Query 025625
Match_columns 250
No_of_seqs 163 out of 766
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 14:11:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025625.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025625hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v7d_A Suppressor of kinetocho 100.0 1.9E-47 6.6E-52 323.3 14.3 149 11-160 2-162 (169)
2 2p1m_A SKP1-like protein 1A; F 100.0 5.2E-45 1.8E-49 305.5 3.5 141 14-159 2-153 (160)
3 2ast_A S-phase kinase-associat 100.0 2.9E-43 9.8E-48 294.1 13.0 142 17-159 2-154 (159)
4 1fs1_B SKP1, cyclin A/CDK2-ass 100.0 4.4E-43 1.5E-47 288.2 11.4 130 16-151 2-141 (141)
5 1hv2_A Elongin C, ELC1; protei 99.9 1.1E-26 3.6E-31 180.3 5.2 96 13-116 1-99 (99)
6 2fnj_C Transcription elongatio 99.9 1.7E-26 5.9E-31 178.1 5.1 94 17-116 2-96 (96)
7 1vcb_B Protein (elongin C); tu 99.9 2.4E-26 8.4E-31 182.3 5.8 97 14-116 15-112 (112)
8 4ajy_C Transcription elongatio 99.9 9.1E-24 3.1E-28 162.6 5.9 94 17-116 3-97 (97)
9 2vkp_A BTB/POZ domain-containi 98.9 5.2E-09 1.8E-13 79.7 9.3 97 15-130 8-108 (109)
10 2yy9_A Zinc finger and BTB dom 98.9 1.4E-09 4.7E-14 87.0 5.0 99 16-137 26-125 (135)
11 2if5_A Zinc finger and BTB dom 98.8 3.5E-08 1.2E-12 76.5 10.2 94 15-127 25-119 (120)
12 1buo_A POZ domain, protein (pr 98.8 2.8E-08 9.5E-13 77.5 9.3 92 16-131 29-121 (121)
13 3htm_A Speckle-type POZ protei 98.8 4.9E-08 1.7E-12 79.6 10.3 102 16-136 35-137 (172)
14 1r29_A B-cell lymphoma 6 prote 98.7 8.5E-08 2.9E-12 75.1 10.1 93 16-128 30-124 (127)
15 2q81_A MIZ-1 protein; BTB/POZ 98.7 7.5E-08 2.6E-12 75.0 9.0 89 16-128 28-117 (119)
16 3b84_A Zinc finger and BTB dom 98.7 4E-08 1.4E-12 76.5 7.2 91 16-129 25-116 (119)
17 3hve_A Gigaxonin; ubiquitin, c 98.7 7.3E-08 2.5E-12 84.0 9.4 98 16-131 32-131 (256)
18 2vpk_A Myoneurin; transcriptio 98.7 1.4E-07 4.8E-12 72.7 9.9 92 16-128 23-115 (116)
19 3ga1_A Nucleus accumbens-assoc 98.6 3.9E-08 1.4E-12 77.5 6.0 92 16-129 34-126 (129)
20 2ppi_A Gigaxonin; BTB domain, 98.6 7.9E-08 2.7E-12 77.6 7.9 94 16-127 48-143 (144)
21 4eoz_A Speckle-type POZ protei 98.6 3E-08 1E-12 78.7 5.1 101 16-135 26-127 (145)
22 2z8h_A Transcription regulator 98.6 1.1E-07 3.9E-12 75.8 7.6 96 16-131 37-133 (138)
23 3i3n_A Kelch-like protein 11; 98.6 1.2E-07 3.9E-12 83.9 8.3 155 16-212 33-195 (279)
24 3ohu_A Transcription regulator 98.5 4E-08 1.4E-12 76.8 2.4 90 16-126 33-124 (125)
25 3m5b_A Zinc finger and BTB dom 98.5 1.5E-07 5.1E-12 73.9 4.9 86 16-129 31-117 (119)
26 3hqi_A Speckle-type POZ protei 98.4 9.4E-07 3.2E-11 79.0 9.5 102 16-136 175-277 (312)
27 2ihc_A Transcription regulator 98.4 1.7E-07 6E-12 73.4 3.3 92 16-127 30-122 (124)
28 3fkc_A Transcriptional regulat 98.3 1.5E-06 5.1E-11 67.5 6.6 83 16-121 32-115 (116)
29 3drz_A BTB/POZ domain-containi 87.4 1.3 4.4E-05 33.5 6.1 96 16-129 6-106 (107)
30 3drx_A BTB/POZ domain-containi 62.3 6.4 0.00022 33.5 3.8 102 11-130 7-113 (202)
31 1s1g_A Potassium voltage-gated 41.0 16 0.00056 28.3 2.7 92 16-126 13-107 (124)
32 3mkl_A HTH-type transcriptiona 31.2 1.5E+02 0.0052 21.5 7.2 80 63-147 3-85 (120)
33 1wgx_A KIAA1903 protein; MYB D 29.8 29 0.00099 24.7 2.2 40 101-144 15-54 (73)
34 2k9n_A MYB24; R2R3 domain, DNA 28.1 34 0.0012 25.3 2.5 36 124-159 24-66 (107)
35 2cqq_A RSGI RUH-037, DNAJ homo 28.1 36 0.0012 23.9 2.5 20 124-144 34-53 (72)
36 1su0_B NIFU like protein ISCU; 27.3 1.3E+02 0.0045 24.1 6.1 70 106-175 53-132 (159)
37 2dim_A Cell division cycle 5-l 26.7 36 0.0012 23.2 2.3 31 124-154 32-69 (70)
38 2nz0_B Potassium voltage-gated 25.9 20 0.00068 28.4 0.9 91 17-126 36-129 (140)
39 3htm_A Speckle-type POZ protei 25.9 46 0.0016 25.7 3.0 61 65-130 101-163 (172)
40 3g5o_A Uncharacterized protein 25.2 83 0.0028 23.5 4.3 49 99-147 47-97 (108)
41 3tnt_A SARS coronavirus main p 24.3 42 0.0015 30.0 2.7 95 58-156 191-298 (306)
42 4eef_G F-HB80.4, designed hema 24.0 18 0.0006 26.1 0.2 46 98-147 24-69 (74)
43 2guz_B Mitochondrial import in 23.7 96 0.0033 21.2 4.0 35 134-168 1-40 (65)
44 2jsp_A Transcriptional regulat 22.8 34 0.0012 25.3 1.5 18 133-150 43-60 (87)
45 1gv2_A C-MYB, MYB proto-oncoge 22.4 33 0.0011 25.1 1.4 36 124-159 27-69 (105)
46 1nn7_A Potassium channel KV4.2 21.9 22 0.00074 26.6 0.3 85 24-126 7-94 (105)
47 2f6h_X Myosin-2, type V myosin 21.7 74 0.0025 29.4 4.0 44 101-144 282-325 (419)
48 1x41_A Transcriptional adaptor 21.5 61 0.0021 21.4 2.5 21 124-144 31-51 (60)
No 1
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=100.00 E-value=1.9e-47 Score=323.32 Aligned_cols=149 Identities=26% Similarity=0.471 Sum_probs=129.4
Q ss_pred CCCCCccEEEEeCCCCEEEecHHHHhHcHHHHHHHhhcCCC---CCCCcccccCCCCCHHHHHHHHHHHHhccCCCC---
Q 025625 11 PEMMKSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMG---SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGS--- 84 (250)
Q Consensus 11 pe~~~~~I~L~SsDG~~f~V~~~aa~~S~~I~~ml~~~~~~---~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~--- 84 (250)
|.|++++|+|+|+||++|.|++++|++|.+|++|+.+.+.. +....+|||| +|++.+|++||+||+||+.++.
T Consensus 2 ~~m~~~~i~L~SsDG~~F~V~~~vA~~S~tIk~ml~~~~~~~~~~~~~~~Iplp-nV~s~iL~kVieyc~~h~~~~~~~~ 80 (169)
T 3v7d_A 2 AHMVTSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMGDDDDEDDDEIVMPVP-NVRSSVLQKVIEWAEHHRDSNFPDE 80 (169)
T ss_dssp ----CCEEEEECTTCCEEEEEHHHHTTSHHHHHHHHC-----------CEEECT-TCCHHHHHHHHHHHHHTTTCCCCC-
T ss_pred CCCCCCeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcCcccccccCCCceeeC-CCCHHHHHHHHHHHHHcccCCCccc
Confidence 45677899999999999999999999999999999866541 1123789999 8999999999999999997642
Q ss_pred ------CchhcchhhhhhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhccc
Q 025625 85 ------SNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPL 158 (250)
Q Consensus 85 ------s~~~i~~wD~eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~IkGKT~eEIR~~FgI~~D~T~EEe~ei~ 158 (250)
....+++||++|++++.++||+||.|||||+|++|+++||++||+||+||||+|||++|||++|||||||++++
T Consensus 81 ~~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd~t~eEe~~ir 160 (169)
T 3v7d_A 81 DDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIR 160 (169)
T ss_dssp -------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCCCCHHHHHHHH
T ss_pred ccccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHH
Confidence 23568999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cc
Q 025625 159 KN 160 (250)
Q Consensus 159 ~~ 160 (250)
++
T Consensus 161 ~e 162 (169)
T 3v7d_A 161 RE 162 (169)
T ss_dssp TT
T ss_pred Hh
Confidence 84
No 2
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=100.00 E-value=5.2e-45 Score=305.46 Aligned_cols=141 Identities=35% Similarity=0.574 Sum_probs=81.9
Q ss_pred CCccEEEEeCCCCEEEecHHHHhHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCC----------
Q 025625 14 MKSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPG---------- 83 (250)
Q Consensus 14 ~~~~I~L~SsDG~~f~V~~~aa~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~---------- 83 (250)
.+++|+|+|+||++|.|++.+|++|++|++|+.+.+ ...+|||| +|++.+|++||+||+||+.++
T Consensus 2 ~~~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~----~~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~ 76 (160)
T 2p1m_A 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDC----VDNGVPLP-NVTSKILAKVIEYCKRHVEAAASKAEAVEGA 76 (160)
T ss_dssp ------CCC---------CHHHHTCTTTC----------------CCT-TSCHHHHHHHHHC------------------
T ss_pred CCCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHccC----CCCceeCC-cCcHHHHHHHHHHHHHcccCCCccccccccc
Confidence 356899999999999999999999999999987643 25689999 899999999999999999653
Q ss_pred -CCchhcchhhhhhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhcccc
Q 025625 84 -SSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLK 159 (250)
Q Consensus 84 -~s~~~i~~wD~eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~IkGKT~eEIR~~FgI~~D~T~EEe~ei~~ 159 (250)
.....+++||++|++++.++||+||.|||||+|++|+++||++||++|+||||+|||++|||++|||||||+++++
T Consensus 77 ~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~eEe~~ir~ 153 (160)
T 2p1m_A 77 ATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRR 153 (160)
T ss_dssp ------------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCHHHHHHHHH
T ss_pred ccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 1345788999999999999999999999999999999999999999999999999999999999999999999887
No 3
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=100.00 E-value=2.9e-43 Score=294.06 Aligned_cols=142 Identities=35% Similarity=0.573 Sum_probs=127.6
Q ss_pred cEEEEeCCCCEEEecHHHHhHcHHHHHHHhhcCCC-CCCCcccccCCCCCHHHHHHHHHHHHhccCCCC----------C
Q 025625 17 YIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMG-SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGS----------S 85 (250)
Q Consensus 17 ~I~L~SsDG~~f~V~~~aa~~S~~I~~ml~~~~~~-~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~----------s 85 (250)
.|+|+|+||+.|.|++.+|.+|++|++|+.+.|+. ++...+|||| +|++.+|++||+||+||+.++. .
