL-LCNDLQVDPQDIVMLVVSWHM---------KAATMCEFSKQEFIGGL 119 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~-~~edLgv~~ed~~~LvLa~~l---------~a~~~g~~tr~ef~~g~ 119 (250)
...|.++|..|-.+....|+.+-+.+ +...+|+++....+-.+...+ ....-|.|+.+||+..+
T Consensus 50 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~ 123 (226)
T 2lvv_A 50 KSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFR 123 (226)
T ss_dssp HHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHH
Confidence 46788899988544456899999998 778889877443322222222 45667899999999853
No 257
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=77.90 E-value=6.1 Score=31.50 Aligned_cols=77 Identities=12% Similarity=0.082 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhc---ccccccccHHHHHHHHHHcCC-CCHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMK---AATMCEFSKQEFIGGLQSLGI-DSLDKFR 131 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~---a~~~g~~tr~ef~~g~~~l~~-~si~~lk 131 (250)
...+.+.|+.+- ....|+.+-+.. -||++|....+--+...+. ...-|.|+.++|+..|..+.- +..++|+
T Consensus 27 ~~~~~~~F~~~D--~dG~I~~~el~~---~lg~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~l~ 101 (179)
T 3a8r_A 27 WAAVEKRFNQLQ--VDGVLLRSRFGK---CIGMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLR 101 (179)
T ss_dssp HHHHHHHHHHHC--BTTBEEGGGHHH---HHTCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHHHHHH
T ss_pred HHHHHHHHhccC--CCCCCcHHHHHH---HHCCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHHHHHH
Confidence 567888888885 234788876665 3688876544333333332 234567899999888876532 3344555
Q ss_pred HHHHHH
Q 025620 132 ERISFM 137 (250)
Q Consensus 132 ~~l~~L 137 (250)
.....+
T Consensus 102 ~~F~~~ 107 (179)
T 3a8r_A 102 TFFDMV 107 (179)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 544443
No 258
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=77.88 E-value=6.8 Score=31.18 Aligned_cols=70 Identities=7% Similarity=-0.021 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCC
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI 124 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~ 124 (250)
+...+..+|..+-.+....|+.+-...++..+.-......+..+-..+-...-|.||++||...+..+|+
T Consensus 44 ~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~ 113 (188)
T 1s6i_A 44 MESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGL 113 (188)
T ss_dssp CHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC
T ss_pred CHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC
Confidence 4578889999886555568988888888766543222122233333445667799999999999988874
No 259
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=77.41 E-value=3.3 Score=33.87 Aligned_cols=63 Identities=8% Similarity=0.040 Sum_probs=43.2
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcC---CCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQ---VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLg---v~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
..+..+|..|-.++...|+.+-+.+++..+| ++++++.. +.-.+....=|.|+.+||+..|..
T Consensus 130 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~--l~~~~D~d~dG~I~~~EF~~~~~~ 195 (219)
T 3cs1_A 130 FELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAA--LFKELDKNGTGSVTFDEFAAWASA 195 (219)
T ss_dssp HHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHH--HHHHHCTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHH--HHHHhCCCCCCcEeHHHHHHHHHH
Confidence 4577788877544456888888888888775 45555433 233445556688999999888765
No 260
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=77.19 E-value=17 Score=25.68 Aligned_cols=79 Identities=9% Similarity=-0.006 Sum_probs=55.2
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHh-hcccccccccHHHHHHHHHHc---CC-CCHH
Q 025620 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWH-MKAATMCEFSKQEFIGGLQSL---GI-DSLD 128 (250)
Q Consensus 54 ~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~-l~a~~~g~~tr~ef~~g~~~l---~~-~si~ 128 (250)
.+...|.++|..+- ....|+.+....++ ...++...-+.-++. +-...-|.|+++++...++.+ |. -|.+
T Consensus 7 ~t~~e~~~~~~~~d--~~g~i~~~ef~~~~---~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~ 81 (110)
T 1pva_A 7 LKADDIKKALDAVK--AEGSFNHKKFFALV---GLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDA 81 (110)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHH---TCTTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHH
T ss_pred CCHHHHHHHHHhcC--CCCcCcHHHHHHHH---ccCcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHH
Confidence 46788999999886 33468887766665 455555555555554 456677999999999999998 54 3555
Q ss_pred HHHHHHHHH
Q 025620 129 KFRERISFM 137 (250)
Q Consensus 129 ~lk~~l~~L 137 (250)
.++..+..+
T Consensus 82 ~~~~~~~~~ 90 (110)
T 1pva_A 82 ETKAFLKAA 90 (110)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 666555544
No 261
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=76.66 E-value=5.5 Score=31.68 Aligned_cols=65 Identities=12% Similarity=0.089 Sum_probs=49.7
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...|.+.|..|=.++...|+.+-+.+.+..+|..+.+-.+=-|.-.+. ..=|.|+-+||++-|++
T Consensus 83 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k 147 (176)
T 2lhi_A 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 147 (176)
T ss_dssp HHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence 467889999885445569999999999999998876654433333444 55699999999998865
No 262
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=75.47 E-value=11 Score=29.97 Aligned_cols=64 Identities=5% Similarity=-0.085 Sum_probs=32.8
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHH-hhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLC-NDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~-edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~ 120 (250)
..+.++|..+-.++.+.|+.+-...++ .-..-.+..-.+-.+-..+....-|.|+++||...++
T Consensus 74 ~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~ 138 (207)
T 2ehb_A 74 LFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVV 138 (207)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 455666666654444456666555433 3232222222233333344555567777777777664
No 263
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=75.36 E-value=9.7 Score=28.27 Aligned_cols=64 Identities=11% Similarity=0.050 Sum_probs=46.2
Q ss_pred HHHHHHHHHhc-CCCC-CccchHHHHHHHhh-cCCC---CCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 57 RHLEELYNRYK-DPYL-DMILVDGITLLCND-LQVD---PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 57 ~~l~~lF~~Y~-~~~~-d~i~~dG~~~~~ed-Lgv~---~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
..|.++|..|- .++. +.|+.+-+..++.. ||-. ++.+.- +...+....-|.|+-+||+..+...
T Consensus 22 ~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~--li~~~D~d~dG~Idf~EF~~~~~~~ 91 (106)
T 2h2k_A 22 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDE--KMKSLDVNQDSELKFNEYWRLIGEL 91 (106)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHH--HHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHH--HHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 67889999996 3333 58999999999975 7732 233333 3344566677999999999988764
No 264
>1aip_C EF-TS, elongation factor TS; nucleotide exchange, GTP-binding, complex of two elongation factors; 3.00A {Thermus thermophilus} SCOP: a.5.2.2 d.43.1.1
Probab=75.36 E-value=3.1 Score=35.26 Aligned_cols=40 Identities=20% Similarity=0.355 Sum_probs=35.4
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 025620 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~ 47 (250)
+.++|.+.++.||+.--.+...|..+++|++.|++--=..
T Consensus 3 ~a~~VKeLRe~TGagmmdCKkAL~e~~GD~ekAie~LR~k 42 (196)
T 1aip_C 3 QMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRER 42 (196)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHHc
Confidence 3568999999999999999999999999999999865543
No 265
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=75.35 E-value=11 Score=30.84 Aligned_cols=64 Identities=6% Similarity=-0.045 Sum_probs=30.7
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHh-hcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCN-DLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~e-dLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~ 120 (250)
..+..+|..+-.++.+.|+.+-...++. -..-.+..-.+-.+-..+-...-|.|+++||...++
T Consensus 85 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~ 149 (226)
T 2zfd_A 85 LFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVV 149 (226)
T ss_dssp HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Confidence 3455566665444344566665554442 222222222222233334455556666666666664
No 266
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=75.31 E-value=6.8 Score=36.97 Aligned_cols=86 Identities=10% Similarity=0.026 Sum_probs=38.0
Q ss_pred CHHHHHHHHHhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHH-
Q 025620 22 SEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW- 100 (250)
Q Consensus 22 s~~~A~~~L~~~~w~le~A~~~f~~~~~~~~~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~- 100 (250)
+..+-..+|+..+.++ +...+..+|..+-.+....|+.+-...++..+--.......+.-++
T Consensus 330 s~~EL~~~L~~lg~~~-----------------s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk 392 (450)
T 3sg6_A 330 TTKELGTVMRSLGQNP-----------------TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR 392 (450)
T ss_dssp CHHHHHHHHHHTTCCC-----------------CHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------CHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCC-----------------CHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccchhhHHHHHHH
Confidence 4566666666654322 3344555555543333335555555555544333332222222222
Q ss_pred hhcccccccccHHHHHHHHHHcCC
Q 025620 101 HMKAATMCEFSKQEFIGGLQSLGI 124 (250)
Q Consensus 101 ~l~a~~~g~~tr~ef~~g~~~l~~ 124 (250)
.+-...-|.||++||...++.+|.
T Consensus 393 ~fD~D~dG~Is~eELr~~L~~lG~ 416 (450)
T 3sg6_A 393 VFDKDGNGYISAAELRHVMTNLGE 416 (450)
T ss_dssp HHCTTCSSEECHHHHHHHHHHHTC
T ss_pred HhCCCCCCeEeHHHHHHHHHHhCC
Confidence 223344455555555555555553
No 267
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=75.17 E-value=12 Score=29.61 Aligned_cols=64 Identities=9% Similarity=-0.021 Sum_probs=35.1
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHH-HhhcccccccccHHHHHHHHHHc
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVS-WHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa-~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
..+..+|..+-.++.+.|+.+-...++....- .....+.-+ ..+-...-|.||++||...+...
T Consensus 87 ~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~--~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 151 (191)
T 3k21_A 87 YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQ--LSKKLIYCAFRVFDVDNDGEITTAELAHILYNG 151 (191)
T ss_dssp TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGG--CCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhh--ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 55666676665444456777666666543331 222222222 23445556777777777777663
No 268
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=74.78 E-value=4.1 Score=41.18 Aligned_cols=65 Identities=8% Similarity=0.053 Sum_probs=49.0
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
..+..+|..|-.++...|+.+-+.+.+..+|..+.+-.+-.|...+. ..-|.|+.+||+..+..+
T Consensus 607 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~ 671 (900)
T 1qxp_A 607 RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL 671 (900)
T ss_dssp HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH
Confidence 56777888876555568999999999999998776655555555555 667899999999888764
No 269
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=74.29 E-value=7.9 Score=29.95 Aligned_cols=51 Identities=10% Similarity=0.114 Sum_probs=28.5
Q ss_pred CccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 72 d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
..|+.+-+.+++..+|....+-.+-.+...+-...=|.|+.+||+..+..+
T Consensus 117 G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~~~ 167 (186)
T 2hps_A 117 GYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDF 167 (186)
T ss_dssp SEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 366666666666666644433333333334444455667777776666554
No 270
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=73.79 E-value=7.3 Score=36.82 Aligned_cols=86 Identities=10% Similarity=0.038 Sum_probs=36.2
Q ss_pred CHHHHHHHHHhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHH-
Q 025620 22 SEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW- 100 (250)
Q Consensus 22 s~~~A~~~L~~~~w~le~A~~~f~~~~~~~~~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~- 100 (250)
+..+-...|++.+.++ +...|.++|..+-.+....|+.+-...++...--..+...-|.-|+
T Consensus 320 S~eELk~aLrsLG~~~-----------------TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk 382 (440)
T 3u0k_A 320 TTKELGTVMRSLGQNP-----------------TEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFR 382 (440)
T ss_dssp CHHHHHHHHHHTTCCC-----------------CHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCC-----------------CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHH
Confidence 4556666666655432 2344555555543333334554444444432211111111222222
Q ss_pred hhcccccccccHHHHHHHHHHcCC
Q 025620 101 HMKAATMCEFSKQEFIGGLQSLGI 124 (250)
Q Consensus 101 ~l~a~~~g~~tr~ef~~g~~~l~~ 124 (250)
.+-...-|.||++|+...++.+|.
T Consensus 383 ~fDkDgdG~IS~eELr~vL~~lGe 406 (440)
T 3u0k_A 383 VFDKDGNGYISAAELRHVMTNLGE 406 (440)
T ss_dssp HHCTTCSSEECHHHHHHHHHHHTC
T ss_pred HHCCCCcCcCCHHHHHHHHHHhCC
Confidence 223334455555555555555543
No 271
>2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=72.77 E-value=2.5 Score=29.23 Aligned_cols=39 Identities=23% Similarity=0.274 Sum_probs=33.5
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCC-CchhhhhhhhccC
Q 025620 9 RDKLQQFVSITGASEKAALQALKASDW-HLEGAFDVFYSQP 48 (250)
Q Consensus 9 ~~~i~~F~~iT~~s~~~A~~~L~~~~w-~le~A~~~f~~~~ 48 (250)
.+.|++.+++ |-++..|++.|..+++ +++.|++-.|++.
T Consensus 10 e~~v~~L~~M-GF~~~~a~~AL~~t~n~~~e~A~~wL~~h~ 49 (64)
T 2crn_A 10 PSLLEPLLAM-GFPVHTALKALAATGRKTAEEALAWLHDHC 49 (64)
T ss_dssp CSSHHHHHHT-SCCHHHHHHHHHHHTSCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence 3568899995 9999999999999865 9999999988764
No 272
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=72.15 E-value=17 Score=28.09 Aligned_cols=72 Identities=14% Similarity=0.132 Sum_probs=51.3
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCC--CCHHHHHH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI--DSLDKFRE 132 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~--~si~~lk~ 132 (250)
..|.+.|+.|=.++...|+.+-+...+..||.+|.+..+-.+- ...-|.|+-++|+..+..... ++.+.|+.
T Consensus 16 ~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~----~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~~ 89 (153)
T 3i5g_B 16 QELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAML----KECPGQLNFTAFLTLFGEKVSGTDPEDALRN 89 (153)
T ss_dssp HHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHH----HTSSSCCCSHHHHHTTTTTTTTCCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHH----HhccCCccHHHHHHHHHhhhcccccHHHHHH
Confidence 6777889988655556999999999999999999776543322 123467999999998876432 33444443
No 273
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=71.84 E-value=3.2 Score=32.43 Aligned_cols=32 Identities=9% Similarity=-0.032 Sum_probs=17.5
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCC
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQV 88 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv 88 (250)
..+..+|..|-.++...|+.+-+.+++..+|.
T Consensus 98 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~ 129 (183)
T 1dgu_A 98 IKSHYAFRIFDFDDDGTLNREDLSRLVNCLTG 129 (183)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhc
Confidence 35555666554333445666666666665544
No 274
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=71.74 E-value=23 Score=28.74 Aligned_cols=49 Identities=12% Similarity=0.173 Sum_probs=36.8
Q ss_pred CccchHHHHHHHhhcCCCCCchHHHHHHHhhccccccc-ccHHHHHHHHHHcCC
Q 025620 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCE-FSKQEFIGGLQSLGI 124 (250)
Q Consensus 72 d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~-~tr~ef~~g~~~l~~ 124 (250)
..|+.+-+.. +..||.+|..-.+ ...+....-|. |+.+||+..+..+..
T Consensus 74 G~I~~~E~~~-l~~lg~~~~~~~l---f~~~D~d~dG~~I~f~EF~~~~~~~~~ 123 (214)
T 2l4h_A 74 AQVPFEQILS-LPELKANPFKERI---CRVFSTSPAKDSLSFEDFLDLLSVFSD 123 (214)
T ss_dssp SEECHHHHTT-CHHHHTSTTHHHH---HHHHCCSSSCCSEEHHHHHHHHHHTSS
T ss_pred CcCCHHHHHH-hhccCCChHHHHH---HHHhCcCCCCCEecHHHHHHHHHHHcC
Confidence 5788888888 8889998864433 33345566788 999999999987653
No 275
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=71.59 E-value=18 Score=33.30 Aligned_cols=66 Identities=9% Similarity=0.018 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc--------CCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL--------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL--------gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...+.++|+.+-.++...|+.+-+...+..+ |+.+....+-.+...+....-|.|+.+||+..+..
