Query 025622
Match_columns 250
No_of_seqs 57 out of 59
Neff 2.0
Searched_HMMs 29240
Date Mon Mar 25 14:06:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025622.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025622hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3maj_A DNA processing chain A; 97.5 0.00042 1.4E-08 63.7 9.9 79 140-222 127-206 (382)
2 2iz6_A Molybdenum cofactor car 97.5 0.00032 1.1E-08 57.7 7.8 65 139-205 12-79 (176)
3 2a33_A Hypothetical protein; s 97.2 0.00064 2.2E-08 57.3 6.5 69 138-208 11-82 (215)
4 1wek_A Hypothetical protein TT 97.2 0.0012 4.3E-08 55.6 8.1 65 135-200 32-98 (217)
5 1t35_A Hypothetical protein YV 97.2 0.001 3.5E-08 54.7 7.4 65 141-207 2-69 (191)
6 1weh_A Conserved hypothetical 97.2 0.00063 2.2E-08 55.0 5.9 62 141-204 2-65 (171)
7 3qua_A Putative uncharacterize 97.1 0.0016 5.4E-08 54.8 8.1 68 138-207 20-89 (199)
8 1rcu_A Conserved hypothetical 96.9 0.0027 9.4E-08 53.1 7.7 63 140-204 23-90 (195)
9 3uqz_A DNA processing protein 96.9 0.0032 1.1E-07 56.0 8.4 79 140-222 106-186 (288)
10 3sbx_A Putative uncharacterize 96.6 0.0086 2.9E-07 50.0 8.3 70 136-207 9-80 (189)
11 1ydh_A AT5G11950; structural g 96.5 0.0066 2.3E-07 51.3 7.4 66 139-206 8-76 (216)
12 3gh1_A Predicted nucleotide-bi 93.5 0.25 8.5E-06 47.2 8.6 69 137-206 144-218 (462)
13 2nx2_A Hypothetical protein YP 93.4 0.43 1.5E-05 38.9 8.8 82 141-223 3-102 (181)
14 3bq9_A Predicted rossmann fold 92.7 0.43 1.5E-05 45.4 8.9 69 138-207 143-217 (460)
15 1j0a_A 1-aminocyclopropane-1-c 64.7 20 0.00069 30.2 7.2 75 154-230 54-129 (325)
16 4gqa_A NAD binding oxidoreduct 64.1 11 0.00037 32.3 5.5 52 186-241 88-140 (412)
17 3iix_A Biotin synthetase, puta 62.9 62 0.0021 26.7 9.7 69 127-199 88-157 (348)
18 3bbn_B Ribosomal protein S2; s 61.6 11 0.00039 32.4 5.2 48 139-192 63-113 (231)
19 3nra_A Aspartate aminotransfer 56.9 5.1 0.00018 32.5 2.1 25 223-247 184-214 (407)
20 4fb5_A Probable oxidoreductase 54.7 8.2 0.00028 31.7 3.0 103 126-241 11-138 (393)
21 2v9d_A YAGE; dihydrodipicolini 54.6 1.1E+02 0.0038 26.8 11.7 115 109-224 32-156 (343)
22 3g7q_A Valine-pyruvate aminotr 52.4 8.2 0.00028 31.6 2.6 24 169-192 98-121 (417)
23 1tv8_A MOAA, molybdenum cofact 51.1 35 0.0012 28.4 6.3 41 128-170 55-95 (340)
24 4aec_A Cysteine synthase, mito 50.7 22 0.00076 32.5 5.5 54 7-73 41-94 (430)
25 4h3v_A Oxidoreductase domain p 50.7 16 0.00054 30.0 4.1 51 186-240 67-118 (390)
26 3h14_A Aminotransferase, class 50.5 7 0.00024 31.9 1.9 23 223-245 166-194 (391)
27 3kax_A Aminotransferase, class 47.7 12 0.0004 30.0 2.8 23 223-245 161-189 (383)
28 2dr1_A PH1308 protein, 386AA l 47.7 8.7 0.0003 30.7 2.0 25 224-248 152-179 (386)
29 3dzz_A Putative pyridoxal 5'-p 47.5 17 0.00058 29.2 3.7 20 171-190 87-106 (391)
30 4dq6_A Putative pyridoxal phos 46.5 12 0.00041 30.0 2.7 23 223-245 169-197 (391)
31 2r8w_A AGR_C_1641P; APC7498, d 46.2 1.5E+02 0.0051 25.8 11.3 117 109-227 35-162 (332)
32 1ug8_A Poly(A)-specific ribonu 45.4 4.8 0.00016 30.8 0.2 32 210-245 6-41 (87)
33 2bkw_A Alanine-glyoxylate amin 45.2 13 0.00045 29.6 2.7 22 223-244 142-166 (385)
34 3ezs_A Aminotransferase ASPB; 45.0 17 0.00058 29.2 3.4 43 128-176 64-114 (376)
35 3ruy_A Ornithine aminotransfer 45.0 25 0.00086 28.6 4.4 36 154-190 79-114 (392)
36 3mc6_A Sphingosine-1-phosphate 44.9 15 0.00051 31.5 3.2 37 155-191 109-148 (497)
37 4eb5_A Probable cysteine desul 44.1 16 0.00053 29.2 3.0 22 223-244 143-167 (382)
38 4hvk_A Probable cysteine desul 44.0 12 0.00042 29.4 2.4 22 223-244 143-167 (382)
39 3kgw_A Alanine-glyoxylate amin 43.4 25 0.00085 28.0 4.1 25 223-247 153-180 (393)
40 1iug_A Putative aspartate amin 43.4 12 0.00041 29.5 2.2 22 223-244 126-150 (352)
41 3vax_A Putative uncharacterize 43.3 12 0.00042 30.2 2.3 26 223-248 164-192 (400)
42 4a3s_A 6-phosphofructokinase; 42.7 10 0.00034 33.6 1.8 18 173-191 6-25 (319)
43 1svv_A Threonine aldolase; str 42.6 12 0.00041 29.4 2.1 23 223-246 150-178 (359)
44 2z9v_A Aspartate aminotransfer 42.6 14 0.00046 29.9 2.5 26 223-248 139-167 (392)
45 3mad_A Sphingosine-1-phosphate 42.3 18 0.0006 31.5 3.3 39 154-192 140-183 (514)
46 1vjo_A Alanine--glyoxylate ami 41.1 14 0.00047 29.9 2.3 25 223-247 164-191 (393)
47 1eg5_A Aminotransferase; PLP-d 40.6 21 0.00072 28.3 3.2 23 223-245 144-169 (384)
48 1c7n_A Cystalysin; transferase 40.3 14 0.00048 30.1 2.2 22 224-245 170-197 (399)
49 2q5c_A NTRC family transcripti 40.2 33 0.0011 27.6 4.4 59 126-185 81-157 (196)
50 2huf_A Alanine glyoxylate amin 39.6 15 0.00051 29.6 2.3 91 156-248 80-177 (393)
51 3f9t_A TDC, L-tyrosine decarbo 39.1 25 0.00085 27.9 3.4 24 224-247 177-203 (397)
52 2c0r_A PSAT, phosphoserine ami 38.8 10 0.00035 30.5 1.2 38 155-192 51-91 (362)
53 2dgk_A GAD-beta, GADB, glutama 37.8 26 0.0009 29.8 3.6 19 172-190 106-124 (452)
54 1kmj_A Selenocysteine lyase; p 37.5 17 0.00057 29.2 2.2 25 223-247 169-196 (406)
55 2ch1_A 3-hydroxykynurenine tra 36.5 21 0.00073 28.7 2.7 112 128-247 56-175 (396)
56 2is8_A Molybdopterin biosynthe 36.3 26 0.0009 27.2 3.2 50 128-182 25-75 (164)
57 2zc0_A Alanine glyoxylate tran 36.2 13 0.00043 30.4 1.3 22 224-245 181-208 (407)
58 3qm2_A Phosphoserine aminotran 35.9 29 0.001 30.4 3.7 37 156-192 75-114 (386)
59 3hdo_A Histidinol-phosphate am 35.8 28 0.00095 28.1 3.3 22 223-244 154-178 (360)
60 1j32_A Aspartate aminotransfer 35.7 13 0.00046 30.0 1.4 21 156-176 100-120 (388)
61 2g2c_A Putative molybdenum cof 35.7 29 0.00098 27.1 3.3 31 152-182 52-82 (167)
62 3ele_A Amino transferase; RER0 35.7 17 0.00059 29.5 2.0 21 223-243 177-203 (398)
63 1mkz_A Molybdenum cofactor bio 35.5 26 0.00091 27.6 3.1 50 128-182 32-82 (172)
64 1sff_A 4-aminobutyrate aminotr 35.4 15 0.00051 30.2 1.7 14 234-247 222-235 (426)
65 3hno_A Pyrophosphate-dependent 35.3 16 0.00056 33.6 2.1 18 173-191 8-27 (419)
66 2fnu_A Aminotransferase; prote 35.2 22 0.00074 28.4 2.5 21 224-244 127-147 (375)
67 2raf_A Putative dinucleotide-b 35.0 74 0.0025 24.9 5.6 61 140-222 19-79 (209)
68 2e7j_A SEP-tRNA:Cys-tRNA synth 34.7 15 0.0005 29.3 1.4 25 223-247 152-179 (371)
69 1zxx_A 6-phosphofructokinase; 34.3 17 0.0006 32.3 2.0 19 173-192 6-26 (319)
70 1pfk_A Phosphofructokinase; tr 34.3 17 0.0006 32.3 2.0 19 173-192 7-27 (320)
71 3ffh_A Histidinol-phosphate am 34.0 20 0.0007 28.7 2.2 103 128-243 72-183 (363)
72 3t18_A Aminotransferase class 33.8 23 0.00077 29.2 2.5 53 119-177 74-132 (413)
73 3lvm_A Cysteine desulfurase; s 33.6 28 0.00097 28.4 3.0 110 128-248 73-196 (423)
74 3euc_A Histidinol-phosphate am 33.5 17 0.00057 29.2 1.6 22 223-244 162-189 (367)
75 3frk_A QDTB; aminotransferase, 33.4 22 0.00075 28.8 2.3 24 224-247 130-153 (373)
76 3e2y_A Kynurenine-oxoglutarate 33.4 26 0.0009 28.5 2.8 22 223-244 172-199 (410)
77 4gs5_A Acyl-COA synthetase (AM 33.2 13 0.00044 31.3 1.0 10 172-181 42-51 (358)
78 3pzy_A MOG; ssgcid, seattle st 33.1 33 0.0011 27.1 3.3 28 156-183 53-80 (164)
79 3dyd_A Tyrosine aminotransfera 33.0 19 0.00064 30.3 1.9 25 223-247 196-226 (427)
80 3c8f_A Pyruvate formate-lyase 32.9 67 0.0023 24.3 4.9 47 128-177 55-107 (245)
81 1rv3_A Serine hydroxymethyltra 32.9 10 0.00035 33.3 0.3 20 172-192 114-133 (483)
82 1uuy_A CNX1, molybdopterin bio 32.8 31 0.001 26.9 3.0 32 151-182 52-84 (167)
83 2pbq_A Molybdenum cofactor bio 32.4 33 0.0011 27.2 3.2 51 128-182 29-81 (178)
84 3zrp_A Serine-pyruvate aminotr 32.2 20 0.0007 28.4 1.9 25 223-247 132-159 (384)
85 2z61_A Probable aspartate amin 31.5 22 0.00076 28.7 2.0 23 223-246 159-184 (370)
86 2rfv_A Methionine gamma-lyase; 31.3 35 0.0012 28.2 3.3 83 157-248 90-182 (398)
87 3ly1_A Putative histidinol-pho 31.2 19 0.00066 28.6 1.6 22 156-177 78-99 (354)
88 3a2b_A Serine palmitoyltransfe 31.0 25 0.00086 28.7 2.3 25 223-247 178-205 (398)
89 1b5p_A Protein (aspartate amin 31.0 17 0.00058 29.8 1.3 21 156-176 101-121 (385)
90 2uyy_A N-PAC protein; long-cha 30.9 49 0.0017 27.0 4.1 45 126-177 11-60 (316)
91 1w3i_A EDA, 2-keto-3-deoxy glu 30.9 2.4E+02 0.0083 23.8 11.1 92 115-207 6-104 (293)
92 1gd9_A Aspartate aminotransfer 30.8 28 0.00096 28.2 2.5 19 172-190 90-108 (389)
93 2yrr_A Aminotransferase, class 30.5 15 0.00052 28.7 0.9 25 223-247 129-156 (353)
94 3piu_A 1-aminocyclopropane-1-c 30.5 25 0.00087 29.3 2.3 22 155-176 120-141 (435)
95 3if2_A Aminotransferase; YP_26 30.5 13 0.00045 30.9 0.6 38 155-192 85-129 (444)
96 1iay_A ACC synthase 2, 1-amino 30.4 22 0.00076 29.5 1.9 45 127-177 87-139 (428)
97 3rq1_A Aminotransferase class 30.3 27 0.00092 28.8 2.4 53 119-177 75-133 (418)
98 1v72_A Aldolase; PLP-dependent 30.1 31 0.0011 27.1 2.6 22 223-244 146-172 (356)
99 3kbq_A Protein TA0487; structu 29.3 43 0.0015 27.2 3.4 48 128-183 27-76 (172)
100 3get_A Histidinol-phosphate am 29.3 32 0.0011 27.5 2.7 21 156-176 92-112 (365)
101 1m32_A 2-aminoethylphosphonate 29.3 25 0.00087 27.5 2.0 22 227-248 143-164 (366)
102 7aat_A Aspartate aminotransfer 29.2 36 0.0012 27.8 2.9 16 175-190 102-117 (401)
103 2cb1_A O-acetyl homoserine sul 29.2 32 0.0011 28.9 2.7 25 223-247 145-172 (412)
104 1d2f_A MALY protein; aminotran 29.2 24 0.00083 28.7 1.9 22 224-245 168-195 (390)
105 3fdb_A Beta C-S lyase, putativ 29.1 31 0.001 27.6 2.4 22 223-244 155-182 (377)
106 1r30_A Biotin synthase; SAM ra 28.9 2.6E+02 0.009 23.6 11.0 63 127-192 103-168 (369)
107 2xzm_B RPS0E; ribosome, transl 28.8 26 0.00091 30.4 2.2 70 139-242 65-138 (241)
108 3ml1_A NAPA, periplasmic nitra 28.7 73 0.0025 30.7 5.4 35 119-153 87-126 (802)
109 3g0t_A Putative aminotransfera 28.7 30 0.001 28.5 2.4 22 224-245 188-215 (437)
110 3nx3_A Acoat, acetylornithine 28.6 46 0.0016 27.2 3.5 40 152-192 77-116 (395)
111 1c4k_A Protein (ornithine deca 28.4 17 0.00058 35.1 1.0 31 156-188 199-229 (730)
112 3i4j_A Aminotransferase, class 28.3 49 0.0017 27.5 3.7 38 154-191 73-111 (430)
113 3nnk_A Ureidoglycine-glyoxylat 28.0 37 0.0013 27.4 2.8 91 156-247 74-170 (411)
114 3ffr_A Phosphoserine aminotran 27.9 23 0.00078 27.9 1.5 35 156-190 46-82 (362)
115 3f0h_A Aminotransferase; RER07 27.8 27 0.00093 27.9 2.0 85 156-247 81-176 (376)
116 2q7w_A Aspartate aminotransfer 27.4 51 0.0017 26.6 3.5 22 223-244 177-204 (396)
117 3tb6_A Arabinose metabolism tr 27.4 1.8E+02 0.0062 22.1 6.5 35 135-170 132-166 (298)
118 3rfq_A Pterin-4-alpha-carbinol 27.3 46 0.0016 27.2 3.3 33 151-183 71-103 (185)
119 3fvs_A Kynurenine--oxoglutarat 27.2 39 0.0013 27.7 2.8 23 223-245 179-207 (422)
120 2nuw_A 2-keto-3-deoxygluconate 26.9 2.8E+02 0.0097 23.3 10.1 92 115-208 6-104 (288)
121 3bwn_A AT1G70560, L-tryptophan 26.9 38 0.0013 28.4 2.8 24 155-178 100-127 (391)
122 2pju_A Propionate catabolism o 26.7 51 0.0018 27.6 3.5 87 126-226 93-197 (225)
123 3rpz_A ADP/ATP-dependent NAD(P 26.6 52 0.0018 28.2 3.6 36 169-205 30-68 (279)
124 1o69_A Aminotransferase; struc 26.5 33 0.0011 28.4 2.3 25 223-247 127-151 (394)
125 2r2n_A Kynurenine/alpha-aminoa 26.4 35 0.0012 28.5 2.5 21 156-176 118-138 (425)
126 3dr4_A Putative perosamine syn 26.3 35 0.0012 27.9 2.3 24 224-247 150-173 (391)
127 1o5k_A DHDPS, dihydrodipicolin 26.3 3E+02 0.01 23.4 10.5 98 106-205 11-118 (306)
128 2dou_A Probable N-succinyldiam 26.2 42 0.0014 27.1 2.8 21 156-176 97-117 (376)
129 1yiz_A Kynurenine aminotransfe 26.2 26 0.00089 29.0 1.6 21 156-176 111-131 (429)
130 1xky_A Dihydrodipicolinate syn 26.2 3E+02 0.01 23.3 11.8 96 110-206 14-119 (301)
131 1t3i_A Probable cysteine desul 26.2 34 0.0012 27.6 2.2 25 223-247 174-201 (420)
132 3ktd_A Prephenate dehydrogenas 26.1 1.6E+02 0.0056 25.6 6.8 69 140-223 8-91 (341)
133 2ojp_A DHDPS, dihydrodipicolin 26.1 2.9E+02 0.01 23.2 11.0 95 110-205 3-107 (292)
134 2x5d_A Probable aminotransfera 26.0 33 0.0011 28.3 2.2 21 156-176 109-129 (412)
135 1v9v_A KIAA0561 protein; helix 25.9 16 0.00056 29.4 0.4 42 135-176 22-63 (114)
136 3dtt_A NADP oxidoreductase; st 25.8 47 0.0016 26.6 3.0 32 138-176 17-48 (245)
137 2nap_A Protein (periplasmic ni 25.7 1.1E+02 0.0037 28.4 5.8 34 119-152 75-113 (723)
138 3dxv_A Alpha-amino-epsilon-cap 25.6 30 0.001 28.9 1.9 38 154-191 87-126 (439)
139 2x5f_A Aspartate_tyrosine_phen 25.5 25 0.00087 29.2 1.4 85 156-243 123-220 (430)
140 2zyj_A Alpha-aminodipate amino 25.5 25 0.00086 28.7 1.4 43 128-176 79-121 (397)
141 1b9h_A AHBA synthase, protein 25.5 71 0.0024 25.9 4.0 22 226-247 134-155 (388)
142 1v2d_A Glutamine aminotransfer 25.4 32 0.0011 27.8 2.0 43 128-176 66-108 (381)
143 3nyt_A Aminotransferase WBPE; 25.3 37 0.0013 27.6 2.3 23 224-246 129-151 (367)
144 2o1b_A Aminotransferase, class 25.3 33 0.0011 28.5 2.1 21 156-176 119-139 (404)
145 3uwc_A Nucleotide-sugar aminot 25.2 31 0.001 27.7 1.8 24 224-247 131-154 (374)
146 1mdo_A ARNB aminotransferase; 25.1 34 0.0012 27.6 2.1 106 128-247 44-156 (393)
147 3b46_A Aminotransferase BNA3; 25.0 25 0.00086 29.9 1.3 23 223-245 206-234 (447)
148 1u08_A Hypothetical aminotrans 24.9 37 0.0013 27.5 2.2 21 156-176 101-121 (386)
149 2bwn_A 5-aminolevulinate synth 24.9 32 0.0011 28.1 1.9 25 223-247 183-210 (401)
150 3tfu_A Adenosylmethionine-8-am 24.9 79 0.0027 27.5 4.5 37 155-191 120-157 (457)
151 1y5e_A Molybdenum cofactor bio 24.7 46 0.0016 26.0 2.7 51 128-183 35-86 (169)
152 3p1t_A Putative histidinol-pho 24.6 35 0.0012 26.8 2.0 22 223-244 140-164 (337)
153 3dvo_A Sgrair restriction enzy 24.6 1.5E+02 0.005 27.5 6.3 70 140-226 141-227 (338)
154 2okj_A Glutamate decarboxylase 24.4 31 0.001 30.0 1.8 38 154-191 133-173 (504)
155 2wkj_A N-acetylneuraminate lya 24.2 3.3E+02 0.011 23.1 12.4 116 109-225 12-137 (303)
156 3tcm_A Alanine aminotransferas 24.1 71 0.0024 28.0 4.1 40 151-190 136-178 (500)
157 3t7v_A Methylornithine synthas 24.1 1.5E+02 0.0051 24.8 5.9 64 127-192 95-161 (350)
158 2f48_A Diphosphate--fructose-6 24.0 33 0.0011 32.9 2.0 19 173-192 77-97 (555)
159 3ojc_A Putative aspartate/glut 23.7 40 0.0014 27.6 2.3 36 122-157 99-138 (231)
160 4dll_A 2-hydroxy-3-oxopropiona 23.7 73 0.0025 26.6 3.9 34 136-176 27-60 (320)
161 1xi9_A Putative transaminase; 23.6 28 0.00095 28.7 1.3 23 223-245 179-207 (406)
162 3cai_A Possible aminotransfera 23.4 51 0.0018 26.7 2.8 25 223-247 170-197 (406)
163 3ixl_A Amdase, arylmalonate de 23.3 2.6E+02 0.009 22.9 7.2 43 133-180 110-152 (240)
164 3hp4_A GDSL-esterase; psychrot 23.3 1.9E+02 0.0067 20.6 5.7 31 172-202 40-74 (185)
165 2x3l_A ORN/Lys/Arg decarboxyla 23.2 12 0.00041 32.5 -1.0 22 156-177 82-103 (446)
166 2ehh_A DHDPS, dihydrodipicolin 23.2 3.4E+02 0.011 22.8 10.8 116 110-227 3-128 (294)
167 3iwt_A 178AA long hypothetical 23.1 50 0.0017 25.5 2.6 50 128-182 44-94 (178)
168 1ax4_A Tryptophanase; tryptoph 23.0 44 0.0015 28.0 2.4 52 120-179 72-131 (467)
169 1vp4_A Aminotransferase, putat 22.9 27 0.00093 29.1 1.1 21 156-176 119-139 (425)
170 1elu_A L-cysteine/L-cystine C- 22.9 38 0.0013 27.0 1.9 20 223-242 159-181 (390)
171 2o0r_A RV0858C (N-succinyldiam 22.8 31 0.0011 28.5 1.4 21 156-176 96-116 (411)
172 3o8o_A 6-phosphofructokinase s 22.7 33 0.0011 34.4 1.9 18 173-191 398-417 (787)
173 2rfg_A Dihydrodipicolinate syn 22.6 3.5E+02 0.012 22.9 10.3 115 111-227 4-128 (297)
174 1sn9_A BBAT, tetrameric beta-B 22.6 43 0.0015 20.9 1.7 17 122-138 3-19 (26)
175 1jlj_A Gephyrin; globular alph 22.5 62 0.0021 26.1 3.2 32 151-182 59-91 (189)
176 1fg7_A Histidinol phosphate am 22.5 35 0.0012 27.8 1.7 44 128-177 63-107 (356)
177 1bw0_A TAT, protein (tyrosine 22.5 41 0.0014 27.6 2.1 21 156-176 114-134 (416)
178 2oqx_A Tryptophanase; lyase, p 22.5 95 0.0033 25.9 4.4 26 223-248 188-220 (467)
179 3m5u_A Phosphoserine aminotran 22.4 36 0.0012 29.6 1.8 20 171-190 70-90 (361)
180 3op7_A Aminotransferase class 22.4 16 0.00053 29.5 -0.4 119 119-248 58-190 (375)
181 4dg8_A PA1221; ANL superfamily 22.1 29 0.001 31.6 1.3 10 172-181 169-178 (620)
182 3rg2_A Enterobactin synthase c 22.1 27 0.00094 31.3 1.1 10 172-181 189-198 (617)
183 3nyq_A Malonyl-COA ligase; A/B 22.0 30 0.001 30.2 1.2 10 172-181 160-169 (505)
184 1di6_A MOGA, molybdenum cofact 22.0 64 0.0022 26.4 3.2 29 154-182 50-79 (195)
185 2epj_A Glutamate-1-semialdehyd 21.8 58 0.002 27.2 2.9 36 154-189 97-132 (434)
186 2pjk_A 178AA long hypothetical 21.8 54 0.0018 26.2 2.6 51 128-183 44-95 (178)
187 1gg4_A UDP-N-acetylmuramoylala 21.8 1.9E+02 0.0066 25.4 6.4 47 128-178 86-134 (452)
188 3obk_A Delta-aminolevulinic ac 21.7 73 0.0025 29.7 3.8 23 126-148 72-95 (356)
189 3o8l_A 6-phosphofructokinase, 21.7 36 0.0012 34.0 1.9 18 173-191 20-39 (762)
190 3a9z_A Selenocysteine lyase; P 21.7 42 0.0014 27.7 2.0 36 156-191 64-100 (432)
191 3lo8_A Ferredoxin--NADP reduct 21.5 2.9E+02 0.01 22.4 7.1 60 128-187 210-280 (311)
192 3kxw_A Saframycin MX1 syntheta 21.5 29 0.001 30.2 1.1 10 172-181 172-181 (590)
193 1v47_A ATP sulfurylase; produc 21.4 91 0.0031 27.9 4.3 122 83-211 95-235 (349)
194 4dql_A Bifunctional P-450/NADP 21.4 2.3E+02 0.0078 25.0 6.8 25 126-150 256-283 (393)
195 3hcw_A Maltose operon transcri 21.3 1.6E+02 0.0055 23.0 5.3 35 135-169 126-160 (295)
196 3gv0_A Transcriptional regulat 21.3 1.8E+02 0.0062 22.5 5.5 36 135-170 122-157 (288)
197 1h7n_A 5-aminolaevulinic acid 21.3 80 0.0027 29.3 4.0 23 126-148 68-91 (342)
198 4f06_A Extracellular ligand-bi 21.2 3.4E+02 0.011 22.1 8.3 130 89-223 143-274 (371)
199 1tzj_A ACC deaminase, 1-aminoc 21.1 1.2E+02 0.0041 25.3 4.8 52 157-208 54-105 (338)
200 4adb_A Succinylornithine trans 21.1 47 0.0016 26.9 2.2 36 155-191 83-118 (406)
201 3l8a_A METC, putative aminotra 21.0 56 0.0019 27.2 2.7 22 170-191 120-141 (421)
202 3opy_B 6-phosphofructo-1-kinas 21.0 37 0.0013 34.9 1.8 18 173-191 576-595 (941)
203 2gb3_A Aspartate aminotransfer 20.9 34 0.0012 28.3 1.3 21 156-176 112-132 (409)
204 1o4s_A Aspartate aminotransfer 20.8 34 0.0012 28.0 1.3 22 155-176 110-131 (389)
205 1pv8_A Delta-aminolevulinic ac 20.7 84 0.0029 29.0 4.0 23 126-148 58-81 (330)
206 1jg8_A L-ALLO-threonine aldola 20.7 54 0.0019 25.9 2.4 52 119-178 33-85 (347)
207 2r91_A 2-keto-3-deoxy-(6-phosp 20.7 3.7E+02 0.013 22.4 10.5 91 115-208 6-103 (286)
208 3qhx_A Cystathionine gamma-syn 20.7 53 0.0018 27.6 2.5 106 126-248 68-184 (392)
209 4huj_A Uncharacterized protein 20.6 2E+02 0.0067 22.5 5.7 28 141-175 24-51 (220)
210 3ipl_A 2-succinylbenzoate--COA 20.6 30 0.001 29.6 1.0 10 172-181 168-177 (501)
211 4gbj_A 6-phosphogluconate dehy 20.6 80 0.0027 26.5 3.6 29 140-175 5-33 (297)
212 3e96_A Dihydrodipicolinate syn 20.4 4E+02 0.014 22.7 10.4 139 101-241 3-158 (316)
213 3n75_A LDC, lysine decarboxyla 20.4 34 0.0012 33.2 1.4 79 159-242 224-323 (715)
214 1w5q_A Delta-aminolevulinic ac 20.4 84 0.0029 29.1 3.9 23 126-148 65-88 (337)
215 3gtz_A Putative translation in 20.4 31 0.0011 26.0 0.9 15 168-182 19-33 (124)
216 2fyf_A PSAT, phosphoserine ami 20.3 30 0.001 28.5 0.9 37 155-191 80-119 (398)
217 1v25_A Long-chain-fatty-acid-C 20.3 34 0.0012 30.0 1.2 10 172-181 181-190 (541)
218 1ddg_A Sulfite reductase (NADP 20.3 2.5E+02 0.0084 24.5 6.7 59 128-186 273-338 (374)
219 1l6s_A Porphobilinogen synthas 20.2 83 0.0028 29.0 3.8 76 126-202 57-189 (323)
220 3opy_B 6-phosphofructo-1-kinas 20.1 42 0.0014 34.5 2.0 18 173-191 186-205 (941)
221 3r44_A Fatty acyl COA syntheta 20.0 30 0.001 30.2 0.8 10 172-181 175-184 (517)
222 4fuq_A Malonyl COA synthetase; 20.0 29 0.001 30.1 0.8 10 172-181 160-169 (503)
No 1
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=97.52 E-value=0.00042 Score=63.71 Aligned_cols=79 Identities=22% Similarity=0.243 Sum_probs=70.3
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccCC-ChhHHHHHH
Q 025622 140 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQ-PPESQELLA 218 (250)
Q Consensus 140 ~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~P~lLTViLPQSL~kQ-p~Es~elLe 218 (250)
.+.|||.|||++.---.+..+-+++.|+..|-.|++-+|-|+-+|+-||||.+ . --.||+-.+++- |++.+++.+
T Consensus 127 ~~~vAIVGsR~~s~yG~~~a~~l~~~La~~g~~VVSGlA~GID~~AH~~AL~~-g---TIaVLg~Gld~~YP~~n~~L~~ 202 (382)
T 3maj_A 127 RPMIAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSS-G---TVAVLAGGHDKIYPAEHEDLLL 202 (382)
T ss_dssp SCEEEEECCSSCCHHHHHHHHHHHHHHHHHTCEEEECCCTTHHHHHHHHHTTT-C---EEEECSSCTTSCSSGGGHHHHH
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHHHHHHCCcEEEeCCccCHHHHHHHHHHhC-C---eEEEECCCcCccCCHhhHHHHH
Confidence 57899999999999999999999999999998888888999999999999997 3 445889999985 889999999
Q ss_pred HHhh
Q 025622 219 KVKT 222 (250)
Q Consensus 219 ~V~~ 222 (250)
++..