T Consensus 2 ~v~L~ssDg~~f~v~~~vA~~S~~i~~m~~~~~~~~e~~~~~Ipl~-~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~ 80 (159)
T 2ast_A 2 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLP-NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 80 (159)
T ss_dssp EEEEECTTSCEEEEEHHHHHTCHHHHHHTTSSCSS------CEECT-TSCHHHHHHHHHHHHHTTTCCC-----------
T ss_pred eEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCcccccCCCcCCC-CccHHHHHHHHHHHHHcCcCCCCcccccccccc
Confidence 48999999999999999999999999998865654 3345789999 8999999999999999996542 2
Q ss_pred chhcchhhhhhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhcccc
Q 025625 86 NKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLK 159 (250)
Q Consensus 86 ~~~i~~wD~eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~IkGKT~eEIR~~FgI~~D~T~EEe~ei~~ 159 (250)
...+++||++|++++.++||+||.|||||+|++|+++||++||++|+||||+|||++|||++||||||++++++
T Consensus 81 ~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eEe~~ir~ 154 (159)
T 2ast_A 81 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRK 154 (159)
T ss_dssp CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTHHHHHHH
T ss_pred hhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999887
No 4
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=100.00 E-value=4.4e-43 Score=288.16 Aligned_cols=130 Identities=35% Similarity=0.580 Sum_probs=110.3
Q ss_pred ccEEEEeCCCCEEEecHHHHhHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCC----------C
Q 025625 16 SYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGS----------S 85 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~aa~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~----------s 85 (250)
+.|+|+|+||++|.|++.+|++|.+|++|+.+.| +.+|||| +|++.+|++||+||+||+.++. .
T Consensus 2 ~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~-----~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 75 (141)
T 1fs1_B 2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLG-----MDPVPLP-NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 75 (141)
T ss_dssp CEEEEECTTSCEEEEEGGGGGTCHHHHHHHHHTC-----CSSEECT-TCCHHHHHHHHHHHHHHTTCC------------
T ss_pred CeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcC-----CCceecC-CcCHHHHHHHHHHHHHhccCCCccccccccccc
Confidence 4699999999999999999999999999998654 4589999 8999999999999999997542 2
Q ss_pred chhcchhhhhhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCCh
Q 025625 86 NKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTE 151 (250)
Q Consensus 86 ~~~i~~wD~eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~IkGKT~eEIR~~FgI~~D~T~ 151 (250)
...+++||++|++++.++||+||.|||||+|++|+++||++||++|+||||+|||++|||++||||
T Consensus 76 ~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~~f~I~~d~tp 141 (141)
T 1fs1_B 76 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTE 141 (141)
T ss_dssp -----HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHHHTC-------
T ss_pred hhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCC
Confidence 457899999999999999999999999999999999999999999999999999999999999997
No 5
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=99.93 E-value=1.1e-26 Score=180.34 Aligned_cols=96 Identities=20% Similarity=0.296 Sum_probs=83.5
Q ss_pred CCCccEEEEeCCCCEEEecHHHHhHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCC---CCchhc
Q 025625 13 MMKSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPG---SSNKER 89 (250)
Q Consensus 13 ~~~~~I~L~SsDG~~f~V~~~aa~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~---~s~~~i 89 (250)
|.+++|+|+|+||++|.|++++|++|.+|++|+.+ ++ ++...+|||| +|++.+|++||+||+||+.++ .....+
T Consensus 1 m~~~~v~L~SsDg~~f~V~~~vA~~S~~ik~ml~~-~~-e~~~~~Iplp-~V~~~iL~kVieyc~~h~~~~~~~~~~~~i 77 (99)
T 1hv2_A 1 MSQDFVTLVSKDDKEYEISRSAAMISPTLKAMIEG-PF-RESKGRIELK-QFDSHILEKAVEYLNYNLKYSGVSEDDDEI 77 (99)
T ss_dssp CCCSEEEEEETTTEEEEEEHHHHTTCHHHHHHHHS-ST-TTCTTEEEET-TSCHHHHHHHHHHHHHHHHHHHHCSSCSSC
T ss_pred CCCcEEEEEecCCCEEEECHHHHHHhHHHHHHHhc-cc-ccCCCceecC-CcCHHHHHHHHHHHHHhcccCCCccccccC
Confidence 45679999999999999999999999999999886 55 3345789999 899999999999999999643 223567
Q ss_pred chhhhhhhcCChHHHHhhhhhcccCCC
Q 025625 90 KSFDEKFIRMDTKRLCELTSAADSLQL 116 (250)
Q Consensus 90 ~~wD~eFl~id~~~L~eLi~AAnyL~I 116 (250)
++| ++++++||+||.|||||+|
T Consensus 78 ~~w-----~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 78 PEF-----EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCC-----CCCHHHHHHHHHHHHHHCC
T ss_pred CCc-----cCCHHHHHHHHHHHHHhCc
Confidence 888 7999999999999999997
No 6
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=99.92 E-value=1.7e-26 Score=178.13 Aligned_cols=94 Identities=21% Similarity=0.240 Sum_probs=80.2
Q ss_pred cEEEEeCCCCEEEecHHHHhHcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhhh
Q 025625 17 YIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 95 (250)
Q Consensus 17 ~I~L~SsDG~~f~V~~~aa~~S~~I~~ml~~~~~-~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~e 95 (250)
+|+|+|+||++|.|++++|++|.+|++|+.+.|. .+....+|||| +|++.+|++||+||+||+.++.+..++++|
T Consensus 2 ~v~L~SsDg~~f~V~~~~A~~S~~ik~ml~~~~~~~e~~~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~i~~w--- 77 (96)
T 2fnj_C 2 YVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF--- 77 (96)
T ss_dssp EEEEECTTSCEEEEEHHHHTTSHHHHHHHHCC--------CEEECS-SCCHHHHHHHHHHHHHHHHHHSCCSCCCCC---
T ss_pred eEEEEecCCCEEEeCHHHHHHhHHHHHHHHccCCcccccCCceeCC-CCCHHHHHHHHHHHHHccccCCCcccCCCc---
Confidence 7999999999999999999999999999987654 33345789999 899999999999999999654445678888
Q ss_pred hhcCChHHHHhhhhhcccCCC
Q 025625 96 FIRMDTKRLCELTSAADSLQL 116 (250)
Q Consensus 96 Fl~id~~~L~eLi~AAnyL~I 116 (250)
++++++||+||.|||||+|
T Consensus 78 --~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 78 --PIAPEIALELLMAANFLDC 96 (96)
T ss_dssp --CCCTTTHHHHHHHHHHHTC
T ss_pred --ccCHHHHHHHHHHHHHhCc
Confidence 7999999999999999997
No 7
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=99.92 E-value=2.4e-26 Score=182.26 Aligned_cols=97 Identities=21% Similarity=0.216 Sum_probs=81.6
Q ss_pred CCccEEEEeCCCCEEEecHHHHhHcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchh
Q 025625 14 MKSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSF 92 (250)
Q Consensus 14 ~~~~I~L~SsDG~~f~V~~~aa~~S~~I~~ml~~~~~-~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~w 92 (250)
++++|+|+|+||++|.|++++|++|.+|++|+.+.+. .+....+|||| +|++.+|++||+||+||+.++.+..++++|
T Consensus 15 ~~~~v~L~SsDG~~F~V~~~~A~~S~tIk~ml~~~~~~~e~~~~~Iplp-nV~s~iL~kVieyc~~h~~~~~~~~~i~~w 93 (112)
T 1vcb_B 15 DAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF 93 (112)
T ss_dssp --CEEEEECTTSCEEEEEHHHHHTSHHHHHHSSCC--------CEEECS-SCCHHHHHHHHHHHHHHHHHSSCSSCCCCC
T ss_pred CCCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHhcCCcccccCCceeCC-CCCHHHHHHHHHHHHHhhhccCCcCCCCCc
Confidence 4579999999999999999999999999999876553 23234689999 899999999999999999765556678888
Q ss_pred hhhhhcCChHHHHhhhhhcccCCC
Q 025625 93 DEKFIRMDTKRLCELTSAADSLQL 116 (250)
Q Consensus 93 D~eFl~id~~~L~eLi~AAnyL~I 116 (250)
++++++||+||.|||||+|
T Consensus 94 -----~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 94 -----PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp -----CCCHHHHHHHHHHHHHHTC
T ss_pred -----ccCHHHHHHHHHHHHHhCc
Confidence 7999999999999999997
No 8
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.89 E-value=9.1e-24 Score=162.61 Aligned_cols=94 Identities=21% Similarity=0.249 Sum_probs=79.8
Q ss_pred cEEEEeCCCCEEEecHHHHhHcHHHHHHHhhcC-CCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhhh
Q 025625 17 YIWLQTADGSIQQVEQEVAMFCPLICQEVIQKG-MGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 95 (250)
Q Consensus 17 ~I~L~SsDG~~f~V~~~aa~~S~~I~~ml~~~~-~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~e 95 (250)
+|+|+|+||++|.|++.+|.+|++|++|+.+.| ..++...+|||| +|++.+|++||+||+||+.++.+..++++|
T Consensus 3 ~v~L~SsDg~~F~v~r~vA~~S~~ik~m~~~~~~~~E~~~~~I~l~-~V~~~iL~kViey~~~h~~~~~~~~~i~~~--- 78 (97)
T 4ajy_C 3 YVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF--- 78 (97)
T ss_dssp EEEEECTTCCEEEEEHHHHTTSHHHHHHHCCC--------CEEECT-TSCHHHHHHHHHHHHHHHHHTTCCSCCCCC---
T ss_pred EEEEEecCCcEEEecHHHHHHhHHHHHHHHhCCCccccCCCceECC-CCCHHHHHHHHHHHHHhcccCCCcCCCCcC---
Confidence 799999999999999999999999999987653 223346789999 899999999999999999766555678999
Q ss_pred hhcCChHHHHhhhhhcccCCC
Q 025625 96 FIRMDTKRLCELTSAADSLQL 116 (250)
Q Consensus 96 Fl~id~~~L~eLi~AAnyL~I 116 (250)
+++.+.||+|+.|||||+.