T Consensus 354 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 427 (504)
T 3q5i_A 354 RKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMD 427 (504)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 4678889999865556689999998888888 66776666666777777788899999999988764
No 276
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1
Probab=71.53 E-value=4.4 Score=35.19 Aligned_cols=42 Identities=17% Similarity=0.329 Sum_probs=36.3
Q ss_pred CCCcchHHHHHHHHhhhC-------CCHHHHHHHHHhCCCCchhhhhhh
Q 025620 3 KLSRSNRDKLQQFVSITG-------ASEKAALQALKASDWHLEGAFDVF 44 (250)
Q Consensus 3 ~l~~~q~~~i~~F~~iT~-------~s~~~A~~~L~~~~w~le~A~~~f 44 (250)
.|++.|++.|++|.+..+ .++....+||.+.+||++.|...+
T Consensus 25 ~l~~~q~~~l~~lr~~l~~~~~~~~~dd~~LlRFLrarkfdv~~A~~~l 73 (296)
T 1aua_A 25 NLDSAQEKALAELRKLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEMF 73 (296)
T ss_dssp TCCTTHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHcCCCHHHHHHHH
Confidence 578889999999988653 568899999999999999998776
No 277
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=71.42 E-value=18 Score=33.18 Aligned_cols=67 Identities=15% Similarity=0.120 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhcCCCCCccchHHH----HHHHhhcCCCCC----------chHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGI----TLLCNDLQVDPQ----------DIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~----~~~~edLgv~~e----------d~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...+.++|+.|-.++...|+.+-+ .+++..+|+++. ...+-.+...+....-|.|+.+||+..+..
T Consensus 330 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~ 409 (486)
T 3mwu_A 330 TKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAID 409 (486)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSC
T ss_pred HHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHh
Confidence 477888999986655568998877 566777899887 344555556677778899999999988765
Q ss_pred c
Q 025620 122 L 122 (250)
Q Consensus 122 l 122 (250)
.
T Consensus 410 ~ 410 (486)
T 3mwu_A 410 R 410 (486)
T ss_dssp T
T ss_pred h
Confidence 4
No 278
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=71.25 E-value=24 Score=24.80 Aligned_cols=80 Identities=5% Similarity=-0.069 Sum_probs=54.9
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHc---CC-CCH
Q 025620 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSL---GI-DSL 127 (250)
Q Consensus 53 ~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l---~~-~si 127 (250)
..+...+.++|..+- ....|+.+....++. ..++...-+.-++ .+-...-|.|+++||...++.+ |. -+.
T Consensus 6 ~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~---~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~ 80 (109)
T 1bu3_A 6 ILADADVAAALKACE--AADSFNYKAFFAKVG---LTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTD 80 (109)
T ss_dssp SSCHHHHHHHHHHTC--STTCCCHHHHHHHHT---GGGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCH
T ss_pred cCCHHHHHHHHHHhC--CCCcCcHHHHHHHHH---cChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCH
Confidence 456789999999886 345788887776653 3344454454444 4456667999999999999998 54 355
Q ss_pred HHHHHHHHHH
Q 025620 128 DKFRERISFM 137 (250)
Q Consensus 128 ~~lk~~l~~L 137 (250)
+.++..+..+
T Consensus 81 ~~~~~~~~~~ 90 (109)
T 1bu3_A 81 AETKAFLKAG 90 (109)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5666555544
No 279
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=71.06 E-value=24 Score=24.78 Aligned_cols=80 Identities=10% Similarity=0.103 Sum_probs=54.1
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHc---CCC-CH
Q 025620 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSL---GID-SL 127 (250)
Q Consensus 53 ~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l---~~~-si 127 (250)
..+...|.++|..+-. .+.|+.+-...++ +...+...-+.-++ .+-...-|.|+++|+...++.+ |.. +-
T Consensus 5 ~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~---~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~ 79 (109)
T 5pal_A 5 VLKADDINKAISAFKD--PGTFDYKRFFHLV---GLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLND 79 (109)
T ss_dssp TSCHHHHHHHHHHTCS--TTCCCHHHHHHHH---TCTTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCH
T ss_pred cCCHHHHHHHHHHhCC--CCcCcHHHHHHHH---hhccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCH
Confidence 3567889999998854 4467776655554 44455554454444 4456677999999999999998 654 45
Q ss_pred HHHHHHHHHH
Q 025620 128 DKFRERISFM 137 (250)
Q Consensus 128 ~~lk~~l~~L 137 (250)
+.++..+..+
T Consensus 80 ~~~~~~~~~~ 89 (109)
T 5pal_A 80 TETKALLAAG 89 (109)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5566555554
No 280
>1xb2_B EF-TS, elongation factor TS, mitochondrial, EF-TSMT; protein-protein complex, translation; HET: MSE; 2.20A {Bos taurus} SCOP: a.5.2.2 d.43.1.1 d.43.1.1
Probab=71.02 E-value=3.8 Score=36.68 Aligned_cols=39 Identities=21% Similarity=0.125 Sum_probs=35.7
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhc
Q 025620 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS 46 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~ 46 (250)
..++|.+.++.||+.--.+.+.|..++||++.|++--=.
T Consensus 4 ta~~VKeLRe~TGagmmdCKKAL~e~~GD~ekAie~LR~ 42 (291)
T 1xb2_B 4 SKELLMKLRRKTGYSFINCKKALETCGGDLKQAESWLHK 42 (291)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 457899999999999999999999999999999987665
No 281
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=70.14 E-value=25 Score=24.65 Aligned_cols=80 Identities=5% Similarity=-0.010 Sum_probs=54.0
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHc---CCC-CH
Q 025620 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSL---GID-SL 127 (250)
Q Consensus 53 ~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l---~~~-si 127 (250)
..+...|.++|..+- ....|+.+-...++. ..+....-+.-++ .+-...-|.|+++|+...++.+ |.. +.
T Consensus 6 ~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~---~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~ 80 (109)
T 3fs7_A 6 ILSAKDIESALSSCQ--AADSFNYKSFFSTVG---LSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTS 80 (109)
T ss_dssp TSCHHHHHHHHHHTC--STTCCCHHHHHHHHT---CTTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCH
T ss_pred cCCHHHHHHHHHhcC--CCCcCcHHHHHHHHh---cCCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCH
Confidence 346789999999985 345788776665554 4444554444444 4456677999999999999998 443 45
Q ss_pred HHHHHHHHHH
Q 025620 128 DKFRERISFM 137 (250)
Q Consensus 128 ~~lk~~l~~L 137 (250)
+.++..+..+
T Consensus 81 ~~~~~~~~~~ 90 (109)
T 3fs7_A 81 AETKAFLAAG 90 (109)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5565555544
No 282
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=70.05 E-value=9.1 Score=31.41 Aligned_cols=68 Identities=7% Similarity=0.047 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhc----CCCCCchHHHH----HHHhhcccccccccHHHHHHHHHH
Q 025620 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDPQDIVMLV----VSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 54 ~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL----gv~~ed~~~Lv----La~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
.....+..+|..|-.++...|+.+-+.+++..+ |..+.+..+-. +...+....-|.|+.+||+..+..
T Consensus 101 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 176 (272)
T 2be4_A 101 DNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILAL 176 (272)
T ss_dssp CCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCC
T ss_pred ccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhh
Confidence 456789999999965556689999999999888 87776544321 444556677799999999988764
No 283
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=69.86 E-value=8 Score=30.94 Aligned_cols=63 Identities=8% Similarity=0.068 Sum_probs=44.5
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
..|.++|..|-.+....|+.+-+..+. .+|++|..-. +...+....-|.|+.+||+..+....
T Consensus 29 ~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~~~~---l~~~~d~~~~g~i~~~EF~~~~~~~~ 91 (208)
T 2ct9_A 29 TRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPLGDR---IINAFFSEGEDQVNFRGFMRTLAHFR 91 (208)
T ss_dssp HHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTTHHH---HHHTTSCTTCSCEEHHHHHHHHHTTS
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCcHHH---HHHHHcCCCCCcCcHHHHHHHHHhhc
Confidence 457778888754445578877776644 7888886433 23345666679999999999998764
No 284
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=69.74 E-value=5.4 Score=30.69 Aligned_cols=64 Identities=6% Similarity=0.021 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcC----------CCCCchHHHH--HHHhhcccccccccHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQ----------VDPQDIVMLV--VSWHMKAATMCEFSKQEFIGGL 119 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLg----------v~~ed~~~Lv--La~~l~a~~~g~~tr~ef~~g~ 119 (250)
...+..+|..|-.+....|+.+-+.+.+..++ ++++.+.-++ +...+....=|.|+.+||+..|
T Consensus 67 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 67 QELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp HHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred HHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 46788999999544456899999999888874 3333333222 1134455667899999998654
No 285
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=68.76 E-value=27 Score=24.45 Aligned_cols=79 Identities=5% Similarity=-0.080 Sum_probs=54.0
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHc---CC-CCHH
Q 025620 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSL---GI-DSLD 128 (250)
Q Consensus 54 ~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l---~~-~si~ 128 (250)
++...+.++|..+- ....|+.+-...++. ..+....-+.-++ .+-...-|.|++++|...++.+ |. -+.+
T Consensus 6 ~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~---~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~ 80 (108)
T 2pvb_A 6 LKDADVAAALAACS--AADSFKHKEFFAKVG---LASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDA 80 (108)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHHT---GGGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHH
T ss_pred CCHHHHHHHHHHhC--CCCcCcHHHHHHHHh---CChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHH
Confidence 56789999999876 334688887777764 3334444444444 4456667999999999999998 54 3555
Q ss_pred HHHHHHHHH
Q 025620 129 KFRERISFM 137 (250)
Q Consensus 129 ~lk~~l~~L 137 (250)
.++..+..+
T Consensus 81 ~~~~~~~~~ 89 (108)
T 2pvb_A 81 ETKAFLADG 89 (108)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 666555544
No 286
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*
Probab=68.64 E-value=4.8 Score=35.87 Aligned_cols=43 Identities=23% Similarity=0.442 Sum_probs=37.4
Q ss_pred CCCcchHHHHHHHHhhhC-------CCHHHHHHHHHhCCCCchhhhhhhh
Q 025620 3 KLSRSNRDKLQQFVSITG-------ASEKAALQALKASDWHLEGAFDVFY 45 (250)
Q Consensus 3 ~l~~~q~~~i~~F~~iT~-------~s~~~A~~~L~~~~w~le~A~~~f~ 45 (250)
.|++.|+++|++|.+... +++..-.+||.+.+||++.|...+=
T Consensus 34 ~lt~~q~~~l~~lR~~l~~~~~~~~~dD~~LLRFLRArkfdv~kA~~mL~ 83 (320)
T 3q8g_A 34 NLTKEQEEALLQFRSILLEKNYKERLDDSTLLRFLRARKFDINASVEMFV 83 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 588899999999998853 5678899999999999999998764
No 287
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=68.37 E-value=24 Score=27.63 Aligned_cols=67 Identities=7% Similarity=-0.019 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHhcCC---CCCccchHHHHHHHhhcCCCC-Cc---hHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 55 DTRHLEELYNRYKDP---YLDMILVDGITLLCNDLQVDP-QD---IVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~---~~d~i~~dG~~~~~edLgv~~-ed---~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
....|.++|..|..- ....|+...+.++|+|.||=. -. ..+=++--++ +..-..|+-++|+..+..+
T Consensus 20 ~~~~L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~~l 93 (125)
T 1pul_A 20 DDADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TGPKKKATFDETKKVLAFV 93 (125)
T ss_dssp CHHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cCCcceecHHHHHHHHHHH
Confidence 457899999999842 336799999999999999854 21 2222333345 5555689999999998874
No 288
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=68.05 E-value=7.4 Score=38.76 Aligned_cols=66 Identities=9% Similarity=0.078 Sum_probs=52.5
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
..+.++|..|-.++.+.|+.+-+...+..+|..+.+..+=.+.-.+....-|.|+.+||+..|...
T Consensus 725 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 790 (863)
T 1sjj_A 725 NEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRE 790 (863)
T ss_dssp HHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHH
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 456777877754445689999999999999999887766666666677778999999999998775
No 289
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=67.28 E-value=25 Score=24.67 Aligned_cols=80 Identities=5% Similarity=-0.042 Sum_probs=54.2
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHcC---C-CCH
Q 025620 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLG---I-DSL 127 (250)
Q Consensus 53 ~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~---~-~si 127 (250)
..+...+.++|..+- ..+.|+.+-...++. ..+....-+.-++ .+-...-|.|+++|+...++.++ . -+.
T Consensus 5 ~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~---~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~ 79 (108)
T 1rro_A 5 ILSAEDIAAALQECQ--DPDTFEPQKFFQTSG---LSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTE 79 (108)
T ss_dssp TSCHHHHHHHHHHTC--STTCCCHHHHHHHHS---GGGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCH
T ss_pred cCCHHHHHHHHHHcc--CCCCcCHHHHHHHHh---cCcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCH
Confidence 456789999999885 345788888777763 3344444444444 44566779999999999999983 3 355
Q ss_pred HHHHHHHHHH
Q 025620 128 DKFRERISFM 137 (250)
Q Consensus 128 ~~lk~~l~~L 137 (250)
+.++..+..+
T Consensus 80 ~~~~~~~~~~ 89 (108)
T 1rro_A 80 SETKSLMDAA 89 (108)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5555555443
No 290
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*
Probab=67.12 E-value=2.6 Score=35.72 Aligned_cols=43 Identities=19% Similarity=0.234 Sum_probs=30.9
Q ss_pred CCCcchHHHHHHHHhhhC----------CCHHHHHHHHHhCCCCchhhhhhhh
Q 025620 3 KLSRSNRDKLQQFVSITG----------ASEKAALQALKASDWHLEGAFDVFY 45 (250)
Q Consensus 3 ~l~~~q~~~i~~F~~iT~----------~s~~~A~~~L~~~~w~le~A~~~f~ 45 (250)
.||+.+++.|.+|.+..+ .++....+||.+.+||++.|...+=
T Consensus 3 ~ls~~~~~~l~~lr~~l~~~~~~~~~~~~dd~~LlRFLra~k~dv~~A~~~l~ 55 (262)
T 1r5l_A 3 HMSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLK 55 (262)
T ss_dssp ------CTTHHHHHHHHHHHTCCCSSSCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHhCCcccCCCCCCHHHHHHHHHhCCCCHHHHHHHHH
Confidence 478888888888876643 4688999999999999999988653
No 291
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=66.72 E-value=30 Score=24.19 Aligned_cols=79 Identities=5% Similarity=-0.015 Sum_probs=53.2
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHc---CC-CCHH
Q 025620 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSL---GI-DSLD 128 (250)
Q Consensus 54 ~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l---~~-~si~ 128 (250)
.+...+.++|..+- ....|+.+-...++. ..++....+.-++ .+-...-|.|++++|...++.+ |. -+.+
T Consensus 6 ~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~---~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~ 80 (109)
T 1rwy_A 6 LSAEDIKKAIGAFT--AADSFDHKKFFQMVG---LKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAK 80 (109)
T ss_dssp SCHHHHHHHHHTTC--STTCCCHHHHHHHHT---GGGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHH
T ss_pred CCHHHHHHHHHHcC--CCCcEeHHHHHHHHh---cCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHH
Confidence 46788999999875 344788877776653 3344444444444 3456667999999999999998 44 3555
Q ss_pred HHHHHHHHH
Q 025620 129 KFRERISFM 137 (250)
Q Consensus 129 ~lk~~l~~L 137 (250)
.++..+..+
T Consensus 81 ~~~~~~~~~ 89 (109)
T 1rwy_A 81 ETKTLMAAG 89 (109)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555443
No 292
>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11
Probab=66.69 E-value=18 Score=29.16 Aligned_cols=70 Identities=23% Similarity=0.226 Sum_probs=50.4
Q ss_pred cCCHHHHHHHHHHhcCC---C--CCccchHHHHHHHhhcCCCC----CchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 53 LTDTRHLEELYNRYKDP---Y--LDMILVDGITLLCNDLQVDP----QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 53 ~~~~~~l~~lF~~Y~~~---~--~d~i~~dG~~~~~edLgv~~----ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
+.+...|.++|..|..- . ...|+..-..++|.|.||=. ....+=++--++++..-..|+-++|+..+..+
T Consensus 11 ~~d~~~L~~~F~~F~~fG~~~~~~~~M~~~~f~Kl~kD~~lidgk~~T~tdvDiiF~KvK~k~~rkI~f~qF~~aL~~l 89 (151)
T 1wlm_A 11 STDIAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEEL 89 (151)
T ss_dssp CCSCCSHHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHhcccCCcccccCCHHHHHHHHHHCCCCcCCCCChhhcceehheeccCccceecHHHHHHHHHHH
Confidence 45567899999999963 1 24799999999999999954 22233333445666656689999999988774
No 293
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=66.60 E-value=3.4 Score=38.10 Aligned_cols=68 Identities=9% Similarity=-0.080 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
...+..+|..+-.++...|+.+-....+.........-.+-.+-..+-...-|.||++||...+..+|
T Consensus 380 ~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g 447 (486)
T 3mwu_A 380 EDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQAD 447 (486)
T ss_dssp HHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCCHHHHHHHHHHHCSSCSSSBCSSCC--------
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcC
Confidence 45555555555433334555555555444333322222222222233444445566666555555554
No 294
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=64.83 E-value=6.4 Score=32.10 Aligned_cols=66 Identities=14% Similarity=0.081 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhh-cCCCCCc--hHHHHHHH------hh-cccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCND-LQVDPQD--IVMLVVSW------HM-KAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~ed-Lgv~~ed--~~~LvLa~------~l-~a~~~g~~tr~ef~~g~~~ 121 (250)
...+.++|..|-.+....|+.+-+...+.. ||++|.. +..++-.. .+ ....-|.|+.+||+..+..