T Consensus 203 ~I~~ 206 (382)
T 3maj_A 203 DIIQ 206 (382)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9843
No 2
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=97.48 E-value=0.00032 Score=57.69 Aligned_cols=65 Identities=18% Similarity=0.219 Sum_probs=54.8
Q ss_pred CCceEEEecccc--cchhHHHHHHHHHHHHHHhCCceeecCC-CCchHHHHHhhhhhcCCCceeEeeccc
Q 025622 139 GPRAIGFFGTRN--MGFMHQELIEILSYALVITKNHIYTSGA-SGTNAAVIRGALRAERPDLLTVILPQS 205 (250)
Q Consensus 139 g~rrIa~lGsRh--v~~~hq~LIEllsyAlvl~gn~i~TSGA-~GtNaAvIRGalrae~P~lLTViLPQS 205 (250)
..++||++|||+ ..=-..+..+-+.+.|+..|..|+|=|+ .|.=.|+-|||+.+ .-.-+ -|||+.
T Consensus 12 ~~~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lVsGGg~~Gim~aa~~gAl~~-gG~ti-gVlP~~ 79 (176)
T 2iz6_A 12 RKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEA-GGTTI-GVLPGP 79 (176)
T ss_dssp CCCEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHHHHHHHHHT-TCCEE-EEECC-
T ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHhHHHHHHHHHc-CCEEE-EEeCch
Confidence 457899999999 6667788999999999999999999999 99999999999998 43333 357876
No 3
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=97.18 E-value=0.00064 Score=57.34 Aligned_cols=69 Identities=22% Similarity=0.195 Sum_probs=55.4
Q ss_pred cCCceEEEe-cccccch-hHHHHHHHHHHHHHHhCCceeecCCC-CchHHHHHhhhhhcCCCceeEeecccccC
Q 025622 138 QGPRAIGFF-GTRNMGF-MHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLKK 208 (250)
Q Consensus 138 ~g~rrIa~l-GsRhv~~-~hq~LIEllsyAlvl~gn~i~TSGA~-GtNaAvIRGalrae~P~lLTViLPQSL~k 208 (250)
..-++||++ |||+..= -..+..+-+.+.|+..|..|+|-||. |.=.|+-|||+.+. -.- .=|||..+..
T Consensus 11 ~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~~GiM~aa~~gAl~~G-G~t-iGVlP~~~~~ 82 (215)
T 2a33_A 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGG-RHV-IGIIPKTLMP 82 (215)
T ss_dssp CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTT-CCE-EEEEESSCC-
T ss_pred CCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCChhhHhHHHHHHHHHcC-CcE-EEEcchHhcc
Confidence 345689999 9999643 35788999999999999999999996 99999999999983 333 3347887754
No 4
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=97.17 E-value=0.0012 Score=55.63 Aligned_cols=65 Identities=25% Similarity=0.214 Sum_probs=55.1
Q ss_pred HHhcCCceEEEecccccch--hHHHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhhcCCCceeE
Q 025622 135 IQQQGPRAIGFFGTRNMGF--MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTV 200 (250)
Q Consensus 135 IQq~g~rrIa~lGsRhv~~--~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~P~lLTV 200 (250)
++.-|.+.||++|+|+.+- -+.+..+-+.+.|+..|..|+|=||.|.=.||-|||+.+ .-.-+-|
T Consensus 32 l~~~~~~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVsGGg~GiM~aa~~gAl~~-gG~~iGV 98 (217)
T 1wek_A 32 LSELQVPLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVTGGGPGVMEAVNRGAYEA-GGVSVGL 98 (217)
T ss_dssp HHHCCSCEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEECSCSHHHHHHHHHHHHT-TCCEEEE
T ss_pred HhhcCCCEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChhhHHHHHHHHHHHc-CCCEEEE
Confidence 4555656899999999986 667899999999999999999999999999999999998 4333333
No 5
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=97.17 E-value=0.001 Score=54.72 Aligned_cols=65 Identities=14% Similarity=0.144 Sum_probs=54.8
Q ss_pred ceEEEecccccc--hhHHHHHHHHHHHHHHhCCceeecCCC-CchHHHHHhhhhhcCCCceeEeeccccc
Q 025622 141 RAIGFFGTRNMG--FMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLK 207 (250)
Q Consensus 141 rrIa~lGsRhv~--~~hq~LIEllsyAlvl~gn~i~TSGA~-GtNaAvIRGalrae~P~lLTViLPQSL~ 207 (250)
|+||++|+|+.+ =-+.+..+-+.+.|+..|..|+|-||. |.=.|+-|||+.+. - ...=|+|..|.
T Consensus 2 ~~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GGg~~GiM~aa~~gA~~~g-G-~~iGv~p~~l~ 69 (191)
T 1t35_A 2 KTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENG-G-TAIGVMPSGLF 69 (191)
T ss_dssp CEEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHHTTT-C-CEEEEEETTCC
T ss_pred CEEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECCCcccHHHHHHHHHHHcC-C-eEEEEeCchhc
Confidence 689999999974 457788899999999999999999997 99999999999983 3 34446788776
No 6
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=97.15 E-value=0.00063 Score=54.98 Aligned_cols=62 Identities=13% Similarity=0.032 Sum_probs=53.3
Q ss_pred ceEEEecccccch--hHHHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhhcCCCceeEeecc
Q 025622 141 RAIGFFGTRNMGF--MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQ 204 (250)
Q Consensus 141 rrIa~lGsRhv~~--~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~P~lLTViLPQ 204 (250)
++||++|+|+.+- -+.+..+-+.+.|+..|..|+|=|+.|.=.||-|||+.+.. . ..=|+|.
T Consensus 2 ~~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Ggg~GiM~aa~~gAl~~gG-~-tiGV~~~ 65 (171)
T 1weh_A 2 RLLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGGYQGGMEALARGVKAKGG-L-VVGVTAP 65 (171)
T ss_dssp EEEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECCSSTHHHHHHHHHHHTTC-C-EEECCCG
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChhhHHHHHHHHHHHcCC-c-EEEEecc
Confidence 5799999999987 67889999999999999999999999999999999999833 2 3334465
No 7
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=97.11 E-value=0.0016 Score=54.77 Aligned_cols=68 Identities=13% Similarity=0.131 Sum_probs=56.3
Q ss_pred cCCceEEEe-cccccchhHHHHHHHHHHHHHHhCCceeecCCC-CchHHHHHhhhhhcCCCceeEeeccccc
Q 025622 138 QGPRAIGFF-GTRNMGFMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLK 207 (250)
Q Consensus 138 ~g~rrIa~l-GsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~-GtNaAvIRGalrae~P~lLTViLPQSL~ 207 (250)
.+.++||++ |+|...--+.+..+-+.+.|+..|+.|+|-|+. |.=.||-|||+++. -...-|+|+.|.
T Consensus 20 ~~~~~v~Vfggs~~~~~~~~~~A~~lg~~La~~g~~lV~GGG~~GlM~a~~~gA~~~G--G~viGv~p~~l~ 89 (199)
T 3qua_A 20 DRQWAVCVYCASGPTHPELLELAAEVGSSIAARGWTLVSGGGNVSAMGAVAQAARAKG--GHTVGVIPKALV 89 (199)
T ss_dssp -CCCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHHTT--CCEEEEEEGGGT
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcC--CcEEEEeCchhh
Confidence 667899999 578666677888999999999999999999986 99999999999883 244557888774
No 8
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=96.90 E-value=0.0027 Score=53.09 Aligned_cols=63 Identities=17% Similarity=0.207 Sum_probs=52.4
Q ss_pred CceEEEeccccc-ch----hHHHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhhcCCCceeEeecc
Q 025622 140 PRAIGFFGTRNM-GF----MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQ 204 (250)
Q Consensus 140 ~rrIa~lGsRhv-~~----~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~P~lLTViLPQ 204 (250)
.++||++|+|+. .= -..+..+-|.+.|+..|..|+|-|+.|.=.||-|||+.+. -. ..-|||.
T Consensus 23 m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVsGg~~GiM~aa~~gAl~~G-G~-~iGVlP~ 90 (195)
T 1rcu_A 23 MKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFNGGRDGVMELVSQGVREAG-GT-VVGILPD 90 (195)
T ss_dssp CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEECCSSHHHHHHHHHHHHTT-CC-EEEEEST
T ss_pred CCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHHHcC-Cc-EEEEeCC
Confidence 468999999875 22 5678889999999999999999999999999999999983 33 4445787
No 9
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=96.88 E-value=0.0032 Score=56.04 Aligned_cols=79 Identities=18% Similarity=0.219 Sum_probs=63.9
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHHhCCceeecC-CCCchHHHHHhhhhhcCCCceeEeecccccCC-ChhHHHHH
Q 025622 140 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG-ASGTNAAVIRGALRAERPDLLTVILPQSLKKQ-PPESQELL 217 (250)
Q Consensus 140 ~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSG-A~GtNaAvIRGalrae~P~lLTViLPQSL~kQ-p~Es~elL 217 (250)
.+.|||.|||+..---.+..+-++..|+ .| ..++|| |-|+-+++-||||.+..+ --.||+..|++- |++.+++.
T Consensus 106 ~~~vaIVGsR~~s~yg~~~a~~l~~~La-~~-~~VVSGlA~GID~~AH~~aL~~~g~--TIaVl~~Gld~~YP~~n~~L~ 181 (288)
T 3uqz_A 106 FPKVAVVGSRACSKQGAKSVEKVIQGLE-NE-LVIVSGLAKGIDTAAHMAALQNGGK--TIAVIGTGLDVFYPKANKRLQ 181 (288)
T ss_dssp SCEEEEEECTTCCHHHHHHHHHHHHTTT-TC-SEEEECCCTTHHHHHHHHHHHHTCC--EEEECSSCTTCCSSGGGHHHH
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHHHh-hh-heEecCcccCHHHHHHHHHHhcCCC--EEEEecccccccCchhhHHHH
Confidence 3689999999999999999999999885 44 667777 689999999999998432 234799999874 77888887
Q ss_pred HHHhh
Q 025622 218 AKVKT 222 (250)
Q Consensus 218 e~V~~ 222 (250)
+++.+
T Consensus 182 ~~i~~ 186 (288)
T 3uqz_A 182 DYIGN 186 (288)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 76654
No 10
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=96.56 E-value=0.0086 Score=49.97 Aligned_cols=70 Identities=14% Similarity=0.109 Sum_probs=53.5
Q ss_pred HhcCCceEEEecc-cccchhHHHHHHHHHHHHHHhCCceeecCCC-CchHHHHHhhhhhcCCCceeEeeccccc
Q 025622 136 QQQGPRAIGFFGT-RNMGFMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLK 207 (250)
Q Consensus 136 Qq~g~rrIa~lGs-Rhv~~~hq~LIEllsyAlvl~gn~i~TSGA~-GtNaAvIRGalrae~P~lLTViLPQSL~ 207 (250)
-.+|.++||++|+ |...=-+.+.-+-+.+.|+..|+.|+|-|+. |.=.||-|||+.+. - ...=|+|+.|.
T Consensus 9 ~~~~~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~GGG~~GlM~a~~~ga~~~G-G-~viGv~p~~l~ 80 (189)
T 3sbx_A 9 DEPGRWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAVSSAARAHG-G-WTVGVIPKMLV 80 (189)
T ss_dssp ----CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHTTT-C-CEEEEEETTTT
T ss_pred CCCCCeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcC-C-cEEEEcCchhh
Confidence 3567899999985 5344455678888999999999999999987 99999999999883 2 34456788764
No 11
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=96.52 E-value=0.0066 Score=51.27 Aligned_cols=66 Identities=23% Similarity=0.237 Sum_probs=52.6
Q ss_pred CCceEEEe-cccccc-hhHHHHHHHHHHHHHHhCCceeecCCC-CchHHHHHhhhhhcCCCceeEeecccc
Q 025622 139 GPRAIGFF-GTRNMG-FMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSL 206 (250)
Q Consensus 139 g~rrIa~l-GsRhv~-~~hq~LIEllsyAlvl~gn~i~TSGA~-GtNaAvIRGalrae~P~lLTViLPQSL 206 (250)
.-++||++ |+|... =-+.+.-+-+.+.|+..|..|+|-|+. |.=.||-|||+++.. ...=|+|+.+
T Consensus 8 ~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~~GlM~aa~~gA~~~GG--~~iGv~p~~l 76 (216)
T 1ydh_A 8 RFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGL--HVLGIIPKAL 76 (216)
T ss_dssp SCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTC--CEEEEEEGGG
T ss_pred CCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCcccHhHHHHHHHHHcCC--cEEEEechhc
Confidence 34689999 678753 456778888999999999999999997 999999999999833 3444567654
No 12
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=93.52 E-value=0.25 Score=47.22 Aligned_cols=69 Identities=14% Similarity=0.197 Sum_probs=55.6
Q ss_pred hcCCceEEEecccccchhHHHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhhc------CCCceeEeecccc
Q 025622 137 QQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAE------RPDLLTVILPQSL 206 (250)
Q Consensus 137 q~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae------~P~lLTViLPQSL 206 (250)
...++.+.++||....=-+-+..+-+.++|+..|+.|+|-|+.|.=-|+.+||..+. .-..+-| +|+.|
T Consensus 144 ~r~~~IvV~cGSs~~~p~yye~A~eLGr~LA~~G~~LVtGGG~GLMeAa~aGA~~a~a~qr~aGG~vIGI-iP~~L 218 (462)
T 3gh1_A 144 GATPNLVVCWGGHSINEVEYQYTREVGHELGLRELNICTGCGPGAMEGPMKGAAVGHAKQRYSEYRYLGL-TEPSI 218 (462)
T ss_dssp TCCSCEEEEECCSSCCHHHHHHHHHHHHHHHHTTCEEEECCSSGGGTHHHHHHHHHHHHTTCTTCCEEEE-ECTTT
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcHHHHHHHHHHHHHhccccccCCCeEEEE-ccchh
Confidence 356666779999887778888999999999999999999999999999999998873 3334444 46654
No 13
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=93.37 E-value=0.43 Score=38.94 Aligned_cols=82 Identities=18% Similarity=0.177 Sum_probs=55.8
Q ss_pred ceEEEecccccch------------hHHHHHHHHHHHHHHhC-CceeecCCCCchHHHHHhhhhh--cCC-CceeEeecc
Q 025622 141 RAIGFFGTRNMGF------------MHQELIEILSYALVITK-NHIYTSGASGTNAAVIRGALRA--ERP-DLLTVILPQ 204 (250)
Q Consensus 141 rrIa~lGsRhv~~------------~hq~LIEllsyAlvl~g-n~i~TSGA~GtNaAvIRGalra--e~P-~lLTViLPQ 204 (250)
++|||-|-|..++ +-..|-+.|...+ -.| -+++|+||.|+=..+..-|+.. +-| =.|+||+|=
T Consensus 3 ~~i~vTGhR~~~l~if~~~~~~~~~ik~~L~~~l~~l~-~~G~~~~isgga~G~D~~aae~vl~lk~~y~~i~L~~v~Pf 81 (181)
T 2nx2_A 3 KVLAITGYKPFELGIFKQDDKALYYIKKAIKNRLIAFL-DEGLEWILISGQLGVELWAAEAAYDLQEEYPDLKVAVITPF 81 (181)
T ss_dssp CEEEEEECCHHHHTCCSSCCHHHHHHHHHHHHHHHHHH-TTTCCEEEECCCTTHHHHHHHHHHTTTTTCTTCEEEEEESS
T ss_pred eEEEEEeCCCccccCccccchHHHHHHHHHHHHHHHHH-hCCCcEEEECCCccHHHHHHHHHHHhccccCCceEEEEecc
Confidence 6899999998873 2333333333333 345 6999999999999998888773 346 468999993
Q ss_pred ccc--CCChhHHHHHHHHhhh
Q 025622 205 SLK--KQPPESQELLAKVKTV 223 (250)
Q Consensus 205 SL~--kQp~Es~elLe~V~~l 223 (250)
.=- +=+++.|+.+..++..
T Consensus 82 ~~~~~~w~~~~~~~y~~ll~~ 102 (181)
T 2nx2_A 82 YEQEKNWKEPNKEQYEAVLAQ 102 (181)
T ss_dssp BCTTTTSCHHHHHHHHHHHHH
T ss_pred cchhhCCCHHHHHHHHHHHHh
Confidence 322 2267777777766543
No 14
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=92.70 E-value=0.43 Score=45.44 Aligned_cols=69 Identities=14% Similarity=0.240 Sum_probs=52.5
Q ss_pred cCCceEEEecccccchhHHHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhh------cCCCceeEeeccccc
Q 025622 138 QGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRA------ERPDLLTVILPQSLK 207 (250)
Q Consensus 138 ~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalra------e~P~lLTViLPQSL~ 207 (250)
..++.++++|+....=-.-+..+-+.+.|+..|..|+|-|+.|.=-|+++||..+ ..-..+= |+|+.|.
T Consensus 143 ~~~~ivVv~GSs~~~~~~Ye~A~eLGr~LA~~G~~LVtGGG~GlMEaa~aGA~~a~s~qr~~GG~vIG-IiP~~L~ 217 (460)
T 3bq9_A 143 EEPNMVVCWGGHSINEIEYKYTKDVGYHIGLRGLNICTGCGPGAMKGPMKGATIGHAKQRVEGGRYLG-LTEPGII 217 (460)
T ss_dssp CCSCEEEEECCSSCCHHHHHHHHHHHHHHHHTTCEEEECCSSGGGTHHHHHHHHHHHHTTCSSCCEEE-EECTTTT
T ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHHHHCCCEEEeCCcHHHhhHHHhhHHhhcccccCCCCEEEE-EeChhhh
Confidence 4456788999977654445788889999999999999999999998888998877 2333444 4566643
No 15
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=64.70 E-value=20 Score=30.16 Aligned_cols=75 Identities=17% Similarity=0.040 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccCCChhHHHHHHHH-hhhhcCCCCC
Q 025622 154 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAKV-KTVIEKPHND 230 (250)
Q Consensus 154 ~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~P~lLTViLPQSL~kQp~Es~elLe~V-~~lvE~penD 230 (250)
--..+..++..|....-.+|+|+|++.-|.+.-=.+.-+..-=..+|++|... +|++-.++++.. .+|+.-+.++
T Consensus 54 K~R~~~~~i~~a~~~G~~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~--~~~~k~~~~~~~GA~v~~~~~~~ 129 (325)
T 1j0a_A 54 KIRKLEYLLGDALSKGADVVITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKE--ELKGNYLLDKIMGIETRVYDAKD 129 (325)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCTTCHHHHHHHHHHHHTTCEEEEEEESCC--CSCHHHHHHHHTTCEEEEESCCS
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCCcchHHHHHHHHHHHHhCCcEEEEECCCC--CCCchHHHHHHCCCEEEEeCcch
Confidence 34455566777777766789999865555543333333324446789999977 566666666543 2344444443
No 16
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=64.07 E-value=11 Score=32.32 Aligned_cols=52 Identities=21% Similarity=0.248 Sum_probs=36.9
Q ss_pred HHhhhhhcCCCceeEeecccccCCChhHHHHHHHHhhh-hcCCCCCCCChHHHhhhh
Q 025622 186 IRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKTV-IEKPHNDHLPLIEASRYT 241 (250)
Q Consensus 186 IRGalrae~P~lLTViLPQSL~kQp~Es~elLe~V~~l-vE~penD~LpL~eAS~lC 241 (250)
.+-.|..+++|.+.|..|-.+-. +-..+.|+.=+|| +|||=- +.+.||.+|.
T Consensus 88 ~~~ll~~~~vD~V~I~tp~~~H~--~~~~~al~aGkhVl~EKP~a--~~~~ea~~l~ 140 (412)
T 4gqa_A 88 WRELVNDPQVDVVDITSPNHLHY--TMAMAAIAAGKHVYCEKPLA--VNEQQAQEMA 140 (412)
T ss_dssp HHHHHHCTTCCEEEECSCGGGHH--HHHHHHHHTTCEEEEESCSC--SSHHHHHHHH
T ss_pred HHHHhcCCCCCEEEECCCcHHHH--HHHHHHHHcCCCeEeecCCc--CCHHHHHHHH
Confidence 45567777899999999977653 4456667776775 899964 4677776654
No 17
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=62.91 E-value=62 Score=26.67 Aligned_cols=69 Identities=10% Similarity=-0.025 Sum_probs=49.8
Q ss_pred hHHHHHHHHHhcCCceEEEecccccchhH-HHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhhcCCCcee
Q 025622 127 DYLQELLAIQQQGPRAIGFFGTRNMGFMH-QELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLT 199 (250)
Q Consensus 127 D~lqELaaIQq~g~rrIa~lGsRhv~~~h-q~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~P~lLT 199 (250)
++++++..+.+.|.+.|.|.|.. -|.++ ..+.|++.+.-.. |-+|-||++. .+-..++-..++ ..+.+.
T Consensus 88 ei~~~i~~~~~~g~~~i~~~gGe-~p~~~~~~~~~li~~i~~~-~~~i~~s~g~-l~~e~l~~L~~a-g~~~v~ 157 (348)
T 3iix_A 88 EIVERARLAVQFGAKTIVLQSGE-DPYXMPDVISDIVKEIKKM-GVAVTLSLGE-WPREYYEKWKEA-GADRYL 157 (348)
T ss_dssp HHHHHHHHHHHTTCSEEEEEESC-CGGGTTHHHHHHHHHHHTT-SCEEEEECCC-CCHHHHHHHHHH-TCCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEeCC-CCCccHHHHHHHHHHHHhc-CceEEEecCC-CCHHHHHHHHHh-CCCEEe
Confidence 38888888999999999998877 46777 8899999887665 6677766543 455666655555 444443
No 18
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=61.61 E-value=11 Score=32.37 Aligned_cols=48 Identities=17% Similarity=0.179 Sum_probs=33.6
Q ss_pred CCceEEEecccccchhHHHHHHHHHHHHHHhCCceee---cCCCCchHHHHHhhhhh
Q 025622 139 GPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYT---SGASGTNAAVIRGALRA 192 (250)
Q Consensus 139 g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~T---SGA~GtNaAvIRGalra 192 (250)
.++.|-|+|||.-. |.+|+-.+ ..+|.+-++ -|++=||-..|+..++.
T Consensus 63 ~~~~iLfVgTk~~~---~~~V~~~A---~~~g~~yv~~rWlgG~LTN~~ti~~~i~~ 113 (231)
T 3bbn_B 63 RGKQFLIVGTKNKA---ADSVARAA---IRARCHYVNKKWLGGMLTNWSTTETRLHK 113 (231)
T ss_dssp TTCCEEEECCCTTT---HHHHHHHH---HHHTCEECCSSCCSCSSSCHHHHHHHHHH
T ss_pred CCCEEEEEeCcHHH---HHHHHHHH---HHhCCccccccccCCCCcCHHHHHHHHHH
Confidence 56789999999853 66654433 345655554 38999999999876554
No 19
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=56.87 E-value=5.1 Score=32.53 Aligned_cols=25 Identities=8% Similarity=0.211 Sum_probs=16.3
Q ss_pred hhcCCCCCC---CC---hHHHhhhhhhhhhc
Q 025622 223 VIEKPHNDH---LP---LIEASRYTISFAFF 247 (250)
Q Consensus 223 lvE~penD~---Lp---L~eAS~lCns~~~~ 247 (250)
+++.|+|-. +| +.+-..+|...-.+
T Consensus 184 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 214 (407)
T 3nra_A 184 LFSNPNNPAGVVYSAEEIGQIAALAARYGAT 214 (407)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCE
T ss_pred EEcCCCCCCCcccCHHHHHHHHHHHHHcCCE
Confidence 467776643 67 77778888765443
No 20
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=54.69 E-value=8.2 Score=31.72 Aligned_cols=103 Identities=23% Similarity=0.236 Sum_probs=56.7
Q ss_pred hhHHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHh-----------------------C-CceeecCCCCc
Q 025622 126 VDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVIT-----------------------K-NHIYTSGASGT 181 (250)
Q Consensus 126 vD~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~-----------------------g-n~i~TSGA~Gt 181 (250)
+|+.-|-.-|+.--|=||||+|.-.++-.|..-+.-+...+... | -+.||+
T Consensus 11 ~~~~~~~~~~~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d----- 85 (393)
T 4fb5_A 11 VDLGTENLYFQSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATAD----- 85 (393)
T ss_dssp -------------CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESC-----
T ss_pred cccCccCccccCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCC-----
Confidence 45666666677766779999999888877755433222211110 1 122222
Q ss_pred hHHHHHhhhhhcCCCceeEeecccccCCChhHHHHHHHHhh-hhcCCCCCCCChHHHhhhh
Q 025622 182 NAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKT-VIEKPHNDHLPLIEASRYT 241 (250)
Q Consensus 182 NaAvIRGalrae~P~lLTViLPQSL~kQp~Es~elLe~V~~-lvE~penD~LpL~eAS~lC 241 (250)
.+-.|..+++|.+.|..|-.+-. +-..+.|+.=+| ++|||=- +.+.||.++.
T Consensus 86 ----~~ell~~~~iDaV~IatP~~~H~--~~a~~al~aGkhVl~EKPla--~~~~ea~~l~ 138 (393)
T 4fb5_A 86 ----WRALIADPEVDVVSVTTPNQFHA--EMAIAALEAGKHVWCEKPMA--PAYADAERML 138 (393)
T ss_dssp ----HHHHHHCTTCCEEEECSCGGGHH--HHHHHHHHTTCEEEECSCSC--SSHHHHHHHH
T ss_pred ----HHHHhcCCCCcEEEECCChHHHH--HHHHHHHhcCCeEEEccCCc--ccHHHHHHhh
Confidence 45566777899999999987643 335666777777 4799964 5677777664
No 21
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=54.56 E-value=1.1e+02 Score=26.79 Aligned_cols=115 Identities=17% Similarity=0.203 Sum_probs=67.2
Q ss_pred hcccceeeecccccCCChh--HHHHHHH-HHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhCCc---eeecCCCC
Q 025622 109 VEGSGAVMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNH---IYTSGASG 180 (250)
Q Consensus 109 v~g~~~v~~~~~~~~p~vD--~lqELaa-IQq~g~rrIa~lGsR--hv~~~hq~LIEllsyAlvl~gn~---i~TSGA~G 180 (250)
.+|.-...+.++..--++| -+++|.. +-+.|-.-|.++||- -.-..+.+-.+++..+.-..+.+ |+-.|+..
T Consensus 32 ~~Gv~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~s 111 (343)
T 2v9d_A 32 FTGIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTN 111 (343)
T ss_dssp SCEECCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSC
T ss_pred cCCeEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 5777777777776433455 4555555 446899999999984 45566666667766666554443 34455555
Q ss_pred chHHH--HHhhhhhcCCCceeEeecccccCCChhHHHHHHHHhhhh
Q 025622 181 TNAAV--IRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKTVI 224 (250)
Q Consensus 181 tNaAv--IRGalrae~P~lLTViLPQSL~kQp~Es~elLe~V~~lv 224 (250)
|..++ .|-|-++ ..+-+-|+-|--.+--..+..+-.+.|..-+
T Consensus 112 t~eai~la~~A~~~-Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~ 156 (343)
T 2v9d_A 112 ARETIELSQHAQQA-GADGIVVINPYYWKVSEANLIRYFEQVADSV 156 (343)
T ss_dssp HHHHHHHHHHHHHH-TCSEEEEECCSSSCCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhc-CCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 55544 3444444 6777777766544322223333334444433
No 22
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=52.43 E-value=8.2 Score=31.55 Aligned_cols=24 Identities=13% Similarity=0.012 Sum_probs=16.1
Q ss_pred hCCceeecCCCCchHHHHHhhhhh
Q 025622 169 TKNHIYTSGASGTNAAVIRGALRA 192 (250)
Q Consensus 169 ~gn~i~TSGA~GtNaAvIRGalra 192 (250)
..+-++|+|++..+.+++++.++.
T Consensus 98 ~~~i~~t~G~t~al~~~~~~l~~~ 121 (417)
T 3g7q_A 98 PQNIALTNGSQSAFFYLFNLFAGR 121 (417)
T ss_dssp GGGEEEESCHHHHHHHHHHHHSBC
T ss_pred cccEEEeCCcHHHHHHHHHHHcCC
Confidence 356677777777777777776544
No 23
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=51.12 E-value=35 Score=28.38 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=31.9
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHhC
Q 025622 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK 170 (250)
Q Consensus 128 ~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~g 170 (250)
+.+.+..+.+.|.+.|.|.|. =|++|..++|++.++-...+
T Consensus 55 i~~~i~~~~~~g~~~i~~tGG--EPll~~~l~~li~~~~~~~~ 95 (340)
T 1tv8_A 55 MARIAKVYAELGVKKIRITGG--EPLMRRDLDVLIAKLNQIDG 95 (340)
T ss_dssp HHHHHHHHHHTTCCEEEEESS--CGGGSTTHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHCCCCEEEEeCC--CccchhhHHHHHHHHHhCCC
Confidence 555555666789999999984 58999999999998776544
No 24
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=50.72 E-value=22 Score=32.54 Aligned_cols=54 Identities=26% Similarity=0.318 Sum_probs=0.0
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCcCCCCCCCccccccCCCCccccccccccccccccccccc
Q 025622 7 MRLLLPLSSVSTTNATTPFFNSIDFPSKFLKSPNPNFNFFASSSHPTQHSWRARRTKKTWLCGNMRK 73 (250)
Q Consensus 7 mrLLLPLtt~~is~~~tP~~~~~~~~~~~~~S~NPNFn~~~Sss~psQsq~~~rRsR~twl~~~~~~ 73 (250)
+-||=||++++.++...|++.+-.|...+|.+. + -|.....+++-||=.|.+..
