Query 025629
Match_columns 250
No_of_seqs 483 out of 1306
Neff 12.2
Searched_HMMs 46136
Date Fri Mar 29 07:48:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025629.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025629hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1455 Lysophospholipase [Lip 100.0 1.7E-32 3.7E-37 189.6 16.5 201 43-243 110-312 (313)
2 PLN02385 hydrolase; alpha/beta 100.0 2.8E-31 6E-36 198.8 19.7 228 18-245 93-347 (349)
3 PLN02298 hydrolase, alpha/beta 100.0 1.2E-28 2.5E-33 183.7 19.6 230 18-247 65-321 (330)
4 PLN02824 hydrolase, alpha/beta 100.0 2.5E-29 5.5E-34 184.5 15.7 222 16-243 33-294 (294)
5 TIGR02240 PHA_depoly_arom poly 100.0 1.1E-28 2.4E-33 179.4 15.4 216 18-244 31-267 (276)
6 PLN02965 Probable pheophorbida 100.0 3.2E-28 7E-33 174.9 15.5 212 18-242 9-252 (255)
7 PRK03592 haloalkane dehalogena 100.0 8.1E-28 1.8E-32 176.6 16.6 223 16-245 31-291 (295)
8 PRK10349 carboxylesterase BioH 100.0 4.5E-28 9.8E-33 174.5 14.2 217 16-242 17-255 (256)
9 PHA02857 monoglyceride lipase; 100.0 2.5E-26 5.4E-31 167.3 20.3 218 18-243 31-273 (276)
10 PRK00870 haloalkane dehalogena 100.0 3.1E-27 6.8E-32 174.0 14.4 215 17-243 51-301 (302)
11 PLN02679 hydrolase, alpha/beta 100.0 3.9E-27 8.5E-32 176.6 15.0 222 16-243 92-357 (360)
12 PRK10673 acyl-CoA esterase; Pr 100.0 9.7E-27 2.1E-31 167.7 16.3 214 17-243 21-255 (255)
13 PRK03204 haloalkane dehalogena 99.9 8.7E-27 1.9E-31 169.8 15.1 213 17-240 39-285 (286)
14 PLN02578 hydrolase 99.9 5.5E-26 1.2E-30 170.3 15.7 219 16-241 90-353 (354)
15 PLN03087 BODYGUARD 1 domain co 99.9 2E-25 4.4E-30 169.9 18.0 215 17-242 206-478 (481)
16 TIGR03611 RutD pyrimidine util 99.9 5.6E-26 1.2E-30 163.9 14.2 215 18-241 19-256 (257)
17 TIGR01738 bioH putative pimelo 99.9 7E-26 1.5E-30 162.2 13.8 213 17-240 9-245 (245)
18 TIGR03056 bchO_mg_che_rel puta 99.9 3.1E-25 6.7E-30 161.9 17.0 217 17-241 33-278 (278)
19 TIGR03343 biphenyl_bphD 2-hydr 99.9 1.5E-25 3.3E-30 163.8 15.0 215 17-241 35-281 (282)
20 PRK10749 lysophospholipase L2; 99.9 1.2E-24 2.5E-29 161.8 19.9 224 18-243 60-329 (330)
21 PLN02652 hydrolase; alpha/beta 99.9 1.9E-24 4.2E-29 162.5 20.2 221 18-246 142-390 (395)
22 TIGR02427 protocat_pcaD 3-oxoa 99.9 1.1E-25 2.4E-30 161.7 11.7 210 18-241 19-251 (251)
23 KOG1454 Predicted hydrolase/ac 99.9 8E-26 1.7E-30 165.3 11.0 221 17-244 63-325 (326)
24 PLN03084 alpha/beta hydrolase 99.9 1.3E-24 2.9E-29 162.4 17.6 218 17-242 132-383 (383)
25 PF12697 Abhydrolase_6: Alpha/ 99.9 1.8E-25 4E-30 158.2 11.8 195 18-227 4-224 (228)
26 PRK08775 homoserine O-acetyltr 99.9 7.9E-26 1.7E-30 169.0 10.0 208 27-244 84-340 (343)
27 PRK11126 2-succinyl-6-hydroxy- 99.9 6.8E-25 1.5E-29 156.9 14.4 208 17-242 7-241 (242)
28 KOG4178 Soluble epoxide hydrol 99.9 5.1E-25 1.1E-29 155.1 12.2 225 12-243 44-320 (322)
29 KOG4409 Predicted hydrolase/ac 99.9 1.8E-24 3.8E-29 152.9 14.6 220 18-242 96-363 (365)
30 COG2267 PldB Lysophospholipase 99.9 6E-24 1.3E-28 154.1 16.9 202 43-245 86-296 (298)
31 PRK06489 hypothetical protein; 99.9 4.4E-24 9.5E-29 160.6 15.8 218 17-244 74-358 (360)
32 TIGR03695 menH_SHCHC 2-succiny 99.9 6.5E-24 1.4E-28 152.4 14.3 212 18-241 7-251 (251)
33 PLN02894 hydrolase, alpha/beta 99.9 3.1E-23 6.8E-28 157.2 17.1 223 17-242 110-388 (402)
34 PRK07581 hypothetical protein; 99.9 5E-24 1.1E-28 159.4 12.0 71 168-244 266-337 (339)
35 PRK00175 metX homoserine O-ace 99.9 9E-24 1.9E-28 159.5 13.2 194 44-245 130-376 (379)
36 TIGR01250 pro_imino_pep_2 prol 99.9 1.2E-22 2.7E-27 148.9 15.6 213 17-241 30-288 (288)
37 TIGR01392 homoserO_Ac_trn homo 99.9 1.7E-23 3.6E-28 157.0 10.8 190 44-241 110-351 (351)
38 TIGR01607 PST-A Plasmodium sub 99.9 7.6E-22 1.7E-26 146.3 18.9 230 3-242 67-332 (332)
39 PLN02211 methyl indole-3-aceta 99.9 1.2E-22 2.6E-27 146.9 14.1 211 17-242 23-269 (273)
40 PRK14875 acetoin dehydrogenase 99.9 2.5E-23 5.5E-28 157.8 10.4 204 17-242 136-370 (371)
41 COG1647 Esterase/lipase [Gener 99.9 1.1E-21 2.3E-26 130.0 15.9 165 53-241 78-242 (243)
42 PLN02980 2-oxoglutarate decarb 99.9 9.6E-23 2.1E-27 176.2 14.1 221 17-246 1376-1642(1655)
43 PRK06765 homoserine O-acetyltr 99.9 1.7E-21 3.7E-26 146.1 14.9 195 43-242 143-387 (389)
44 PLN02511 hydrolase 99.9 4.1E-21 8.9E-26 145.2 12.1 220 18-243 106-365 (388)
45 PF00561 Abhydrolase_1: alpha/ 99.9 8.9E-22 1.9E-26 139.7 7.8 188 43-236 27-228 (230)
46 KOG2382 Predicted alpha/beta h 99.9 4E-20 8.6E-25 130.7 15.5 224 13-244 53-314 (315)
47 TIGR01249 pro_imino_pep_1 prol 99.9 1.5E-20 3.2E-25 138.6 12.5 177 43-221 78-290 (306)
48 PRK10985 putative hydrolase; P 99.8 1.1E-19 2.4E-24 134.9 11.6 188 48-244 119-321 (324)
49 KOG2984 Predicted hydrolase [G 99.8 1.2E-20 2.5E-25 123.2 4.8 197 20-243 51-276 (277)
50 PF00326 Peptidase_S9: Prolyl 99.8 7.5E-19 1.6E-23 123.0 13.7 200 3-246 7-212 (213)
51 TIGR01836 PHA_synth_III_C poly 99.8 8.9E-19 1.9E-23 131.5 14.2 195 46-243 122-350 (350)
52 PRK11071 esterase YqiA; Provis 99.8 1.9E-18 4E-23 117.9 13.5 171 18-241 7-189 (190)
53 PRK05855 short chain dehydroge 99.8 7E-19 1.5E-23 141.3 12.0 218 17-243 30-292 (582)
54 PRK05077 frsA fermentation/res 99.8 1.3E-17 2.9E-22 126.8 16.3 150 58-244 263-413 (414)
55 TIGR03100 hydr1_PEP hydrolase, 99.8 6.1E-18 1.3E-22 122.6 13.8 178 44-242 83-274 (274)
56 PRK13604 luxD acyl transferase 99.8 1.5E-16 3.2E-21 113.9 15.9 150 44-222 93-247 (307)
57 PF12695 Abhydrolase_5: Alpha/ 99.7 7.2E-17 1.6E-21 106.2 11.1 127 18-219 5-145 (145)
58 PRK10566 esterase; Provisional 99.7 3E-16 6.5E-21 112.7 15.1 180 18-244 33-249 (249)
59 PRK07868 acyl-CoA synthetase; 99.7 2.5E-16 5.3E-21 132.6 15.3 71 172-245 292-363 (994)
60 TIGR01838 PHA_synth_I poly(R)- 99.7 6.8E-16 1.5E-20 119.4 14.7 179 45-226 247-462 (532)
61 PRK11460 putative hydrolase; P 99.7 9.3E-16 2E-20 108.2 12.6 107 59-245 102-210 (232)
62 KOG1552 Predicted alpha/beta h 99.7 7.9E-16 1.7E-20 105.4 10.8 143 43-246 112-255 (258)
63 COG0596 MhpC Predicted hydrola 99.7 1.4E-15 3.1E-20 110.1 12.9 217 17-241 26-280 (282)
64 PLN02872 triacylglycerol lipas 99.6 2.5E-15 5.4E-20 113.1 11.8 71 172-247 318-393 (395)
65 PF01738 DLH: Dienelactone hyd 99.6 2.2E-14 4.7E-19 100.8 15.0 173 2-244 33-218 (218)
66 COG3208 GrsT Predicted thioest 99.6 4.2E-15 9.1E-20 101.2 10.4 173 43-241 56-234 (244)
67 COG1506 DAP2 Dipeptidyl aminop 99.6 1.4E-14 3E-19 116.1 14.3 200 2-246 415-619 (620)
68 PF02230 Abhydrolase_2: Phosph 99.6 9.5E-15 2.1E-19 102.3 10.2 112 57-243 102-215 (216)
69 TIGR02821 fghA_ester_D S-formy 99.6 5.7E-14 1.2E-18 102.0 14.3 137 57-243 135-274 (275)
70 KOG4667 Predicted esterase [Li 99.6 1.2E-14 2.7E-19 96.3 9.6 200 4-245 56-260 (269)
71 COG2021 MET2 Homoserine acetyl 99.6 8.3E-15 1.8E-19 105.6 9.6 195 43-242 129-367 (368)
72 PF03096 Ndr: Ndr family; Int 99.6 2.3E-14 5.1E-19 100.7 10.8 188 43-242 82-278 (283)
73 PLN02442 S-formylglutathione h 99.6 1.2E-13 2.6E-18 100.5 14.2 136 43-221 126-264 (283)
74 KOG4391 Predicted alpha/beta h 99.6 5.3E-15 1.2E-19 98.2 6.3 138 58-245 147-284 (300)
75 TIGR01849 PHB_depoly_PhaZ poly 99.5 1.4E-13 3E-18 102.8 12.1 199 43-243 152-406 (406)
76 KOG2931 Differentiation-relate 99.5 3.9E-13 8.5E-18 93.5 12.7 188 43-242 105-305 (326)
77 PF06342 DUF1057: Alpha/beta h 99.5 6.8E-13 1.5E-17 92.4 13.6 174 17-203 40-238 (297)
78 PLN00021 chlorophyllase 99.5 3.6E-13 7.8E-18 98.6 12.7 169 18-246 58-286 (313)
79 COG0429 Predicted hydrolase of 99.5 2.1E-13 4.6E-18 96.9 10.7 193 43-244 131-341 (345)
80 PF06821 Ser_hydrolase: Serine 99.5 4.7E-13 1E-17 89.2 11.8 137 26-224 13-158 (171)
81 COG0400 Predicted esterase [Ge 99.5 2.4E-13 5.1E-18 92.7 10.3 123 43-244 80-206 (207)
82 PF08538 DUF1749: Protein of u 99.5 2E-13 4.2E-18 97.1 10.1 195 43-241 87-303 (303)
83 KOG2564 Predicted acetyltransf 99.5 7.5E-13 1.6E-17 91.5 10.0 208 17-243 79-327 (343)
84 PF08840 BAAT_C: BAAT / Acyl-C 99.5 2.6E-13 5.6E-18 94.3 7.4 163 59-245 21-212 (213)
85 PF05448 AXE1: Acetyl xylan es 99.4 6.4E-12 1.4E-16 92.3 14.1 162 43-243 156-320 (320)
86 COG2945 Predicted hydrolase of 99.4 1.2E-12 2.6E-17 85.5 8.7 153 2-241 52-205 (210)
87 PF05728 UPF0227: Uncharacteri 99.4 1.8E-11 3.8E-16 82.6 14.3 143 45-240 44-186 (187)
88 KOG1838 Alpha/beta hydrolase [ 99.4 1.3E-11 2.9E-16 91.1 14.4 177 43-224 181-368 (409)
89 TIGR01839 PHA_synth_II poly(R) 99.4 1.3E-11 2.9E-16 95.2 13.9 172 46-220 274-482 (560)
90 PF00975 Thioesterase: Thioest 99.4 3.3E-11 7.1E-16 85.5 13.2 195 18-240 6-229 (229)
91 COG0412 Dienelactone hydrolase 99.3 7E-11 1.5E-15 83.3 12.9 116 59-245 111-235 (236)
92 PF09752 DUF2048: Uncharacteri 99.3 1.4E-10 3.1E-15 84.0 14.0 170 54-240 169-346 (348)
93 COG3545 Predicted esterase of 99.3 3.6E-11 7.8E-16 77.8 9.2 137 43-242 40-178 (181)
94 TIGR01840 esterase_phb esteras 99.3 1.9E-11 4.1E-16 85.5 7.8 38 59-96 94-131 (212)
95 COG3243 PhaC Poly(3-hydroxyalk 99.3 4.1E-10 8.9E-15 83.0 13.7 195 44-244 165-400 (445)
96 PRK10115 protease 2; Provision 99.2 5.3E-10 1.2E-14 90.7 15.7 180 4-221 468-655 (686)
97 PF06500 DUF1100: Alpha/beta h 99.2 5.4E-11 1.2E-15 88.5 9.2 190 5-244 213-410 (411)
98 PRK10162 acetyl esterase; Prov 99.2 6.7E-10 1.4E-14 82.5 14.5 66 178-245 249-317 (318)
99 COG4757 Predicted alpha/beta h 99.2 2.9E-11 6.3E-16 81.5 6.1 225 3-240 50-280 (281)
100 COG3571 Predicted hydrolase of 99.2 3.2E-09 6.9E-14 67.6 14.3 133 43-242 72-210 (213)
101 PF06028 DUF915: Alpha/beta hy 99.2 4.1E-10 8.8E-15 79.7 11.2 177 17-242 16-254 (255)
102 KOG3043 Predicted hydrolase re 99.2 2.5E-10 5.5E-15 76.7 9.2 131 41-244 101-241 (242)
103 PF10230 DUF2305: Uncharacteri 99.1 6.2E-09 1.4E-13 75.0 13.5 51 49-99 71-126 (266)
104 COG3458 Acetyl esterase (deace 99.1 1.1E-09 2.4E-14 75.9 8.9 163 39-243 153-317 (321)
105 PRK05371 x-prolyl-dipeptidyl a 99.0 2E-08 4.4E-13 82.4 15.5 73 169-246 447-522 (767)
106 TIGR03101 hydr2_PEP hydrolase, 99.0 9.8E-10 2.1E-14 78.7 6.6 43 54-96 93-135 (266)
107 TIGR03230 lipo_lipase lipoprot 99.0 1.4E-09 3.1E-14 82.6 6.8 79 18-96 47-155 (442)
108 KOG2624 Triglyceride lipase-ch 99.0 9.5E-09 2.1E-13 77.2 10.8 236 4-243 100-398 (403)
109 PF12740 Chlorophyllase2: Chlo 99.0 2.9E-08 6.3E-13 69.8 12.5 108 58-225 89-211 (259)
110 PF06057 VirJ: Bacterial virul 98.9 1.8E-08 3.8E-13 67.0 10.0 54 43-96 51-108 (192)
111 PF03403 PAF-AH_p_II: Platelet 98.9 1.8E-08 3.8E-13 76.1 11.3 118 55-245 223-360 (379)
112 PF07859 Abhydrolase_3: alpha/ 98.9 8.4E-09 1.8E-13 72.3 9.1 55 43-97 49-112 (211)
113 cd00707 Pancreat_lipase_like P 98.9 2E-09 4.3E-14 78.0 5.8 80 18-97 42-149 (275)
114 PRK10252 entF enterobactin syn 98.9 3.9E-08 8.4E-13 86.7 14.0 81 15-95 1071-1171(1296)
115 KOG4627 Kynurenine formamidase 98.9 1.4E-09 3.1E-14 72.2 3.8 133 43-224 118-252 (270)
116 KOG2551 Phospholipase/carboxyh 98.9 5.3E-08 1.2E-12 65.8 10.8 63 172-243 158-220 (230)
117 KOG2100 Dipeptidyl aminopeptid 98.9 7.3E-08 1.6E-12 79.0 13.1 161 39-247 585-751 (755)
118 COG3319 Thioesterase domains o 98.9 3.8E-07 8.1E-12 64.7 15.0 80 17-96 5-104 (257)
119 PRK04940 hypothetical protein; 98.9 1.1E-07 2.3E-12 63.2 11.3 117 60-241 60-178 (180)
120 KOG3253 Predicted alpha/beta h 98.8 3.9E-08 8.5E-13 75.7 9.7 128 53-245 243-380 (784)
121 PF03959 FSH1: Serine hydrolas 98.8 1.4E-08 3.1E-13 70.8 5.9 47 174-223 158-205 (212)
122 PLN02733 phosphatidylcholine-s 98.8 1.8E-08 4E-13 77.1 6.7 73 24-96 106-202 (440)
123 KOG2112 Lysophospholipase [Lip 98.8 7.9E-08 1.7E-12 64.5 8.6 111 58-242 91-203 (206)
124 PF03583 LIP: Secretory lipase 98.8 1.6E-06 3.4E-11 63.5 16.1 65 177-248 219-286 (290)
125 KOG1515 Arylacetamide deacetyl 98.8 1.4E-06 2.9E-11 64.4 15.5 167 43-243 143-335 (336)
126 PF07819 PGAP1: PGAP1-like pro 98.7 1.8E-07 3.8E-12 65.7 9.7 41 58-98 83-126 (225)
127 PF11339 DUF3141: Protein of u 98.7 4.8E-07 1E-11 69.0 12.4 54 46-99 125-179 (581)
128 COG4814 Uncharacterized protei 98.7 1.2E-06 2.5E-11 60.6 12.9 176 18-242 51-286 (288)
129 TIGR00976 /NonD putative hydro 98.7 1.4E-07 3E-12 75.5 9.8 39 59-97 96-134 (550)
130 PF10142 PhoPQ_related: PhoPQ- 98.7 4.2E-07 9.1E-12 67.7 11.4 153 57-244 169-321 (367)
131 PF02273 Acyl_transf_2: Acyl t 98.7 1.6E-07 3.4E-12 64.6 7.7 176 19-221 37-239 (294)
132 KOG3975 Uncharacterized conser 98.6 4.9E-07 1.1E-11 62.3 9.3 65 171-240 236-300 (301)
133 KOG2281 Dipeptidyl aminopeptid 98.6 1.2E-06 2.7E-11 68.3 12.4 192 4-242 670-866 (867)
134 PF02129 Peptidase_S15: X-Pro 98.6 6.6E-07 1.4E-11 65.2 10.4 87 6-99 53-140 (272)
135 KOG2565 Predicted hydrolases o 98.6 3.4E-07 7.5E-12 66.7 8.2 76 18-93 158-262 (469)
136 PF08386 Abhydrolase_4: TAP-li 98.6 3.7E-07 8E-12 55.7 7.1 60 177-242 34-93 (103)
137 COG0657 Aes Esterase/lipase [L 98.6 4.1E-06 8.9E-11 62.4 13.5 168 43-241 130-308 (312)
138 KOG1551 Uncharacterized conser 98.5 1.8E-06 3.9E-11 60.1 10.0 170 56-243 191-366 (371)
139 COG4188 Predicted dienelactone 98.5 2.6E-07 5.7E-12 67.7 5.9 57 171-227 245-302 (365)
140 COG4099 Predicted peptidase [G 98.5 3.9E-07 8.4E-12 64.5 6.3 38 58-95 267-304 (387)
141 PF10503 Esterase_phd: Esteras 98.5 2.4E-06 5.2E-11 59.4 10.0 46 51-96 86-133 (220)
142 KOG4840 Predicted hydrolases o 98.5 4E-07 8.6E-12 61.6 5.9 56 43-98 86-147 (299)
143 PF07224 Chlorophyllase: Chlor 98.5 2.8E-06 6.2E-11 59.2 10.0 80 18-97 52-159 (307)
144 PTZ00472 serine carboxypeptida 98.5 8.2E-06 1.8E-10 63.7 13.1 63 177-243 364-459 (462)
145 PF04301 DUF452: Protein of un 98.4 6.8E-06 1.5E-10 56.5 10.6 78 15-97 14-92 (213)
146 smart00824 PKS_TE Thioesterase 98.4 3E-06 6.5E-11 59.2 9.1 42 54-95 58-102 (212)
147 KOG3847 Phospholipase A2 (plat 98.4 4.8E-06 1E-10 59.6 9.1 43 53-96 234-276 (399)
148 PLN02606 palmitoyl-protein thi 98.3 3.6E-05 7.7E-10 55.6 11.6 36 60-95 95-132 (306)
149 KOG3101 Esterase D [General fu 98.2 1.1E-06 2.5E-11 59.0 3.4 56 43-98 124-179 (283)
150 PF05057 DUF676: Putative seri 98.2 6.7E-06 1.5E-10 57.7 6.8 62 18-79 10-97 (217)
151 cd00741 Lipase Lipase. Lipase 98.2 4.5E-06 9.7E-11 55.3 5.4 50 47-96 15-68 (153)
152 PLN02633 palmitoyl protein thi 98.2 4.3E-05 9.4E-10 55.2 10.3 35 60-94 94-130 (314)
153 PF12715 Abhydrolase_7: Abhydr 98.2 8.3E-06 1.8E-10 60.6 6.9 38 57-95 223-260 (390)
154 PF01674 Lipase_2: Lipase (cla 98.1 5.9E-06 1.3E-10 57.4 5.4 36 44-80 60-95 (219)
155 PF02450 LCAT: Lecithin:choles 98.1 1.2E-05 2.6E-10 61.6 6.4 38 59-96 118-161 (389)
156 PF11187 DUF2974: Protein of u 98.1 3.5E-05 7.6E-10 54.0 8.0 50 47-97 72-125 (224)
157 COG1770 PtrB Protease II [Amin 98.0 0.00024 5.2E-09 56.4 12.3 92 6-99 473-566 (682)
158 PF12048 DUF3530: Protein of u 98.0 0.00015 3.3E-09 53.7 10.8 127 47-243 180-309 (310)
159 COG0627 Predicted esterase [Ge 98.0 0.00015 3.2E-09 53.5 10.4 61 39-99 130-191 (316)
160 COG1073 Hydrolases of the alph 98.0 8.1E-05 1.7E-09 55.0 9.2 73 171-244 225-298 (299)
161 PF05705 DUF829: Eukaryotic pr 98.0 0.00032 6.9E-09 50.3 11.7 62 175-240 176-240 (240)
162 PF00756 Esterase: Putative es 97.9 2.2E-05 4.7E-10 56.6 5.1 36 62-97 117-152 (251)
163 PF01764 Lipase_3: Lipase (cla 97.9 2.2E-05 4.9E-10 51.1 4.6 38 43-80 47-84 (140)
164 COG3150 Predicted esterase [Ge 97.9 0.00046 1E-08 45.0 10.0 51 43-96 42-92 (191)
165 COG1075 LipA Predicted acetylt 97.8 6.2E-05 1.3E-09 56.5 6.5 54 43-96 110-165 (336)
166 cd00519 Lipase_3 Lipase (class 97.8 3.7E-05 7.9E-10 54.6 4.7 53 43-95 111-168 (229)
167 PLN00413 triacylglycerol lipas 97.7 5.5E-05 1.2E-09 57.9 4.3 35 45-79 269-303 (479)
168 PF02089 Palm_thioest: Palmito 97.7 0.00094 2E-08 48.0 10.1 35 60-94 80-115 (279)
169 COG2819 Predicted hydrolase of 97.7 8.8E-05 1.9E-09 52.5 4.9 39 58-96 135-173 (264)
170 PF05990 DUF900: Alpha/beta hy 97.7 0.00029 6.3E-09 50.0 7.5 54 43-96 76-138 (233)
171 TIGR03502 lipase_Pla1_cef extr 97.7 0.00011 2.4E-09 60.4 6.1 79 18-96 455-602 (792)
172 PF10340 DUF2424: Protein of u 97.7 0.0056 1.2E-07 46.2 14.2 56 43-98 178-238 (374)
173 PF00151 Lipase: Lipase; Inte 97.6 0.00015 3.3E-09 54.1 6.0 42 57-98 147-190 (331)
174 PRK10439 enterobactin/ferric e 97.6 0.00011 2.4E-09 56.6 5.3 37 59-95 287-323 (411)
175 PF06259 Abhydrolase_8: Alpha/ 97.6 0.00019 4.1E-09 48.2 5.6 54 43-96 91-145 (177)
176 PF05677 DUF818: Chlamydia CHL 97.6 0.0029 6.3E-08 46.6 11.2 35 47-81 199-236 (365)
177 PLN02162 triacylglycerol lipas 97.5 0.00023 5E-09 54.5 5.4 35 45-79 263-297 (475)
178 PLN02517 phosphatidylcholine-s 97.4 0.00024 5.3E-09 56.0 4.2 40 56-95 209-263 (642)
179 PLN02454 triacylglycerol lipas 97.3 0.00044 9.6E-09 52.5 5.1 38 43-80 209-248 (414)
180 COG1505 Serine proteases of th 97.3 0.0015 3.3E-08 51.5 7.3 183 19-244 459-647 (648)
181 COG2382 Fes Enterochelin ester 97.3 0.0029 6.2E-08 45.8 8.1 37 60-96 177-213 (299)
182 PF01083 Cutinase: Cutinase; 97.2 0.00069 1.5E-08 46.0 4.3 54 43-96 64-123 (179)
183 PLN02571 triacylglycerol lipas 97.2 0.0005 1.1E-08 52.3 3.7 37 44-80 208-246 (413)
184 KOG2237 Predicted serine prote 97.1 0.005 1.1E-07 49.1 9.1 55 43-97 530-586 (712)
185 KOG3724 Negative regulator of 97.1 0.0017 3.6E-08 52.9 6.5 37 60-96 182-221 (973)
186 PF06850 PHB_depo_C: PHB de-po 97.1 0.0014 3E-08 44.1 4.9 66 177-243 134-202 (202)
187 PLN02934 triacylglycerol lipas 97.1 0.00072 1.6E-08 52.5 3.9 37 43-79 304-340 (515)
188 COG4287 PqaA PhoPQ-activated p 97.1 0.0063 1.4E-07 45.2 8.3 161 51-242 225-386 (507)
189 PLN02408 phospholipase A1 97.0 0.00089 1.9E-08 50.2 3.8 36 45-80 183-220 (365)
190 COG4553 DepA Poly-beta-hydroxy 97.0 0.021 4.6E-07 41.2 10.0 68 177-245 339-409 (415)
191 COG4782 Uncharacterized protei 96.9 0.0021 4.6E-08 47.6 4.7 54 43-96 174-235 (377)
192 PF11288 DUF3089: Protein of u 96.9 0.0018 4E-08 44.5 4.1 39 43-81 77-116 (207)
193 KOG1553 Predicted alpha/beta h 96.9 0.0013 2.8E-08 48.3 3.5 40 57-97 308-347 (517)
194 KOG3967 Uncharacterized conser 96.8 0.011 2.4E-07 40.5 7.3 46 53-98 183-230 (297)
195 PF11144 DUF2920: Protein of u 96.8 0.11 2.3E-06 39.8 13.1 54 43-96 163-220 (403)
196 KOG2369 Lecithin:cholesterol a 96.8 0.002 4.3E-08 49.4 4.1 52 43-94 165-224 (473)
197 PLN02324 triacylglycerol lipas 96.8 0.0017 3.7E-08 49.4 3.6 37 44-80 197-235 (415)
198 PF05577 Peptidase_S28: Serine 96.7 0.004 8.6E-08 48.9 5.6 55 43-97 93-150 (434)
199 PLN02310 triacylglycerol lipas 96.7 0.0039 8.4E-08 47.5 5.1 35 46-80 191-229 (405)
200 COG3509 LpqC Poly(3-hydroxybut 96.7 0.0065 1.4E-07 43.9 5.8 50 46-95 128-179 (312)
201 PLN02802 triacylglycerol lipas 96.7 0.0023 4.9E-08 49.9 3.7 36 45-80 313-350 (509)
202 PF05277 DUF726: Protein of un 96.5 0.0069 1.5E-07 45.3 5.4 40 57-96 217-261 (345)
203 PLN02847 triacylglycerol lipas 96.5 0.0044 9.5E-08 49.3 4.4 33 48-80 239-271 (633)
204 PLN02719 triacylglycerol lipas 96.5 0.0033 7.2E-08 49.0 3.6 37 44-80 277-318 (518)
205 PLN02753 triacylglycerol lipas 96.5 0.0034 7.3E-08 49.1 3.6 36 44-79 291-331 (531)
206 PLN02761 lipase class 3 family 96.5 0.0033 7.1E-08 49.2 3.5 36 44-79 272-313 (527)
207 PF07082 DUF1350: Protein of u 96.4 0.013 2.9E-07 41.4 5.8 35 60-94 90-124 (250)
208 COG2936 Predicted acyl esteras 96.4 0.034 7.3E-07 44.4 8.4 40 58-97 122-161 (563)
209 PLN03037 lipase class 3 family 96.3 0.004 8.7E-08 48.7 3.4 35 46-80 300-338 (525)
210 KOG4569 Predicted lipase [Lipi 96.3 0.0046 1E-07 46.5 3.7 37 44-80 155-191 (336)
211 KOG2183 Prolylcarboxypeptidase 96.3 0.005 1.1E-07 46.5 3.3 52 43-94 148-201 (492)
212 KOG2541 Palmitoyl protein thio 96.2 0.048 1E-06 38.9 7.7 35 60-94 92-127 (296)
213 COG5153 CVT17 Putative lipase 96.1 0.013 2.8E-07 42.1 4.6 50 43-94 259-308 (425)
214 KOG4540 Putative lipase essent 96.1 0.013 2.8E-07 42.1 4.6 50 43-94 259-308 (425)
215 PF00450 Peptidase_S10: Serine 96.0 0.0099 2.1E-07 46.4 4.3 61 177-241 330-414 (415)
216 COG2830 Uncharacterized protei 96.0 0.035 7.6E-07 36.2 5.7 36 59-96 56-91 (214)
217 PLN02213 sinapoylglucose-malat 95.9 0.042 9E-07 41.3 6.9 62 177-243 233-317 (319)
218 KOG1282 Serine carboxypeptidas 95.4 0.095 2.1E-06 41.1 7.3 63 177-243 363-448 (454)
219 PLN02209 serine carboxypeptida 95.4 0.081 1.8E-06 41.5 6.9 61 177-242 351-434 (437)
220 PLN03016 sinapoylglucose-malat 95.4 0.091 2E-06 41.2 7.1 62 177-243 347-431 (433)
221 COG4947 Uncharacterized protei 94.1 0.032 6.9E-07 36.9 1.6 44 53-96 94-137 (227)
222 PF07519 Tannase: Tannase and 93.5 0.14 2.9E-06 40.8 4.5 66 177-244 353-428 (474)
223 cd00312 Esterase_lipase Estera 93.3 0.059 1.3E-06 43.3 2.2 47 50-96 164-214 (493)
224 PF12146 Hydrolase_4: Putative 92.0 0.013 2.8E-07 33.8 -2.2 20 7-26 21-40 (79)
225 PF07519 Tannase: Tannase and 91.9 0.69 1.5E-05 37.0 6.4 54 43-96 95-151 (474)
226 PF00135 COesterase: Carboxyle 91.9 0.82 1.8E-05 37.2 7.1 48 49-96 195-246 (535)
227 PF03283 PAE: Pectinacetyleste 90.8 2.1 4.5E-05 33.0 7.7 39 59-97 155-197 (361)
228 KOG2385 Uncharacterized conser 89.5 1.1 2.4E-05 35.5 5.4 41 57-97 444-489 (633)
229 PF08237 PE-PPE: PE-PPE domain 89.2 0.75 1.6E-05 32.7 4.0 37 58-94 46-88 (225)
230 COG3946 VirJ Type IV secretory 88.9 0.93 2E-05 34.8 4.5 39 44-82 310-348 (456)
231 PF09949 DUF2183: Uncharacteri 87.8 3.4 7.3E-05 25.1 5.6 43 48-90 53-97 (100)
232 PF05576 Peptidase_S37: PS-10 87.7 1.7 3.6E-05 33.7 5.1 69 169-241 343-412 (448)
233 PF00450 Peptidase_S10: Serine 87.2 2.1 4.5E-05 33.6 5.8 55 43-97 116-183 (415)
234 COG2272 PnbA Carboxylesterase 86.5 0.88 1.9E-05 35.9 3.3 48 49-96 167-218 (491)
235 KOG2029 Uncharacterized conser 85.6 0.85 1.8E-05 36.9 2.8 36 59-94 525-571 (697)
236 KOG2182 Hydrolytic enzymes of 83.4 2.4 5.2E-05 33.6 4.3 55 43-97 152-209 (514)
237 KOG1202 Animal-type fatty acid 83.2 2.3 5E-05 38.0 4.4 53 43-95 2164-2219(2376)
238 PF00698 Acyl_transf_1: Acyl t 82.9 0.87 1.9E-05 34.3 1.9 29 51-79 75-103 (318)
239 KOG4372 Predicted alpha/beta h 82.2 0.73 1.6E-05 35.4 1.2 33 46-78 136-168 (405)
240 smart00827 PKS_AT Acyl transfe 81.4 1.7 3.6E-05 32.4 2.9 27 53-79 75-101 (298)
241 TIGR03131 malonate_mdcH malona 80.6 1.9 4.1E-05 32.1 2.9 28 52-79 68-95 (295)
242 TIGR03712 acc_sec_asp2 accesso 80.4 29 0.00063 28.0 11.5 45 50-96 345-391 (511)
243 cd07225 Pat_PNPLA6_PNPLA7 Pata 79.1 2.8 6E-05 31.5 3.4 29 54-82 37-65 (306)
244 PLN02213 sinapoylglucose-malat 78.7 4.5 9.7E-05 30.7 4.4 51 47-97 35-98 (319)
245 PLN03016 sinapoylglucose-malat 78.6 2.5 5.4E-05 33.5 3.1 52 45-96 147-211 (433)
246 TIGR00128 fabD malonyl CoA-acy 77.7 2.4 5.3E-05 31.4 2.8 28 53-80 75-103 (290)
247 PRK10279 hypothetical protein; 77.6 2.9 6.3E-05 31.3 3.1 29 54-82 27-55 (300)
248 PLN02209 serine carboxypeptida 76.8 3.7 8E-05 32.6 3.6 53 44-96 148-213 (437)
249 cd07198 Patatin Patatin-like p 76.8 3.6 7.9E-05 27.8 3.2 26 57-82 23-48 (172)
250 cd07207 Pat_ExoU_VipD_like Exo 75.1 4.2 9.1E-05 28.0 3.2 25 57-81 24-48 (194)
251 COG1752 RssA Predicted esteras 74.5 4.1 8.9E-05 30.6 3.2 30 53-82 32-61 (306)
252 cd07227 Pat_Fungal_NTE1 Fungal 73.1 5.1 0.00011 29.5 3.3 27 55-81 33-59 (269)
253 cd07210 Pat_hypo_W_succinogene 72.8 5.8 0.00013 28.2 3.5 25 58-82 26-50 (221)
254 COG0796 MurI Glutamate racemas 72.5 20 0.00043 26.4 6.0 63 177-244 5-67 (269)