T Consensus 47 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~~~~~ 122 (219)
T 3cs1_A 47 KQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLM 122 (219)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHHHHHH
Confidence 467888999886555668999999988887 8987743 33222111 11 1255689999999987654
No 295
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=63.92 E-value=28 Score=27.74 Aligned_cols=96 Identities=21% Similarity=0.270 Sum_probs=51.2
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCch--HHHHHHHhh--------------------cccc--cccccH
Q 025620 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDI--VMLVVSWHM--------------------KAAT--MCEFSK 112 (250)
Q Consensus 57 ~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~--~~LvLa~~l--------------------~a~~--~g~~tr 112 (250)
+.++++-++=-++.-...+..+++.+|+-++-+++.+ ++-.|.-++ +|.. --+|..
T Consensus 10 ~~~~~~IekATs~~l~~~dw~~ileicD~I~~~~~~pk~a~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~~fh~eias 89 (149)
T 3g2s_A 10 ETLEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGK 89 (149)
T ss_dssp CCHHHHHHHHSCTTCSSCCHHHHHHHHHHGGGSSSHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCHHHHHHHTS
T ss_pred CcHHHHHHHHcCCCCCCcCHHHHHHHHHHHHCCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 4455555555444333345667777777776666444 222232332 2322 247888
Q ss_pred HHHHHHHHHcCC------CCHHHHHHHHH----HHHHHccchHHHHHHHH
Q 025620 113 QEFIGGLQSLGI------DSLDKFRERIS----FMRAELKDEQKFREIYN 152 (250)
Q Consensus 113 ~ef~~g~~~l~~------~si~~lk~~l~----~L~~~l~~~~~Fk~~Y~ 152 (250)
.+|++.+.++-- .+-...|.++- .+...+.+...+...|+
T Consensus 90 ~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f~~~p~i~~~Y~ 139 (149)
T 3g2s_A 90 FRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVGLPEEVKIAEAYQ 139 (149)
T ss_dssp HHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 889988876532 23345555554 44444555555555554
No 296
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=63.88 E-value=6.1 Score=29.83 Aligned_cols=81 Identities=6% Similarity=-0.066 Sum_probs=35.7
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHcCC--CCHHHHHHHH
Q 025620 58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGI--DSLDKFRERI 134 (250)
Q Consensus 58 ~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~~--~si~~lk~~l 134 (250)
.+.++|..+-.++.+.|+.+-...++...--......-+.-++ .+-...-|.|+++|+...++.+|. -+.+.++..+
T Consensus 4 ~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~ 83 (135)
T 3h4s_E 4 TEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMV 83 (135)
T ss_dssp ---------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHH
T ss_pred hHHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHH
Confidence 3456666665444456777766666554222222223333343 345667899999999999999995 4666666666
Q ss_pred HHHH
Q 025620 135 SFMR 138 (250)
Q Consensus 135 ~~L~ 138 (250)
..+.
T Consensus 84 ~~~D 87 (135)
T 3h4s_E 84 REGD 87 (135)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 5543
No 297
>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=63.29 E-value=23 Score=29.59 Aligned_cols=70 Identities=21% Similarity=0.217 Sum_probs=49.9
Q ss_pred cCCHHHHHHHHHHhcCC---C--CCccchHHHHHHHhhcCCCC----CchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 53 LTDTRHLEELYNRYKDP---Y--LDMILVDGITLLCNDLQVDP----QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 53 ~~~~~~l~~lF~~Y~~~---~--~d~i~~dG~~~~~edLgv~~----ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
++....|.++|..|..- . ...|+..-..++|.|.||=. ....+=++--++++..--.|+-++|+..+..+
T Consensus 4 ~~~~~~L~~~F~~F~~fG~~~~~~~eMd~~~F~KlcKD~~liDgk~~T~tdvDIiF~KvK~k~~rkI~feqF~~aL~~l 82 (184)
T 2jrf_A 4 STDIAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKALEEL 82 (184)
T ss_dssp SSSCSHHHHHHHHHHSSSCTTSTTSEEEHHHHHHHHHHTTCCCSSSSCHHHHHHHHHHHCCSCCSEEEHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhcCCCCCccccCcHHHHHHHHHHcCCccCCCCChhhcchhhheeccCcceeecHHHHHHHHHHH
Confidence 45667899999999962 1 24799999999999999853 22233333345665555679999999887763
No 298
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=62.81 E-value=13 Score=36.85 Aligned_cols=64 Identities=6% Similarity=0.056 Sum_probs=30.2
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCC
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI 124 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~ 124 (250)
+...+..+|..+-.+....|+.+-...++..+ ..+..+-..+-...-|.|+++||...++.+|.
T Consensus 573 s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~ 636 (714)
T 3bow_A 573 SIETCKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGF 636 (714)
T ss_dssp CHHHHHHHHHHHCCSSCSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTE
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCC
Confidence 34555555555543333455555555555443 11112222333444555666666655555553
No 299
>2juj_A E3 ubiquitin-protein ligase CBL; alpha helix, UBA domain, calcium, cytoplasm, metal- binding, phosphorylation, proto-oncogene, SH2 domain; NMR {Homo sapiens}
Probab=62.81 E-value=10 Score=25.65 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=32.9
Q ss_pred chHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhc
Q 025620 7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS 46 (250)
Q Consensus 7 ~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~ 46 (250)
.-++.|.+.|++ |-|...|++.|..++.|++.|.|--.+
T Consensus 6 p~e~~Ia~L~sm-Gfsr~da~~AL~ia~Ndv~~AtNiLlE 44 (56)
T 2juj_A 6 QLSSEIENLMSQ-GYSYQDIQKALVIAQNNIEMAKNILRE 44 (56)
T ss_dssp HHHHHHHHHHTT-TCCHHHHHHHHHHTTTCSHHHHHHHHH
T ss_pred CChHHHHHHHHc-CCCHHHHHHHHHHhcccHHHHHHHHHH
Confidence 345678888886 999999999999999999999886543
No 300
>2lva_A Ubiquitin carboxyl-terminal hydrolase 28; UIM, ubiquitin interacting motif, UBA domain, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=66.40 E-value=1.6 Score=34.43 Aligned_cols=41 Identities=27% Similarity=0.274 Sum_probs=35.6
Q ss_pred hHHHHHHHHhhhCCC-HHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 8 NRDKLQQFVSITGAS-EKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 8 q~~~i~~F~~iT~~s-~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
+.-.+.|..+|||.. ...-.+.|++++.||+.||.-+-+++
T Consensus 18 ~Q~lLNQLrEITGIqD~~~L~~ALkAsnGdl~qAV~~LT~~~ 59 (129)
T 2lva_A 18 GQMLLNQLREITGIQDPSFLHEALKASNGDITQAVSLLTDER 59 (129)
Confidence 445789999999998 67788999999999999998887664
No 301
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=61.45 E-value=20 Score=31.39 Aligned_cols=65 Identities=17% Similarity=0.081 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhh-------cCCC----CCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCND-------LQVD----PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~ed-------Lgv~----~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
..++.=+|.-|. +....|+.+-+..++.+ +|-. .+.+.-.|-.-.-++..-|.||.+||++|++.
T Consensus 167 eeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d~dg~It~~EFl~~~~~ 242 (261)
T 1eg3_A 167 EDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRL 242 (261)
T ss_dssp HHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTTTCSCBCHHHHHHHHHT
T ss_pred HHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCCCCCcCCHHHHHHHHHh
Confidence 478888999999 44557888888887755 3421 12333333222222235689999999999876
No 302
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=60.56 E-value=9.2 Score=29.57 Aligned_cols=37 Identities=14% Similarity=0.222 Sum_probs=31.5
Q ss_pred HHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 025620 10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (250)
Q Consensus 10 ~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~ 47 (250)
+.|.+|+++ |-++..|+..|..++.|++.|++-.|..
T Consensus 78 ~~v~~L~eM-GF~~~~a~~AL~~~~nd~erAlewL~~~ 114 (118)
T 4ae4_A 78 QLMSKFKEM-GFELKDIKEVLLLHNNDQDNALEDLMAR 114 (118)
T ss_dssp HHHHHHHHT-TCCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 347777775 7899999999999999999999987754
No 303
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.73 E-value=8.7 Score=26.89 Aligned_cols=41 Identities=10% Similarity=0.145 Sum_probs=35.0
Q ss_pred chHHHHHHHHhhh-CCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 025620 7 SNRDKLQQFVSIT-GASEKAALQALKASDWHLEGAFDVFYSQ 47 (250)
Q Consensus 7 ~q~~~i~~F~~iT-~~s~~~A~~~L~~~~w~le~A~~~f~~~ 47 (250)
...+.+.++.++. +.+..+.+..|++++.|++.||+...+-
T Consensus 17 ~~~~~v~~L~~MFP~lD~~vI~~vL~a~~G~vd~aId~LL~m 58 (67)
T 2dhy_A 17 EFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQM 58 (67)
T ss_dssp CSHHHHHHHHHHCSSSCHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 3567888888876 6679999999999999999999998853
No 304
>1jw2_A Hemolysin expression modulating protein HHA; structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Escherichia coli} SCOP: a.23.5.1 PDB: 2jvp_A 2k5s_A
Probab=59.32 E-value=22 Score=25.28 Aligned_cols=40 Identities=20% Similarity=0.424 Sum_probs=31.7
Q ss_pred ccHHHHHHHHHHcCCCCHHHHHHHHHHHHHHccchHHHHHHHH
Q 025620 110 FSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYN 152 (250)
Q Consensus 110 ~tr~ef~~g~~~l~~~si~~lk~~l~~L~~~l~~~~~Fk~~Y~ 152 (250)
.|+.+|+--+++ |.|++.|-+.+..++..|.++ +...+|.
T Consensus 6 Mtk~d~L~k~Rr--c~s~eTLEkv~e~~~y~Lt~~-el~~f~~ 45 (72)
T 1jw2_A 6 LTKTDYLMRLRR--CQTIDTLERVIEKNKYELSDN-ELAVFYS 45 (72)
T ss_dssp CCHHHHHHHHHT--SSCHHHHHHHHHHHHHHSCHH-HHHHHHH
T ss_pred ccHHHHHHHHHh--cCcHHHHHHHHHHhhccCCHH-HHHHHHH
Confidence 399999976665 999999999999999998665 4444443
No 305
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=58.33 E-value=24 Score=32.38 Aligned_cols=67 Identities=6% Similarity=-0.112 Sum_probs=39.0
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
....+.++|..+-.++.+.|+.+-...++...+-....-.+-.+-..+-...-|.||++||...+..
T Consensus 388 ~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~ 454 (494)
T 3lij_A 388 IESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL 454 (494)
T ss_dssp HHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 4567777777775544557777777766655432222222222333445566678888888777665
No 306
>2ou3_A Tellurite resistance protein of COG3793; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE I3A; 1.85A {Nostoc punctiforme} SCOP: a.287.1.1
Probab=57.15 E-value=26 Score=27.66 Aligned_cols=90 Identities=16% Similarity=0.023 Sum_probs=53.3
Q ss_pred CCCcchHHHHHHHHhhhCCCHHHHHHHHH-hCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHH-hcCCCCCccchHHHH
Q 025620 3 KLSRSNRDKLQQFVSITGASEKAALQALK-ASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNR-YKDPYLDMILVDGIT 80 (250)
Q Consensus 3 ~l~~~q~~~i~~F~~iT~~s~~~A~~~L~-~~~w~le~A~~~f~~~~~~~~~~~~~~l~~lF~~-Y~~~~~d~i~~dG~~ 80 (250)
..++++.+.|++++.-.|.++.......+ ...-++...+..+=.. ......-+..++.- |+|..-+.....=+.
T Consensus 45 ~v~~~E~~~i~~~~~~~~l~~~~~~~l~~~~~~~~l~~~~~~i~~~----~~~~~~~l~~l~~vA~ADG~~~~~E~~~L~ 120 (161)
T 2ou3_A 45 VISPEEKDWALGFCASWGVADWVIEDLKTYEADEALEEVIARSPQV----SMAQRDILLSAIWVSAADGELHEKEKAKIR 120 (161)
T ss_dssp CCCHHHHHHHHHHHHHTTCCHHHHHHHHHCCCCSCHHHHHTTCTTG----GGCHHHHHHHHHHHHHTTSSCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCHHHHHHHhhccCCCCHHHHHHHHHHH----hccHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 35677888999999888888877666665 3333333222111110 01112244555543 455434455556678
Q ss_pred HHHhhcCCCCCchHHH
Q 025620 81 LLCNDLQVDPQDIVML 96 (250)
Q Consensus 81 ~~~edLgv~~ed~~~L 96 (250)
++|+-|||++.+...+
T Consensus 121 ~iA~~Lgls~~~~~~l 136 (161)
T 2ou3_A 121 KMATILGIKEEIVDQL 136 (161)
T ss_dssp HHHHHHTCCHHHHHHH
T ss_pred HHHHHcCCCHHHHHHH
Confidence 9999999999887655
No 307
>2oo9_A E3 ubiquitin-protein ligase CBL; alpha-helical domain, homodimer; 2.10A {Homo sapiens}
Probab=56.09 E-value=15 Score=23.86 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=30.3
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhh
Q 025620 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45 (250)
Q Consensus 9 ~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~ 45 (250)
.+.|+..++. |-+.+.|++.|..++-|++.|.+---
T Consensus 5 e~~I~~L~s~-Gf~~~~~~rAL~ia~Nnie~A~nIL~ 40 (46)
T 2oo9_A 5 SSEIENLMSQ-GYSYQDIQKALVIAQNNIEMAKNILR 40 (46)
T ss_dssp HHHHHHHHHT-TBCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHhhccHHHHHHHHH
Confidence 4567777775 89999999999999999999987543
No 308
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=55.91 E-value=26 Score=32.24 Aligned_cols=82 Identities=10% Similarity=0.041 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCCCHHHHHHH
Q 025620 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRER 133 (250)
Q Consensus 54 ~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~ 133 (250)
.....+.++|..+-.++.+.|+.+-...++...+.....-.+-.+-..+-...-|.||++||...+...++ +-+.++..
T Consensus 396 ~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~-~~~~~~~~ 474 (504)
T 3q5i_A 396 NVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSI-SEKTWNDV 474 (504)
T ss_dssp CHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTCSCC-CHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCCC-CHHHHHHH
Confidence 45577778888776555557777777766655432222122222233445566678888888877766443 33444444
Q ss_pred HHH
Q 025620 134 ISF 136 (250)
Q Consensus 134 l~~ 136 (250)
+..
T Consensus 475 ~~~ 477 (504)
T 3q5i_A 475 LGE 477 (504)
T ss_dssp HHT
T ss_pred HHH
Confidence 443
No 309
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=54.60 E-value=34 Score=31.08 Aligned_cols=82 Identities=6% Similarity=-0.033 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCCCHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERIS 135 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l~ 135 (250)
...+.++|..+-.++.+.|+.+-....+...+.....-.+-.+-..+-...=|.||++||...+...+ -+.+.++..+.
T Consensus 381 ~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~-~~~~~~~~~~~ 459 (484)
T 3nyv_A 381 EHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSD-VDSETWKSVLS 459 (484)
T ss_dssp HHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTT-CCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcC-CCHHHHHHHHH
Confidence 68889999988665556899888888777664322222333333445666779999999999988733 35566666666
Q ss_pred HHH
Q 025620 136 FMR 138 (250)
Q Consensus 136 ~L~ 138 (250)
.++
T Consensus 460 ~~D 462 (484)
T 3nyv_A 460 EVD 462 (484)
T ss_dssp HHC
T ss_pred Hhc
Confidence 554
No 310
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=53.73 E-value=11 Score=34.69 Aligned_cols=39 Identities=21% Similarity=0.259 Sum_probs=35.4
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 025620 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (250)
Q Consensus 8 q~~~i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~ 47 (250)
..+.|.+.+++ |-++..|++.|.+++||.+.|++-.|+.