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~ 94 (430)
T 4aec_A 41 ALLLNPLTSSSSSSTLRRFRCSPEISSLSFSSA------------S-DFSLAMKRQSRSFADGSERD 94 (430)
T ss_dssp -------------------------------------------------------------------
T ss_pred hhhcCCCCCchhhhhccccccchhhccCccccc------------c-chhhcccCccceeecCCCCC
Confidence 337888888777766777544433333333211 2 25555566777888777543
No 25
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=50.69 E-value=16 Score=29.97 Aligned_cols=51 Identities=24% Similarity=0.213 Sum_probs=36.1
Q ss_pred HHhhhhhcCCCceeEeecccccCCChhHHHHHHHHhh-hhcCCCCCCCChHHHhhh
Q 025622 186 IRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKT-VIEKPHNDHLPLIEASRY 240 (250)
Q Consensus 186 IRGalrae~P~lLTViLPQSL~kQp~Es~elLe~V~~-lvE~penD~LpL~eAS~l 240 (250)
.+-.|..++.|.+.|..|-.+-. +-..+.|+.=+| ++|||=- +.+.||.+|
T Consensus 67 ~~~ll~~~~iDaV~I~tP~~~H~--~~~~~al~aGkhVl~EKPla--~t~~ea~~l 118 (390)
T 4h3v_A 67 WRTLLERDDVQLVDVCTPGDSHA--EIAIAALEAGKHVLCEKPLA--NTVAEAEAM 118 (390)
T ss_dssp HHHHTTCTTCSEEEECSCGGGHH--HHHHHHHHTTCEEEEESSSC--SSHHHHHHH
T ss_pred HHHHhcCCCCCEEEEeCChHHHH--HHHHHHHHcCCCceeecCcc--cchhHHHHH
Confidence 45567777889999999987643 334556666566 5899964 567888777
No 26
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=50.47 E-value=7 Score=31.89 Aligned_cols=23 Identities=13% Similarity=0.131 Sum_probs=14.0
Q ss_pred hhcCCCCCC---CC---hHHHhhhhhhhh
Q 025622 223 VIEKPHNDH---LP---LIEASRYTISFA 245 (250)
Q Consensus 223 lvE~penD~---Lp---L~eAS~lCns~~ 245 (250)
+++.|+|-. +| +.+-..+|...-
T Consensus 166 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~ 194 (391)
T 3h14_A 166 MVASPANPTGTMLDHAAMGALIEAAQAQG 194 (391)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTT
T ss_pred EECCCCCCCCccCCHHHHHHHHHHHHHcC
Confidence 567776643 56 556666776543
No 27
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=47.73 E-value=12 Score=30.05 Aligned_cols=23 Identities=17% Similarity=0.302 Sum_probs=12.2
Q ss_pred hhcCCCCC---CCChHHHhh---hhhhhh
Q 025622 223 VIEKPHND---HLPLIEASR---YTISFA 245 (250)
Q Consensus 223 lvE~penD---~LpL~eAS~---lCns~~ 245 (250)
+|+.|+|- -+|..+-.+ +|...-
T Consensus 161 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~ 189 (383)
T 3kax_A 161 LLCSPHNPIGRVWKKEELTKLGSLCTKYN 189 (383)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHHT
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHCC
Confidence 46777663 356444444 476543
No 28
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=47.69 E-value=8.7 Score=30.70 Aligned_cols=25 Identities=16% Similarity=0.093 Sum_probs=15.9
Q ss_pred hcCCC---CCCCChHHHhhhhhhhhhcc
Q 025622 224 IEKPH---NDHLPLIEASRYTISFAFFL 248 (250)
Q Consensus 224 vE~pe---nD~LpL~eAS~lCns~~~~~ 248 (250)
++.|+ ..-.|+.+-..+|.....++
T Consensus 152 ~~~~~nptG~~~~l~~i~~l~~~~~~~l 179 (386)
T 2dr1_A 152 ITYNETSTGVLNPLPELAKVAKEHDKLV 179 (386)
T ss_dssp EESEETTTTEECCHHHHHHHHHHTTCEE
T ss_pred EEeecCCcchhCCHHHHHHHHHHcCCeE
Confidence 34444 34578888888887654433
No 29
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=47.45 E-value=17 Score=29.19 Aligned_cols=20 Identities=20% Similarity=0.273 Sum_probs=10.9
Q ss_pred CceeecCCCCchHHHHHhhh
Q 025622 171 NHIYTSGASGTNAAVIRGAL 190 (250)
Q Consensus 171 n~i~TSGA~GtNaAvIRGal 190 (250)
+-++|+|++..+.+++++.+
T Consensus 87 ~i~~~~g~~~a~~~~~~~l~ 106 (391)
T 3dzz_A 87 WCVFASGVVPAISAMVRQFT 106 (391)
T ss_dssp GEEEESCHHHHHHHHHHHHS
T ss_pred HEEECCCHHHHHHHHHHHhC
Confidence 44555555555555555543
No 30
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=46.54 E-value=12 Score=30.05 Aligned_cols=23 Identities=17% Similarity=0.307 Sum_probs=12.3
Q ss_pred hhcCCCCC---CCC---hHHHhhhhhhhh
Q 025622 223 VIEKPHND---HLP---LIEASRYTISFA 245 (250)
Q Consensus 223 lvE~penD---~Lp---L~eAS~lCns~~ 245 (250)
+++.|+|- -+| +.+-..+|...-
T Consensus 169 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 197 (391)
T 4dq6_A 169 ILCNPHNPVGRVWTKDELKKLGDICLKHN 197 (391)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHTT
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcC
Confidence 46777663 233 445555676543
No 31
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=46.24 E-value=1.5e+02 Score=25.81 Aligned_cols=117 Identities=21% Similarity=0.244 Sum_probs=68.1
Q ss_pred hcccceeeecccccCCChh--HHHHHHH-HHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhCCc---eeecCCCC
Q 025622 109 VEGSGAVMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNH---IYTSGASG 180 (250)
Q Consensus 109 v~g~~~v~~~~~~~~p~vD--~lqELaa-IQq~g~rrIa~lGsR--hv~~~hq~LIEllsyAlvl~gn~---i~TSGA~G 180 (250)
.+|.-...+.++..-=++| -++.|.. +-+.|-.-|.++||- -.-..+.+-.+++..+.-..+.+ |+-.|+..
T Consensus 35 ~~Gv~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~s 114 (332)
T 2r8w_A 35 FKGLSAFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALR 114 (332)
T ss_dssp GCEEEECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSS
T ss_pred cCCeeEEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 5677666677776433355 4555555 446899999999984 44456666677776666555553 34455555
Q ss_pred chHHH--HHhhhhhcCCCceeEeecccccCCC-hhHHHHHHHHhhhhcCC
Q 025622 181 TNAAV--IRGALRAERPDLLTVILPQSLKKQP-PESQELLAKVKTVIEKP 227 (250)
Q Consensus 181 tNaAv--IRGalrae~P~lLTViLPQSL~kQp-~Es~elLe~V~~lvE~p 227 (250)
|.-|+ .|-|-++ ..+-+-|+-|- ..|-. .+..+-.+.|..-+..|
T Consensus 115 t~eai~la~~A~~~-Gadavlv~~P~-Y~~~s~~~l~~~f~~VA~a~~lP 162 (332)
T 2r8w_A 115 TDEAVALAKDAEAA-GADALLLAPVS-YTPLTQEEAYHHFAAVAGATALP 162 (332)
T ss_dssp HHHHHHHHHHHHHH-TCSEEEECCCC-SSCCCHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHhc-CCCEEEECCCC-CCCCCHHHHHHHHHHHHHhcCCC
Confidence 65554 4555555 67777776665 44422 23333334444433333
No 32
>1ug8_A Poly(A)-specific ribonuclease; R3H domain, poly(A)-specific 3'-exoribonuclease, PARN, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.68.7.1
Probab=45.36 E-value=4.8 Score=30.78 Aligned_cols=32 Identities=9% Similarity=0.303 Sum_probs=23.6
Q ss_pred ChhHHHHHHH----HhhhhcCCCCCCCChHHHhhhhhhhh
Q 025622 210 PPESQELLAK----VKTVIEKPHNDHLPLIEASRYTISFA 245 (250)
Q Consensus 210 p~Es~elLe~----V~~lvE~penD~LpL~eAS~lCns~~ 245 (250)
|+|.++++++ |.+.++.+++|.|-|+- ||+|-
T Consensus 6 p~e~k~~id~i~~kIe~FL~s~~~~~l~l~p----CN~f~ 41 (87)
T 1ug8_A 6 SGDQKKFIDQVIEKIEDFLQSEEKRSLELDP----CTGFQ 41 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSSCCEEECCC----CCSHH
T ss_pred ChHHHHHHHHHHHHHHHHHhCCCCCceecCC----chHHH
Confidence 5677777765 45677788988887765 99984
No 33
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=45.22 E-value=13 Score=29.62 Aligned_cols=22 Identities=9% Similarity=-0.103 Sum_probs=14.3
Q ss_pred hhcCCCC---CCCChHHHhhhhhhh
Q 025622 223 VIEKPHN---DHLPLIEASRYTISF 244 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~ 244 (250)
+++.|.| .-+|+.+-..+|...
T Consensus 142 ~~~~~~nptG~~~~l~~i~~~~~~~ 166 (385)
T 2bkw_A 142 TVTHVDTSTAVLSDLKAISQAIKQT 166 (385)
T ss_dssp EEESEETTTTEECCHHHHHHHHHHH
T ss_pred EEEccCCCcCeEcCHHHHHHHHHhh
Confidence 3455553 346788888888765
No 34
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=45.04 E-value=17 Score=29.21 Aligned_cols=43 Identities=5% Similarity=-0.093 Sum_probs=23.4
Q ss_pred HHHHHHHHHhc------CCceEEEecccccchhHHHHHHHHHHHHHHh--CCceeec
Q 025622 128 YLQELLAIQQQ------GPRAIGFFGTRNMGFMHQELIEILSYALVIT--KNHIYTS 176 (250)
Q Consensus 128 ~lqELaaIQq~------g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~--gn~i~TS 176 (250)
+-++++..-.. .+..|.|..+ -++.++++..++... |.+|++.
T Consensus 64 lr~~la~~l~~~~g~~~~~~~i~~t~g------~~~al~~~~~~~~~~~~gd~vl~~ 114 (376)
T 3ezs_A 64 LRAAQRGFFKRRFKIELKENELISTLG------SREVLFNFPSFVLFDYQNPTIAYP 114 (376)
T ss_dssp HHHHHHHHHHHHHSCCCCGGGEEEESS------SHHHHHHHHHHHTTTCSSCEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCHHHEEECcC------cHHHHHHHHHHHcCCCCCCEEEEe
Confidence 55666554321 3445544433 356667777776666 6666654
No 35
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=45.00 E-value=25 Score=28.58 Aligned_cols=36 Identities=8% Similarity=-0.057 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhh
Q 025622 154 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGAL 190 (250)
Q Consensus 154 ~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGal 190 (250)
.+.+|.|.++.-+- ..+-++|+|++..|.++|+.+.
T Consensus 79 ~~~~l~~~la~~~g-~~~v~~~~~gt~a~~~al~~~~ 114 (392)
T 3ruy_A 79 QLGPWYEKVAKLTN-KEMVLPMNTGAEAVETAIKTAR 114 (392)
T ss_dssp THHHHHHHHHHHHT-CSEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC-CCEEEEeCcHHHHHHHHHHHHH
Confidence 34555555554332 3456667777666666666443
No 36
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=44.87 E-value=15 Score=31.52 Aligned_cols=37 Identities=14% Similarity=0.054 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHh---CCceeecCCCCchHHHHHhhhh
Q 025622 155 HQELIEILSYALVIT---KNHIYTSGASGTNAAVIRGALR 191 (250)
Q Consensus 155 hq~LIEllsyAlvl~---gn~i~TSGA~GtNaAvIRGalr 191 (250)
.+.+.+.++..+-.. ++-++|+|++..|.++++.+.+
T Consensus 109 ~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~ 148 (497)
T 3mc6_A 109 ESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKM 148 (497)
T ss_dssp HHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHH
Confidence 344555555443333 5678899988888888887764
No 37
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=44.06 E-value=16 Score=29.18 Aligned_cols=22 Identities=18% Similarity=0.182 Sum_probs=14.9
Q ss_pred hhcCCCC---CCCChHHHhhhhhhh
Q 025622 223 VIEKPHN---DHLPLIEASRYTISF 244 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~ 244 (250)
+++.|+| .-+|+.+-.++|...
T Consensus 143 ~~~~~~nptG~~~~l~~i~~l~~~~ 167 (382)
T 4eb5_A 143 SVQHANNEIGTIQPVEEISEVLAGK 167 (382)
T ss_dssp ECCSBCTTTCBBCCHHHHHHHHTTS
T ss_pred EEeccCCCccccCCHHHHHHHHHHC
Confidence 4566664 457888888888654
No 38
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=44.04 E-value=12 Score=29.43 Aligned_cols=22 Identities=18% Similarity=0.182 Sum_probs=13.8
Q ss_pred hhcCCCC---CCCChHHHhhhhhhh
Q 025622 223 VIEKPHN---DHLPLIEASRYTISF 244 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~ 244 (250)
+++.|+| .-+|+.+-..+|...
T Consensus 143 ~~~~~~nptG~~~~~~~i~~l~~~~ 167 (382)
T 4hvk_A 143 SVQHANNEIGTIQPVEEISEVLAGK 167 (382)
T ss_dssp ECCSBCTTTCBBCCHHHHHHHHSSS
T ss_pred EEECCCCCceeeCCHHHHHHHHHHc
Confidence 3455554 346777777788654
No 39
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=43.43 E-value=25 Score=28.03 Aligned_cols=25 Identities=8% Similarity=0.049 Sum_probs=15.6
Q ss_pred hhcCCCC---CCCChHHHhhhhhhhhhc
Q 025622 223 VIEKPHN---DHLPLIEASRYTISFAFF 247 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~~~~ 247 (250)
+++.|+| .-+|+.+-..+|.....+
T Consensus 153 ~~~~~~nptG~~~~l~~i~~l~~~~~~~ 180 (393)
T 3kgw_A 153 FLVHGESSTGVVQPLDGFGELCHRYQCL 180 (393)
T ss_dssp EEESEETTTTEECCCTTHHHHHHHTTCE
T ss_pred EEeccCCcchhhccHHHHHHHHHHcCCE
Confidence 4555544 446777778888765443
No 40
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=43.40 E-value=12 Score=29.46 Aligned_cols=22 Identities=9% Similarity=-0.044 Sum_probs=14.2
Q ss_pred hhcCCCC---CCCChHHHhhhhhhh
Q 025622 223 VIEKPHN---DHLPLIEASRYTISF 244 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~ 244 (250)
+++.|+| .-+|+.+-..+|...
T Consensus 126 ~~~~~~nptG~~~~l~~i~~l~~~~ 150 (352)
T 1iug_A 126 LLVHSETSTGALADLPALARAFKEK 150 (352)
T ss_dssp EEESEETTTTEECCHHHHHHHHHHH
T ss_pred EEEEecCCcceecCHHHHHHHHHhh
Confidence 3455554 457788888888765
No 41
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=43.27 E-value=12 Score=30.23 Aligned_cols=26 Identities=15% Similarity=0.146 Sum_probs=16.4
Q ss_pred hhcCCCC---CCCChHHHhhhhhhhhhcc
Q 025622 223 VIEKPHN---DHLPLIEASRYTISFAFFL 248 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~~~~~ 248 (250)
+++.|+| .-+|+.+-..+|.....++
T Consensus 164 ~~~~~~nptG~~~~l~~i~~la~~~~~~l 192 (400)
T 3vax_A 164 SLMHVNNETGVIQPVAELAQQLRATPTYL 192 (400)
T ss_dssp ECCSBCTTTCBBCCHHHHHHHHTTSSCEE
T ss_pred EEECCCCCceeeCcHHHHHHHHHhcCCEE
Confidence 4555554 3567888888887654443
No 42
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=42.68 E-value=10 Score=33.57 Aligned_cols=18 Identities=50% Similarity=0.829 Sum_probs=13.4
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 025622 173 IYTSGA--SGTNAAVIRGALR 191 (250)
Q Consensus 173 i~TSGA--~GtNaAvIRGalr 191 (250)
|+|||+ .|.||+ |||+.|
T Consensus 6 IltsGG~~pG~Na~-ir~vv~ 25 (319)
T 4a3s_A 6 VLTSGGDSPGMNAA-VRAVVR 25 (319)
T ss_dssp EEEESSCCTTHHHH-HHHHHH
T ss_pred EECcCCCcHHHHHH-HHHHHH
Confidence 789997 788975 566554
No 43
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=42.62 E-value=12 Score=29.43 Aligned_cols=23 Identities=13% Similarity=0.128 Sum_probs=14.2
Q ss_pred hhcCCCC---CCCC---hHHHhhhhhhhhh
Q 025622 223 VIEKPHN---DHLP---LIEASRYTISFAF 246 (250)
Q Consensus 223 lvE~pen---D~Lp---L~eAS~lCns~~~ 246 (250)
+++.| | .-+| +.+-..+|...-.
T Consensus 150 ~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~ 178 (359)
T 1svv_A 150 YISNT-TEVGTQYTKQELEDISASCKEHGL 178 (359)
T ss_dssp EEESS-CTTSCCCCHHHHHHHHHHHHHHTC
T ss_pred EEEcC-CCCceecCHHHHHHHHHHHHHhCC
Confidence 35666 4 4566 6667778875443
No 44
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=42.57 E-value=14 Score=29.86 Aligned_cols=26 Identities=8% Similarity=0.084 Sum_probs=17.1
Q ss_pred hhcCCCC---CCCChHHHhhhhhhhhhcc
Q 025622 223 VIEKPHN---DHLPLIEASRYTISFAFFL 248 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~~~~~ 248 (250)
+++.|.| .-+|+.+-.++|.....++
T Consensus 139 ~~~~~~nptG~~~~l~~i~~l~~~~~~~l 167 (392)
T 2z9v_A 139 SVCHHDTPSGTINPIDAIGALVSAHGAYL 167 (392)
T ss_dssp EEESEEGGGTEECCHHHHHHHHHHTTCEE
T ss_pred EEeccCCCCceeccHHHHHHHHHHcCCeE
Confidence 4555554 4578888888887654443
No 45
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=42.31 E-value=18 Score=31.51 Aligned_cols=39 Identities=13% Similarity=0.054 Sum_probs=27.9
Q ss_pred hHHHHHHHHHHHHHHh---CCc--eeecCCCCchHHHHHhhhhh
Q 025622 154 MHQELIEILSYALVIT---KNH--IYTSGASGTNAAVIRGALRA 192 (250)
Q Consensus 154 ~hq~LIEllsyAlvl~---gn~--i~TSGA~GtNaAvIRGalra 192 (250)
+.+.+.|.++.-+-.. .+- ++|+|++..|.++++.+.+.
T Consensus 140 le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~ 183 (514)
T 3mad_A 140 FEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDW 183 (514)
T ss_dssp HHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHH
Confidence 3445666666555444 466 99999999999999888654
No 46
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=41.11 E-value=14 Score=29.94 Aligned_cols=25 Identities=12% Similarity=0.214 Sum_probs=15.1
Q ss_pred hhcCCCCC---CCChHHHhhhhhhhhhc
Q 025622 223 VIEKPHND---HLPLIEASRYTISFAFF 247 (250)
Q Consensus 223 lvE~penD---~LpL~eAS~lCns~~~~ 247 (250)
+++.|+|- -+|+.+-.++|.....+
T Consensus 164 ~~~~~~nptG~~~~l~~i~~l~~~~~~~ 191 (393)
T 1vjo_A 164 ALVHAETSTGARQPLEGVGELCREFGTL 191 (393)
T ss_dssp EEESEETTTTEECCCTTHHHHHHHHTCE
T ss_pred EEeccCCCcceeccHHHHHHHHHHcCCE
Confidence 45655443 36777777888765433
No 47
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=40.55 E-value=21 Score=28.33 Aligned_cols=23 Identities=17% Similarity=0.169 Sum_probs=15.8
Q ss_pred hhcCCCC---CCCChHHHhhhhhhhh
Q 025622 223 VIEKPHN---DHLPLIEASRYTISFA 245 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~~ 245 (250)
+++.|.| .-+|+.+-..+|....
T Consensus 144 ~~~~~~nptG~~~~~~~i~~l~~~~~ 169 (384)
T 1eg5_A 144 SIMAANNEVGTIQPVEDVTRIVKKKN 169 (384)
T ss_dssp EEESBCTTTCBBCCHHHHHHHHHHHC
T ss_pred EEECCCCCcccccCHHHHHHHHHhcC
Confidence 4566654 4578888888887654
No 48
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=40.33 E-value=14 Score=30.08 Aligned_cols=22 Identities=18% Similarity=0.203 Sum_probs=13.9
Q ss_pred hcCCCC---CCCC---hHHHhhhhhhhh
Q 025622 224 IEKPHN---DHLP---LIEASRYTISFA 245 (250)
Q Consensus 224 vE~pen---D~Lp---L~eAS~lCns~~ 245 (250)
+..|+| .-+| +.+-..+|....
T Consensus 170 ~~~~~nptG~~~~~~~l~~i~~~~~~~~ 197 (399)
T 1c7n_A 170 FCSPHNPVGRVWKKDELQKIKDIVLKSD 197 (399)
T ss_dssp EESSBTTTTBCCCHHHHHHHHHHHHHSS
T ss_pred EcCCCCCCCcCcCHHHHHHHHHHHHHcC
Confidence 466655 3466 777778886543
No 49
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=40.22 E-value=33 Score=27.58 Aligned_cols=59 Identities=15% Similarity=0.238 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHhcCCceEEEecccccchhHHHHHHHHH------------------HHHHHhCCceeecCCCCchHHH
Q 025622 126 VDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILS------------------YALVITKNHIYTSGASGTNAAV 185 (250)
Q Consensus 126 vD~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIElls------------------yAlvl~gn~i~TSGA~GtNaAv 185 (250)
.|+++=|...++.+. +||++|-.|+..--..+-+++. ..+...|-.++--|+..++.|-
T Consensus 81 ~Dil~al~~a~~~~~-kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~~~~~A~ 157 (196)
T 2q5c_A 81 FDTMRAVYNAKRFGN-ELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGKTVTDEAI 157 (196)
T ss_dssp HHHHHHHHHHGGGCS-EEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECHHHHHHHH
T ss_pred hHHHHHHHHHHhhCC-cEEEEeCcchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCHHHHHHHH
Confidence 589999999999875 8999999999876666555543 2345567677666666666553
No 50
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=39.65 E-value=15 Score=29.64 Aligned_cols=91 Identities=10% Similarity=-0.048 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHhCCceeecC-CCCchHHHHHhhhhhcCCCceeEeecccccCCChhHHHHHHH--Hh-hhhcCCC---
Q 025622 156 QELIEILSYALVITKNHIYTSG-ASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAK--VK-TVIEKPH--- 228 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TSG-A~GtNaAvIRGalrae~P~lLTViLPQSL~kQp~Es~elLe~--V~-~lvE~pe--- 228 (250)
.+.++++..++...|..|+++- +-..+. ...+.+...-+...|=++....-.+.+-.+.+++ +. =+++.|+
T Consensus 80 t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~npt 157 (393)
T 2huf_A 80 HGGMEATLCNLLEDGDVILIGHTGHWGDR--SADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSST 157 (393)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTT
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCcchHH--HHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCc
Confidence 4566777777766676666543 221121 1111222122333332222111112223334433 11 0344444
Q ss_pred CCCCChHHHhhhhhhhhhcc
Q 025622 229 NDHLPLIEASRYTISFAFFL 248 (250)
Q Consensus 229 nD~LpL~eAS~lCns~~~~~ 248 (250)
..-.|+.+-..+|.....++
T Consensus 158 G~~~~l~~i~~~~~~~~~~l 177 (393)
T 2huf_A 158 GVLQGLEGVGALCHQHNCLL 177 (393)
T ss_dssp TEECCCTTHHHHHHHTTCEE
T ss_pred cccCCHHHHHHHHHHcCCEE
Confidence 44577888888887654433
No 51
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=39.08 E-value=25 Score=27.86 Aligned_cols=24 Identities=8% Similarity=-0.108 Sum_probs=15.4
Q ss_pred hcCCCC---CCCChHHHhhhhhhhhhc
Q 025622 224 IEKPHN---DHLPLIEASRYTISFAFF 247 (250)
Q Consensus 224 vE~pen---D~LpL~eAS~lCns~~~~ 247 (250)
++.|.| .-.|+.+-..+|...-.+
T Consensus 177 ~~~~~nptG~~~~l~~i~~l~~~~~~~ 203 (397)
T 3f9t_A 177 GIAGTTELGTIDNIEELSKIAKENNIY 203 (397)
T ss_dssp EEBSCTTTCCBCCHHHHHHHHHHHTCE
T ss_pred EECCCCCCCCCCCHHHHHHHHHHhCCe
Confidence 455554 456788888888765433
No 52
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=38.82 E-value=10 Score=30.55 Aligned_cols=38 Identities=24% Similarity=0.118 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHhC--Cc-eeecCCCCchHHHHHhhhhh
Q 025622 155 HQELIEILSYALVITK--NH-IYTSGASGTNAAVIRGALRA 192 (250)
Q Consensus 155 hq~LIEllsyAlvl~g--n~-i~TSGA~GtNaAvIRGalra 192 (250)
++++.|.++.-+-... +- ++|+||+..+.+++++.++.
T Consensus 51 ~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~ 91 (362)
T 2c0r_A 51 HNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKE 91 (362)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCC
Confidence 4455555554443333 32 46789999999999988754
No 53
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=37.81 E-value=26 Score=29.77 Aligned_cols=19 Identities=16% Similarity=-0.146 Sum_probs=13.4
Q ss_pred ceeecCCCCchHHHHHhhh
Q 025622 172 HIYTSGASGTNAAVIRGAL 190 (250)
Q Consensus 172 ~i~TSGA~GtNaAvIRGal 190 (250)
-++|+||+..|..+++++.
T Consensus 106 ~~~t~ggtea~~~al~a~~ 124 (452)
T 2dgk_A 106 GTNTIGSSEACMLGGMAMK 124 (452)
T ss_dssp EEEESSHHHHHHHHHHHHH
T ss_pred eEEeCCHHHHHHHHHHHHH
Confidence 4677777777777776664
No 54
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=37.53 E-value=17 Score=29.16 Aligned_cols=25 Identities=20% Similarity=0.121 Sum_probs=16.7
Q ss_pred hhcCCCC---CCCChHHHhhhhhhhhhc
Q 025622 223 VIEKPHN---DHLPLIEASRYTISFAFF 247 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~~~~ 247 (250)
+++.|.| .-+|+.+-..+|.....+
T Consensus 169 ~~~~~~nptG~~~~l~~i~~l~~~~~~~ 196 (406)
T 1kmj_A 169 AITHVSNVLGTENPLAEMITLAHQHGAK 196 (406)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHHHTTCE
T ss_pred EEeCCCccccCcCCHHHHHHHHHHcCCE
Confidence 4566664 457888888888765443
No 55
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=36.47 E-value=21 Score=28.74 Aligned_cols=112 Identities=12% Similarity=0.023 Sum_probs=51.6
Q ss_pred HHHHHHHHHhcCCc-eEEEecccccchhHHHHHHHHHHHHHHhCCceeec-CCCCchHHHHHhhhhhcCCCceeEeeccc
Q 025622 128 YLQELLAIQQQGPR-AIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS-GASGTNAAVIRGALRAERPDLLTVILPQS 205 (250)
Q Consensus 128 ~lqELaaIQq~g~r-rIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TS-GA~GtNaAvIRGalrae~P~lLTViLPQS 205 (250)
+.++|+..-...+. .|.+.++ -.+.++++..++...|..|++. .+-.... ...+.+...-+...|-++..
T Consensus 56 l~~~la~~~~~~~~~~v~~~~g------~t~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 127 (396)
T 2ch1_A 56 VKDGLRYIFQTENRATMCVSGS------AHAGMEAMLSNLLEEGDRVLIAVNGIWAER--AVEMSERYGADVRTIEGPPD 127 (396)
T ss_dssp HHHHHHHHHTCCCSCEEEESSC------HHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHhCCCCCcEEEECCc------HHHHHHHHHHHhcCCCCeEEEEcCCcccHH--HHHHHHHcCCceEEecCCCC
Confidence 44555555443333 4544332 3567788888877677666654 3322221 11122221223333333221
Q ss_pred ccCCChhHHHHHHH--Hhh-hhcCC---CCCCCChHHHhhhhhhhhhc
Q 025622 206 LKKQPPESQELLAK--VKT-VIEKP---HNDHLPLIEASRYTISFAFF 247 (250)
Q Consensus 206 L~kQp~Es~elLe~--V~~-lvE~p---enD~LpL~eAS~lCns~~~~ 247 (250)
..-.+.+..+.+++ +.- +++.| ...-+|+.+-..+|.....+
T Consensus 128 ~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~ 175 (396)
T 2ch1_A 128 RPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCL 175 (396)
T ss_dssp SCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCE
T ss_pred CCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCE
Confidence 11122333344433 111 34444 44457788888888765433
No 56
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=36.29 E-value=26 Score=27.25 Aligned_cols=50 Identities=12% Similarity=0.038 Sum_probs=30.7
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHH-hCCceeecCCCCch
Q 025622 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVI-TKNHIYTSGASGTN 182 (250)
Q Consensus 128 ~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 182 (250)
++.++ +++.|-..+. ...+|=-...|.|.+..|+.. .-.-|+|||++|..
T Consensus 25 ~l~~~--l~~~G~~v~~---~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 75 (164)
T 2is8_A 25 AIREV--LAGGPFEVAA---YELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLA 75 (164)
T ss_dssp HHHHH--HTTSSEEEEE---EEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred HHHHH--HHHCCCeEeE---EEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 55544 3455643221 123333456778888887764 46789999999975
No 57
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=36.17 E-value=13 Score=30.45 Aligned_cols=22 Identities=9% Similarity=0.111 Sum_probs=13.0
Q ss_pred hcCCCC---CCCChH---HHhhhhhhhh
Q 025622 224 IEKPHN---DHLPLI---EASRYTISFA 245 (250)
Q Consensus 224 vE~pen---D~LpL~---eAS~lCns~~ 245 (250)
++.|+| .-+|+. +-..+|...-
T Consensus 181 ~~~~~nptG~~~~~~~l~~i~~~~~~~~ 208 (407)
T 2zc0_A 181 IPTGQNPMGVTMSMERRKALLEIASKYD 208 (407)
T ss_dssp CCSSCTTTCCCCCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 455555 456665 6667776543
No 58
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=35.93 E-value=29 Score=30.38 Aligned_cols=37 Identities=22% Similarity=0.215 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHhC--Ccee-ecCCCCchHHHHHhhhhh
Q 025622 156 QELIEILSYALVITK--NHIY-TSGASGTNAAVIRGALRA 192 (250)
Q Consensus 156 q~LIEllsyAlvl~g--n~i~-TSGA~GtNaAvIRGalra 192 (250)
.+.-|.++.-+-... .-++ |||||..+.++|+|.++.
T Consensus 75 ~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~ 114 (386)
T 3qm2_A 75 EEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGD 114 (386)
T ss_dssp HHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCC
Confidence 344455555554332 2466 688888888888888765
No 59
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=35.79 E-value=28 Score=28.06 Aligned_cols=22 Identities=14% Similarity=0.244 Sum_probs=14.0
Q ss_pred hhcCCCC---CCCChHHHhhhhhhh
Q 025622 223 VIEKPHN---DHLPLIEASRYTISF 244 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~ 244 (250)
+++.|.| .-+|+.+-.++|...
T Consensus 154 ~i~~p~nptG~~~~~~~l~~l~~~~ 178 (360)
T 3hdo_A 154 FLTTPNAPLGPSFPLEYIDELARRC 178 (360)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHB
T ss_pred EEeCCCCCCCCCcCHHHHHHHHHHC
Confidence 4455544 567788877787654
No 60
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=35.74 E-value=13 Score=30.05 Aligned_cols=21 Identities=14% Similarity=0.167 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHhCCceeec
Q 025622 156 QELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (250)
.+.++++.+++...|.+|+++
T Consensus 100 ~~a~~~~~~~~~~~gd~vl~~ 120 (388)
T 1j32_A 100 KQSIFNLMLAMIEPGDEVIIP 120 (388)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEc
Confidence 566677777666666666554
No 61
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=35.68 E-value=29 Score=27.12 Aligned_cols=31 Identities=23% Similarity=0.245 Sum_probs=22.7
Q ss_pred chhHHHHHHHHHHHHHHhCCceeecCCCCch
Q 025622 152 GFMHQELIEILSYALVITKNHIYTSGASGTN 182 (250)
Q Consensus 152 ~~~hq~LIEllsyAlvl~gn~i~TSGA~GtN 182 (250)
|==...|.|.+..|+...-.-|+|||++|..