255 PF10081 Abhydrolase_9: Alpha/ 69.9 7.3 0.00016 28.7 3.4 37 60-96 109-148 (289)
256 PF10605 3HBOH: 3HB-oligomer h 69.7 5.8 0.00013 32.6 3.1 38 61-98 286-324 (690)
257 cd07212 Pat_PNPLA9 Patatin-lik 69.2 7.7 0.00017 29.3 3.6 20 63-82 35-54 (312)
258 TIGR02816 pfaB_fam PfaB family 68.1 5.4 0.00012 32.6 2.8 27 55-81 260-286 (538)
259 cd07209 Pat_hypo_Ecoli_Z1214_l 68.0 7.5 0.00016 27.5 3.2 26 57-82 23-48 (215)
260 KOG2521 Uncharacterized conser 66.2 57 0.0012 25.3 7.5 65 176-244 224-291 (350)
261 cd07228 Pat_NTE_like_bacteria 65.5 11 0.00023 25.7 3.5 25 58-82 26-50 (175)
262 COG2939 Carboxypeptidase C (ca 65.5 14 0.0003 29.7 4.4 38 60-97 198-238 (498)
263 COG0331 FabD (acyl-carrier-pro 63.3 8.7 0.00019 29.0 2.9 22 58-79 83-104 (310)
264 COG2939 Carboxypeptidase C (ca 62.4 13 0.00027 30.0 3.7 30 208-242 461-490 (498)
265 cd07205 Pat_PNPLA6_PNPLA7_NTE1 62.2 13 0.00029 25.1 3.5 24 58-81 26-49 (175)
266 KOG1516 Carboxylesterase and r 62.1 11 0.00024 31.0 3.6 45 50-94 183-231 (545)
267 cd07208 Pat_hypo_Ecoli_yjju_li 61.1 15 0.00033 26.9 3.9 23 61-83 28-50 (266)
268 COG3887 Predicted signaling pr 60.6 24 0.00051 29.2 4.9 53 39-94 319-377 (655)
269 PF14253 AbiH: Bacteriophage a 60.3 5.7 0.00012 29.1 1.5 16 58-73 233-248 (270)
270 cd07230 Pat_TGL4-5_like Triacy 59.6 7.4 0.00016 30.8 2.1 37 48-85 90-126 (421)
271 PRK04148 hypothetical protein; 57.8 49 0.0011 21.5 5.2 36 45-80 3-38 (134)
272 PF00070 Pyr_redox: Pyridine n 54.2 38 0.00082 19.2 4.0 35 61-98 1-35 (80)
273 cd07224 Pat_like Patatin-like 53.8 19 0.00042 25.8 3.3 34 48-82 16-51 (233)
274 cd07218 Pat_iPLA2 Calcium-inde 53.8 24 0.00052 25.6 3.8 20 63-82 33-52 (245)
275 cd07229 Pat_TGL3_like Triacylg 53.7 12 0.00025 29.3 2.2 33 55-87 106-138 (391)
276 PRK00865 glutamate racemase; P 53.1 58 0.0013 23.9 5.7 60 178-242 6-65 (261)
277 PF12242 Eno-Rase_NADH_b: NAD( 53.0 43 0.00093 19.3 3.8 26 57-82 37-62 (78)
278 cd07232 Pat_PLPL Patain-like p 52.9 11 0.00023 29.8 2.0 40 48-88 84-123 (407)
279 cd07231 Pat_SDP1-like Sugar-De 52.8 6.8 0.00015 29.5 0.9 33 48-81 85-117 (323)
280 PF09994 DUF2235: Uncharacteri 52.1 28 0.0006 25.9 3.9 28 53-80 84-112 (277)
281 PF01734 Patatin: Patatin-like 51.9 27 0.00059 23.6 3.8 23 58-80 25-47 (204)
282 cd07217 Pat17_PNPLA8_PNPLA9_li 49.2 15 0.00033 28.2 2.3 18 63-80 44-61 (344)
283 cd07204 Pat_PNPLA_like Patatin 47.9 28 0.0006 25.3 3.3 20 63-82 34-53 (243)
284 COG4667 Predicted esterase of 47.6 14 0.00031 27.0 1.8 42 48-90 28-70 (292)
285 cd07206 Pat_TGL3-4-5_SDP1 Tria 47.0 21 0.00046 26.8 2.6 35 48-83 86-120 (298)
286 cd07221 Pat_PNPLA3 Patatin-lik 47.0 34 0.00074 25.0 3.7 21 62-82 34-54 (252)
287 TIGR00067 glut_race glutamate 46.9 86 0.0019 23.0 5.7 46 194-241 12-57 (251)
288 cd07211 Pat_PNPLA8 Patatin-lik 46.9 16 0.00035 27.5 2.1 17 63-79 44-60 (308)
289 cd07213 Pat17_PNPLA8_PNPLA9_li 45.9 19 0.0004 26.9 2.3 19 63-81 37-55 (288)
290 cd01714 ETF_beta The electron 45.1 32 0.00069 24.1 3.2 37 44-81 94-134 (202)
291 PF05577 Peptidase_S28: Serine 44.6 44 0.00096 26.7 4.3 40 178-222 377-416 (434)
292 PF00091 Tubulin: Tubulin/FtsZ 41.9 85 0.0018 22.2 5.0 53 42-94 106-166 (216)
293 COG3673 Uncharacterized conser 40.5 1.2E+02 0.0026 23.3 5.5 30 51-80 112-142 (423)
294 cd07220 Pat_PNPLA2 Patatin-lik 38.6 45 0.00098 24.4 3.2 21 62-82 38-58 (249)
295 PLN02752 [acyl-carrier protein 38.1 23 0.00051 27.2 1.8 18 62-79 126-143 (343)
296 cd01819 Patatin_and_cPLA2 Pata 37.4 45 0.00098 22.1 2.9 19 60-78 28-46 (155)
297 TIGR02069 cyanophycinase cyano 37.4 1.7E+02 0.0036 21.5 6.4 36 182-217 3-38 (250)
298 PLN02733 phosphatidylcholine-s 36.7 21 0.00045 28.6 1.4 51 182-242 371-421 (440)
299 cd07216 Pat17_PNPLA8_PNPLA9_li 36.7 23 0.00049 26.8 1.5 17 63-79 45-61 (309)
300 cd00382 beta_CA Carbonic anhyd 36.1 56 0.0012 20.6 3.0 31 45-75 44-74 (119)
301 COG4850 Uncharacterized conser 36.1 1.1E+02 0.0023 23.6 4.6 44 51-94 269-314 (373)
302 PF06500 DUF1100: Alpha/beta h 35.7 62 0.0013 25.7 3.7 62 177-243 189-255 (411)
303 cd07199 Pat17_PNPLA8_PNPLA9_li 35.2 28 0.0006 25.5 1.8 18 63-80 37-54 (258)
304 KOG1282 Serine carboxypeptidas 34.5 40 0.00086 27.2 2.5 57 43-99 148-217 (454)
305 PF08484 Methyltransf_14: C-me 34.5 1.5E+02 0.0032 20.0 5.6 37 58-94 67-103 (160)
306 KOG2214 Predicted esterase of 33.2 17 0.00038 29.2 0.5 38 51-89 194-231 (543)
307 cd07214 Pat17_isozyme_like Pat 33.2 29 0.00062 26.8 1.6 18 63-80 46-63 (349)
308 PF01118 Semialdhyde_dh: Semia 33.0 78 0.0017 19.8 3.4 32 61-93 1-33 (121)
309 KOG1283 Serine carboxypeptidas 32.6 36 0.00077 25.9 1.9 56 43-98 102-169 (414)
310 PRK15219 carbonic anhydrase; P 32.2 33 0.00071 25.0 1.6 35 44-78 127-161 (245)
311 PRK15416 lipopolysaccharide co 31.9 50 0.0011 23.2 2.4 21 51-71 143-163 (201)
312 KOG4388 Hormone-sensitive lipa 31.5 81 0.0018 26.4 3.8 39 59-97 468-510 (880)
313 TIGR03607 patatin-related prot 31.4 64 0.0014 28.0 3.4 22 58-79 64-85 (739)
314 cd03379 beta_CA_cladeD Carboni 31.1 56 0.0012 21.4 2.5 30 45-74 41-70 (142)
315 cd07222 Pat_PNPLA4 Patatin-lik 30.9 78 0.0017 23.0 3.4 17 63-79 34-50 (246)
316 TIGR02813 omega_3_PfaA polyket 30.5 45 0.00097 33.6 2.6 27 52-78 666-692 (2582)
317 cd07215 Pat17_PNPLA8_PNPLA9_li 30.4 35 0.00076 26.1 1.7 17 63-79 43-59 (329)
318 PF07643 DUF1598: Protein of u 30.0 1.2E+02 0.0026 17.8 3.7 35 45-79 28-62 (84)
319 KOG1202 Animal-type fatty acid 30.0 63 0.0014 29.9 3.1 22 50-71 572-593 (2376)
320 PRK14046 malate--CoA ligase su 28.7 53 0.0012 25.9 2.4 32 59-90 118-149 (392)
321 cd03145 GAT1_cyanophycinase Ty 28.4 2.2E+02 0.0048 20.2 6.7 37 180-216 2-38 (217)
322 cd00883 beta_CA_cladeA Carboni 28.4 91 0.002 21.5 3.2 33 46-78 67-99 (182)
323 PF12122 DUF3582: Protein of u 28.3 1.5E+02 0.0032 18.2 3.9 51 193-244 10-62 (101)
324 PF12083 DUF3560: Domain of un 28.2 47 0.001 21.3 1.7 25 44-68 26-50 (126)
325 COG0813 DeoD Purine-nucleoside 27.8 1.9E+02 0.0041 20.8 4.6 41 57-99 53-97 (236)
326 PRK07877 hypothetical protein; 27.7 1.1E+02 0.0023 26.7 4.1 41 52-94 100-140 (722)
327 PF11009 DUF2847: Protein of u 27.5 1.3E+02 0.0027 18.7 3.3 34 47-80 7-40 (105)
328 COG0420 SbcD DNA repair exonuc 27.3 93 0.002 24.5 3.5 22 171-192 69-90 (390)
329 TIGR03169 Nterm_to_SelD pyridi 26.9 88 0.0019 24.2 3.3 35 61-95 1-35 (364)
330 PF12641 Flavodoxin_3: Flavodo 25.9 2.1E+02 0.0046 19.2 5.0 39 179-219 41-79 (160)
331 COG3675 Predicted lipase [Lipi 25.8 44 0.00096 25.0 1.4 41 49-90 163-208 (332)
332 COG2201 CheB Chemotaxis respon 25.4 1.3E+02 0.0028 23.4 3.8 28 59-86 156-184 (350)
333 COG5023 Tubulin [Cytoskeleton] 25.3 2.5E+02 0.0053 22.2 5.1 54 43-96 113-174 (443)
334 PF00484 Pro_CA: Carbonic anhy 25.0 1.8E+02 0.0038 19.2 4.1 34 45-78 40-73 (153)
335 PF15566 Imm18: Immunity prote 25.0 91 0.002 16.4 2.0 27 46-72 7-33 (52)
336 TIGR02356 adenyl_thiF thiazole 24.4 1.2E+02 0.0026 21.2 3.4 44 49-95 11-55 (202)
337 COG0746 MobA Molybdopterin-gua 24.2 2.6E+02 0.0056 19.6 6.8 71 169-243 78-150 (192)
338 PF14714 KH_dom-like: KH-domai 24.0 1.6E+02 0.0034 17.1 3.5 28 176-203 37-64 (80)
339 PF13709 DUF4159: Domain of un 23.9 1.8E+02 0.0039 20.6 4.1 38 177-216 53-90 (207)
340 PF04816 DUF633: Family of unk 23.1 1.1E+02 0.0024 21.6 3.0 41 48-90 55-99 (205)
341 cd00884 beta_CA_cladeB Carboni 23.1 1.2E+02 0.0026 21.1 3.1 32 47-78 74-105 (190)
342 PF01494 FAD_binding_3: FAD bi 23.0 1.2E+02 0.0027 22.9 3.5 22 61-82 3-24 (356)
343 PHA00026 cp coat protein 22.9 83 0.0018 18.9 1.9 34 208-245 5-38 (129)
344 PLN00416 carbonate dehydratase 22.5 1.3E+02 0.0028 22.2 3.3 33 46-78 126-158 (258)
345 PRK14852 hypothetical protein; 22.5 2.6E+02 0.0056 25.5 5.4 42 51-95 324-366 (989)
346 PRK03482 phosphoglycerate muta 22.2 1.8E+02 0.004 20.4 4.0 31 46-78 129-159 (215)
347 PLN03006 carbonate dehydratase 22.2 1.2E+02 0.0026 23.0 3.0 31 47-77 159-189 (301)
348 COG3051 CitF Citrate lyase, al 21.9 61 0.0013 25.2 1.5 35 1-38 83-117 (513)
349 PRK10673 acyl-CoA esterase; Pr 21.8 3E+02 0.0066 19.6 6.9 62 177-242 16-77 (255)
350 PLN03058 dynein light chain ty 21.8 41 0.00088 21.6 0.6 32 44-75 69-101 (128)
351 TIGR03531 selenium_SpcS O-phos 21.8 1.1E+02 0.0024 24.7 3.1 61 14-77 77-141 (444)
352 PF05576 Peptidase_S37: PS-10 21.2 27 0.00058 27.6 -0.4 38 59-96 133-170 (448)
353 PF01221 Dynein_light: Dynein 20.6 59 0.0013 19.1 1.1 30 44-73 36-66 (89)
354 PF02610 Arabinose_Isome: L-ar 20.6 3.9E+02 0.0083 21.1 5.4 64 169-242 89-166 (359)
355 PRK08644 thiamine biosynthesis 20.5 1.5E+02 0.0033 21.0 3.3 41 51-94 20-61 (212)
356 PF10561 UPF0565: Uncharacteri 20.2 1.1E+02 0.0024 23.2 2.6 21 60-80 193-213 (303)
357 cd01014 nicotinamidase_related 20.0 2.7E+02 0.0059 18.3 4.3 47 49-95 89-135 (155)
No 1
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-32 Score=189.56 Aligned_cols=201 Identities=49% Similarity=0.816 Sum_probs=181.9
Q ss_pred hhchHhHHHHh--hccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCC
Q 025629 43 FPALTGWLMMS--SSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPK 120 (250)
Q Consensus 43 ~~d~~~~~~~~--~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (250)
+.|...++..+ .++....+.+++||||||.|++.++.++|+..+|+|+++|.....+...+.+....+...+..+++.
T Consensus 110 v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~ 189 (313)
T KOG1455|consen 110 VDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPT 189 (313)
T ss_pred HHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCc
Confidence 44444455443 3344567899999999999999999999999999999999999999888889999999999999999
Q ss_pred CcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHH
Q 025629 121 HKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALY 200 (250)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~ 200 (250)
....+........++++..+.....+...|...+++++..++++...++.+.+.++++|.+++||+.|.++.++.++.++
T Consensus 190 wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Ly 269 (313)
T KOG1455|consen 190 WKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELY 269 (313)
T ss_pred eeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHH
Confidence 98888888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhc
Q 025629 201 EKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 201 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
+...+.++++.+|||.-|.++..++++-.+.+...|.+||+++
T Consensus 270 e~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 270 EKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9998899999999999999998777777888999999999876
No 2
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=2.8e-31 Score=198.77 Aligned_cols=228 Identities=65% Similarity=0.965 Sum_probs=153.2
Q ss_pred ccccccchh-hHHHhhHHhhh-hhhhh-------------------hhchHhHHHHhhccCC------CCcEEEEEeccc
Q 025629 18 WHHLDTEFS-LWITLDLAFQQ-VFMAT-------------------FPALTGWLMMSSSIIP------TSKVFLFGQSLG 70 (250)
Q Consensus 18 ~hg~~~~~~-~~~~~~~~l~~-~~~~~-------------------~~d~~~~~~~~~~~~~------~~~~~lvGhS~G 70 (250)
.||++.+.. .|..+...|.+ .|+++ +.++++++.++++.+. ..+++|+|||||
T Consensus 93 lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmG 172 (349)
T PLN02385 93 CHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMG 172 (349)
T ss_pred ECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccc
Confidence 699987765 46778888875 47776 3345555555555443 347999999999
Q ss_pred hHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccc
Q 025629 71 GAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVY 150 (250)
Q Consensus 71 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (250)
|.+++.++.++|++++++|+++|.........+..........+....+.....+........+...............+
T Consensus 173 G~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (349)
T PLN02385 173 GAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAY 252 (349)
T ss_pred hHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCccee
Confidence 99999999999999999999998765443332333333333333333332222111111111122211111111111222
Q ss_pred cCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHH
Q 025629 151 KDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMII 230 (250)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 230 (250)
............+....+....+.++++|+|+|+|++|.++|++.++.+++.+..+++++++++++||.++.++|+++.+
T Consensus 253 ~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~ 332 (349)
T PLN02385 253 KDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIF 332 (349)
T ss_pred CCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHH
Confidence 22233444445554444566778899999999999999999999999999988656799999999999999999998888
Q ss_pred HHHHHHHHHHhhcCC
Q 025629 231 RVFADIISWLDDHSR 245 (250)
Q Consensus 231 ~~~~~i~~fl~~~~~ 245 (250)
.+++.|.+||+++..
T Consensus 333 ~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 333 QVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHHHHHhcc
Confidence 899999999998864
No 3
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=1.2e-28 Score=183.68 Aligned_cols=230 Identities=38% Similarity=0.647 Sum_probs=143.5
Q ss_pred ccccccch-hhHHHhhHHhhh-hhhhh-------------------hhchHhHHHHhhccCC------CCcEEEEEeccc
Q 025629 18 WHHLDTEF-SLWITLDLAFQQ-VFMAT-------------------FPALTGWLMMSSSIIP------TSKVFLFGQSLG 70 (250)
Q Consensus 18 ~hg~~~~~-~~~~~~~~~l~~-~~~~~-------------------~~d~~~~~~~~~~~~~------~~~~~lvGhS~G 70 (250)
.||++.+. ..|......|.. .|+|+ ++++.+|+..+++.+. ..+++|+|||||
T Consensus 65 lHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmG 144 (330)
T PLN02298 65 VHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMG 144 (330)
T ss_pred EcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecch
Confidence 48887553 234455555655 46776 2334555555655442 347999999999
Q ss_pred hHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccc
Q 025629 71 GAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVY 150 (250)
Q Consensus 71 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (250)
|.+++.++.++|++|+++|+++|.........+..........+....+.....+........................+
T Consensus 145 G~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (330)
T PLN02298 145 GAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRY 224 (330)
T ss_pred hHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCcccc
Confidence 99999999999999999999998765443222222222222223333332211111000000000000000111111112
Q ss_pred cCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHH
Q 025629 151 KDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMII 230 (250)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 230 (250)
......................+.++++|+|+++|++|.++|++.++.+++.++.+++++++++++||.++.++|+...+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~ 304 (330)
T PLN02298 225 NGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIE 304 (330)
T ss_pred CCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHH
Confidence 22222223333333333455678899999999999999999999999999988656899999999999999999988778
Q ss_pred HHHHHHHHHHhhcCCCC
Q 025629 231 RVFADIISWLDDHSRSS 247 (250)
Q Consensus 231 ~~~~~i~~fl~~~~~~~ 247 (250)
.+.+.|.+||+++....
T Consensus 305 ~~~~~i~~fl~~~~~~~ 321 (330)
T PLN02298 305 IVRRDILSWLNERCTGK 321 (330)
T ss_pred HHHHHHHHHHHHhccCC
Confidence 89999999999887543
No 4
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=2.5e-29 Score=184.50 Aligned_cols=222 Identities=18% Similarity=0.193 Sum_probs=141.5
Q ss_pred ccccccccchhhHHHhhHHhhhhhhhh-------------------------hhchHhHHHHhhccCCCCcEEEEEeccc
Q 025629 16 GSWHHLDTEFSLWITLDLAFQQVFMAT-------------------------FPALTGWLMMSSSIIPTSKVFLFGQSLG 70 (250)
Q Consensus 16 g~~hg~~~~~~~~~~~~~~l~~~~~~~-------------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~G 70 (250)
--.||++.+...|..+++.|+..|+++ ++++++++.+++++++.++++|+|||||
T Consensus 33 lllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~G 112 (294)
T PLN02824 33 VLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVG 112 (294)
T ss_pred EEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHH
Confidence 347999999999999999999888887 2566778888999999999999999999
Q ss_pred hHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcc--------cCcc---hhhhhhhcccch
Q 025629 71 GAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKL--------VPQK---DLAEAAFRDLKN 139 (250)
Q Consensus 71 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~ 139 (250)
|.+++.+|.++|++|+++|++++....................+...+..... .... ......+.....
T Consensus 113 g~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (294)
T PLN02824 113 GVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSA 192 (294)
T ss_pred HHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhh
Confidence 99999999999999999999998643211110001111111111111000000 0000 000000110000
Q ss_pred --hhhhhcccccccCchhhHHHHHHHH--hhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCC
Q 025629 140 --RELTKYNVIVYKDKPRLRTALELLK--TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKD 215 (250)
Q Consensus 140 --~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (250)
......................+.. ........+.++++|+|+|+|++|.++|.+.++.+.+.. ++.+++++++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~ 270 (294)
T PLN02824 193 VTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFD--AVEDFIVLPG 270 (294)
T ss_pred ccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcC--CccceEEeCC
Confidence 0000000000001111111112111 111223567889999999999999999999988877766 7789999999
Q ss_pred CCcccccCCchHHHHHHHHHHHHHHhhc
Q 025629 216 AFHSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 216 ~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
+||+++.|+|++ +.+.|.+|++++
T Consensus 271 ~gH~~~~e~p~~----~~~~i~~fl~~~ 294 (294)
T PLN02824 271 VGHCPQDEAPEL----VNPLIESFVARH 294 (294)
T ss_pred CCCChhhhCHHH----HHHHHHHHHhcC
Confidence 999999999998 999999999764
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.96 E-value=1.1e-28 Score=179.45 Aligned_cols=216 Identities=17% Similarity=0.171 Sum_probs=140.6
Q ss_pred ccccccchhhHHHhhHHhhhhhhhh------------------hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHh
Q 025629 18 WHHLDTEFSLWITLDLAFQQVFMAT------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~~~~~~------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
.||++.+...|..+++.|.+.|+++ ++++++++.++++.++.++++|+||||||.+++.+|.
T Consensus 31 lHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~ 110 (276)
T TIGR02240 31 FNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAH 110 (276)
T ss_pred EeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHH
Confidence 7999999999999999999888887 4577788888999999899999999999999999999
Q ss_pred hCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccc--hhhhhhcccccccCchhhH
Q 025629 80 KQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLK--NRELTKYNVIVYKDKPRLR 157 (250)
Q Consensus 80 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 157 (250)
++|++|+++|+++++................ .......... ... ......+.... ...................
T Consensus 111 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (276)
T TIGR02240 111 DYPERCKKLILAATAAGAVMVPGKPKVLMMM-ASPRRYIQPS--HGI-HIAPDIYGGAFRRDPELAMAHASKVRSGGKLG 186 (276)
T ss_pred HCHHHhhheEEeccCCccccCCCchhHHHHh-cCchhhhccc--ccc-chhhhhccceeeccchhhhhhhhhcccCCCch
Confidence 9999999999999876432111111111000 0000000000 000 00000000000 0000000000000000111
Q ss_pred HHHHHHHhh-HHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHH
Q 025629 158 TALELLKTT-EGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADI 236 (250)
Q Consensus 158 ~~~~~~~~~-~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i 236 (250)
......... ....+.+.++++|+|+|+|++|+++|++..+.+.+.+ ++++++++++ ||+++.++|++ +++.|
T Consensus 187 ~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~--~~~~~~~i~~-gH~~~~e~p~~----~~~~i 259 (276)
T TIGR02240 187 YYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRI--PNAELHIIDD-GHLFLITRAEA----VAPII 259 (276)
T ss_pred HHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhC--CCCEEEEEcC-CCchhhccHHH----HHHHH
Confidence 111111111 1223557899999999999999999999999999998 8899999985 99999999998 99999
Q ss_pred HHHHhhcC
Q 025629 237 ISWLDDHS 244 (250)
Q Consensus 237 ~~fl~~~~ 244 (250)
.+|+++.-
T Consensus 260 ~~fl~~~~ 267 (276)
T TIGR02240 260 MKFLAEER 267 (276)
T ss_pred HHHHHHhh
Confidence 99998753
No 6
>PLN02965 Probable pheophorbidase
Probab=99.96 E-value=3.2e-28 Score=174.94 Aligned_cols=212 Identities=18% Similarity=0.226 Sum_probs=134.9
Q ss_pred ccccccchhhHHHhhHHh-hhhhhhh-------------------hhchHhHHHHhhccCCC-CcEEEEEeccchHHHHH
Q 025629 18 WHHLDTEFSLWITLDLAF-QQVFMAT-------------------FPALTGWLMMSSSIIPT-SKVFLFGQSLGGAVALK 76 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l-~~~~~~~-------------------~~d~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~ 76 (250)
.||++.+...|..+++.| ..+|+++ ++++++++.++++.++. ++++++||||||.+++.
T Consensus 9 lHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~ 88 (255)
T PLN02965 9 VHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTE 88 (255)
T ss_pred ECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHH
Confidence 589999999999999999 4558777 45677788899999876 59999999999999999
Q ss_pred HHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhc----CCCcccCc------chhh-hhhhcccchhhhhhc
Q 025629 77 VHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANIL----PKHKLVPQ------KDLA-EAAFRDLKNRELTKY 145 (250)
Q Consensus 77 ~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------~~~~-~~~~~~~~~~~~~~~ 145 (250)
++.++|++|+++|++++............. ........... ......+. .... ...+....... ...
T Consensus 89 ~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 166 (255)
T PLN02965 89 ALCKFTDKISMAIYVAAAMVKPGSIISPRL-KNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLED-YTL 166 (255)
T ss_pred HHHhCchheeEEEEEccccCCCCCCccHHH-HhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHH-HHH
Confidence 999999999999999986432211111111 10000000000 00000000 0000 00011100000 000
Q ss_pred ccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCc
Q 025629 146 NVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEP 225 (250)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 225 (250)
.. ............ ...+....+..+++|+++++|++|.++|++..+.+.+.+ +++++++++++||+++.|+|
T Consensus 167 ~~-~~~~~~~~~~~~----~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~--~~a~~~~i~~~GH~~~~e~p 239 (255)
T PLN02965 167 SS-KLLRPAPVRAFQ----DLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW--PPAQTYVLEDSDHSAFFSVP 239 (255)
T ss_pred HH-HhcCCCCCcchh----hhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC--CcceEEEecCCCCchhhcCH
Confidence 00 000000000000 001122345578999999999999999999999999999 88999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhh
Q 025629 226 DDMIIRVFADIISWLDD 242 (250)
Q Consensus 226 ~~~~~~~~~~i~~fl~~ 242 (250)
++ +++.|.+|++.