T Consensus 168 ~~~~i~~l~~M-Gf~~~~~~~AL~a~~nn~~~A~e~L~~g 206 (368)
T 1oqy_A 168 YETMLTEIMSM-GYERERVVAALRASYNNPHRAVEYLLTG 206 (368)
T ss_dssp HHHHHHHHHTT-TCCSHHHHHHHHHSCSSTTHHHHTTTTS
T ss_pred hHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhC
Confidence 56779999887 8999999999999999999999999865
No 311
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=52.86 E-value=5.9 Score=40.02 Aligned_cols=66 Identities=11% Similarity=-0.028 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCC--------CCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV--------DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv--------~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
...|.++|.++- +....|+.+-+.+.+..+|. .+..-.+-.|.-.+....-|.|+.+||+..|..+
T Consensus 533 ~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~ 606 (900)
T 1qxp_A 533 DDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRI 606 (900)
T ss_dssp --------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 357788999886 44458988888888888876 5555555556666777778999999999998774
No 312
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=51.75 E-value=15 Score=25.85 Aligned_cols=68 Identities=3% Similarity=-0.085 Sum_probs=37.5
Q ss_pred CCchHHHHHHHh-hcccccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHHccchHHHHHHHHHHHHhh
Q 025620 90 PQDIVMLVVSWH-MKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA 158 (250)
Q Consensus 90 ~ed~~~LvLa~~-l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l~~L~~~l~~~~~Fk~~Y~f~F~~~ 158 (250)
+++..-+.-++. +-...-|.|+.+++...++.+|.+ .+.++..+...+..=...-.|.+|......+.
T Consensus 5 ~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~-~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~ 73 (92)
T 1fi6_A 5 DEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLP-ILELSHIWELSDFDKDGALTLDEFCAAFHLVV 73 (92)
T ss_dssp HHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSC-HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCC-HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Confidence 334444444443 345557999999999999999854 55555555443211100112555555444433
No 313
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=51.15 E-value=16 Score=33.18 Aligned_cols=43 Identities=19% Similarity=0.280 Sum_probs=36.1
Q ss_pred CCCcchHHHHHHHHhhh--------CCCHHHHHHHHHhCCCCchhhhhhhh
Q 025620 3 KLSRSNRDKLQQFVSIT--------GASEKAALQALKASDWHLEGAFDVFY 45 (250)
Q Consensus 3 ~l~~~q~~~i~~F~~iT--------~~s~~~A~~~L~~~~w~le~A~~~f~ 45 (250)
.|+..|+++|++|.+.. ..++..-.+||.+.+||++.|...+=
T Consensus 7 ~l~~~q~~~l~~lr~~l~~~~~~l~~~dD~~LlRFLrarkfdv~~A~~~l~ 57 (403)
T 1olm_A 7 DLSPRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLR 57 (403)
T ss_dssp BCCHHHHHHHHHHHHHHGGGGGGSSCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhccCCCCCChhHHHHHHHhcCCCHHHHHHHHH
Confidence 68889999999998753 35678899999999999999988763
No 314
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=50.59 E-value=22 Score=26.91 Aligned_cols=51 Identities=8% Similarity=0.008 Sum_probs=31.1
Q ss_pred CCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHc
Q 025620 69 PYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (250)
Q Consensus 69 ~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l 122 (250)
|+--....+-|.+-++.+||+|+|.++=-++.++-+ .+ ++-++||+-|-+.
T Consensus 21 ~~~~~Vsae~L~eEfdefGi~~~d~VldKc~ELC~~--y~-lda~e~VeeWmAF 71 (101)
T 2keb_A 21 PGSMSASAQQLAEELQIFGLDCEEALIEKLVELCVQ--YG-QNEEGMVGELIAF 71 (101)
T ss_dssp ---CCCCHHHHHHHHHHHTCBCCHHHHHHHHHHHHH--HT-CCHHHHHHHHHHH
T ss_pred CchhhccHHHHHHHHHHcCCCCCHHHHHHHHHHHHH--cC-CCHHHHHHHHHHH
Confidence 333456777788888888888888544333333322 22 3677888887776
No 315
>3k6g_A Telomeric repeat-binding factor 2-interacting Pro; helix, chromosomal protein, nucleus, phosphoprotein, telomer cycle, DNA-binding, protein binding; 1.95A {Homo sapiens}
Probab=49.07 E-value=59 Score=24.69 Aligned_cols=58 Identities=19% Similarity=0.214 Sum_probs=39.8
Q ss_pred hHHHHHHHHhhhCCC-HHHHHHHHHhCCCCchhhhhhhhccCCCC---C-----------cCCHHHHHHHHHHhc
Q 025620 8 NRDKLQQFVSITGAS-EKAALQALKASDWHLEGAFDVFYSQPQSK---S-----------LTDTRHLEELYNRYK 67 (250)
Q Consensus 8 q~~~i~~F~~iT~~s-~~~A~~~L~~~~w~le~A~~~f~~~~~~~---~-----------~~~~~~l~~lF~~Y~ 67 (250)
..+.|+++|+=++.+ ..+-+.+||.++ ++++|.. |..++++. | +.++...++|-+||-
T Consensus 13 ~~~~i~~lMeef~~DL~sVTqAlLK~SG-el~at~~-fL~~~~r~dg~PiWsr~DD~~Lqk~D~~~R~qL~~KfG 85 (111)
T 3k6g_A 13 AIKIIRQLMEKFNLDLSTVTQAFLKNSG-ELEATSA-FLASGQRADGYPIWSRQDDIDLQKDDEDTREALVKKFG 85 (111)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHTTT-CHHHHHH-HHHHSSCTTSCCCCCHHHHHHHTCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHccc-cHHHHHH-HHhCCCcCCCCcceeeccHHHHhcCCHHHHHHHHHHHh
Confidence 456799999999999 566777777777 9988764 55555431 1 344566666666664
No 316
>1ku1_A ARF guanine-nucleotide exchange factor 2; SEC7 domain, guanine nucleotide exchange factor (GEF), ARF small GTP-binding proteins; 1.93A {Saccharomyces cerevisiae} SCOP: a.118.3.1 PDB: 1re0_B*
Probab=49.05 E-value=53 Score=28.12 Aligned_cols=39 Identities=8% Similarity=0.150 Sum_probs=29.7
Q ss_pred chHHHHHHHHhhhCCCHHHHHHHHHhCCCC---chhhhhhhh
Q 025620 7 SNRDKLQQFVSITGASEKAALQALKASDWH---LEGAFDVFY 45 (250)
Q Consensus 7 ~q~~~i~~F~~iT~~s~~~A~~~L~~~~w~---le~A~~~f~ 45 (250)
.++..+.+.+..-|.+++.+++||..+++= -...|..|+
T Consensus 22 ~~K~~~~~~~~~FN~~PkkGI~~L~~~g~l~~~~~~~iA~fL 63 (230)
T 1ku1_A 22 DRKTEFIECTNAFNEKPKKGIPMLIEKGFIASDSDKDIAEFL 63 (230)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHTTSSSCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHCCCcCCCCHHHHHHHH
Confidence 356667888888888999999999998862 335677775
No 317
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=47.93 E-value=13 Score=26.83 Aligned_cols=67 Identities=10% Similarity=-0.006 Sum_probs=39.5
Q ss_pred hhcccccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhhcCCccccH
Q 025620 101 HMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLAL 168 (250)
Q Consensus 101 ~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l~~L~~~l~~~~~Fk~~Y~f~F~~~~~~~qk~l~~ 168 (250)
.+-...-|.||.+|+...++.+|+ +-+.++..+......=...-.|.+|.............+.++.
T Consensus 19 ~~D~d~dG~Is~~el~~~l~~~~l-~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~~~~~~g~~~~~ 85 (99)
T 1qjt_A 19 QVEAGNTGRVLALDAAAFLKKSGL-PDLILGKIWDLADTDGKGVLSKQEFFVALRLVACAQNGLEVSL 85 (99)
T ss_dssp HHCCTTSSCCCSHHHHHHHHTSSS-CHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHHHHTTTCCSSG
T ss_pred HHCCCCCCcCCHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHcCCCCCh
Confidence 445566799999999999999986 3455554444332110001136777776655554444444443
No 318
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=47.90 E-value=4.2 Score=30.79 Aligned_cols=30 Identities=10% Similarity=0.072 Sum_probs=23.4
Q ss_pred ccccHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 025620 108 CEFSKQEFIGGLQSLGIDSLDKFRERISFMR 138 (250)
Q Consensus 108 g~~tr~ef~~g~~~l~~~si~~lk~~l~~L~ 138 (250)
|.|+.+++...++.+|. |-+.++..+..++
T Consensus 61 G~I~~~El~~~l~~lG~-t~~ei~~~~~~~D 90 (123)
T 2kld_A 61 GKLNFDELRQDLKGKGH-TDAEIEAIFTKYD 90 (123)
T ss_dssp TCEEHHHHHHHTTTCCS-SHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHhCC-CHHHHHHHHHHHc
Confidence 88999999999988888 7777776665543
No 319
>2h5n_A Hypothetical protein PG_1108; SAD, MCSG,PSI, structural genomics, PR structure initiative; 2.01A {Porphyromonas gingivalis} SCOP: a.287.1.2
Probab=47.12 E-value=76 Score=24.28 Aligned_cols=90 Identities=14% Similarity=0.002 Sum_probs=55.6
Q ss_pred CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCC-CCchhhhhhhhccCCCCCcCCHHHHHHHHHH-hcCCCCCccchHHHH
Q 025620 3 KLSRSNRDKLQQFVSITGASEKAALQALKASD-WHLEGAFDVFYSQPQSKSLTDTRHLEELYNR-YKDPYLDMILVDGIT 80 (250)
Q Consensus 3 ~l~~~q~~~i~~F~~iT~~s~~~A~~~L~~~~-w~le~A~~~f~~~~~~~~~~~~~~l~~lF~~-Y~~~~~d~i~~dG~~ 80 (250)
.+++++.+.+++++.-.|.++..+...++... -....++..+ ..-+ ...-..-|..+|.= |+|+.-+.-...=+.
T Consensus 34 ~v~~~E~~~l~~~l~~lgl~~~e~~~l~~~~~~~~~~~~~~~~-~~~~--~e~r~~ll~~L~~IA~ADG~i~~~E~~lLr 110 (133)
T 2h5n_A 34 KIKPAEIAVMTREFMRFGILQDQVDLLLKASDSIEASQAVALI-ARMD--EERKKYVASYLGVIMASDGDIDDNELALWT 110 (133)
T ss_dssp CCCHHHHHHHHHHHGGGTCCHHHHHHHHHHHTTSCHHHHHHHH-HTSC--HHHHHHHHHHHHHHSCBTTBCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHhccHHHHHHHH-HcCC--HHHHHHHHHHHHHHhhcCCCCCHHHHHHHH
Confidence 46778888899998888999988888888775 3455555533 1110 00011334444442 233322334444567
Q ss_pred HHHhhcCCCCCchHH
Q 025620 81 LLCNDLQVDPQDIVM 95 (250)
Q Consensus 81 ~~~edLgv~~ed~~~ 95 (250)
+.|+-||+++.|..-
T Consensus 111 ~ia~~Lgls~~d~~~ 125 (133)
T 2h5n_A 111 LISTLCGLPTMTVME 125 (133)
T ss_dssp HHHHHHTCCCCCHHH
T ss_pred HHHHHcCCCHHHHHH
Confidence 899999999999843
No 320
>2jqt_A H-NS/STPA-binding protein 2; CNU, YDGT, replication origin associated, ORIC, protein binding; NMR {Escherichia coli}
Probab=46.97 E-value=16 Score=25.96 Aligned_cols=40 Identities=20% Similarity=0.443 Sum_probs=31.6
Q ss_pred cHHHHHHHHHHcCCCCHHHHHHHHHHHHHHccchHHHHHHHH
Q 025620 111 SKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYN 152 (250)
Q Consensus 111 tr~ef~~g~~~l~~~si~~lk~~l~~L~~~l~~~~~Fk~~Y~ 152 (250)
|+.+|+--+++ |.|++.|-+.+..++..|.++.++..+|.
T Consensus 2 tk~d~L~kfRk--c~s~eTLEkv~e~~~y~L~~~~e~~~f~~ 41 (71)
T 2jqt_A 2 TVQDYLLKFRK--ISSLESLEKLYDHLNYTLTDDQELINMYR 41 (71)
T ss_dssp CCCCTHHHHHH--CCCSHHHHHHHHHHHHHTCSHHHHHHHHH
T ss_pred CHHHHHHHHHh--cCcHHHHHHHHHHhhccCCCHHHHHHHHH
Confidence 56677766665 99999999999999999988766666665
No 321
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=44.12 E-value=28 Score=23.66 Aligned_cols=48 Identities=15% Similarity=0.170 Sum_probs=30.7
Q ss_pred CCchHHHHHHH-hhcccccccccHHHHHHHHHHcCCC-CHHHHHHHHHHH
Q 025620 90 PQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGID-SLDKFRERISFM 137 (250)
Q Consensus 90 ~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~~~-si~~lk~~l~~L 137 (250)
++...-+.-++ .+-...-|.|+++++...++.+|.. +...++..+..+
T Consensus 16 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~ 65 (90)
T 1avs_A 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEV 65 (90)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 33343333333 3345566999999999999999875 455555555444
No 322
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=44.01 E-value=12 Score=29.90 Aligned_cols=69 Identities=9% Similarity=0.099 Sum_probs=47.1
Q ss_pred ccchHHHHHHHhhcCCCCCchHH-------HHHHHhhcccccc----cccHHHHHHHHHHcCCCCHHHHHHHHHHHHHHc
Q 025620 73 MILVDGITLLCNDLQVDPQDIVM-------LVVSWHMKAATMC----EFSKQEFIGGLQSLGIDSLDKFRERISFMRAEL 141 (250)
Q Consensus 73 ~i~~dG~~~~~edLgv~~ed~~~-------LvLa~~l~a~~~g----~~tr~ef~~g~~~l~~~si~~lk~~l~~L~~~l 141 (250)
+=.++++.+.|+.||++|+++.+ +..|...|....+ .-+.++....-...-++|+..|...|..+...+
T Consensus 165 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~~~ 244 (247)
T 3dv9_A 165 KPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWETLQSAL 244 (247)
T ss_dssp TTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHHHHHHHHh
Confidence 34567899999999999987544 6777778866543 334444433223344678999988888876654
No 323
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=43.64 E-value=23 Score=32.58 Aligned_cols=66 Identities=8% Similarity=-0.024 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCC--------CCchHHHHHHHhhcccccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVD--------PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~--------~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~ 121 (250)
...+.++|+.+-.++...|+.+-+...+..+|.+ +....+--+...+....-|.|+.+||+..+..
T Consensus 345 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~ 418 (494)
T 3lij_A 345 TKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMD 418 (494)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 3678888988865555689999998888888653 22344444555566677899999999988754
No 324
>1ufz_A Hypothetical protein BAB28515; HBS1-like domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, translatio; NMR {Mus musculus} SCOP: a.5.9.1
Probab=42.92 E-value=14 Score=27.01 Aligned_cols=37 Identities=16% Similarity=0.326 Sum_probs=32.6
Q ss_pred HHHHHhhhCC--CHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 12 LQQFVSITGA--SEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 12 i~~F~~iT~~--s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
+.+-.++.|= ++.+.+..-=++++|++.|++.+++.+
T Consensus 38 Ld~iR~VlGdsV~e~~Lv~ailk~dfD~ekALd~vL~~~ 76 (83)
T 1ufz_A 38 LDHMREVLGDAVPDDILTEAILKHKFDVQKALSVVLEQD 76 (83)
T ss_dssp HHHHHHHTTTTSCHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHcccCCHHHHHHHHHHhcCCHHHHHHHHHhcc
Confidence 6788999995 588889988999999999999999764
No 325
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=42.42 E-value=27 Score=27.66 Aligned_cols=62 Identities=11% Similarity=0.050 Sum_probs=39.8
Q ss_pred cchHHHHHHHhhcCCCCCchHH-------HHHHHhhccccccc----ccHHHHHHHHHHcCCCCHHHHHHHHH
Q 025620 74 ILVDGITLLCNDLQVDPQDIVM-------LVVSWHMKAATMCE----FSKQEFIGGLQSLGIDSLDKFRERIS 135 (250)
Q Consensus 74 i~~dG~~~~~edLgv~~ed~~~-------LvLa~~l~a~~~g~----~tr~ef~~g~~~l~~~si~~lk~~l~ 135 (250)
=.++++.+.|+.+|++|+++.+ +..|...|....+. -.+++....-...-++++.+|...|.