T Consensus 52 ~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~ 82 (167)
T 2g2c_A 52 PEGYDTVVEAIATALKQGARFIITAGGTGIR 82 (167)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 3334667777777765446899999999965
No 62
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=35.67 E-value=17 Score=29.53 Aligned_cols=21 Identities=19% Similarity=0.213 Sum_probs=11.0
Q ss_pred hhcCCCCCC---CCh---HHHhhhhhh
Q 025622 223 VIEKPHNDH---LPL---IEASRYTIS 243 (250)
Q Consensus 223 lvE~penD~---LpL---~eAS~lCns 243 (250)
+|..|+|-. +|. .+-..+|..
T Consensus 177 ~~~~p~nptG~~~~~~~l~~l~~~~~~ 203 (398)
T 3ele_A 177 IINSPNNPSGTVYSEETIKKLSDLLEK 203 (398)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHh
Confidence 456666543 563 333456654
No 63
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=35.50 E-value=26 Score=27.60 Aligned_cols=50 Identities=14% Similarity=0.201 Sum_probs=30.9
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHH-hCCceeecCCCCch
Q 025622 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVI-TKNHIYTSGASGTN 182 (250)
Q Consensus 128 ~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 182 (250)
++.++ +++.|-..+. ...+|=-...|.|.+..|+.. .-.-|+|||++|..
T Consensus 32 ~l~~~--L~~~G~~v~~---~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~ 82 (172)
T 1mkz_A 32 YLRDS--AQEAGHHVVD---KAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLT 82 (172)
T ss_dssp HHHHH--HHHTTCEEEE---EEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSS
T ss_pred HHHHH--HHHCCCeEeE---EEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCC
Confidence 55443 3455654221 123333346777888887765 46799999999975
No 64
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=35.41 E-value=15 Score=30.20 Aligned_cols=14 Identities=0% Similarity=-0.040 Sum_probs=9.7
Q ss_pred hHHHhhhhhhhhhc
Q 025622 234 LIEASRYTISFAFF 247 (250)
Q Consensus 234 L~eAS~lCns~~~~ 247 (250)
+.+-..+|...-.+
T Consensus 222 l~~l~~l~~~~~~~ 235 (426)
T 1sff_A 222 MQRLRALCDEHGIM 235 (426)
T ss_dssp HHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHcCCE
Confidence 77788888765443
No 65
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=35.27 E-value=16 Score=33.62 Aligned_cols=18 Identities=28% Similarity=0.361 Sum_probs=12.7
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 025622 173 IYTSGA--SGTNAAVIRGALR 191 (250)
Q Consensus 173 i~TSGA--~GtNaAvIRGalr 191 (250)
|+|||+ .|.||| |||+.|
T Consensus 8 VltsGGdapGmNa~-Ir~vv~ 27 (419)
T 3hno_A 8 YAQSGGVTAVINAS-AAGVIE 27 (419)
T ss_dssp EEECSSCCSSHHHH-HHHHHH
T ss_pred EEccCCChHHHHHH-HHHHHH
Confidence 689996 899974 454443
No 66
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=35.17 E-value=22 Score=28.37 Aligned_cols=21 Identities=0% Similarity=-0.083 Sum_probs=11.3
Q ss_pred hcCCCCCCCChHHHhhhhhhh
Q 025622 224 IEKPHNDHLPLIEASRYTISF 244 (250)
Q Consensus 224 vE~penD~LpL~eAS~lCns~ 244 (250)
+.+|...-.|+.+-..+|...
T Consensus 127 ~~~~tG~~~~l~~i~~l~~~~ 147 (375)
T 2fnu_A 127 SVDYAGKSVEVESVQKLCKKH 147 (375)
T ss_dssp EECGGGCCCCHHHHHHHHHHH
T ss_pred EeCCcCCccCHHHHHHHHHHc
Confidence 344444445666666666544
No 67
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=35.02 E-value=74 Score=24.93 Aligned_cols=61 Identities=20% Similarity=0.307 Sum_probs=37.7
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccCCChhHHHHHHH
Q 025622 140 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAK 219 (250)
Q Consensus 140 ~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~P~lLTViLPQSL~kQp~Es~elLe~ 219 (250)
.++|+|+|.-+|+- .+++.|+..|+.++-..-.-. .+++.|++-+-+| +...++.+++
T Consensus 19 ~~~I~iiG~G~mG~-------~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av~------~~~~~~v~~~ 76 (209)
T 2raf_A 19 GMEITIFGKGNMGQ-------AIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAVP------YPALAALAKQ 76 (209)
T ss_dssp -CEEEEECCSHHHH-------HHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECSC------HHHHHHHHHH
T ss_pred CCEEEEECCCHHHH-------HHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcCC------cHHHHHHHHH
Confidence 46899999988873 356777778888764432211 2346677766666 2345556665
Q ss_pred Hhh
Q 025622 220 VKT 222 (250)
Q Consensus 220 V~~ 222 (250)
+..
T Consensus 77 l~~ 79 (209)
T 2raf_A 77 YAT 79 (209)
T ss_dssp THH
T ss_pred HHH
Confidence 544
No 68
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=34.65 E-value=15 Score=29.34 Aligned_cols=25 Identities=8% Similarity=0.150 Sum_probs=17.1
Q ss_pred hhcCCCC---CCCChHHHhhhhhhhhhc
Q 025622 223 VIEKPHN---DHLPLIEASRYTISFAFF 247 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~~~~ 247 (250)
+++.|+| .-+|+.+-..+|.....+
T Consensus 152 ~~~~~~nptG~~~~~~~i~~~~~~~~~~ 179 (371)
T 2e7j_A 152 LITYPDGNYGNLPDVKKIAKVCSEYDVP 179 (371)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHTTTCC
T ss_pred EEECCCCCCcccCCHHHHHHHHHHcCCe
Confidence 4566644 467888888999875443
No 69
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=34.30 E-value=17 Score=32.30 Aligned_cols=19 Identities=53% Similarity=0.749 Sum_probs=14.0
Q ss_pred eeecCC--CCchHHHHHhhhhh
Q 025622 173 IYTSGA--SGTNAAVIRGALRA 192 (250)
Q Consensus 173 i~TSGA--~GtNaAvIRGalra 192 (250)
|+|||+ .|.||| |||+.|.
T Consensus 6 IltsGGdapGmNaa-ir~vv~~ 26 (319)
T 1zxx_A 6 ILTSGGDAPGMNAA-VRAVTRV 26 (319)
T ss_dssp EEECSSCCTTHHHH-HHHHHHH
T ss_pred EEccCCCchhHHHH-HHHHHHH
Confidence 689998 699974 5666554
No 70
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=34.29 E-value=17 Score=32.31 Aligned_cols=19 Identities=58% Similarity=0.928 Sum_probs=13.6
Q ss_pred eeecCC--CCchHHHHHhhhhh
Q 025622 173 IYTSGA--SGTNAAVIRGALRA 192 (250)
Q Consensus 173 i~TSGA--~GtNaAvIRGalra 192 (250)
|+|||+ .|.||| |||+.|.
T Consensus 7 IltsGGdapGmNaa-ir~vv~~ 27 (320)
T 1pfk_A 7 VLTSGGDAPGMNAA-IRGVVRS 27 (320)
T ss_dssp EEECSSCCTTHHHH-HHHHHHH
T ss_pred EEccCCCchhHHHH-HHHHHHH
Confidence 689998 699974 4555553
No 71
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=34.04 E-value=20 Score=28.70 Aligned_cols=103 Identities=19% Similarity=0.182 Sum_probs=49.2
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhhcCCCceeEeeccccc
Q 025622 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLK 207 (250)
Q Consensus 128 ~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~P~lLTViLPQSL~ 207 (250)
+-++++..-...+..|.+..+ -.+.++++..++...|.+|+++-- +-....+.+... .-+...|=+...
T Consensus 72 lr~~la~~~~~~~~~v~~~~g------~t~a~~~~~~~~~~~gd~vl~~~~--~~~~~~~~~~~~-g~~~~~v~~~~~-- 140 (363)
T 3ffh_A 72 LRKEVADFYQLEEEELIFTAG------VDELIELLTRVLLDTTTNTVMATP--TFVQYRQNALIE-GAEVREIPLLQD-- 140 (363)
T ss_dssp HHHHHHHHHTCCGGGEEEESS------HHHHHHHHHHHHCSTTCEEEEEES--SCHHHHHHHHHH-TCEEEEEECCTT--
T ss_pred HHHHHHHHhCCChhhEEEeCC------HHHHHHHHHHHHccCCCEEEEcCC--ChHHHHHHHHHc-CCEEEEecCCCC--
Confidence 556666655444455554433 356667777777666767666542 222333333332 333333333221
Q ss_pred CCChhHHHHHHHHhh------hhcCCCC---CCCChHHHhhhhhh
Q 025622 208 KQPPESQELLAKVKT------VIEKPHN---DHLPLIEASRYTIS 243 (250)
Q Consensus 208 kQp~Es~elLe~V~~------lvE~pen---D~LpL~eAS~lCns 243 (250)
...+ -|.|++.+. +|+.|+| .-+|..+-.++|..
T Consensus 141 -~~~d-~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~ 183 (363)
T 3ffh_A 141 -GEHD-LEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDR 183 (363)
T ss_dssp -SCCC-HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTT
T ss_pred -CCcC-HHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHh
Confidence 1111 223333221 4566655 44677776666653
No 72
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=33.78 E-value=23 Score=29.20 Aligned_cols=53 Identities=9% Similarity=0.137 Sum_probs=29.9
Q ss_pred ccccCCCh-hHHHHHHH-HHh-cCCc---eEEEecccccchhHHHHHHHHHHHHHHhCCceeecC
Q 025622 119 EFKPVPDV-DYLQELLA-IQQ-QGPR---AIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG 177 (250)
Q Consensus 119 ~~~~~p~v-D~lqELaa-IQq-~g~r---rIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSG 177 (250)
.|.+.+.. ++.++++. +.. .|+. .|.+..+ -++.++++..++...|.+|++.-
T Consensus 74 ~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g------~~~al~~~~~~~~~~gd~Vl~~~ 132 (413)
T 3t18_A 74 SYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPG------GTGAIRSAIFSYLDEGDPLICHD 132 (413)
T ss_dssp SCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESH------HHHHHHHHHHHHCCSSCEEEEES
T ss_pred CcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCc------cHHHHHHHHHHhcCCCCEEEECC
Confidence 45444333 36667766 423 3444 5554432 35667777777776777776654
No 73
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=33.64 E-value=28 Score=28.40 Aligned_cols=110 Identities=14% Similarity=0.039 Sum_probs=51.2
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHH----hCCceeecC-CCCchHHHHHhhhhhcCCCceeEee
Q 025622 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVI----TKNHIYTSG-ASGTNAAVIRGALRAERPDLLTVIL 202 (250)
Q Consensus 128 ~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl----~gn~i~TSG-A~GtNaAvIRGalrae~P~lLTViL 202 (250)
+.+.|+.+-...+..|.|..+ -.+.++++-.++.. .|..|+++. +-......++.+ +...-+... +
T Consensus 73 l~~~la~~~~~~~~~v~~~~g------gt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-~~~g~~~~~--v 143 (423)
T 3lvm_A 73 ARNQIADLVGADPREIVFTSG------ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTY--L 143 (423)
T ss_dssp HHHHHHHHHTCCGGGEEEESS------HHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHH-HHTTCEEEE--E
T ss_pred HHHHHHHHcCCCCCeEEEeCC------hHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHH-HHcCCEEEE--e
Confidence 334444444333335555433 25667777777764 467776653 333332222222 221222222 2
Q ss_pred cccccCCChhHHHHHHHHhh------hhcCCCC---CCCChHHHhhhhhhhhhcc
Q 025622 203 PQSLKKQPPESQELLAKVKT------VIEKPHN---DHLPLIEASRYTISFAFFL 248 (250)
Q Consensus 203 PQSL~kQp~Es~elLe~V~~------lvE~pen---D~LpL~eAS~lCns~~~~~ 248 (250)
|-.-+-. . .-+.|++.+. +++.|.| .-+|+.+-..+|.....++
T Consensus 144 ~~~~~~~-~-d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~l 196 (423)
T 3lvm_A 144 APQRNGI-I-DLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIY 196 (423)
T ss_dssp CCCTTSC-C-CHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEE
T ss_pred ccCCCCc-c-CHHHHHHhcCCCcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEE
Confidence 3111111 0 1233333221 4566554 4578999999998655443
No 74
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=33.52 E-value=17 Score=29.24 Aligned_cols=22 Identities=14% Similarity=0.123 Sum_probs=12.1
Q ss_pred hhcCCCCC---CCC---hHHHhhhhhhh
Q 025622 223 VIEKPHND---HLP---LIEASRYTISF 244 (250)
Q Consensus 223 lvE~penD---~Lp---L~eAS~lCns~ 244 (250)
+|+.|+|- -+| +.+-..+|...
T Consensus 162 ~~~~~~nptG~~~~~~~l~~i~~~~~~~ 189 (367)
T 3euc_A 162 YLAYPNNPTGNLFDAADMEAIVRAAQGS 189 (367)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHTBTT
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHhhhhc
Confidence 45677663 243 44555567654
No 75
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=33.44 E-value=22 Score=28.83 Aligned_cols=24 Identities=8% Similarity=-0.002 Sum_probs=17.4
Q ss_pred hcCCCCCCCChHHHhhhhhhhhhc
Q 025622 224 IEKPHNDHLPLIEASRYTISFAFF 247 (250)
Q Consensus 224 vE~penD~LpL~eAS~lCns~~~~ 247 (250)
+.+|...-.++.+-..+|.....+
T Consensus 130 ~~n~~G~~~~l~~i~~l~~~~~~~ 153 (373)
T 3frk_A 130 AVHLYGQPADMDEIKRIAKKYNLK 153 (373)
T ss_dssp EECCTTCCCCHHHHHHHHHHHTCE
T ss_pred EECCCcCcccHHHHHHHHHHcCCE
Confidence 566777778888888888765433
No 76
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=33.37 E-value=26 Score=28.47 Aligned_cols=22 Identities=18% Similarity=0.365 Sum_probs=13.0
Q ss_pred hhcCCCCCC---C---ChHHHhhhhhhh
Q 025622 223 VIEKPHNDH---L---PLIEASRYTISF 244 (250)
Q Consensus 223 lvE~penD~---L---pL~eAS~lCns~ 244 (250)
+|+.|+|-. + .+.+-..+|...
T Consensus 172 ~~~~p~nptG~~~~~~~l~~l~~~~~~~ 199 (410)
T 3e2y_A 172 ILNTPHNPLGKVYTRQELQVIADLCVKH 199 (410)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHc
Confidence 467777743 3 355666677644
No 77
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=33.21 E-value=13 Score=31.30 Aligned_cols=10 Identities=40% Similarity=0.617 Sum_probs=8.6
Q ss_pred ceeecCCCCc
Q 025622 172 HIYTSGASGT 181 (250)
Q Consensus 172 ~i~TSGA~Gt 181 (250)
-|||||.||.
T Consensus 42 Il~TSGTTG~ 51 (358)
T 4gs5_A 42 VLHTSGSTGM 51 (358)
T ss_dssp EEEEECTTSS
T ss_pred EEECCccccc
Confidence 4799999995
No 78
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=33.12 E-value=33 Score=27.07 Aligned_cols=28 Identities=29% Similarity=0.261 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHhCCceeecCCCCchH
Q 025622 156 QELIEILSYALVITKNHIYTSGASGTNA 183 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TSGA~GtNa 183 (250)
..|.|.+..|+...-+-|+|||++|...
T Consensus 53 ~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 53 SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 5667777777654567899999999754
No 79
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=33.00 E-value=19 Score=30.32 Aligned_cols=25 Identities=12% Similarity=0.169 Sum_probs=15.7
Q ss_pred hhcCCCC---CCCC---hHHHhhhhhhhhhc
Q 025622 223 VIEKPHN---DHLP---LIEASRYTISFAFF 247 (250)
Q Consensus 223 lvE~pen---D~Lp---L~eAS~lCns~~~~ 247 (250)
+|+.|+| ..+| +.+-..+|...-.+
T Consensus 196 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 226 (427)
T 3dyd_A 196 IVNNPSNPCGSVFSKRHLQKILAVAARQCVP 226 (427)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCC
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHCCCE
Confidence 4566655 4567 77777888665433
No 80
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=32.94 E-value=67 Score=24.27 Aligned_cols=47 Identities=11% Similarity=0.139 Sum_probs=28.8
Q ss_pred HHHHHHHHHhc---CCceEEEecccccchhHHH-HHHHHHHHHHHhCC--ceeecC
Q 025622 128 YLQELLAIQQQ---GPRAIGFFGTRNMGFMHQE-LIEILSYALVITKN--HIYTSG 177 (250)
Q Consensus 128 ~lqELaaIQq~---g~rrIa~lGsRhv~~~hq~-LIEllsyAlvl~gn--~i~TSG 177 (250)
+++++..+... +.+.|.|.| -=|++|-. |.|++.++-.. |- .|.|.|
T Consensus 55 i~~~i~~~~~~~~~~~~~i~~~G--GEP~l~~~~l~~l~~~~~~~-~~~i~i~Tng 107 (245)
T 3c8f_A 55 LMKEVVTYRHFMNASGGGVTASG--GEAILQAEFVRDWFRACKKE-GIHTCLDTNG 107 (245)
T ss_dssp HHHHHGGGHHHHTSTTCEEEEEE--SCGGGGHHHHHHHHHHHHTT-TCCEEEEECC
T ss_pred HHHHHHHhhhhhcCCCCeEEEEC--CCcCCCHHHHHHHHHHHHHc-CCcEEEEeCC
Confidence 55555544433 457788888 45888877 57888877543 32 355655
No 81
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=32.90 E-value=10 Score=33.32 Aligned_cols=20 Identities=25% Similarity=0.139 Sum_probs=15.9
Q ss_pred ceeecCCCCchHHHHHhhhhh
Q 025622 172 HIYTSGASGTNAAVIRGALRA 192 (250)
Q Consensus 172 ~i~TSGA~GtNaAvIRGalra 192 (250)
-++|||+ +.|.+++++.++.
T Consensus 114 V~~~sGs-~an~~~~~all~p 133 (483)
T 1rv3_A 114 VQPYSGS-PANFAVYTALVEP 133 (483)
T ss_dssp CCCSSHH-HHHHHHHHHHTCT
T ss_pred EEECCcH-HHHHHHHHHhcCC
Confidence 5788888 8888888887654
No 82
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=32.76 E-value=31 Score=26.88 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=23.1
Q ss_pred cchhHHHHHHHHHHHHHH-hCCceeecCCCCch
Q 025622 151 MGFMHQELIEILSYALVI-TKNHIYTSGASGTN 182 (250)
Q Consensus 151 v~~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 182 (250)
+|=-...|.|.+..|+.. .-.-|+|||++|..
T Consensus 52 v~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 84 (167)
T 1uuy_A 52 VPDEVERIKDILQKWSDVDEMDLILTLGGTGFT 84 (167)
T ss_dssp ECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred cCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 333346777888887763 56789999999875
No 83
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=32.39 E-value=33 Score=27.21 Aligned_cols=51 Identities=12% Similarity=0.008 Sum_probs=33.1
Q ss_pred HHHHHH-HHHhcCCceEEEecccccchhHHHHHHHHHHHHHH-hCCceeecCCCCch
Q 025622 128 YLQELL-AIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVI-TKNHIYTSGASGTN 182 (250)
Q Consensus 128 ~lqELa-aIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 182 (250)
++.++. .+.+.|-.. ..+ .+|=-...|.|.+..++.. .-.-|+|||++|..
T Consensus 29 ~l~~~l~~l~~~G~~v--~~~--iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~g 81 (178)
T 2pbq_A 29 AIIDYLKDVIITPFEV--EYR--VIPDERDLIEKTLIELADEKGCSLILTTGGTGPA 81 (178)
T ss_dssp HHHHHHHHHBCSCCEE--EEE--EECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred HHHHHHHHHHhCCCEE--EEE--EcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 555443 233567543 222 5555567788888888763 56789999999976
No 84
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=32.18 E-value=20 Score=28.41 Aligned_cols=25 Identities=4% Similarity=0.060 Sum_probs=15.7
Q ss_pred hhcCCCC---CCCChHHHhhhhhhhhhc
Q 025622 223 VIEKPHN---DHLPLIEASRYTISFAFF 247 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~~~~ 247 (250)
+++.|+| .-+|+.+-..+|.....+
T Consensus 132 ~~~~~~nptG~~~~l~~i~~l~~~~~~~ 159 (384)
T 3zrp_A 132 ALTHVETSTGVREPVKDVINKIRKYVEL 159 (384)
T ss_dssp EEESEETTTTEECCHHHHHHHHGGGEEE
T ss_pred EEeCCCCCCceECcHHHHHHHHHhcCCE
Confidence 3444543 457788888888765443
No 85
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=31.49 E-value=22 Score=28.67 Aligned_cols=23 Identities=13% Similarity=0.182 Sum_probs=14.1
Q ss_pred hhcCCCC---CCCChHHHhhhhhhhhh
Q 025622 223 VIEKPHN---DHLPLIEASRYTISFAF 246 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~~~ 246 (250)
+++.|.| .-+|+. -..+|.....
T Consensus 159 ~~~~p~nptG~~~~~~-l~~~~~~~~~ 184 (370)
T 2z61_A 159 IINSPSNPLGEVIDRE-IYEFAYENIP 184 (370)
T ss_dssp EEESSCTTTCCCCCHH-HHHHHHHHCS
T ss_pred EEcCCCCCcCcccCHH-HHHHHHHcCC
Confidence 4576665 456776 6677765433
No 86
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=31.31 E-value=35 Score=28.25 Aligned_cols=83 Identities=14% Similarity=0.154 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHhCCceeecC-CCCchHHHHHhhhhhcCCCceeEeecccccCCChhHHHHHHHHhh------hhcCCCC
Q 025622 157 ELIEILSYALVITKNHIYTSG-ASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKT------VIEKPHN 229 (250)
Q Consensus 157 ~LIEllsyAlvl~gn~i~TSG-A~GtNaAvIRGalrae~P~lLTViLPQSL~kQp~Es~elLe~V~~------lvE~pen 229 (250)
+-++++-.++...|.+|+++- .-+.....++..++...-+. +.+|-. .-|.|++.+. ++|.|.|
T Consensus 90 ~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~--~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~n 160 (398)
T 2rfv_A 90 SAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINV--RFVDAA-------KPEEIRAAMRPETKVVYIETPAN 160 (398)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEE--EEECTT-------SHHHHHHHCCTTEEEEEEESSBT
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEE--EEeCCC-------CHHHHHHhcCCCCeEEEEECCCC
Confidence 456666666666676666553 22222223322223222222 223321 2233333221 4677776
Q ss_pred C---CCChHHHhhhhhhhhhcc
Q 025622 230 D---HLPLIEASRYTISFAFFL 248 (250)
Q Consensus 230 D---~LpL~eAS~lCns~~~~~ 248 (250)
- -.++.+-..+|.....++
T Consensus 161 ptG~~~~l~~i~~l~~~~~~~l 182 (398)
T 2rfv_A 161 PTLSLVDIETVAGIAHQQGALL 182 (398)
T ss_dssp TTTBCCCHHHHHHHHHHTTCEE
T ss_pred CCCcccCHHHHHHHHHHcCCEE
Confidence 3 568888899998754433
No 87
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=31.17 E-value=19 Score=28.64 Aligned_cols=22 Identities=14% Similarity=-0.005 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHhCCceeecC
Q 025622 156 QELIEILSYALVITKNHIYTSG 177 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TSG 177 (250)
.+.++++..++...|.+|++..
T Consensus 78 ~~a~~~~~~~l~~~gd~vl~~~ 99 (354)
T 3ly1_A 78 SEGIRAAIEAYASLEAQLVIPE 99 (354)
T ss_dssp HHHHHHHHHHHCCTTCEEEEES
T ss_pred HHHHHHHHHHHhCCCCeEEECC
Confidence 4556666666655565555543
No 88
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=31.03 E-value=25 Score=28.65 Aligned_cols=25 Identities=12% Similarity=-0.006 Sum_probs=16.8
Q ss_pred hhcCCCCC---CCChHHHhhhhhhhhhc
Q 025622 223 VIEKPHND---HLPLIEASRYTISFAFF 247 (250)
Q Consensus 223 lvE~penD---~LpL~eAS~lCns~~~~ 247 (250)
+++.|.|- -+|+.+-..+|.....+
T Consensus 178 ~~~~~~nptG~~~~~~~l~~~~~~~~~~ 205 (398)
T 3a2b_A 178 CTDGIFSMEGDIVNLPELTSIANEFDAA 205 (398)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHHHHTCE
T ss_pred EEeCCCCCCCCccCHHHHHHHHHHcCcE
Confidence 34666653 57888989999765433
No 89
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=30.99 E-value=17 Score=29.82 Aligned_cols=21 Identities=10% Similarity=0.025 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHhCCceeec
Q 025622 156 QELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (250)
++.++++..++...|.+|++.
T Consensus 101 ~~al~~~~~~l~~~gd~Vlv~ 121 (385)
T 1b5p_A 101 SQALFNLFQAILDPGDEVIVL 121 (385)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEc
Confidence 445555555554445444443
No 90
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=30.95 E-value=49 Score=26.97 Aligned_cols=45 Identities=29% Similarity=0.332 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHhcCC-----ceEEEecccccchhHHHHHHHHHHHHHHhCCceeecC
Q 025622 126 VDYLQELLAIQQQGP-----RAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG 177 (250)
Q Consensus 126 vD~lqELaaIQq~g~-----rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSG 177 (250)
||+..+....|..++ ++|||+|.-+|+-. ++..|+..|+.++-..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~-------~a~~l~~~g~~V~~~~ 60 (316)
T 2uyy_A 11 VDLGTENLYFQSMGSITPTDKKIGFLGLGLMGSG-------IVSNLLKMGHTVTVWN 60 (316)
T ss_dssp --------------CCCCCSSCEEEECCSHHHHH-------HHHHHHHTTCCEEEEC
T ss_pred cCccccceeecCCCCCCCCCCeEEEEcccHHHHH-------HHHHHHhCCCEEEEEe
Confidence 677777777776555 78999999887753 3445556687765443
No 91
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=30.94 E-value=2.4e+02 Score=23.77 Aligned_cols=92 Identities=15% Similarity=0.144 Sum_probs=53.6
Q ss_pred eeecccccCCChh--HHHHHHH-HHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhCCceeecCCCCchHHH--HH
Q 025622 115 VMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNHIYTSGASGTNAAV--IR 187 (250)
Q Consensus 115 v~~~~~~~~p~vD--~lqELaa-IQq~g~rrIa~lGsR--hv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAv--IR 187 (250)
..+.++..--++| -+++|.. +-+.|-.-|.++||- -.-..+.+-.+++..+.-..+.-|+-.|+..|.-++ .|
T Consensus 6 a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~gviaGvg~~~t~~ai~la~ 85 (293)
T 1w3i_A 6 PIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKIIFQVGGLNLDDAIRLAK 85 (293)
T ss_dssp ECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHH
T ss_pred EeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHH
Confidence 3345554322355 4555555 446899999999983 455667777777776665444444445555555544 33
Q ss_pred hhhhhcCCCceeEeeccccc
Q 025622 188 GALRAERPDLLTVILPQSLK 207 (250)
Q Consensus 188 Galrae~P~lLTViLPQSL~ 207 (250)
-|-++ ..+-+-|+-|--.+
T Consensus 86 ~A~~~-Gadavlv~~P~y~~ 104 (293)
T 1w3i_A 86 LSKDF-DIVGIASYAPYYYP 104 (293)
T ss_dssp HGGGS-CCSEEEEECCCSCS
T ss_pred HHHhc-CCCEEEEcCCCCCC
Confidence 34333 56777777665433
No 92
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=30.83 E-value=28 Score=28.18 Aligned_cols=19 Identities=16% Similarity=0.034 Sum_probs=11.9
Q ss_pred ceeecCCCCchHHHHHhhh
Q 025622 172 HIYTSGASGTNAAVIRGAL 190 (250)
Q Consensus 172 ~i~TSGA~GtNaAvIRGal 190 (250)
-++|+|++..+.++++..+
T Consensus 90 v~~~~g~~~a~~~~~~~~~ 108 (389)
T 1gd9_A 90 IMVLLGANQAFLMGLSAFL 108 (389)
T ss_dssp EEEESSTTHHHHHHHTTTC
T ss_pred EEEcCChHHHHHHHHHHhC
Confidence 5666666666666666653
No 93
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=30.54 E-value=15 Score=28.67 Aligned_cols=25 Identities=4% Similarity=-0.099 Sum_probs=16.3
Q ss_pred hhcCCCC---CCCChHHHhhhhhhhhhc
Q 025622 223 VIEKPHN---DHLPLIEASRYTISFAFF 247 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~~~~ 247 (250)
+++.|.| .-+|+.+-.++|.....+
T Consensus 129 ~~~~~~nptG~~~~~~~i~~l~~~~~~~ 156 (353)
T 2yrr_A 129 ALVHGETSTGVLNPAEAIGALAKEAGAL 156 (353)
T ss_dssp EEESEETTTTEECCHHHHHHHHHHHTCE
T ss_pred EEEccCCCcceecCHHHHHHHHHHcCCe
Confidence 4566654 347888888888765443
No 94
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=30.47 E-value=25 Score=29.30 Aligned_cols=22 Identities=9% Similarity=0.101 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHhCCceeec
Q 025622 155 HQELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 155 hq~LIEllsyAlvl~gn~i~TS 176 (250)
-.+.++++..++...|..|++.
T Consensus 120 g~~a~~~~~~~l~~~gd~vl~~ 141 (435)
T 3piu_A 120 ATSANETFIFCLADPGEAVLIP 141 (435)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEE
T ss_pred hHHHHHHHHHHhcCCCCeEEEC
Confidence 3455666666665555555543
No 95
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=30.47 E-value=13 Score=30.91 Aligned_cols=38 Identities=16% Similarity=0.090 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHH-------HHhCCceeecCCCCchHHHHHhhhhh
Q 025622 155 HQELIEILSYAL-------VITKNHIYTSGASGTNAAVIRGALRA 192 (250)
Q Consensus 155 hq~LIEllsyAl-------vl~gn~i~TSGA~GtNaAvIRGalra 192 (250)
+..|-|-++.-+ +-..+-++|+|++..+.+++++.++.