T Consensus 240 ~~----v~~~l~~~~~~ 252 (255)
T PLN02965 240 TT----LFQYLLQAVSS 252 (255)
T ss_pred HH----HHHHHHHHHHH
Confidence 99 88888888765
No 7
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=8.1e-28 Score=176.64 Aligned_cols=223 Identities=14% Similarity=0.206 Sum_probs=138.6
Q ss_pred ccccccccchhhHHHhhHHhhhhhhhh------------------hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHH
Q 025629 16 GSWHHLDTEFSLWITLDLAFQQVFMAT------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKV 77 (250)
Q Consensus 16 g~~hg~~~~~~~~~~~~~~l~~~~~~~------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~ 77 (250)
--.||++.+...|..+++.|.+.++++ ..++++++..++++++.++++++||||||.+++.+
T Consensus 31 vllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~ 110 (295)
T PRK03592 31 VFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDW 110 (295)
T ss_pred EEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHH
Confidence 346999999999999999999888877 55667788889999999999999999999999999
Q ss_pred HhhCCCceeeEEEeccccccCCCC-CCHHHHHHHHHHHhhhc-CCCcccCcchhhhhhhccc----chhhhhhccccccc
Q 025629 78 HLKQPNAWSGAILVAPMCKIADDM-VPPFLVKQILIGIANIL-PKHKLVPQKDLAEAAFRDL----KNRELTKYNVIVYK 151 (250)
Q Consensus 78 a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 151 (250)
+.++|++|+++|++++........ ..... ......+.... ...............+... ............+.
T Consensus 111 a~~~p~~v~~lil~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (295)
T PRK03592 111 AARHPDRVRGIAFMEAIVRPMTWDDFPPAV-RELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFP 189 (295)
T ss_pred HHhChhheeEEEEECCCCCCcchhhcchhH-HHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcC
Confidence 999999999999999854321100 11111 11111111100 0000000000000010000 00000000000000
Q ss_pred CchhhHHHH-------------HHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHH-HHhCCCCcEEEEeCCCC
Q 025629 152 DKPRLRTAL-------------ELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALY-EKASSKDKKCILYKDAF 217 (250)
Q Consensus 152 ~~~~~~~~~-------------~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 217 (250)
......... .......+....+.++++|+|+|+|++|.++++....++. +.+ +++++++++++|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~g 267 (295)
T PRK03592 190 TPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWP--NQLEITVFGAGL 267 (295)
T ss_pred CchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhh--hhcceeeccCcc
Confidence 000000000 0001112334567889999999999999999555554544 445 789999999999
Q ss_pred cccccCCchHHHHHHHHHHHHHHhhcCC
Q 025629 218 HSLLEGEPDDMIIRVFADIISWLDDHSR 245 (250)
Q Consensus 218 H~~~~~~~~~~~~~~~~~i~~fl~~~~~ 245 (250)
|+++.|+|++ +++.|.+|+++...
T Consensus 268 H~~~~e~p~~----v~~~i~~fl~~~~~ 291 (295)
T PRK03592 268 HFAQEDSPEE----IGAAIAAWLRRLRL 291 (295)
T ss_pred hhhhhcCHHH----HHHHHHHHHHHhcc
Confidence 9999999998 99999999987643
No 8
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.96 E-value=4.5e-28 Score=174.53 Aligned_cols=217 Identities=19% Similarity=0.231 Sum_probs=135.5
Q ss_pred ccccccccchhhHHHhhHHhhhhhhhhhhchHhHH-------------HHhhccCCCCcEEEEEeccchHHHHHHHhhCC
Q 025629 16 GSWHHLDTEFSLWITLDLAFQQVFMATFPALTGWL-------------MMSSSIIPTSKVFLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 16 g~~hg~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~-------------~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 82 (250)
--.||++.+...|..+++.|.+.|+++..|+.+.+ .+.+.++..++++++||||||.+++.+|.++|
T Consensus 17 vllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p 96 (256)
T PRK10349 17 VLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHP 96 (256)
T ss_pred EEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHhCh
Confidence 35799999999999999999999999855555433 12223456789999999999999999999999
Q ss_pred CceeeEEEeccccccCCCCC-C---HHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccc-hhhhhh---cccc-cccCc
Q 025629 83 NAWSGAILVAPMCKIADDMV-P---PFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLK-NRELTK---YNVI-VYKDK 153 (250)
Q Consensus 83 ~~v~~lvl~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~-~~~~~ 153 (250)
++|+++|++++......... + ..........+..... ......+....+.... ...... .... .....
T Consensus 97 ~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (256)
T PRK10349 97 ERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQ---RTVERFLALQTMGTETARQDARALKKTVLALPMPEV 173 (256)
T ss_pred HhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchH---HHHHHHHHHHHccCchHHHHHHHHHHHhhccCCCcH
Confidence 99999999987543221110 0 0111111111100000 0000000000000000 000000 0000 00000
Q ss_pred hhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHH
Q 025629 154 PRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVF 233 (250)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 233 (250)
.........+.. .+..+.+.++++|+|+++|++|.++|.+.++.+.+.+ +++++++++++||++++|+|++ ++
T Consensus 174 ~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i--~~~~~~~i~~~gH~~~~e~p~~----f~ 246 (256)
T PRK10349 174 DVLNGGLEILKT-VDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW--PHSESYIFAKAAHAPFISHPAE----FC 246 (256)
T ss_pred HHHHHHHHHHHh-CccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhC--CCCeEEEeCCCCCCccccCHHH----HH
Confidence 111111122222 2455678899999999999999999999998888988 8999999999999999999999 88
Q ss_pred HHHHHHHhh
Q 025629 234 ADIISWLDD 242 (250)
Q Consensus 234 ~~i~~fl~~ 242 (250)
+.+.+|-.+
T Consensus 247 ~~l~~~~~~ 255 (256)
T PRK10349 247 HLLVALKQR 255 (256)
T ss_pred HHHHHHhcc
Confidence 888887543
No 9
>PHA02857 monoglyceride lipase; Provisional
Probab=99.95 E-value=2.5e-26 Score=167.28 Aligned_cols=218 Identities=21% Similarity=0.358 Sum_probs=133.9
Q ss_pred ccccccchhhHHHhhHHhhhh-hhhhhhch----------------H---hHHHHhhc----cCCCCcEEEEEeccchHH
Q 025629 18 WHHLDTEFSLWITLDLAFQQV-FMATFPAL----------------T---GWLMMSSS----IIPTSKVFLFGQSLGGAV 73 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~~-~~~~~~d~----------------~---~~~~~~~~----~~~~~~~~lvGhS~Gg~~ 73 (250)
.||++.+...|..+++.|.+. |+++..|+ . +++...++ ..+..+++|+||||||.+
T Consensus 31 lHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~i 110 (276)
T PHA02857 31 SHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATI 110 (276)
T ss_pred eCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHH
Confidence 399999999999999999764 77762222 2 22222222 234568999999999999
Q ss_pred HHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhh-hcCCCcccCcchhhhhhhcccchhhhhhcccccccC
Q 025629 74 ALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIAN-ILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKD 152 (250)
Q Consensus 74 a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (250)
++.+|.++|++++++|+++|...... ... .......... ..+.... ...........................
T Consensus 111 a~~~a~~~p~~i~~lil~~p~~~~~~--~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (276)
T PHA02857 111 SILAAYKNPNLFTAMILMSPLVNAEA--VPR--LNLLAAKLMGIFYPNKIV--GKLCPESVSRDMDEVYKYQYDPLVNHE 184 (276)
T ss_pred HHHHHHhCccccceEEEecccccccc--ccH--HHHHHHHHHHHhCCCCcc--CCCCHhhccCCHHHHHHHhcCCCccCC
Confidence 99999999999999999999754221 111 1111111111 1111100 000000000000000000011001011
Q ss_pred chhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHH
Q 025629 153 KPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRV 232 (250)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 232 (250)
...............+....+.++++|+|+++|++|.++|++.+..+.+.+. +++++++++++||.++.|.++ .++++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~-~~~~~~~~~~~gH~~~~e~~~-~~~~~ 262 (276)
T PHA02857 185 KIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHAN-CNREIKIYEGAKHHLHKETDE-VKKSV 262 (276)
T ss_pred CccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHcc-CCceEEEeCCCcccccCCchh-HHHHH
Confidence 1111112222222334556788999999999999999999999999999874 478999999999999998773 34679
Q ss_pred HHHHHHHHhhc
Q 025629 233 FADIISWLDDH 243 (250)
Q Consensus 233 ~~~i~~fl~~~ 243 (250)
.+.+.+||+++
T Consensus 263 ~~~~~~~l~~~ 273 (276)
T PHA02857 263 MKEIETWIFNR 273 (276)
T ss_pred HHHHHHHHHHh
Confidence 99999999986
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.95 E-value=3.1e-27 Score=173.96 Aligned_cols=215 Identities=13% Similarity=0.117 Sum_probs=133.7
Q ss_pred cccccccchhhHHHhhHHhhh-hhhhh--------------------hhchHhHHHHhhccCCCCcEEEEEeccchHHHH
Q 025629 17 SWHHLDTEFSLWITLDLAFQQ-VFMAT--------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVAL 75 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~-~~~~~--------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~ 75 (250)
-.||++.+...|..+++.|.+ .|+++ +.++++++.+++++++.++++++||||||.+++
T Consensus 51 liHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~ 130 (302)
T PRK00870 51 LLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGL 130 (302)
T ss_pred EECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHH
Confidence 479999999999999999985 48887 356677788889999999999999999999999
Q ss_pred HHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHh--------hhcCCCcc-cCcchhhhhhhcccchhhhhhcc
Q 025629 76 KVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIA--------NILPKHKL-VPQKDLAEAAFRDLKNRELTKYN 146 (250)
Q Consensus 76 ~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 146 (250)
.+|.++|++|+++|++++............ ......... ........ ......... +............
T Consensus 131 ~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 208 (302)
T PRK00870 131 RLAAEHPDRFARLVVANTGLPTGDGPMPDA-FWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAA-YDAPFPDESYKAG 208 (302)
T ss_pred HHHHhChhheeEEEEeCCCCCCccccchHH-HhhhhcccccCchhhHHHHhhccccccCCHHHHHH-hhcccCChhhhcc
Confidence 999999999999999997532211100110 100000000 00000000 000000000 0000000000000
Q ss_pred cccc---cCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcE---EEEeCCCCccc
Q 025629 147 VIVY---KDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKK---CILYKDAFHSL 220 (250)
Q Consensus 147 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~ 220 (250)
.... ....... ............+.++++|+++|+|++|.++|.+. +.+.+.+ ++++ +.+++++||++
T Consensus 209 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~--~~~~~~~~~~i~~~gH~~ 282 (302)
T PRK00870 209 ARAFPLLVPTSPDD---PAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRI--PGAAGQPHPTIKGAGHFL 282 (302)
T ss_pred hhhhhhcCCCCCCC---cchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhc--ccccccceeeecCCCccc
Confidence 0000 0000000 00001112335678899999999999999999766 7788888 5554 88999999999
Q ss_pred ccCCchHHHHHHHHHHHHHHhhc
Q 025629 221 LEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 221 ~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
++|+|++ +++.|.+|++++
T Consensus 283 ~~e~p~~----~~~~l~~fl~~~ 301 (302)
T PRK00870 283 QEDSGEE----LAEAVLEFIRAT 301 (302)
T ss_pred hhhChHH----HHHHHHHHHhcC
Confidence 9999998 999999999764
No 11
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=3.9e-27 Score=176.63 Aligned_cols=222 Identities=15% Similarity=0.213 Sum_probs=136.3
Q ss_pred ccccccccchhhHHHhhHHhhhhhhhh-------------------hhchHhHHHHhhccCCCCcEEEEEeccchHHHHH
Q 025629 16 GSWHHLDTEFSLWITLDLAFQQVFMAT-------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALK 76 (250)
Q Consensus 16 g~~hg~~~~~~~~~~~~~~l~~~~~~~-------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~ 76 (250)
--.||++.+...|..+++.|.+.|+++ ++++++++.+++++++.++++|+||||||.+++.
T Consensus 92 vllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~ 171 (360)
T PLN02679 92 LLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVI 171 (360)
T ss_pred EEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHH
Confidence 347999999999999999998888887 3566777788899888999999999999999999
Q ss_pred HHh-hCCCceeeEEEeccccccCCCCC-CHHHHHHH---HHHHhhhcCCCcc--------cCcchhh---hhhhcccc--
Q 025629 77 VHL-KQPNAWSGAILVAPMCKIADDMV-PPFLVKQI---LIGIANILPKHKL--------VPQKDLA---EAAFRDLK-- 138 (250)
Q Consensus 77 ~a~-~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~-- 138 (250)
++. .+|++|+++|++++......... ........ ...+......... .....+. ...+....
T Consensus 172 ~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (360)
T PLN02679 172 AASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAV 251 (360)
T ss_pred HHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccC
Confidence 887 47999999999998653221110 00000000 0000000000000 0000000 00000000
Q ss_pred hhhhhhcccccccCchhhHHHHHHHHh--hHHHHHhccCCCCCEEEEeeCCCcccChHH-----HHHHHHHhCCCCcEEE
Q 025629 139 NRELTKYNVIVYKDKPRLRTALELLKT--TEGIERRLEKVSLPLLILHGENDTVTDPSV-----SKALYEKASSKDKKCI 211 (250)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~-----~~~~~~~~~~~~~~~~ 211 (250)
........................... ..+....+.++++|+|+|+|++|.++|++. ...+.+.+ ++++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~i--p~~~l~ 329 (360)
T PLN02679 252 DDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQL--PNVTLY 329 (360)
T ss_pred CHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccC--CceEEE
Confidence 000000000000111111122222111 112345677899999999999999998763 23455556 789999
Q ss_pred EeCCCCcccccCCchHHHHHHHHHHHHHHhhc
Q 025629 212 LYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 212 ~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
+++++||+++.|+|++ +++.|.+||++.
T Consensus 330 ~i~~aGH~~~~E~Pe~----~~~~I~~FL~~~ 357 (360)
T PLN02679 330 VLEGVGHCPHDDRPDL----VHEKLLPWLAQL 357 (360)
T ss_pred EcCCCCCCccccCHHH----HHHHHHHHHHhc
Confidence 9999999999999998 999999999763
No 12
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.95 E-value=9.7e-27 Score=167.70 Aligned_cols=214 Identities=14% Similarity=0.160 Sum_probs=138.5
Q ss_pred cccccccchhhHHHhhHHhhhhhhhh-----------------hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHh
Q 025629 17 SWHHLDTEFSLWITLDLAFQQVFMAT-----------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~~~~~~-----------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
-.||++++...|..+...|.++|+++ ++++++++.++++.++.++++|+||||||.+++.+|.
T Consensus 21 ~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~ 100 (255)
T PRK10673 21 LVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTA 100 (255)
T ss_pred EECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHH
Confidence 36999999999999999999888887 5677888899999999899999999999999999999
Q ss_pred hCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhccc-chhhhhhcccccccCc---hh
Q 025629 80 KQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDL-KNRELTKYNVIVYKDK---PR 155 (250)
Q Consensus 80 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~ 155 (250)
++|++|+++|++++....... .. .......+...... .. .........+... ............+... ..
T Consensus 101 ~~~~~v~~lvli~~~~~~~~~---~~-~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (255)
T PRK10673 101 LAPDRIDKLVAIDIAPVDYHV---RR-HDEIFAAINAVSEA-GA-TTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFN 174 (255)
T ss_pred hCHhhcceEEEEecCCCCccc---hh-hHHHHHHHHHhhhc-cc-ccHHHHHHHHHHhcCCHHHHHHHHhcCCcceeEee
Confidence 999999999999754322110 00 00111111110000 00 0000000000000 0000000000000000 00
Q ss_pred hHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHH
Q 025629 156 LRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFAD 235 (250)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~ 235 (250)
.......+... ...+.+.++++|+|+|+|++|..++++..+.+.+.+ +++++.+++++||+++.++|++ +++.
T Consensus 175 ~~~~~~~~~~~-~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~----~~~~ 247 (255)
T PRK10673 175 VPVLWDQYPHI-VGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF--PQARAHVIAGAGHWVHAEKPDA----VLRA 247 (255)
T ss_pred HHHHHHhHHHH-hCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC--CCcEEEEeCCCCCeeeccCHHH----HHHH
Confidence 00011111110 112346678999999999999999999999999988 8999999999999999999998 9999
Q ss_pred HHHHHhhc
Q 025629 236 IISWLDDH 243 (250)
Q Consensus 236 i~~fl~~~ 243 (250)
|.+||.++
T Consensus 248 l~~fl~~~ 255 (255)
T PRK10673 248 IRRYLNDK 255 (255)
T ss_pred HHHHHhcC
Confidence 99999753
No 13
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.95 E-value=8.7e-27 Score=169.83 Aligned_cols=213 Identities=15% Similarity=0.163 Sum_probs=130.3
Q ss_pred cccccccchhhHHHhhHHhhhhhhhh-------------------hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHH
Q 025629 17 SWHHLDTEFSLWITLDLAFQQVFMAT-------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKV 77 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~~~~~~-------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~ 77 (250)
-.||++.+...|..+.+.|.+.|+++ ..++++++..++++++.++++++||||||.+++.+
T Consensus 39 ~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~ 118 (286)
T PRK03204 39 LCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAV 118 (286)
T ss_pred EECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHH
Confidence 46999999899999999998888887 35667777888888998999999999999999999
Q ss_pred HhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcc----cchhhhhhcccccccCc
Q 025629 78 HLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRD----LKNRELTKYNVIVYKDK 153 (250)
Q Consensus 78 a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 153 (250)
+..+|++|+++|++++....... ....... ......................+.. ............. ...
T Consensus 119 a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 193 (286)
T PRK03204 119 AVERADRVRGVVLGNTWFWPADT-LAMKAFS---RVMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAV-QPN 193 (286)
T ss_pred HHhChhheeEEEEECccccCCCc-hhHHHHH---HHhccccchhhhhhhhHHHHHhccccccCCCCHHHHHHhcCC-CCC
Confidence 99999999999998875422111 0000000 0000000000000000000111100 0000000000000 000
Q ss_pred hhhHHHHH----HHHh----hHHHHHhccC--CCCCEEEEeeCCCcccChH-HHHHHHHHhCCCCcEEEEeCCCCccccc
Q 025629 154 PRLRTALE----LLKT----TEGIERRLEK--VSLPLLILHGENDTVTDPS-VSKALYEKASSKDKKCILYKDAFHSLLE 222 (250)
Q Consensus 154 ~~~~~~~~----~~~~----~~~~~~~~~~--i~~Pvl~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 222 (250)
+....... .+.. ..+....+.+ +++|+++|+|++|.++++. ..+.+.+.+ ++.++++++++||++++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~i--p~~~~~~i~~aGH~~~~ 271 (286)
T PRK03204 194 AAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATF--PDHVLVELPNAKHFIQE 271 (286)
T ss_pred HHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhc--CCCeEEEcCCCcccccc
Confidence 01111000 0000 0111111222 2899999999999988655 567888888 88999999999999999
Q ss_pred CCchHHHHHHHHHHHHHH
Q 025629 223 GEPDDMIIRVFADIISWL 240 (250)
Q Consensus 223 ~~~~~~~~~~~~~i~~fl 240 (250)
|+|++ +++.|.+||
T Consensus 272 e~Pe~----~~~~i~~~~ 285 (286)
T PRK03204 272 DAPDR----IAAAIIERF 285 (286)
T ss_pred cCHHH----HHHHHHHhc
Confidence 99998 899999997
No 14
>PLN02578 hydrolase
Probab=99.94 E-value=5.5e-26 Score=170.31 Aligned_cols=219 Identities=17% Similarity=0.204 Sum_probs=137.8
Q ss_pred ccccccccchhhHHHhhHHhhhhhhhh------------------hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHH
Q 025629 16 GSWHHLDTEFSLWITLDLAFQQVFMAT------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKV 77 (250)
Q Consensus 16 g~~hg~~~~~~~~~~~~~~l~~~~~~~------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~ 77 (250)
--.||++.+...|..+.+.|.+.|+++ ..++.+++.++++++..++++++||||||.+++.+
T Consensus 90 vliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~ 169 (354)
T PLN02578 90 VLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALST 169 (354)
T ss_pred EEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHH
Confidence 346999999999999999999888887 34455677788888888899999999999999999
Q ss_pred HhhCCCceeeEEEeccccccCCCCCC---------HHH----HHHHHHHHhhhcCCC---cccCcchh---hhhhhcccc
Q 025629 78 HLKQPNAWSGAILVAPMCKIADDMVP---------PFL----VKQILIGIANILPKH---KLVPQKDL---AEAAFRDLK 138 (250)
Q Consensus 78 a~~~p~~v~~lvl~~~~~~~~~~~~~---------~~~----~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~ 138 (250)
|.++|++|+++|++++.......... ... ............... ........ ....+.+..
T Consensus 170 A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (354)
T PLN02578 170 AVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKS 249 (354)
T ss_pred HHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcc
Confidence 99999999999999876532211100 000 000000000000000 00000000 000011000
Q ss_pred h-hhh-hhcccccccCchhhHHHHHHHHh------hHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEE
Q 025629 139 N-REL-TKYNVIVYKDKPRLRTALELLKT------TEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKC 210 (250)
Q Consensus 139 ~-~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (250)
. .+. ....................+.. ..+..+.+.++++|+++|+|++|.++|.+.++.+.+.+ ++.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~--p~a~l 327 (354)
T PLN02578 250 NVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY--PDTTL 327 (354)
T ss_pred cCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCEE
Confidence 0 000 00000000011111111111111 11234667889999999999999999999999999988 88899
Q ss_pred EEeCCCCcccccCCchHHHHHHHHHHHHHHh
Q 025629 211 ILYKDAFHSLLEGEPDDMIIRVFADIISWLD 241 (250)
Q Consensus 211 ~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 241 (250)
+++ ++||+++.|+|++ +++.|.+|++
T Consensus 328 ~~i-~~GH~~~~e~p~~----~~~~I~~fl~ 353 (354)
T PLN02578 328 VNL-QAGHCPHDEVPEQ----VNKALLEWLS 353 (354)
T ss_pred EEe-CCCCCccccCHHH----HHHHHHHHHh
Confidence 999 5999999999999 9999999985
No 15
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.94 E-value=2e-25 Score=169.88 Aligned_cols=215 Identities=13% Similarity=0.163 Sum_probs=130.6
Q ss_pred cccccccchhhHHH-hhHHhh----hhhhhh-------------------hhchHhHH-HHhhccCCCCcEEEEEeccch
Q 025629 17 SWHHLDTEFSLWIT-LDLAFQ----QVFMAT-------------------FPALTGWL-MMSSSIIPTSKVFLFGQSLGG 71 (250)
Q Consensus 17 ~~hg~~~~~~~~~~-~~~~l~----~~~~~~-------------------~~d~~~~~-~~~~~~~~~~~~~lvGhS~Gg 71 (250)
-.||++.+...|.. +.+.|. ..|+++ +.++++++ ..++++++.++++++||||||
T Consensus 206 LlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG 285 (481)
T PLN03087 206 FIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERYKVKSFHIVAHSLGC 285 (481)
T ss_pred EECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHH
Confidence 36999999999985 446665 357777 33445555 367888899999999999999
Q ss_pred HHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHH--hhhcCCCcccCcchhhhhhhc---c---------c
Q 025629 72 AVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGI--ANILPKHKLVPQKDLAEAAFR---D---------L 137 (250)
Q Consensus 72 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~---------~ 137 (250)
.+++.+|.++|++|+++|+++++........ .......... ....+.... ......++. . .
T Consensus 286 ~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~w~~~~~~~~~~~~~~~~ 360 (481)
T PLN03087 286 ILALALAVKHPGAVKSLTLLAPPYYPVPKGV--QATQYVMRKVAPRRVWPPIAF---GASVACWYEHISRTICLVICKNH 360 (481)
T ss_pred HHHHHHHHhChHhccEEEEECCCccccccch--hHHHHHHHHhcccccCCcccc---chhHHHHHHHHHhhhhcccccch
Confidence 9999999999999999999998654322111 0011111000 000000000 000000000 0 0
Q ss_pred chhhh----------hhccccc---ccCchhhHHHHHHHHh-----hHHHHHhccCCCCCEEEEeeCCCcccChHHHHHH
Q 025629 138 KNREL----------TKYNVIV---YKDKPRLRTALELLKT-----TEGIERRLEKVSLPLLILHGENDTVTDPSVSKAL 199 (250)
Q Consensus 138 ~~~~~----------~~~~~~~---~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~ 199 (250)
..... ....... ................ .........+|++|+|+++|++|.++|++..+.+
T Consensus 361 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~l 440 (481)
T PLN03087 361 RLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAV 440 (481)
T ss_pred HHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHH
Confidence 00000 0000000 0000000111111100 0111223347899999999999999999999999
Q ss_pred HHHhCCCCcEEEEeCCCCccccc-CCchHHHHHHHHHHHHHHhh
Q 025629 200 YEKASSKDKKCILYKDAFHSLLE-GEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~i~~fl~~ 242 (250)
.+.+ |++++++++++||.+++ ++|++ +++.|.+|...
T Consensus 441 a~~i--P~a~l~vI~~aGH~~~v~e~p~~----fa~~L~~F~~~ 478 (481)
T PLN03087 441 KAKV--PRARVKVIDDKDHITIVVGRQKE----FARELEEIWRR 478 (481)
T ss_pred HHhC--CCCEEEEeCCCCCcchhhcCHHH----HHHHHHHHhhc
Confidence 9999 89999999999999885 89988 89999999865
No 16
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.94 E-value=5.6e-26 Score=163.94 Aligned_cols=215 Identities=13% Similarity=0.168 Sum_probs=137.4
Q ss_pred ccccccchhhHHHhhHHhhhhhhhh-------------------hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHH
Q 025629 18 WHHLDTEFSLWITLDLAFQQVFMAT-------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVH 78 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~~~~~~-------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a 78 (250)
.||++.+...|...+..+.++|+++ +.+++.++.++++.++.++++++||||||.+++.++
T Consensus 19 lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a 98 (257)
T TIGR03611 19 SSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLA 98 (257)
T ss_pred EcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHH
Confidence 6999999999999999888888777 455667788888888889999999999999999999
Q ss_pred hhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcc--cCcchhhhhhhcccch--hhhhhcccccccCch
Q 025629 79 LKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKL--VPQKDLAEAAFRDLKN--RELTKYNVIVYKDKP 154 (250)
Q Consensus 79 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 154 (250)
.++|++|+++|++++........ ..........+......... ................ ..........+....
T Consensus 99 ~~~~~~v~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (257)
T TIGR03611 99 LRYPERLLSLVLINAWSRPDPHT--RRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADEAHALAHFPGKA 176 (257)
T ss_pred HHChHHhHHheeecCCCCCChhH--HHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhhhhcccccCccH
Confidence 99999999999999765432110 00011111111110000000 0000000000000000 000000000001111
Q ss_pred hhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHH
Q 025629 155 RLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFA 234 (250)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 234 (250)
........... .+....+.++++|+++++|++|.++|++.++.+.+.+ ++.+++.++++||.+++++|++ +.+
T Consensus 177 ~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~----~~~ 249 (257)
T TIGR03611 177 NVLRRINALEA-FDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAAL--PNAQLKLLPYGGHASNVTDPET----FNR 249 (257)
T ss_pred HHHHHHHHHHc-CCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhc--CCceEEEECCCCCCccccCHHH----HHH
Confidence 11111111111 1334567788999999999999999999999999988 7889999999999999999998 899
Q ss_pred HHHHHHh
Q 025629 235 DIISWLD 241 (250)
Q Consensus 235 ~i~~fl~ 241 (250)
.|.+||+
T Consensus 250 ~i~~fl~ 256 (257)
T TIGR03611 250 ALLDFLK 256 (257)
T ss_pred HHHHHhc
Confidence 9999986
No 17
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.94 E-value=7e-26 Score=162.18 Aligned_cols=213 Identities=19% Similarity=0.219 Sum_probs=130.3
Q ss_pred cccccccchhhHHHhhHHhhhhhhhhhhchHhHH--------------HHhhccCCCCcEEEEEeccchHHHHHHHhhCC
Q 025629 17 SWHHLDTEFSLWITLDLAFQQVFMATFPALTGWL--------------MMSSSIIPTSKVFLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~--------------~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 82 (250)
-.||++.+...|..+.+.|...++++..|+.+.+ ..+.+. ..++++++||||||.+++.+|.++|
T Consensus 9 ~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~-~~~~~~lvG~S~Gg~~a~~~a~~~p 87 (245)
T TIGR01738 9 LIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQ-APDPAIWLGWSLGGLVALHIAATHP 87 (245)
T ss_pred EEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCCCcCHHHHHHHHHHh-CCCCeEEEEEcHHHHHHHHHHHHCH
Confidence 4699999999999999999888888844433322 222222 2368999999999999999999999
Q ss_pred CceeeEEEeccccccCCC--CC---CHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhh---hhcccccccC--
Q 025629 83 NAWSGAILVAPMCKIADD--MV---PPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNREL---TKYNVIVYKD-- 152 (250)
Q Consensus 83 ~~v~~lvl~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-- 152 (250)
++++++|++++....... .. .......+...+..... ...........+........ ..........
T Consensus 88 ~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (245)
T TIGR01738 88 DRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQ---RTIERFLALQTLGTPTARQDARALKQTLLARPTPN 164 (245)
T ss_pred HhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHH---HHHHHHHHHHHhcCCccchHHHHHHHHhhccCCCC
Confidence 999999999876543211 11 11111111111100000 00000000000000000000 0000000000
Q ss_pred chhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHH
Q 025629 153 KPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRV 232 (250)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 232 (250)
..........+.. .+....+.++++|+++++|++|.++|++..+.+.+.+ +++++++++++||++++++|++ +
T Consensus 165 ~~~~~~~~~~~~~-~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~----~ 237 (245)
T TIGR01738 165 VQVLQAGLEILAT-VDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA--PHSELYIFAKAAHAPFLSHAEA----F 237 (245)
T ss_pred HHHHHHHHHHhhc-ccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC--CCCeEEEeCCCCCCccccCHHH----H
Confidence 0111111222211 1344667899999999999999999999998888888 8899999999999999999998 8
Q ss_pred HHHHHHHH
Q 025629 233 FADIISWL 240 (250)
Q Consensus 233 ~~~i~~fl 240 (250)
++.|.+|+
T Consensus 238 ~~~i~~fi 245 (245)
T TIGR01738 238 CALLVAFK 245 (245)
T ss_pred HHHHHhhC
Confidence 99998885
No 18
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.94 E-value=3.1e-25 Score=161.92 Aligned_cols=217 Identities=18% Similarity=0.245 Sum_probs=136.8
Q ss_pred cccccccchhhHHHhhHHhhhhhhhh-------------------hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHH
Q 025629 17 SWHHLDTEFSLWITLDLAFQQVFMAT-------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKV 77 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~~~~~~-------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~ 77 (250)
-.||++.+...|..+.+.|.+.|+++ ++++++++.+++++++.++++|+||||||.+++.+
T Consensus 33 ~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~ 112 (278)
T TIGR03056 33 LLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRL 112 (278)
T ss_pred EEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHH
Confidence 47999999999999999998887776 45667778888888888899999999999999999
Q ss_pred HhhCCCceeeEEEeccccccCCCCC---CHHHHHHHHH--HHhhhcCCCcccCcchhhhhhhcccc---hhhhhhccccc
Q 025629 78 HLKQPNAWSGAILVAPMCKIADDMV---PPFLVKQILI--GIANILPKHKLVPQKDLAEAAFRDLK---NRELTKYNVIV 149 (250)
Q Consensus 78 a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 149 (250)
|.++|++++++|++++......... .+........ ......... ............... ...........
