Your job contains 1 sequence.
>025622
MSTALPMRLLLPLSSVSTTNATTPFFNSIDFPSKFLKSPNPNFNFFASSSHPTQHSWRAR
RTKKTWLCGNMRKDQDMDGLRSEEENVIGMFGSDEDVGTQIPTQAQSVVEGSGAVMVSEF
KPVPDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASG
TNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKTVIEKPHNDHLPLIEASRY
TISFAFFLFC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025622
(250 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1005716651 - symbol:AT2G43945 species:3702 "Ar... 746 6.5e-74 1
TAIR|locus:2080452 - symbol:AT3G59870 "AT3G59870" species... 716 9.9e-71 1
>TAIR|locus:1005716651 [details] [associations]
symbol:AT2G43945 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0010207 "photosystem II
assembly" evidence=RCA] GO:GO:0009570 EMBL:CP002685 IPI:IPI00520843
RefSeq:NP_850404.1 UniGene:At.46732 ProteinModelPortal:F4IT21
PRIDE:F4IT21 EnsemblPlants:AT2G43945.1 GeneID:818999
KEGG:ath:AT2G43945 OMA:QQQGPRS Uniprot:F4IT21
Length = 289
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 160/247 (64%), Positives = 193/247 (78%)
Query: 1 MSTALPMRLLLPLSSVSTTNATTPFFNSIDFPSKFLKSPNPNFNFFASSSH--PTQH--- 55
MS++LP+RLLLPL++ S + P +S PS F +S NPNF SSS +Q
Sbjct: 1 MSSSLPLRLLLPLTT-SLISPPPPPPDSFHAPSSF-RSKNPNFKRRLSSSSCCSSQSQLF 58
Query: 56 SWRARRTKK-TWLC--GNMRKDQDMDGLRSEEENVIGMFGSDEDVGTQIPTQAQSVVEGS 112
S R R + +C +MR ++ + L +++++ + SDED G +IPTQAQ++VEGS
Sbjct: 59 SGRCRSYSRCVTMCLPEHMRNQENTEILTDKDDHIECVLESDEDSGLRIPTQAQAIVEGS 118
Query: 113 GAVMVSEFKPVPDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNH 172
G+V VSE KP DVDY+QELLAIQQQGPR+IGFFGTRNMGFMHQELIEILSYA+VITKNH
Sbjct: 119 GSVAVSELKPAADVDYIQELLAIQQQGPRSIGFFGTRNMGFMHQELIEILSYAMVITKNH 178
Query: 173 IYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKTVIEKPHNDHL 232
IYTSGASGTNAAVIRGALRAERP+LLTVILPQSLKKQPPESQELL+KV+ V+EKPHNDHL
Sbjct: 179 IYTSGASGTNAAVIRGALRAERPELLTVILPQSLKKQPPESQELLSKVQNVVEKPHNDHL 238
Query: 233 PLIEASR 239
PL+EASR
Sbjct: 239 PLLEASR 245
>TAIR|locus:2080452 [details] [associations]
symbol:AT3G59870 "AT3G59870" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0010207 "photosystem II assembly" evidence=RCA] GO:GO:0009570
EMBL:CP002686 EMBL:AL138647 IPI:IPI00531661 PIR:T47811
RefSeq:NP_191546.1 UniGene:At.28158 ProteinModelPortal:Q9M1Y7
STRING:Q9M1Y7 PRIDE:Q9M1Y7 EnsemblPlants:AT3G59870.1 GeneID:825157
KEGG:ath:AT3G59870 TAIR:At3g59870 InParanoid:Q9M1Y7 OMA:QGPRTIG
PhylomeDB:Q9M1Y7 ProtClustDB:CLSN2685014 Genevestigator:Q9M1Y7
Uniprot:Q9M1Y7
Length = 288
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 157/249 (63%), Positives = 192/249 (77%)
Query: 1 MSTALPMRLLLPLSSVSTTNATTPFFNSIDFPSKFLKSPNPNFNFFASSSHPTQ-HSWRA 59
MS+ALP++LLLPL++ S +PF + D P+ F + + + +S S Q S R
Sbjct: 1 MSSALPLKLLLPLTTTSLL--PSPFRS--DNPN-FYRRRSSSSTSCSSQSQSFQLFSVRR 55
Query: 60 RRTKKTW----LC-GNMRKDQD-MDGLRSEEENVIGMFGSDEDV---GTQIPTQAQSVVE 110
RR++ + +C +DQD +D ++E+NV F SDED G +IPTQAQ++VE
Sbjct: 56 RRSRSSSPSIPMCFPEQTRDQDDVDSWVNKEDNVTCRFDSDEDTTTTGLRIPTQAQAIVE 115
Query: 111 GSGAVMVSEFKPVPDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK 170
G G++ VSE + VPDVDY+QELLAIQQQGPR IGFFGTRNMGFMHQELI+ILSYA+VITK
Sbjct: 116 GPGSLAVSELQRVPDVDYIQELLAIQQQGPRTIGFFGTRNMGFMHQELIQILSYAMVITK 175
Query: 171 NHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKTVIEKPHND 230
NHIYTSGA+GTNAAVIRGALRAERP+LLTVILPQSLKKQPPESQELL+KV+ VIEKPHND
Sbjct: 176 NHIYTSGAAGTNAAVIRGALRAERPELLTVILPQSLKKQPPESQELLSKVQNVIEKPHND 235
Query: 231 HLPLIEASR 239
HLPL+EASR
Sbjct: 236 HLPLLEASR 244
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 250 250 0.00080 114 3 11 22 0.44 33
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 596 (63 KB)
Total size of DFA: 177 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.92u 0.12s 24.04t Elapsed: 00:00:01
Total cpu time: 23.92u 0.12s 24.04t Elapsed: 00:00:01
Start: Mon May 20 23:13:00 2013 End: Mon May 20 23:13:01 2013