T Consensus 85 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~ 129 (444)
T 3if2_A 85 DSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGA 129 (444)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEE
T ss_pred CHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCC
Confidence 445555555544 23467889999999999999988654
No 96
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=30.38 E-value=22 Score=29.49 Aligned_cols=45 Identities=9% Similarity=0.177 Sum_probs=27.9
Q ss_pred hHHHHHHHHHh--------cCCceEEEecccccchhHHHHHHHHHHHHHHhCCceeecC
Q 025622 127 DYLQELLAIQQ--------QGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG 177 (250)
Q Consensus 127 D~lqELaaIQq--------~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSG 177 (250)
++.++++..-. ..+..|.+.. --++.|+++.+++...|..|++.-
T Consensus 87 ~lr~~la~~~~~~~g~~~~~~~~~i~~~~------G~~~ai~~~~~~~~~~gd~Vl~~~ 139 (428)
T 1iay_A 87 EFRKAIAKFMEKTRGGRVRFDPERVVMAG------GATGANETIIFCLADPGDAFLVPS 139 (428)
T ss_dssp HHHHHHHHHHHHHTTTCSCCCTTSCEEEE------HHHHHHHHHHHHHCCTTCEEEEES
T ss_pred HHHHHHHHHHHHhcCCCCCCChhhEEEcc------ChHHHHHHHHHHhCCCCCeEEEcc
Confidence 36666776654 2244554332 246788888888877777776653
No 97
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=30.29 E-value=27 Score=28.78 Aligned_cols=53 Identities=13% Similarity=0.089 Sum_probs=32.3
Q ss_pred ccccCCCh-hHHHHHHH-HHh-cCCc---eEEEecccccchhHHHHHHHHHHHHHHhCCceeecC
Q 025622 119 EFKPVPDV-DYLQELLA-IQQ-QGPR---AIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG 177 (250)
Q Consensus 119 ~~~~~p~v-D~lqELaa-IQq-~g~r---rIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSG 177 (250)
.|.+.... ++.++++. +.. .|+. .|.+..+ -++.++++..++...|.+|++.-
T Consensus 75 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g------~~~al~~~~~~l~~~gd~Vl~~~ 133 (418)
T 3rq1_A 75 GYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAG------GTGGIHHLIHNYTEPGDEVLTAD 133 (418)
T ss_dssp SCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESH------HHHHHHHHHHHHSCTTCEEEEES
T ss_pred CCCCCCChHHHHHHHHHHHhcccCccccccEEECCc------hHHHHHHHHHHhcCCCCEEEECC
Confidence 45554433 36777776 323 3555 5555432 36677888888877788877764
No 98
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=30.11 E-value=31 Score=27.12 Aligned_cols=22 Identities=9% Similarity=-0.087 Sum_probs=11.2
Q ss_pred hhcCCCCCCC--C---hHHHhhhhhhh
Q 025622 223 VIEKPHNDHL--P---LIEASRYTISF 244 (250)
Q Consensus 223 lvE~penD~L--p---L~eAS~lCns~ 244 (250)
+++.|.|... | +.+-..+|...
T Consensus 146 ~~~~~~~tG~~~~~~~l~~i~~~~~~~ 172 (356)
T 1v72_A 146 SITQATEVGSIYTLDEIEAIGDVCKSS 172 (356)
T ss_dssp EEESSCTTSCCCCHHHHHHHHHHHHHT
T ss_pred EEEcCCCCCccCCHHHHHHHHHHHHHc
Confidence 4566655432 2 34455666544
No 99
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=29.31 E-value=43 Score=27.19 Aligned_cols=48 Identities=15% Similarity=0.145 Sum_probs=31.3
Q ss_pred HHHHHHHHHhcCCc--eEEEecccccchhHHHHHHHHHHHHHHhCCceeecCCCCchH
Q 025622 128 YLQELLAIQQQGPR--AIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNA 183 (250)
Q Consensus 128 ~lqELaaIQq~g~r--rIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNa 183 (250)
++.++ +++.|-. ++.+++- -...|.|.+..|+.. -.-|+|||++|...
T Consensus 27 ~l~~~--L~~~G~~v~~~~iv~D-----d~~~I~~~l~~a~~~-~DlVittGG~g~~~ 76 (172)
T 3kbq_A 27 FIGNF--LTYHGYQVRRGFVVMD-----DLDEIGWAFRVALEV-SDLVVSSGGLGPTF 76 (172)
T ss_dssp HHHHH--HHHTTCEEEEEEEECS-----CHHHHHHHHHHHHHH-CSEEEEESCCSSST
T ss_pred HHHHH--HHHCCCEEEEEEEeCC-----CHHHHHHHHHHHHhc-CCEEEEcCCCcCCc
Confidence 45443 3455643 3444443 356788888877664 78999999999764
No 100
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=29.30 E-value=32 Score=27.53 Aligned_cols=21 Identities=19% Similarity=0.249 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHhCCceeec
Q 025622 156 QELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (250)
++.++++..++...|.+|++.
T Consensus 92 ~~a~~~~~~~l~~~gd~vl~~ 112 (365)
T 3get_A 92 DQVIEFAIHSKLNSKNAFLQA 112 (365)
T ss_dssp HHHHHHHHHHHCCTTCEEEEC
T ss_pred HHHHHHHHHHHhCCCCEEEEe
Confidence 445555555555555555554
No 101
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=29.28 E-value=25 Score=27.55 Aligned_cols=22 Identities=9% Similarity=0.013 Sum_probs=14.6
Q ss_pred CCCCCCChHHHhhhhhhhhhcc
Q 025622 227 PHNDHLPLIEASRYTISFAFFL 248 (250)
Q Consensus 227 penD~LpL~eAS~lCns~~~~~ 248 (250)
|...-+|+.+-..+|.....++
T Consensus 143 ptG~~~~l~~i~~l~~~~~~~l 164 (366)
T 1m32_A 143 TTGMLNPIDEVGALAHRYGKTY 164 (366)
T ss_dssp TTTEECCHHHHHHHHHHHTCEE
T ss_pred CcceecCHHHHHHHHHHcCCEE
Confidence 3345578888888887654443
No 102
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=29.25 E-value=36 Score=27.79 Aligned_cols=16 Identities=6% Similarity=-0.157 Sum_probs=8.8
Q ss_pred ecCCCCchHHHHHhhh
Q 025622 175 TSGASGTNAAVIRGAL 190 (250)
Q Consensus 175 TSGA~GtNaAvIRGal 190 (250)
|+|+++.+..++++..
T Consensus 102 t~G~~~al~~~~~~l~ 117 (401)
T 7aat_A 102 GISGTGSLRVGANFLQ 117 (401)
T ss_dssp EEHHHHHHHHHHHHHH
T ss_pred cCcchHHHHHHHHHHH
Confidence 5666555555555443
No 103
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=29.21 E-value=32 Score=28.92 Aligned_cols=25 Identities=12% Similarity=-0.075 Sum_probs=17.3
Q ss_pred hhcCCCC---CCCChHHHhhhhhhhhhc
Q 025622 223 VIEKPHN---DHLPLIEASRYTISFAFF 247 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~~~~ 247 (250)
++|.|.| .-.++.+-..+|.....+
T Consensus 145 ~~~~~~n~~G~~~~l~~i~~l~~~~~~~ 172 (412)
T 2cb1_A 145 FVETVANPALLVPDLEALATLAEEAGVA 172 (412)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHTCE
T ss_pred EEeCCCCCCcccccHHHHHHHHHHcCCE
Confidence 4566666 457899999999765433
No 104
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=29.17 E-value=24 Score=28.67 Aligned_cols=22 Identities=14% Similarity=0.076 Sum_probs=12.9
Q ss_pred hcCCCCC---CCC---hHHHhhhhhhhh
Q 025622 224 IEKPHND---HLP---LIEASRYTISFA 245 (250)
Q Consensus 224 vE~penD---~Lp---L~eAS~lCns~~ 245 (250)
|..|+|- -+| +.+-..+|....
T Consensus 168 l~~p~nptG~~~~~~~l~~l~~~~~~~~ 195 (390)
T 1d2f_A 168 LCSPQNPTGKVWTCDELEIMADLCERHG 195 (390)
T ss_dssp EESSCTTTCCCCCTTHHHHHHHHHHHTT
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcC
Confidence 4667653 345 566677776543
No 105
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=29.06 E-value=31 Score=27.63 Aligned_cols=22 Identities=9% Similarity=0.060 Sum_probs=10.8
Q ss_pred hhcCCCCC---CCChHH---Hhhhhhhh
Q 025622 223 VIEKPHND---HLPLIE---ASRYTISF 244 (250)
Q Consensus 223 lvE~penD---~LpL~e---AS~lCns~ 244 (250)
+++.|+|- -+|..+ -..+|...
T Consensus 155 ~i~~p~nptG~~~~~~~l~~l~~~~~~~ 182 (377)
T 3fdb_A 155 LLCNPYNPLGMVFAPEWLNELCDLAHRY 182 (377)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHT
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHc
Confidence 45666553 355443 34446554
No 106
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=28.93 E-value=2.6e+02 Score=23.59 Aligned_cols=63 Identities=10% Similarity=-0.018 Sum_probs=41.6
Q ss_pred hHHHHHHHHHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhCCce-eecCCCCchHHHHHhhhhh
Q 025622 127 DYLQELLAIQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNHI-YTSGASGTNAAVIRGALRA 192 (250)
Q Consensus 127 D~lqELaaIQq~g~rrIa~lGsR--hv~~~hq~LIEllsyAlvl~gn~i-~TSGA~GtNaAvIRGalra 192 (250)
++++|+..+.+.|.++|.|-|+- +-+.-+..+.|++.+.-.. |=.| +|.|. .+...++-..++
T Consensus 103 ei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~-g~~i~~t~G~--l~~e~l~~L~~a 168 (369)
T 1r30_A 103 QVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAM-GLEACMTLGT--LSESQAQRLANA 168 (369)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHT-TSEEEEECSS--CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHc-CCeEEEecCC--CCHHHHHHHHHC
Confidence 37888888888999999998753 5666788899999877653 3223 34443 344455544443
No 107
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=28.80 E-value=26 Score=30.43 Aligned_cols=70 Identities=23% Similarity=0.196 Sum_probs=42.0
Q ss_pred CCceEEEecccccchhHHHHHHHHHHHHHHhCCce----eecCCCCchHHHHHhhhhhcCCCceeEeecccccCCChhHH
Q 025622 139 GPRAIGFFGTRNMGFMHQELIEILSYALVITKNHI----YTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQ 214 (250)
Q Consensus 139 g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i----~TSGA~GtNaAvIRGalrae~P~lLTViLPQSL~kQp~Es~ 214 (250)
.++.|-|+|||+. .|.+|+-. |..-..+.| . .|++=||-.. +.. ..|++|-|+
T Consensus 65 ~~~~iLfVgtk~~---~~~~V~~~--A~~~g~~yv~~~RW-lgG~LTN~~t--~~~--~~PdlliV~------------- 121 (241)
T 2xzm_B 65 HPEDVMVVCSRIY---GQRAAIKF--AGYTHCKSTSSSRW-TPGTLTNYQT--LKY--EEPRVLIVT------------- 121 (241)
T ss_dssp SGGGEEEECCSHH---HHHHHHHH--HHHHTCBCCCCSSC-CTTTTTCTTC--TTC--CCCSEEEES-------------
T ss_pred CCCeEEEEECCHH---HHHHHHHH--HHHhCCEEeccccc-cCCcccCccc--ccc--CCCCEEEEE-------------
Confidence 3578999999975 36666533 333333334 3 3777777643 322 258877665
Q ss_pred HHHHHHhhhhcCCCCCCCChHHHhhhhh
Q 025622 215 ELLAKVKTVIEKPHNDHLPLIEASRYTI 242 (250)
Q Consensus 215 elLe~V~~lvE~penD~LpL~eAS~lCn 242 (250)
.|..||.++.||+++++
T Consensus 122 -----------Dp~~e~~ai~EA~~l~I 138 (241)
T 2xzm_B 122 -----------DPRSDFQAIKEASYVNI 138 (241)
T ss_dssp -----------CTTTTHHHHHHHTTTTC
T ss_pred -----------CCCcchHHHHHHHHhCC
Confidence 34566777777776654
No 108
>3ml1_A NAPA, periplasmic nitrate reductase; heterodimer, oxidoreductase; HET: MGD HEC; 1.60A {Ralstonia eutropha} PDB: 3o5a_A* 1ogy_A* 2nya_A*
Probab=28.74 E-value=73 Score=30.75 Aligned_cols=35 Identities=29% Similarity=0.615 Sum_probs=25.8
Q ss_pred ccccCCC---hh-HHHHHHHHHh-cCCceEEEecccccch
Q 025622 119 EFKPVPD---VD-YLQELLAIQQ-QGPRAIGFFGTRNMGF 153 (250)
Q Consensus 119 ~~~~~p~---vD-~lqELaaIQq-~g~rrIa~lGsRhv~~ 153 (250)
+++++.- +| ++++|..|++ .|+..|+++|+-.+..
T Consensus 87 ~~~~isWdeAl~~ia~~l~~i~~~~G~~si~~~~sg~~~~ 126 (802)
T 3ml1_A 87 DFAPVTWDQAFDEMERQFKRVLKEKGPTAVGMFGSGQWTV 126 (802)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHHTCGGGEEEEECTTSCH
T ss_pred CeEEeCHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCCCch
Confidence 4555552 67 7788888766 6999999999877654
No 109
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=28.73 E-value=30 Score=28.47 Aligned_cols=22 Identities=14% Similarity=0.190 Sum_probs=11.8
Q ss_pred hcCCCCC---CCC---hHHHhhhhhhhh
Q 025622 224 IEKPHND---HLP---LIEASRYTISFA 245 (250)
Q Consensus 224 vE~penD---~Lp---L~eAS~lCns~~ 245 (250)
|..|+|- -+| +.+-..+|...-
T Consensus 188 l~~p~nptG~~~~~~~l~~i~~~a~~~~ 215 (437)
T 3g0t_A 188 YSNPNNPTWQCMTDEELRIIGELATKHD 215 (437)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTT
T ss_pred EeCCCCCCCCcCCHHHHHHHHHHHHHCC
Confidence 4566553 355 444566776443
No 110
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=28.55 E-value=46 Score=27.15 Aligned_cols=40 Identities=10% Similarity=0.045 Sum_probs=28.1
Q ss_pred chhHHHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhh
Q 025622 152 GFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRA 192 (250)
Q Consensus 152 ~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalra 192 (250)
.-.++.|.|.++.-+- ..+-++|+|++..|.++|+.+...
T Consensus 77 ~~~~~~l~~~la~~~~-~~~v~~~~gg~ea~~~al~~~~~~ 116 (395)
T 3nx3_A 77 NENIAAAAKNLAKASA-LERVFFTNSGTESIEGAMKTARKY 116 (395)
T ss_dssp CHHHHHHHHHHHHHHT-CSEEEEESSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC-CCeEEEeCCHHHHHHHHHHHHHHH
Confidence 3456666666665442 456788999999999999877654
No 111
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=28.36 E-value=17 Score=35.07 Aligned_cols=31 Identities=13% Similarity=0.135 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHhCCceeecCCCCchHHHHHh
Q 025622 156 QELIEILSYALVITKNHIYTSGASGTNAAVIRG 188 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRG 188 (250)
-..++++-.|++..|.+|+++-- ...+++.|
T Consensus 199 t~an~~ai~al~~pGD~VLv~~~--~H~S~~~~ 229 (730)
T 1c4k_A 199 SNANNTVTSALVSNGDLVLFDRN--NHKSVYNS 229 (730)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETT--CCHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEEcCC--chHHHHHH
Confidence 34566666667777777776532 34455555
No 112
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=28.32 E-value=49 Score=27.51 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHHHH-hCCceeecCCCCchHHHHHhhhh
Q 025622 154 MHQELIEILSYALVI-TKNHIYTSGASGTNAAVIRGALR 191 (250)
Q Consensus 154 ~hq~LIEllsyAlvl-~gn~i~TSGA~GtNaAvIRGalr 191 (250)
.+..|.|.++.-+-. ..+-++|+|++-.|.++|+.+.+
T Consensus 73 ~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~ 111 (430)
T 3i4j_A 73 VLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQ 111 (430)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHH
Confidence 445555555543211 23567777777777777776654
No 113
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=28.05 E-value=37 Score=27.38 Aligned_cols=91 Identities=11% Similarity=0.126 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccCCChhHHHHHHH--Hh-hhhcCCCC---
Q 025622 156 QELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAK--VK-TVIEKPHN--- 229 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~P~lLTViLPQSL~kQp~Es~elLe~--V~-~lvE~pen--- 229 (250)
.+-++++..++...|.+|+++--+ -.+.....+++...-+...|=++....--+.+-.+.+++ +. =+++.|+|
T Consensus 74 t~al~~~~~~~~~~gd~Vl~~~~~-~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 152 (411)
T 3nnk_A 74 RAGIEAILVSAIRPGDKVLVPVFG-RFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTT 152 (411)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEECS-HHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HHHHHHHHHHhcCCCCEEEEecCC-chHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcc
Confidence 345666666666667777665421 111112223332233333332322111112223333332 10 13455443
Q ss_pred CCCChHHHhhhhhhhhhc
Q 025622 230 DHLPLIEASRYTISFAFF 247 (250)
Q Consensus 230 D~LpL~eAS~lCns~~~~ 247 (250)
.-.|+.+-..+|...-.+
T Consensus 153 ~~~~l~~i~~l~~~~~~~ 170 (411)
T 3nnk_A 153 MLQPLAELGEICRRYDAL 170 (411)
T ss_dssp EECCCTTHHHHHHHHTCE
T ss_pred eeccHHHHHHHHHHcCCE
Confidence 456777888888765443
No 114
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=27.95 E-value=23 Score=27.88 Aligned_cols=35 Identities=11% Similarity=0.185 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHH--hCCceeecCCCCchHHHHHhhh
Q 025622 156 QELIEILSYALVI--TKNHIYTSGASGTNAAVIRGAL 190 (250)
Q Consensus 156 q~LIEllsyAlvl--~gn~i~TSGA~GtNaAvIRGal 190 (250)
+.+.|.++.-+-. ..+-++|+|++..+.+++++.+
T Consensus 46 ~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~ 82 (362)
T 3ffr_A 46 KTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV 82 (362)
T ss_dssp HHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc
Confidence 4444444444322 2346677787777777777765
No 115
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=27.84 E-value=27 Score=27.91 Aligned_cols=85 Identities=11% Similarity=0.101 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHhCCceeec--CCCCchHHHHHhhhhhcCCCceeEeecccccCCChhHHHHHHHHhh------hh---
Q 025622 156 QELIEILSYALVITKNHIYTS--GASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKT------VI--- 224 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS--GA~GtNaAvIRGalrae~P~lLTViLPQSL~kQp~Es~elLe~V~~------lv--- 224 (250)
.+.++++-.++...|..|++. |.-|..++ ..+-+. .-+...|-++... . -.-|.|++.+. ++
T Consensus 81 t~al~~~~~~~~~~gd~vi~~~~~~~~~~~~--~~~~~~-g~~~~~v~~~~~~---~-~d~~~l~~~~~~~~~~v~~~~~ 153 (376)
T 3f0h_A 81 TGSMEAVVMNCFTKKDKVLVIDGGSFGHRFV--QLCEIH-EIPYVALKLEHGK---K-LTKEKLYEYDNQNFTGLLVNVD 153 (376)
T ss_dssp HHHHHHHHHHHCCTTCCEEEEESSHHHHHHH--HHHHHT-TCCEEEEECCTTC---C-CCHHHHHTTTTSCCCEEEEESE
T ss_pred hHHHHHHHHhccCCCCeEEEEeCChhhHHHH--HHHHHc-CCceEEEeCCCCC---C-CCHHHHHHhhccCceEEEEecc
Confidence 366777778887778777655 33342221 111111 2233333333211 0 11233333221 22
Q ss_pred cCCCCCCCChHHHhhhhhhhhhc
Q 025622 225 EKPHNDHLPLIEASRYTISFAFF 247 (250)
Q Consensus 225 E~penD~LpL~eAS~lCns~~~~ 247 (250)
++|...-+|+.+-..+|...-.+
T Consensus 154 ~nptG~~~~l~~i~~l~~~~~~~ 176 (376)
T 3f0h_A 154 ETSTAVLYDTMMIGEFCKKNNMF 176 (376)
T ss_dssp ETTTTEECCHHHHHHHHHHTTCE
T ss_pred cCCcceecCHHHHHHHHHHcCCE
Confidence 45566677888888888765443
No 116
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=27.44 E-value=51 Score=26.64 Aligned_cols=22 Identities=14% Similarity=0.042 Sum_probs=10.7
Q ss_pred hhcCCCCC---CCChH---HHhhhhhhh
Q 025622 223 VIEKPHND---HLPLI---EASRYTISF 244 (250)
Q Consensus 223 lvE~penD---~LpL~---eAS~lCns~ 244 (250)
++..|+|- -+|.. +-..+|...
T Consensus 177 ~~~~p~nptG~~~~~~~l~~l~~~~~~~ 204 (396)
T 2q7w_A 177 FHGCCHNPTGIDPTLEQWQTLAQLSVEK 204 (396)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHHC
Confidence 34666653 34433 345566543
No 117
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=27.43 E-value=1.8e+02 Score=22.14 Aligned_cols=35 Identities=6% Similarity=-0.190 Sum_probs=20.9
Q ss_pred HHhcCCceEEEecccccchhHHHHHHHHHHHHHHhC
Q 025622 135 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK 170 (250)
Q Consensus 135 IQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~g 170 (250)
+-+.|.|+||+++...- ..+++-.+=...+|...|
T Consensus 132 L~~~G~~~i~~i~~~~~-~~~~~R~~gf~~~l~~~g 166 (298)
T 3tb6_A 132 LLSLGHTHMMGIFKADD-TQGVKRMNGFIQAHRERE 166 (298)
T ss_dssp HHHTTCCSEEEEEESSS-HHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCCcEEEEcCCCC-ccHHHHHHHHHHHHHHcC
Confidence 44569999999976554 344444454445555443
No 118
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=27.30 E-value=46 Score=27.21 Aligned_cols=33 Identities=12% Similarity=0.198 Sum_probs=24.1
Q ss_pred cchhHHHHHHHHHHHHHHhCCceeecCCCCchH
Q 025622 151 MGFMHQELIEILSYALVITKNHIYTSGASGTNA 183 (250)
Q Consensus 151 v~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNa 183 (250)
+|=-...|.|.+..|+...-.-|+|||++|...
T Consensus 71 v~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 71 VEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp ECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred eCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 333456777888877755567899999999754
No 119
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=27.22 E-value=39 Score=27.69 Aligned_cols=23 Identities=17% Similarity=0.239 Sum_probs=13.2
Q ss_pred hhcCCCCC---CCC---hHHHhhhhhhhh
Q 025622 223 VIEKPHND---HLP---LIEASRYTISFA 245 (250)
Q Consensus 223 lvE~penD---~Lp---L~eAS~lCns~~ 245 (250)
+|+.|+|- -+| +.+-..+|...-
T Consensus 179 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~ 207 (422)
T 3fvs_A 179 VLNTPNNPLGKVFSREELELVASLCQQHD 207 (422)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHT
T ss_pred EECCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 46677663 243 566667776543
No 120
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=26.92 E-value=2.8e+02 Score=23.28 Aligned_cols=92 Identities=16% Similarity=0.136 Sum_probs=54.2
Q ss_pred eeecccccCCChh--HHHHHHH-HHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhCCceeecCCCCchHHH--HH
Q 025622 115 VMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNHIYTSGASGTNAAV--IR 187 (250)
Q Consensus 115 v~~~~~~~~p~vD--~lqELaa-IQq~g~rrIa~lGsR--hv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAv--IR 187 (250)
..+.+++.--++| -++++.. +-+.|-.-|.++||- -.-..+.+-.+++..+.-..+.-|+-.|+..|.-++ .|
T Consensus 6 a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~gViaGvg~~~t~~ai~la~ 85 (288)
T 2nuw_A 6 PIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHKLIFQVGSLNLNDVMELVK 85 (288)
T ss_dssp ECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSCEEEECCCSCHHHHHHHHH
T ss_pred eeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCeEEeeCCCCHHHHHHHHH
Confidence 3445554322355 4555555 446899999999984 455667777777777765544444455555555543 33
Q ss_pred hhhhhcCCCceeEeecccccC
Q 025622 188 GALRAERPDLLTVILPQSLKK 208 (250)
Q Consensus 188 Galrae~P~lLTViLPQSL~k 208 (250)
-|-++ ..+-+-|+-|- ..|
T Consensus 86 ~A~~~-Gadavlv~~P~-y~~ 104 (288)
T 2nuw_A 86 FSNEM-DILGVSSHSPY-YFP 104 (288)
T ss_dssp HHHTS-CCSEEEECCCC-SSC
T ss_pred HHHhc-CCCEEEEcCCc-CCC
Confidence 34443 56766666554 444
No 121
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=26.90 E-value=38 Score=28.36 Aligned_cols=24 Identities=13% Similarity=0.105 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHhCC----ceeecCC
Q 025622 155 HQELIEILSYALVITKN----HIYTSGA 178 (250)
Q Consensus 155 hq~LIEllsyAlvl~gn----~i~TSGA 178 (250)
-++.+.++..++...|. +|++.-=
T Consensus 100 ~~~al~~~~~~l~~~Gd~~~~~Vlv~~P 127 (391)
T 3bwn_A 100 STQLCQAAVHALSSLARSQPVSVVAAAP 127 (391)
T ss_dssp HHHHHHHHHHHHHHTSSSSSEEEEECSS
T ss_pred hHHHHHHHHHHhcCCCCCCcceEEEcCC
Confidence 36677777777777776 6666543
No 122
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=26.69 E-value=51 Score=27.58 Aligned_cols=87 Identities=11% Similarity=0.041 Sum_probs=57.1
Q ss_pred hhHHHHHHHHHhcCCceEEEecccccchhHHHHHHHHH------------------HHHHHhCCceeecCCCCchHHHHH
Q 025622 126 VDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILS------------------YALVITKNHIYTSGASGTNAAVIR 187 (250)
Q Consensus 126 vD~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIElls------------------yAlvl~gn~i~TSGA~GtNaAvIR 187 (250)
.|+++=|...++.+ ++||++|-.|+..--..+-+++. ..+...|-.++--|+..++.|-=
T Consensus 93 ~Dil~aL~~a~~~~-~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~~vVVG~~~~~~~A~~- 170 (225)
T 2pju_A 93 YDVLQFLAKAGKLT-SSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEE- 170 (225)
T ss_dssp HHHHHHHHHTTCTT-SCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEESHHHHHHHHH-
T ss_pred HHHHHHHHHHHhhC-CcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHH-
Confidence 58999999998877 58999999998766554444443 34556777777777766666633
Q ss_pred hhhhhcCCCceeEeecccccCCChhHHHHHHHHhhhhcC
Q 025622 188 GALRAERPDLLTVILPQSLKKQPPESQELLAKVKTVIEK 226 (250)
Q Consensus 188 Galrae~P~lLTViLPQSL~kQp~Es~elLe~V~~lvE~ 226 (250)
-.+=.|++- | + .-.++-+++-+++.+.
T Consensus 171 -------~Gl~~vlI~-s--~--eSI~~Ai~eA~~l~~~ 197 (225)
T 2pju_A 171 -------AGMTGIFIY-S--A--ATVRQAFSDALDMTRM 197 (225)
T ss_dssp -------TTSEEEESS-C--H--HHHHHHHHHHHHHHHH
T ss_pred -------cCCcEEEEC-C--H--HHHHHHHHHHHHHHHH
Confidence 334445554 4 1 4456666666666554
No 123
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=26.58 E-value=52 Score=28.23 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=25.6
Q ss_pred hCCceeecCCCCchHHHH---HhhhhhcCCCceeEeeccc
Q 025622 169 TKNHIYTSGASGTNAAVI---RGALRAERPDLLTVILPQS 205 (250)
Q Consensus 169 ~gn~i~TSGA~GtNaAvI---RGalrae~P~lLTViLPQS 205 (250)
-||-++-.|+.|..-|++ ++|||+ -..++||..|++
T Consensus 30 ~G~vlvigGs~~~~GA~~laa~aAlr~-GaGlv~~~~~~~ 68 (279)
T 3rpz_A 30 YGTALLLAGSDDMPGAALLAGLGAMRS-GLGKLVIGTSEN 68 (279)
T ss_dssp GCEEEEECCBTTBCHHHHHHHHHHHTT-TCSEEEEEECTT
T ss_pred CCEEEEEeCCCCCCcHHHHHHHHHHHh-CCCeEEEEecHH
Confidence 466666677766555554 788888 888888887775
No 124
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=26.52 E-value=33 Score=28.38 Aligned_cols=25 Identities=4% Similarity=-0.028 Sum_probs=16.9
Q ss_pred hhcCCCCCCCChHHHhhhhhhhhhc
Q 025622 223 VIEKPHNDHLPLIEASRYTISFAFF 247 (250)
Q Consensus 223 lvE~penD~LpL~eAS~lCns~~~~ 247 (250)
+++.|...-.++.+-.++|.....+
T Consensus 127 ~~~~~~G~~~~l~~i~~l~~~~~~~ 151 (394)
T 1o69_A 127 ILTHLYGNAAKMDEIVEICKENDIV 151 (394)
T ss_dssp EEECGGGCCCCHHHHHHHHHHTTCE
T ss_pred EEECCCCChhhHHHHHHHHHHcCCE
Confidence 3456666777888888888765433
No 125
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=26.37 E-value=35 Score=28.54 Aligned_cols=21 Identities=5% Similarity=0.020 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHhCCceeec
Q 025622 156 QELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (250)
++.++++..++...|.+|++.
T Consensus 118 ~~al~~~~~~l~~~gd~Vlv~ 138 (425)
T 2r2n_A 118 QQGLCKVFEMIINPGDNVLLD 138 (425)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEe
Confidence 566777777766666666554
No 126
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=26.31 E-value=35 Score=27.86 Aligned_cols=24 Identities=0% Similarity=-0.205 Sum_probs=16.8
Q ss_pred hcCCCCCCCChHHHhhhhhhhhhc
Q 025622 224 IEKPHNDHLPLIEASRYTISFAFF 247 (250)
Q Consensus 224 vE~penD~LpL~eAS~lCns~~~~ 247 (250)
+.+|...-.++.+-..+|.....+
T Consensus 150 ~~n~tG~~~~~~~i~~l~~~~~~~ 173 (391)
T 3dr4_A 150 PVHLYGQICDMDPILEVARRHNLL 173 (391)
T ss_dssp CBCGGGCCCCHHHHHHHHHHTTCE
T ss_pred EECCCCChhhHHHHHHHHHHcCCE
Confidence 456666677888888888765433
No 127
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=26.26 E-value=3e+02 Score=23.38 Aligned_cols=98 Identities=21% Similarity=0.337 Sum_probs=60.1
Q ss_pred hhhhcccceeeecccccCCChh--HHHHHHH-HHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhCCc---eeecC
Q 025622 106 QSVVEGSGAVMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNH---IYTSG 177 (250)
Q Consensus 106 ~~vv~g~~~v~~~~~~~~p~vD--~lqELaa-IQq~g~rrIa~lGsR--hv~~~hq~LIEllsyAlvl~gn~---i~TSG 177 (250)
.-.++|.-...+.++. =-++| -+++|.. +-+.|-.-|.++||- -.-..+.+-.+++..+.-..+.+ |+-.|
T Consensus 11 ~~~~~Gv~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg 89 (306)
T 1o5k_A 11 HHMFRGVGTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG 89 (306)
T ss_dssp -CCCSEEEEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC
T ss_pred hcccCCeeeeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC
Confidence 3456777777777776 33366 4555555 446899999999984 44456666666666665444443 44555
Q ss_pred CCCchHHH--HHhhhhhcCCCceeEeeccc
Q 025622 178 ASGTNAAV--IRGALRAERPDLLTVILPQS 205 (250)
Q Consensus 178 A~GtNaAv--IRGalrae~P~lLTViLPQS 205 (250)
+..|.-++ .|-|-++ ..+-+-|+-|--
T Consensus 90 ~~st~~ai~la~~A~~~-Gadavlv~~P~y 118 (306)
T 1o5k_A 90 TNSTEKTLKLVKQAEKL-GANGVLVVTPYY 118 (306)
T ss_dssp CSCHHHHHHHHHHHHHH-TCSEEEEECCCS
T ss_pred CccHHHHHHHHHHHHhc-CCCEEEECCCCC
Confidence 55565554 4444444 677777776654
No 128
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=26.22 E-value=42 Score=27.10 Aligned_cols=21 Identities=24% Similarity=0.186 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHhCCceeec
Q 025622 156 QELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (250)
++.++++..++...|.+|++.