T Consensus 113 a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (278)
T TIGR03056 113 ALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRG--AADQQRVERLIRDTGSLLDKAGMTYYGRL 190 (278)
T ss_pred HHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhh--cccCcchhHHhhccccccccchhhHHHHh
Confidence 9999999999999987643221110 0000000000 000000000 000000000000000 00000000000
Q ss_pred ccCchhhHHHHHHHHh--hHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchH
Q 025629 150 YKDKPRLRTALELLKT--TEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDD 227 (250)
Q Consensus 150 ~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 227 (250)
................ .......++++++|+++++|++|.++|++..+.+.+.+ +++++++++++||+++.+.|++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~ 268 (278)
T TIGR03056 191 IRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRV--PTATLHVVPGGGHLVHEEQADG 268 (278)
T ss_pred hcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhc--cCCeEEEECCCCCcccccCHHH
Confidence 0000001111111111 01223457788999999999999999999999998888 8899999999999999999998
Q ss_pred HHHHHHHHHHHHHh
Q 025629 228 MIIRVFADIISWLD 241 (250)
Q Consensus 228 ~~~~~~~~i~~fl~ 241 (250)
+++.|.+|++
T Consensus 269 ----~~~~i~~f~~ 278 (278)
T TIGR03056 269 ----VVGLILQAAE 278 (278)
T ss_pred ----HHHHHHHHhC
Confidence 9999999974
No 19
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.94 E-value=1.5e-25 Score=163.83 Aligned_cols=215 Identities=17% Similarity=0.144 Sum_probs=130.3
Q ss_pred cccccccchhhHHHh---hHHh-hhhhhhhhh-------------------chHhHHHHhhccCCCCcEEEEEeccchHH
Q 025629 17 SWHHLDTEFSLWITL---DLAF-QQVFMATFP-------------------ALTGWLMMSSSIIPTSKVFLFGQSLGGAV 73 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~---~~~l-~~~~~~~~~-------------------d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~ 73 (250)
-.||++.+...|... +..+ ...|+++.. .+++++.++++.++.++++++||||||.+
T Consensus 35 llHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~i 114 (282)
T TIGR03343 35 MLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIEKAHLVGNSMGGAT 114 (282)
T ss_pred EECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCCCCeeEEEECchHHH
Confidence 369998877777542 3344 345777711 24677888899999999999999999999
Q ss_pred HHHHHhhCCCceeeEEEeccccccCCCC--CCHHHHHHHHHHHhhhcCCCcccCcchhhhhh-hcccc-hhhhhhcccc-
Q 025629 74 ALKVHLKQPNAWSGAILVAPMCKIADDM--VPPFLVKQILIGIANILPKHKLVPQKDLAEAA-FRDLK-NRELTKYNVI- 148 (250)
Q Consensus 74 a~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~- 148 (250)
++.+|.++|++|+++|++++........ .+..........+ ............... +.... ..........
T Consensus 115 a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (282)
T TIGR03343 115 ALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLY----AEPSYETLKQMLNVFLFDQSLITEELLQGRWEN 190 (282)
T ss_pred HHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHh----cCCCHHHHHHHHhhCccCcccCcHHHHHhHHHH
Confidence 9999999999999999999764211100 1111111111110 000000000000000 00000 0000000000
Q ss_pred cccCchhhHHHHHHH----HhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCC
Q 025629 149 VYKDKPRLRTALELL----KTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGE 224 (250)
Q Consensus 149 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 224 (250)
............... ....+....++++++|+|+++|++|.+++++.++.+.+.+ +++++++++++||+++.|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~--~~~~~~~i~~agH~~~~e~ 268 (282)
T TIGR03343 191 IQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNM--PDAQLHVFSRCGHWAQWEH 268 (282)
T ss_pred hhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhC--CCCEEEEeCCCCcCCcccC
Confidence 000000000000000 0011234567889999999999999999999999999998 8999999999999999999
Q ss_pred chHHHHHHHHHHHHHHh
Q 025629 225 PDDMIIRVFADIISWLD 241 (250)
Q Consensus 225 ~~~~~~~~~~~i~~fl~ 241 (250)
|+. +.+.|.+|++
T Consensus 269 p~~----~~~~i~~fl~ 281 (282)
T TIGR03343 269 ADA----FNRLVIDFLR 281 (282)
T ss_pred HHH----HHHHHHHHhh
Confidence 998 8999999986
No 20
>PRK10749 lysophospholipase L2; Provisional
Probab=99.94 E-value=1.2e-24 Score=161.78 Aligned_cols=224 Identities=17% Similarity=0.223 Sum_probs=132.7
Q ss_pred ccccccchhhHHHhhHHhh-hhhhhh------------------------hhchHhHHHHhhccC----CCCcEEEEEec
Q 025629 18 WHHLDTEFSLWITLDLAFQ-QVFMAT------------------------FPALTGWLMMSSSII----PTSKVFLFGQS 68 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~-~~~~~~------------------------~~d~~~~~~~~~~~~----~~~~~~lvGhS 68 (250)
.||++.+...|..+...+. ..|+++ +.++++++..+++.+ +..+++++|||
T Consensus 60 ~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhS 139 (330)
T PRK10749 60 CPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHS 139 (330)
T ss_pred ECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEc
Confidence 5777777766766665554 335555 234455566565554 66799999999
Q ss_pred cchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhh---cCCCcc-----cCcchhhhhhhcccch-
Q 025629 69 LGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANI---LPKHKL-----VPQKDLAEAAFRDLKN- 139 (250)
Q Consensus 69 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~~~- 139 (250)
|||.+++.++.++|++++++|+++|........ +.............. ...... .+..............
T Consensus 140 mGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 218 (330)
T PRK10749 140 MGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL-PSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERY 218 (330)
T ss_pred HHHHHHHHHHHhCCCCcceEEEECchhccCCCC-CcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHH
Confidence 999999999999999999999999876543222 111112221111111 000000 0000000000000000
Q ss_pred hhhhh-ccccc-c-cCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhC-----CCCcEEE
Q 025629 140 RELTK-YNVIV-Y-KDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKAS-----SKDKKCI 211 (250)
Q Consensus 140 ~~~~~-~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~ 211 (250)
..... ..... . ............+.........+.++++|+|+|+|++|.+++++.++.+.+.++ .++++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~ 298 (330)
T PRK10749 219 RRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPL 298 (330)
T ss_pred HHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEE
Confidence 00000 00000 0 001122222333333334456778899999999999999999999888888763 1456899
Q ss_pred EeCCCCcccccCCchHHHHHHHHHHHHHHhhc
Q 025629 212 LYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 212 ~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
+++++||.++.|.+.. ++++.+.|.+||+++
T Consensus 299 ~~~gagH~~~~E~~~~-r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 299 VIKGAYHEILFEKDAM-RSVALNAIVDFFNRH 329 (330)
T ss_pred EeCCCcchhhhCCcHH-HHHHHHHHHHHHhhc
Confidence 9999999999987742 356899999999875
No 21
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=1.9e-24 Score=162.51 Aligned_cols=221 Identities=27% Similarity=0.408 Sum_probs=135.5
Q ss_pred ccccccchhhHHHhhHHhhh-hhhhh-------------------hhchHhHHHHhhccC----CCCcEEEEEeccchHH
Q 025629 18 WHHLDTEFSLWITLDLAFQQ-VFMAT-------------------FPALTGWLMMSSSII----PTSKVFLFGQSLGGAV 73 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~-~~~~~-------------------~~d~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~ 73 (250)
.||++.+...|..+.+.|.+ .|+++ .+++.+++..+++.+ +..+++++||||||.+
T Consensus 142 lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~i 221 (395)
T PLN02652 142 IHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAV 221 (395)
T ss_pred ECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHH
Confidence 68988888888888888865 46666 223344555555443 3458999999999999
Q ss_pred HHHHHhhCC---CceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccc
Q 025629 74 ALKVHLKQP---NAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVY 150 (250)
Q Consensus 74 a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (250)
++.++. +| ++++++|+.+|....... ...............+................+.............+
T Consensus 222 al~~a~-~p~~~~~v~glVL~sP~l~~~~~---~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~ 297 (395)
T PLN02652 222 VLKAAS-YPSIEDKLEGIVLTSPALRVKPA---HPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVY 297 (395)
T ss_pred HHHHHh-ccCcccccceEEEECcccccccc---hHHHHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcc
Confidence 998764 55 479999999987653321 11111111222222222111110000000000000000000011111
Q ss_pred cCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccC-CchHHH
Q 025629 151 KDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEG-EPDDMI 229 (250)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~ 229 (250)
......................+.++++|+|+++|++|.++|++.++.+++.+.+++++++++++++|.++.+ .+++
T Consensus 298 ~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~-- 375 (395)
T PLN02652 298 TGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREE-- 375 (395)
T ss_pred cCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHH--
Confidence 1111222333333333345677889999999999999999999999999998765678999999999999886 4555
Q ss_pred HHHHHHHHHHHhhcCCC
Q 025629 230 IRVFADIISWLDDHSRS 246 (250)
Q Consensus 230 ~~~~~~i~~fl~~~~~~ 246 (250)
+.+.|.+||.++++.
T Consensus 376 --v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 376 --VGRDIIDWMEKRLDL 390 (395)
T ss_pred --HHHHHHHHHHHHhhc
Confidence 999999999988754
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.93 E-value=1.1e-25 Score=161.65 Aligned_cols=210 Identities=18% Similarity=0.250 Sum_probs=134.9
Q ss_pred ccccccchhhHHHhhHHhhhhhhhh------------------hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHh
Q 025629 18 WHHLDTEFSLWITLDLAFQQVFMAT------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~~~~~~------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
.||++.+...|..+++.|...|+++ ..++++++.++++.++.++++++||||||.+++.+|.
T Consensus 19 ~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~ 98 (251)
T TIGR02427 19 INSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAA 98 (251)
T ss_pred EcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHH
Confidence 6999999999999999998878777 4666777888888888889999999999999999999
Q ss_pred hCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcc----cchhhhhhcc-cccccCch
Q 025629 80 KQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRD----LKNRELTKYN-VIVYKDKP 154 (250)
Q Consensus 80 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~ 154 (250)
++|++|+++|++++........ ................ . ........+.. .......... ........
T Consensus 99 ~~p~~v~~li~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (251)
T TIGR02427 99 RRPDRVRALVLSNTAAKIGTPE---SWNARIAAVRAEGLAA---L-ADAVLERWFTPGFREAHPARLDLYRNMLVRQPPD 171 (251)
T ss_pred HCHHHhHHHhhccCccccCchh---hHHHHHhhhhhccHHH---H-HHHHHHHHcccccccCChHHHHHHHHHHHhcCHH
Confidence 9999999999998765422210 0000000000000000 0 00000000000 0000000000 00000000
Q ss_pred hhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHH
Q 025629 155 RLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFA 234 (250)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 234 (250)
........+. ..+....+.++++|+++++|++|.++|.+..+.+.+.+ ++.++++++++||..++++|++ +.+
T Consensus 172 ~~~~~~~~~~-~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~----~~~ 244 (251)
T TIGR02427 172 GYAGCCAAIR-DADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLV--PGARFAEIRGAGHIPCVEQPEA----FNA 244 (251)
T ss_pred HHHHHHHHHh-cccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhC--CCceEEEECCCCCcccccChHH----HHH
Confidence 0000111111 11334567788999999999999999999998898888 7889999999999999999988 889
Q ss_pred HHHHHHh
Q 025629 235 DIISWLD 241 (250)
Q Consensus 235 ~i~~fl~ 241 (250)
.|.+|+.
T Consensus 245 ~i~~fl~ 251 (251)
T TIGR02427 245 ALRDFLR 251 (251)
T ss_pred HHHHHhC
Confidence 9999874
No 23
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.93 E-value=8e-26 Score=165.33 Aligned_cols=221 Identities=19% Similarity=0.216 Sum_probs=137.5
Q ss_pred cccccccchhhHHHhhHHhhhh--hhhh--------------------hhchHhHHHHhhccCCCCcEEEEEeccchHHH
Q 025629 17 SWHHLDTEFSLWITLDLAFQQV--FMAT--------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVA 74 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~~--~~~~--------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a 74 (250)
-.||++.+...|+.+++.|.+. +++. ..+..+.+..+..+....+++++|||+||.+|
T Consensus 63 llHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va 142 (326)
T KOG1454|consen 63 LLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVA 142 (326)
T ss_pred EeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHH
Confidence 3699999999999999999988 6565 44555555667777778889999999999999
Q ss_pred HHHHhhCCCceeeEE---EeccccccCCCCCCHHHHHH---HHHHHhhhcCCCcccCcchhhhhhhcccch----hhhhh
Q 025629 75 LKVHLKQPNAWSGAI---LVAPMCKIADDMVPPFLVKQ---ILIGIANILPKHKLVPQKDLAEAAFRDLKN----RELTK 144 (250)
Q Consensus 75 ~~~a~~~p~~v~~lv---l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 144 (250)
..+|+.+|+.|+++| ++++........ ....... .........+.....+.............. .....
T Consensus 143 ~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (326)
T KOG1454|consen 143 LKAAAYYPETVDSLVLLDLLGPPVYSTPKG-IKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLL 221 (326)
T ss_pred HHHHHhCcccccceeeecccccccccCCcc-hhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccch
Confidence 999999999999999 555554332211 1111111 111111111111111111010000000000 00000
Q ss_pred cccccc-cC---chhhHH-HHHHHHh----hHHHHHhccCCC-CCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeC
Q 025629 145 YNVIVY-KD---KPRLRT-ALELLKT----TEGIERRLEKVS-LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYK 214 (250)
Q Consensus 145 ~~~~~~-~~---~~~~~~-~~~~~~~----~~~~~~~~~~i~-~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (250)
...... .. ....+. ...++.. .......+.++. +|+|+++|++|+++|.+.+..+.+.+ +++++++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~--pn~~~~~I~ 299 (326)
T KOG1454|consen 222 EKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKL--PNAELVEIP 299 (326)
T ss_pred hhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhC--CCceEEEeC
Confidence 000000 00 000000 0000000 012334566775 99999999999999999999999999 999999999
Q ss_pred CCCcccccCCchHHHHHHHHHHHHHHhhcC
Q 025629 215 DAFHSLLEGEPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 215 ~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 244 (250)
++||.++.|.|++ +++.|..|+.+..
T Consensus 300 ~~gH~~h~e~Pe~----~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 300 GAGHLPHLERPEE----VAALLRSFIARLR 325 (326)
T ss_pred CCCcccccCCHHH----HHHHHHHHHHHhc
Confidence 9999999999999 9999999998753
No 24
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.93 E-value=1.3e-24 Score=162.38 Aligned_cols=218 Identities=14% Similarity=0.076 Sum_probs=134.0
Q ss_pred cccccccchhhHHHhhHHhhhhhhhh----------------------hhchHhHHHHhhccCCCCcEEEEEeccchHHH
Q 025629 17 SWHHLDTEFSLWITLDLAFQQVFMAT----------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVA 74 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~~~~~~----------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a 74 (250)
-.||++.+...|..+++.|.+.|+++ +.++++++..++++++.++++|+|||+||.++
T Consensus 132 llHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia 211 (383)
T PLN03084 132 LIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPV 211 (383)
T ss_pred EECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHH
Confidence 36999999999999999999888887 24466777889999999999999999999999
Q ss_pred HHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHH-HHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCc
Q 025629 75 LKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILI-GIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDK 153 (250)
Q Consensus 75 ~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (250)
+.+|.++|++|+++|+++|.........+ .....+.. .....+......................+........+...
T Consensus 212 ~~~a~~~P~~v~~lILi~~~~~~~~~~~p-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 290 (383)
T PLN03084 212 VKYASAHPDKIKKLILLNPPLTKEHAKLP-STLSEFSNFLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTS 290 (383)
T ss_pred HHHHHhChHhhcEEEEECCCCccccccch-HHHHHHHHHHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCC
Confidence 99999999999999999987532211111 11111111 00001000000000000000000000000000000001110
Q ss_pred h----hhHHHHHHHHh-h----HHHHHhc--cCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCccccc
Q 025629 154 P----RLRTALELLKT-T----EGIERRL--EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE 222 (250)
Q Consensus 154 ~----~~~~~~~~~~~-~----~~~~~~~--~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 222 (250)
. ........+.. . .+....+ .++++|+++++|++|.+++.+..+.+.+. .+.++++++++||+++.
T Consensus 291 ~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~---~~a~l~vIp~aGH~~~~ 367 (383)
T PLN03084 291 GSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS---SQHKLIELPMAGHHVQE 367 (383)
T ss_pred cchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh---cCCeEEEECCCCCCcch
Confidence 0 01111111100 0 0111111 46799999999999999999888877776 36899999999999999
Q ss_pred CCchHHHHHHHHHHHHHHhh
Q 025629 223 GEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 223 ~~~~~~~~~~~~~i~~fl~~ 242 (250)
|+|++ +++.|.+|+.+
T Consensus 368 E~Pe~----v~~~I~~Fl~~ 383 (383)
T PLN03084 368 DCGEE----LGGIISGILSK 383 (383)
T ss_pred hCHHH----HHHHHHHHhhC
Confidence 99998 99999999863
No 25
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.93 E-value=1.8e-25 Score=158.20 Aligned_cols=195 Identities=22% Similarity=0.375 Sum_probs=129.8
Q ss_pred ccccccchhhHHHhhHHhhhhhhhh--------------------hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHH
Q 025629 18 WHHLDTEFSLWITLDLAFQQVFMAT--------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKV 77 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~~~~~~--------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~ 77 (250)
.||++.+...|..+++.|++.|+++ +.++++++.+++++++.++++++|||+||.+++.+
T Consensus 4 ~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~ 83 (228)
T PF12697_consen 4 LHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIALRL 83 (228)
T ss_dssp E-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccccccc
Confidence 5888889999999999998778777 35567888899999998999999999999999999
Q ss_pred HhhCCCceeeEEEeccccccCCCCC---CHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCch
Q 025629 78 HLKQPNAWSGAILVAPMCKIADDMV---PPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKP 154 (250)
Q Consensus 78 a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (250)
+.++|++|+++|+++|......... .................. .....+... ............
T Consensus 84 a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~--------- 150 (228)
T PF12697_consen 84 AARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRR---LASRFFYRW-FDGDEPEDLIRS--------- 150 (228)
T ss_dssp HHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH-HTHHHHHHHHHH---------
T ss_pred ccccccccccceeecccccccccccccccchhhhhhhhcccccccc---ccccccccc-cccccccccccc---------
Confidence 9999999999999999874321000 000111111000000000 000000000 000000000000
Q ss_pred hhHHHHHHHH---hhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchH
Q 025629 155 RLRTALELLK---TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDD 227 (250)
Q Consensus 155 ~~~~~~~~~~---~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 227 (250)
.......... ...+....+.++++|+++++|++|.+++.+..+.+.+.+ +++++++++++||++++++|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~ 224 (228)
T PF12697_consen 151 SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL--PNAELVVIPGAGHFLFLEQPDE 224 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS--TTEEEEEETTSSSTHHHHSHHH
T ss_pred cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC--CCCEEEEECCCCCccHHHCHHH
Confidence 1111222221 223455778888999999999999999999999999888 8899999999999999999998
No 26
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=7.9e-26 Score=168.96 Aligned_cols=208 Identities=13% Similarity=0.109 Sum_probs=126.3
Q ss_pred hHHHhhH---Hh-hhhhhhh----------------hhchHhHHHHhhccCCCCcE-EEEEeccchHHHHHHHhhCCCce
Q 025629 27 LWITLDL---AF-QQVFMAT----------------FPALTGWLMMSSSIIPTSKV-FLFGQSLGGAVALKVHLKQPNAW 85 (250)
Q Consensus 27 ~~~~~~~---~l-~~~~~~~----------------~~d~~~~~~~~~~~~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~v 85 (250)
.|..++. .| .++|+++ +.++++++.+++++++.+++ +|+||||||++++.+|.++|++|
T Consensus 84 ~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V 163 (343)
T PRK08775 84 WWEGLVGSGRALDPARFRLLAFDFIGADGSLDVPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARV 163 (343)
T ss_pred cchhccCCCCccCccccEEEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhh
Confidence 6888886 56 4678887 45788888999999998775 79999999999999999999999
Q ss_pred eeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCc-c---------------cCcchhhhhhhcccch-------hhh
Q 025629 86 SGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHK-L---------------VPQKDLAEAAFRDLKN-------REL 142 (250)
Q Consensus 86 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------~~~~~~~~~~~~~~~~-------~~~ 142 (250)
+++|++++...... .................... . .....+.. .+..... ...
T Consensus 164 ~~LvLi~s~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 239 (343)
T PRK08775 164 RTLVVVSGAHRAHP---YAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEE-RFDAPPEVINGRVRVAA 239 (343)
T ss_pred heEEEECccccCCH---HHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHH-HhCCCccccCCCccchH
Confidence 99999998653211 00000100011000000000 0 00000000 0000000 000
Q ss_pred h---hcccccccCchhhHHHHHHHHhhHHH-HHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCC-CC
Q 025629 143 T---KYNVIVYKDKPRLRTALELLKTTEGI-ERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKD-AF 217 (250)
Q Consensus 143 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g 217 (250)
. ....................... +. ...+.+|++|+|+++|++|.++|++..+.+.+.+. ++++++++++ +|
T Consensus 240 ~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~-p~a~l~~i~~~aG 317 (343)
T PRK08775 240 EDYLDAAGAQYVARTPVNAYLRLSESI-DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG-PRGSLRVLRSPYG 317 (343)
T ss_pred HHHHHHHHHHHHHhcChhHHHHHHHHH-hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC-CCCeEEEEeCCcc
Confidence 0 00000000000000011111111 11 12467899999999999999999998888888774 5799999985 99
Q ss_pred cccccCCchHHHHHHHHHHHHHHhhcC
Q 025629 218 HSLLEGEPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 218 H~~~~~~~~~~~~~~~~~i~~fl~~~~ 244 (250)
|.+++|+|++ +++.|.+||++.-
T Consensus 318 H~~~lE~Pe~----~~~~l~~FL~~~~ 340 (343)
T PRK08775 318 HDAFLKETDR----IDAILTTALRSTG 340 (343)
T ss_pred HHHHhcCHHH----HHHHHHHHHHhcc
Confidence 9999999998 9999999998753
No 27
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.93 E-value=6.8e-25 Score=156.87 Aligned_cols=208 Identities=16% Similarity=0.161 Sum_probs=126.4
Q ss_pred cccccccchhhHHHhhHHhhhhhhhh-----------------hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHh
Q 025629 17 SWHHLDTEFSLWITLDLAFQQVFMAT-----------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~~~~~~-----------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
-.||++.+...|..+.+.|+ .|+++ +.++++++.+++++++.++++++||||||.+++.+|.
T Consensus 7 llHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~ 85 (242)
T PRK11126 7 FLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYAC 85 (242)
T ss_pred EECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHH
Confidence 36999999999999999985 58887 5566777888999999999999999999999999999
Q ss_pred hCCCc-eeeEEEeccccccCCCCCCHHHHHHHH-HHHhhhcCCCcccCcchhhhhh-----hcccchhhhhhccc-cccc
Q 025629 80 KQPNA-WSGAILVAPMCKIADDMVPPFLVKQIL-IGIANILPKHKLVPQKDLAEAA-----FRDLKNRELTKYNV-IVYK 151 (250)
Q Consensus 80 ~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~ 151 (250)
++|+. |+++|++++....... ......... ......+... ......... +............. ....
T Consensus 86 ~~~~~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (242)
T PRK11126 86 QGLAGGLCGLIVEGGNPGLQNA--EERQARWQNDRQWAQRFRQE---PLEQVLADWYQQPVFASLNAEQRQQLVAKRSNN 160 (242)
T ss_pred hCCcccccEEEEeCCCCCCCCH--HHHHHHHhhhHHHHHHhccC---cHHHHHHHHHhcchhhccCccHHHHHHHhcccC
Confidence 99765 9999999876432211 000000000 0000000000 000000000 00000000000000 0000
Q ss_pred CchhhHHHHHHH--HhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHH
Q 025629 152 DKPRLRTALELL--KTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMI 229 (250)
Q Consensus 152 ~~~~~~~~~~~~--~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 229 (250)
............ ....+..+.+.++++|+++++|++|..+. .+.+. .++++++++++||+++.|+|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~---~~~~~~~i~~~gH~~~~e~p~~-- 230 (242)
T PRK11126 161 NGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ---LALPLHVIPNAGHNAHRENPAA-- 230 (242)
T ss_pred CHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH---hcCeEEEeCCCCCchhhhChHH--
Confidence 000111111110 11123456788999999999999998552 22232 3689999999999999999998
Q ss_pred HHHHHHHHHHHhh
Q 025629 230 IRVFADIISWLDD 242 (250)
Q Consensus 230 ~~~~~~i~~fl~~ 242 (250)
+++.|.+|++.
T Consensus 231 --~~~~i~~fl~~ 241 (242)
T PRK11126 231 --FAASLAQILRL 241 (242)
T ss_pred --HHHHHHHHHhh
Confidence 89999999864
No 28
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.93 E-value=5.1e-25 Score=155.09 Aligned_cols=225 Identities=16% Similarity=0.173 Sum_probs=137.9
Q ss_pred hhccccccccccchhhHHHhhHHhhhh-hhhh--------------------hhchHhHHHHhhccCCCCcEEEEEeccc
Q 025629 12 KELQGSWHHLDTEFSLWITLDLAFQQV-FMAT--------------------FPALTGWLMMSSSIIPTSKVFLFGQSLG 70 (250)
Q Consensus 12 g~~~g~~hg~~~~~~~~~~~~~~l~~~-~~~~--------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~G 70 (250)
|...-..||+...+.+|+.+.+.|+.+ |+++ +..+++++..++++++.++++++||+||
T Consensus 44 gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwG 123 (322)
T KOG4178|consen 44 GPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGLKKAFLVGHDWG 123 (322)
T ss_pred CCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhccceeEEEeccch
Confidence 333345899999999999999999998 8888 6677788899999999999999999999
Q ss_pred hHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHH-HHHHhhhcCCCcccCcc--------hhhhhhhcc-----
Q 025629 71 GAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQI-LIGIANILPKHKLVPQK--------DLAEAAFRD----- 136 (250)
Q Consensus 71 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~~~~~~~~----- 136 (250)
+.+|..+|..+|++|+++|+++.+... +...+....... ........-.....+.. ......+..
T Consensus 124 aivaw~la~~~Perv~~lv~~nv~~~~-p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~ 202 (322)
T KOG4178|consen 124 AIVAWRLALFYPERVDGLVTLNVPFPN-PKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGP 202 (322)
T ss_pred hHHHHHHHHhChhhcceEEEecCCCCC-cccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCc
Confidence 999999999999999999999876551 110000000000 00000000000000000 000000000
Q ss_pred --------cc----hhhhhhcccccccC---chhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChH-HHHHHH
Q 025629 137 --------LK----NRELTKYNVIVYKD---KPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPS-VSKALY 200 (250)
Q Consensus 137 --------~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~-~~~~~~ 200 (250)
.. ..+..+.....+.. ...+..+..+.+........+.++++|+++++|+.|.+.+.. ....+.
T Consensus 203 ~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~r 282 (322)
T KOG4178|consen 203 LIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYR 282 (322)
T ss_pred cccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCcccccchhHHHHHH
Confidence 00 00000000000000 011122222222222123456778999999999999998766 344444
Q ss_pred HHhCCCCc-EEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhc
Q 025629 201 EKASSKDK-KCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 201 ~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
+.+ ++. +.++++++||+++.|+|++ +++.+.+|+++.
T Consensus 283 k~v--p~l~~~vv~~~~gH~vqqe~p~~----v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 283 KDV--PRLTERVVIEGIGHFVQQEKPQE----VNQAILGFINSF 320 (322)
T ss_pred Hhh--ccccceEEecCCcccccccCHHH----HHHHHHHHHHhh
Confidence 445 443 7889999999999999999 999999999864
No 29
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.93 E-value=1.8e-24 Score=152.94 Aligned_cols=220 Identities=19% Similarity=0.236 Sum_probs=133.9
Q ss_pred ccccccchhhHHHhhHHhhhhhhhhh----------------------hchHhHHHHhhccCCCCcEEEEEeccchHHHH
Q 025629 18 WHHLDTEFSLWITLDLAFQQVFMATF----------------------PALTGWLMMSSSIIPTSKVFLFGQSLGGAVAL 75 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~~~~~~~----------------------~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~ 75 (250)
.||+|.+...|....+.|++...++. ..+.+-+++.....++.+.+|+|||+||++|.
T Consensus 96 iHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa 175 (365)
T KOG4409|consen 96 IHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAA 175 (365)
T ss_pred EeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHH
Confidence 59999999999999999998776663 34455556677778899999999999999999
Q ss_pred HHHhhCCCceeeEEEeccccccCCCC-------CCHHHHHHHHHHHhhhcCCC--c---ccCc---chhhhhhhccc---
Q 025629 76 KVHLKQPNAWSGAILVAPMCKIADDM-------VPPFLVKQILIGIANILPKH--K---LVPQ---KDLAEAAFRDL--- 137 (250)
Q Consensus 76 ~~a~~~p~~v~~lvl~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~---~~~~---~~~~~~~~~~~--- 137 (250)
.||.+||++|+.|||++|........ .++..............+.. + .... ..+....+...
T Consensus 176 ~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~ 255 (365)
T KOG4409|consen 176 KYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSL 255 (365)
T ss_pred HHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhcccc
Confidence 99999999999999999987655321 12222211111111110000 0 0000 00001111111
Q ss_pred chhh-hhhcccccccCchhhHHHHH-HHHh----hHHHHHhccCCC--CCEEEEeeCCCcccChHHHHHHHHHhCCCCcE
Q 025629 138 KNRE-LTKYNVIVYKDKPRLRTALE-LLKT----TEGIERRLEKVS--LPLLILHGENDTVTDPSVSKALYEKASSKDKK 209 (250)
Q Consensus 138 ~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~i~--~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 209 (250)
...+ ...+........+.-...+. ++.. .....+.+..++ ||+++|+|++| +++.....++.+.+....++
T Consensus 256 ~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~d-WmD~~~g~~~~~~~~~~~~~ 334 (365)
T KOG4409|consen 256 IEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRD-WMDKNAGLEVTKSLMKEYVE 334 (365)
T ss_pred chhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcc-cccchhHHHHHHHhhcccce
Confidence 0111 11222222222222222222 1111 112234455554 99999999998 55566666666654446699
Q ss_pred EEEeCCCCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 210 CILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 210 ~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
.++++++||.++.++|+. |++.+..+++.