T Consensus 79 --~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 79 --PIAPEIALELLMAANFLDC 97 (97)
T ss_dssp --CCCGGGHHHHHHHHHHHTC
T ss_pred --cCCHHHHHHHHHHHhhhCC
Confidence 5899999999999999983
No 9
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.92 E-value=5.2e-09 Score=79.65 Aligned_cols=97 Identities=13% Similarity=0.175 Sum_probs=79.1
Q ss_pred CccEEEEeCCC---CEEEecHHHH-hHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcc
Q 025625 15 KSYIWLQTADG---SIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERK 90 (250)
Q Consensus 15 ~~~I~L~SsDG---~~f~V~~~aa-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~ 90 (250)
...++|...+| +.|.+++.++ ..|++++.|+... ..++. ..|.|| ++++.+++.+++|++....
T Consensus 8 ~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~-~~e~~-~~i~l~-~~~~~~f~~~l~~iYt~~~--------- 75 (109)
T 2vkp_A 8 MADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGD-LAEVK-SEIHIP-DVEPAAFLILLKYMYSDEI--------- 75 (109)
T ss_dssp TCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC-------C-CEEEET-TSCHHHHHHHHHHHHHCCC---------
T ss_pred cccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCC-cccCC-CeEEeC-CCCHHHHHHHHHHHcCCCc---------
Confidence 46789988886 9999999995 5899999998633 32223 789999 8999999999999998652
Q ss_pred hhhhhhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHHH
Q 025625 91 SFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARI 130 (250)
Q Consensus 91 ~wD~eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~ 130 (250)
.++.+.+.+|+.||++|+++.|.+.|+..+...
T Consensus 76 -------~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 76 -------DLEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp -------CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -------cCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 356678899999999999999999999998764
No 10
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.88 E-value=1.4e-09 Score=86.99 Aligned_cols=99 Identities=15% Similarity=0.157 Sum_probs=75.4
Q ss_pred ccEEEEeCCCCEEEecHHH-HhHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhh
Q 025625 16 SYIWLQTADGSIQQVEQEV-AMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~a-a~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~ 94 (250)
..|+|.. +|+.|.+++.+ +..|++++.|+.... ...|.|| +|+..+|+.+++|++...
T Consensus 26 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~-----~~~i~l~-~~~~~~f~~lL~fiYtg~-------------- 84 (135)
T 2yy9_A 26 CDATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT-----GGSVVLP-AGFAEIFGLLLDFFYTGH-------------- 84 (135)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHTCC---------CCEEEC-GGGHHHHHHHHHHHHHSC--------------
T ss_pred cceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC-----CCeEEeC-CCCHHHHHHHHHHHhCCC--------------
Confidence 5678875 68999999998 568999999875321 4569999 799999999999999875
Q ss_pred hhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHHHHhCCCHH
Q 025625 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPE 137 (250)
Q Consensus 95 eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~IkGKT~e 137 (250)
+.++.+.+.+|+.||++|+|+.|.+.|++.+...+.|.++.
T Consensus 85 --~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~~~ 125 (135)
T 2yy9_A 85 --LALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQAQS 125 (135)
T ss_dssp --CCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC---------
T ss_pred --CCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCCCC
Confidence 24566779999999999999999999999999988887653
No 11
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.79 E-value=3.5e-08 Score=76.53 Aligned_cols=94 Identities=13% Similarity=0.177 Sum_probs=75.5
Q ss_pred CccEEEEeCCCCEEEecHHHH-hHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhh
Q 025625 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (250)
Q Consensus 15 ~~~I~L~SsDG~~f~V~~~aa-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD 93 (250)
...++|.. +|+.|.+++.++ ..|++++.|+.. +..+.....|.|+ +++..++..+++|++....
T Consensus 25 ~~Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~-~~~e~~~~~i~l~-~~~~~~f~~ll~~~Yt~~~------------ 89 (120)
T 2if5_A 25 LCDVVILV-EGREFPTHRSVLAACSQYFKKLFTS-GAVVDQQNVYEID-FVSAEALTALMDFAYTATL------------ 89 (120)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC------CCSEEECC-SSCHHHHHHHHHHHHHSCC------------
T ss_pred CCCeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcC-CccccCCceEEeC-CCCHHHHHHHHHHHcCCCC------------
Confidence 35788876 689999999995 579999998863 3323345679999 7999999999999997652
Q ss_pred hhhhcCChHHHHhhhhhcccCCCchHHHHHHHHH
Q 025625 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 127 (250)
Q Consensus 94 ~eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~V 127 (250)
.++.+.+.+|+.||++|+|++|.++|.+.+
T Consensus 90 ----~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 90 ----TVSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp ----CCCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ----ccCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 356678999999999999999999999865
No 12
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=98.78 E-value=2.8e-08 Score=77.54 Aligned_cols=92 Identities=17% Similarity=0.199 Sum_probs=77.9
Q ss_pred ccEEEEeCCCCEEEecHHH-HhHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhh
Q 025625 16 SYIWLQTADGSIQQVEQEV-AMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~a-a~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~ 94 (250)
..++|.. +|+.|.+++.+ +..|++++.|+.. ....|.|+ ++++.+++.+++|++....
T Consensus 29 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~------~~~~i~l~-~~~~~~f~~ll~~~Ytg~~------------- 87 (121)
T 1buo_A 29 CDVVIMV-DSQEFHAHRTVLACTSKMFEILFHR------NSQHYTLD-FLSPKTFQQILEYAYTATL------------- 87 (121)
T ss_dssp CCEEEEE-SSCEEEECHHHHHHHCHHHHHHTTS------CCSEEEEC-SSCHHHHHHHHHHHHHSCC-------------
T ss_pred CCEEEEE-CCEEEehhHHHHhhcCHHHHHHHcC------CCcEEEeC-CCCHHHHHHHHHhhcCCCc-------------
Confidence 5788876 68999999999 4789999998752 24579998 8999999999999998652
Q ss_pred hhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHHHH
Q 025625 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARII 131 (250)
Q Consensus 95 eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~I 131 (250)
.++.+.+.+|+.||++|+|+.|.+.|+..+...|
T Consensus 88 ---~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~I 121 (121)
T 1buo_A 88 ---QAKAEDLDDLLYAAEILEIEYLEEQCLKMLETIQ 121 (121)
T ss_dssp ---CCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred ---CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhC
Confidence 3456779999999999999999999999988754
No 13
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.75 E-value=4.9e-08 Score=79.62 Aligned_cols=102 Identities=18% Similarity=0.184 Sum_probs=81.8
Q ss_pred ccEEEEeCCCCEEEecHHHH-hHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhh
Q 025625 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~aa-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~ 94 (250)
..++|.. +|+.|.+++.++ ..|++++.|+... ..+.....|.|| +++..++..+++|++....
T Consensus 35 ~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~~l~~~Yt~~~------------- 98 (172)
T 3htm_A 35 TDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKA------------- 98 (172)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSC-CCGGGTTEEEEC-SSCHHHHHHHHHHHHHSCC-------------
T ss_pred cceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccC-ccccCCCeEEec-CCCHHHHHHHHHHHhCCCC-------------
Confidence 4688876 689999999995 6799999998733 322234679999 8999999999999998752
Q ss_pred hhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHHHHhCCCH
Q 025625 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 136 (250)
Q Consensus 95 eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~IkGKT~ 136 (250)
.++.+.+.+|+.||++|+|+.|.+.|...+...+...+.
T Consensus 99 ---~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~ 137 (172)
T 3htm_A 99 ---PNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENA 137 (172)
T ss_dssp ---TTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTH
T ss_pred ---CCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHH
Confidence 245577899999999999999999999998875544443
No 14
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.71 E-value=8.5e-08 Score=75.12 Aligned_cols=93 Identities=15% Similarity=0.265 Sum_probs=77.0
Q ss_pred ccEEEEeCCCCEEEecHHHH-hHcHHHHHHHhhcCCCCCCCccccc-CCCCCHHHHHHHHHHHHhccCCCCCchhcchhh
Q 025625 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISL-PQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~aa-~~S~~I~~ml~~~~~~~~~~~~IpL-p~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD 93 (250)
..|+|.. +|+.|.+++.++ ..|++++.|+... ..+ ....|.| + +++..+++.+++|++...