T Consensus 97 ~~a~~~~~~~l~~~gd~vl~~ 117 (376)
T 2dou_A 97 QEGLAHLLLALTEPEDLLLLP 117 (376)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEC
Confidence 566677766665556666654
No 129
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=26.22 E-value=26 Score=28.99 Aligned_cols=21 Identities=10% Similarity=-0.080 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHhCCceeec
Q 025622 156 QELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (250)
.+.++++..++...|.+|++.
T Consensus 111 ~~a~~~~~~~~~~~gd~Vl~~ 131 (429)
T 1yiz_A 111 YEALYATIQGHVDEGDEVIII 131 (429)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEc
Confidence 566777777776666666554
No 130
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=26.19 E-value=3e+02 Score=23.33 Aligned_cols=96 Identities=19% Similarity=0.274 Sum_probs=56.8
Q ss_pred cccceeeecccccCCChh--HHHHHHH-HHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhCCc---eeecCCCCc
Q 025622 110 EGSGAVMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNH---IYTSGASGT 181 (250)
Q Consensus 110 ~g~~~v~~~~~~~~p~vD--~lqELaa-IQq~g~rrIa~lGsR--hv~~~hq~LIEllsyAlvl~gn~---i~TSGA~Gt 181 (250)
+|.-...+.+|..=-++| -+++|.. +-+.|-.-|.++||- -.-..+.+-.+++..+.-..+.+ |+-.|+..|
T Consensus 14 ~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t 93 (301)
T 1xky_A 14 GTIATAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNT 93 (301)
T ss_dssp CSEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCH
T ss_pred CceEEeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCH
Confidence 344455566665422355 4555555 446899999999984 44456666666666666544443 445555566
Q ss_pred hHHH--HHhhhhhcCCCceeEeecccc
Q 025622 182 NAAV--IRGALRAERPDLLTVILPQSL 206 (250)
Q Consensus 182 NaAv--IRGalrae~P~lLTViLPQSL 206 (250)
..|+ .|-|-++ ..+-+-|+-|--.
T Consensus 94 ~~ai~la~~A~~~-Gadavlv~~P~y~ 119 (301)
T 1xky_A 94 HASIDLTKKATEV-GVDAVMLVAPYYN 119 (301)
T ss_dssp HHHHHHHHHHHHT-TCSEEEEECCCSS
T ss_pred HHHHHHHHHHHhc-CCCEEEEcCCCCC
Confidence 5554 3444444 6677777777543
No 131
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=26.18 E-value=34 Score=27.63 Aligned_cols=25 Identities=12% Similarity=-0.065 Sum_probs=16.5
Q ss_pred hhcCCCC---CCCChHHHhhhhhhhhhc
Q 025622 223 VIEKPHN---DHLPLIEASRYTISFAFF 247 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~~~~ 247 (250)
+++.|+| .-+|+.+-..+|.....+
T Consensus 174 ~~~~~~nptG~~~~l~~i~~l~~~~~~~ 201 (420)
T 1t3i_A 174 TVVHISNTLGCVNPAEEIAQLAHQAGAK 201 (420)
T ss_dssp EEESBCTTTCBBCCHHHHHHHHHHTTCE
T ss_pred EEeCCcccccCcCCHHHHHHHHHHcCCE
Confidence 4566654 457788888888765443
No 132
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=26.12 E-value=1.6e+02 Score=25.62 Aligned_cols=69 Identities=22% Similarity=0.269 Sum_probs=41.7
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHHhCCceeecCCCC---------------chHHHHHhhhhhcCCCceeEeecc
Q 025622 140 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASG---------------TNAAVIRGALRAERPDLLTVILPQ 204 (250)
Q Consensus 140 ~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~G---------------tNaAvIRGalrae~P~lLTViLPQ 204 (250)
.++|||+|.-+||- -|+.+|...|+.|+-..-+- .+..+++.| +++.|++-+-+|
T Consensus 8 ~~kIgIIG~G~mG~-------slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a--~~~aDlVilavP- 77 (341)
T 3ktd_A 8 SRPVCILGLGLIGG-------SLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRA--AAEDALIVLAVP- 77 (341)
T ss_dssp SSCEEEECCSHHHH-------HHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHH--HHTTCEEEECSC-
T ss_pred CCEEEEEeecHHHH-------HHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhc--ccCCCEEEEeCC-
Confidence 46899999887774 35666677788776544321 112233333 235688877777
Q ss_pred cccCCChhHHHHHHHHhhh
Q 025622 205 SLKKQPPESQELLAKVKTV 223 (250)
Q Consensus 205 SL~kQp~Es~elLe~V~~l 223 (250)
+....+.++++..+
T Consensus 78 -----~~~~~~vl~~l~~~ 91 (341)
T 3ktd_A 78 -----MTAIDSLLDAVHTH 91 (341)
T ss_dssp -----HHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHcc
Confidence 23556677766654
No 133
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=26.09 E-value=2.9e+02 Score=23.17 Aligned_cols=95 Identities=21% Similarity=0.221 Sum_probs=53.5
Q ss_pred cccceeeecccccCCChh--HHHHHHH-HHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhCCc---eeecCCCCc
Q 025622 110 EGSGAVMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNH---IYTSGASGT 181 (250)
Q Consensus 110 ~g~~~v~~~~~~~~p~vD--~lqELaa-IQq~g~rrIa~lGsR--hv~~~hq~LIEllsyAlvl~gn~---i~TSGA~Gt 181 (250)
+|.-.....++..=-++| -++++.. +-+.|-.-|.++||- -.-..+.+-.+++..+.-..+.+ |+-.|+..|
T Consensus 3 ~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t 82 (292)
T 2ojp_A 3 TGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANAT 82 (292)
T ss_dssp CEEEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSH
T ss_pred CceeeeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccH
Confidence 344445556665322355 4555555 446899999999984 44455666666666665444443 344455555
Q ss_pred hHHH--HHhhhhhcCCCceeEeeccc
Q 025622 182 NAAV--IRGALRAERPDLLTVILPQS 205 (250)
Q Consensus 182 NaAv--IRGalrae~P~lLTViLPQS 205 (250)
.-++ .|-|-++ ..+-+-|+-|--
T Consensus 83 ~~ai~la~~a~~~-Gadavlv~~P~y 107 (292)
T 2ojp_A 83 AEAISLTQRFNDS-GIVGCLTVTPYY 107 (292)
T ss_dssp HHHHHHHHHTTTS-SCSEEEEECCCS
T ss_pred HHHHHHHHHHHhc-CCCEEEECCCCC
Confidence 5443 3333333 567776665644
No 134
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=25.96 E-value=33 Score=28.29 Aligned_cols=21 Identities=19% Similarity=0.128 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHhCCceeec
Q 025622 156 QELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (250)
.+.++++..++...|.+|++.
T Consensus 109 ~~a~~~~~~~~~~~gd~Vl~~ 129 (412)
T 2x5d_A 109 KEGLAHLMLATLDHGDTILVP 129 (412)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEc
Confidence 455566655555455555443
No 135
>1v9v_A KIAA0561 protein; helix bundle, MAST205, microtubule-associated serine/threonine protein kinase, structural genomics; NMR {Homo sapiens} SCOP: a.29.10.1
Probab=25.92 E-value=16 Score=29.39 Aligned_cols=42 Identities=21% Similarity=0.381 Sum_probs=31.8
Q ss_pred HHhcCCceEEEecccccchhHHHHHHHHHHHHHHhCCceeec
Q 025622 135 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 135 IQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TS 176 (250)
|....+....=++.--..|+|-|+||+-.-.|-.+..-+|||
T Consensus 22 i~~~~~~~~~~laDgvl~FiHHQiiElARDCL~KSr~~LITs 63 (114)
T 1v9v_A 22 LTAYAPGARLALADGVLGFIHHQIVELARDCLAKSGENLVTS 63 (114)
T ss_dssp HHHSCBTTTBCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCCH
T ss_pred HHhcCccccccchHHHHHHHHHHHHHHHHHHHHHHHccchHH
Confidence 444555555555666678999999999988888887778886
No 136
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=25.75 E-value=47 Score=26.57 Aligned_cols=32 Identities=19% Similarity=0.159 Sum_probs=22.5
Q ss_pred cCCceEEEecccccchhHHHHHHHHHHHHHHhCCceeec
Q 025622 138 QGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 138 ~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TS 176 (250)
-..++|||+|.-+|+- -|+..|+..||.|+-.
T Consensus 17 ~~~~kIgiIG~G~mG~-------alA~~L~~~G~~V~~~ 48 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGR-------TMAGALADLGHEVTIG 48 (245)
T ss_dssp --CCEEEEECCSHHHH-------HHHHHHHHTTCEEEEE
T ss_pred cCCCeEEEECCCHHHH-------HHHHHHHHCCCEEEEE
Confidence 3468999999988874 3566677778877643
No 137
>2nap_A Protein (periplasmic nitrate reductase); nitrogenous acceptor, dissimilatory nitrate reductase; HET: MGD MES; 1.90A {Desulfovibrio desulfuricans} SCOP: b.52.2.2 c.81.1.1 PDB: 2jim_A* 2jir_A* 2jip_A* 2v45_A* 2v3v_A* 2jiq_A* 2jio_A*
Probab=25.74 E-value=1.1e+02 Score=28.43 Aligned_cols=34 Identities=18% Similarity=0.424 Sum_probs=24.2
Q ss_pred ccccCCC---hh-HHHHHHHHHh-cCCceEEEecccccc
Q 025622 119 EFKPVPD---VD-YLQELLAIQQ-QGPRAIGFFGTRNMG 152 (250)
Q Consensus 119 ~~~~~p~---vD-~lqELaaIQq-~g~rrIa~lGsRhv~ 152 (250)
+++++.= +| +++.|..|++ .|+..|+++|+....
T Consensus 75 ~~~~isWdeAl~~ia~~l~~~~~~~G~~~i~~~~~~~~~ 113 (723)
T 2nap_A 75 KLEPVSWDEALDLMASRFRSSIDMYGPNSVAWYGSGQCL 113 (723)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTSC
T ss_pred CEEEecHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCccc
Confidence 3555552 56 6678888775 599999999886554
No 138
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=25.57 E-value=30 Score=28.91 Aligned_cols=38 Identities=21% Similarity=0.161 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHHH--HhCCceeecCCCCchHHHHHhhhh
Q 025622 154 MHQELIEILSYALV--ITKNHIYTSGASGTNAAVIRGALR 191 (250)
Q Consensus 154 ~hq~LIEllsyAlv--l~gn~i~TSGA~GtNaAvIRGalr 191 (250)
.+.+|.|.++.-+- ...+-++|+|++..|.++|+.+..
T Consensus 87 ~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~ 126 (439)
T 3dxv_A 87 PAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVK 126 (439)
T ss_dssp HHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHH
Confidence 45555555554331 114667777777777777776644
No 139
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=25.54 E-value=25 Score=29.16 Aligned_cols=85 Identities=9% Similarity=-0.019 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhh-hcCCCceeEeecc-cccCCChhHHHHHHH----Hh-hhhcCCC
Q 025622 156 QELIEILSYALVITKNHIYTSGASGTNAAVIRGALR-AERPDLLTVILPQ-SLKKQPPESQELLAK----VK-TVIEKPH 228 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalr-ae~P~lLTViLPQ-SL~kQp~Es~elLe~----V~-~lvE~pe 228 (250)
++.++++..++...|.+|++.-- +-.....++.. . .-+...|-+.. ...-.+.+-.+.|++ .. =+|..|+
T Consensus 123 ~~al~~~~~~l~~~gd~Vl~~~p--~y~~~~~~~~~~~-g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~ 199 (430)
T 2x5f_A 123 THGLSLVGDLFVNQDDTILLPEH--NWGNYKLVFNTRN-GANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPN 199 (430)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESS--CCTHHHHHHTTTT-CCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSC
T ss_pred hHHHHHHHHHHhCCCCEEEEcCC--cCccHHHHHHHhc-CCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCC
Confidence 67888888888777777776532 22222333322 2 32333322221 111123444445543 11 2557775
Q ss_pred CC---CCC---hHHHhhhhhh
Q 025622 229 ND---HLP---LIEASRYTIS 243 (250)
Q Consensus 229 nD---~Lp---L~eAS~lCns 243 (250)
|- -+| +.+-..+|..
T Consensus 200 nptG~~~~~~~l~~i~~~~~~ 220 (430)
T 2x5f_A 200 NPTGYTPTHKEVTTIVEAIKA 220 (430)
T ss_dssp TTTCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHh
Confidence 53 456 6666777765
No 140
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=25.49 E-value=25 Score=28.74 Aligned_cols=43 Identities=5% Similarity=0.022 Sum_probs=22.7
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHhCCceeec
Q 025622 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 128 ~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TS 176 (250)
+.++|+..-...+..|.+..+ -++.++++..++...|.+|++.
T Consensus 79 l~~~la~~~g~~~~~v~~~~g------~~~al~~~~~~~~~~gd~Vl~~ 121 (397)
T 2zyj_A 79 LRAFVAEWIGVRPEEVLITTG------SQQALDLVGKVFLDEGSPVLLE 121 (397)
T ss_dssp HHHHHHHHHTSCGGGEEEESH------HHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHhCCChhhEEEecc------HHHHHHHHHHHhCCCCCEEEEe
Confidence 555555554222334443321 3566777777766666666654
No 141
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=25.49 E-value=71 Score=25.88 Aligned_cols=22 Identities=0% Similarity=-0.189 Sum_probs=13.7
Q ss_pred CCCCCCCChHHHhhhhhhhhhc
Q 025622 226 KPHNDHLPLIEASRYTISFAFF 247 (250)
Q Consensus 226 ~penD~LpL~eAS~lCns~~~~ 247 (250)
+|...-.++.+-..+|.....+
T Consensus 134 n~tG~~~~l~~i~~la~~~~~~ 155 (388)
T 1b9h_A 134 HMAGLMADMDALAKISADTGVP 155 (388)
T ss_dssp CGGGCCCCHHHHHHHHHHHTCC
T ss_pred CCccCcCCHHHHHHHHHHcCCE
Confidence 3334456778888888765433
No 142
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=25.38 E-value=32 Score=27.83 Aligned_cols=43 Identities=14% Similarity=0.088 Sum_probs=21.3
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHhCCceeec
Q 025622 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 128 ~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TS 176 (250)
+.+.|+..-...+..|.|..+ -.+.++++..++...|.+|++.
T Consensus 66 l~~~la~~~~~~~~~v~~~~g------~~~a~~~~~~~~~~~gd~Vl~~ 108 (381)
T 1v2d_A 66 LREALAEEFAVEPESVVVTSG------ATEALYVLLQSLVGPGDEVVVL 108 (381)
T ss_dssp HHHHHHHHHTSCGGGEEEESS------HHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHhcCCChhhEEEcCC------hHHHHHHHHHHhCCCCCEEEEc
Confidence 555555553333334433322 2455666666665555555544
No 143
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=25.31 E-value=37 Score=27.63 Aligned_cols=23 Identities=0% Similarity=-0.117 Sum_probs=14.9
Q ss_pred hcCCCCCCCChHHHhhhhhhhhh
Q 025622 224 IEKPHNDHLPLIEASRYTISFAF 246 (250)
Q Consensus 224 vE~penD~LpL~eAS~lCns~~~ 246 (250)
+++|...-.++.+-..+|.....
T Consensus 129 ~~~~~G~~~~~~~i~~la~~~~~ 151 (367)
T 3nyt_A 129 PVSLYGQCADFDAINAIASKYGI 151 (367)
T ss_dssp CBCGGGCCCCHHHHHHHHHHTTC
T ss_pred eeCCccChhhHHHHHHHHHHcCC
Confidence 45555566677777778876543
No 144
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=25.28 E-value=33 Score=28.48 Aligned_cols=21 Identities=0% Similarity=0.037 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHhCCceeec
Q 025622 156 QELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (250)
++.++++..++...|.+|++.
T Consensus 119 ~~al~~~~~~l~~~gd~Vl~~ 139 (404)
T 2o1b_A 119 KNGLVAVPTCVINPGDYVLLP 139 (404)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEc
Confidence 455666666665555555543
No 145
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=25.22 E-value=31 Score=27.69 Aligned_cols=24 Identities=0% Similarity=-0.089 Sum_probs=15.5
Q ss_pred hcCCCCCCCChHHHhhhhhhhhhc
Q 025622 224 IEKPHNDHLPLIEASRYTISFAFF 247 (250)
Q Consensus 224 vE~penD~LpL~eAS~lCns~~~~ 247 (250)
+.+|...-.++.+-..+|.....+
T Consensus 131 ~~n~~G~~~~~~~i~~~~~~~~~~ 154 (374)
T 3uwc_A 131 PVHYTGNIADMPALAKIAKKHNLH 154 (374)
T ss_dssp CBCGGGCCCCHHHHHHHHHHTTCE
T ss_pred EeCCcCCcCCHHHHHHHHHHcCCE
Confidence 344555667788888888765443
No 146
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=25.14 E-value=34 Score=27.63 Aligned_cols=106 Identities=8% Similarity=-0.023 Sum_probs=50.2
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHH-HHhCCceeecCCCCchHHHHHhhhhhcCCCceeEeecccc
Q 025622 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAL-VITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSL 206 (250)
Q Consensus 128 ~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAl-vl~gn~i~TSGA~GtNaAvIRGalrae~P~lLTViLPQSL 206 (250)
+-++|+..- |.+.|.+.++ -.+.++++..++ ...|..|+++.-+ -.+++..+ +...-+.. .+|-.-
T Consensus 44 l~~~la~~~--~~~~~~~~~~------gt~al~~~~~~~~~~~gd~Vl~~~~~--~~~~~~~~-~~~g~~~~--~v~~~~ 110 (393)
T 1mdo_A 44 LEAAFCRLT--GNQYAVAVSS------ATAGMHIALMALGIGEGDEVITPSMT--WVSTLNMI-VLLGANPV--MVDVDR 110 (393)
T ss_dssp HHHHHHHHH--CCSEEEEESC------HHHHHHHHHHHTTCCTTCEEEEESSS--CHHHHHHH-HHTTCEEE--EECBCT
T ss_pred HHHHHHHHh--CCCcEEEecC------hHHHHHHHHHHcCCCCCCEEEeCCCc--cHhHHHHH-HHCCCEEE--EEeccC
Confidence 445555543 3345555443 256677777777 5666666665322 22222222 22122222 233110
Q ss_pred cCCChhHHHHHHHHhh------hhcCCCCCCCChHHHhhhhhhhhhc
Q 025622 207 KKQPPESQELLAKVKT------VIEKPHNDHLPLIEASRYTISFAFF 247 (250)
Q Consensus 207 ~kQp~Es~elLe~V~~------lvE~penD~LpL~eAS~lCns~~~~ 247 (250)
+.... .-+.|++.+. ++++|...-.++.+-..+|.....+
T Consensus 111 ~~~~~-d~~~l~~~l~~~~~~v~~~~~~G~~~~~~~i~~l~~~~~~~ 156 (393)
T 1mdo_A 111 DTLMV-TPEHIEAAITPQTKAIIPVHYAGAPADLDAIYALGERYGIP 156 (393)
T ss_dssp TTCCB-CHHHHHHHCCTTEEEECCBCGGGCCCCHHHHHHHHHHHTCC
T ss_pred CcCCC-CHHHHHHhcCCCceEEEEeCCCCCcCCHHHHHHHHHHcCCe
Confidence 00001 1223333221 3456766677888888888765443
No 147
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=24.95 E-value=25 Score=29.85 Aligned_cols=23 Identities=22% Similarity=0.426 Sum_probs=12.6
Q ss_pred hhcCCCCC---CCC---hHHHhhhhhhhh
Q 025622 223 VIEKPHND---HLP---LIEASRYTISFA 245 (250)
Q Consensus 223 lvE~penD---~Lp---L~eAS~lCns~~ 245 (250)
+|+.|+|- -+| +.+-..+|...-
T Consensus 206 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~ 234 (447)
T 3b46_A 206 IINTPHNPIGKVFTREELTTLGNICVKHN 234 (447)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTT
T ss_pred EEeCCCCCCCcccCHHHHHHHHHHHHHcC
Confidence 45677663 333 555566676543
No 148
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=24.88 E-value=37 Score=27.54 Aligned_cols=21 Identities=19% Similarity=0.086 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHhCCceeec
Q 025622 156 QELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (250)
++.++++..++...|.+|++.
T Consensus 101 ~~a~~~~~~~~~~~gd~vl~~ 121 (386)
T 1u08_A 101 TEALYAAITALVRNGDEVICF 121 (386)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEe
Confidence 556666666665556555544
No 149
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=24.87 E-value=32 Score=28.06 Aligned_cols=25 Identities=20% Similarity=0.234 Sum_probs=17.8
Q ss_pred hhcCCCC---CCCChHHHhhhhhhhhhc
Q 025622 223 VIEKPHN---DHLPLIEASRYTISFAFF 247 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~~~~ 247 (250)
+++.|.| .-+|+.+-..+|.....+
T Consensus 183 ~~~~~~nptG~~~~l~~i~~l~~~~~~~ 210 (401)
T 2bwn_A 183 AFESVYSMDGDFGPIKEICDIAEEFGAL 210 (401)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHHHHTCE
T ss_pred EEecCcCCCCCcCCHHHHHHHHHHcCCE
Confidence 4666665 458899999999875443
No 150
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=24.87 E-value=79 Score=27.46 Aligned_cols=37 Identities=14% Similarity=0.091 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHH-HhCCceeecCCCCchHHHHHhhhh
Q 025622 155 HQELIEILSYALV-ITKNHIYTSGASGTNAAVIRGALR 191 (250)
Q Consensus 155 hq~LIEllsyAlv-l~gn~i~TSGA~GtNaAvIRGalr 191 (250)
+.+|-|.|+.-+- -..+-++|+|++-.|-++||.+..
T Consensus 120 ~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~ 157 (457)
T 3tfu_A 120 AARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQ 157 (457)
T ss_dssp HHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHH
Confidence 3445554443321 123567888888888888887765
No 151
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=24.73 E-value=46 Score=25.98 Aligned_cols=51 Identities=14% Similarity=0.216 Sum_probs=30.0
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHH-HhCCceeecCCCCchH
Q 025622 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALV-ITKNHIYTSGASGTNA 183 (250)
Q Consensus 128 ~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlv-l~gn~i~TSGA~GtNa 183 (250)
++.++ +++.|-..+. ...+|=-...|.|.+..|+. ..-.-|+|||++|...
T Consensus 35 ~l~~~--L~~~G~~v~~---~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~ 86 (169)
T 1y5e_A 35 LLHEL--LKEAGHKVTS---YEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGITK 86 (169)
T ss_dssp HHHHH--HHHHTCEEEE---EEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSST
T ss_pred HHHHH--HHHCCCeEeE---EEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCC
Confidence 55544 3445654221 12233334667777777765 2457899999999763
No 152
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=24.62 E-value=35 Score=26.83 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=14.9
Q ss_pred hhcCCCC---CCCChHHHhhhhhhh
Q 025622 223 VIEKPHN---DHLPLIEASRYTISF 244 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~ 244 (250)
++..|+| .-+|+.+-.++|...
T Consensus 140 ~i~~p~nptG~~~~~~~l~~l~~~~ 164 (337)
T 3p1t_A 140 VLANPSNPTGQALSAGELDQLRQRA 164 (337)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHC
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhC
Confidence 4555655 568888888887643
No 153
>3dvo_A Sgrair restriction enzyme; restriction enzyme/DNA complex; HET: DNA; 1.89A {Streptomyces griseus} PDB: 3dpg_A* 3dw9_A* 3mq6_A* 3mqy_A* 3n78_A* 3n7b_A*
Probab=24.62 E-value=1.5e+02 Score=27.55 Aligned_cols=70 Identities=26% Similarity=0.376 Sum_probs=53.5
Q ss_pred CceEEEec-ccccchh------HHHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccC----
Q 025622 140 PRAIGFFG-TRNMGFM------HQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKK---- 208 (250)
Q Consensus 140 ~rrIa~lG-sRhv~~~------hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~P~lLTViLPQSL~k---- 208 (250)
-|+||++- -|-.-+. -+..||-+..+|-..|=.++|| .||++-|.+|.-|..
T Consensus 141 ~r~vAvl~LPr~fD~~kLf~~e~re~i~~le~~L~k~Gv~LitS-----------------nPDlviVr~pd~l~n~~~~ 203 (338)
T 3dvo_A 141 RRQVAVLNLPRSFDWVSLLVPESQEVIEEFRAGLRKDGLGLPTS-----------------TPDLAVVVLPEEFQNDEMW 203 (338)
T ss_dssp GGCEEEEECCTTCCGGGGBCHHHHHHHHHHHHHHHHTTCBCCCC-----------------CCSEEEEECCGGGTTCGGG
T ss_pred cceeEEEECCCccchhhhhhHHHHHHHHHHHHHHHhhceecccC-----------------CCCEEEEeCCccccChhhh
Confidence 37788882 2222222 4788999999999999999999 999999999866554
Q ss_pred ------CChhHHHHHHHHhhhhcC
Q 025622 209 ------QPPESQELLAKVKTVIEK 226 (250)
Q Consensus 209 ------Qp~Es~elLe~V~~lvE~ 226 (250)
-.+|.+..|+..-+.+|.
T Consensus 204 ~ePI~kLt~eN~~~L~t~yq~leg 227 (338)
T 3dvo_A 204 REEIAGLTRPNQILLSGAYQRLQG 227 (338)
T ss_dssp GCCCSSCCHHHHHHHHHTHHHHTT
T ss_pred cccccccCchhHHHHHHHHHHHhc
Confidence 467889888888777763
No 154
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=24.40 E-value=31 Score=30.00 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHHHHHh---CCceeecCCCCchHHHHHhhhh
Q 025622 154 MHQELIEILSYALVIT---KNHIYTSGASGTNAAVIRGALR 191 (250)
Q Consensus 154 ~hq~LIEllsyAlvl~---gn~i~TSGA~GtNaAvIRGalr 191 (250)
+-+++++.++.-+-.. ++-++|+|||..|..+++++..
T Consensus 133 le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~ 173 (504)
T 2okj_A 133 MEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARY 173 (504)
T ss_dssp HHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHH
Confidence 4556667777666543 4678999999999999988753
No 155
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=24.18 E-value=3.3e+02 Score=23.11 Aligned_cols=116 Identities=18% Similarity=0.160 Sum_probs=69.3
Q ss_pred hcccceeeecccccCCChh--HHHHHHHH-HhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhCCc---eeecCCCC
Q 025622 109 VEGSGAVMVSEFKPVPDVD--YLQELLAI-QQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNH---IYTSGASG 180 (250)
Q Consensus 109 v~g~~~v~~~~~~~~p~vD--~lqELaaI-Qq~g~rrIa~lGsR--hv~~~hq~LIEllsyAlvl~gn~---i~TSGA~G 180 (250)
.+|.-...+.+|..--++| -+++|..- -+.|-.-|.++||- -.-..+.+-.+++..+.-..+.+ |+-.|+..
T Consensus 12 ~~Gv~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~ 91 (303)
T 2wkj_A 12 LRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVS 91 (303)
T ss_dssp GCSEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSS
T ss_pred CCceEEeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 4566666677776433355 45555553 46899999999984 44566667677776666555443 34556666
Q ss_pred chHHH--HHhhhhhcCCCceeEeecccccCCChhHHHHHHHHhhhhc
Q 025622 181 TNAAV--IRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKTVIE 225 (250)
Q Consensus 181 tNaAv--IRGalrae~P~lLTViLPQSL~kQp~Es~elLe~V~~lvE 225 (250)
|..++ .|-|-++ ..+-+-|+-|--.+--..+..+-.+.|..-+.
T Consensus 92 t~~ai~la~~A~~~-Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 92 TAESQQLAASAKRY-GFDAVSAVTPFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp HHHHHHHHHHHHHH-TCSEEEEECCCSSCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhC-CCCEEEecCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 65554 4445555 67777777665544323333444455555444
No 156
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=24.09 E-value=71 Score=28.01 Aligned_cols=40 Identities=10% Similarity=0.042 Sum_probs=26.5
Q ss_pred cchhHHHHHHHHHHHH---HHhCCceeecCCCCchHHHHHhhh
Q 025622 151 MGFMHQELIEILSYAL---VITKNHIYTSGASGTNAAVIRGAL 190 (250)
Q Consensus 151 v~~~hq~LIEllsyAl---vl~gn~i~TSGA~GtNaAvIRGal 190 (250)
.+-+++.+.+.+..-. +-..+-++|+|+++.+.++++..+
T Consensus 136 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 178 (500)
T 3tcm_A 136 IHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLI 178 (500)
T ss_dssp CHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHc
Confidence 4455666666554221 234677889999988888888775
No 157
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=24.07 E-value=1.5e+02 Score=24.77 Aligned_cols=64 Identities=9% Similarity=0.069 Sum_probs=41.3
Q ss_pred hHHHHHHHHHhcCCceEEEecccccchhH---HHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhh
Q 025622 127 DYLQELLAIQQQGPRAIGFFGTRNMGFMH---QELIEILSYALVITKNHIYTSGASGTNAAVIRGALRA 192 (250)
Q Consensus 127 D~lqELaaIQq~g~rrIa~lGsRhv~~~h---q~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalra 192 (250)
++++++..+.+.|.+.|.|.|..| |... ..+.|++.+.-...|=+|.+|.+. .+-.+++-.-++
T Consensus 95 ei~~~~~~~~~~G~~~i~l~gGe~-p~~~~~~~~~~~l~~~ik~~~~i~i~~s~g~-~~~e~l~~L~~a 161 (350)
T 3t7v_A 95 EIKETCKTLKGAGFHMVDLTMGED-PYYYEDPNRFVELVQIVKEELGLPIMISPGL-MDNATLLKAREK 161 (350)
T ss_dssp HHHHHHHHHTTSCCSEEEEEECCC-HHHHHSTHHHHHHHHHHHHHHCSCEEEECSS-CCHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCEEEEeeCCC-CccccCHHHHHHHHHHHHhhcCceEEEeCCC-CCHHHHHHHHHc
Confidence 488888888999999999987764 5444 667777766544445456555322 455555544444
No 158
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=23.97 E-value=33 Score=32.89 Aligned_cols=19 Identities=37% Similarity=0.576 Sum_probs=14.0
Q ss_pred eeecCC--CCchHHHHHhhhhh
Q 025622 173 IYTSGA--SGTNAAVIRGALRA 192 (250)
Q Consensus 173 i~TSGA--~GtNaAvIRGalra 192 (250)
|+|||+ .|.||| |||+.++
T Consensus 77 IltsGGdaPGmNa~-Ir~vv~~ 97 (555)
T 2f48_A 77 IILSGGPAPGGHNV-ISGVFDA 97 (555)
T ss_dssp EEEBSSCCTTHHHH-HHHHHHH
T ss_pred EECcCCCcHhHHHH-HHHHHHH
Confidence 579998 699875 4777655
No 159
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=23.74 E-value=40 Score=27.64 Aligned_cols=36 Identities=33% Similarity=0.546 Sum_probs=21.0
Q ss_pred cCCChhHHHHH-HHHHhcCCceEEEecccc---cchhHHH
Q 025622 122 PVPDVDYLQEL-LAIQQQGPRAIGFFGTRN---MGFMHQE 157 (250)
Q Consensus 122 ~~p~vD~lqEL-aaIQq~g~rrIa~lGsRh---v~~~hq~ 157 (250)
++|=+....+. .++...|.||||+|||+- -++....