T Consensus 335 ~~~v~~aGHhvylDnp~~----Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 335 IIIVPGAGHHVYLDNPEF----FNQIVLEECDK 363 (365)
T ss_pred EEEecCCCceeecCCHHH----HHHHHHHHHhc
Confidence 999999999999999999 77877777754
No 30
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.92 E-value=6e-24 Score=154.07 Aligned_cols=202 Identities=25% Similarity=0.341 Sum_probs=129.7
Q ss_pred hhchHhHHHHhhccC----CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhc
Q 025629 43 FPALTGWLMMSSSII----PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANIL 118 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (250)
+.++.+++..+++.. +..+++++||||||.|++.++.+++.+|+++|+.+|....................+.+..
T Consensus 86 f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~ 165 (298)
T COG2267 86 FADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIR 165 (298)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccc
Confidence 456666666666554 4689999999999999999999999999999999999876530011111112222223333
Q ss_pred CCCcccC---cchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhH-HHHHhccCCCCCEEEEeeCCCcccC-h
Q 025629 119 PKHKLVP---QKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTE-GIERRLEKVSLPLLILHGENDTVTD-P 193 (250)
Q Consensus 119 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~Pvl~i~g~~D~~~~-~ 193 (250)
+...... .........++.........+..................... ........+++|+|+++|++|.+++ .
T Consensus 166 p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~ 245 (298)
T COG2267 166 PKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNV 245 (298)
T ss_pred cccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCc
Confidence 3222221 011111111222222222222222222233333333333332 2334566789999999999999999 7
Q ss_pred HHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhcCC
Q 025629 194 SVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSR 245 (250)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 245 (250)
+...++.+..+.+++++++++++.|.++.|.+. .++++.+.+.+|+.+...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~-~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 246 EGLARFFERAGSPDKELKVIPGAYHELLNEPDR-AREEVLKDILAWLAEALP 296 (298)
T ss_pred HHHHHHHHhcCCCCceEEecCCcchhhhcCcch-HHHHHHHHHHHHHHhhcc
Confidence 888899999888889999999999999997665 336799999999998764
No 31
>PRK06489 hypothetical protein; Provisional
Probab=99.92 E-value=4.4e-24 Score=160.56 Aligned_cols=218 Identities=14% Similarity=0.146 Sum_probs=127.0
Q ss_pred cccccccchhhHH--HhhHHh--------hhhhhhhh-------------------------hchHhHHHH-hhccCCCC
Q 025629 17 SWHHLDTEFSLWI--TLDLAF--------QQVFMATF-------------------------PALTGWLMM-SSSIIPTS 60 (250)
Q Consensus 17 ~~hg~~~~~~~~~--~~~~~l--------~~~~~~~~-------------------------~d~~~~~~~-~~~~~~~~ 60 (250)
-.||++.+...|. .+.+.+ .+.|+|+. .++++++.. ++++++.+
T Consensus 74 llHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~ 153 (360)
T PRK06489 74 VLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVK 153 (360)
T ss_pred EeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 3699998887775 343333 55677761 234444444 34778888
Q ss_pred cEE-EEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHH-HHHHHHhhhcCC--CcccCcc-hhhhh--h
Q 025629 61 KVF-LFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVK-QILIGIANILPK--HKLVPQK-DLAEA--A 133 (250)
Q Consensus 61 ~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~-~~~~~--~ 133 (250)
+++ |+||||||++|+.+|.++|++|+++|++++....... ...... .....+...... ....... ..... .
T Consensus 154 ~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (360)
T PRK06489 154 HLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSG--RNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPM 231 (360)
T ss_pred ceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccH--HHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHH
Confidence 885 8999999999999999999999999999875421110 011011 111111111000 0000000 00000 0
Q ss_pred -----------h--cccch---hhhhhcccccccCchhhHHHHHHHH--hhHHHHHhccCCCCCEEEEeeCCCcccChHH
Q 025629 134 -----------F--RDLKN---RELTKYNVIVYKDKPRLRTALELLK--TTEGIERRLEKVSLPLLILHGENDTVTDPSV 195 (250)
Q Consensus 134 -----------~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~ 195 (250)
+ ..... ............. ........... ...+..+.+.+|++|+|+|+|++|.++|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~ 310 (360)
T PRK06489 232 FAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVT-ADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPET 310 (360)
T ss_pred HHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhh-cCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhh
Confidence 0 00000 0000000000000 00111111111 1113456788999999999999999999887
Q ss_pred H--HHHHHHhCCCCcEEEEeCCC----CcccccCCchHHHHHHHHHHHHHHhhcC
Q 025629 196 S--KALYEKASSKDKKCILYKDA----FHSLLEGEPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 196 ~--~~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 244 (250)
+ +.+.+.+ ++.++++++++ ||.++ ++|++ +++.|.+|++++-
T Consensus 311 ~~~~~la~~i--p~a~l~~i~~a~~~~GH~~~-e~P~~----~~~~i~~FL~~~~ 358 (360)
T PRK06489 311 GVMEAALKRV--KHGRLVLIPASPETRGHGTT-GSAKF----WKAYLAEFLAQVP 358 (360)
T ss_pred HHHHHHHHhC--cCCeEEEECCCCCCCCcccc-cCHHH----HHHHHHHHHHhcc
Confidence 5 7788888 89999999996 99997 89998 9999999998753
No 32
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.92 E-value=6.5e-24 Score=152.40 Aligned_cols=212 Identities=17% Similarity=0.214 Sum_probs=127.4
Q ss_pred ccccccchhhHHHhhHHhhhhhhhh--------------------hhchHhH-HHHhhccCCCCcEEEEEeccchHHHHH
Q 025629 18 WHHLDTEFSLWITLDLAFQQVFMAT--------------------FPALTGW-LMMSSSIIPTSKVFLFGQSLGGAVALK 76 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~~~~~~--------------------~~d~~~~-~~~~~~~~~~~~~~lvGhS~Gg~~a~~ 76 (250)
.||++.+...|..+++.|.+.++++ +.+++.+ +..+++.++.++++++||||||.+++.
T Consensus 7 ~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~ 86 (251)
T TIGR03695 7 LHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALY 86 (251)
T ss_pred EcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHH
Confidence 5888888999999999998667776 3344545 566677778889999999999999999
Q ss_pred HHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhh-----hcc-----cchhhhhhcc
Q 025629 77 VHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAA-----FRD-----LKNRELTKYN 146 (250)
Q Consensus 77 ~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~ 146 (250)
+|.++|++|+++|++++................... ....+... ......... +.. ..........
T Consensus 87 ~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (251)
T TIGR03695 87 YALQYPERVQGLILESGSPGLATEEERAARRQNDEQ-LAQRFEQE---GLEAFLDDWYQQPLFASQKNLPPEQRQALRAK 162 (251)
T ss_pred HHHhCchheeeeEEecCCCCcCchHhhhhhhhcchh-hhhHHHhc---CccHHHHHHhcCceeeecccCChHHhHHHHHh
Confidence 999999999999999986543221100000000000 00000000 000000000 000 0000000000
Q ss_pred cccccCchhhHHHHHHH--HhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCC
Q 025629 147 VIVYKDKPRLRTALELL--KTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGE 224 (250)
Q Consensus 147 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 224 (250)
................ ....+....+.++++|+++++|++|..++ +..+.+.+.. +++++++++++||++++++
T Consensus 163 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~ 238 (251)
T TIGR03695 163 -RLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL--PNLTLVIIANAGHNIHLEN 238 (251)
T ss_pred -cccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC--CCCcEEEEcCCCCCcCccC
Confidence 0000011111111111 01112335567899999999999998764 5566676666 7899999999999999999
Q ss_pred chHHHHHHHHHHHHHHh
Q 025629 225 PDDMIIRVFADIISWLD 241 (250)
Q Consensus 225 ~~~~~~~~~~~i~~fl~ 241 (250)
|++ +.+.|.+|++
T Consensus 239 ~~~----~~~~i~~~l~ 251 (251)
T TIGR03695 239 PEA----FAKILLAFLE 251 (251)
T ss_pred hHH----HHHHHHHHhC
Confidence 988 8999999974
No 33
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=3.1e-23 Score=157.19 Aligned_cols=223 Identities=17% Similarity=0.146 Sum_probs=126.8
Q ss_pred cccccccchhhHHHhhHHhhhhhhhhhhc-----------------------hHhHHHHhhccCCCCcEEEEEeccchHH
Q 025629 17 SWHHLDTEFSLWITLDLAFQQVFMATFPA-----------------------LTGWLMMSSSIIPTSKVFLFGQSLGGAV 73 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~~~~~~~~d-----------------------~~~~~~~~~~~~~~~~~~lvGhS~Gg~~ 73 (250)
-.||++.+...|...+..|.++|+++..| +.+++.++++.++.++++|+||||||.+
T Consensus 110 llHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~l 189 (402)
T PLN02894 110 MVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYV 189 (402)
T ss_pred EECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHH
Confidence 36999999999988888898888887221 3344556667778889999999999999
Q ss_pred HHHHHhhCCCceeeEEEeccccccCCCCCCHHHHH-----HHHHHHhhhcCCCcccCcc----------hhhh----hhh
Q 025629 74 ALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVK-----QILIGIANILPKHKLVPQK----------DLAE----AAF 134 (250)
Q Consensus 74 a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~----------~~~~----~~~ 134 (250)
++.+|.++|++|+++|+++|............... .....+..... ....+.. .+.. ..+
T Consensus 190 a~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~gp~~~~l~~~~~~~~~ 268 (402)
T PLN02894 190 AAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWE-SNFTPQKIIRGLGPWGPNLVRRYTTARF 268 (402)
T ss_pred HHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhh-cCCCHHHHHHhccchhHHHHHHHHHHHh
Confidence 99999999999999999998754332111000000 00000000000 0000000 0000 000
Q ss_pred ccc---------chhhhhhcccccccCchhhHHHHHHHH-----hhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHH
Q 025629 135 RDL---------KNRELTKYNVIVYKDKPRLRTALELLK-----TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALY 200 (250)
Q Consensus 135 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~ 200 (250)
... .......+................... ...+....+.++++|+++|+|++|.+.+ .....+.
T Consensus 269 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~ 347 (402)
T PLN02894 269 GAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEAR 347 (402)
T ss_pred hhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHH
Confidence 000 000000000000000000000011110 1124456688899999999999998765 5555566
Q ss_pred HHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 201 EKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 201 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
+... +.+++++++++||+++.|+|+++.+.+.+.+..|+.+
T Consensus 348 ~~~~-~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 348 KRMK-VPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred HHcC-CCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccC
Confidence 6552 4688999999999999999999444444444444443
No 34
>PRK07581 hypothetical protein; Validated
Probab=99.91 E-value=5e-24 Score=159.39 Aligned_cols=71 Identities=13% Similarity=-0.018 Sum_probs=63.6
Q ss_pred HHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCC-CCcccccCCchHHHHHHHHHHHHHHhhcC
Q 025629 168 GIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKD-AFHSLLEGEPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 168 ~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 244 (250)
+....+.+|++|+|+|+|++|.++|++..+.+.+.+ ++++++++++ +||..++++|+. +...|.+|+++.+
T Consensus 266 d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i--p~a~l~~i~~~~GH~~~~~~~~~----~~~~~~~~~~~~~ 337 (339)
T PRK07581 266 DLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI--PNAELRPIESIWGHLAGFGQNPA----DIAFIDAALKELL 337 (339)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEeCCCCCccccccCcHH----HHHHHHHHHHHHH
Confidence 455678889999999999999999999999999988 8899999998 999999999998 8888888887754
No 35
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.91 E-value=9e-24 Score=159.54 Aligned_cols=194 Identities=12% Similarity=0.115 Sum_probs=116.9
Q ss_pred hchHhHHHHhhccCCCCc-EEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhh--hcCC
Q 025629 44 PALTGWLMMSSSIIPTSK-VFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIAN--ILPK 120 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 120 (250)
.++++++..++++++.++ ++++||||||.+++.+|.++|++|+++|++++........ ..........+.. .+..
T Consensus 130 ~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~ 207 (379)
T PRK00175 130 RDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQN--IAFNEVARQAILADPDWHG 207 (379)
T ss_pred HHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHH--HHHHHHHHHHHHhCCCCCC
Confidence 356667789999999999 4899999999999999999999999999999866432110 0011111111100 0000
Q ss_pred Cc-----ccCcch----------------hhhhhhcccch-h-------------hhhhc---ccccccCchhhHHHHHH
Q 025629 121 HK-----LVPQKD----------------LAEAAFRDLKN-R-------------ELTKY---NVIVYKDKPRLRTALEL 162 (250)
Q Consensus 121 ~~-----~~~~~~----------------~~~~~~~~~~~-~-------------~~~~~---~~~~~~~~~~~~~~~~~ 162 (250)
.. ..+... .....+..... . ..... .................
T Consensus 208 g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~ 287 (379)
T PRK00175 208 GDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLTRA 287 (379)
T ss_pred CCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHHHH
Confidence 00 000000 00000000000 0 00000 00000000001111111
Q ss_pred HHhh-------HHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCc----EEEEeC-CCCcccccCCchHHHH
Q 025629 163 LKTT-------EGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDK----KCILYK-DAFHSLLEGEPDDMII 230 (250)
Q Consensus 163 ~~~~-------~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~gH~~~~~~~~~~~~ 230 (250)
+... .++.+.+.+|++|+|+|+|++|.++|++.++.+.+.+ ++. ++++++ ++||.+++++|++
T Consensus 288 ~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i--~~a~~~~~l~~i~~~~GH~~~le~p~~--- 362 (379)
T PRK00175 288 LDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDAL--LAAGADVSYAEIDSPYGHDAFLLDDPR--- 362 (379)
T ss_pred HHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHH--HhcCCCeEEEEeCCCCCchhHhcCHHH---
Confidence 1111 1356778899999999999999999999999999999 555 777775 8999999999998
Q ss_pred HHHHHHHHHHhhcCC
Q 025629 231 RVFADIISWLDDHSR 245 (250)
Q Consensus 231 ~~~~~i~~fl~~~~~ 245 (250)
+++.|.+||++...
T Consensus 363 -~~~~L~~FL~~~~~ 376 (379)
T PRK00175 363 -YGRLVRAFLERAAR 376 (379)
T ss_pred -HHHHHHHHHHhhhh
Confidence 99999999988654
No 36
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.90 E-value=1.2e-22 Score=148.87 Aligned_cols=213 Identities=16% Similarity=0.179 Sum_probs=124.3
Q ss_pred cccccc-cchhhHHHhhHHhhh-hhhhh---------------------hhchHhHHHHhhccCCCCcEEEEEeccchHH
Q 025629 17 SWHHLD-TEFSLWITLDLAFQQ-VFMAT---------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAV 73 (250)
Q Consensus 17 ~~hg~~-~~~~~~~~~~~~l~~-~~~~~---------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~ 73 (250)
-.||+. ++...|..+...+.+ .|+++ +.++++++..++++++.++++++||||||.+
T Consensus 30 ~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~i 109 (288)
T TIGR01250 30 LLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGML 109 (288)
T ss_pred EEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHH
Confidence 368864 444556666666665 46666 2446677788888888889999999999999
Q ss_pred HHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHH--------HHhhhcCCCcccCc--chhhhhhh-----cccc
Q 025629 74 ALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILI--------GIANILPKHKLVPQ--KDLAEAAF-----RDLK 138 (250)
Q Consensus 74 a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~--~~~~~~~~-----~~~~ 138 (250)
++.+|.++|++++++|++++....... ......... .+............ ........ ....
T Consensus 110 a~~~a~~~p~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (288)
T TIGR01250 110 AQEYALKYGQHLKGLIISSMLDSAPEY---VKELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRK 186 (288)
T ss_pred HHHHHHhCccccceeeEecccccchHH---HHHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhccccc
Confidence 999999999999999999875432110 000000000 00000000000000 00000000 0000
Q ss_pred hhhhhhcccccc--------cCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEE
Q 025629 139 NRELTKYNVIVY--------KDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKC 210 (250)
Q Consensus 139 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (250)
............ ....... ..... ...+....+.++++|+++++|++|.+ +++..+.+.+.+ ++.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~--~~~~~ 261 (288)
T TIGR01250 187 WPEALKHLKSGMNTNVYNIMQGPNEFT-ITGNL-KDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELI--AGSRL 261 (288)
T ss_pred chHHHHHHhhccCHHHHhcccCCcccc-ccccc-cccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhc--cCCeE
Confidence 000000000000 0000000 00000 01133456778999999999999985 667788888887 78899
Q ss_pred EEeCCCCcccccCCchHHHHHHHHHHHHHHh
Q 025629 211 ILYKDAFHSLLEGEPDDMIIRVFADIISWLD 241 (250)
Q Consensus 211 ~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 241 (250)
++++++||+++.++|++ +.+.|.+|++
T Consensus 262 ~~~~~~gH~~~~e~p~~----~~~~i~~fl~ 288 (288)
T TIGR01250 262 VVFPDGSHMTMIEDPEV----YFKLLSDFIR 288 (288)
T ss_pred EEeCCCCCCcccCCHHH----HHHHHHHHhC
Confidence 99999999999999998 8999999974
No 37
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.90 E-value=1.7e-23 Score=156.97 Aligned_cols=190 Identities=15% Similarity=0.128 Sum_probs=112.7
Q ss_pred hchHhHHHHhhccCCCCc-EEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhh--cCC
Q 025629 44 PALTGWLMMSSSIIPTSK-VFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANI--LPK 120 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 120 (250)
.++++++..++++++.++ ++++||||||.+++.+|.++|++|+++|++++........ ..........+... ...
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 187 (351)
T TIGR01392 110 RDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWC--IAFNEVQRQAILADPNWND 187 (351)
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHH--HHHHHHHHHHHHhCCCCCC
Confidence 456677788889999998 9999999999999999999999999999999876432210 00111111111100 000
Q ss_pred Cccc----Ccchh----------------hhhhhcccc-hh--------------hhhhc---ccccccCchhhHHHHHH
Q 025629 121 HKLV----PQKDL----------------AEAAFRDLK-NR--------------ELTKY---NVIVYKDKPRLRTALEL 162 (250)
Q Consensus 121 ~~~~----~~~~~----------------~~~~~~~~~-~~--------------~~~~~---~~~~~~~~~~~~~~~~~ 162 (250)
.... +.... ....+.... .. ..... .................
T Consensus 188 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 267 (351)
T TIGR01392 188 GDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLTRA 267 (351)
T ss_pred CCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHhhcCcchHHHHHHH
Confidence 0000 00000 000000000 00 00000 00000000000011111
Q ss_pred HHhh------HHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEE-----EeCCCCcccccCCchHHHHH
Q 025629 163 LKTT------EGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCI-----LYKDAFHSLLEGEPDDMIIR 231 (250)
Q Consensus 163 ~~~~------~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~gH~~~~~~~~~~~~~ 231 (250)
+... .+..+.+++|++|+|+|+|++|.++|++.++.+.+.+ ++.++. +++++||.+++++|++
T Consensus 268 l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i--~~~~~~v~~~~i~~~~GH~~~le~p~~---- 341 (351)
T TIGR01392 268 LDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKAL--PAAGLRVTYVEIESPYGHDAFLVETDQ---- 341 (351)
T ss_pred HHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHH--hhcCCceEEEEeCCCCCcchhhcCHHH----
Confidence 1111 1245778899999999999999999999999999999 666554 5578999999999998
Q ss_pred HHHHHHHHHh
Q 025629 232 VFADIISWLD 241 (250)
Q Consensus 232 ~~~~i~~fl~ 241 (250)
+++.|.+||+
T Consensus 342 ~~~~l~~FL~ 351 (351)
T TIGR01392 342 VEELIRGFLR 351 (351)
T ss_pred HHHHHHHHhC
Confidence 9999999974
No 38
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.90 E-value=7.6e-22 Score=146.31 Aligned_cols=230 Identities=16% Similarity=0.251 Sum_probs=136.4
Q ss_pred hhhhhhhhhhhccccccccccchhh-HHHhhHHhhhhhhhhhhchHhHHHHhhc-------------------cCC-CCc
Q 025629 3 METLAHFSLKELQGSWHHLDTEFSL-WITLDLAFQQVFMATFPALTGWLMMSSS-------------------IIP-TSK 61 (250)
Q Consensus 3 ~~~~~~~G~g~~~g~~hg~~~~~~~-~~~~~~~l~~~~~~~~~d~~~~~~~~~~-------------------~~~-~~~ 61 (250)
++.|+..|+...+-+..|.|.+... ... .....+..++.|+...+..+.+ ..+ ..|
T Consensus 67 ~~~l~~~G~~V~~~D~rGHG~S~~~~~~~---g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 143 (332)
T TIGR01607 67 IENFNKNGYSVYGLDLQGHGESDGLQNLR---GHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLP 143 (332)
T ss_pred HHHHHHCCCcEEEecccccCCCccccccc---cchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCc
Confidence 5677788888777777666543321 100 0001223233333333333322 223 468
Q ss_pred EEEEEeccchHHHHHHHhhCCC--------ceeeEEEeccccccCCCC-----CCHHHHHHHHHHHhhhcCCCcccCcch
Q 025629 62 VFLFGQSLGGAVALKVHLKQPN--------AWSGAILVAPMCKIADDM-----VPPFLVKQILIGIANILPKHKLVPQKD 128 (250)
Q Consensus 62 ~~lvGhS~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (250)
++|+||||||.+++.++.++++ .++++|+++|........ ........+...+..+.+........
T Consensus 144 ~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~- 222 (332)
T TIGR01607 144 MYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKI- 222 (332)
T ss_pred eeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCcc-
Confidence 9999999999999999876542 589999999876432211 01122222333334444433221100
Q ss_pred hhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCC--CCCEEEEeeCCCcccChHHHHHHHHHhCCC
Q 025629 129 LAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKV--SLPLLILHGENDTVTDPSVSKALYEKASSK 206 (250)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~ 206 (250)
....++........+...+...........++.........+..+ ++|+|+++|++|.+++++.++.+++.+..+
T Consensus 223 ---~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~ 299 (332)
T TIGR01607 223 ---RYEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSIS 299 (332)
T ss_pred ---ccccChhhhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCC
Confidence 011111112222222222223344555556665554454556666 799999999999999999999998887667
Q ss_pred CcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 207 DKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 207 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
+++++++++++|.++.|... +++.+.|.+||++
T Consensus 300 ~~~l~~~~g~~H~i~~E~~~---~~v~~~i~~wL~~ 332 (332)
T TIGR01607 300 NKELHTLEDMDHVITIEPGN---EEVLKKIIEWISN 332 (332)
T ss_pred CcEEEEECCCCCCCccCCCH---HHHHHHHHHHhhC
Confidence 89999999999999987532 2489999999863
No 39
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.90 E-value=1.2e-22 Score=146.86 Aligned_cols=211 Identities=16% Similarity=0.178 Sum_probs=125.8
Q ss_pred cccccccchhhHHHhhHHhhh-hhhhh-------------------hhchHhHHHHhhccCC-CCcEEEEEeccchHHHH
Q 025629 17 SWHHLDTEFSLWITLDLAFQQ-VFMAT-------------------FPALTGWLMMSSSIIP-TSKVFLFGQSLGGAVAL 75 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~-~~~~~-------------------~~d~~~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~ 75 (250)
-.||++.+...|..+...|.+ .|+++ ++++++++.++++++. .++++|+||||||.++.
T Consensus 23 liHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~ 102 (273)
T PLN02211 23 LIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVT 102 (273)
T ss_pred EECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHH
Confidence 469999999999999999975 47776 3455666777777774 58999999999999999
Q ss_pred HHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCC----CcccC----c-----chhhhhh-hcccchhh
Q 025629 76 KVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPK----HKLVP----Q-----KDLAEAA-FRDLKNRE 141 (250)
Q Consensus 76 ~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----~-----~~~~~~~-~~~~~~~~ 141 (250)
.++.++|++|+++|++++................ ...+...... ..... . ....... +..... .
T Consensus 103 ~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 180 (273)
T PLN02211 103 QAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDG-VPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMSPQ-E 180 (273)
T ss_pred HHHHhChhheeEEEEeccccCCCCCCHHHHHhcc-ccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCCCH-H
Confidence 9999999999999999875431110000000000 0000000000 00000 0 0000000 000000 0
Q ss_pred hhhcccccccCchhhHHHHHHHHhhHHHHHhccCC-CCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCccc
Q 025629 142 LTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKV-SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSL 220 (250)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 220 (250)
........ ...... ..+.. .+..+...++ ++|+++|.|++|..+|++..+.+.+.+ +..+++.++ +||.+
T Consensus 181 ~~~~~~~~-~~~~~~----~~~~~-~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~--~~~~~~~l~-~gH~p 251 (273)
T PLN02211 181 DSTLAAML-LRPGPI----LALRS-ARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRW--PPSQVYELE-SDHSP 251 (273)
T ss_pred HHHHHHHh-cCCcCc----ccccc-ccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhC--CccEEEEEC-CCCCc
Confidence 00000000 000000 00000 0111223345 789999999999999999999999998 677899997 89999
Q ss_pred ccCCchHHHHHHHHHHHHHHhh
Q 025629 221 LEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 221 ~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
++++|++ +.+.|.+....
T Consensus 252 ~ls~P~~----~~~~i~~~a~~ 269 (273)
T PLN02211 252 FFSTPFL----LFGLLIKAAAS 269 (273)
T ss_pred cccCHHH----HHHHHHHHHHH
Confidence 9999999 77777766543
No 40
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.90 E-value=2.5e-23 Score=157.84 Aligned_cols=204 Identities=19% Similarity=0.273 Sum_probs=130.9
Q ss_pred cccccccchhhHHHhhHHhhhhhhhh------------------hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHH
Q 025629 17 SWHHLDTEFSLWITLDLAFQQVFMAT------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVH 78 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~~~~~~------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a 78 (250)
-.||++++...|..+...|...|+++ +.++++++..+++.++..+++++||||||.+++.+|
T Consensus 136 ~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a 215 (371)
T PRK14875 136 LIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLA 215 (371)
T ss_pred EECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHH
Confidence 37999999999999999998877776 556677778888888888999999999999999999
Q ss_pred hhCCCceeeEEEeccccccCCCCCCHHHHHHH---------HHHHhhhcCCCcccCcchhhhhhhcccchhhhhhccccc
Q 025629 79 LKQPNAWSGAILVAPMCKIADDMVPPFLVKQI---------LIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIV 149 (250)
Q Consensus 79 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (250)
.++|++++++|+++|....... .......+ ...+........... ...... ........
T Consensus 216 ~~~~~~v~~lv~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~ 283 (371)
T PRK14875 216 ARAPQRVASLTLIAPAGLGPEI--NGDYIDGFVAAESRRELKPVLELLFADPALVT-RQMVED---------LLKYKRLD 283 (371)
T ss_pred HhCchheeEEEEECcCCcCccc--chhHHHHhhcccchhHHHHHHHHHhcChhhCC-HHHHHH---------HHHHhccc
Confidence 9999999999999886432211 01110000 000000000000000 000000 00000000
Q ss_pred ccCchhhHHHHHH-H---HhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCc
Q 025629 150 YKDKPRLRTALEL-L---KTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEP 225 (250)
Q Consensus 150 ~~~~~~~~~~~~~-~---~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 225 (250)
............ + ....+....+.++++|+|+++|++|.++|++..+.+ . ++.++.+++++||++++++|
T Consensus 284 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l----~-~~~~~~~~~~~gH~~~~e~p 357 (371)
T PRK14875 284 -GVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL----P-DGVAVHVLPGAGHMPQMEAA 357 (371)
T ss_pred -cHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc----c-CCCeEEEeCCCCCChhhhCH
Confidence 000000000000 0 001234456778899999999999999998765443 2 56899999999999999999
Q ss_pred hHHHHHHHHHHHHHHhh
Q 025629 226 DDMIIRVFADIISWLDD 242 (250)
Q Consensus 226 ~~~~~~~~~~i~~fl~~ 242 (250)
++ +.+.|.+|+++
T Consensus 358 ~~----~~~~i~~fl~~ 370 (371)
T PRK14875 358 AD----VNRLLAEFLGK 370 (371)
T ss_pred HH----HHHHHHHHhcc
Confidence 88 99999999975
No 41
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.89 E-value=1.1e-21 Score=129.98 Aligned_cols=165 Identities=19% Similarity=0.258 Sum_probs=113.0
Q ss_pred hhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhh
Q 025629 53 SSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEA 132 (250)
Q Consensus 53 ~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (250)
.+...+.+.|.++|-||||.+++.+|..+| ++++|.++++....+..............+.+...
T Consensus 78 ~L~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~------------- 142 (243)
T COG1647 78 DLKEAGYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEG------------- 142 (243)
T ss_pred HHHHcCCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccC-------------
Confidence 344456789999999999999999999999 89999999887654432221111111111111100
Q ss_pred hhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEE
Q 025629 133 AFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCIL 212 (250)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 212 (250)
.. .+........+. ........++.....+....+..|..|++++.|.+|+++|.+.+..+++.+.+.+.++..
T Consensus 143 ----k~-~e~~~~e~~~~~-~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~ 216 (243)
T COG1647 143 ----KD-QEQIDKEMKSYK-DTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKW 216 (243)
T ss_pred ----CC-HHHHHHHHHHhh-cchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEE
Confidence 00 000011111111 112233334444445677888999999999999999999999999999999878899999
Q ss_pred eCCCCcccccCCchHHHHHHHHHHHHHHh
Q 025629 213 YKDAFHSLLEGEPDDMIIRVFADIISWLD 241 (250)
Q Consensus 213 ~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 241 (250)
++++||.+..+...+ ++.+.+..||+
T Consensus 217 ~e~SgHVIt~D~Erd---~v~e~V~~FL~ 242 (243)
T COG1647 217 LEGSGHVITLDKERD---QVEEDVITFLE 242 (243)
T ss_pred EccCCceeecchhHH---HHHHHHHHHhh
Confidence 999999998876554 59999999986
No 42
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.89 E-value=9.6e-23 Score=176.23 Aligned_cols=221 Identities=19% Similarity=0.212 Sum_probs=134.7
Q ss_pred cccccccchhhHHHhhHHhhhhhhhhh--------------------------hchHhHHHHhhccCCCCcEEEEEeccc
Q 025629 17 SWHHLDTEFSLWITLDLAFQQVFMATF--------------------------PALTGWLMMSSSIIPTSKVFLFGQSLG 70 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~~~~~~~--------------------------~d~~~~~~~~~~~~~~~~~~lvGhS~G 70 (250)
-.||++.+...|..+...|...|+++. +++++++..++++++.++++|+|||||
T Consensus 1376 llHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmG 1455 (1655)
T PLN02980 1376 FLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMG 1455 (1655)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHH
Confidence 369999999999999999988787772 234555667788888899999999999
Q ss_pred hHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhccc------chhhhhh
Q 025629 71 GAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDL------KNRELTK 144 (250)
Q Consensus 71 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 144 (250)
|.+++.++.++|++|+++|++++......... ..............+... ....+...++... .......