T Consensus 30 ~Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~-~~e-~~~~i~l~~-~~~~~~f~~ll~~~Ytg~------------- 92 (127)
T 1r29_A 30 TDVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQ-LKR-NLSVINLDP-EINPEGFNILLDFMYTSR------------- 92 (127)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTST-TTT-TCSEEECCT-TSCHHHHHHHHHHHHHSC-------------
T ss_pred CCEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCC-ccC-CCCEEEeCC-CCCHHHHHHHHHHHcCCC-------------
Confidence 5788876 589999999995 6899999998633 222 3567899 7 899999999999998765
Q ss_pred hhhhcCChHHHHhhhhhcccCCCchHHHHHHHHHH
Q 025625 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 128 (250)
Q Consensus 94 ~eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA 128 (250)
+.++.+.+.+|+.||++|+|+.|.+.|+..+.
T Consensus 93 ---~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 93 ---LNLREGNIMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp ---CCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ---cCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 23466789999999999999999999998875
No 15
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=98.68 E-value=7.5e-08 Score=74.96 Aligned_cols=89 Identities=12% Similarity=0.154 Sum_probs=75.1
Q ss_pred ccEEEEeCCCCEEEecHHHH-hHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhh
Q 025625 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~aa-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~ 94 (250)
..|+|.. +|+.|.+++.++ ..|++++.|+... ...|.++ .+++.+++.+++|++....
T Consensus 28 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~------~~~i~l~-~~~~~~f~~ll~~~Ytg~~------------- 86 (119)
T 2q81_A 28 CDCTFVV-DGVHFKAHKAVLAACSEYFKMLFVDQ------KDVVHLD-ISNAAGLGQVLEFMYTAKL------------- 86 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHC------CSGGGGG-GCCHHHHHHHHHHHHHSCC-------------
T ss_pred cceEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeC-CCCHHHHHHHHHHHcCCCC-------------
Confidence 5778875 689999999994 6799999998742 4568898 7999999999999998652
Q ss_pred hhhcCChHHHHhhhhhcccCCCchHHHHHHHHHH
Q 025625 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 128 (250)
Q Consensus 95 eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA 128 (250)
.++.+.+.+|+.||++|+|+.|.+.|+..++
T Consensus 87 ---~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 ---SLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp ---CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ---ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 3556679999999999999999999998874
No 16
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=98.67 E-value=4e-08 Score=76.51 Aligned_cols=91 Identities=15% Similarity=0.150 Sum_probs=74.7
Q ss_pred ccEEEEeCCCCEEEecHHH-HhHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhh
Q 025625 16 SYIWLQTADGSIQQVEQEV-AMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~a-a~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~ 94 (250)
..++|.. +|+.|.+++.+ +..|++++.|+.... ...|.|| ++++.+++.+++|++....
T Consensus 25 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~-~~~~~~f~~ll~~iYtg~~------------- 84 (119)
T 3b84_A 25 CDATLDV-GGLVFKAHWSVLACCSHFFQSLYGDGS-----GGSVVLP-AGFAEIFGLLLDFFYTGHL------------- 84 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTTT-----CCCEEEC-GGGHHHHHHHHHHHHHSCC-------------
T ss_pred cceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCCC-----CCeEEeC-CCCHHHHHHHHHHHcCCCC-------------
Confidence 5678875 68999999999 467999999876321 4679999 8999999999999998652
Q ss_pred hhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHH
Q 025625 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 129 (250)
Q Consensus 95 eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~ 129 (250)
.++.+.+.+|+.||++|+|+.|.+.|+..+..
T Consensus 85 ---~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 85 ---ALTSGNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp ---CCCTTTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred ---ccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 34566789999999999999999999987653
No 17
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=98.66 E-value=7.3e-08 Score=84.04 Aligned_cols=98 Identities=26% Similarity=0.308 Sum_probs=75.7
Q ss_pred ccEEEEeCCCCEEEecHHHH-hHcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhh
Q 025625 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~aa-~~S~~I~~ml~~~~~-~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD 93 (250)
..|+|.. +|+.|.+++.++ ..|++++.|+..... .+.....|.|| +|++.++..+++|++...
T Consensus 32 ~Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~-~v~~~~f~~ll~~~Yt~~------------- 96 (256)
T 3hve_A 32 CDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE-GISVMVMREILDYIFSGQ------------- 96 (256)
T ss_dssp CCEEEEE-TTEEEEECHHHHHTTCHHHHHTC-----------CEEECS-SCCHHHHHHHHHHHHHSC-------------
T ss_pred cceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeC-CCCHHHHHHHHhhccCCC-------------
Confidence 5788875 689999999995 579999998763321 12235679999 799999999999999865
Q ss_pred hhhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHHHH
Q 025625 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARII 131 (250)
Q Consensus 94 ~eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~I 131 (250)
+.++.+.+.+|+.||++|+|+.|.+.|+.++...+
T Consensus 97 ---~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l 131 (256)
T 3hve_A 97 ---IRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCI 131 (256)
T ss_dssp ---CCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTC
T ss_pred ---CcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhC
Confidence 23566779999999999999999999999998744
No 18
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=98.66 E-value=1.4e-07 Score=72.75 Aligned_cols=92 Identities=13% Similarity=0.136 Sum_probs=73.5
Q ss_pred ccEEEEeCCCCEEEecHHHH-hHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhh
Q 025625 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~aa-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~ 94 (250)
..|+|.. +|+.|.+++.++ ..|++++.|+...+ ...-.|++| ++++.+++.+++|++...
T Consensus 23 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~-~~~~~~f~~ll~~~Yt~~-------------- 83 (116)
T 2vpk_A 23 CDCTIVI-GEFQFKAHRNVLASFSEYFGAIYRSTS---ENNVFLDQS-QVKADGFQKLLEFIYTGT-------------- 83 (116)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCC---CSCEECCTT-TCCHHHHHHHHHHHHHSC--------------
T ss_pred CcEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCCC---CCeEEeecC-CCCHHHHHHHHHHHcCCC--------------
Confidence 5677766 589999999994 68999999986431 112235555 699999999999999865
Q ss_pred hhhcCChHHHHhhhhhcccCCCchHHHHHHHHHH
Q 025625 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 128 (250)
Q Consensus 95 eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA 128 (250)
+.++.+.+.+|+.||++|+|+.|.+.|+..+.
T Consensus 84 --~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 84 --LNLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp --CCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred --cccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 23456789999999999999999999998763
No 19
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.63 E-value=3.9e-08 Score=77.50 Aligned_cols=92 Identities=15% Similarity=0.239 Sum_probs=71.7
Q ss_pred ccEEEEeCCCCEEEecHHHH-hHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhh
Q 025625 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~aa-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~ 94 (250)
..++|.. +|+.|.+++.++ ..|++++.|+... ....|.||.++++.+++.+++|++...
T Consensus 34 ~Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~-----~~~~i~l~~~~~~~~f~~ll~~iYtg~-------------- 93 (129)
T 3ga1_A 34 CDVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS-----RSAVVELPAAVQPQSFQQILSFCYTGR-------------- 93 (129)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC-----CCSEEECCTTCCHHHHHHHHHHHHHSE--------------
T ss_pred cceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC-----CCCEEEECCCCCHHHHHHHHHHHhCCc--------------
Confidence 5678876 799999999995 5899999998754 256788964699999999999998765
Q ss_pred hhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHH
Q 025625 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 129 (250)
Q Consensus 95 eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~ 129 (250)
+.++.+.+.+|+.||++|+|+.|.+.|+.++..
T Consensus 94 --~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 94 --LSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp --EECCTTTHHHHHHHHHHTTBTTSSCC-------
T ss_pred --cccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 345667799999999999999999999988764
No 20
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=98.63 E-value=7.9e-08 Score=77.63 Aligned_cols=94 Identities=26% Similarity=0.310 Sum_probs=75.2
Q ss_pred ccEEEEeCCCCEEEecHHHH-hHcHHHHHHHhhcCCC-CCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhh
Q 025625 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMG-SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~aa-~~S~~I~~ml~~~~~~-~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD 93 (250)
..|+|.. +|+.|.+++.++ ..|++++.|+...... +.....|.|+ +|+..+++.+++|++.-.
T Consensus 48 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~-~v~~~~f~~lL~fiYtg~------------- 112 (144)
T 2ppi_A 48 CDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE-GISVMVMREILDYIFSGQ------------- 112 (144)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECC-SSCHHHHHHHHHHHTTSC-------------
T ss_pred cceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeC-CCCHHHHHHHHHHHhCCC-------------
Confidence 5678876 689999999995 5899999998743211 1235679999 799999999999998654
Q ss_pred hhhhcCChHHHHhhhhhcccCCCchHHHHHHHHH
Q 025625 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 127 (250)
Q Consensus 94 ~eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~V 127 (250)
+.++.+.+.+|+.||++|+|+.|.++|++++
T Consensus 113 ---~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 113 ---IRLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp ---CCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred ---CCCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 2356678999999999999999999998754
No 21
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=98.62 E-value=3e-08 Score=78.65 Aligned_cols=101 Identities=18% Similarity=0.184 Sum_probs=75.1
Q ss_pred ccEEEEeCCCCEEEecHHHH-hHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhh
Q 025625 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~aa-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~ 94 (250)
..++|.. +|+.|.+++.++ ..|++++.|+... ..+.....|.+| ++++.+++.+++|++....
T Consensus 26 ~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~~~~~l~~~Y~~~~------------- 89 (145)
T 4eoz_A 26 TDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKA------------- 89 (145)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSS-SHHHHHTEEEEC-SSCHHHHHHHHHHHHHSCC-------------
T ss_pred cceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCC-CcCCCCceEEec-CCCHHHHHHHHHhhccCcc-------------
Confidence 4688876 688999999995 6799999998632 211123579999 7999999999999998752
Q ss_pred hhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHHHHhCCC
Q 025625 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKT 135 (250)
Q Consensus 95 eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~IkGKT 135 (250)
.++.+.+.+|+.||++|+|+.|.+.|+..+...+...+
T Consensus 90 ---~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n 127 (145)
T 4eoz_A 90 ---PNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVEN 127 (145)
T ss_dssp ---TTGGGTHHHHHHHHHHTTCHHHHHHHHCC---------
T ss_pred ---CCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHH
Confidence 24456788999999999999999999999887554433
No 22
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=98.58 E-value=1.1e-07 Score=75.80 Aligned_cols=96 Identities=8% Similarity=0.176 Sum_probs=77.9
Q ss_pred ccEEEEeCCCCEEEecHHHH-hHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhh
Q 025625 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~aa-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~ 94 (250)
..|+|.. +|+.|.+++.++ ..|++++.|+... .. +...|.+|.+|+...++.+++|++...