T Consensus 99 ~iPvi~i~~~~~~~a~~~~~~rVgvLaT~~T~~s~~y~~~ 138 (231)
T 3ojc_A 99 GLPLLHIADATAVQIKQQGIDKIGLLGTRYTMEQGFYRGR 138 (231)
T ss_dssp CSCBCCHHHHHHHHHHHTTCCEEEEESCHHHHHSTTTHHH
T ss_pred CCCEeccHHHHHHHHHHcCCCEEEEEcCHHHhhchHHHHH
Confidence 45544433322 234457889999999874 4555443
No 160
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=23.70 E-value=73 Score=26.58 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=22.8
Q ss_pred HhcCCceEEEecccccchhHHHHHHHHHHHHHHhCCceeec
Q 025622 136 QQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 136 Qq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TS 176 (250)
.....++|||+|.-+|+- -|+..|+..|+.++--
T Consensus 27 ~~~~~~~I~iIG~G~mG~-------~~a~~l~~~G~~V~~~ 60 (320)
T 4dll_A 27 SDPYARKITFLGTGSMGL-------PMARRLCEAGYALQVW 60 (320)
T ss_dssp --CCCSEEEEECCTTTHH-------HHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEECccHHHH-------HHHHHHHhCCCeEEEE
Confidence 334456999999999984 3455666678876543
No 161
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=23.63 E-value=28 Score=28.68 Aligned_cols=23 Identities=17% Similarity=0.205 Sum_probs=13.4
Q ss_pred hhcCCCC---CCCC---hHHHhhhhhhhh
Q 025622 223 VIEKPHN---DHLP---LIEASRYTISFA 245 (250)
Q Consensus 223 lvE~pen---D~Lp---L~eAS~lCns~~ 245 (250)
+++.|.| .-+| +.+-..+|....
T Consensus 179 ~i~~p~nptG~~~~~~~l~~i~~~a~~~~ 207 (406)
T 1xi9_A 179 AVINPNNPTGALYDKKTLEEILNIAGEYE 207 (406)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHT
T ss_pred EEECCCCCCCCCcCHHHHHHHHHHHHHcC
Confidence 4566655 3345 666667776543
No 162
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=23.38 E-value=51 Score=26.70 Aligned_cols=25 Identities=4% Similarity=0.062 Sum_probs=16.2
Q ss_pred hhcCCCC---CCCChHHHhhhhhhhhhc
Q 025622 223 VIEKPHN---DHLPLIEASRYTISFAFF 247 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCns~~~~ 247 (250)
+++.|.| .-.|+.+-..+|.....+
T Consensus 170 ~~~~~~nptG~~~~l~~i~~l~~~~~~~ 197 (406)
T 3cai_A 170 AVNSASGTLGGVTDLRAMTKLVHDVGAL 197 (406)
T ss_dssp EEESBCTTTCBBCCCHHHHHHHHHTTCE
T ss_pred EEeCCcCCccccCCHHHHHHHHHHcCCE
Confidence 4566654 447788888888765443
No 163
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=23.28 E-value=2.6e+02 Score=22.90 Aligned_cols=43 Identities=14% Similarity=0.098 Sum_probs=28.8
Q ss_pred HHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHhCCceeecCCCC
Q 025622 133 LAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASG 180 (250)
Q Consensus 133 aaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~G 180 (250)
.+++..|.||||++++. + ..+-+.+...|...|=.++...+.|
T Consensus 110 ~al~~~g~~rvglltpy----~-~~~~~~~~~~l~~~Giev~~~~~~~ 152 (240)
T 3ixl_A 110 NGLRALGVRRVALATAY----I-DDVNERLAAFLAEESLVPTGCRSLG 152 (240)
T ss_dssp HHHHHTTCSEEEEEESS----C-HHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred HHHHHhCCCEEEEEeCC----h-HHHHHHHHHHHHHCCCEEeccccCC
Confidence 45677799999999982 2 3344555555566677777766655
No 164
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=23.27 E-value=1.9e+02 Score=20.55 Aligned_cols=31 Identities=16% Similarity=0.250 Sum_probs=15.4
Q ss_pred ceeecCCCCchHHH----HHhhhhhcCCCceeEee
Q 025622 172 HIYTSGASGTNAAV----IRGALRAERPDLLTVIL 202 (250)
Q Consensus 172 ~i~TSGA~GtNaAv----IRGalrae~P~lLTViL 202 (250)
.++..|-+|.+..- +.-.+...+|+++.|.+
T Consensus 40 ~v~n~g~~G~~~~~~~~~~~~~~~~~~pd~vvi~~ 74 (185)
T 3hp4_A 40 VLINASISGETSGGALRRLDALLEQYEPTHVLIEL 74 (185)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHCCSEEEEEC
T ss_pred EEEECCcCCccHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 45555555555432 22333334677666654
No 165
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=23.23 E-value=12 Score=32.52 Aligned_cols=22 Identities=14% Similarity=0.022 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHhCCceeecC
Q 025622 156 QELIEILSYALVITKNHIYTSG 177 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TSG 177 (250)
.+.++++-.+++..|..|+++-
T Consensus 82 t~a~~~~~~a~~~~gd~Vlv~~ 103 (446)
T 2x3l_A 82 TSGILSVIQSFSQKKGDILMAR 103 (446)
T ss_dssp HHHHHHHHHTTTTSSSCEEECT
T ss_pred HHHHHHHHHHhcCCCCEEEEec
Confidence 5677888888877787777764
No 166
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=23.16 E-value=3.4e+02 Score=22.83 Aligned_cols=116 Identities=24% Similarity=0.301 Sum_probs=63.2
Q ss_pred cccceeeecccccCCChh--HHHHHHH-HHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhCCc---eeecCCCCc
Q 025622 110 EGSGAVMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNH---IYTSGASGT 181 (250)
Q Consensus 110 ~g~~~v~~~~~~~~p~vD--~lqELaa-IQq~g~rrIa~lGsR--hv~~~hq~LIEllsyAlvl~gn~---i~TSGA~Gt 181 (250)
+|.-...+.++. -=++| -++++.. +-+.|-.-|.++||- -.-..+.+-.+++..+.-..+.+ |+-.|+..|
T Consensus 3 ~Gv~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t 81 (294)
T 2ehh_A 3 QGSIVALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNAT 81 (294)
T ss_dssp CEEEEECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCH
T ss_pred CceeeeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCH
Confidence 344444555664 22355 4555555 446899999999984 44456666666666666544443 344455555
Q ss_pred hHHH--HHhhhhhcCCCceeEeecccccCCChhHHHHHHHHhhhhcCC
Q 025622 182 NAAV--IRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKTVIEKP 227 (250)
Q Consensus 182 NaAv--IRGalrae~P~lLTViLPQSL~kQp~Es~elLe~V~~lvE~p 227 (250)
.-++ .|-|-++ ..+-+-|+-|--.+--..+..+-.+.|..-+..|
T Consensus 82 ~~ai~la~~A~~~-Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lP 128 (294)
T 2ehh_A 82 HEAVHLTAHAKEV-GADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIP 128 (294)
T ss_dssp HHHHHHHHHHHHT-TCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHHhc-CCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 5544 3444444 6777777766543322233333444454444333
No 167
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=23.12 E-value=50 Score=25.53 Aligned_cols=50 Identities=20% Similarity=0.420 Sum_probs=28.9
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHhC-CceeecCCCCch
Q 025622 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK-NHIYTSGASGTN 182 (250)
Q Consensus 128 ~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~g-n~i~TSGA~GtN 182 (250)
++.++ +++.|-..+.. ..+|=--..|.+.+..+++..+ .-|+|||++|..
T Consensus 44 ~L~~~--L~~~G~~v~~~---~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 44 IIKQL--LIENGHKIIGY---SLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHH--HHHTTCEEEEE---EEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred HHHHH--HHHCCCEEEEE---EEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 55544 34566543221 2223233566666766666544 679999999965
No 168
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=22.97 E-value=44 Score=27.99 Aligned_cols=52 Identities=10% Similarity=-0.049 Sum_probs=27.0
Q ss_pred cccCCChh-HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHH----hCCc---eeecCCC
Q 025622 120 FKPVPDVD-YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVI----TKNH---IYTSGAS 179 (250)
Q Consensus 120 ~~~~p~vD-~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl----~gn~---i~TSGA~ 179 (250)
|.+-+... +.+.|+..- |.+.|.|..+ -.+-+++.-.++.. .|.+ |+++...
T Consensus 72 y~~~~~~~~l~~~la~~~--~~~~v~~t~g------gt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~ 131 (467)
T 1ax4_A 72 YAGSRNYYDLKDKAKELF--NYDYIIPAHQ------GRGAENILFPVLLKYKQKEGKAKNPVFISNFH 131 (467)
T ss_dssp SSSCHHHHHHHHHHHHHH--CCCEEEEESS------HHHHHHHHHHHHHHHHHHTTCCSSCEEEESSC
T ss_pred cccCccHHHHHHHHHHHc--CCCcEEEcCC------cHHHHHHHHHHHHHhhccCCCccceEEEeccc
Confidence 44433333 555555543 3455544432 13456666666666 7777 7776433
No 169
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=22.93 E-value=27 Score=29.14 Aligned_cols=21 Identities=5% Similarity=0.134 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHhCCceeec
Q 025622 156 QELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (250)
++.++++..++...|.+|++.
T Consensus 119 ~~al~~~~~~l~~~gd~Vl~~ 139 (425)
T 1vp4_A 119 QQALDLIGKLFLDDESYCVLD 139 (425)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEe
Confidence 556666666665555555543
No 170
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=22.88 E-value=38 Score=27.02 Aligned_cols=20 Identities=20% Similarity=0.159 Sum_probs=14.1
Q ss_pred hhcCCCC---CCCChHHHhhhhh
Q 025622 223 VIEKPHN---DHLPLIEASRYTI 242 (250)
Q Consensus 223 lvE~pen---D~LpL~eAS~lCn 242 (250)
+++.|+| .-+|+.+-.++|.
T Consensus 159 ~~~~~~nptG~~~~~~~i~~l~~ 181 (390)
T 1elu_A 159 ILSHLLWNTGQVLPLAEIMAVCR 181 (390)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHH
T ss_pred EEeccccCCceecCHHHHHHHHh
Confidence 4566655 4578888888887
No 171
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=22.79 E-value=31 Score=28.46 Aligned_cols=21 Identities=19% Similarity=0.143 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHhCCceeec
Q 025622 156 QELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (250)
.+.++++..++...|..|+++
T Consensus 96 ~~al~~~~~~~~~~gd~Vl~~ 116 (411)
T 2o0r_A 96 TEAIAAAVLGLVEPGSEVLLI 116 (411)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEe
Confidence 455666666655455555443
No 172
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=22.74 E-value=33 Score=34.43 Aligned_cols=18 Identities=44% Similarity=0.427 Sum_probs=13.9
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 025622 173 IYTSGA--SGTNAAVIRGALR 191 (250)
Q Consensus 173 i~TSGA--~GtNaAvIRGalr 191 (250)
|+|||+ .|.||| |||+.|
T Consensus 398 IltsGGdapGmNaa-Iravv~ 417 (787)
T 3o8o_A 398 IVHVGAPSAALNAA-TRAATL 417 (787)
T ss_dssp EEEESSCCSSHHHH-HHHHHH
T ss_pred EEccCCCCHHHHHH-HHHHHH
Confidence 689998 899975 566655
No 173
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=22.62 E-value=3.5e+02 Score=22.86 Aligned_cols=115 Identities=19% Similarity=0.215 Sum_probs=63.7
Q ss_pred ccceeeecccccCCChh--HHHHHHH-HHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhCCc---eeecCCCCch
Q 025622 111 GSGAVMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNH---IYTSGASGTN 182 (250)
Q Consensus 111 g~~~v~~~~~~~~p~vD--~lqELaa-IQq~g~rrIa~lGsR--hv~~~hq~LIEllsyAlvl~gn~---i~TSGA~GtN 182 (250)
|.-...+.++ .--++| -++++.. +-+.|-.-|.++||- -.-..+.+-.+++..+.-..+.+ |+-.|+..|.
T Consensus 4 Gv~~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~ 82 (297)
T 2rfg_A 4 GSLIAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPV 82 (297)
T ss_dssp EEEEECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHH
T ss_pred eEEEeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHH
Confidence 4444445555 222255 4555555 446899999999984 44556666666666666544443 4455666665
Q ss_pred HHH--HHhhhhhcCCCceeEeecccccCCChhHHHHHHHHhhhhcCC
Q 025622 183 AAV--IRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKTVIEKP 227 (250)
Q Consensus 183 aAv--IRGalrae~P~lLTViLPQSL~kQp~Es~elLe~V~~lvE~p 227 (250)
-|+ .|-|-++ ..+-+-|+-|--.+--..+..+-.+.|..-+..|
T Consensus 83 ~ai~la~~A~~~-Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lP 128 (297)
T 2rfg_A 83 EAVRYAQHAQQA-GADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIP 128 (297)
T ss_dssp HHHHHHHHHHHH-TCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHhc-CCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 554 4445555 6787777766543322233333344454443333
No 174
>1sn9_A BBAT, tetrameric beta-BETA-alpha mini-protein; protein design, domain swapping, oligomerization, de novo protein; HET: DBZ; 1.20A {Synthetic} SCOP: k.14.1.1 PDB: 1sna_A* 1sne_A* 1xof_B* 1xof_A*
Probab=22.57 E-value=43 Score=20.90 Aligned_cols=17 Identities=29% Similarity=0.591 Sum_probs=13.5
Q ss_pred cCCChhHHHHHHHHHhc
Q 025622 122 PVPDVDYLQELLAIQQQ 138 (250)
Q Consensus 122 ~~p~vD~lqELaaIQq~ 138 (250)
.+|..|++.||+.+-.+
T Consensus 3 ripsydfadelakllrq 19 (26)
T 1sn9_A 3 RIPSYDFADELAKLLRQ 19 (26)
T ss_dssp CBTTBCHHHHHHHHHHH
T ss_pred CCCccchHHHHHHHHHH
Confidence 47889999999987443
No 175
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=22.53 E-value=62 Score=26.13 Aligned_cols=32 Identities=25% Similarity=0.100 Sum_probs=22.8
Q ss_pred cchhHHHHHHHHHHHHHH-hCCceeecCCCCch
Q 025622 151 MGFMHQELIEILSYALVI-TKNHIYTSGASGTN 182 (250)
Q Consensus 151 v~~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 182 (250)
+|=--..|.|.+..|+.. .-.-|+|||++|..
T Consensus 59 v~Dd~~~I~~al~~a~~~~~~DlVIttGGtg~g 91 (189)
T 1jlj_A 59 VPDEIEEIKETLIDWCDEKELNLILTTGGTGFA 91 (189)
T ss_dssp ECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred eCCCHHHHHHHHHHHhhcCCCCEEEEcCCCCCC
Confidence 333346777777777653 45789999999976
No 176
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=22.51 E-value=35 Score=27.83 Aligned_cols=44 Identities=16% Similarity=0.100 Sum_probs=28.7
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHhC-CceeecC
Q 025622 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK-NHIYTSG 177 (250)
Q Consensus 128 ~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~g-n~i~TSG 177 (250)
+-+.++..-.-.+..|.+..+ -++.++++..++...| .+|++..
T Consensus 63 lr~~la~~~~~~~~~v~~~~G------~~~ai~~~~~~~~~~g~d~Vl~~~ 107 (356)
T 1fg7_A 63 VIENYAQYAGVKPEQVLVSRG------ADEGIELLIRAFCEPGKDAILYCP 107 (356)
T ss_dssp HHHHHHHHHTSCGGGEEEESH------HHHHHHHHHHHHCCTTTCEEEECS
T ss_pred HHHHHHHHhCCChHHEEEcCC------HHHHHHHHHHHHhCCCCCEEEEeC
Confidence 666677665444455544322 4788888888887777 7777653
No 177
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=22.49 E-value=41 Score=27.59 Aligned_cols=21 Identities=10% Similarity=-0.069 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHhCCceeec
Q 025622 156 QELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (250)
++.++++..++...|.+|++.
T Consensus 114 ~~al~~~~~~l~~~gd~vl~~ 134 (416)
T 1bw0_A 114 SHGILMAITAICDAGDYALVP 134 (416)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEc
Confidence 566777777776566666554
No 178
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=22.47 E-value=95 Score=25.92 Aligned_cols=26 Identities=12% Similarity=0.038 Sum_probs=16.0
Q ss_pred hhcCCCCC--CC--C---hHHHhhhhhhhhhcc
Q 025622 223 VIEKPHND--HL--P---LIEASRYTISFAFFL 248 (250)
Q Consensus 223 lvE~penD--~L--p---L~eAS~lCns~~~~~ 248 (250)
++|.|.|- .. + |.+...+|...-.++
T Consensus 188 i~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~l 220 (467)
T 2oqx_A 188 VATITSNSAGGQPVSLANLKAMYSIAKKYDIPV 220 (467)
T ss_dssp EEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCE
T ss_pred EEeccccCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 46778764 22 3 567778887655443
No 179
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=22.45 E-value=36 Score=29.56 Aligned_cols=20 Identities=20% Similarity=0.159 Sum_probs=17.2
Q ss_pred Ccee-ecCCCCchHHHHHhhh
Q 025622 171 NHIY-TSGASGTNAAVIRGAL 190 (250)
Q Consensus 171 n~i~-TSGA~GtNaAvIRGal 190 (250)
+-++ |||+|..+.++|+|.+
T Consensus 70 ~v~f~t~~~T~a~n~~~~~~~ 90 (361)
T 3m5u_A 70 EVLFLQGGASLQFAMIPMNLA 90 (361)
T ss_dssp EEEEESSHHHHHHHHHHHHHC
T ss_pred eEEEEcCcHHHHHHHHHHhcC
Confidence 3466 9999999999999998
No 180
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=22.44 E-value=16 Score=29.53 Aligned_cols=119 Identities=9% Similarity=0.075 Sum_probs=56.4
Q ss_pred ccccCCChh-HHHHHHHHH-hcCCceEEEecccccchhHHHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhhcCCC
Q 025622 119 EFKPVPDVD-YLQELLAIQ-QQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPD 196 (250)
Q Consensus 119 ~~~~~p~vD-~lqELaaIQ-q~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~P~ 196 (250)
.|.+.+... +-++++..- ..++..|.+..+ -.+.++++..+++..|.+|++.--+= ......+ +...-+
T Consensus 58 ~y~~~~g~~~l~~~la~~~~~~~~~~v~~~~g------~~~a~~~~~~~l~~~gd~Vl~~~~~~--~~~~~~~-~~~g~~ 128 (375)
T 3op7_A 58 NYGWIEGSPAFKKSVSQLYTGVKPEQILQTNG------ATGANLLVLYSLIEPGDHVISLYPTY--QQLYDIP-KSLGAE 128 (375)
T ss_dssp SSCCTTCCHHHHHHHHTTSSSCCGGGEEEESH------HHHHHHHHHHHHCCTTCEEEEEESSC--THHHHHH-HHTTCE
T ss_pred CCCCCCChHHHHHHHHHHhccCChhhEEEcCC------hHHHHHHHHHHhcCCCCEEEEeCCCc--hhHHHHH-HHcCCE
Confidence 354444334 556666543 234455544432 35677777788877777776543211 1112222 221333
Q ss_pred ceeEeecccccCCChhHHHHHHHHhh------hhcCCCCC---CCC---hHHHhhhhhhhhhcc
Q 025622 197 LLTVILPQSLKKQPPESQELLAKVKT------VIEKPHND---HLP---LIEASRYTISFAFFL 248 (250)
Q Consensus 197 lLTViLPQSL~kQp~Es~elLe~V~~------lvE~penD---~Lp---L~eAS~lCns~~~~~ 248 (250)
...|=++. +..-.-.-+.|++.+. +++.|+|- -+| +.+-..+|.....++
T Consensus 129 ~~~v~~~~--~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~l 190 (375)
T 3op7_A 129 VDLWQIEE--ENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYI 190 (375)
T ss_dssp EEEEEEEG--GGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEE
T ss_pred EEEEeccc--cCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 33333321 0000001233433221 56766553 478 888888887654443
No 181
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=22.13 E-value=29 Score=31.64 Aligned_cols=10 Identities=30% Similarity=0.630 Sum_probs=8.7
Q ss_pred ceeecCCCCc
Q 025622 172 HIYTSGASGT 181 (250)
Q Consensus 172 ~i~TSGA~Gt 181 (250)
-|||||+||.
T Consensus 169 iiyTSGSTG~ 178 (620)
T 4dg8_A 169 INFSSGTTGR 178 (620)
T ss_dssp EEEEBSSSSS
T ss_pred EEECCCcccc
Confidence 4799999996
No 182
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=22.10 E-value=27 Score=31.26 Aligned_cols=10 Identities=30% Similarity=0.591 Sum_probs=8.5
Q ss_pred ceeecCCCCc
Q 025622 172 HIYTSGASGT 181 (250)
Q Consensus 172 ~i~TSGA~Gt 181 (250)
-+||||+||.
T Consensus 189 ii~TSGSTG~ 198 (617)
T 3rg2_A 189 FQLSGGTTGT 198 (617)
T ss_dssp EEECCCSSSS
T ss_pred EEECCCcCCC
Confidence 4789999995
No 183
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=21.97 E-value=30 Score=30.20 Aligned_cols=10 Identities=50% Similarity=0.966 Sum_probs=8.8
Q ss_pred ceeecCCCCc
Q 025622 172 HIYTSGASGT 181 (250)
Q Consensus 172 ~i~TSGA~Gt 181 (250)
-+||||.||.
T Consensus 160 i~~TSGTTG~ 169 (505)
T 3nyq_A 160 VVYTSGTTGP 169 (505)
T ss_dssp EEEECCSSSS
T ss_pred EEeCCCCcCC
Confidence 4899999995
No 184
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=21.95 E-value=64 Score=26.37 Aligned_cols=29 Identities=14% Similarity=0.163 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHHH-hCCceeecCCCCch
Q 025622 154 MHQELIEILSYALVI-TKNHIYTSGASGTN 182 (250)
Q Consensus 154 ~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 182 (250)
=...|.|.|..++.. .-.-|+|||++|..
T Consensus 50 d~~~I~~al~~a~~~~~~DlVitTGGtg~g 79 (195)
T 1di6_A 50 EQAIIEQTLCELVDEMSCHLVLTTGGTGPA 79 (195)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred CHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 346677777777653 45789999999975
No 185
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=21.84 E-value=58 Score=27.22 Aligned_cols=36 Identities=14% Similarity=-0.009 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHHHHHhCCceeecCCCCchHHHHHhh
Q 025622 154 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGA 189 (250)
Q Consensus 154 ~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGa 189 (250)
.+.+|-|.++.-+--..+-++|+|++-.|.++||.|
T Consensus 97 ~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~a 132 (434)
T 2epj_A 97 AEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLA 132 (434)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHH
Confidence 455666666544312345678888888888888875
No 186
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=21.81 E-value=54 Score=26.18 Aligned_cols=51 Identities=20% Similarity=0.350 Sum_probs=30.6
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHh-CCceeecCCCCchH
Q 025622 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVIT-KNHIYTSGASGTNA 183 (250)
Q Consensus 128 ~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~-gn~i~TSGA~GtNa 183 (250)
++.++ +++.|-..+. ...+|=--..|.+.+..|+... -.-|+|||++|...
T Consensus 44 ~L~~~--l~~~G~~v~~---~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 44 IIKQL--LIENGHKIIG---YSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp HHHHH--HHHTTCEEEE---EEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred HHHHH--HHHCCCEEEE---EEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 44443 4556654321 1223333567777887776542 47899999999764
No 187
>1gg4_A UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanyl ligase...; alpha/beta sheet; 2.30A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1
Probab=21.77 E-value=1.9e+02 Score=25.39 Aligned_cols=47 Identities=23% Similarity=0.286 Sum_probs=35.2
Q ss_pred HHHHHHHHHh--cCCceEEEecccccchhHHHHHHHHHHHHHHhCCceeecCC
Q 025622 128 YLQELLAIQQ--QGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGA 178 (250)
Q Consensus 128 ~lqELaaIQq--~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA 178 (250)
.+++|+.-+. ...+.|||-||.==.=+ -+|++..|...|..++|+|.
T Consensus 86 ~l~~la~~~~~~~~~~vI~VTGTnGKTTT----~~~l~~iL~~~g~~~~t~g~ 134 (452)
T 1gg4_A 86 AFGELAAWVRQQVPARVVALTGSSGKTSV----KEMTAAILSQCGNTLYTAGN 134 (452)
T ss_dssp HHHHHHHHHHHHSCCEEEEEECSSCHHHH----HHHHHHHHTTTSCEEECCTT
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCCCcHHH----HHHHHHHHHhcCCEeecccc
Confidence 8899988765 35789999999754433 56677777777888888876
No 188
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=21.74 E-value=73 Score=29.74 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=20.8
Q ss_pred hh-HHHHHHHHHhcCCceEEEecc
Q 025622 126 VD-YLQELLAIQQQGPRAIGFFGT 148 (250)
Q Consensus 126 vD-~lqELaaIQq~g~rrIa~lGs 148 (250)
+| ++.|+..+.+.|-+.|.+||-
T Consensus 72 id~l~~~~~~~~~lGi~av~LFgv 95 (356)
T 3obk_A 72 MEDLLKEVGEARSYGIKAFMLFPK 95 (356)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEecC
Confidence 67 889999999999999999985
No 189
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=21.72 E-value=36 Score=34.00 Aligned_cols=18 Identities=44% Similarity=0.783 Sum_probs=13.6
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 025622 173 IYTSGA--SGTNAAVIRGALR 191 (250)
Q Consensus 173 i~TSGA--~GtNaAvIRGalr 191 (250)
|+|||+ .|.|| ||||+.|
T Consensus 20 IltsGGdaPGmNa-aIravvr 39 (762)
T 3o8l_A 20 VLTSGGDAQGMNA-AVRAVVR 39 (762)
T ss_dssp EECCSSCCTTHHH-HHHHHHH
T ss_pred EEccCCCchhHhH-HHHHHHH
Confidence 579996 89997 4566666
No 190
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=21.72 E-value=42 Score=27.69 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHH-hCCceeecCCCCchHHHHHhhhh
Q 025622 156 QELIEILSYALVI-TKNHIYTSGASGTNAAVIRGALR 191 (250)
Q Consensus 156 q~LIEllsyAlvl-~gn~i~TSGA~GtNaAvIRGalr 191 (250)
.++.|.++.-+-. ..+-++|+|++..+.++++++++
T Consensus 64 ~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~ 100 (432)
T 3a9z_A 64 NTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVR 100 (432)
T ss_dssp HHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHh
Confidence 4666666655433 24778999999999999999874
No 191
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=21.46 E-value=2.9e+02 Score=22.42 Aligned_cols=60 Identities=20% Similarity=0.228 Sum_probs=33.8
Q ss_pred HHHHHHHHHhcCCc--eEEEeccc-------ccchhHHHHHHHHHHH--HHHhCCceeecCCCCchHHHHH
Q 025622 128 YLQELLAIQQQGPR--AIGFFGTR-------NMGFMHQELIEILSYA--LVITKNHIYTSGASGTNAAVIR 187 (250)
Q Consensus 128 ~lqELaaIQq~g~r--rIa~lGsR-------hv~~~hq~LIEllsyA--lvl~gn~i~TSGA~GtNaAvIR 187 (250)
|..||.++++.++. ++-+.=|| ..++++..|.|....- +...+.++|..|..+...+|.+
T Consensus 210 ~~~el~~l~~~~~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~vyvCGp~~m~~~v~~ 280 (311)
T 3lo8_A 210 YDEEFTSYLKQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPGIQD 280 (311)
T ss_dssp SHHHHHHHHHHCTTTEEEEEEETTTC-------CCHHHHHHHTHHHHHHHHHTTCEEEEEECGGGHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEEECCCCcccCCCcceehHHHHHHHHHHHHhhcCCcEEEEECCHHHHHHHHH
Confidence 67888888877652 23333333 2455655555432211 1236778888888877765533
No 192
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=21.45 E-value=29 Score=30.24 Aligned_cols=10 Identities=40% Similarity=0.471 Sum_probs=8.5
Q ss_pred ceeecCCCCc
Q 025622 172 HIYTSGASGT 181 (250)
Q Consensus 172 ~i~TSGA~Gt 181 (250)
-+||||.||.