T Consensus 161 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l~ 233 (237)
T 4ex6_A 161 PHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAVL 233 (237)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHHH
Confidence 3568999999999999976543 66777788766543 33344333222233567777766554
No 326
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=42.01 E-value=23 Score=23.64 Aligned_cols=48 Identities=10% Similarity=0.139 Sum_probs=30.3
Q ss_pred CCchHHHHHHH-hhcccccccccHHHHHHHHHHcCCC-CHHHHHHHHHHH
Q 025620 90 PQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGID-SLDKFRERISFM 137 (250)
Q Consensus 90 ~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~~~-si~~lk~~l~~L 137 (250)
++...-+.-++ .+-...-|.|+++++...++.+|.. +...++..+..+
T Consensus 10 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~ 59 (85)
T 2ktg_A 10 AEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDY 59 (85)
T ss_dssp HHHHHHHHHHHHHTCTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 33333333333 3345556999999999999999865 455555544443
No 327
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=41.65 E-value=23 Score=24.46 Aligned_cols=35 Identities=11% Similarity=0.086 Sum_probs=25.3
Q ss_pred hcccccccccHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 025620 102 MKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFM 137 (250)
Q Consensus 102 l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l~~L 137 (250)
+-...-|.|+++||...++.+|. +...++..+..+
T Consensus 36 ~D~d~~G~I~~~El~~~l~~~g~-~~~~~~~~~~~~ 70 (91)
T 2pmy_A 36 CDANRSGRLEREEFRALCTELRV-RPADAEAVFQRL 70 (91)
T ss_dssp HCTTCSSSEEHHHHHHHHHHTTC-CHHHHHHHHHHH
T ss_pred HCCCCCCCCcHHHHHHHHHHcCc-CHHHHHHHHHHh
Confidence 34455699999999999999994 555555555444
No 328
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=40.42 E-value=22 Score=23.41 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=26.1
Q ss_pred hhcccccccccHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 025620 101 HMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFM 137 (250)
Q Consensus 101 ~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l~~L 137 (250)
.+-...-|.|++++|...++.+|.-+.+.++..+..+
T Consensus 11 ~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 47 (78)
T 1k9u_A 11 RFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEI 47 (78)
T ss_dssp HHCTTCSSEECHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHCCCCCCcCcHHHHHHHHHHhCCCCHHHHHHHHHHh
Confidence 3445667999999999999998833555555555444
No 329
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=40.21 E-value=16 Score=28.64 Aligned_cols=63 Identities=16% Similarity=0.091 Sum_probs=37.2
Q ss_pred cchHHHHHHHhhcCCCCCchH-------HHHHHHhhcccccccccHHHHHHHHHHcCCCCHHHHHHHHHH
Q 025620 74 ILVDGITLLCNDLQVDPQDIV-------MLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISF 136 (250)
Q Consensus 74 i~~dG~~~~~edLgv~~ed~~-------~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l~~ 136 (250)
-.++++.+.|+.+|++|+++. =+..|...|....+.=+-.+-+......-++|+..|...|+.
T Consensus 128 p~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~~~~~el~~~~~~ 197 (205)
T 3m9l_A 128 PHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARDCAQLRDLLSA 197 (205)
T ss_dssp TSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEECSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEeCCHHHHHHHHHh
Confidence 346789999999999987543 356677777655432111111111223446777777766543
No 330
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=39.59 E-value=48 Score=33.93 Aligned_cols=67 Identities=10% Similarity=0.056 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCC----------CchHHHHHHHhhccc----ccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDP----------QDIVMLVVSWHMKAA----TMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~----------ed~~~LvLa~~l~a~----~~g~~tr~ef~~g~~~ 121 (250)
+..|..+|..|..++.+.|+.+-+.+|+.+.+-++ ..-.+.-|....... .-|.++.++|+.-|..
T Consensus 222 R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~S 301 (885)
T 3ohm_B 222 RPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLGG 301 (885)
T ss_dssp CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhccC
Confidence 47899999999655566899999999999997442 111222333333322 3578999999999876
Q ss_pred c
Q 025620 122 L 122 (250)
Q Consensus 122 l 122 (250)
-
T Consensus 302 ~ 302 (885)
T 3ohm_B 302 E 302 (885)
T ss_dssp T
T ss_pred c
Confidence 3
No 331
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=38.53 E-value=27 Score=23.35 Aligned_cols=49 Identities=22% Similarity=0.266 Sum_probs=31.5
Q ss_pred CCCchHHHHHHH-hhcccccccccHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 025620 89 DPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFM 137 (250)
Q Consensus 89 ~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l~~L 137 (250)
+++...-+.-++ .+-...-|.|+++++...++.+|..+.+.++..+..+
T Consensus 6 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 55 (86)
T 2opo_A 6 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEI 55 (86)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHH
T ss_pred CHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCHHHHHHHHHHh
Confidence 344443333333 3455667999999999999999944555566555544
No 332
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=37.73 E-value=67 Score=32.33 Aligned_cols=66 Identities=14% Similarity=0.227 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc-C-----------CCCCchHHHHHHHhhcc--cccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL-Q-----------VDPQDIVMLVVSWHMKA--ATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL-g-----------v~~ed~~~LvLa~~l~a--~~~g~~tr~ef~~g~~~ 121 (250)
...|.++|..|-.++.+.|..+.+.+|+.++ | ++.+++.-++-.+-... ..-|.|+-+||+.-|..
T Consensus 218 r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L~S 297 (799)
T 2zkm_X 218 RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCG 297 (799)
T ss_dssp CHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhcccC
Confidence 4789999999954455689999999999998 4 34455554443332221 14589999999999875
No 333
>1k1f_A Breakpoint cluster region protein; oligomerization, coiled coil, BCR-ABL kinase, transferase; 2.20A {Homo sapiens} SCOP: a.147.1.1
Probab=36.56 E-value=73 Score=22.29 Aligned_cols=41 Identities=20% Similarity=0.416 Sum_probs=24.2
Q ss_pred HHHHHHHHc---------CCCCHHHHHHH-------HHHHHHHccchHHHHHHHHHHH
Q 025620 114 EFIGGLQSL---------GIDSLDKFRER-------ISFMRAELKDEQKFREIYNFAF 155 (250)
Q Consensus 114 ef~~g~~~l---------~~~si~~lk~~-------l~~L~~~l~~~~~Fk~~Y~f~F 155 (250)
+|+..|+.- ...|+.++-.. |..|.+++ +.+.|+-||--|-
T Consensus 6 gf~eaW~aqfp~~epp~m~l~~vgdiEqeLe~Ck~sIrrLE~ev-n~ErFrmIYLQTl 62 (72)
T 1k1f_A 6 GFAEAWKAQFPDSEPPRMELRSVGDIEQELERAKASIRRLEQEV-NQERFRMIYLQTL 62 (72)
T ss_dssp HHHHHHHHHCTTSCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcHhHHhhhhHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHH
Confidence 677777763 23455555444 44555554 3345999997663
No 334
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=35.84 E-value=47 Score=22.42 Aligned_cols=57 Identities=11% Similarity=0.086 Sum_probs=34.2
Q ss_pred hhcccccccccHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHccchHHHHHHHHHHHHh
Q 025620 101 HMKAATMCEFSKQEFIGGLQSLGID-SLDKFRERISFMRAELKDEQKFREIYNFAFAW 157 (250)
Q Consensus 101 ~l~a~~~g~~tr~ef~~g~~~l~~~-si~~lk~~l~~L~~~l~~~~~Fk~~Y~f~F~~ 157 (250)
.+-...-|.|+++++...+..+|.. +.+.++..+..+...-...-.|.+|..+.-..
T Consensus 17 ~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~ 74 (92)
T 2kn2_A 17 VFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV 74 (92)
T ss_dssp HHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHH
T ss_pred HHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence 3455667999999999999999864 55556555544331111111266555554433
No 335
>2pjp_A Selenocysteine-specific elongation factor; SELB, protein-RNA complex, elongation factor, winged- helix, bulge, translation/RNA complex; 2.30A {Escherichia coli}
Probab=35.64 E-value=26 Score=26.31 Aligned_cols=22 Identities=27% Similarity=0.276 Sum_probs=19.1
Q ss_pred HHHHHHhhhCCCHHHHHHHHHh
Q 025620 11 KLQQFVSITGASEKAALQALKA 32 (250)
Q Consensus 11 ~i~~F~~iT~~s~~~A~~~L~~ 32 (250)
.+.+|.+.+|+|.+.|+.+|+-
T Consensus 82 t~ae~Rd~lg~sRK~ai~lLE~ 103 (121)
T 2pjp_A 82 CAADFRDRLGVGRKLAIQILEY 103 (121)
T ss_dssp EHHHHHHHHTSCHHHHHHHHHH
T ss_pred cHHHHHHHHCCcHHHHHHHHHH
Confidence 3789999999999999988873
No 336
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=34.87 E-value=48 Score=23.27 Aligned_cols=47 Identities=11% Similarity=-0.029 Sum_probs=31.5
Q ss_pred CCCchHHHHHHH-hhcccccccccHHHHHHHHHHcCCCCHHHHHHHHHH
Q 025620 89 DPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISF 136 (250)
Q Consensus 89 ~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l~~ 136 (250)
++++..-+.-++ .+-...-|.|+.+|+...++.+|.. .+.++..+..
T Consensus 5 s~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~-~~~~~~i~~~ 52 (95)
T 1c07_A 5 SPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLP-STLLAHIWSL 52 (95)
T ss_dssp CSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCC-HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCC-HHHHHHHHHH
Confidence 444555454444 3455667999999999999999854 5555555544
No 337
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=34.71 E-value=1.1e+02 Score=21.16 Aligned_cols=37 Identities=16% Similarity=0.032 Sum_probs=26.8
Q ss_pred hhcccccccccHHHHHHHHHHcCCC-CHHHHHHHHHHH
Q 025620 101 HMKAATMCEFSKQEFIGGLQSLGID-SLDKFRERISFM 137 (250)
Q Consensus 101 ~l~a~~~g~~tr~ef~~g~~~l~~~-si~~lk~~l~~L 137 (250)
.+-...-|.|+++|+...++.+|.. +.+.++..+..+
T Consensus 37 ~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~ 74 (94)
T 2kz2_A 37 VEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 74 (94)
T ss_dssp HHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 3455667999999999999999864 555555555444
No 338
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=34.41 E-value=55 Score=21.85 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=28.9
Q ss_pred chHHHHHHHHhhhC-CCHHHHHHHHHhCCCCchhhhhhhhc
Q 025620 7 SNRDKLQQFVSITG-ASEKAALQALKASDWHLEGAFDVFYS 46 (250)
Q Consensus 7 ~q~~~i~~F~~iT~-~s~~~A~~~L~~~~w~le~A~~~f~~ 46 (250)
.+++.+.++.++.- .+.++-...|..++++++.||++-.+
T Consensus 11 e~~~~~~~L~~MFP~lD~evI~~Vl~a~~G~~~~~IdaLLq 51 (54)
T 1p3q_Q 11 ERKDTLNTLQNMFPDMDPSLIEDVCIAAASRIGPCVDALLS 51 (54)
T ss_dssp HHHHHHHHHHHHSTTSCHHHHHHHHHHSCC--CGGGC----
T ss_pred HHHHHHHHHHHHcccCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 35677888888764 57899999999999999999998654
No 339
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=34.34 E-value=18 Score=27.79 Aligned_cols=65 Identities=8% Similarity=0.012 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc------CCCCCchHHHHHH---------HhhcccccccccHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL------QVDPQDIVMLVVS---------WHMKAATMCEFSKQEFIGGLQ 120 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL------gv~~ed~~~LvLa---------~~l~a~~~g~~tr~ef~~g~~ 120 (250)
...+.++|..|-.++...|+.+-+...+..+ |+.|....+-.+. ..+....-|.|+.+| ..+.
T Consensus 13 ~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~E--~~~~ 90 (186)
T 2hps_A 13 LRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNAT--DSLL 90 (186)
T ss_dssp HHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHHHH--HHHH
T ss_pred HHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccHHH--HHHH
Confidence 4678889998865555689999888888766 8877655554443 344445567888888 4555
Q ss_pred Hc
Q 025620 121 SL 122 (250)
Q Consensus 121 ~l 122 (250)
.+
T Consensus 91 ~~ 92 (186)
T 2hps_A 91 KM 92 (186)
T ss_dssp HC
T ss_pred Hh
Confidence 44
No 340
>2di0_A Activating signal cointegrator 1 complex subunit 2; ASCC2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=34.26 E-value=61 Score=22.86 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=34.6
Q ss_pred hHHHHHHHHhhh-CCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 025620 8 NRDKLQQFVSIT-GASEKAALQALKASDWHLEGAFDVFYSQP 48 (250)
Q Consensus 8 q~~~i~~F~~iT-~~s~~~A~~~L~~~~w~le~A~~~f~~~~ 48 (250)
-.+.|.+-.++. ...+--..++|+.++.|.|.++++-+++.