T Consensus 37 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~-~~--e~~~i~l~~~v~~~~~~~lL~~~Ytg~-------------- 98 (138)
T 2z8h_A 37 CDVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQ-TD--AELTVTLPEEVTVKGFEPLIQFAYTAK-------------- 98 (138)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTC-CC--TTEEEECCTTSCHHHHHHHHHHHHHSC--------------
T ss_pred cCeEEEE-CCEEEechHHHHHHcCHHHHHHHhcC-CC--CCceEEeCCCCCHHHHHHHHHHhcCCC--------------
Confidence 4688876 589999999995 6899999998633 21 245688864799999999999999865
Q ss_pred hhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHHHH
Q 025625 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARII 131 (250)
Q Consensus 95 eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~I 131 (250)
+.++.+.+.+|+.||++|+|+.|.+.|++++...+
T Consensus 99 --~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 99 --LILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKF 133 (138)
T ss_dssp --CCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCC
T ss_pred --cccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 23566779999999999999999999999886543
No 23
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=98.58 E-value=1.2e-07 Score=83.91 Aligned_cols=155 Identities=14% Similarity=0.153 Sum_probs=99.7
Q ss_pred ccEEEEeC--CCCEEEecHHHH-hHcHHHHHHHhhcCCCCCCCcccccCC-----CCCHHHHHHHHHHHHhccCCCCCch
Q 025625 16 SYIWLQTA--DGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQ-----RVNPAMLSLILDYCRFHQVPGSSNK 87 (250)
Q Consensus 16 ~~I~L~Ss--DG~~f~V~~~aa-~~S~~I~~ml~~~~~~~~~~~~IpLp~-----~Vss~iL~kIIeyC~~Hk~~~~s~~ 87 (250)
..|+|... ||+.|.+++.++ ..|++++.|+.. +..+.....|.|+. +|++.++..+++|++...
T Consensus 33 ~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~-~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~------- 104 (279)
T 3i3n_A 33 CDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSG-QFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGR------- 104 (279)
T ss_dssp CCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCSCHHHHHHHHHHHHHSE-------
T ss_pred CCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcC-CCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCC-------
Confidence 56888876 799999999995 579999998752 23333345688852 599999999999999765
Q ss_pred hcchhhhhhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhcccccccCchHH
Q 025625 88 ERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLKNTTDDPRI 167 (250)
Q Consensus 88 ~i~~wD~eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~IkGKT~eEIR~~FgI~~D~T~EEe~ei~~~~~~~p~~ 167 (250)
+.++.+.+.+|+.||++|+|+.|.+.|+.++...+.-.+.-.|. ..+..
T Consensus 105 ---------~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~----------------------~~A~~ 153 (279)
T 3i3n_A 105 ---------IRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIH----------------------SLAHM 153 (279)
T ss_dssp ---------EEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHH----------------------HHHHH
T ss_pred ---------cccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHH----------------------HHHHH
Confidence 23456779999999999999999999999998755444433332 22233
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccchhhhccccChHHHHhhhcCC
Q 025625 168 RLLNRLYAKKRKELKEREKLKNVESEEERVDERSVDDLLQFINGG 212 (250)
Q Consensus 168 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 212 (250)
..+..|.....+++.+.-. .+ ...+.+-+-|.+.|...|.-+
T Consensus 154 ~~~~~L~~~~~~~i~~~f~--~v-~~~~~f~~L~~~~l~~lL~~d 195 (279)
T 3i3n_A 154 YTLSQLALKAADMIRRNFH--KV-IQDEEFYTLPFHLIRDWLSDL 195 (279)
T ss_dssp TTCHHHHHHHHHHHHHTHH--HH-TTSSGGGGSCHHHHHHHHTCS
T ss_pred cCcHHHHHHHHHHHHHHHH--HH-hcCcChhcCCHHHHHHHhcCc
Confidence 3344454545555533211 11 112344566777777777643
No 24
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=98.48 E-value=4e-08 Score=76.80 Aligned_cols=90 Identities=16% Similarity=0.222 Sum_probs=73.5
Q ss_pred ccEEEEeCCCCEEEecHHH-HhHcHHHHHHHhhcCCCCCCCcccccCCC-CCHHHHHHHHHHHHhccCCCCCchhcchhh
Q 025625 16 SYIWLQTADGSIQQVEQEV-AMFCPLICQEVIQKGMGSSKNYAISLPQR-VNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~a-a~~S~~I~~ml~~~~~~~~~~~~IpLp~~-Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD 93 (250)
..|+|.. +|+.|.+++.+ +..|++++.|+.... . +...|.+| + ++..+++.+++|++...
T Consensus 33 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-~--e~~~i~l~-~~~~~~~f~~~l~~iYtg~------------- 94 (125)
T 3ohu_A 33 CDVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQT-K--NDLVVSLP-EEVTARGFGPLLQFAYTAK------------- 94 (125)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCC-C--SSCEEECC-TTCCHHHHHHHHHHHTTSE-------------
T ss_pred cceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCC-C--CCcEEEeC-CCCCHHHHHHHHHhHcCCc-------------
Confidence 5688875 68999999999 467999999886332 1 25678998 6 99999999999998654
Q ss_pred hhhhcCChHHHHhhhhhcccCCCchHHHHHHHH
Q 025625 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRA 126 (250)
Q Consensus 94 ~eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~ 126 (250)
+.++.+.+.+|+.||++|+|+.|.+.|+++
T Consensus 95 ---~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~ 124 (125)
T 3ohu_A 95 ---LLLSRENIREVIRCAEFLRMHNLEDSCFSF 124 (125)
T ss_dssp ---EEECTTTHHHHHHHHHHHTBSSCTTSSCCC
T ss_pred ---eEECHHHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 245667899999999999999999988753
No 25
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=98.45 E-value=1.5e-07 Score=73.90 Aligned_cols=86 Identities=14% Similarity=0.136 Sum_probs=71.2
Q ss_pred ccEEEEeCCCCEEEecHHH-HhHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhh
Q 025625 16 SYIWLQTADGSIQQVEQEV-AMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~a-a~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~ 94 (250)
..|+|.. +|+.|.+++.+ |..|++++. ....|.|+ +|++.+|+.+++|++.-.
T Consensus 31 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~----------~~~~i~l~-~v~~~~f~~ll~fiYtg~-------------- 84 (119)
T 3m5b_A 31 CDTLITV-GSQEFPAHSLVLAGVSQQLGR----------RGQWALGE-GISPSTFAQLLNFVYGES-------------- 84 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHTTCGGGCC----------CEEEECCS-SCCHHHHHHHHHHHTTCC--------------
T ss_pred cceEEEE-CCEEEeeEHHHHHHcCHHHhc----------CCCEEEeC-CCCHHHHHHHHHHHcCCC--------------
Confidence 5688876 69999999999 457888863 24568898 899999999999998754
Q ss_pred hhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHH
Q 025625 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 129 (250)
Q Consensus 95 eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~ 129 (250)
+.++.+.+.+|+.||++|+|+.|.+.|++++.+
T Consensus 85 --~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 85 --VELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp --EEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred --cCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 346778899999999999999999999998765
No 26
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=98.40 E-value=9.4e-07 Score=79.02 Aligned_cols=102 Identities=19% Similarity=0.189 Sum_probs=79.4
Q ss_pred ccEEEEeCCCCEEEecHHH-HhHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhh
Q 025625 16 SYIWLQTADGSIQQVEQEV-AMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~a-a~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~ 94 (250)
..++|.. +|+.|.+++.+ |.+|++++.|+.. ++.+.....|.|+ ++++.+++.+++|++....
T Consensus 175 ~Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~-~~~e~~~~~i~l~-~~~~~~f~~~L~~iYt~~~------------- 238 (312)
T 3hqi_A 175 TDCCLCV-AGQEFQAHKAILAARSPVFSAMFEH-EMEESKKNRVEIN-DVEPEVFKEMMCFIYTGKA------------- 238 (312)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC------CCSEEEEC-SSCHHHHHHHHHHHHHSCC-------------
T ss_pred CceEEEE-CCEEEeHHHHHHHHcCHHHHHHhcc-CccccCCceEEec-CCCHHHHHHHHHhhcCCCC-------------
Confidence 4688876 78999999999 4789999998753 2333345679999 8999999999999998652
Q ss_pred hhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHHHHhCCCH
Q 025625 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 136 (250)
Q Consensus 95 eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~IkGKT~ 136 (250)
.++...+.+|+.||++|+++.|..+|...+...+.-.+.
T Consensus 239 ---~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~ 277 (312)
T 3hqi_A 239 ---PNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENA 277 (312)
T ss_dssp ---TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTH
T ss_pred ---CChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHH
Confidence 223478999999999999999999999988764443333
No 27
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=98.36 E-value=1.7e-07 Score=73.36 Aligned_cols=92 Identities=10% Similarity=0.201 Sum_probs=73.5
Q ss_pred ccEEEEeCCCCEEEecHHHH-hHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhh
Q 025625 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~aa-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~ 94 (250)
..|+|.. +|+.|.+++.++ ..|++++.|+... .. +...|.+|.+|+...++.+++|++...