T Consensus 1456 G~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~-~~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~ 1531 (1655)
T PLN02980 1456 ARIALYMALRFSDKIEGAVIISGSPGLKDEVA-RKIRSAKDDSRARMLIDH---GLEIFLENWYSGELWKSLRNHPHFNK 1531 (1655)
T ss_pred HHHHHHHHHhChHhhCEEEEECCCCccCchHH-HHHHhhhhhHHHHHHHhh---hHHHHHHHhccHHHhhhhccCHHHHH
Confidence 99999999999999999999987543221100 000000000000000000 0000000000000 0000000
Q ss_pred cccccc--cCchhhHHHHHHHH--hhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCC----------CcEE
Q 025629 145 YNVIVY--KDKPRLRTALELLK--TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSK----------DKKC 210 (250)
Q Consensus 145 ~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~----------~~~~ 210 (250)
...... ............+. ...+..+.+.++++|+|+|+|++|..++ +.+.++.+.++.. .+++
T Consensus 1532 ~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~l 1610 (1655)
T PLN02980 1532 IVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEI 1610 (1655)
T ss_pred HHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEE
Confidence 000000 00011111111111 1123456788999999999999999875 6666777776321 2589
Q ss_pred EEeCCCCcccccCCchHHHHHHHHHHHHHHhhcCCC
Q 025629 211 ILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRS 246 (250)
Q Consensus 211 ~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 246 (250)
++++++||.+++|+|++ +++.|.+||.+....
T Consensus 1611 vvI~~aGH~~~lE~Pe~----f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1611 VEIPNCGHAVHLENPLP----VIRALRKFLTRLHNS 1642 (1655)
T ss_pred EEECCCCCchHHHCHHH----HHHHHHHHHHhcccc
Confidence 99999999999999998 999999999976543
No 43
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.88 E-value=1.7e-21 Score=146.08 Aligned_cols=195 Identities=12% Similarity=0.055 Sum_probs=119.5
Q ss_pred hhchHhHHHHhhccCCCCcEE-EEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHH--hhhcC
Q 025629 43 FPALTGWLMMSSSIIPTSKVF-LFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGI--ANILP 119 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 119 (250)
+.|+++++..++++++.+++. ++||||||++++.+|.++|++|+++|++++........ ...........+ ...+.
T Consensus 143 ~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~-~~~~~~~~~~ai~~dp~~~ 221 (389)
T PRK06765 143 ILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWT-SVNVLQNWAEAIRLDPNWK 221 (389)
T ss_pred HHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhH-HHHHHHHHHHHHHhCCCCC
Confidence 788899999999999999986 99999999999999999999999999998765432110 011111111111 10011
Q ss_pred CCccc----Ccchhh------------hhhhcccchh-------------------hhhhcccccccCch---hhHHHHH
Q 025629 120 KHKLV----PQKDLA------------EAAFRDLKNR-------------------ELTKYNVIVYKDKP---RLRTALE 161 (250)
Q Consensus 120 ~~~~~----~~~~~~------------~~~~~~~~~~-------------------~~~~~~~~~~~~~~---~~~~~~~ 161 (250)
...+. +...+. ...+.....+ .........+.... .+.....
T Consensus 222 ~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~ 301 (389)
T PRK06765 222 GGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAK 301 (389)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHH
Confidence 00100 000000 0000000000 00000000000000 0111111
Q ss_pred HHHhh------HHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCC--CCcEEEEeCC-CCcccccCCchHHHHHH
Q 025629 162 LLKTT------EGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASS--KDKKCILYKD-AFHSLLEGEPDDMIIRV 232 (250)
Q Consensus 162 ~~~~~------~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~gH~~~~~~~~~~~~~~ 232 (250)
.+... .++.+.+.++++|+|+|+|++|.++|++..+.+.+.++. ++++++++++ +||..++++|++ +
T Consensus 302 a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~----~ 377 (389)
T PRK06765 302 AVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHL----F 377 (389)
T ss_pred HHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHH----H
Confidence 11111 135567889999999999999999999999999888842 3689999985 999999999998 9
Q ss_pred HHHHHHHHhh
Q 025629 233 FADIISWLDD 242 (250)
Q Consensus 233 ~~~i~~fl~~ 242 (250)
.+.|.+|+++
T Consensus 378 ~~~I~~FL~~ 387 (389)
T PRK06765 378 EKKIYEFLNR 387 (389)
T ss_pred HHHHHHHHcc
Confidence 9999999976
No 44
>PLN02511 hydrolase
Probab=99.86 E-value=4.1e-21 Score=145.19 Aligned_cols=220 Identities=14% Similarity=0.122 Sum_probs=116.2
Q ss_pred ccccccchhh-H-HHhhH-Hhhhhhhhhh------------------hchHhHHHHhhccC----CCCcEEEEEeccchH
Q 025629 18 WHHLDTEFSL-W-ITLDL-AFQQVFMATF------------------PALTGWLMMSSSII----PTSKVFLFGQSLGGA 72 (250)
Q Consensus 18 ~hg~~~~~~~-~-~~~~~-~l~~~~~~~~------------------~d~~~~~~~~~~~~----~~~~~~lvGhS~Gg~ 72 (250)
.||++.+... | ...+. .+...|+++. ..+.+|+..+++.+ +..+++++||||||.
T Consensus 106 lHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~ 185 (388)
T PLN02511 106 LPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGAN 185 (388)
T ss_pred ECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHH
Confidence 5888665433 4 33433 4455677771 13344444444444 446899999999999
Q ss_pred HHHHHHhhCCCc--eeeEEEeccccccCCC---CCC---HHHHHHHHHHHhhhcCCCc-cc---Ccchhhhhhhcccchh
Q 025629 73 VALKVHLKQPNA--WSGAILVAPMCKIADD---MVP---PFLVKQILIGIANILPKHK-LV---PQKDLAEAAFRDLKNR 140 (250)
Q Consensus 73 ~a~~~a~~~p~~--v~~lvl~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~ 140 (250)
+++.++.++|++ |.++++++++...... ... ......+...+........ .. +...............
T Consensus 186 i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (388)
T PLN02511 186 ILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVR 265 (388)
T ss_pred HHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHH
Confidence 999999999987 8888888765432100 000 0000001111111110000 00 0000000000000000
Q ss_pred hhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHH-HHHHHHhCCCCcEEEEeCCCCcc
Q 025629 141 ELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVS-KALYEKASSKDKKCILYKDAFHS 219 (250)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~ 219 (250)
+................ +.+.. .+....+.+|++|+|+|+|++|+++|++.. ....+.. +++++++++++||.
T Consensus 266 ~fd~~~t~~~~gf~~~~---~yy~~-~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~--p~~~l~~~~~gGH~ 339 (388)
T PLN02511 266 DFDDGLTRVSFGFKSVD---AYYSN-SSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKAN--PNCLLIVTPSGGHL 339 (388)
T ss_pred HHHHhhhhhcCCCCCHH---HHHHH-cCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcC--CCEEEEECCCccee
Confidence 00000000000001111 11111 123457889999999999999999998765 3455555 89999999999999
Q ss_pred cccCCchHHH--HHHHHHHHHHHhhc
Q 025629 220 LLEGEPDDMI--IRVFADIISWLDDH 243 (250)
Q Consensus 220 ~~~~~~~~~~--~~~~~~i~~fl~~~ 243 (250)
.++|.|+.+. .-+.+.+.+||+..
T Consensus 340 ~~~E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 340 GWVAGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred ccccCCCCCCCCccHHHHHHHHHHHH
Confidence 9999986410 00367777777654
No 45
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.86 E-value=8.9e-22 Score=139.74 Aligned_cols=188 Identities=20% Similarity=0.214 Sum_probs=112.1
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEecccc----ccCCCCCCH-HHHHHHHHHHhh-
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC----KIADDMVPP-FLVKQILIGIAN- 116 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~----~~~~~~~~~-~~~~~~~~~~~~- 116 (250)
..+++.++..+++.++.++++++||||||.+++.+|.++|++|+++|+++++. ......... ............
T Consensus 27 ~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (230)
T PF00561_consen 27 TDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNF 106 (230)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeeccchhhhhHHHHhhhhhhhhHHHhhhcc
Confidence 67888999999999999999999999999999999999999999999999962 111000000 000111110000
Q ss_pred hcCCCcccCcchh-hhhhhcccchhh-hhhcccccccC---chhhHHH---HHHHHhhHHHHHhccCCCCCEEEEeeCCC
Q 025629 117 ILPKHKLVPQKDL-AEAAFRDLKNRE-LTKYNVIVYKD---KPRLRTA---LELLKTTEGIERRLEKVSLPLLILHGEND 188 (250)
Q Consensus 117 ~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D 188 (250)
............. ............ ........+.. ....... ........+....+.++++|+++++|++|
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D 186 (230)
T PF00561_consen 107 LSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDD 186 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTC
T ss_pred ccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhccccccccccccccccccccCCCeEEEEeCCC
Confidence 0000000000000 000000000000 00000000000 0000000 01111222445678889999999999999
Q ss_pred cccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHH
Q 025629 189 TVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADI 236 (250)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i 236 (250)
.++|++....+.+.+ ++.++++++++||..+.+.|++ +.+.|
T Consensus 187 ~~~p~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~~~~~----~~~~i 228 (230)
T PF00561_consen 187 PLVPPESSEQLAKLI--PNSQLVLIEGSGHFAFLEGPDE----FNEII 228 (230)
T ss_dssp SSSHHHHHHHHHHHS--TTEEEEEETTCCSTHHHHSHHH----HHHHH
T ss_pred CCCCHHHHHHHHHhc--CCCEEEECCCCChHHHhcCHHh----hhhhh
Confidence 999999999988888 8899999999999999999998 55554
No 46
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.86 E-value=4e-20 Score=130.68 Aligned_cols=224 Identities=14% Similarity=0.109 Sum_probs=140.4
Q ss_pred hccccccccccchhhHHHhhHHhhhhhhh--h-----------------hhchHhHHHHhhccCC----CCcEEEEEecc
Q 025629 13 ELQGSWHHLDTEFSLWITLDLAFQQVFMA--T-----------------FPALTGWLMMSSSIIP----TSKVFLFGQSL 69 (250)
Q Consensus 13 ~~~g~~hg~~~~~~~~~~~~~~l~~~~~~--~-----------------~~d~~~~~~~~~~~~~----~~~~~lvGhS~ 69 (250)
..+.-.||+-.+...|..+...|++.... + ...+++++..+++... ..+++++||||
T Consensus 53 Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsm 132 (315)
T KOG2382|consen 53 PPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSM 132 (315)
T ss_pred CceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceecccCc
Confidence 34456899999999999999988876321 1 6788888888888774 67999999999
Q ss_pred ch-HHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCc-chhhhhh---hcccchhhhhh
Q 025629 70 GG-AVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQ-KDLAEAA---FRDLKNRELTK 144 (250)
Q Consensus 70 Gg-~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~ 144 (250)
|| .+++..+..+|+.+..+|+++-.+...... ..........+...-......+. ......+ ..+........
T Consensus 133 GG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~--~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~ 210 (315)
T KOG2382|consen 133 GGVKVAMAETLKKPDLIERLIVEDISPGGVGRS--YGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFIL 210 (315)
T ss_pred chHHHHHHHHHhcCcccceeEEEecCCccCCcc--cchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHHH
Confidence 99 778888889999999999988554321111 11112222222221111000000 0110100 01111111111
Q ss_pred cccc------cccCchhhHHHHHHHHh--hHHHHHhc--cCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeC
Q 025629 145 YNVI------VYKDKPRLRTALELLKT--TEGIERRL--EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYK 214 (250)
Q Consensus 145 ~~~~------~~~~~~~~~~~~~~~~~--~~~~~~~~--~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (250)
.+.. .......+....+.+.. ...+...+ .....|||++.|.++..++.+.-..+.+.+ |+++++.++
T Consensus 211 ~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~f--p~~e~~~ld 288 (315)
T KOG2382|consen 211 TNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIF--PNVEVHELD 288 (315)
T ss_pred HhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhc--cchheeecc
Confidence 1110 01111122222222222 11222223 556789999999999999999998999888 899999999
Q ss_pred CCCcccccCCchHHHHHHHHHHHHHHhhcC
Q 025629 215 DAFHSLLEGEPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 215 ~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 244 (250)
++||+++.|+|++ +.+.|.+|+.++.
T Consensus 289 ~aGHwVh~E~P~~----~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 289 EAGHWVHLEKPEE----FIESISEFLEEPE 314 (315)
T ss_pred cCCceeecCCHHH----HHHHHHHHhcccC
Confidence 9999999999999 8999999998753
No 47
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.85 E-value=1.5e-20 Score=138.65 Aligned_cols=177 Identities=14% Similarity=0.165 Sum_probs=99.6
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCC------CHHHHHHHHHHHhh
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMV------PPFLVKQILIGIAN 116 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~------~~~~~~~~~~~~~~ 116 (250)
..++++++..++++++.++++++||||||.+++.++.++|++|+++|++++......... ...........+..
T Consensus 78 ~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (306)
T TIGR01249 78 TWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMD 157 (306)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhh
Confidence 346778888889999889999999999999999999999999999999987653221000 00000000000100
Q ss_pred hcCCCcc--cCcchhhhhhhcccch------hhhh--hc-cccc-----cc--CchhhHHHHHHH-----------HhhH
Q 025629 117 ILPKHKL--VPQKDLAEAAFRDLKN------RELT--KY-NVIV-----YK--DKPRLRTALELL-----------KTTE 167 (250)
Q Consensus 117 ~~~~~~~--~~~~~~~~~~~~~~~~------~~~~--~~-~~~~-----~~--~~~~~~~~~~~~-----------~~~~ 167 (250)
..+.... .....+....+..... .... .. .... +. ..+......... ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (306)
T TIGR01249 158 SIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVEN 237 (306)
T ss_pred hCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCch
Confidence 0000000 0000001111111000 0000 00 0000 00 000011111110 0011
Q ss_pred HHHHhccCC-CCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccc
Q 025629 168 GIERRLEKV-SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLL 221 (250)
Q Consensus 168 ~~~~~~~~i-~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 221 (250)
.....+.++ ++|+|+++|++|.++|.+.++.+.+.+ +++++++++++||.++
T Consensus 238 ~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 290 (306)
T TIGR01249 238 FILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF--PEAELKVTNNAGHSAF 290 (306)
T ss_pred HHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCCCC
Confidence 234456677 699999999999999999999999998 7899999999999986
No 48
>PRK10985 putative hydrolase; Provisional
Probab=99.82 E-value=1.1e-19 Score=134.86 Aligned_cols=188 Identities=15% Similarity=0.119 Sum_probs=102.6
Q ss_pred hHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCc--eeeEEEeccccccCCCCC--CH---HHHHH-HHHHHhhhc-
Q 025629 48 GWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNA--WSGAILVAPMCKIADDMV--PP---FLVKQ-ILIGIANIL- 118 (250)
Q Consensus 48 ~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~~~~~~--~~---~~~~~-~~~~~~~~~- 118 (250)
..+..+.++++..+++++||||||.+++.++.++++. +.++|+++++........ .. ..... +...+....
T Consensus 119 ~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 198 (324)
T PRK10985 119 FFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAA 198 (324)
T ss_pred HHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 3344455556778999999999999999888887644 889999988754321100 00 00000 011111000
Q ss_pred CCCcccCcc-hh-hhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHH
Q 025629 119 PKHKLVPQK-DL-AEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVS 196 (250)
Q Consensus 119 ~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~ 196 (250)
......+.. .. ...........+.......... .+....+.+... +..+.++++++|+++|+|++|++++++..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~---g~~~~~~~y~~~-~~~~~l~~i~~P~lii~g~~D~~~~~~~~ 274 (324)
T PRK10985 199 RKLAAYPGTLPINLAQLKSVRRLREFDDLITARIH---GFADAIDYYRQC-SALPLLNQIRKPTLIIHAKDDPFMTHEVI 274 (324)
T ss_pred HHHHhccccccCCHHHHhcCCcHHHHhhhheeccC---CCCCHHHHHHHC-ChHHHHhCCCCCEEEEecCCCCCCChhhC
Confidence 000000000 00 0000000000000000001111 111122222222 24467789999999999999999998888
Q ss_pred HHHHHHhCCCCcEEEEeCCCCcccccCCc----hHHHHHHHHHHHHHHhhcC
Q 025629 197 KALYEKASSKDKKCILYKDAFHSLLEGEP----DDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~----~~~~~~~~~~i~~fl~~~~ 244 (250)
..+.+.. ++.++++++++||+.+++.. ... .-+.+.+|+....
T Consensus 275 ~~~~~~~--~~~~~~~~~~~GH~~~~~g~~~~~~~w---~~~~~~~~~~~~~ 321 (324)
T PRK10985 275 PKPESLP--PNVEYQLTEHGGHVGFVGGTLLKPQMW---LEQRIPDWLTTYL 321 (324)
T ss_pred hHHHHhC--CCeEEEECCCCCceeeCCCCCCCCCcc---HHHHHHHHHHHhh
Confidence 7776665 78999999999999998742 221 5677788886554
No 49
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.82 E-value=1.2e-20 Score=123.19 Aligned_cols=197 Identities=13% Similarity=0.085 Sum_probs=132.0
Q ss_pred ccccchhhHHHhhHHhhhh--hhhh---------------------hhchHhHHHHhhccCCCCcEEEEEeccchHHHHH
Q 025629 20 HLDTEFSLWITLDLAFQQV--FMAT---------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALK 76 (250)
Q Consensus 20 g~~~~~~~~~~~~~~l~~~--~~~~---------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~ 76 (250)
-+|+...+|.++...+-+. +.++ +..-+++...+++.+..+++.++|+|=||..|+.
T Consensus 51 alGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTali 130 (277)
T KOG2984|consen 51 ALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALI 130 (277)
T ss_pred ccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEE
Confidence 3567778888887766544 2222 4455666678899999999999999999999999
Q ss_pred HHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhh
Q 025629 77 VHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRL 156 (250)
Q Consensus 77 ~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (250)
.|+++++.|.++|+.++......... ..+ .-.+-...+.+..+..-...+....+.. ..
T Consensus 131 vAak~~e~v~rmiiwga~ayvn~~~~--ma~-kgiRdv~kWs~r~R~P~e~~Yg~e~f~~------------------~w 189 (277)
T KOG2984|consen 131 VAAKGKEKVNRMIIWGAAAYVNHLGA--MAF-KGIRDVNKWSARGRQPYEDHYGPETFRT------------------QW 189 (277)
T ss_pred eeccChhhhhhheeecccceecchhH--HHH-hchHHHhhhhhhhcchHHHhcCHHHHHH------------------HH
Confidence 99999999999999998766543211 000 0011111111111000000000000000 00
Q ss_pred HHHHHHH------HhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHH
Q 025629 157 RTALELL------KTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMII 230 (250)
Q Consensus 157 ~~~~~~~------~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 230 (250)
....+.. ....-.+..+.+++||+||++|+.|++++...+..+.... +.+++.+.|+++|.+++..+++
T Consensus 190 a~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~--~~a~~~~~peGkHn~hLrya~e--- 264 (277)
T KOG2984|consen 190 AAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK--SLAKVEIHPEGKHNFHLRYAKE--- 264 (277)
T ss_pred HHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhc--ccceEEEccCCCcceeeechHH---
Confidence 1111111 1112345678999999999999999999998888888777 8899999999999999998988
Q ss_pred HHHHHHHHHHhhc
Q 025629 231 RVFADIISWLDDH 243 (250)
Q Consensus 231 ~~~~~i~~fl~~~ 243 (250)
|+..+.+||+..
T Consensus 265 -Fnklv~dFl~~~ 276 (277)
T KOG2984|consen 265 -FNKLVLDFLKST 276 (277)
T ss_pred -HHHHHHHHHhcc
Confidence 999999999863
No 50
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.82 E-value=7.5e-19 Score=123.01 Aligned_cols=200 Identities=18% Similarity=0.200 Sum_probs=130.0
Q ss_pred hhhhhhhhhhhccccccccccchhhHHHhhHHhhhhhhhhhhchHhHHHHhhccC--CCCcEEEEEeccchHHHHHHHhh
Q 025629 3 METLAHFSLKELQGSWHHLDTEFSLWITLDLAFQQVFMATFPALTGWLMMSSSII--PTSKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 3 ~~~~~~~G~g~~~g~~hg~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
.+.|+.+|+....-.|+|.+.....|.... -.......+.|....+..++++. +.+++.++|||+||.+++.++.+
T Consensus 7 ~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~--~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 7 AQLLASQGYAVLVPNYRGSGGYGKDFHEAG--RGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHTTT-EEEEEE-TTSSSSHHHHHHTT--TTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEEEEcCCCCCccchhHHHhh--hccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 467889999999999999998888885533 11123334677777777776664 45789999999999999999999
Q ss_pred CCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHH
Q 025629 81 QPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTAL 160 (250)
Q Consensus 81 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (250)
+|++++++|..+|.......... ... +...... .+..........
T Consensus 85 ~~~~f~a~v~~~g~~d~~~~~~~---------------------~~~-~~~~~~~-------------~~~~~~~~~~~~ 129 (213)
T PF00326_consen 85 HPDRFKAAVAGAGVSDLFSYYGT---------------------TDI-YTKAEYL-------------EYGDPWDNPEFY 129 (213)
T ss_dssp TCCGSSEEEEESE-SSTTCSBHH---------------------TCC-HHHGHHH-------------HHSSTTTSHHHH
T ss_pred cceeeeeeeccceecchhccccc---------------------ccc-ccccccc-------------ccCccchhhhhh
Confidence 99999999999987653321100 000 0000000 000000000000
Q ss_pred HHHHhhHHHHHhccC--CCCCEEEEeeCCCcccChHHHHHHHHHhCC--CCcEEEEeCCCCcccccCCchHHHHHHHHHH
Q 025629 161 ELLKTTEGIERRLEK--VSLPLLILHGENDTVTDPSVSKALYEKASS--KDKKCILYKDAFHSLLEGEPDDMIIRVFADI 236 (250)
Q Consensus 161 ~~~~~~~~~~~~~~~--i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i 236 (250)
... .....+.+ +++|+|+++|++|..||++.+..+.+.+.. .+++++++|++||.+.. ++. .....+.+
T Consensus 130 ~~~----s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~--~~~-~~~~~~~~ 202 (213)
T PF00326_consen 130 REL----SPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN--PEN-RRDWYERI 202 (213)
T ss_dssp HHH----HHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS--HHH-HHHHHHHH
T ss_pred hhh----ccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC--chh-HHHHHHHH
Confidence 011 11233444 789999999999999999999988887742 45899999999995543 222 23588999
Q ss_pred HHHHhhcCCC
Q 025629 237 ISWLDDHSRS 246 (250)
Q Consensus 237 ~~fl~~~~~~ 246 (250)
.+|++++++.
T Consensus 203 ~~f~~~~l~~ 212 (213)
T PF00326_consen 203 LDFFDKYLKK 212 (213)
T ss_dssp HHHHHHHTT-
T ss_pred HHHHHHHcCC
Confidence 9999998753
No 51
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.81 E-value=8.9e-19 Score=131.46 Aligned_cols=195 Identities=16% Similarity=0.133 Sum_probs=108.0
Q ss_pred hHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccC
Q 025629 46 LTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVP 125 (250)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (250)
+...+..+++..+.++++++||||||.+++.++..+|++|+++|+++++.................. ...........+
T Consensus 122 ~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p 200 (350)
T TIGR01836 122 IDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVD-IDLAVDTMGNIP 200 (350)
T ss_pred HHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccC-HHHHHHhcCCCC
Confidence 3344556666778889999999999999999999999999999999988765432111000000000 000000000000
Q ss_pred cchhh-------------h------hhhcccchhhhhhcccccccC--chhhHHHHHHHHhh---HHH----------HH
Q 025629 126 QKDLA-------------E------AAFRDLKNRELTKYNVIVYKD--KPRLRTALELLKTT---EGI----------ER 171 (250)
Q Consensus 126 ~~~~~-------------~------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~----------~~ 171 (250)
..... . ....+................ ........+..... ..+ ..
T Consensus 201 ~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~ 280 (350)
T TIGR01836 201 GELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKV 280 (350)
T ss_pred HHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEc
Confidence 00000 0 000000000000000000000 00111111111110 000 12
Q ss_pred hccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhc
Q 025629 172 RLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 172 ~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
.+.++++|+++++|++|.++|++.++.+.+.+++.++++++++ +||..++..+. ..+++++.|.+|+.++
T Consensus 281 ~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~-~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 281 DLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGK-AQKEVPPAIGKWLQAR 350 (350)
T ss_pred cHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECch-hHhhhhHHHHHHHHhC
Confidence 3567899999999999999999999999999865567788887 78988776653 2345999999999763
No 52
>PRK11071 esterase YqiA; Provisional
Probab=99.80 E-value=1.9e-18 Score=117.90 Aligned_cols=171 Identities=20% Similarity=0.162 Sum_probs=108.6
Q ss_pred ccccccchhhHHH--hhHHhhh---hhhhhh-------hchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCce
Q 025629 18 WHHLDTEFSLWIT--LDLAFQQ---VFMATF-------PALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAW 85 (250)
Q Consensus 18 ~hg~~~~~~~~~~--~~~~l~~---~~~~~~-------~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 85 (250)
.||++++...|.. +.+.+.+ .++++. ++..+++..++++++.++++++||||||.+++.+|.++|.
T Consensus 7 lHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~~~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~-- 84 (190)
T PRK11071 7 LHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYPADAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML-- 84 (190)
T ss_pred ECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC--
Confidence 5888888888874 3355544 466553 4556777888888888999999999999999999999983
Q ss_pred eeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHh
Q 025629 86 SGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKT 165 (250)
Q Consensus 86 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (250)
++|+++|+.. +..... ....... .+. ... .+. .-.........
T Consensus 85 -~~vl~~~~~~------~~~~~~-------~~~~~~~-~~~-------~~~------------~~~---~~~~~~~d~~~ 127 (190)
T PRK11071 85 -PAVVVNPAVR------PFELLT-------DYLGENE-NPY-------TGQ------------QYV---LESRHIYDLKV 127 (190)
T ss_pred -CEEEECCCCC------HHHHHH-------HhcCCcc-ccc-------CCC------------cEE---EcHHHHHHHHh
Confidence 4688888643 111111 1111000 000 000 000 00011111111
Q ss_pred hHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHh
Q 025629 166 TEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 241 (250)
Q Consensus 166 ~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 241 (250)
. +. ..+. .++|+++++|++|.++|++.+.++++.. +.+++++++|.+- ..++ +.+.|.+|+.
T Consensus 128 ~-~~-~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~~-----~~~~~~ggdH~f~--~~~~----~~~~i~~fl~ 189 (190)
T PRK11071 128 M-QI-DPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAAC-----RQTVEEGGNHAFV--GFER----YFNQIVDFLG 189 (190)
T ss_pred c-CC-ccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHhc-----ceEEECCCCcchh--hHHH----hHHHHHHHhc
Confidence 1 11 1122 6788999999999999999999988753 5668899999883 3344 8899999975
No 53
>PRK05855 short chain dehydrogenase; Validated
Probab=99.80 E-value=7e-19 Score=141.25 Aligned_cols=218 Identities=12% Similarity=0.063 Sum_probs=122.3
Q ss_pred cccccccchhhHHHhhHHhhhhhhhh--------------------hhchHhHHHHhhccCCCCc-EEEEEeccchHHHH
Q 025629 17 SWHHLDTEFSLWITLDLAFQQVFMAT--------------------FPALTGWLMMSSSIIPTSK-VFLFGQSLGGAVAL 75 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~~~~~~--------------------~~d~~~~~~~~~~~~~~~~-~~lvGhS~Gg~~a~ 75 (250)
-.||++.+...|..+.+.|.+.|+++ +.++++++..+++.++..+ ++|+||||||.+++
T Consensus 30 llHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~ 109 (582)
T PRK05855 30 LVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGW 109 (582)
T ss_pred EEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHH
Confidence 36999999999999999998788877 4567778888888887654 99999999999998
Q ss_pred HHHhh--CCCceeeEEEeccccccCC-----CCC---CHHHHHHHHH-HHhhhc---CCCcccCcchhhhhhhcccchhh
Q 025629 76 KVHLK--QPNAWSGAILVAPMCKIAD-----DMV---PPFLVKQILI-GIANIL---PKHKLVPQKDLAEAAFRDLKNRE 141 (250)
Q Consensus 76 ~~a~~--~p~~v~~lvl~~~~~~~~~-----~~~---~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 141 (250)
.++.+ .++++..++.++++..... ... .......... ...... ......+.... ...........
T Consensus 110 ~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 188 (582)
T PRK05855 110 EAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLW-RLGLGRAWPRL 188 (582)
T ss_pred HHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHh-ccchhhHHHHh
Confidence 88766 2445555555543221000 000 0000000000 000000 00000000000 00000000000
Q ss_pred hhhcc---cccccC-------chhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEE
Q 025629 142 LTKYN---VIVYKD-------KPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCI 211 (250)
Q Consensus 142 ~~~~~---~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 211 (250)
..... ...... ............. .........+++|+++|+|++|.++|++..+.+.+.+ ++.+++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~--~~~~~~ 265 (582)
T PRK05855 189 LRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIR-SLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWV--PRLWRR 265 (582)
T ss_pred hhhccCCCcchhhhhhhhccccchHHHHHhhhhh-hhccCccCCccCceEEEEeCCCcccCHHHhccccccC--CcceEE
Confidence 00000 000000 0000000000000 0111234558999999999999999999988888777 678888
Q ss_pred EeCCCCcccccCCchHHHHHHHHHHHHHHhhc
Q 025629 212 LYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 212 ~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
+++ +||+++.|+|++ +.+.|.+|+.+.
T Consensus 266 ~~~-~gH~~~~e~p~~----~~~~i~~fl~~~ 292 (582)
T PRK05855 266 EIK-AGHWLPMSHPQV----LAAAVAEFVDAV 292 (582)
T ss_pred Ecc-CCCcchhhChhH----HHHHHHHHHHhc
Confidence 876 799999999998 889999999764
No 54
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.78 E-value=1.3e-17 Score=126.78 Aligned_cols=150 Identities=19% Similarity=0.242 Sum_probs=93.5
Q ss_pred CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhccc
Q 025629 58 PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDL 137 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (250)
+.+++.++||||||.+++.+|..+|++|+++|+++|+...... ...............+ ... +...
T Consensus 263 d~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~--~~~~~~~~p~~~~~~l-----------a~~-lg~~ 328 (414)
T PRK05077 263 DHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLT--DPKRQQQVPEMYLDVL-----------ASR-LGMH 328 (414)
T ss_pred CcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhc--chhhhhhchHHHHHHH-----------HHH-hCCC
Confidence 4578999999999999999999999999999999987531110 0000000000000000 000 0000
Q ss_pred chhhhhhcccccccCchhhHHHHHHHHhhHHHHHhc-cCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCC
Q 025629 138 KNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRL-EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDA 216 (250)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (250)
. .....+......+.. .....+ .++++|+|+|+|++|+++|++.++.+.+.. ++.+++++|++
T Consensus 329 ~------------~~~~~l~~~l~~~sl--~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~--~~~~l~~i~~~ 392 (414)
T PRK05077 329 D------------ASDEALRVELNRYSL--KVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS--ADGKLLEIPFK 392 (414)
T ss_pred C------------CChHHHHHHhhhccc--hhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC--CCCeEEEccCC
Confidence 0 000000000000000 011112 578999999999999999999999888877 88999999986
Q ss_pred CcccccCCchHHHHHHHHHHHHHHhhcC
Q 025629 217 FHSLLEGEPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 217 gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 244 (250)
++.+.+++ +++.|.+||++++
T Consensus 393 ---~~~e~~~~----~~~~i~~wL~~~l 413 (414)
T PRK05077 393 ---PVYRNFDK----ALQEISDWLEDRL 413 (414)
T ss_pred ---CccCCHHH----HHHHHHHHHHHHh
Confidence 44467777 9999999998865
No 55
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.78 E-value=6.1e-18 Score=122.56 Aligned_cols=178 Identities=14% Similarity=0.125 Sum_probs=97.1
Q ss_pred hchHhHHHHhhccC-CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCc
Q 025629 44 PALTGWLMMSSSII-PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHK 122 (250)
Q Consensus 44 ~d~~~~~~~~~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (250)
.|+.+.+..+.+.. +.++++++||||||.+++.+|.. +++|+++|+++|......... ....... +.......