T Consensus 13 l~s~I~qV~DLfPdLG~gfi~~~L~~y~~nvE~vin~LLE~~ 54 (71)
T 2di0_A 13 LDSLISQVKDLLPDLGEGFILACLEYYHYDPEQVINNILEER 54 (71)
T ss_dssp HHHHHHHHHHHCCSSCHHHHHHHHHHTTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcccCCHHHHHHHHHHhCCCHHHHHHHHHccC
Confidence 456677777776 45788999999999999999999999874
No 341
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=33.88 E-value=42 Score=34.04 Aligned_cols=66 Identities=14% Similarity=0.185 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCC------------CchHHHHHHHhh--c--ccccccccHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDP------------QDIVMLVVSWHM--K--AATMCEFSKQEFIGGL 119 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~------------ed~~~LvLa~~l--~--a~~~g~~tr~ef~~g~ 119 (250)
++.|..+|..|..++.+.|+. .+.+|+.++|-++ ++..-++--+-. . ...-|.++.++|+.-|
T Consensus 228 R~EI~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL 306 (816)
T 3qr0_A 228 RSEIEGIFKELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFL 306 (816)
T ss_dssp CTHHHHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHh
Confidence 468999999998766678999 9999999998443 222222222211 1 1245789999999998
Q ss_pred HHc
Q 025620 120 QSL 122 (250)
Q Consensus 120 ~~l 122 (250)
..-
T Consensus 307 ~S~ 309 (816)
T 3qr0_A 307 MCE 309 (816)
T ss_dssp HSG
T ss_pred hcc
Confidence 764
No 342
>2lh0_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; NMR {Saccharomyces cerevisiae}
Probab=33.85 E-value=36 Score=24.02 Aligned_cols=26 Identities=19% Similarity=0.491 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHccchHH-HHHHHHH
Q 025620 128 DKFRERISFMRAELKDEQK-FREIYNF 153 (250)
Q Consensus 128 ~~lk~~l~~L~~~l~~~~~-Fk~~Y~f 153 (250)
+.|+.+|..+......... |.++|.|
T Consensus 14 ~~Lq~kV~aIV~~~PsSl~VF~~Ly~y 40 (70)
T 2lh0_A 14 ESLSRKIGTVVRVLPSSLEIFEELYKY 40 (70)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccHHHHHHHHHHH
Confidence 5688888888776655445 9999999
No 343
>1b43_A Protein (FEN-1); nuclease, DNA repair, DNA replication, transferase; 2.00A {Pyrococcus furiosus} SCOP: a.60.7.1 c.120.1.2 PDB: 1mc8_A
Probab=33.26 E-value=1e+02 Score=27.26 Aligned_cols=68 Identities=16% Similarity=0.167 Sum_probs=44.4
Q ss_pred hhCCCHHHHHHHHHhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCC-----CccchHHHHHHH-hhcCCCCC
Q 025620 18 ITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYL-----DMILVDGITLLC-NDLQVDPQ 91 (250)
Q Consensus 18 iT~~s~~~A~~~L~~~~w~le~A~~~f~~~~~~~~~~~~~~l~~lF~~Y~~~~~-----d~i~~dG~~~~~-edLgv~~e 91 (250)
+-|+-+++|.++|++++ +++..++. +.. ....++.++|-.....+. ...+.+++..|+ +.+|.+.+
T Consensus 242 v~GiG~ktA~kli~~~g-sle~il~~----~~~---~~~~~~~~~~~~~~v~d~~~~~~~~pd~~~l~~~~~~~~~f~~~ 313 (340)
T 1b43_A 242 IKGIGLKKALEIVRHSK-DPLAKFQK----QSD---VDLYAIKEFFLNPPVTDNYNLVWRDPDEEGILKFLCDEHDFSEE 313 (340)
T ss_dssp STTCCHHHHHHHHHTCS-SGGGGTGG----GCS---SCHHHHHHHHHSCCCCCCCCCCCCCCCHHHHHHHHTTTTCCCHH
T ss_pred CCCccHHHHHHHHHHcC-CHHHHHcC----CCC---ccHHHHHHHHhCCCCCCcccCCCCCCCHHHHHHHHHHhcCCCHH
Confidence 34455799999999997 77776654 322 123456666655432221 146788999887 99999886
Q ss_pred ch
Q 025620 92 DI 93 (250)
Q Consensus 92 d~ 93 (250)
-+
T Consensus 314 rv 315 (340)
T 1b43_A 314 RV 315 (340)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 344
>1qlm_A Methenyltetrahydromethanopterin cyclohydrolase; methanogenesis, biological methanogenesis; 2.0A {Methanopyrus kandleri} SCOP: d.147.1.1
Probab=32.66 E-value=2.2 Score=38.52 Aligned_cols=64 Identities=14% Similarity=0.329 Sum_probs=39.5
Q ss_pred HhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHH--hcCCC--------CCccchH-HHHHHHhhcCCCCCchHHH
Q 025620 31 KASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNR--YKDPY--------LDMILVD-GITLLCNDLQVDPQDIVML 96 (250)
Q Consensus 31 ~~~~w~le~A~~~f~~~~~~~~~~~~~~l~~lF~~--Y~~~~--------~d~i~~d-G~~~~~edLgv~~ed~~~L 96 (250)
+.++|.|.. +.||.-.+++..+-..+-+.+|++ |+|.. .+.+-++ =+.+..++.||+||++.+|
T Consensus 93 QyAGW~l~~--g~ffamGSGPaRala~kpe~ly~~l~Y~D~~~~avl~lEs~~lP~~~v~e~iA~~cgV~p~~v~~l 167 (316)
T 1qlm_A 93 QKAGWQVQV--GDYFAMGSGPARALALKPKETYEEIDYEDDADVAILCLESSELPDEDVAEHVADECGVDPENLYLL 167 (316)
T ss_dssp TSCCEEEEE--TTEEEEEESTTHHHHTSSHHHHHHHTCCCCCSCEEEEEECSSCCCHHHHHHHHHHHTSCGGGEEEE
T ss_pred hhccceecc--CceeeccChHHHHHhcCchhhHHhcCccccCCceEEEEecCCCCCHHHHHHHHHHcCCCHHHEEEE
Confidence 348999975 789977655332222222467776 55541 2333333 4557779999999987544
No 345
>2ld7_B Paired amphipathic helix protein SIN3A; transcription; NMR {Mus musculus}
Probab=32.13 E-value=1.3e+02 Score=21.04 Aligned_cols=59 Identities=10% Similarity=0.183 Sum_probs=44.3
Q ss_pred HHHHHHHHHccchHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHhhcCCCCchhHHHHHHHHH
Q 025620 132 ERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQ 195 (250)
Q Consensus 132 ~~l~~L~~~l~~~~~Fk~~Y~f~F~~~~~~~qk~l~~d~Ai~~W~lll~~~~~~~l~~w~~Fl~ 195 (250)
..+..+++.+.++..+.+|-+-.-.|. |..++...-+..=..+|+.+ ..+++.|.+||.
T Consensus 13 ~Ff~kVK~~l~~~~~Y~eFLk~lnlf~----q~~Id~~eLv~~V~~~lg~~-pdL~~~Fk~Fl~ 71 (75)
T 2ld7_B 13 LFFDKVRKALRSAEAYENFLRCLVIFN----QEVISRAELVQLVSPFLGKF-PELFNWFKNFLG 71 (75)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHH----TTCSCHHHHHHHTHHHHTTC-HHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhh----hcCcCHHHHHHHHHHHHccC-HHHHHHHHHHcC
Confidence 455667777767666777777666666 66788888888888889876 678999999984
No 346
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=31.22 E-value=96 Score=30.11 Aligned_cols=65 Identities=9% Similarity=0.155 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc-CCC-CCchHHHHHHHhhccc----ccccccHHHHHHHHHH
Q 025620 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL-QVD-PQDIVMLVVSWHMKAA----TMCEFSKQEFIGGLQS 121 (250)
Q Consensus 56 ~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edL-gv~-~ed~~~LvLa~~l~a~----~~g~~tr~ef~~g~~~ 121 (250)
...|.++|..|-. +.+.|+.+-+.+++..+ |.. ..+-.+--|....... .-|.|+-+||++-|..
T Consensus 79 ~~el~~aF~~fD~-~~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s 149 (624)
T 1djx_A 79 RAEIDRAFEEAAG-SAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS 149 (624)
T ss_dssp CHHHHHHHHHHHT-TSSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHS
T ss_pred HHHHHHHHHHhcC-CCCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcC
Confidence 3678999999975 35689999999999876 543 3222222222222222 3589999999998875
No 347
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=31.19 E-value=23 Score=25.58 Aligned_cols=51 Identities=16% Similarity=0.126 Sum_probs=33.0
Q ss_pred CCCCchHHHHHHH-hhcccccccccHHHHHHHHHHcCCC-CHHHHHHHHHHHH
Q 025620 88 VDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGID-SLDKFRERISFMR 138 (250)
Q Consensus 88 v~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~~~-si~~lk~~l~~L~ 138 (250)
++.+...-|.=|+ .+-...-|.|+++|+...++.+|.. |-+.++..+..++
T Consensus 30 l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D 82 (100)
T 2lv7_A 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLD 82 (100)
T ss_dssp CCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHC
Confidence 3444444444344 3456677999999999999999975 4455555555443
No 348
>2p6v_A Transcription initiation factor TFIID subunit 4; alpha helix; HET: MLY; 2.00A {Homo sapiens} SCOP: a.277.1.1
Probab=30.52 E-value=70 Score=24.59 Aligned_cols=51 Identities=14% Similarity=0.108 Sum_probs=38.6
Q ss_pred chHHHHHHHhhcccccccccHHHHHHHHHHcC-----CCCHHHHHHHHHHHHHHccchHHH
Q 025620 92 DIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG-----IDSLDKFRERISFMRAELKDEQKF 147 (250)
Q Consensus 92 d~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~-----~~si~~lk~~l~~L~~~l~~~~~F 147 (250)
.+..||+.-. .|.|+-|||..-++..= -.-++=||+.||.||+++.+...|
T Consensus 45 ~Vr~LVq~Ll-----~~~i~~EeFt~~Lq~~lns~pqP~LvPFLK~sLP~LR~~l~~~~~~ 100 (114)
T 2p6v_A 45 NVXELVQNLL-----DGXIEAEDFTSRLYRELNSSPQPYLVPFLXRSLPALRQLTPDSAAF 100 (114)
T ss_dssp HHHHHHHHHH-----TTSSCHHHHHHHHHHHTTCCCCTTHHHHHHHHHHHHHHTCSCHHHH
T ss_pred HHHHHHHHHH-----HccCCHHHHHHHHHHHHcCCCCcchHHHHHhhhHHHHHHHHHHHHH
Confidence 3555665443 37899999999988742 234677999999999999888776
No 349
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=30.43 E-value=22 Score=31.25 Aligned_cols=36 Identities=19% Similarity=0.155 Sum_probs=10.2
Q ss_pred HHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 025620 12 LQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (250)
Q Consensus 12 i~~F~~iT~~s~~~A~~~L~~~~w~le~A~~~f~~~ 47 (250)
.+-.+++||++.++|...|+++++++-.||-....+
T Consensus 248 ~~~i~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~~~ 283 (306)
T 1nri_A 248 VRIVMQATDCNKTLAEQTLLEADQNAKLAIMMILST 283 (306)
T ss_dssp HHHHHHHSCCCC------------------------
T ss_pred HHHHHHHhCCCHHHHHHHHHHhCCChHHHHHHHHhC
Confidence 566788999999999999999999999999887543
No 350
>2qfz_A TBC1 domain family member 22A; RAB-GAP, GTPase activator, structural genomics, structural genomics consortium, SGC, hydrolase activator; 2.10A {Homo sapiens} PDB: 3dzx_A
Probab=28.94 E-value=1.4e+02 Score=26.04 Aligned_cols=31 Identities=26% Similarity=0.582 Sum_probs=26.7
Q ss_pred HHHHHhhhhcCCccccHHHHHHHHHhhcCCC
Q 025620 152 NFAFAWAKEKGQKSLALDTAIGMWQLLFAEK 182 (250)
Q Consensus 152 ~f~F~~~~~~~qk~l~~d~Ai~~W~lll~~~ 182 (250)
.|++.+.+-=-.+.+++++++.+|+.+|...
T Consensus 244 ~f~~~W~~~lF~~~~p~~~~lrlWD~~l~~g 274 (345)
T 2qfz_A 244 QFAFRWMNNLLMREVPLRCTIRLWDTYQSEP 274 (345)
T ss_dssp HHHHHHHHTTTTTTSCHHHHHHHHHHHTTST
T ss_pred hHHHHHHHHHHcccCCHHHHHHHHHHHHhCC
Confidence 3778887777788999999999999999875
No 351
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=28.63 E-value=74 Score=23.26 Aligned_cols=48 Identities=13% Similarity=0.061 Sum_probs=30.9
Q ss_pred CCCCchHHHHHHHhhcccccccccHHHHHHHHHHcCCCCHHHHHHHHHH
Q 025620 88 VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISF 136 (250)
Q Consensus 88 v~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l~~ 136 (250)
+++++..-+.-++..=-+.-|.||.+|....++.+|++ .+.+...+..
T Consensus 9 ls~~e~~~~~~~F~~~D~~dG~Is~~el~~~l~~~gl~-~~el~~i~~~ 56 (106)
T 1eh2_A 9 VKPEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLP-VDILGRVWEL 56 (106)
T ss_dssp SCHHHHHHHHHHHTTSCCSSSCCBHHHHHHHHHTTTCC-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCeEcHHHHHHHHHHcCCC-HHHHHHHHHH
Confidence 34445555555554322266999999999999999854 4555554443
No 352
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=28.59 E-value=85 Score=21.71 Aligned_cols=51 Identities=14% Similarity=0.145 Sum_probs=31.2
Q ss_pred ccccHHHHHHHHHH-----cCCC-CHHHHHHHHHHHHHHccchHHHHHHHHHHHHhh
Q 025620 108 CEFSKQEFIGGLQS-----LGID-SLDKFRERISFMRAELKDEQKFREIYNFAFAWA 158 (250)
Q Consensus 108 g~~tr~ef~~g~~~-----l~~~-si~~lk~~l~~L~~~l~~~~~Fk~~Y~f~F~~~ 158 (250)
|.|+++|+...++. +|.. +.+.++..+..++..=...-.|.+|-...-..+
T Consensus 26 g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l~ 82 (92)
T 3rm1_A 26 HKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMIT 82 (92)
T ss_dssp TSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred CeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 59999999999999 7754 556666666555432111112666655544433
No 353
>3he4_B Synzip5; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=28.39 E-value=89 Score=19.52 Aligned_cols=18 Identities=11% Similarity=0.366 Sum_probs=13.6
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 025620 123 GIDSLDKFRERISFMRAE 140 (250)
Q Consensus 123 ~~~si~~lk~~l~~L~~~ 140 (250)
|..|+..||.+|.+|..+
T Consensus 1 gsntvkelknyiqeleer 18 (46)
T 3he4_B 1 GSNTVKELKNYIQELEER 18 (46)
T ss_dssp --CCHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHH
Confidence 356888999999988765
No 354
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=27.52 E-value=1.3e+02 Score=19.72 Aligned_cols=42 Identities=10% Similarity=0.078 Sum_probs=29.2
Q ss_pred CCCCchHHHHHHH-hhcccccccccHHHHHHHHHHcCCC-CHHH
Q 025620 88 VDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGID-SLDK 129 (250)
Q Consensus 88 v~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~~~-si~~ 129 (250)
++++...-+.-++ .+-...-|.|+++++...++.+|.. |...
T Consensus 8 l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~ 51 (86)
T 1j7q_A 8 LGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRE 51 (86)
T ss_dssp CSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHH
Confidence 4555555554444 3456667999999999999999975 3333
No 355
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=27.52 E-value=34 Score=26.72 Aligned_cols=63 Identities=16% Similarity=0.180 Sum_probs=42.3
Q ss_pred cchHHHHHHHhhcCCCCCchHH-------HHHHHhhccccccc----ccHHHHHHHHHHcCCCCHHHHHHHHHH
Q 025620 74 ILVDGITLLCNDLQVDPQDIVM-------LVVSWHMKAATMCE----FSKQEFIGGLQSLGIDSLDKFRERISF 136 (250)
Q Consensus 74 i~~dG~~~~~edLgv~~ed~~~-------LvLa~~l~a~~~g~----~tr~ef~~g~~~l~~~si~~lk~~l~~ 136 (250)
=.++++.+.|+.||++|+++.+ +..|...|....+. -+.++....-...-++|+..|...|..