T Consensus 30 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~-~~--e~~~i~l~~~v~~~~f~~lL~~iYtg~-------------- 91 (124)
T 2ihc_A 30 CDVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQ-AD--GELNITLPEEVTVKGFEPLIQFAYTAK-------------- 91 (124)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC------CEEEECCTTSCHHHHHHHHHHHHHSE--------------
T ss_pred cCEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCC-CC--CCceEeecCCcCHHHHHHHHHHhcCCC--------------
Confidence 5678866 589999999994 6899999998633 21 245688864799999999999999865
Q ss_pred hhhcCChHHHHhhhhhcccCCCchHHHHHHHHH
Q 025625 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 127 (250)
Q Consensus 95 eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~V 127 (250)
+.++.+.+.+|+.||++|+|+.|.+.|++.+
T Consensus 92 --~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 92 --LILSKENVDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp --EEEETTTHHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred --cccCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 2345677999999999999999999998754
No 28
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=98.27 E-value=1.5e-06 Score=67.51 Aligned_cols=83 Identities=13% Similarity=0.160 Sum_probs=68.8
Q ss_pred ccEEEEeCCCCEEEecHHHH-hHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhh
Q 025625 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~aa-~~S~~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~ 94 (250)
..++|.. +|+.|.+++.++ ..|++++.|+... ...|.++ +|++.+++.+++|++.....
T Consensus 32 ~Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~------~~~i~l~-~~~~~~f~~~l~~~Ytg~~~------------ 91 (116)
T 3fkc_A 32 CDVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA------GQVVELS-FIRAEIFAEILNYIYSSKIV------------ 91 (116)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC------CSEEEEC-SSCHHHHHHHHHHHTTSCCC------------
T ss_pred eeEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeC-CCCHHHHHHHHHhhcCCCcC------------
Confidence 5678875 689999999994 7899999987532 4579998 89999999999999875521
Q ss_pred hhhcCChHHHHhhhhhcccCCCchHHH
Q 025625 95 KFIRMDTKRLCELTSAADSLQLKPLVD 121 (250)
Q Consensus 95 eFl~id~~~L~eLi~AAnyL~I~~Lld 121 (250)
.++.+.+.+|+.||++|+|++|.+
T Consensus 92 ---~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 92 ---RVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp ---SCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred ---CCCHHHHHHHHHHHHHhCccccCc
Confidence 357788999999999999999875
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=87.42 E-value=1.3 Score=33.49 Aligned_cols=96 Identities=10% Similarity=0.193 Sum_probs=64.7
Q ss_pred ccEEEEeCCCCEEEecHHHHhHc--HHHHHHHhhc-CCC--CCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcc
Q 025625 16 SYIWLQTADGSIQQVEQEVAMFC--PLICQEVIQK-GMG--SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERK 90 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~aa~~S--~~I~~ml~~~-~~~--~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~ 90 (250)
..|+|- -.|+.|.++...+..- ..+..|+... ... ......+=+ +-++.++..|+.|++..+-..+.
T Consensus 6 ~~v~LN-VGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi--DRdp~~F~~IL~~lr~g~l~~p~----- 77 (107)
T 3drz_A 6 KWVRLN-VGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI--DRDPTYFGPVLNYLRHGKLVINK----- 77 (107)
T ss_dssp CEEEEE-ETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE--CSCHHHHHHHHHHHHHSCCCCCT-----
T ss_pred CEEEEE-ECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe--cCChHHHHHHHHHhCCCeeCCCC-----
Confidence 455554 4599999999998653 3677775422 111 112345656 58999999999999986532110
Q ss_pred hhhhhhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHH
Q 025625 91 SFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 129 (250)
Q Consensus 91 ~wD~eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~ 129 (250)
++. ...|...|.|.+|.+|+++|-..|..
T Consensus 78 -------~~~---~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 78 -------DLA---EEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp -------TSC---HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred -------CCC---HHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 112 24678899999999999999877653
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=62.32 E-value=6.4 Score=33.51 Aligned_cols=102 Identities=11% Similarity=0.197 Sum_probs=67.4
Q ss_pred CCCCCccEEEEeCCCCEEEecHHHHhHc--HHHHHHHhhc-CCC--CCCCcccccCCCCCHHHHHHHHHHHHhccCCCCC
Q 025625 11 PEMMKSYIWLQTADGSIQQVEQEVAMFC--PLICQEVIQK-GMG--SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSS 85 (250)
Q Consensus 11 pe~~~~~I~L~SsDG~~f~V~~~aa~~S--~~I~~ml~~~-~~~--~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s 85 (250)
|...+..|+|- -.|..|.++...+..- ..+..|+... .+. .+....+=+ +-++..+..|+.|++...-.-+.
T Consensus 7 ~g~~~~~V~LN-VGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI--DRDP~~F~~ILnyLRtG~L~lP~ 83 (202)
T 3drx_A 7 PGSVSKWVRLN-VGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI--DRDPTYFGPVLNYLRHGKLVINK 83 (202)
T ss_dssp SSCCCCEEEEE-ETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE--CSCSTTHHHHHHHHHHSCCCCCT
T ss_pred CCCCCCEEEEE-ECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe--cCChHHHHHHHHHhcCCccCCCC
Confidence 44445667764 4599999998887653 2566665322 111 112445656 47999999999999986532110
Q ss_pred chhcchhhhhhhcCChHHHHhhhhhcccCCCchHHHHHHHHHHHH
Q 025625 86 NKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARI 130 (250)
Q Consensus 86 ~~~i~~wD~eFl~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~ 130 (250)
++. ...|...|.|.+|.+|+++|-..+...
T Consensus 84 ------------~~~---~~~l~eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 84 ------------DLA---EEGVLEEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp ------------TSC---HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ------------CCC---HHHHHHHHHHCCcHHHHHHHHHHHHHH
Confidence 112 235788999999999999999888753
No 31
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=40.97 E-value=16 Score=28.27 Aligned_cols=92 Identities=11% Similarity=0.077 Sum_probs=57.9
Q ss_pred ccEEEEeCCCCEEEecHHHHhHcH--HHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhh
Q 025625 16 SYIWLQTADGSIQQVEQEVAMFCP--LICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (250)
Q Consensus 16 ~~I~L~SsDG~~f~V~~~aa~~S~--~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD 93 (250)
..|+| --.|..|.++...+..-+ .+.. .............+-+ +-++..++-|+.|++.-+-.-+ .
T Consensus 13 ~~V~L-NVGG~~F~t~~~TL~~~p~S~L~~-~~~~~~~~~~~g~~Fi--DRdp~~F~~ILnflR~G~l~~p------~-- 80 (124)
T 1s1g_A 13 ELIVL-NVSGRRFQTWRTTLERYPDTLLGS-TEKEFFFNEDTKEYFF--DRDPEVFRCVLNFYRTGKLHYP------R-- 80 (124)
T ss_dssp CEEEE-EETTEEEEEEHHHHTTSTTSSTTS-SGGGGTBCSSSCSEEE--CSCHHHHHHHHHHHHHSCBCCC------T--
T ss_pred CEEEE-EeCCEEEEEeHHHHhcCCCceecc-cCCcccccCCCCcEEE--cCChHHHHHHHHHHhcCCCCCC------C--
Confidence 34554 566999999998875422 1111 0000011113455666 4799999999999998653211 0
Q ss_pred hhhhcCChHHHHhhhhhcccCCCchH-HHHHHHH
Q 025625 94 EKFIRMDTKRLCELTSAADSLQLKPL-VDLTSRA 126 (250)
Q Consensus 94 ~eFl~id~~~L~eLi~AAnyL~I~~L-ldl~c~~ 126 (250)
++ .+-.|...|.|.+|.+| ++.||..
T Consensus 81 ----~~---~~~~l~~Ea~fy~i~~l~l~~cC~~ 107 (124)
T 1s1g_A 81 ----YE---CISAYDDELAFYGILPEIIGDCCYE 107 (124)
T ss_dssp ----TS---CHHHHHHHHHHTTCCGGGBCHHHHH
T ss_pred ----Cc---CHHHHHHHHHHcCCChHHHHHHHHH
Confidence 01 36778999999999998 5888854
No 32
>3mkl_A HTH-type transcriptional regulator GADX; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.15A {Escherichia coli}
Probab=31.16 E-value=1.5e+02 Score=21.50 Aligned_cols=80 Identities=9% Similarity=0.020 Sum_probs=46.3
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCchhcchhhhhhhcCChHHHHhhhhhcccCCCchHHHHH-HHHHHHHHh--CCCHHHH
Q 025625 63 RVNPAMLSLILDYCRFHQVPGSSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLT-SRALARIIE--GKTPEEI 139 (250)
Q Consensus 63 ~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~eFl~id~~~L~eLi~AAnyL~I~~Lldl~-c~~VA~~Ik--GKT~eEI 139 (250)
.+....+.+|++|+..|...+.+ +.++ .+.+.+....|..++... -+....++... ......++. +.+..||
T Consensus 3 ~~~~~~~~~~~~~i~~~~~~~~~---~~~l-A~~~~~S~~~l~r~fk~~-G~s~~~~~~~~Rl~~A~~lL~~~~~si~eI 77 (120)
T 3mkl_A 3 ALQPNMRTRVCTVINNNIAHEWT---LARI-ASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRV 77 (120)
T ss_dssp --CCCHHHHHHHHHHTSTTSCCC---HHHH-HHHTTCCHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHTSTTCCHHHH
T ss_pred cccHHHHHHHHHHHHHhccCCCC---HHHH-HHHHCcCHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 35667889999999988754322 2222 333567777787777663 33333333332 222333443 5678888
Q ss_pred HhHcCCCC
Q 025625 140 REIFHLPD 147 (250)
Q Consensus 140 R~~FgI~~ 147 (250)
-..+|-.+
T Consensus 78 A~~~Gf~~ 85 (120)
T 3mkl_A 78 AVSCGYHS 85 (120)
T ss_dssp HHHTTCSC
T ss_pred HHHHCCCC
Confidence 87777664
No 33
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=29.83 E-value=29 Score=24.70 Aligned_cols=40 Identities=13% Similarity=0.107 Sum_probs=26.1
Q ss_pred hHHHHhhhhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcC
Q 025625 101 TKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFH 144 (250)
Q Consensus 101 ~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~IkGKT~eEIR~~Fg 144 (250)
...+|+-.+|..-.+-+.- -..||..+-|||++|++..|.