T Consensus 83 ~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~-~~~~~~~---~~~~~~~~- 156 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQA-ASRIRHY---YLGQLLSA- 156 (274)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccch-HHHHHHH---HHHHHhCh-
Confidence 34444444444443 45789999999999999999865 468999999998754322111 1111111 10000000
Q ss_pred ccCcchhhhhhhcccc-h----hhhhhcccccc--cCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHH
Q 025629 123 LVPQKDLAEAAFRDLK-N----RELTKYNVIVY--KDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSV 195 (250)
Q Consensus 123 ~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~ 195 (250)
........... . ..... ..... ........ ....+....+..+++|+++++|++|...+ +.
T Consensus 157 -----~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~ 224 (274)
T TIGR03100 157 -----DFWRKLLSGEVNLGSSLRGLGD-ALLKARQKGDEVAHG-----GLAERMKAGLERFQGPVLFILSGNDLTAQ-EF 224 (274)
T ss_pred -----HHHHHhcCCCccHHHHHHHHHH-HHHhhhhcCCCcccc-----hHHHHHHHHHHhcCCcEEEEEcCcchhHH-HH
Confidence 00000000000 0 00000 00000 00000000 01224456677789999999999998763 32
Q ss_pred H------HHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 196 S------KALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 196 ~------~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
. ..+.+.+.++++++..+++++|++..+.+. +++.+.|.+||++
T Consensus 225 ~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~---~~v~~~i~~wL~~ 274 (274)
T TIGR03100 225 ADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWR---EWVAARTTEWLRR 274 (274)
T ss_pred HHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHH---HHHHHHHHHHHhC
Confidence 2 445555555789999999999988655442 2499999999963
No 56
>PRK13604 luxD acyl transferase; Provisional
Probab=99.75 E-value=1.5e-16 Score=113.89 Aligned_cols=150 Identities=16% Similarity=0.148 Sum_probs=87.2
Q ss_pred hchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcc
Q 025629 44 PALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKL 123 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (250)
.|+...+..+.+ ....++.|+||||||.+|+..|...+ ++++|+.+|...... .... .+......
T Consensus 93 ~Dl~aaid~lk~-~~~~~I~LiG~SmGgava~~~A~~~~--v~~lI~~sp~~~l~d------~l~~---~~~~~~~~--- 157 (307)
T PRK13604 93 NSLLTVVDWLNT-RGINNLGLIAASLSARIAYEVINEID--LSFLITAVGVVNLRD------TLER---ALGYDYLS--- 157 (307)
T ss_pred HHHHHHHHHHHh-cCCCceEEEEECHHHHHHHHHhcCCC--CCEEEEcCCcccHHH------HHHH---hhhccccc---
Confidence 344333333333 35678999999999999977776443 999999999875321 1111 11100000
Q ss_pred cCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHH-HH----hhHHHHHhccCCCCCEEEEeeCCCcccChHHHHH
Q 025629 124 VPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALEL-LK----TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKA 198 (250)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~ 198 (250)
.+...... ....... ......+... .. ......+.+.++++|+|+|+|++|.+||++.++.
T Consensus 158 ~p~~~lp~----------~~d~~g~----~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~ 223 (307)
T PRK13604 158 LPIDELPE----------DLDFEGH----NLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVID 223 (307)
T ss_pred Cccccccc----------ccccccc----cccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHH
Confidence 00000000 0000000 0000000000 00 0012234566788999999999999999999999
Q ss_pred HHHHhCCCCcEEEEeCCCCccccc
Q 025629 199 LYEKASSKDKKCILYKDAFHSLLE 222 (250)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gH~~~~ 222 (250)
+++.+.+.+++++++||++|.+..
T Consensus 224 l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 224 LLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred HHHHhccCCcEEEEeCCCccccCc
Confidence 999986568999999999999863
No 57
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.73 E-value=7.2e-17 Score=106.22 Aligned_cols=127 Identities=22% Similarity=0.336 Sum_probs=95.1
Q ss_pred ccccccchhhHHHhhHHhhhh-hhhhhhch--------HhHHHHhhcc-----CCCCcEEEEEeccchHHHHHHHhhCCC
Q 025629 18 WHHLDTEFSLWITLDLAFQQV-FMATFPAL--------TGWLMMSSSI-----IPTSKVFLFGQSLGGAVALKVHLKQPN 83 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~~-~~~~~~d~--------~~~~~~~~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 83 (250)
.||.+.+...|..+...|.+. |.++..++ ..++..+++. .+.++++++|||+||.+++.++.+. .
T Consensus 5 ~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~ 83 (145)
T PF12695_consen 5 LHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGADAVERVLADIRAGYPDPDRIILIGHSMGGAIAANLAARN-P 83 (145)
T ss_dssp ECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSHHHHHHHHHHHHHHCTCCEEEEEEETHHHHHHHHHHHHS-T
T ss_pred ECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhHHHHHHHHHHHhhcCCCCcEEEEEEccCcHHHHHHhhhc-c
Confidence 578887888888888888877 55552221 1122222222 3678999999999999999999988 6
Q ss_pred ceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHH
Q 025629 84 AWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELL 163 (250)
Q Consensus 84 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (250)
+++++|++++...
T Consensus 84 ~v~~~v~~~~~~~------------------------------------------------------------------- 96 (145)
T PF12695_consen 84 RVKAVVLLSPYPD------------------------------------------------------------------- 96 (145)
T ss_dssp TESEEEEESESSG-------------------------------------------------------------------
T ss_pred ceeEEEEecCccc-------------------------------------------------------------------
Confidence 7999999999210
Q ss_pred HhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcc
Q 025629 164 KTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHS 219 (250)
Q Consensus 164 ~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 219 (250)
.+.+.+.++|+++++|++|..++++..+.+++.++ .+.+++++++++|+
T Consensus 97 ------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGHF 145 (145)
T ss_dssp ------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-TT
T ss_pred ------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcCc
Confidence 12233455699999999999999999999999995 57999999999995
No 58
>PRK10566 esterase; Provisional
Probab=99.73 E-value=3e-16 Score=112.69 Aligned_cols=180 Identities=17% Similarity=0.277 Sum_probs=107.0
Q ss_pred ccccccchhhHHHhhHHhhhh-hhhhhhchHh-------------------------HH----HHhhcc--CCCCcEEEE
Q 025629 18 WHHLDTEFSLWITLDLAFQQV-FMATFPALTG-------------------------WL----MMSSSI--IPTSKVFLF 65 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~~-~~~~~~d~~~-------------------------~~----~~~~~~--~~~~~~~lv 65 (250)
.||++.+...|..+...|.+. |.++..|+.+ ++ ..+.+. .+.++++++
T Consensus 33 ~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~ 112 (249)
T PRK10566 33 YHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVG 112 (249)
T ss_pred eCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEE
Confidence 588888777788788777764 6666433321 11 112222 345789999
Q ss_pred EeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhc
Q 025629 66 GQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKY 145 (250)
Q Consensus 66 GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (250)
||||||.+++.++.++|+....++++++... ...... .++.... . ...
T Consensus 113 G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~---~~~~~~~--~---------~~~------- 160 (249)
T PRK10566 113 GASMGGMTALGIMARHPWVKCVASLMGSGYF-----------TSLART---LFPPLIP--E---------TAA------- 160 (249)
T ss_pred eecccHHHHHHHHHhCCCeeEEEEeeCcHHH-----------HHHHHH---hcccccc--c---------ccc-------
Confidence 9999999999999998864444444443211 000000 0000000 0 000
Q ss_pred ccccccCchhhHHHHHHHHhhHHHHHhccCC-CCCEEEEeeCCCcccChHHHHHHHHHhCCC----CcEEEEeCCCCccc
Q 025629 146 NVIVYKDKPRLRTALELLKTTEGIERRLEKV-SLPLLILHGENDTVTDPSVSKALYEKASSK----DKKCILYKDAFHSL 220 (250)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~ 220 (250)
............... +....+.++ ++|+|+++|++|.++|++.++.+.+.+... ++++..++++||.+
T Consensus 161 ------~~~~~~~~~~~~~~~-~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~ 233 (249)
T PRK10566 161 ------QQAEFNNIVAPLAEW-EVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRI 233 (249)
T ss_pred ------cHHHHHHHHHHHhhc-ChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCcc
Confidence 000011111111111 222345565 699999999999999999999999887432 36788899999986
Q ss_pred ccCCchHHHHHHHHHHHHHHhhcC
Q 025629 221 LEGEPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 221 ~~~~~~~~~~~~~~~i~~fl~~~~ 244 (250)
. ++ ..+.+.+||++++
T Consensus 234 ~---~~-----~~~~~~~fl~~~~ 249 (249)
T PRK10566 234 T---PE-----ALDAGVAFFRQHL 249 (249)
T ss_pred C---HH-----HHHHHHHHHHhhC
Confidence 3 33 6789999998753
No 59
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.72 E-value=2.5e-16 Score=132.57 Aligned_cols=71 Identities=17% Similarity=0.244 Sum_probs=59.3
Q ss_pred hccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEE-EEeCCCCcccccCCchHHHHHHHHHHHHHHhhcCC
Q 025629 172 RLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKC-ILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSR 245 (250)
Q Consensus 172 ~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 245 (250)
.+.+|++|+|+|+|++|.++|++.++.+.+.+ ++.++ .+++++||+.++--. ...++++..|.+||.++..
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i--~~a~~~~~~~~~GH~g~~~g~-~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPASVRGIRRAA--PNAEVYESLIRAGHFGLVVGS-RAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEEeCCCCCEeeeech-hhhhhhChHHHHHHHHhcc
Confidence 47889999999999999999999999999988 77877 678999999877432 2344599999999998754
No 60
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.70 E-value=6.8e-16 Score=119.45 Aligned_cols=179 Identities=15% Similarity=0.172 Sum_probs=100.1
Q ss_pred chHhHHHHhhccCCCCcEEEEEeccchHHHH----HHHhhC-CCceeeEEEeccccccCCCCCCHHHH-HHHHHHHhhhc
Q 025629 45 ALTGWLMMSSSIIPTSKVFLFGQSLGGAVAL----KVHLKQ-PNAWSGAILVAPMCKIADDMVPPFLV-KQILIGIANIL 118 (250)
Q Consensus 45 d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 118 (250)
.+.+.+..+++..+.++++++||||||.++. .+++.+ |++|++++++++............+. ......+....
T Consensus 247 ~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~ 326 (532)
T TIGR01838 247 GVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQN 326 (532)
T ss_pred HHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHH
Confidence 4555677777788899999999999999862 245555 78899999999887654321110000 00011111111
Q ss_pred CCCcccCcchhhhhhhcccchh-hhhh--------------ccccccc---CchhhHHHHHHHHhh-------------H
Q 025629 119 PKHKLVPQKDLAEAAFRDLKNR-ELTK--------------YNVIVYK---DKPRLRTALELLKTT-------------E 167 (250)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~-~~~~--------------~~~~~~~---~~~~~~~~~~~~~~~-------------~ 167 (250)
......+...+... |...... .... .....+. .........+.++.. .
T Consensus 327 ~~~G~lpg~~m~~~-F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~ 405 (532)
T TIGR01838 327 GGGGYLDGRQMAVT-FSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVC 405 (532)
T ss_pred HhcCCCCHHHHHHH-HHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEEC
Confidence 11111111111111 1000000 0000 0000000 011111111221111 0
Q ss_pred HHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCch
Q 025629 168 GIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPD 226 (250)
Q Consensus 168 ~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 226 (250)
+....+.+|++|++++.|++|.++|++.+..+.+.+ ++.+..+++++||..++++|.
T Consensus 406 g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i--~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 406 GVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALL--GGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC--CCCEEEEECCCCCchHhhCCC
Confidence 122467789999999999999999999999999888 678888999999999887764
No 61
>PRK11460 putative hydrolase; Provisional
Probab=99.69 E-value=9.3e-16 Score=108.21 Aligned_cols=107 Identities=21% Similarity=0.200 Sum_probs=80.2
Q ss_pred CCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccc
Q 025629 59 TSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLK 138 (250)
Q Consensus 59 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (250)
.++++++|||+||.+++.++.++|+.+.++|.+++.... .+.
T Consensus 102 ~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~--------------------------~~~------------ 143 (232)
T PRK11460 102 ASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS--------------------------LPE------------ 143 (232)
T ss_pred hhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc--------------------------ccc------------
Confidence 368999999999999999999999888878776552210 000
Q ss_pred hhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCC--CCcEEEEeCCC
Q 025629 139 NRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASS--KDKKCILYKDA 216 (250)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 216 (250)
....++|+++++|++|+++|.+.++.+.+.+.. .++++++++++
T Consensus 144 ----------------------------------~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~ 189 (232)
T PRK11460 144 ----------------------------------TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDL 189 (232)
T ss_pred ----------------------------------cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCC
Confidence 001258999999999999999999888887742 35788999999
Q ss_pred CcccccCCchHHHHHHHHHHHHHHhhcCC
Q 025629 217 FHSLLEGEPDDMIIRVFADIISWLDDHSR 245 (250)
Q Consensus 217 gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 245 (250)
||.+.. + ..+.+.+||.+.+.
T Consensus 190 gH~i~~---~-----~~~~~~~~l~~~l~ 210 (232)
T PRK11460 190 GHAIDP---R-----LMQFALDRLRYTVP 210 (232)
T ss_pred CCCCCH---H-----HHHHHHHHHHHHcc
Confidence 999842 2 46667777766553
No 62
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.68 E-value=7.9e-16 Score=105.35 Aligned_cols=143 Identities=22% Similarity=0.376 Sum_probs=102.6
Q ss_pred hhchHhHHHHhhccC-CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCC
Q 025629 43 FPALTGWLMMSSSII-PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKH 121 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (250)
.+|.-.....+.+.. +.++++|+|+|+|...++.+|++.| ++++||.+|...... -..+..
T Consensus 112 y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~r----------------v~~~~~ 173 (258)
T KOG1552|consen 112 YADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMR----------------VAFPDT 173 (258)
T ss_pred hhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhh----------------hhccCc
Confidence 344444445566666 4789999999999999999999999 999999999764211 000000
Q ss_pred cccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHH
Q 025629 122 KLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYE 201 (250)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~ 201 (250)
.. . ..+ ..+ ...+.++.|+||+|+++|++|.+++.....++++
T Consensus 174 ~~--~-----~~~-------------d~f-----------------~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye 216 (258)
T KOG1552|consen 174 KT--T-----YCF-------------DAF-----------------PNIEKISKITCPVLIIHGTDDEVVDFSHGKALYE 216 (258)
T ss_pred ce--E-----Eee-------------ccc-----------------cccCcceeccCCEEEEecccCceecccccHHHHH
Confidence 00 0 000 000 1135667789999999999999999999999999
Q ss_pred HhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhcCCC
Q 025629 202 KASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRS 246 (250)
Q Consensus 202 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 246 (250)
..+ ...+..++.++||.-..-.|+ +...+..|+....+.
T Consensus 217 ~~k-~~~epl~v~g~gH~~~~~~~~-----yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 217 RCK-EKVEPLWVKGAGHNDIELYPE-----YIEHLRRFISSVLPS 255 (258)
T ss_pred hcc-ccCCCcEEecCCCcccccCHH-----HHHHHHHHHHHhccc
Confidence 985 335888899999988765554 789999998766543
No 63
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.68 E-value=1.4e-15 Score=110.15 Aligned_cols=217 Identities=22% Similarity=0.299 Sum_probs=116.0
Q ss_pred cccccccchhhHHHhhHHhhhh---hhhhh----------------hchHhHHHHhhccCCCCcEEEEEeccchHHHHHH
Q 025629 17 SWHHLDTEFSLWITLDLAFQQV---FMATF----------------PALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKV 77 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~~---~~~~~----------------~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~ 77 (250)
..||++.+...|......+... |+++. ..++.++..+++.++..+++++||||||.++..+
T Consensus 26 ~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~ 105 (282)
T COG0596 26 LLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALAL 105 (282)
T ss_pred EeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCCcccccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHH
Confidence 3577777777776632222221 34431 1125777888888888889999999999999999
Q ss_pred HhhCCCceeeEEEeccccccCCCCCC---------HHHHHHHHHHH--hhhcCCCcccC-cchhhhh----hhcccchh-
Q 025629 78 HLKQPNAWSGAILVAPMCKIADDMVP---------PFLVKQILIGI--ANILPKHKLVP-QKDLAEA----AFRDLKNR- 140 (250)
Q Consensus 78 a~~~p~~v~~lvl~~~~~~~~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~----~~~~~~~~- 140 (250)
+.++|++++++|++++.......... ........... ........... ....... ........
T Consensus 106 ~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (282)
T COG0596 106 ALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPL 185 (282)
T ss_pred HHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcccccccccccchhcccccccccc
Confidence 99999999999999976541110000 00000000000 00000000000 0000000 00000000
Q ss_pred -hhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCC-CcEEEEeCCCCc
Q 025629 141 -ELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSK-DKKCILYKDAFH 218 (250)
Q Consensus 141 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH 218 (250)
............ ............. ........+++|+++++|++|.+.|......+.+.+ + ..++.+++++||
T Consensus 186 ~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH 261 (282)
T COG0596 186 LGAAAAAFARAAR-ADLAAALLALLDR-DLRAALARITVPTLIIHGEDDPVVPAELARRLAAAL--PNDARLVVIPGAGH 261 (282)
T ss_pred chhHhhhhhhhcc-cccchhhhccccc-ccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhC--CCCceEEEeCCCCC
Confidence 000000000000 0000000000000 223456677899999999999777766656666666 5 489999999999
Q ss_pred ccccCCchHHHHHHHHHHHHHHh
Q 025629 219 SLLEGEPDDMIIRVFADIISWLD 241 (250)
Q Consensus 219 ~~~~~~~~~~~~~~~~~i~~fl~ 241 (250)
..+.++|+. +.+.+.+|+.
T Consensus 262 ~~~~~~p~~----~~~~i~~~~~ 280 (282)
T COG0596 262 FPHLEAPEA----FAAALLAFLE 280 (282)
T ss_pred cchhhcHHH----HHHHHHHHHh
Confidence 999999997 7777777443
No 64
>PLN02872 triacylglycerol lipase
Probab=99.65 E-value=2.5e-15 Score=113.15 Aligned_cols=71 Identities=20% Similarity=0.305 Sum_probs=57.7
Q ss_pred hccCC--CCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccc---cCCchHHHHHHHHHHHHHHhhcCCC
Q 025629 172 RLEKV--SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLL---EGEPDDMIIRVFADIISWLDDHSRS 246 (250)
Q Consensus 172 ~~~~i--~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~---~~~~~~~~~~~~~~i~~fl~~~~~~ 246 (250)
.+.++ ++|+++++|++|.+++++.++.+.+.++ +..+++.++++||..+ .+.|++ +.+.|.+|+++..+.
T Consensus 318 ~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp-~~~~l~~l~~~gH~dfi~~~eape~----V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 318 DLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELP-SKPELLYLENYGHIDFLLSTSAKED----VYNHMIQFFRSLGKS 392 (395)
T ss_pred CcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCC-CccEEEEcCCCCCHHHHhCcchHHH----HHHHHHHHHHHhhhc
Confidence 45666 5799999999999999999999999984 2268889999999643 366766 999999999987654
Q ss_pred C
Q 025629 247 S 247 (250)
Q Consensus 247 ~ 247 (250)
+
T Consensus 393 ~ 393 (395)
T PLN02872 393 S 393 (395)
T ss_pred c
Confidence 4
No 65
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.64 E-value=2.2e-14 Score=100.81 Aligned_cols=173 Identities=18% Similarity=0.122 Sum_probs=105.8
Q ss_pred hhhhhhhhhhhhcccc-ccccccchhhHHHhhHHhh----hhhhhhhhchHhHHHHhhccC--CCCcEEEEEeccchHHH
Q 025629 2 VMETLAHFSLKELQGS-WHHLDTEFSLWITLDLAFQ----QVFMATFPALTGWLMMSSSII--PTSKVFLFGQSLGGAVA 74 (250)
Q Consensus 2 ~~~~~~~~G~g~~~g~-~hg~~~~~~~~~~~~~~l~----~~~~~~~~d~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a 74 (250)
+++.|+..|+....-+ |+|-+............+. .....+..++...+..+.++- ..+++.++|+|+||.++
T Consensus 33 ~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a 112 (218)
T PF01738_consen 33 LADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLA 112 (218)
T ss_dssp HHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHH
T ss_pred HHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHh
Confidence 4677888888877766 4544411111111111111 111223344444444444443 35799999999999999
Q ss_pred HHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCch
Q 025629 75 LKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKP 154 (250)
Q Consensus 75 ~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (250)
+.++.+. +.+++.|..-|.....
T Consensus 113 ~~~a~~~-~~~~a~v~~yg~~~~~-------------------------------------------------------- 135 (218)
T PF01738_consen 113 LLLAARD-PRVDAAVSFYGGSPPP-------------------------------------------------------- 135 (218)
T ss_dssp HHHHCCT-TTSSEEEEES-SSSGG--------------------------------------------------------
T ss_pred hhhhhhc-cccceEEEEcCCCCCC--------------------------------------------------------
Confidence 9999887 5689988877711000
Q ss_pred hhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHh--CCCCcEEEEeCCCCcccccCCch----HH
Q 025629 155 RLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKA--SSKDKKCILYKDAFHSLLEGEPD----DM 228 (250)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~~~~~----~~ 228 (250)
.......++++|+++++|++|+.++.+....+.+.+ .+...++++|++++|.+...... +.
T Consensus 136 -------------~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~a 202 (218)
T PF01738_consen 136 -------------PPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAA 202 (218)
T ss_dssp -------------GHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHH
T ss_pred -------------cchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHH
Confidence 223455678899999999999999999887777776 23678999999999988876544 44
Q ss_pred HHHHHHHHHHHHhhcC
Q 025629 229 IIRVFADIISWLDDHS 244 (250)
Q Consensus 229 ~~~~~~~i~~fl~~~~ 244 (250)
.++.++.+.+||++++
T Consensus 203 a~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 203 AEDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHhcC
Confidence 5667888999998864
No 66
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.63 E-value=4.2e-15 Score=101.18 Aligned_cols=173 Identities=17% Similarity=0.175 Sum_probs=100.3
Q ss_pred hhchHhHHHHhhc-cCCCCcEEEEEeccchHHHHHHHhhCC---CceeeEEEeccccccCCCC--CCHHHHHHHHHHHhh
Q 025629 43 FPALTGWLMMSSS-IIPTSKVFLFGQSLGGAVALKVHLKQP---NAWSGAILVAPMCKIADDM--VPPFLVKQILIGIAN 116 (250)
Q Consensus 43 ~~d~~~~~~~~~~-~~~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~ 116 (250)
++++++.+...+. -...+++.++||||||++|.++|.+.. -.+.++.+.+......... .....-..+...+..
T Consensus 56 i~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~ 135 (244)
T COG3208 56 IESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVD 135 (244)
T ss_pred HHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHH
Confidence 6777777777676 466789999999999999999997632 2256666666433211110 000001111111111
Q ss_pred hcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHH
Q 025629 117 ILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVS 196 (250)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~ 196 (250)
+-.. + ...+.+...... -.+.++..+.....+ .+ ..-..++||+.++.|++|..++.+..
T Consensus 136 lgG~----p-----~e~led~El~~l---------~LPilRAD~~~~e~Y-~~-~~~~pl~~pi~~~~G~~D~~vs~~~~ 195 (244)
T COG3208 136 LGGT----P-----PELLEDPELMAL---------FLPILRADFRALESY-RY-PPPAPLACPIHAFGGEKDHEVSRDEL 195 (244)
T ss_pred hCCC----C-----hHHhcCHHHHHH---------HHHHHHHHHHHhccc-cc-CCCCCcCcceEEeccCcchhccHHHH
Confidence 1100 0 001111100000 001111111111111 00 12246799999999999999999999
Q ss_pred HHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHh
Q 025629 197 KALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 241 (250)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 241 (250)
..+.+..+ ...++.+++ +||++..++.++ +.+.|.+.+.
T Consensus 196 ~~W~~~t~-~~f~l~~fd-GgHFfl~~~~~~----v~~~i~~~l~ 234 (244)
T COG3208 196 GAWREHTK-GDFTLRVFD-GGHFFLNQQREE----VLARLEQHLA 234 (244)
T ss_pred HHHHHhhc-CCceEEEec-CcceehhhhHHH----HHHHHHHHhh
Confidence 98988875 578999998 689999988887 7777777775
No 67
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.62 E-value=1.4e-14 Score=116.07 Aligned_cols=200 Identities=17% Similarity=0.184 Sum_probs=129.2
Q ss_pred hhhhhhhhhhhhccccccccccchhhHHHhhHHhhhhhhhhhhchHhHHHHhhccCC---CCcEEEEEeccchHHHHHHH
Q 025629 2 VMETLAHFSLKELQGSWHHLDTEFSLWITLDLAFQQVFMATFPALTGWLMMSSSIIP---TSKVFLFGQSLGGAVALKVH 78 (250)
Q Consensus 2 ~~~~~~~~G~g~~~g~~hg~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~---~~~~~lvGhS~Gg~~a~~~a 78 (250)
-++.|+..|+......++|.......|..... .+-+....+|+...+. .+.+.+ .+++.++|||+||++++..+
T Consensus 415 ~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~--~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~ 491 (620)
T COG1506 415 EIQVLASAGYAVLAPNYRGSTGYGREFADAIR--GDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAA 491 (620)
T ss_pred hhHHHhcCCeEEEEeCCCCCCccHHHHHHhhh--hccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHH
Confidence 35678888999988999988887777744321 1224445677777777 444443 35899999999999999999
Q ss_pred hhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHH
Q 025629 79 LKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRT 158 (250)
Q Consensus 79 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (250)
.+.| ++++.|...+......... ..... ...........+. .
T Consensus 492 ~~~~-~f~a~~~~~~~~~~~~~~~---------------~~~~~---~~~~~~~~~~~~~---------------~---- 533 (620)
T COG1506 492 TKTP-RFKAAVAVAGGVDWLLYFG---------------ESTEG---LRFDPEENGGGPP---------------E---- 533 (620)
T ss_pred hcCc-hhheEEeccCcchhhhhcc---------------ccchh---hcCCHHHhCCCcc---------------c----
Confidence 9988 6777776666443110000 00000 0000000000000 0
Q ss_pred HHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhC--CCCcEEEEeCCCCcccccCCchHHHHHHHHHH
Q 025629 159 ALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKAS--SKDKKCILYKDAFHSLLEGEPDDMIIRVFADI 236 (250)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i 236 (250)
-.+.+... .......++++|+|+|||++|..||.+++..+.+.+. ..+++++++|+.||.+.. |+. ...+.+.+
T Consensus 534 ~~~~~~~~-sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~--~~~-~~~~~~~~ 609 (620)
T COG1506 534 DREKYEDR-SPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR--PEN-RVKVLKEI 609 (620)
T ss_pred ChHHHHhc-ChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC--chh-HHHHHHHH
Confidence 00001011 2235667899999999999999999999999998874 356899999999999876 222 23488999
Q ss_pred HHHHhhcCCC
Q 025629 237 ISWLDDHSRS 246 (250)
Q Consensus 237 ~~fl~~~~~~ 246 (250)
.+|+++++..
T Consensus 610 ~~~~~~~~~~ 619 (620)
T COG1506 610 LDWFKRHLKQ 619 (620)
T ss_pred HHHHHHHhcC
Confidence 9999988753
No 68
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.60 E-value=9.5e-15 Score=102.31 Aligned_cols=112 Identities=25% Similarity=0.415 Sum_probs=79.2
Q ss_pred CCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcc
Q 025629 57 IPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRD 136 (250)
Q Consensus 57 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (250)
.+.++++|.|.|.||++|+.++.++|+.+.++|.+++........ .
T Consensus 102 i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~------------------------~---------- 147 (216)
T PF02230_consen 102 IDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL------------------------E---------- 147 (216)
T ss_dssp --GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC------------------------H----------
T ss_pred CChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc------------------------c----------
Confidence 356789999999999999999999999999999999865321100 0
Q ss_pred cchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCC--CCcEEEEeC
Q 025629 137 LKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASS--KDKKCILYK 214 (250)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~ 214 (250)
....... ++|+++++|++|+++|.+.++...+.+.. .+++++.++
T Consensus 148 -------------------------------~~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~ 194 (216)
T PF02230_consen 148 -------------------------------DRPEALA--KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYP 194 (216)
T ss_dssp -------------------------------CCHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEET
T ss_pred -------------------------------ccccccC--CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcC
Confidence 0000111 68999999999999999988888777743 368999999
Q ss_pred CCCcccccCCchHHHHHHHHHHHHHHhhc
Q 025629 215 DAFHSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 215 ~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
+.||.+. ++ ..+.+.+||+++
T Consensus 195 g~gH~i~---~~-----~~~~~~~~l~~~ 215 (216)
T PF02230_consen 195 GGGHEIS---PE-----ELRDLREFLEKH 215 (216)
T ss_dssp T-SSS-----HH-----HHHHHHHHHHHH
T ss_pred CCCCCCC---HH-----HHHHHHHHHhhh
Confidence 9999874 23 678899999875
No 69
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.60 E-value=5.7e-14 Score=101.98 Aligned_cols=137 Identities=17% Similarity=0.136 Sum_probs=82.4
Q ss_pred CCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcc
Q 025629 57 IPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRD 136 (250)
Q Consensus 57 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (250)
++.++++++||||||.+++.++.++|+.++++++++|........ .. . ..+. ..+..
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~---~~-~---~~~~----------------~~l~~ 191 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCP---WG-Q---KAFS----------------AYLGA 191 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCc---ch-H---HHHH----------------HHhcc
Confidence 345689999999999999999999999999999999875422100 00 0 0000 00000
Q ss_pred cchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccCh-HHHHHHHHHhC--CCCcEEEEe
Q 025629 137 LKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDP-SVSKALYEKAS--SKDKKCILY 213 (250)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~-~~~~~~~~~~~--~~~~~~~~~ 213 (250)
... . .. ..... ...... ....|+++.+|+.|+.++. .....+.+.+. ...+++.++
T Consensus 192 ~~~-~--------------~~----~~~~~-~~~~~~-~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~ 250 (275)
T TIGR02821 192 DEA-A--------------WR----SYDAS-LLVADG-GRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQ 250 (275)
T ss_pred ccc-c--------------hh----hcchH-HHHhhc-ccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEe
Confidence 000 0 00 00000 111111 2467999999999999997 44444554442 145789999
Q ss_pred CCCCcccccCCchHHHHHHHHHHHHHHhhc
Q 025629 214 KDAFHSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 214 ~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
|+.+|.+..- .. ......+|..++
T Consensus 251 ~g~~H~f~~~--~~----~~~~~~~~~~~~ 274 (275)
T TIGR02821 251 AGYDHSYYFI--AS----FIADHLRHHAER 274 (275)
T ss_pred CCCCccchhH--HH----hHHHHHHHHHhh
Confidence 9999987652 22 455666666654
No 70
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.60 E-value=1.2e-14 Score=96.32 Aligned_cols=200 Identities=12% Similarity=0.137 Sum_probs=111.4
Q ss_pred hhhhhhhhhhccccccccccchhhHHHhhHHhhhhhhhhhhchHhHHHHhhccCCCC-c--EEEEEeccchHHHHHHHhh
Q 025629 4 ETLAHFSLKELQGSWHHLDTEFSLWITLDLAFQQVFMATFPALTGWLMMSSSIIPTS-K--VFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 4 ~~~~~~G~g~~~g~~hg~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~-~--~~lvGhS~Gg~~a~~~a~~ 80 (250)
..|+..|+..-.-+|.|-|.+...+ |.......++|+..+++.+... + -+++|||-||.+++.+|.+
T Consensus 56 ~~~e~~gis~fRfDF~GnGeS~gsf----------~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K 125 (269)
T KOG4667|consen 56 KALEKEGISAFRFDFSGNGESEGSF----------YYGNYNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASK 125 (269)
T ss_pred HHHHhcCceEEEEEecCCCCcCCcc----------ccCcccchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHh
Confidence 3344444444444555555444333 1111334456666666665332 2 3588999999999999999
Q ss_pred CCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHH
Q 025629 81 QPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTAL 160 (250)
Q Consensus 81 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (250)
+++ ++-+|.+++-........ .+.......+... ..+....... ..+..........