T Consensus 143 p~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~~ 216 (226)
T 3mc1_A 143 TKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILE 216 (226)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHHH
Confidence 3678999999999999886544 67777888766543 355554333333446788877766544
No 356
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=27.33 E-value=54 Score=23.09 Aligned_cols=35 Identities=11% Similarity=0.115 Sum_probs=25.8
Q ss_pred cccccccccHHHHHHHHHHcCCC-CHHHHHHHHHHH
Q 025620 103 KAATMCEFSKQEFIGGLQSLGID-SLDKFRERISFM 137 (250)
Q Consensus 103 ~a~~~g~~tr~ef~~g~~~l~~~-si~~lk~~l~~L 137 (250)
-...-|.|+++++...+..+|.. |.+.++..+..+
T Consensus 42 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~ 77 (107)
T 2d58_A 42 DLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEV 77 (107)
T ss_dssp CCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 44556999999999999999875 555565555443
No 357
>4gvq_A Methenyltetrahydromethanopterin cyclohydrolase; HET: N4M; 1.30A {Archaeoglobus fulgidus} PDB: 4gvr_A 4gvs_A*
Probab=27.33 E-value=3.2 Score=37.62 Aligned_cols=65 Identities=17% Similarity=0.427 Sum_probs=40.3
Q ss_pred HhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHH--hcCC--------CCCccchH-HHHHHHhhcCCCCCchHHHH
Q 025620 31 KASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNR--YKDP--------YLDMILVD-GITLLCNDLQVDPQDIVMLV 97 (250)
Q Consensus 31 ~~~~w~le~A~~~f~~~~~~~~~~~~~~l~~lF~~--Y~~~--------~~d~i~~d-G~~~~~edLgv~~ed~~~Lv 97 (250)
+.++|.|.. +.||.-.+++..+-..+-+++|++ |+|. +.|.+-++ =+.+.+++.||+|+++.+|+
T Consensus 93 QyAGW~l~~--~~f~amGSGPaRALa~k~e~lf~~l~Y~D~~~~avl~lEs~~lP~~~v~~~iA~~cgv~p~~l~llv 168 (316)
T 4gvq_A 93 QKAGWQIKV--DKYFAMGSGPARALALKPKKTYERIEYEDDADVAVIALEANQLPDEKVMEFIAKECDVDPENVYALV 168 (316)
T ss_dssp TSCCEEEEE--TTEEEEEESTTHHHHTSSHHHHHHHTCCCCCSCEEEEEECSSCCCHHHHHHHHHHHTSCGGGEEEEE
T ss_pred cccCccccc--CCEeeecCcHHHHhhcCcHhHHHHcCceeccccEEEEEEcCCCCCHHHHHHHHHHcCCCHHHEEEEE
Confidence 678999975 789876554322221222567776 5554 12344444 45577799999999986543
No 358
>1g1e_B SIN3A; four-helix bundle, protein-peptide complex, transcription; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1s5q_B 1s5r_B 2l9s_B
Probab=26.87 E-value=97 Score=22.40 Aligned_cols=68 Identities=13% Similarity=0.280 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHhhhhc-C--------CccccHHHHHHHHHhhcCCCCchhHHHHHHHH
Q 025620 126 SLDKFRERISFMRAELKD-EQKFREIYNFAFAWAKEK-G--------QKSLALDTAIGMWQLLFAEKQWPLVDHWCQFL 194 (250)
Q Consensus 126 si~~lk~~l~~L~~~l~~-~~~Fk~~Y~f~F~~~~~~-~--------qk~l~~d~Ai~~W~lll~~~~~~~l~~w~~Fl 194 (250)
+..+-..+|..++....+ |..+++|-.-.-.|-++. + .+.++.+..++-...||.++ ..++..|..||
T Consensus 9 ~~~~A~~YvnkVK~rF~~~p~~Y~~FL~IL~~y~~~~~~~~~~~~~~~~~~~~~~V~~~V~~LF~~h-~DLl~~F~~FL 86 (89)
T 1g1e_B 9 EFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVARLFKNQ-EDLLSEFGQFL 86 (89)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCSCCHHHHHHHHHHHTTTC-HHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHhccCccccccccccccccHHHHHHHHHHHHccC-HHHHHHHHHHC
Confidence 345566778888888865 455888877666664431 1 12455678888889999987 67888888776
No 359
>3qye_A TBC1 domain family member 1; rabgap, RAB, myocytes, hydrolase activator; 2.20A {Homo sapiens} PDB: 3qyb_A
Probab=26.28 E-value=89 Score=27.22 Aligned_cols=67 Identities=10% Similarity=0.258 Sum_probs=39.0
Q ss_pred HHHHhhhhcCCccccHHHHHHHHHhhcCCCCchh-HHHHHHHHHhhcCCCCCHhhHHHHHHHHhhhCCC
Q 025620 153 FAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPL-VDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPA 220 (250)
Q Consensus 153 f~F~~~~~~~qk~l~~d~Ai~~W~lll~~~~~~~-l~~w~~Fl~~~~~k~IskD~W~~~l~F~~~~~~~ 220 (250)
|++.+-.-=-.+.++++.++.+|+.+|... .++ +--=+..|......-+..+.-..++.|++..-++
T Consensus 224 ~~~~W~l~lF~~~lp~~~~lrlwD~~l~~g-~~~l~~valaiL~~~~~~ll~~~~~~~il~~l~~~~p~ 291 (331)
T 3qye_A 224 YAAPWFLTMFASQFPLGFVARVFDMIFLQG-TEVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPN 291 (331)
T ss_dssp TSHHHHHSTTTTTSCHHHHHHHHHHHHHHC-TTHHHHHHHHHHHHTHHHHHTCCSHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHhhhhCCHHHHHHHHHHHHHCC-cHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhCCC
Confidence 566666666678899999999999999875 332 1112223322222112223556677777654343
No 360
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=26.10 E-value=64 Score=21.59 Aligned_cols=36 Identities=33% Similarity=0.470 Sum_probs=26.7
Q ss_pred cchHHHHHHHHhhhCCCHHHHHHHHHhCCC-Cchhhhh
Q 025620 6 RSNRDKLQQFVSITGASEKAALQALKASDW-HLEGAFD 42 (250)
Q Consensus 6 ~~q~~~i~~F~~iT~~s~~~A~~~L~~~~w-~le~A~~ 42 (250)
+..++.+.+.+++ |.+++.|...|+..+- .|+.|++
T Consensus 7 ~vn~qmlq~L~eM-GFd~erae~Alk~Tg~~Gle~Ame 43 (54)
T 2cos_A 7 GVNRQMLQELVNA-GCDQEMAGRALKQTGSRSIEAALE 43 (54)
T ss_dssp SCCHHHHHHHHHH-HCCHHHHHHHHHHHTSCCHHHHHH
T ss_pred hhHHHHHHHHHHc-CCCHHHHHHHHHHhCcccHHHHHH
Confidence 3445667777775 8999999999998883 2777775
No 361
>3q8k_A Flap endonuclease 1; helix-3 turn-helix, hydrophobic wedge, 3' flap binding site, hydrolase-DNA complex, DNA repair, replication; HET: DNA; 2.20A {Homo sapiens} PDB: 3q8l_A* 3q8m_A*
Probab=25.82 E-value=1.6e+02 Score=26.21 Aligned_cols=83 Identities=8% Similarity=0.086 Sum_probs=52.7
Q ss_pred HHHHHHHHhhhC---------CCHHHHHHHHHhCCCCchhhhhhhhccCCCCC-cCCHHHHHHHHHHhcCC-C--C----
Q 025620 9 RDKLQQFVSITG---------ASEKAALQALKASDWHLEGAFDVFYSQPQSKS-LTDTRHLEELYNRYKDP-Y--L---- 71 (250)
Q Consensus 9 ~~~i~~F~~iT~---------~s~~~A~~~L~~~~w~le~A~~~f~~~~~~~~-~~~~~~l~~lF~~Y~~~-~--~---- 71 (250)
.+.+-.|+.++| +-+++|.++|+.++ +++..++..=......+ .-......++| ...+- . +
T Consensus 219 ~~q~id~~~L~G~D~~~gipGiG~KtA~kll~~~g-sle~i~~~~~~~k~~~~~~~~~~~~r~l~-l~~~V~~~~~~~l~ 296 (341)
T 3q8k_A 219 QEQFVDLCILLGSDYCESIRGIGPKRAVDLIQKHK-SIEEIVRRLDPNKYPVPENWLHKEAHQLF-LEPEVLDPESVELK 296 (341)
T ss_dssp HHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHC-SHHHHHHHSCTTTSCCCTTCCHHHHHHHH-HSCCCCCTTTSCCC
T ss_pred HHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHHcC-CHHHHHHHHHhcCCCCCcccchHHHHHHh-CCCCCCCCcccccC
Confidence 345777888888 56899999999998 88876665432221111 11145677788 33321 1 1
Q ss_pred -CccchHHHHHHH-hhcCCCCCch
Q 025620 72 -DMILVDGITLLC-NDLQVDPQDI 93 (250)
Q Consensus 72 -d~i~~dG~~~~~-edLgv~~ed~ 93 (250)
...+.+++..|+ +.+|.++|-+
T Consensus 297 ~~~pd~~~l~~fl~~~~~f~~~rv 320 (341)
T 3q8k_A 297 WSEPNEEELIKFMCGEKQFSEERI 320 (341)
T ss_dssp CCCCCHHHHHHHHTTTTCCCHHHH
T ss_pred CCCCCHHHHHHHHHHhcCCCHHHH
Confidence 157778888888 8888877543
No 362
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=25.71 E-value=37 Score=27.14 Aligned_cols=65 Identities=8% Similarity=0.016 Sum_probs=42.4
Q ss_pred ccchHHHHHHHhhcCCCCCchH-------HHHHHHhhcccccc----cccHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 025620 73 MILVDGITLLCNDLQVDPQDIV-------MLVVSWHMKAATMC----EFSKQEFIGGLQSLGIDSLDKFRERISFM 137 (250)
Q Consensus 73 ~i~~dG~~~~~edLgv~~ed~~-------~LvLa~~l~a~~~g----~~tr~ef~~g~~~l~~~si~~lk~~l~~L 137 (250)
+=.++++.+.|+.||++|+++. =+..|...|....+ .-..++....-...-++|+..|...|.+|
T Consensus 166 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l~~l 241 (243)
T 3qxg_A 166 KPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWDTI 241 (243)
T ss_dssp TTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHHHhh
Confidence 3457899999999999997654 36677777766543 23444443322233467888888777654
No 363
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=25.26 E-value=1e+02 Score=23.23 Aligned_cols=73 Identities=12% Similarity=0.199 Sum_probs=42.3
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHcCCC-CHHHHHH
Q 025620 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGID-SLDKFRE 132 (250)
Q Consensus 55 ~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~~~-si~~lk~ 132 (250)
....+.+++..+-.+. +....+.+ .+...-+.-++ .+-...-|.|+++|+...++.+|.. +-+.++.
T Consensus 22 ~~~~~~~i~~~~d~~~-~~~~~~~l----------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~ 90 (150)
T 2jjz_A 22 QERRLAEINREFLCDQ-KYSDEENL----------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKK 90 (150)
T ss_dssp HHHHHHHHHHHHHTCG-GGSSCTTH----------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHH
T ss_pred cHHHHHHHHHHhccCC-CchhhHhH----------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHH
Confidence 3467777887775431 11111111 22233333343 3345556999999999999999865 4555665
Q ss_pred HHHHHH
Q 025620 133 RISFMR 138 (250)
Q Consensus 133 ~l~~L~ 138 (250)
.+..+.
T Consensus 91 l~~~~D 96 (150)
T 2jjz_A 91 MISEVT 96 (150)
T ss_dssp HHHHHH
T ss_pred HHHHHC
Confidence 555544
No 364
>2i5u_A DNAD domain protein; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG, U function; HET: MSE; 1.50A {Enterococcus faecalis} SCOP: a.275.1.1
Probab=25.18 E-value=37 Score=23.97 Aligned_cols=56 Identities=7% Similarity=0.194 Sum_probs=29.9
Q ss_pred cchHHHHHHHhhcCC---C---CCchHHHHHHHhh--cccccccccHHHHHHHHHHcCCCCHHHHH
Q 025620 74 ILVDGITLLCNDLQV---D---PQDIVMLVVSWHM--KAATMCEFSKQEFIGGLQSLGIDSLDKFR 131 (250)
Q Consensus 74 i~~dG~~~~~edLgv---~---~ed~~~LvLa~~l--~a~~~g~~tr~ef~~g~~~l~~~si~~lk 131 (250)
+..+-+..++++.+. + +.+++...+-..+ +.+++..+ +.-+..|++-|+.|+++.+
T Consensus 19 ~e~e~i~~w~~~~~~~~~~~~~~~elI~~A~~~av~~~~~~~~Yi--~~IL~~W~~~gi~T~e~v~ 82 (83)
T 2i5u_A 19 KTMTDFDYWISDFEKIGASQKEAEQLIVKAIEIAIDANARNYNYI--NAILKDWEQRGFKSVEERE 82 (83)
T ss_dssp HHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTCCSHHHH--HHHHHHHHHHTCCC-----
T ss_pred HHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHcCCCCHHHH--HHHHHHHHHcCCCCHHHHh
Confidence 455566677776621 1 2234443444333 44554444 6678889999999998875
No 365
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=25.14 E-value=70 Score=23.29 Aligned_cols=75 Identities=4% Similarity=-0.067 Sum_probs=38.2
Q ss_pred chHHHHHHH-hhcccccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhhcCCcccc
Q 025620 92 DIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLA 167 (250)
Q Consensus 92 d~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l~~L~~~l~~~~~Fk~~Y~f~F~~~~~~~qk~l~ 167 (250)
+..-+.-++ .+-...-|.|+.+|+...++..++ +.+.++..+..++..=...-.|.+|......+......+.|+
T Consensus 12 ~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~-~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~~~~~~G~~lp 87 (111)
T 2kgr_A 12 SRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSL-PQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLP 87 (111)
T ss_dssp HHHHHHHHHHTTSCSSCCEEEHHHHHHHHHTTCC-CHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhCCC-CHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHHHCCCCCc
Confidence 333343333 334556799999999999985544 345555544433211000112666655554444333333444
No 366
>1e91_A Paired amphipathic helix protein SIN3B; eukaryotic transcriptional regulation, SIN3, PAH domains, protein-protein interactions; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1pd7_A
Probab=24.87 E-value=1.9e+02 Score=20.56 Aligned_cols=67 Identities=15% Similarity=0.284 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHccc-hHHHHHHHHHHHHhhhhc-C-----CccccHHHHHHHHHhhcCCCCchhHHHHHHHH
Q 025620 127 LDKFRERISFMRAELKD-EQKFREIYNFAFAWAKEK-G-----QKSLALDTAIGMWQLLFAEKQWPLVDHWCQFL 194 (250)
Q Consensus 127 i~~lk~~l~~L~~~l~~-~~~Fk~~Y~f~F~~~~~~-~-----qk~l~~d~Ai~~W~lll~~~~~~~l~~w~~Fl 194 (250)
+.+-..+|..++....+ |..+++|-.-.-.|-++. + .+++++...++-=..||.++ ..++..|-.||
T Consensus 7 ~~~A~~yv~kVK~rF~~~p~~Y~~FL~il~~yk~~~~d~~~~~~~~~s~~eV~~~V~~Lf~~h-pDLl~~F~~FL 80 (85)
T 1e91_A 7 FNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQ-EDLLSEFGQFL 80 (85)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTCSSSCCCSSCCCHHHHHHHHHHHTSSC-HHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHccccccccccccCcHHHHHHHHHHHHccC-HHHHHHHHHHC
Confidence 45566778888888865 455888877666665542 1 23577888888889999988 67888998887
No 367
>3bz6_A UPF0502 protein pspto_2686; APC84902, conserved domain, pseudomonas syringae PV. tomato DC3000, structural genomics, PSI-2; 2.21A {Pseudomonas syringae PV} SCOP: a.4.5.75 a.4.5.75
Probab=24.75 E-value=51 Score=27.41 Aligned_cols=55 Identities=9% Similarity=0.166 Sum_probs=43.8
Q ss_pred HHHhhcCCCCCchHHHHHHHhhcccccccc-cHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Q 025620 81 LLCNDLQVDPQDIVMLVVSWHMKAATMCEF-SKQEFIGGLQSLGIDSLDKFRERISFMRAE 140 (250)
Q Consensus 81 ~~~edLgv~~ed~~~LvLa~~l~a~~~g~~-tr~ef~~g~~~l~~~si~~lk~~l~~L~~~ 140 (250)
+||++|++++..+++|++..+=|..+.|++ ||.+= --..++++.....|..|-..
T Consensus 99 r~~~~l~l~~~e~All~~LlLRGpQT~GELRtRs~R-----l~~F~d~~~Ve~~L~~L~~r 154 (183)
T 3bz6_A 99 KVDKGLELVPAQVILTGLLLLRGPQTVSELLTRSNR-----MHDFEDSEQVVHQLERLIAR 154 (183)
T ss_dssp CHHHHHTCCHHHHHHHHHHHHHCSBCHHHHHHHHTT-----TSCCSSHHHHHHHHHHHHHH
T ss_pred ccchhcCCCHHHHHHHHHHHhcCCCChhHHHHhHhh-----ccccCCHHHHHHHHHHHhcC
Confidence 689999999999999999999999999976 33321 12467899999888888654
No 368
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=24.66 E-value=2.5e+02 Score=23.36 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=18.0
Q ss_pred ccccHHHHHHHHHHc-CCCCHHHHHHHHHHHHH
Q 025620 108 CEFSKQEFIGGLQSL-GIDSLDKFRERISFMRA 139 (250)
Q Consensus 108 g~~tr~ef~~g~~~l-~~~si~~lk~~l~~L~~ 139 (250)
-+|...+|++.+.++ +-.+-...|.++-+|-+
T Consensus 82 ~eias~~fl~~l~~l~~~~~~~~Vk~kil~li~ 114 (226)
T 3zyq_A 82 DEVANKQTMEELKDLLKRQVEVNVRNKILYLIQ 114 (226)
T ss_dssp HHHSSHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred HhhccHHHHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 477888888887664 22233445555444433
No 369
>2es9_A Putative cytoplasmic protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.00A {Salmonella typhimurium} SCOP: a.247.1.1 PDB: 2jn8_A
Probab=23.43 E-value=27 Score=26.27 Aligned_cols=19 Identities=26% Similarity=0.198 Sum_probs=15.6
Q ss_pred ccchHHHHHHHhhcCCCCC
Q 025620 73 MILVDGITLLCNDLQVDPQ 91 (250)
Q Consensus 73 ~i~~dG~~~~~edLgv~~e 91 (250)
.-...||.+|+.+|||...