T Consensus 15 E~k~fe~ALa~~~~~tp~r----We~IA~~V~gKT~eE~~~hY~ 54 (73)
T 1wgx_A 15 ELQKLHCAFASLPKHKPGF----WSEVAAAVGSRSPEECQRKYM 54 (73)
T ss_dssp HHHHHHHHHHHSCSSSSSH----HHHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCccH----HHHHHHHcCCCCHHHHHHHHH
Confidence 4455555555444443332 357899999999999987554
No 34
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=28.12 E-value=34 Score=25.28 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=27.2
Q ss_pred HHHHHHHHhCCCHHHHHhHcC------C-CCCCChHhhhcccc
Q 025625 124 SRALARIIEGKTPEEIREIFH------L-PDDLTEEEKLEPLK 159 (250)
Q Consensus 124 c~~VA~~IkGKT~eEIR~~Fg------I-~~D~T~EEe~ei~~ 159 (250)
-..||..+.|.|+.++|+.+. | ...+|+||...++.
T Consensus 24 W~~Ia~~~~~Rt~~qcr~Rw~~~L~p~i~~~~WT~eEd~~L~~ 66 (107)
T 2k9n_A 24 WIRISQLMITRNPRQCRERWNNYINPALRTDPWSPEEDMLLDQ 66 (107)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHSSSCCTTCCCCHHHHHHHHH
T ss_pred HHHHhhhcCCCCHHHHHHHHHHHHcccccccccCHHHHHHHHH
Confidence 356888889999999999653 2 23699998876544
No 35
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=28.09 E-value=36 Score=23.86 Aligned_cols=20 Identities=10% Similarity=0.222 Sum_probs=15.5
Q ss_pred HHHHHHHHhCCCHHHHHhHcC
Q 025625 124 SRALARIIEGKTPEEIREIFH 144 (250)
Q Consensus 124 c~~VA~~IkGKT~eEIR~~Fg 144 (250)
-..||..+ |+|++|++..|.
T Consensus 34 W~~IA~~l-gRt~~eV~~~y~ 53 (72)
T 2cqq_A 34 WEKIAHEL-GRSVTDVTTKAK 53 (72)
T ss_dssp HHHHHHHH-TSCHHHHHHHHH
T ss_pred HHHHHHHh-CCCHHHHHHHHH
Confidence 34577776 999999998664
No 36
>1su0_B NIFU like protein ISCU; structural genomics, BSGC structure funded by NI protein structure initiative, PSI; 2.30A {Streptococcus pyogenes} SCOP: d.224.1.2
Probab=27.29 E-value=1.3e+02 Score=24.06 Aligned_cols=70 Identities=14% Similarity=0.102 Sum_probs=42.5
Q ss_pred hhhhhcccCCCchHHHHHH-HHHHHHHhCCCHHHHHhHcCC-----C-CCCChHhhh---cccccccCchHHHHHHHHHH
Q 025625 106 ELTSAADSLQLKPLVDLTS-RALARIIEGKTPEEIREIFHL-----P-DDLTEEEKL---EPLKNTTDDPRIRLLNRLYA 175 (250)
Q Consensus 106 eLi~AAnyL~I~~Lldl~c-~~VA~~IkGKT~eEIR~~FgI-----~-~D~T~EEe~---ei~~~~~~~p~~~~~~~l~~ 175 (250)
+.|..+.|-.-=--+-.++ -.++.+++|||.+|...+... . ++..++++. ..+..+-.+|.-..|--|=-
T Consensus 53 g~I~d~~F~~~GCais~ASaS~mte~v~Gkt~~Ea~~i~~~f~~ml~~~~~~~~~~L~~l~~l~gv~~~p~R~~Ca~La~ 132 (159)
T 1su0_B 53 DKIEDIAFAGNGCTISTASSSMMTDAVIGKSKEEALALADIFSEMVQGQENPAQKELGEAELLAGVAKFPQRIKCSTLAW 132 (159)
T ss_dssp SSEEEEEEEEECCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTTCCCGGGGGGGGGGGGGGGGGCHHHHHHHHHHH
T ss_pred CEEEEEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCCCCchhhhchhhhhcCcccCcchhHHHHHHH
Confidence 3566666666555555555 456789999999999887542 2 234443333 33444445677777776633
No 37
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.72 E-value=36 Score=23.19 Aligned_cols=31 Identities=6% Similarity=0.207 Sum_probs=23.2
Q ss_pred HHHHHHHHhCCCHHHHHhHcC------CC-CCCChHhh
Q 025625 124 SRALARIIEGKTPEEIREIFH------LP-DDLTEEEK 154 (250)
Q Consensus 124 c~~VA~~IkGKT~eEIR~~Fg------I~-~D~T~EEe 154 (250)
-..||..+.|+|+.++|..|. |. ..+|+||.
T Consensus 32 W~~Ia~~l~~Rt~~qcr~Rw~~~L~p~i~~~~wt~eEd 69 (70)
T 2dim_A 32 WSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSGPSS 69 (70)
T ss_dssp HHHHHHHSTTCCHHHHHHHHHHTSCSSSCCCCSCCSCC
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHcCCcccCCCCChHhc
Confidence 467899999999999999653 22 25777764
No 38
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=25.95 E-value=20 Score=28.44 Aligned_cols=91 Identities=11% Similarity=0.077 Sum_probs=57.0
Q ss_pred cEEEEeCCCCEEEecHHHHhHcH--HHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhh
Q 025625 17 YIWLQTADGSIQQVEQEVAMFCP--LICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (250)
Q Consensus 17 ~I~L~SsDG~~f~V~~~aa~~S~--~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~ 94 (250)
.|+| --.|..|.++...+..-+ .+.. .............+-+ +-++..++.|+.|++..+-.-+.
T Consensus 36 ~V~L-NVGG~~F~T~~~TL~~~P~S~L~~-~~~~~~~~~~~g~yFi--DRdp~~F~~ILnflR~G~l~~p~--------- 102 (140)
T 2nz0_B 36 LIVL-NVSGRRFQTWRTTLERYPDTLLGS-TEKEFFFNEDTKEYFF--DRDPEVFRCVLNFYRTGKLHYPR--------- 102 (140)
T ss_dssp EEEE-EETTEEEEEEHHHHHTCTTSTTTS-GGGGGSEETTTTEEEE--CSCHHHHHHHHHHHHHSSBCCCT---------
T ss_pred EEEE-EECCEEEEeeHHHHhcCCCeeecc-cCCcccccCCCCeEEE--eCCcHHHHHHHHHHhcCCcCCCC---------
Confidence 4444 566999999998875422 1111 0000001113455666 47999999999999986532110
Q ss_pred hhhcCChHHHHhhhhhcccCCCchH-HHHHHHH
Q 025625 95 KFIRMDTKRLCELTSAADSLQLKPL-VDLTSRA 126 (250)
Q Consensus 95 eFl~id~~~L~eLi~AAnyL~I~~L-ldl~c~~ 126 (250)
++ .+..|...|.|.+|.+| ++.||..
T Consensus 103 ---~~---~~~~l~eEa~fy~i~~l~l~~CC~~ 129 (140)
T 2nz0_B 103 ---YE---CISAYDDELAFYGILPEIIGDCCYE 129 (140)
T ss_dssp ---TS---CHHHHHHHHHHHTCCGGGBCTTTHH
T ss_pred ---Cc---CHHHHHHHHHHcCCChHHHHHHHHH
Confidence 11 26778899999999998 5667743
No 39
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=25.91 E-value=46 Score=25.68 Aligned_cols=61 Identities=13% Similarity=0.011 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHHhccCCCCCchhcchhhhhhhc--CChHHHHhhhhhcccCCCchHHHHHHHHHHHH
Q 025625 65 NPAMLSLILDYCRFHQVPGSSNKERKSFDEKFIR--MDTKRLCELTSAADSLQLKPLVDLTSRALARI 130 (250)
Q Consensus 65 ss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~eFl~--id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~ 130 (250)
+...+..|+.-+.+..-+ .+...-.+|+. ++.+.+++++..|...+.+.|.+.|..+|+..
T Consensus 101 ~~~~~~~ll~~A~~~~~~-----~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~ 163 (172)
T 3htm_A 101 LDKMADDLLAAADKYALE-----RLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYH 163 (172)
T ss_dssp GGGTHHHHHHHHHHTTCH-----HHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 334455566666555422 34445556664 78889999999999999999999999999874
No 40
>3g5o_A Uncharacterized protein RV2865; heterotetramer, 1:1 ratio, structural genomics, PSI-2, prote structure initiative; 2.00A {Mycobacterium tuberculosis}
Probab=25.19 E-value=83 Score=23.47 Aligned_cols=49 Identities=22% Similarity=0.261 Sum_probs=38.7
Q ss_pred CChHHHHhhhhhcccCCCchHHHHHHHHHHHHHhCC--CHHHHHhHcCCCC
Q 025625 99 MDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGK--TPEEIREIFHLPD 147 (250)
Q Consensus 99 id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~IkGK--T~eEIR~~FgI~~ 147 (250)
++.+..-.|....+.|..+.|.....+.+++.-.|+ |.+|+++.+|+..
T Consensus 47 ~s~e~ye~l~etl~LL~~~~~~~~L~~a~~~~~~G~~~s~eev~~~lgl~~ 97 (108)
T 3g5o_A 47 VGADEWESLQETLYWLAQPGIRESIAEADADIASGRTYGEDEIRAEFGVPR 97 (108)
T ss_dssp EEHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHTCEECHHHHHHHHTCCC
T ss_pred ecHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHcCCCcCHHHHHHHhCCCc
Confidence 344455556666677888889999999999888886 8999999999974
No 41
>3tnt_A SARS coronavirus main protease; 3C-like protease, hydrolase-hydrolase inhibitor CO; HET: G85; 1.59A {Sars coronavirus} PDB: 1uk2_A 1uk3_A 1uk4_A 1z1i_A 2a5a_A 1uj1_A* 2bx3_A 2bx4_A 2c3s_A 2a5i_A 2gt7_A* 2gx4_A* 2gz7_A* 2gz8_A* 2gz9_A 2duc_A 2hob_A* 2v6n_A* 2z3c_A* 2z3d_A* ...