T Consensus 172 i~~TSGTTG~ 181 (590)
T 3kxw_A 172 LQYTSGSTMH 181 (590)
T ss_dssp EEECSSCSSS
T ss_pred EEeCcCCCCC
Confidence 3799999994
No 193
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=21.41 E-value=91 Score=27.91 Aligned_cols=122 Identities=18% Similarity=0.244 Sum_probs=66.5
Q ss_pred ccccccccccCCccccCCCC------ccchhhhcccceeeecccccCCChh-HHHHH-HHHHhcCCceEEEecccccchh
Q 025622 83 EEENVIGMFGSDEDVGTQIP------TQAQSVVEGSGAVMVSEFKPVPDVD-YLQEL-LAIQQQGPRAIGFFGTRNMGFM 154 (250)
Q Consensus 83 ~~~~~~~~f~~d~~~~~~ip------tq~~~vv~g~~~v~~~~~~~~p~vD-~lqEL-aaIQq~g~rrIa~lGsRhv~~~ 154 (250)
.++....+||.++. .=| .+.+-.+.|+-.+.. +...++.- --+|+ +.+++.|-++|.-|||||-+
T Consensus 95 k~~~~~~v~gt~d~---~HPgv~~~~~~g~~~vgG~v~~l~--~~~f~~~~~tP~e~r~~f~~~gw~~VvafqTrNPi-- 167 (349)
T 1v47_A 95 LEALARAVFGTDSE---THPGVARLYGKGPYALAGRVEVLK--PRPRTPLEKTPEEVRAFFRQRGWRKVVAFQTRNAP-- 167 (349)
T ss_dssp HHHHHHHHHSCCCT---TSHHHHHHHHTCSEEEEBCEEESS--CCCCCTTCCCHHHHHHHHHHTTCCSEEEEEESSCC--
T ss_pred HHHHHHHHhCCCCc---CCcchHHHhhcCCEEEEEEEEEEE--cCCchhhcCCHHHHHHHHHhcCCCeEEEeecCCCC--
Confidence 33444567877664 222 234556777766654 33455433 34566 44567898888889999964
Q ss_pred HHHHHHHHHHHHHHhCCcee-ecCC-C---CchH----HHHHhhhhhcCCC--ceeEeecccccCCCh
Q 025622 155 HQELIEILSYALVITKNHIY-TSGA-S---GTNA----AVIRGALRAERPD--LLTVILPQSLKKQPP 211 (250)
Q Consensus 155 hq~LIEllsyAlvl~gn~i~-TSGA-~---GtNa----AvIRGalrae~P~--lLTViLPQSL~kQp~ 211 (250)
|.-=.+|+.+|+-....-++ =+++ + .+.+ ..++-++...=|. .+-.++|-.+.+--|
T Consensus 168 HrgH~~l~~~ale~~d~vll~P~~g~~K~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p~~m~~aGP 235 (349)
T 1v47_A 168 HRAHEYLIRLGLELADGVLVHPILGAKKPDDFPTEVIVEAYQALIRDFLPQERVAFFGLATPMRYAGP 235 (349)
T ss_dssp CHHHHHHHHHHHHHSSEEEEEEBCSCCCTTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCSCCCCCTH
T ss_pred chHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCHHHHHHHHHHHHhhcCCCcceEEEechHHhhcCCc
Confidence 43335666777766443333 2333 1 2222 3445555543144 223567777766443
No 194
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=21.38 E-value=2.3e+02 Score=25.01 Aligned_cols=25 Identities=28% Similarity=0.512 Sum_probs=16.0
Q ss_pred hhHHHHHHHHHhcCC---ceEEEecccc
Q 025622 126 VDYLQELLAIQQQGP---RAIGFFGTRN 150 (250)
Q Consensus 126 vD~lqELaaIQq~g~---rrIa~lGsRh 150 (250)
.-++||.+++.++|. +..-|+|.||
T Consensus 256 ~s~l~~r~~~~~~g~~~~~v~L~~G~R~ 283 (393)
T 4dql_A 256 RGFVQARKQLKEQGQSLGEAHLYFGCRS 283 (393)
T ss_dssp HHHHHHHHHHHHTTCCCCCEEEEEEESC
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEEECC
Confidence 347777766666653 3566777777
No 195
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=21.33 E-value=1.6e+02 Score=23.00 Aligned_cols=35 Identities=11% Similarity=0.057 Sum_probs=21.2
Q ss_pred HHhcCCceEEEecccccchhHHHHHHHHHHHHHHh
Q 025622 135 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVIT 169 (250)
Q Consensus 135 IQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~ 169 (250)
+-+.|.|+||+++...-...+++-.+=...||...
T Consensus 126 L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~ 160 (295)
T 3hcw_A 126 VIEQGVDELIFITEKGNFEVSKDRIQGFETVASQF 160 (295)
T ss_dssp HHHHCCSEEEEEEESSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCccEEEEcCCccchhHHHHHHHHHHHHHHc
Confidence 33479999999986544344555455444455433
No 196
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=21.30 E-value=1.8e+02 Score=22.53 Aligned_cols=36 Identities=11% Similarity=0.009 Sum_probs=23.4
Q ss_pred HHhcCCceEEEecccccchhHHHHHHHHHHHHHHhC
Q 025622 135 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK 170 (250)
Q Consensus 135 IQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~g 170 (250)
+-++|.|+||+++...-....++-.+-...+|...|
T Consensus 122 L~~~G~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g 157 (288)
T 3gv0_A 122 LAQCGRKRIAVIVPPSRFSFHDHARKGFNRGIRDFG 157 (288)
T ss_dssp HHHTTCCEEEEECCCTTSHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCCeEEEEcCCcccchHHHHHHHHHHHHHHcC
Confidence 345799999999776444445555565556665544
No 197
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=21.29 E-value=80 Score=29.29 Aligned_cols=23 Identities=26% Similarity=0.447 Sum_probs=21.8
Q ss_pred hh-HHHHHHHHHhcCCceEEEecc
Q 025622 126 VD-YLQELLAIQQQGPRAIGFFGT 148 (250)
Q Consensus 126 vD-~lqELaaIQq~g~rrIa~lGs 148 (250)
+| ++.|+..+.+.|-+.|.+||-
T Consensus 68 id~l~~~~~~~~~lGi~~v~LFgv 91 (342)
T 1h7n_A 68 VNRLKDYLKPLVAKGLRSVILFGV 91 (342)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEecc
Confidence 67 899999999999999999997
No 198
>4f06_A Extracellular ligand-binding receptor; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: MSE PHB; 1.30A {Rhodopseudomonas palustris} PDB: 4evs_A*
Probab=21.19 E-value=3.4e+02 Score=22.09 Aligned_cols=130 Identities=15% Similarity=0.132 Sum_probs=67.2
Q ss_pred ccccCCccccCCCCccchh-hhcccceeeecccccCCChhHHHHHHHHHhcCCceEEEecccccchhHHHHHHH-HHHHH
Q 025622 89 GMFGSDEDVGTQIPTQAQS-VVEGSGAVMVSEFKPVPDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEI-LSYAL 166 (250)
Q Consensus 89 ~~f~~d~~~~~~iptq~~~-vv~g~~~v~~~~~~~~p~vD~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEl-lsyAl 166 (250)
.++..|++.|...=..... +-+..+.|+..++-+..+-|+-..|..|++.++..|.++..-. --...++.- ....+
T Consensus 143 aii~~~~~~g~~~~~~~~~~~~~~g~~vv~~~~~~~~~~d~~~~l~~i~~~~pd~v~~~~~~~--~~~~~~~~~~~~~g~ 220 (371)
T 4f06_A 143 AIAVSDYGPGIDAETAFKKTFEAEGGKVVEAVRMPLSTTDFGPIMQRIKNSGADMIFTFLPAG--PPTLGFVKAYIDNGL 220 (371)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECTTCCCCHHHHHHHHHHTCSEEEEECCTT--HHHHHHHHHHHHTTT
T ss_pred EEEcCCcccchhHHHHHHHHHHhcCCceEEEEecCcccccHHHHHHHHHhcCCCEEEEEeccC--chhhHHHHHHHHhhh
Confidence 4555666655443222222 2233345556666665667899999999999999986543211 011111111 11222
Q ss_pred HHhCCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccCCChhHHHHHHHHhhh
Q 025622 167 VITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKTV 223 (250)
Q Consensus 167 vl~gn~i~TSGA~GtNaAvIRGalrae~P~lLTViLPQSL~kQp~Es~elLe~V~~l 223 (250)
-..+..++..|.. .+...+..+-.+ .+-+.+..|-......|+.++..+....-
T Consensus 221 ~~~~~~~~~~~~~-~~~~~~~~~~~~--~~g~~~~~~~~~~~~~p~~~~f~~~~~~~ 274 (371)
T 4f06_A 221 KAGGVKLMSTGDV-VTEPDLPNIGEA--GLGILSTYHYAVSHDSPENKAFLALLQKG 274 (371)
T ss_dssp TTTTCEEEEEGGG-GCGGGHHHHCGG--GTTCEEEESCCTTCCSHHHHHHHHHHHHT
T ss_pred hccCcEEEEeccc-CCHHHHHhcccc--cCceEEeeccccCCCChhHHHHHHHHHHh
Confidence 2334455554433 333333333222 22234445556666778888888776653
No 199
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=21.14 E-value=1.2e+02 Score=25.30 Aligned_cols=52 Identities=13% Similarity=0.056 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccC
Q 025622 157 ELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKK 208 (250)
Q Consensus 157 ~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~P~lLTViLPQSL~k 208 (250)
-+.-++.+|+.....+|+|.||+.-|.+.-=.+.-+..==-.+|++|.....
T Consensus 54 ~a~~~l~~a~~~g~~~vv~~GassGN~g~alA~~a~~~G~~~~iv~p~~~~~ 105 (338)
T 1tzj_A 54 KLEYLIPEALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNY 105 (338)
T ss_dssp HHHTTHHHHHHTTCCEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECCSSC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCchhHHHHHHHHHHHHhCCceEEEecCCCCc
Confidence 3444566666544467888665544432222222121223468899987754
No 200
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=21.10 E-value=47 Score=26.91 Aligned_cols=36 Identities=17% Similarity=0.166 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHhCCceeecCCCCchHHHHHhhhh
Q 025622 155 HQELIEILSYALVITKNHIYTSGASGTNAAVIRGALR 191 (250)
Q Consensus 155 hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalr 191 (250)
+..|.|.++.-+- ..+-++|+|++..|.++|+.++.
T Consensus 83 ~~~l~~~la~~~~-~~~v~~~~gg~~a~~~al~~~~~ 118 (406)
T 4adb_A 83 VLRLAKKLIDATF-ADRVFFCNSGAEANEAALKLARK 118 (406)
T ss_dssp HHHHHHHHHHHSS-CSEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCC-CCeEEEeCcHHHHHHHHHHHHHH
Confidence 4555555554331 23677888888888888886654
No 201
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=21.00 E-value=56 Score=27.16 Aligned_cols=22 Identities=5% Similarity=0.185 Sum_probs=15.8
Q ss_pred CCceeecCCCCchHHHHHhhhh
Q 025622 170 KNHIYTSGASGTNAAVIRGALR 191 (250)
Q Consensus 170 gn~i~TSGA~GtNaAvIRGalr 191 (250)
.+-++|+|++..+.++|+.+.+
T Consensus 120 ~~v~~~~g~~ea~~~a~~~~~~ 141 (421)
T 3l8a_A 120 EDILFIDGVVPAISIALQAFSE 141 (421)
T ss_dssp GGEEEESCHHHHHHHHHHHHSC
T ss_pred HHEEEcCCHHHHHHHHHHHhcC
Confidence 3567888888777777777643
No 202
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=20.98 E-value=37 Score=34.90 Aligned_cols=18 Identities=33% Similarity=0.466 Sum_probs=13.9
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 025622 173 IYTSGA--SGTNAAVIRGALR 191 (250)
Q Consensus 173 i~TSGA--~GtNaAvIRGalr 191 (250)
|+|||+ .|.||| |||+.|
T Consensus 576 IltsGGdapGmNaa-Iravv~ 595 (941)
T 3opy_B 576 IINVGAPAGGMNSA-VYSMAT 595 (941)
T ss_dssp EEEESSCCTTHHHH-HHHHHH
T ss_pred EEecCCCcHHHHHH-HHHHHH
Confidence 689995 899985 566655
No 203
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=20.93 E-value=34 Score=28.29 Aligned_cols=21 Identities=14% Similarity=0.025 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHhCCceeec
Q 025622 156 QELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 156 q~LIEllsyAlvl~gn~i~TS 176 (250)
.+.++++..++...|..|++.
T Consensus 112 t~a~~~~~~~~~~~gd~Vl~~ 132 (409)
T 2gb3_A 112 SEAILFSFAVIANPGDEILVL 132 (409)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEc
Confidence 566777777776566666655
No 204
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=20.81 E-value=34 Score=28.04 Aligned_cols=22 Identities=9% Similarity=-0.017 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHhCCceeec
Q 025622 155 HQELIEILSYALVITKNHIYTS 176 (250)
Q Consensus 155 hq~LIEllsyAlvl~gn~i~TS 176 (250)
-.+.++++..++...|.+|++.
T Consensus 110 ~t~al~~~~~~l~~~gd~Vl~~ 131 (389)
T 1o4s_A 110 AKQALFNAFMALLDPGDEVIVF 131 (389)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHHhCCCCCEEEEc
Confidence 3566677767665556655554
No 205
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=20.70 E-value=84 Score=29.02 Aligned_cols=23 Identities=26% Similarity=0.442 Sum_probs=21.1
Q ss_pred hh-HHHHHHHHHhcCCceEEEecc
Q 025622 126 VD-YLQELLAIQQQGPRAIGFFGT 148 (250)
Q Consensus 126 vD-~lqELaaIQq~g~rrIa~lGs 148 (250)
+| ++.|+..+.+.|-+.|.+||-
T Consensus 58 id~l~~~~~~~~~~Gi~~v~LFgv 81 (330)
T 1pv8_A 58 VKRLEEMLRPLVEEGLRCVLIFGV 81 (330)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCEEEEecC
Confidence 67 889999999999999999996
No 206
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=20.69 E-value=54 Score=25.91 Aligned_cols=52 Identities=10% Similarity=0.027 Sum_probs=28.7
Q ss_pred ccccCCChh-HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHhCCceeecCC
Q 025622 119 EFKPVPDVD-YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGA 178 (250)
Q Consensus 119 ~~~~~p~vD-~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA 178 (250)
.|.+-|... +-++|++.- |.+.+.++++- + +-+++...++...|.+|+++.-
T Consensus 33 ~y~~~~~~~~l~~~la~~~--g~~~~~~~~~g----t--~a~~~~~~~~~~~gd~Vl~~~~ 85 (347)
T 1jg8_A 33 VYGEDPTINELERLAAETF--GKEAALFVPSG----T--MGNQVSIMAHTQRGDEVILEAD 85 (347)
T ss_dssp GGTCCHHHHHHHHHHHHHH--TCSEEEEESCH----H--HHHHHHHHHHCCTTCEEEEETT
T ss_pred ccCCChHHHHHHHHHHHHh--CCceEEEecCc----H--HHHHHHHHHhcCCCCEEEEcCc
Confidence 354444443 555566554 44566666542 1 2234555666677888888654
No 207
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=20.66 E-value=3.7e+02 Score=22.44 Aligned_cols=91 Identities=15% Similarity=0.193 Sum_probs=53.0
Q ss_pred eeecccccCCChh--HHHHHHH-HHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhCCceeecCCCCchHHH--HH
Q 025622 115 VMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNHIYTSGASGTNAAV--IR 187 (250)
Q Consensus 115 v~~~~~~~~p~vD--~lqELaa-IQq~g~rrIa~lGsR--hv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAv--IR 187 (250)
..+.++. =-++| -++++.. +-+.|-.-|.++||- -.-..+.+-.+++..+.-..+.-|+-.|+..|.-++ +|
T Consensus 6 a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gvi~Gvg~~~t~~ai~la~ 84 (286)
T 2r91_A 6 PVITTFR-GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRVIVQVASLNADEAIALAK 84 (286)
T ss_dssp ECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSEEEECCCSSHHHHHHHHH
T ss_pred eEecCcC-CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCEEEeeCCCCHHHHHHHHH
Confidence 3344554 22355 4555555 446899999999984 445566666666666665544444455555555544 34
Q ss_pred hhhhhcCCCceeEeecccccC
Q 025622 188 GALRAERPDLLTVILPQSLKK 208 (250)
Q Consensus 188 Galrae~P~lLTViLPQSL~k 208 (250)
-|-++ ..+-+-|+-|- ..|
T Consensus 85 ~A~~~-Gadavlv~~P~-y~~ 103 (286)
T 2r91_A 85 YAESR-GAEAVASLPPY-YFP 103 (286)
T ss_dssp HHHHT-TCSEEEECCSC-SST
T ss_pred HHHhc-CCCEEEEcCCc-CCC
Confidence 44444 66777676664 444
No 208
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=20.66 E-value=53 Score=27.64 Aligned_cols=106 Identities=10% Similarity=0.071 Sum_probs=55.9
Q ss_pred hh-HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHhCCceeecC-CCCchHHHHHhhhhhcCCCceeEeec
Q 025622 126 VD-YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG-ASGTNAAVIRGALRAERPDLLTVILP 203 (250)
Q Consensus 126 vD-~lqELaaIQq~g~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSG-A~GtNaAvIRGalrae~P~lLTViLP 203 (250)
++ +.+.|+++- |.+.+-++++- .+-+++.-.+++..|.+|+++- .-+.+...++..++...-+. +.+|
T Consensus 68 ~~~l~~~la~~~--g~~~~~~~~sG------t~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~--~~v~ 137 (392)
T 3qhx_A 68 RTALEAALAAVE--DAAFGRAFSSG------MAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEY--TPVA 137 (392)
T ss_dssp HHHHHHHHHHHT--TCSEEEEESSH------HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEE--EEEC
T ss_pred HHHHHHHHHHHh--CCCcEEEECCH------HHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEE--EEeC
Confidence 44 555566553 44456666552 3556777777777787877754 33333334433333323222 2233
Q ss_pred ccccCCChhHHHHHHHHhh------hhcCCCCC---CCChHHHhhhhhhhhhcc
Q 025622 204 QSLKKQPPESQELLAKVKT------VIEKPHND---HLPLIEASRYTISFAFFL 248 (250)
Q Consensus 204 QSL~kQp~Es~elLe~V~~------lvE~penD---~LpL~eAS~lCns~~~~~ 248 (250)
-. .-+.|++.+. ++|.|.|- -.++.+-..+|.....++
T Consensus 138 ~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~l 184 (392)
T 3qhx_A 138 LA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKV 184 (392)
T ss_dssp TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEE
T ss_pred CC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEE
Confidence 21 2233333221 46777774 467888889997654433
No 209
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=20.64 E-value=2e+02 Score=22.50 Aligned_cols=28 Identities=11% Similarity=0.153 Sum_probs=20.6
Q ss_pred ceEEEecccccchhHHHHHHHHHHHHHHhCCceee
Q 025622 141 RAIGFFGTRNMGFMHQELIEILSYALVITKNHIYT 175 (250)
Q Consensus 141 rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~T 175 (250)
.+|+|+|.-+|+- .++++|+..|+.++-
T Consensus 24 mkI~IIG~G~mG~-------~la~~l~~~g~~V~~ 51 (220)
T 4huj_A 24 TTYAIIGAGAIGS-------ALAERFTAAQIPAII 51 (220)
T ss_dssp CCEEEEECHHHHH-------HHHHHHHHTTCCEEE
T ss_pred CEEEEECCCHHHH-------HHHHHHHhCCCEEEE
Confidence 6899999888774 345666677887765
No 210
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=20.63 E-value=30 Score=29.63 Aligned_cols=10 Identities=40% Similarity=0.850 Sum_probs=8.6
Q ss_pred ceeecCCCCc
Q 025622 172 HIYTSGASGT 181 (250)
Q Consensus 172 ~i~TSGA~Gt 181 (250)
-+||||.||.
T Consensus 168 i~~TSGTTG~ 177 (501)
T 3ipl_A 168 IMFTSGTTGP 177 (501)
T ss_dssp EEECCTTTSC
T ss_pred EEECCCCCCC
Confidence 3799999995
No 211
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=20.62 E-value=80 Score=26.49 Aligned_cols=29 Identities=21% Similarity=0.352 Sum_probs=23.3
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHHhCCceee
Q 025622 140 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYT 175 (250)
Q Consensus 140 ~rrIa~lGsRhv~~~hq~LIEllsyAlvl~gn~i~T 175 (250)
.+||||+|.-+||.- |+.-|+..||.++-
T Consensus 5 s~kIgfIGLG~MG~~-------mA~~L~~~G~~V~v 33 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTP-------IAEILLEAGYELVV 33 (297)
T ss_dssp CCEEEEECCSTTHHH-------HHHHHHHTTCEEEE
T ss_pred CCcEEEEecHHHHHH-------HHHHHHHCCCeEEE
Confidence 368999999999963 67777888998863
No 212
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=20.41 E-value=4e+02 Score=22.71 Aligned_cols=139 Identities=12% Similarity=0.117 Sum_probs=79.3
Q ss_pred CCc-cchhhhcccceeeeccccc-CCChh--HHHHHHHHH-hcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhCCc-
Q 025622 101 IPT-QAQSVVEGSGAVMVSEFKP-VPDVD--YLQELLAIQ-QQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNH- 172 (250)
Q Consensus 101 ipt-q~~~vv~g~~~v~~~~~~~-~p~vD--~lqELaaIQ-q~g~rrIa~lGsR--hv~~~hq~LIEllsyAlvl~gn~- 172 (250)
+|+ ....-.+|.-...+.++.. -=++| -+++|..-+ +.|-.-|.++||- -.-..+.+-.+++..+.-..+.+
T Consensus 3 ~~~~~~~~~~~Gv~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grv 82 (316)
T 3e96_A 3 LANKPLAKALETISGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRA 82 (316)
T ss_dssp ----CHHHHTSSEEECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSS
T ss_pred CCchhhhhcCCceEEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCC
Confidence 444 3345567887777888865 33455 556665544 7899999999985 44455677777777666555544
Q ss_pred --eeecCCCCchHHHHHhhhhhc--CCCceeEeecccccCCChhHHHHHHHHhhhhcCCC-----CCCCChHHHhhhh
Q 025622 173 --IYTSGASGTNAAVIRGALRAE--RPDLLTVILPQSLKKQPPESQELLAKVKTVIEKPH-----NDHLPLIEASRYT 241 (250)
Q Consensus 173 --i~TSGA~GtNaAvIRGalrae--~P~lLTViLPQSL~kQp~Es~elLe~V~~lvE~pe-----nD~LpL~eAS~lC 241 (250)
|+-.|+ .| ..+|+=+-+|+ ..+-+-|+-|-..+--..+..+-.+.|..-+..|- +-.|+.+.-.+|+
T Consensus 83 pViaGvg~-~t-~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La 158 (316)
T 3e96_A 83 LVVAGIGY-AT-STAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLA 158 (316)
T ss_dssp EEEEEECS-SH-HHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHT
T ss_pred cEEEEeCc-CH-HHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHH
Confidence 334453 44 44444333333 56777777776543333444455566665555441 2345555555554
No 213
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=20.41 E-value=34 Score=33.21 Aligned_cols=79 Identities=6% Similarity=-0.017 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhCCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccC------------CChhHHHHHHHH---h--
Q 025622 159 IEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKK------------QPPESQELLAKV---K-- 221 (250)
Q Consensus 159 IEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~P~lLTViLPQSL~k------------Qp~Es~elLe~V---~-- 221 (250)
+.++-.|++..|.+|++. .-+..+++.|+..+ . .-.|.++-..+. -+.+.++.|++. .
T Consensus 224 n~~ai~al~~pGD~VLv~--r~~H~S~~~~l~ls-G--a~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p 298 (715)
T 3n75_A 224 NKIVGMYSAPAGSTILID--RNCHKSLTHLMMMS-D--VTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWP 298 (715)
T ss_dssp HHHHHHHHCCTTCEEEEE--SSCCHHHHHHHHHS-C--CEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSC
T ss_pred HHHHHHHhCCCCCEEEEC--CCccHHHHHHHHHc-C--CEEEEEeccccccccccCcccccCCHHHHHHHHhhCcCccCc
Confidence 344445666667666665 33344555554333 2 223444432221 133344555432 1
Q ss_pred --hhhcCCC--CCCCChHHHhhhhh
Q 025622 222 --TVIEKPH--NDHLPLIEASRYTI 242 (250)
Q Consensus 222 --~lvE~pe--nD~LpL~eAS~lCn 242 (250)
=+|..|. .+-.++.+-..+|.
T Consensus 299 ~~vivt~pn~~G~v~dl~~I~ela~ 323 (715)
T 3n75_A 299 VHAVITNSTYDGLLYNTDFIKKTLD 323 (715)
T ss_dssp SEEEEESSCTTSEEECHHHHHHHCC
T ss_pred eEEEEECCCCCCccCCHHHHHHHhC
Confidence 2455552 23456777777775
No 214
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=20.40 E-value=84 Score=29.13 Aligned_cols=23 Identities=26% Similarity=0.300 Sum_probs=21.0
Q ss_pred hh-HHHHHHHHHhcCCceEEEecc
Q 025622 126 VD-YLQELLAIQQQGPRAIGFFGT 148 (250)
Q Consensus 126 vD-~lqELaaIQq~g~rrIa~lGs 148 (250)
+| ++.|+..+.+.|-+.|.+||-
T Consensus 65 id~l~~~~~~~~~lGi~~v~LFgv 88 (337)
T 1w5q_A 65 IDQLLIEAEEWVALGIPALALFPV 88 (337)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCEEEEecC
Confidence 57 889999999999999999997
No 215
>3gtz_A Putative translation initiation inhibitor; structural genomics, unknown function, PSI-2, protein struct initiative; 2.50A {Salmonella typhimurium}
Probab=20.36 E-value=31 Score=26.04 Aligned_cols=15 Identities=20% Similarity=0.372 Sum_probs=12.5
Q ss_pred HhCCceeecCCCCch
Q 025622 168 ITKNHIYTSGASGTN 182 (250)
Q Consensus 168 l~gn~i~TSGA~GtN 182 (250)
..|+.||+||-.|.+
T Consensus 19 ~~g~~lfvSGq~~~d 33 (124)
T 3gtz_A 19 IYNNTLWYTGVPENL 33 (124)
T ss_dssp EETTEEEEEECCSCT
T ss_pred EECCEEEEeccCCCC
Confidence 459999999988775
No 216
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=20.33 E-value=30 Score=28.47 Aligned_cols=37 Identities=16% Similarity=0.098 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHh--CCcee-ecCCCCchHHHHHhhhh
Q 025622 155 HQELIEILSYALVIT--KNHIY-TSGASGTNAAVIRGALR 191 (250)
Q Consensus 155 hq~LIEllsyAlvl~--gn~i~-TSGA~GtNaAvIRGalr 191 (250)
..++.|.++.-+-.. .+-++ |+|++..+.+++++.++
T Consensus 80 ~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~ 119 (398)
T 2fyf_A 80 VGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLID 119 (398)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcC
Confidence 455666666555443 24466 89999999999998853
No 217
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=20.30 E-value=34 Score=30.02 Aligned_cols=10 Identities=40% Similarity=0.790 Sum_probs=8.6
Q ss_pred ceeecCCCCc
Q 025622 172 HIYTSGASGT 181 (250)
Q Consensus 172 ~i~TSGA~Gt 181 (250)
-+||||.||.
T Consensus 181 i~~TSGTTG~ 190 (541)
T 1v25_A 181 MAYTTGTTGL 190 (541)
T ss_dssp EEEECSSSSS
T ss_pred EEECCCCCCC
Confidence 4799999995
No 218
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=20.27 E-value=2.5e+02 Score=24.52 Aligned_cols=59 Identities=22% Similarity=0.274 Sum_probs=29.4
Q ss_pred HHHHHHHHHhcCCc-eEEEeccc---ccchhHHHHHHHHH--HHHHHhCCceeecC-CCCchHHHH
Q 025622 128 YLQELLAIQQQGPR-AIGFFGTR---NMGFMHQELIEILS--YALVITKNHIYTSG-ASGTNAAVI 186 (250)
Q Consensus 128 ~lqELaaIQq~g~r-rIa~lGsR---hv~~~hq~LIElls--yAlvl~gn~i~TSG-A~GtNaAvI 186 (250)
|..||.++++.|+. ++-+.=|| +-.+++..|-|-.. +.+...|-++|..| +.+...+|.
T Consensus 273 y~~El~~~~~~~~~~~l~~a~Srd~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCG~p~~M~~~V~ 338 (374)
T 1ddg_A 273 YQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVE 338 (374)
T ss_dssp THHHHHHHHHTTSCCEEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEECTTTHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEEecCCCCCccHHHHHHHhHHHHHHHHhCCcEEEEECCCHHHHHHHH
Confidence 56677777766653 22222133 23445333333211 12223567788888 666655543
No 219
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=20.16 E-value=83 Score=29.02 Aligned_cols=76 Identities=24% Similarity=0.265 Sum_probs=49.5
Q ss_pred hh-HHHHHHHHHhcCCceEEEecc----------------------------------------------cccchhH---
Q 025622 126 VD-YLQELLAIQQQGPRAIGFFGT----------------------------------------------RNMGFMH--- 155 (250)
Q Consensus 126 vD-~lqELaaIQq~g~rrIa~lGs----------------------------------------------Rhv~~~h--- 155 (250)
+| ++.|+..+.+.|-+.|.+||- -|+|+++
T Consensus 57 id~l~~~~~~~~~lGi~~v~LFgvp~~Kd~~gs~A~~~~g~v~rair~iK~~~pdl~vitDvcLc~YT~HGHcGil~~g~ 136 (323)
T 1l6s_A 57 EKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHG 136 (323)
T ss_dssp GGGHHHHHHHHHHHTCCEEEEEEECSSCBSSCGGGGSTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBSSCCSSCBCSSS
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCCCCCccccccCCCCCcHHHHHHHHHHHCCCeEEEEeeeccccCCCCceEeccCCc
Confidence 57 888999999999999999986 2555553
Q ss_pred ---HHHHHHH---HHHHHHhCCcee-ecCCCCchHHHHHhhhhhcCCCceeEee
Q 025622 156 ---QELIEIL---SYALVITKNHIY-TSGASGTNAAVIRGALRAERPDLLTVIL 202 (250)
Q Consensus 156 ---q~LIEll---syAlvl~gn~i~-TSGA~GtNaAvIRGalrae~P~lLTViL 202 (250)
..-+|+| +-+.+..|-+|+ .|+-.----++||-||.++.=.- |-|+
T Consensus 137 V~ND~Tl~~Lak~Als~A~AGAdiVAPSdMMDGrV~aIR~aLd~~G~~~-v~Im 189 (323)
T 1l6s_A 137 VDNDATLENLGKQAVVAAAAGADFIAPSAAMDGQVQAIRQALDAAGFKD-TAIM 189 (323)
T ss_dssp BCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTTHHHHHHHHHHHTTCTT-CEEB
T ss_pred CccHHHHHHHHHHHHHHHHcCCCeEecccccccHHHHHHHHHHhCCCCC-ceee
Confidence 2334444 334455565544 47666666778888888765533 4444
No 220
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=20.14 E-value=42 Score=34.50 Aligned_cols=18 Identities=39% Similarity=0.700 Sum_probs=12.7
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 025622 173 IYTSGA--SGTNAAVIRGALR 191 (250)
Q Consensus 173 i~TSGA--~GtNaAvIRGalr 191 (250)
|+|||+ .|.||| |||+.|
T Consensus 186 IlTsGGdaPGmNAa-IRaVVr 205 (941)
T 3opy_B 186 VMTSGGDSPGMNPF-VRAVVR 205 (941)
T ss_dssp EEECSSCCTTHHHH-HHHHHH
T ss_pred EEeeCcCchhHHHH-HHHHHH
Confidence 579996 899985 444444
No 221
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=20.03 E-value=30 Score=30.19 Aligned_cols=10 Identities=50% Similarity=0.926 Sum_probs=5.8
Q ss_pred ceeecCCCCc
Q 025622 172 HIYTSGASGT 181 (250)
Q Consensus 172 ~i~TSGA~Gt 181 (250)
-+||||+||.
T Consensus 175 i~~TSGTTG~ 184 (517)
T 3r44_A 175 IMYTSGTTGH 184 (517)
T ss_dssp EEEECC---C
T ss_pred EEECCccccc
Confidence 4899999995
No 222
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=20.00 E-value=29 Score=30.12 Aligned_cols=10 Identities=50% Similarity=0.939 Sum_probs=6.7
Q ss_pred ceeecCCCCc
Q 025622 172 HIYTSGASGT 181 (250)
Q Consensus 172 ~i~TSGA~Gt 181 (250)
-+||||+||.
T Consensus 160 i~~TSGTTG~ 169 (503)
T 4fuq_A 160 ILYTSGTTGR 169 (503)
T ss_dssp EEECC--CCS
T ss_pred EEECCCcccC
Confidence 4899999995
Done!