T Consensus 35 ESTAKGifKyL~elGvPas 53 (115)
T 2es9_A 35 ESTAKGILKYLHDLGVPVS 53 (115)
T ss_dssp HHHHHHHHHHHHHTTCCCC
T ss_pred hHHHHHHHHHHHHcCCCCC
Confidence 4457799999999999664
No 370
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=23.21 E-value=48 Score=24.34 Aligned_cols=48 Identities=4% Similarity=-0.011 Sum_probs=31.9
Q ss_pred CCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHcCCCCHHHHHHHHH
Q 025620 87 QVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERIS 135 (250)
Q Consensus 87 gv~~ed~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~~~si~~lk~~l~ 135 (250)
.+++++..-+.-++ .+-...-|.|+.+|+...++.+|++ .+.++..+.
T Consensus 15 ~ls~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~gl~-~~el~~i~~ 63 (110)
T 1iq3_A 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLS-IPELSYIWE 63 (110)
T ss_dssp CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCS-SCCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCC-HHHHHHHHH
Confidence 35666666555555 3455667999999999999998853 333444443
No 371
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=22.92 E-value=98 Score=26.88 Aligned_cols=49 Identities=16% Similarity=0.388 Sum_probs=40.7
Q ss_pred hHHHHHHHHHhhcCCCCCHhhHHHHHHHHhhhCCCCCCCCcCCCchhhHHHHHHHHHhh
Q 025620 186 LVDHWCQFLQAKHNKAISRDTWSQLLEFARTVDPALSNYDAEGAWPYLIDEFVEYLTEN 244 (250)
Q Consensus 186 ~l~~w~~Fl~~~~~k~IskD~W~~~l~F~~~~~~~ls~YDe~~AWP~liDeFVe~~r~~ 244 (250)
++..--+|+++. .+|-|.|..-++|+..+. ..+-|+.|+|-||+-+...
T Consensus 13 lv~hlh~f~re~---~lT~~E~~~~i~~l~~~G-------~r~E~~Lll~~lvd~~~~~ 61 (254)
T 2boy_A 13 MIAAINAVIKDE---KVSYSEYKASTGWLISVG-------EKNEWPLFLDVFFEHAIES 61 (254)
T ss_dssp HHHHHHHHHHHH---TCCHHHHHHHHHHHHHHH-------HTTCHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHh---CCCHHHHHHHHHHHHHHh-------hcCcHHHHHHHHHHHHhcc
Confidence 455667788775 499999999999999886 6789999999999887653
No 372
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=22.62 E-value=51 Score=24.52 Aligned_cols=60 Identities=10% Similarity=-0.015 Sum_probs=42.8
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC
Q 025620 58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (250)
Q Consensus 58 ~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~ 123 (250)
.+.+.|..|- ..|+.+-+.+.+..+|. .+..+--+...+....-|.|+.+||+.-|..+.
T Consensus 51 ~l~~aF~~fD----G~I~~~El~~~l~~lG~--t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 110 (123)
T 2kld_A 51 DISESLRQGG----GKLNFDELRQDLKGKGH--TDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLE 110 (123)
T ss_dssp CCSCSSTTTT----TCEEHHHHHHHTTTCCS--SHHHHHHHHHHHSSSSCCEECSHHHHHCSCTTT
T ss_pred HHHHHHHHhC----CCCCHHHHHHHHHHhCC--CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 3444555442 57999999999999998 333333444455667789999999999887765
No 373
>1fkm_A Protein (GYP1P), ORF YOR070C; GAP, YPT/RAB protein, vesicular trafficking, endocytosis, hydrolase, GTPase activation; 1.90A {Saccharomyces cerevisiae} SCOP: a.69.2.1 a.69.2.1 PDB: 2g77_A*
Probab=22.16 E-value=1.8e+02 Score=26.22 Aligned_cols=30 Identities=30% Similarity=0.648 Sum_probs=25.6
Q ss_pred HHHHHhhhhcCCccccHHHHHHHHHhhcCC
Q 025620 152 NFAFAWAKEKGQKSLALDTAIGMWQLLFAE 181 (250)
Q Consensus 152 ~f~F~~~~~~~qk~l~~d~Ai~~W~lll~~ 181 (250)
.|+|.+.+-=-.+.++++.++.+|+.+|..
T Consensus 231 ~f~~rW~l~LF~~~~p~~~vlrlWD~~l~e 260 (396)
T 1fkm_A 231 QFAFRWMNCLLMREFQMGTVIRMWDTYLSE 260 (396)
T ss_dssp HHHHHHHHTTTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHC
Confidence 477887777777899999999999999974
No 374
>2f05_A Paired amphipathic helix protein SIN3B; helix bundle, transcription repressor; NMR {Mus musculus} SCOP: a.59.1.1
Probab=21.89 E-value=2.5e+02 Score=20.89 Aligned_cols=72 Identities=14% Similarity=0.252 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHccc-hHHHHHHHHHHHHhhhhcC------CccccHHHHHHHHHhhcCCCCchhHHHHHHHHHhhcC
Q 025620 127 LDKFRERISFMRAELKD-EQKFREIYNFAFAWAKEKG------QKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHN 199 (250)
Q Consensus 127 i~~lk~~l~~L~~~l~~-~~~Fk~~Y~f~F~~~~~~~------qk~l~~d~Ai~~W~lll~~~~~~~l~~w~~Fl~~~~~ 199 (250)
+.+-..+|..++....+ |..+++|-.-.-.|-++.- .+.+++...++-=..||.++ ..++..|-.||-....
T Consensus 7 ~~dA~~YvnkVK~rF~d~p~vY~~FL~IL~~yk~~~~d~~g~~~~~~s~~eV~~~V~~LF~~h-pDLl~eFn~FLP~~~~ 85 (105)
T 2f05_A 7 FNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQ-EDLLSEFGQFLPEAKR 85 (105)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSSSSSSSSCCCCHHHHHHHHHHHTTTC-HHHHHHHHHHSCGGGC
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHhccccccccccccCcHHHHHHHHHHHHccC-HHHHHHHHHHCCCccc
Confidence 44556778888888865 4558887776666655431 23467788888888899988 6889999999965544
No 375
>3zq7_A KDP operon transcriptional regulatory protein KDP; response regulator; 2.52A {Escherichia coli}
Probab=21.15 E-value=1.4e+02 Score=21.04 Aligned_cols=55 Identities=11% Similarity=0.212 Sum_probs=38.4
Q ss_pred CCCCchHHHHHHHhhcccccccccHHHHHHHHHH-cCCCCHHHHHHHHHHHHHHccc
Q 025620 88 VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS-LGIDSLDKFRERISFMRAELKD 143 (250)
Q Consensus 88 v~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~-l~~~si~~lk~~l~~L~~~l~~ 143 (250)
|.+...+.-+|+.++..+.- .+||++.++..-. -...+-..++.+|..||+.|.+
T Consensus 27 i~Lt~~e~~lL~~L~~~~g~-~vsr~~L~~~vw~~~~~~~~~~l~~~I~rLRkkL~~ 82 (102)
T 3zq7_A 27 VHLTPIEFRLLAVLLNNAGK-VLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQ 82 (102)
T ss_dssp ECCCHHHHHHHHHHHHTTTC-EEEHHHHHHHHTSSSCSTTHHHHHHHHHHHHHHHCS
T ss_pred EEcCHHHHHHHHHHHHCCCe-eECHHHHHHHhcCCCCCCccchHHHHHHHHHHHhhc
Confidence 45555666677777765432 7999999876433 2234556899999999999854
No 376
>1gxq_A PHOB, phosphate regulon transcriptional regulatory protein; transcriptional activator, helix-winged-helix, sensory transduction; 2.0A {Escherichia coli} SCOP: a.4.6.1 PDB: 1gxp_A 1qqi_A 2z33_A 3t72_A
Probab=21.12 E-value=1.7e+02 Score=20.74 Aligned_cols=56 Identities=9% Similarity=0.137 Sum_probs=40.1
Q ss_pred CCCCCchHHHHHHHhhcccccccccHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHccc
Q 025620 87 QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG-IDSLDKFRERISFMRAELKD 143 (250)
Q Consensus 87 gv~~ed~~~LvLa~~l~a~~~g~~tr~ef~~g~~~l~-~~si~~lk~~l~~L~~~l~~ 143 (250)
-|.+...+.-+|+.++..+. -.+||++.++..-.-. ..+-..+..+|..||+.|.+
T Consensus 29 ~i~Lt~~E~~lL~~L~~~~g-~vvsr~~L~~~vW~~~~~~~~~~l~~~I~rLRkkL~~ 85 (106)
T 1gxq_A 29 PLEMGPTEFKLLHFFMTHPE-RVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEP 85 (106)
T ss_dssp ECCCCHHHHHHHHHHHHSCS-SEECHHHHHHHHTCSSSCCCTHHHHHHHHHHHHHHGG
T ss_pred EEEcCHHHHHHHHHHHHCCC-eeEcHHHHHHHHcCCCCCCCcccHHHHHHHHHHHhcc
Confidence 35555567777777776654 3899999998653322 23567899999999999854
No 377
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=21.00 E-value=90 Score=23.47 Aligned_cols=61 Identities=13% Similarity=0.309 Sum_probs=39.1
Q ss_pred hhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCchHHHHHHHhh
Q 025620 40 AFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHM 102 (250)
Q Consensus 40 A~~~f~~~~~~~~~~~~~~l~~lF~~Y~~~~~d~i~~dG~~~~~edLgv~~ed~~~LvLa~~l 102 (250)
.+.-.|+.|.. ..++...|.+-|+.+--.-+|.+ +|-+..+|.--++++++.+--.+|+-.
T Consensus 13 ~~~~~~~~~~~-~~Vsae~L~eEfdefGi~~~d~V-ldKc~ELC~~y~lda~e~VeeWmAFst 73 (101)
T 2keb_A 13 SLEVLFQGPGS-MSASAQQLAEELQIFGLDCEEAL-IEKLVELCVQYGQNEEGMVGELIAFCT 73 (101)
T ss_dssp ------------CCCCHHHHHHHHHHHTCBCCHHH-HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred cchheeeCCch-hhccHHHHHHHHHHcCCCCCHHH-HHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 34456666654 57788999999999986433333 478889999999998888888888744
No 378
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=20.89 E-value=29 Score=28.10 Aligned_cols=68 Identities=15% Similarity=0.103 Sum_probs=42.7
Q ss_pred cchHHHHHHHhhcCCCC-CchHH-------HHHHHhhccccccccc--------HHHH---------------HHHHHHc
Q 025620 74 ILVDGITLLCNDLQVDP-QDIVM-------LVVSWHMKAATMCEFS--------KQEF---------------IGGLQSL 122 (250)
Q Consensus 74 i~~dG~~~~~edLgv~~-ed~~~-------LvLa~~l~a~~~g~~t--------r~ef---------------~~g~~~l 122 (250)
=.++++...|+.||++| +++.+ +..|...|....+.=+ ..+| ...++..
T Consensus 169 p~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 248 (277)
T 3iru_A 169 PFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNA 248 (277)
T ss_dssp TSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhC
Confidence 35679999999999999 76543 6677777866543211 1111 1222333
Q ss_pred ----CCCCHHHHHHHHHHHHHHc
Q 025620 123 ----GIDSLDKFRERISFMRAEL 141 (250)
Q Consensus 123 ----~~~si~~lk~~l~~L~~~l 141 (250)
-++|+.+|...|..+.+++
T Consensus 249 ~ad~v~~~~~el~~~l~~~~~~~ 271 (277)
T 3iru_A 249 GAHYVIDSVADLETVITDVNRRL 271 (277)
T ss_dssp TCSEEESSGGGTHHHHHHHHHHH
T ss_pred CCCEEecCHHHHHHHHHHHHHHH
Confidence 3568888888887776654
No 379
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=20.46 E-value=1.9e+02 Score=20.85 Aligned_cols=53 Identities=15% Similarity=0.055 Sum_probs=34.4
Q ss_pred cccccHHHHHHHHHH-c----CC-CCHHHHHHHHHHHHHHccchHHHHHHHHHHHHhhh
Q 025620 107 MCEFSKQEFIGGLQS-L----GI-DSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159 (250)
Q Consensus 107 ~g~~tr~ef~~g~~~-l----~~-~si~~lk~~l~~L~~~l~~~~~Fk~~Y~f~F~~~~ 159 (250)
-|.||++|+...++. + |. .|.+.+...+.+++..=...-.|.+|-......+.
T Consensus 26 ~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~~~ 84 (101)
T 3nso_A 26 KYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLCL 84 (101)
T ss_dssp TTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHHHH
T ss_pred CCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence 389999999999986 4 32 35666777777766442112237777666555443
No 380
>2jxu_A TERB, KP-TERB; tellurite resistance protein, plasmid, unknown function; NMR {Klebsiella pneumoniae ntuh-k2044}
Probab=20.32 E-value=2.8e+02 Score=20.93 Aligned_cols=20 Identities=15% Similarity=0.265 Sum_probs=12.2
Q ss_pred cchHHHHHHHhhcCCCCCch
Q 025620 74 ILVDGITLLCNDLQVDPQDI 93 (250)
Q Consensus 74 i~~dG~~~~~edLgv~~ed~ 93 (250)
-...=+.+.++-|||++.+.
T Consensus 130 ~E~~~L~~ia~~Lgl~~~~~ 149 (153)
T 2jxu_A 130 DEKSAVREIARSLGFDPAEF 149 (153)
T ss_dssp THHHHHHHHHHHTTSCSSCC
T ss_pred HHHHHHHHHHHHhCcCHHHH
Confidence 33344567777777777654
No 381
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=20.28 E-value=83 Score=23.70 Aligned_cols=45 Identities=11% Similarity=0.154 Sum_probs=30.1
Q ss_pred hHHHHHHH-hhcccccccccHHHHHHHHHHcCCC-CHHHHHHHHHHH
Q 025620 93 IVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGID-SLDKFRERISFM 137 (250)
Q Consensus 93 ~~~LvLa~-~l~a~~~g~~tr~ef~~g~~~l~~~-si~~lk~~l~~L 137 (250)
..-+.-++ .+-...-|.|+++|+...+..+|.. +.+.++..+..+
T Consensus 47 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~ 93 (147)
T 1wy9_A 47 LEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREV 93 (147)
T ss_dssp HHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 33344344 3345556999999999999999875 556666555544
No 382
>3v22_V Ribosome modulation factor; stress response, small subunit H movement, stationary phase, ribosome hibernation; 3.00A {Escherichia coli} PDB: 3v24_V
Probab=20.08 E-value=49 Score=22.70 Aligned_cols=19 Identities=11% Similarity=0.274 Sum_probs=15.6
Q ss_pred cccccccccHHHHHHHHHH
Q 025620 103 KAATMCEFSKQEFIGGLQS 121 (250)
Q Consensus 103 ~a~~~g~~tr~ef~~g~~~ 121 (250)
-||-...-.|+.|+.||++
T Consensus 28 ~CPy~~~~~r~~Wl~GWRe 46 (61)
T 3v22_V 28 MCPYQTLNQRSQWLGGWRE 46 (61)
T ss_dssp SCCCSSSHHHHHHHHHHHH
T ss_pred hCCCCCcHHHHHHHHHHHH
Confidence 3666677789999999987
No 383
>2czy_A Paired amphipathic helix protein SIN3B; SIN3, PAH1, transcriptional repressor, gene regulation; NMR {Mus musculus}
Probab=20.07 E-value=2.3e+02 Score=19.70 Aligned_cols=67 Identities=12% Similarity=0.165 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHhhcCCCCchhHHHHHHHHHhh
Q 025620 126 SLDKFRERISFMRAELKD-EQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAK 197 (250)
Q Consensus 126 si~~lk~~l~~L~~~l~~-~~~Fk~~Y~f~F~~~~~~~qk~l~~d~Ai~~W~lll~~~~~~~l~~w~~Fl~~~ 197 (250)
++++-.+.|..++....+ +..+++|-.-.-.|-. ..+++...++==..||.++ ..++..+-.||-..
T Consensus 3 ~~~dA~~yl~~VK~~F~~~p~~Y~~FL~im~~~k~----~~~~~~~v~~rv~~Lf~~h-pdLi~gFn~FLP~~ 70 (77)
T 2czy_A 3 HVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKS----QSIDTPGVIRRVSQLFHEH-PDLIVGFNAFLPLG 70 (77)
T ss_dssp SHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT----TCSCHHHHHHHHHHHTTTC-HHHHHHHHTTSCSS
T ss_pred CHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHH----cCCCHHHHHHHHHHHHcCC-HHHHHHHHHHCCCC
Confidence 455666788888888865 4458888877766653 4577788888888899987 67888888887443
Done!