Probab=24.33 E-value=42 Score=30.02 Aligned_cols=95 Identities=13% Similarity=0.140 Sum_probs=60.9
Q ss_pred cccCCCCCHHHHHHHHHHHHhccCCC---------CCchhcchhhhh--hhcCChH--HHHhhhhhcccCCCchHHHHHH
Q 025625 58 ISLPQRVNPAMLSLILDYCRFHQVPG---------SSNKERKSFDEK--FIRMDTK--RLCELTSAADSLQLKPLVDLTS 124 (250)
Q Consensus 58 IpLp~~Vss~iL~kIIeyC~~Hk~~~---------~s~~~i~~wD~e--Fl~id~~--~L~eLi~AAnyL~I~~Lldl~c 124 (250)
..++ .-+--.-.-|+.|++-+--.. .+.++...|-.. |-.+..+ ..+..+.|..=..+..|+...-
T Consensus 191 ~Q~~-~~d~~~T~NVvAwLYAAilng~~Wfl~~~~~sv~dfN~WA~~ngft~~~~~~~~~~~~Laa~TGVsVe~lL~aI~ 269 (306)
T 3tnt_A 191 AQAA-GTDTTITLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALK 269 (306)
T ss_dssp CCCC-CCCCBCHHHHHHHHHHHHHTTCCTTCCSCCCCHHHHHHHHHHTTBCCCCHHHHHHTHHHHHHHTCCHHHHHHHHH
T ss_pred hhcc-CccceeehhHHHHHHHHHhcCCeEEeeccEecHHHHHHHHHhcCCccccccHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 3443 234444556889988765332 133455666433 4345554 4588899999999999988776
Q ss_pred HHHHHHHhCCCHHHHHhHcCCCCCCChHhhhc
Q 025625 125 RALARIIEGKTPEEIREIFHLPDDLTEEEKLE 156 (250)
Q Consensus 125 ~~VA~~IkGKT~eEIR~~FgI~~D~T~EEe~e 156 (250)
+.+++=..|++ |--...++++|||+|--.
T Consensus 270 ~ll~~g~~G~~---IlG~~~leDE~Tp~~V~~ 298 (306)
T 3tnt_A 270 ELLQNGMNGRT---ILGSTILEDEFTPFDVVR 298 (306)
T ss_dssp HHHHHCCTTCC---BTTBSSCCCSCCHHHHHH
T ss_pred HHHhcCcCCce---eeccccccccCCHHHHHH
Confidence 66666566777 444555788999987544
No 42
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=23.98 E-value=18 Score=26.06 Aligned_cols=46 Identities=17% Similarity=0.360 Sum_probs=33.0
Q ss_pred cCChHHHHhhhhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCC
Q 025625 98 RMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPD 147 (250)
Q Consensus 98 ~id~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~IkGKT~eEIR~~FgI~~ 147 (250)
......+|+-.+|..--+-+.-. ..||..+-|||++|++..+.++.
T Consensus 24 T~eE~K~FE~ALa~yp~~tpdRW----ekIA~~VpGKT~eEVk~hY~~~~ 69 (74)
T 4eef_G 24 KFSENIAFEIALSFTNKDTPDRW----KKVAQYVKGRTPEEVKKHYELEH 69 (74)
T ss_dssp CTTHHHHHHHHTSSSCSSCCSSS----TTTGGGSCSSCHHHHHGGGC---
T ss_pred CHHHHHHHHHHHHHCCCCCCcHH----HHHHHHcCCCCHHHHHHHHHHhh
Confidence 34678899988888755544333 46788888999999999988753
No 43
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=23.65 E-value=96 Score=21.20 Aligned_cols=35 Identities=14% Similarity=0.192 Sum_probs=24.4
Q ss_pred CCHHHHHhHcCCCCC---CChHhhhcccccc--cCchHHH
Q 025625 134 KTPEEIREIFHLPDD---LTEEEKLEPLKNT--TDDPRIR 168 (250)
Q Consensus 134 KT~eEIR~~FgI~~D---~T~EEe~ei~~~~--~~~p~~~ 168 (250)
.|.+|=+.+|||..+ .+.++-.+..+.. .++|+-.
T Consensus 1 mt~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG 40 (65)
T 2guz_B 1 MTLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG 40 (65)
T ss_dssp CCHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT
T ss_pred CCHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC
Confidence 367788889999887 7777766655543 4577743
No 44
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=22.76 E-value=34 Score=25.26 Aligned_cols=18 Identities=50% Similarity=0.728 Sum_probs=16.4
Q ss_pred CCCHHHHHhHcCCCCCCC
Q 025625 133 GKTPEEIREIFHLPDDLT 150 (250)
Q Consensus 133 GKT~eEIR~~FgI~~D~T 150 (250)
|.||+|=|..||++.|+.
T Consensus 43 gltpeeYR~kwGlp~dyP 60 (87)
T 2jsp_A 43 SMTPEEYREKWDLPVDYP 60 (87)
T ss_dssp CSCHHHHHHHTTCGGGCC
T ss_pred CCCHHHHHHHhCCCCCCc
Confidence 999999999999998753
No 45
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=22.38 E-value=33 Score=25.09 Aligned_cols=36 Identities=25% Similarity=0.367 Sum_probs=27.0
Q ss_pred HHHHHHHHhCCCHHHHHhHcC------C-CCCCChHhhhcccc
Q 025625 124 SRALARIIEGKTPEEIREIFH------L-PDDLTEEEKLEPLK 159 (250)
Q Consensus 124 c~~VA~~IkGKT~eEIR~~Fg------I-~~D~T~EEe~ei~~ 159 (250)
-..||..+.|+|+.++|..|. + ...+|+||...++.
T Consensus 27 W~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~~~Wt~eEd~~L~~ 69 (105)
T 1gv2_A 27 WSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQ 69 (105)
T ss_dssp HHHHHTTSTTCCHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHH
T ss_pred HHHHhhhhcCCCHHHHHHHHHhccCCcccccCCCHHHHHHHHH
Confidence 456888889999999998653 2 23699998876544
No 46
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=21.90 E-value=22 Score=26.59 Aligned_cols=85 Identities=13% Similarity=0.109 Sum_probs=52.4
Q ss_pred CCCEEEecHHHHhHcH--HHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCchhcchhhhhhhcCCh
Q 025625 24 DGSIQQVEQEVAMFCP--LICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEKFIRMDT 101 (250)
Q Consensus 24 DG~~f~V~~~aa~~S~--~I~~ml~~~~~~~~~~~~IpLp~~Vss~iL~kIIeyC~~Hk~~~~s~~~i~~wD~eFl~id~ 101 (250)
.|..|.++...+..-+ .+..+ ............+-+ +-++..+..|+.|++..+-.-+ . ++
T Consensus 7 GG~~f~t~~~TL~~~p~s~L~~~-~~~~~~~~~~~~~Fi--DRdp~~F~~ILnflR~g~l~~p------~------~~-- 69 (105)
T 1nn7_A 7 SGTRFQTWQDTLERYPDTLLGSS-ERDFFYHPETQQYFF--DRDPDIFRHILNFYRTGKLHYP------R------HE-- 69 (105)
T ss_dssp TTEEEEECHHHHHTSCSSSTTSG-GGGGGEEGGGTEEEE--CSCTTTHHHHHHHHHHSCBCCC------T------TS--
T ss_pred CCEEEEEeHHHHhcCCCcccccc-CCcccccCCCCcEEE--eCCcHHHHHHHHHHhcCCCCCC------C------Cc--
Confidence 5899999988865422 12110 000000112345666 4799999999999998652211 0 11
Q ss_pred HHHHhhhhhcccCCCchH-HHHHHHH
Q 025625 102 KRLCELTSAADSLQLKPL-VDLTSRA 126 (250)
Q Consensus 102 ~~L~eLi~AAnyL~I~~L-ldl~c~~ 126 (250)
.+-.|...|.|.+|.+| ++-||..
T Consensus 70 -~~~~l~~Ea~fy~i~~l~~~~cc~~ 94 (105)
T 1nn7_A 70 -CISAYDEELAFFGLIPEIIGDCCYE 94 (105)
T ss_dssp -CHHHHHHHHHHHTCCSCCBCHHHHH
T ss_pred -CHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 25678899999999998 5777754
No 47
>2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae}
Probab=21.69 E-value=74 Score=29.44 Aligned_cols=44 Identities=23% Similarity=0.240 Sum_probs=28.7
Q ss_pred hHHHHhhhhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcC
Q 025625 101 TKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFH 144 (250)
Q Consensus 101 ~~~L~eLi~AAnyL~I~~Lldl~c~~VA~~IkGKT~eEIR~~Fg 144 (250)
.+.|-.|+.|+++|.+..=..--...+-+..---||.||.+++.
T Consensus 282 ~~~L~~l~Qa~~lLq~~k~~~~d~~~i~~~C~~Ln~~Ql~~il~ 325 (419)
T 2f6h_X 282 TECLQHLIQTAKLLQVRKYTIEDIDILRGICYSLTPAQLQKLIS 325 (419)
T ss_dssp HHHTHHHHHHHHHTTSCCSSHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCchhhHHHHHHHhhcCCHHHHHHHHH
Confidence 45688999999999987622222222334445668888888664
No 48
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=21.52 E-value=61 Score=21.39 Aligned_cols=21 Identities=24% Similarity=0.213 Sum_probs=17.5
Q ss_pred HHHHHHHHhCCCHHHHHhHcC
Q 025625 124 SRALARIIEGKTPEEIREIFH 144 (250)
Q Consensus 124 c~~VA~~IkGKT~eEIR~~Fg 144 (250)
-..||..+.|+|+.++|..|.
T Consensus 31 W~~Ia~~~~~Rt~~qcr~r~~ 51 (60)
T 1x41_A 31 WQDVANQMCTKTKEECEKHYM 51 (60)
T ss_dssp HHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHH
Confidence 467899999999999998663
Done!