T Consensus 126 ~~d-~~~viNcsGRydl~~~I~-----eRlg~~~l~~ike----------~Gfid~~~rk-------G~y~~rvt~eSlm 182 (269)
T KOG4667|consen 126 YHD-IRNVINCSGRYDLKNGIN-----ERLGEDYLERIKE----------QGFIDVGPRK-------GKYGYRVTEESLM 182 (269)
T ss_pred hcC-chheEEcccccchhcchh-----hhhcccHHHHHHh----------CCceecCccc-------CCcCceecHHHHH
Confidence 997 777777776554322100 0000000000000 0000000000 0000001111111
Q ss_pred HHHHhhHHHHHhccCC--CCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHH
Q 025629 161 ELLKTTEGIERRLEKV--SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIIS 238 (250)
Q Consensus 161 ~~~~~~~~~~~~~~~i--~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~ 238 (250)
+.+. .+..+...+| +||||-++|..|.+||.+.+.++++.+ ++.++.++||+.|.....+.+ +......
T Consensus 183 drLn--td~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i--~nH~L~iIEgADHnyt~~q~~-----l~~lgl~ 253 (269)
T KOG4667|consen 183 DRLN--TDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKII--PNHKLEIIEGADHNYTGHQSQ-----LVSLGLE 253 (269)
T ss_pred HHHh--chhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhc--cCCceEEecCCCcCccchhhh-----Hhhhcce
Confidence 2211 1333444445 799999999999999999999999999 789999999999998764443 5666666
Q ss_pred HHhhcCC
Q 025629 239 WLDDHSR 245 (250)
Q Consensus 239 fl~~~~~ 245 (250)
|.+.+..
T Consensus 254 f~k~r~n 260 (269)
T KOG4667|consen 254 FIKTRIN 260 (269)
T ss_pred eEEeeec
Confidence 6655443
No 71
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=8.3e-15 Score=105.56 Aligned_cols=195 Identities=16% Similarity=0.160 Sum_probs=112.5
Q ss_pred hhchHhHHHHhhccCCCCcEE-EEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCC
Q 025629 43 FPALTGWLMMSSSIIPTSKVF-LFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKH 121 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (250)
+.|++..-+.++++++++++. +||-||||+.++.++..||++|+++|.+++...............+........+...
T Consensus 129 i~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~G 208 (368)
T COG2021 129 IRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWNGG 208 (368)
T ss_pred HHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHHHHHHHhCCCccCC
Confidence 557777778899999999988 9999999999999999999999999999986653321100000000000001111000
Q ss_pred cc----cCcchh----------------hhhhhcccc-------------hhhhhhcccccccCchhhHHHHHHHH----
Q 025629 122 KL----VPQKDL----------------AEAAFRDLK-------------NRELTKYNVIVYKDKPRLRTALELLK---- 164 (250)
Q Consensus 122 ~~----~~~~~~----------------~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~---- 164 (250)
.+ .|...+ ....+.... .+....+....+........+..+.+
T Consensus 209 ~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~ 288 (368)
T COG2021 209 DYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDY 288 (368)
T ss_pred CccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHh
Confidence 00 010000 000000000 00000000000000000111111111
Q ss_pred -----hhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeC-CCCcccccCCchHHHHHHHHHHHH
Q 025629 165 -----TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYK-DAFHSLLEGEPDDMIIRVFADIIS 238 (250)
Q Consensus 165 -----~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~~~~~i~~ 238 (250)
...++.+.++++++|+|++.-+.|.++|++..+.+.+.++.... +++++ ..||..++...+. +...|.+
T Consensus 289 ~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~S~~GHDaFL~e~~~----~~~~i~~ 363 (368)
T COG2021 289 HDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREIDSPYGHDAFLVESEA----VGPLIRK 363 (368)
T ss_pred cCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEecCCCCchhhhcchhh----hhHHHHH
Confidence 11234456888999999999999999999999999999953322 65554 6799888877766 7788999
Q ss_pred HHhh
Q 025629 239 WLDD 242 (250)
Q Consensus 239 fl~~ 242 (250)
||+.
T Consensus 364 fL~~ 367 (368)
T COG2021 364 FLAL 367 (368)
T ss_pred Hhhc
Confidence 9874
No 72
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.59 E-value=2.3e-14 Score=100.71 Aligned_cols=188 Identities=17% Similarity=0.199 Sum_probs=115.7
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHh-hhcCCC
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIA-NILPKH 121 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 121 (250)
++++++.+.+++++++.+.++-+|--.|++|..++|..+|++|.|+||+++..... .+..+....+. +.+...
T Consensus 82 md~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~------gw~Ew~~~K~~~~~L~~~ 155 (283)
T PF03096_consen 82 MDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAA------GWMEWFYQKLSSWLLYSY 155 (283)
T ss_dssp HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---------HHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCc------cHHHHHHHHHhccccccc
Confidence 88999999999999999999999999999999999999999999999999976532 22333332222 222211
Q ss_pred ccc--Ccchhhhhhhcccch---hhhh---hcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccCh
Q 025629 122 KLV--PQKDLAEAAFRDLKN---RELT---KYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDP 193 (250)
Q Consensus 122 ~~~--~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~ 193 (250)
... ....+....|..... .+.. ............+..+.+.+..+.++....+...||+|++.|++.+..
T Consensus 156 gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~-- 233 (283)
T PF03096_consen 156 GMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV-- 233 (283)
T ss_dssp CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH--
T ss_pred ccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch--
Confidence 111 111112222222111 1111 111112233345666677777777877778888999999999998874
Q ss_pred HHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 194 SVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
+.+..+..++...+.++..++++|=.+..|+|.. +++.+.=|+..
T Consensus 234 ~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~k----laea~~lFlQG 278 (283)
T PF03096_consen 234 DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGK----LAEAFKLFLQG 278 (283)
T ss_dssp HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHH----HHHHHHHHHHH
T ss_pred hhHHHHHhhcCcccceEEEecccCCcccccCcHH----HHHHHHHHHcc
Confidence 5667888888656789999999999999999998 89999888864
No 73
>PLN02442 S-formylglutathione hydrolase
Probab=99.58 E-value=1.2e-13 Score=100.50 Aligned_cols=136 Identities=23% Similarity=0.285 Sum_probs=84.8
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCc
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHK 122 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (250)
..++...+....+.++.++++|+||||||..|+.++.++|+++++++.+++........ ..... +...
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~----- 193 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCP---WGQKA----FTNY----- 193 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCc---hhhHH----HHHH-----
Confidence 45555566666556677899999999999999999999999999999999875432110 00000 0000
Q ss_pred ccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChH-HHHHHHH
Q 025629 123 LVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPS-VSKALYE 201 (250)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~-~~~~~~~ 201 (250)
+.... .... ..... .....+...++|+++++|++|.+++.. ..+.+.+
T Consensus 194 -----------~g~~~-~~~~------------------~~d~~-~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~ 242 (283)
T PLN02442 194 -----------LGSDK-ADWE------------------EYDAT-ELVSKFNDVSATILIDQGEADKFLKEQLLPENFEE 242 (283)
T ss_pred -----------cCCCh-hhHH------------------HcChh-hhhhhccccCCCEEEEECCCCccccccccHHHHHH
Confidence 00000 0000 00000 122334456899999999999998863 2344444
Q ss_pred HhC--CCCcEEEEeCCCCcccc
Q 025629 202 KAS--SKDKKCILYKDAFHSLL 221 (250)
Q Consensus 202 ~~~--~~~~~~~~~~~~gH~~~ 221 (250)
.+. ..++++.++++.+|..+
T Consensus 243 ~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 243 ACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred HHHHcCCCeEEEEeCCCCccHH
Confidence 331 14589999999999865
No 74
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.58 E-value=5.3e-15 Score=98.17 Aligned_cols=138 Identities=25% Similarity=0.380 Sum_probs=98.9
Q ss_pred CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhccc
Q 025629 58 PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDL 137 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (250)
.-.++++.|-|+||.+|..+|++..+++.++|+-+++...+....+ ....++...+....+.+
T Consensus 147 dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~----------------~v~p~~~k~i~~lc~kn- 209 (300)
T KOG4391|consen 147 DKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIP----------------LVFPFPMKYIPLLCYKN- 209 (300)
T ss_pred CcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhh----------------eeccchhhHHHHHHHHh-
Confidence 4568999999999999999999999999999999988764321110 00000001111111110
Q ss_pred chhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCC
Q 025629 138 KNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAF 217 (250)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 217 (250)
.+ .....+.+-+.|.|++.|..|.++||.+.+.+++.+++..+++.++|++.
T Consensus 210 ------------------------~~----~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gt 261 (300)
T KOG4391|consen 210 ------------------------KW----LSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGT 261 (300)
T ss_pred ------------------------hh----cchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCc
Confidence 00 11123345578999999999999999999999999988889999999999
Q ss_pred cccccCCchHHHHHHHHHHHHHHhhcCC
Q 025629 218 HSLLEGEPDDMIIRVFADIISWLDDHSR 245 (250)
Q Consensus 218 H~~~~~~~~~~~~~~~~~i~~fl~~~~~ 245 (250)
|.-..-... ..+.|.+||.+...
T Consensus 262 HNDT~i~dG-----Yfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 262 HNDTWICDG-----YFQAIEDFLAEVVK 284 (300)
T ss_pred cCceEEecc-----HHHHHHHHHHHhcc
Confidence 987663333 78999999988653
No 75
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.54 E-value=1.4e-13 Score=102.84 Aligned_cols=199 Identities=10% Similarity=0.039 Sum_probs=114.7
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhC-----CCceeeEEEeccccccCCCCCCHHHH------HHHH
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQ-----PNAWSGAILVAPMCKIADDMVPPFLV------KQIL 111 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~------~~~~ 111 (250)
++|+.+.+.+.+++.+.+ ++++|+|+||..++.+++.. |.+++++++++++............+ .++.
T Consensus 152 ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~ 230 (406)
T TIGR01849 152 LEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQ 230 (406)
T ss_pred HHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHH
Confidence 688888888888888766 99999999999977766554 66799999999988765431111111 1111
Q ss_pred HHHhhhcCC----Cc--ccCcchhhhhhhcccchh---hhhhc-----------------cccccc--CchhhHHHHHHH
Q 025629 112 IGIANILPK----HK--LVPQKDLAEAAFRDLKNR---ELTKY-----------------NVIVYK--DKPRLRTALELL 163 (250)
Q Consensus 112 ~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~---~~~~~-----------------~~~~~~--~~~~~~~~~~~~ 163 (250)
..+....+. .. ..|.......+......+ ..... ....+. .......+.+.+
T Consensus 231 ~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v 310 (406)
T TIGR01849 231 HNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTI 310 (406)
T ss_pred HHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHH
Confidence 111111111 00 122211111111000000 00000 000000 000111111211
Q ss_pred HhhH---HH----------HHhccCCC-CCEEEEeeCCCcccChHHHHHHHHHh---CCCCcEEEEeCCCCcccccCCch
Q 025629 164 KTTE---GI----------ERRLEKVS-LPLLILHGENDTVTDPSVSKALYEKA---SSKDKKCILYKDAFHSLLEGEPD 226 (250)
Q Consensus 164 ~~~~---~~----------~~~~~~i~-~Pvl~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~~~~ 226 (250)
.... .+ .-.+++|+ +|+|.+.|++|.++|++++..+.+.+ ++.+++..+.+++||...+.- .
T Consensus 311 ~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G-~ 389 (406)
T TIGR01849 311 DVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSG-S 389 (406)
T ss_pred HHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeC-h
Confidence 1110 00 02566788 99999999999999999999988874 556677888888999888743 4
Q ss_pred HHHHHHHHHHHHHHhhc
Q 025629 227 DMIIRVFADIISWLDDH 243 (250)
Q Consensus 227 ~~~~~~~~~i~~fl~~~ 243 (250)
...++++..|.+||.++
T Consensus 390 r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 390 RFREEIYPLVREFIRRN 406 (406)
T ss_pred hhhhhhchHHHHHHHhC
Confidence 45667999999999763
No 76
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.53 E-value=3.9e-13 Score=93.53 Aligned_cols=188 Identities=13% Similarity=0.097 Sum_probs=123.6
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHH-HHhhhcCCC
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILI-GIANILPKH 121 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 121 (250)
++++++++..++++++.+.++-+|--.|++|..++|..||++|-++||+++...... +..+... .....+...
T Consensus 105 md~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g------wiew~~~K~~s~~l~~~ 178 (326)
T KOG2931|consen 105 MDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG------WIEWAYNKVSSNLLYYY 178 (326)
T ss_pred HHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCch------HHHHHHHHHHHHHHHhh
Confidence 889999999999999999999999999999999999999999999999998764321 1222211 111111111
Q ss_pred c--ccCcchhhhhhhcccch---hhhh---hcccccccCchhhHHHHHHHHhhHHHHHhcc----CCCCCEEEEeeCCCc
Q 025629 122 K--LVPQKDLAEAAFRDLKN---RELT---KYNVIVYKDKPRLRTALELLKTTEGIERRLE----KVSLPLLILHGENDT 189 (250)
Q Consensus 122 ~--~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~Pvl~i~g~~D~ 189 (250)
. ......+....|..... .+.. +.......+...+..+...+....|+..... .++||+|++.|++.+
T Consensus 179 Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp 258 (326)
T KOG2931|consen 179 GMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSP 258 (326)
T ss_pred chhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCc
Confidence 0 00011111111211111 1111 1111222233455566666665555553333 456999999999988
Q ss_pred ccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 190 VTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
.+ +....+..++...+..+..+.++|=.+..++|.. +.+.+.=|+..
T Consensus 259 ~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~k----l~ea~~~FlqG 305 (326)
T KOG2931|consen 259 HV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGK----LAEAFKYFLQG 305 (326)
T ss_pred hh--hhhhhhhcccCcccceEEEEcccCCcccccCchH----HHHHHHHHHcc
Confidence 75 4556677777556788999999999999999998 89999988874
No 77
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.53 E-value=6.8e-13 Score=92.43 Aligned_cols=174 Identities=14% Similarity=0.190 Sum_probs=106.0
Q ss_pred cccccccchhhHHHhhHHhhhh-hhhh-------------------hhchHhHHHHhhccCCCC-cEEEEEeccchHHHH
Q 025629 17 SWHHLDTEFSLWITLDLAFQQV-FMAT-------------------FPALTGWLMMSSSIIPTS-KVFLFGQSLGGAVAL 75 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~~-~~~~-------------------~~d~~~~~~~~~~~~~~~-~~~lvGhS~Gg~~a~ 75 (250)
.+||-+++..++.++.+.|++. .|++ -.+...+..++++.++++ +++.+|||.||-.|+
T Consensus 40 ~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal 119 (297)
T PF06342_consen 40 AFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENAL 119 (297)
T ss_pred EecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHH
Confidence 4799999999999999999887 6666 456667778899998864 678999999999999
Q ss_pred HHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchh
Q 025629 76 KVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPR 155 (250)
Q Consensus 76 ~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (250)
.+|..+| +.++++++|+.........+.........+...++.. ....+....+..... ........
T Consensus 120 ~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~---~~~~i~~~~y~~iG~--------KV~~GeeA 186 (297)
T PF06342_consen 120 QLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRF---IINAIMYFYYRMIGF--------KVSDGEEA 186 (297)
T ss_pred HHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHH---HHHHHHHHHHHHhCe--------eecChHHH
Confidence 9999997 6799999998776654444433333333333333221 011110000100000 00000111
Q ss_pred hHHHHHHHH----hhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHh
Q 025629 156 LRTALELLK----TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKA 203 (250)
Q Consensus 156 ~~~~~~~~~----~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~ 203 (250)
......+.. ......+.+.+-++|+++++|.+|.++..+...+.....
T Consensus 187 ~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f 238 (297)
T PF06342_consen 187 INAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF 238 (297)
T ss_pred HHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh
Confidence 111111110 111233455566799999999999998777666665443
No 78
>PLN00021 chlorophyllase
Probab=99.52 E-value=3.6e-13 Score=98.63 Aligned_cols=169 Identities=18% Similarity=0.208 Sum_probs=107.1
Q ss_pred ccccccchhhHHHhhHHhhhh-hhhhhhch------------------HhHHHHhhc-------cCCCCcEEEEEeccch
Q 025629 18 WHHLDTEFSLWITLDLAFQQV-FMATFPAL------------------TGWLMMSSS-------IIPTSKVFLFGQSLGG 71 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~~-~~~~~~d~------------------~~~~~~~~~-------~~~~~~~~lvGhS~Gg 71 (250)
.||++.+...|..+.+.|.+. |.++..|+ ..++...++ ..+.++++++||||||
T Consensus 58 lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG 137 (313)
T PLN00021 58 LHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGG 137 (313)
T ss_pred ECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcch
Confidence 588877777788888888765 55553221 111111111 1234689999999999
Q ss_pred HHHHHHHhhCCC-----ceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcc
Q 025629 72 AVALKVHLKQPN-----AWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYN 146 (250)
Q Consensus 72 ~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (250)
.+++.+|.++++ +++++|+++|.......... .+. ..
T Consensus 138 ~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~--------------------~p~------il------------ 179 (313)
T PLN00021 138 KTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQT--------------------PPP------VL------------ 179 (313)
T ss_pred HHHHHHHhhccccccccceeeEEeeccccccccccCC--------------------CCc------cc------------
Confidence 999999998874 68999999986542210000 000 00
Q ss_pred cccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCc-----c----cChHH-HHHHHHHhCCCCcEEEEeCCC
Q 025629 147 VIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDT-----V----TDPSV-SKALYEKASSKDKKCILYKDA 216 (250)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~-----~----~~~~~-~~~~~~~~~~~~~~~~~~~~~ 216 (250)
.......++.+|+|++.+..|. . .|... ..++++.++ +.+...+++++
T Consensus 180 ---------------------~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~-~~~~~~~~~~~ 237 (313)
T PLN00021 180 ---------------------TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECK-APAVHFVAKDY 237 (313)
T ss_pred ---------------------ccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcC-CCeeeeeecCC
Confidence 0011122367999999988663 2 22333 367777775 57888999999
Q ss_pred CcccccCCc-------------------hHHHHHHHHHHHHHHhhcCCC
Q 025629 217 FHSLLEGEP-------------------DDMIIRVFADIISWLDDHSRS 246 (250)
Q Consensus 217 gH~~~~~~~-------------------~~~~~~~~~~i~~fl~~~~~~ 246 (250)
||+-+++.. +..++.+...+..||...+..
T Consensus 238 gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~ 286 (313)
T PLN00021 238 GHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEG 286 (313)
T ss_pred CcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 999886554 244555667788898877654
No 79
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.52 E-value=2.1e-13 Score=96.89 Aligned_cols=193 Identities=18% Similarity=0.242 Sum_probs=103.4
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCC--ceeeEEEeccccccCC-------CCCCHHHHHHHHHH
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPN--AWSGAILVAPMCKIAD-------DMVPPFLVKQILIG 113 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~-------~~~~~~~~~~~~~~ 113 (250)
.+|+...+..+....+..++..||.|+||.+...+..+..+ .+.+.+.++.+..... .+...-..+.+...
T Consensus 131 t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~ 210 (345)
T COG0429 131 TEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRN 210 (345)
T ss_pred hhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHH
Confidence 66777777777777888999999999999666666554332 3455555554433211 11101111111111
Q ss_pred H----hhhcCCC-cccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCC
Q 025629 114 I----ANILPKH-KLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGEND 188 (250)
Q Consensus 114 ~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D 188 (250)
+ .+.+... ...+.. .....-+- +...+.+.......-.+....+.++.. .....+.+|.+|+|+|++.+|
T Consensus 211 L~~~~~~kl~~l~~~~p~~-~~~~ik~~---~ti~eFD~~~Tap~~Gf~da~dYYr~a-Ss~~~L~~Ir~PtLii~A~DD 285 (345)
T COG0429 211 LKRNAARKLKELEPSLPGT-VLAAIKRC---RTIREFDDLLTAPLHGFADAEDYYRQA-SSLPLLPKIRKPTLIINAKDD 285 (345)
T ss_pred HHHHHHHHHHhcCcccCcH-HHHHHHhh---chHHhccceeeecccCCCcHHHHHHhc-cccccccccccceEEEecCCC
Confidence 1 1111111 000000 00000000 011111111111111222233333332 334678899999999999999
Q ss_pred cccChHHHHHHHHHhCCCCcEEEEeCCCCcccccC----CchHHHHHHHHHHHHHHhhcC
Q 025629 189 TVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEG----EPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----~~~~~~~~~~~~i~~fl~~~~ 244 (250)
++++++......... +|++.+.+-+.+||..++. +|..+ ..+.+.+|++...
T Consensus 286 P~~~~~~iP~~~~~~-np~v~l~~t~~GGHvGfl~~~~~~~~~W---~~~ri~~~l~~~~ 341 (345)
T COG0429 286 PFMPPEVIPKLQEML-NPNVLLQLTEHGGHVGFLGGKLLHPQMW---LEQRILDWLDPFL 341 (345)
T ss_pred CCCChhhCCcchhcC-CCceEEEeecCCceEEeccCccccchhh---HHHHHHHHHHHHH
Confidence 999998776665533 3899999999999998887 33211 5677888887643
No 80
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.52 E-value=4.7e-13 Score=89.24 Aligned_cols=137 Identities=18% Similarity=0.275 Sum_probs=86.7
Q ss_pred hhHHHh-hHHhhhhhhhh-----hhchHhHHHHhhccCC--CCcEEEEEeccchHHHHHHH-hhCCCceeeEEEeccccc
Q 025629 26 SLWITL-DLAFQQVFMAT-----FPALTGWLMMSSSIIP--TSKVFLFGQSLGGAVALKVH-LKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 26 ~~~~~~-~~~l~~~~~~~-----~~d~~~~~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a-~~~p~~v~~lvl~~~~~~ 96 (250)
..|... ...+....+|. .+++..++..+.+++. .++++|||||+|+..++.++ ...+.+|.+++|++|+..
T Consensus 13 ~HW~~wl~~~l~~~~~V~~~~~~~P~~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 13 DHWQPWLERQLENSVRVEQPDWDNPDLDEWVQALDQAIDAIDEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp TSTHHHHHHHHTTSEEEEEC--TS--HHHHHHHHHHCCHC-TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred cHHHHHHHHhCCCCeEEeccccCCCCHHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCc
Confidence 344333 33444444444 4556666666666543 45799999999999999999 777889999999999753
Q ss_pred cCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCC
Q 025629 97 IADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKV 176 (250)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (250)
..... ..+... .+. . .....+
T Consensus 93 ~~~~~---------------~~~~~~----------~f~--------------------------------~--~p~~~l 113 (171)
T PF06821_consen 93 DDPEP---------------FPPELD----------GFT--------------------------------P--LPRDPL 113 (171)
T ss_dssp GCHHC---------------CTCGGC----------CCT--------------------------------T--SHCCHH
T ss_pred ccccc---------------hhhhcc----------ccc--------------------------------c--Cccccc
Confidence 10000 000000 000 0 011233
Q ss_pred CCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCC
Q 025629 177 SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGE 224 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 224 (250)
.+|.+++.+++|+++|.+.++.+++.+ +++++.++++||+.-.+.
T Consensus 114 ~~~~~viaS~nDp~vp~~~a~~~A~~l---~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 114 PFPSIVIASDNDPYVPFERAQRLAQRL---GAELIILGGGGHFNAASG 158 (171)
T ss_dssp HCCEEEEEETTBSSS-HHHHHHHHHHH---T-EEEEETS-TTSSGGGT
T ss_pred CCCeEEEEcCCCCccCHHHHHHHHHHc---CCCeEECCCCCCcccccC
Confidence 567799999999999999999999998 689999999999876543
No 81
>COG0400 Predicted esterase [General function prediction only]
Probab=99.51 E-value=2.4e-13 Score=92.69 Aligned_cols=123 Identities=24% Similarity=0.355 Sum_probs=94.2
Q ss_pred hhchHhHHHHhhccCCC--CcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCC
Q 025629 43 FPALTGWLMMSSSIIPT--SKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPK 120 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (250)
...+.+.+....++++. ++++++|+|-|+.+++.+..++|+.++++|+++|.......
T Consensus 80 ~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~-------------------- 139 (207)
T COG0400 80 TEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE-------------------- 139 (207)
T ss_pred HHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc--------------------
Confidence 55566666777777765 89999999999999999999999999999999987643210
Q ss_pred CcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHH
Q 025629 121 HKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALY 200 (250)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~ 200 (250)
..-..-..|+++++|+.|+++|...+.++.
T Consensus 140 --------------------------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~ 169 (207)
T COG0400 140 --------------------------------------------------LLPDLAGTPILLSHGTEDPVVPLALAEALA 169 (207)
T ss_pred --------------------------------------------------cccccCCCeEEEeccCcCCccCHHHHHHHH
Confidence 000112479999999999999998887777
Q ss_pred HHhCC--CCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhcC
Q 025629 201 EKASS--KDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 201 ~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 244 (250)
+.+.+ .+++...++ .||.+.. + -.+.+.+|+.+..
T Consensus 170 ~~l~~~g~~v~~~~~~-~GH~i~~---e-----~~~~~~~wl~~~~ 206 (207)
T COG0400 170 EYLTASGADVEVRWHE-GGHEIPP---E-----ELEAARSWLANTL 206 (207)
T ss_pred HHHHHcCCCEEEEEec-CCCcCCH---H-----HHHHHHHHHHhcc
Confidence 76642 567888888 8998753 2 4677778887653
No 82
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.51 E-value=2e-13 Score=97.09 Aligned_cols=195 Identities=17% Similarity=0.184 Sum_probs=63.4
Q ss_pred hhchHhHHHHhhccC----CCCcEEEEEeccchHHHHHHHhhCC-----CceeeEEEeccccccCCCCCCHHH---HHHH
Q 025629 43 FPALTGWLMMSSSII----PTSKVFLFGQSLGGAVALKVHLKQP-----NAWSGAILVAPMCKIADDMVPPFL---VKQI 110 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~---~~~~ 110 (250)
.+|+...+..++... +.++|+|+|||.|+.-+++|+.... ..|+++||.+|............. ....
T Consensus 87 ~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~ 166 (303)
T PF08538_consen 87 VEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEEL 166 (303)
T ss_dssp HHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHH
T ss_pred HHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHH
Confidence 444444444454442 5679999999999999999987642 579999999998765543332221 2222
Q ss_pred HHHHhhhcCCC---cccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCC
Q 025629 111 LIGIANILPKH---KLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGEN 187 (250)
Q Consensus 111 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~ 187 (250)
........... ...+........+..+ ...+..........-..++........+...+..+++|+|++.+++
T Consensus 167 v~~A~~~i~~g~~~~~lp~~~~~~~~~~~P----iTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~ 242 (303)
T PF08538_consen 167 VALAKELIAEGKGDEILPREFTPLVFYDTP----ITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGK 242 (303)
T ss_dssp HHHHHHHHHCT-TT-GG----GGTTT-SS-------HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--
T ss_pred HHHHHHHHHcCCCCceeeccccccccCCCc----ccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCC
Confidence 22222221111 1111111000000000 0111111111111112222222233356678889999999999999
Q ss_pred CcccChHHH-HHHHHHhCC--C----CcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHh
Q 025629 188 DTVTDPSVS-KALYEKASS--K----DKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 241 (250)
Q Consensus 188 D~~~~~~~~-~~~~~~~~~--~----~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 241 (250)
|..+|+..- +.+.+++.. + ...-.++||++|.+--+..++..+.+.+.+..||+
T Consensus 243 DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 243 DEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp TT-----------------------------------------------------------
T ss_pred CceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 999986532 334444321 1 12345899999998765444434457788888874
No 83
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.47 E-value=7.5e-13 Score=91.54 Aligned_cols=208 Identities=13% Similarity=0.156 Sum_probs=112.0
Q ss_pred cccccccchhhHHHhhHHhhhhh--hhh-------------------hhchHhHHHHhhccC---CCCcEEEEEeccchH
Q 025629 17 SWHHLDTEFSLWITLDLAFQQVF--MAT-------------------FPALTGWLMMSSSII---PTSKVFLFGQSLGGA 72 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~~~--~~~-------------------~~d~~~~~~~~~~~~---~~~~~~lvGhS~Gg~ 72 (250)
..||.+.+...|..+...+.... +++ .+.+..|+.++++.+ ...+++||||||||.
T Consensus 79 l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGa 158 (343)
T KOG2564|consen 79 LLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGA 158 (343)
T ss_pred EeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccch
Confidence 36999999999999888877653 332 455666666666554 245799999999999
Q ss_pred HHHHHHhh--CCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcc-cC------cchhhhhhhcccchhhh-
Q 025629 73 VALKVHLK--QPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKL-VP------QKDLAEAAFRDLKNREL- 142 (250)
Q Consensus 73 ~a~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~- 142 (250)
+|...|.. -|. +.|++.++-.-... ......+..++..... +. .........++......
T Consensus 159 Iav~~a~~k~lps-l~Gl~viDVVEgtA---------meAL~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~Rn~~SArVs 228 (343)
T KOG2564|consen 159 IAVHTAASKTLPS-LAGLVVIDVVEGTA---------MEALNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLRNRDSARVS 228 (343)
T ss_pred hhhhhhhhhhchh-hhceEEEEEechHH---------HHHHHHHHHHHhcCCccccchhhHHHHHhccccccccccceEe
Confidence 99988764 465 88999988542110 0111111111111100 00 00000000111000000
Q ss_pred ----hhcc-c-ccccCchhhHHHHHHHHhh-HHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCC
Q 025629 143 ----TKYN-V-IVYKDKPRLRTALELLKTT-EGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKD 215 (250)
Q Consensus 143 ----~~~~-~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (250)
.... . -.|.....+.........+ ..+.+.+-...+|-++|.+..|..-..-.. -+.. ...++.+++.
T Consensus 229 mP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LDkdLti----GQMQ-Gk~Q~~vL~~ 303 (343)
T KOG2564|consen 229 MPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLDKDLTI----GQMQ-GKFQLQVLPL 303 (343)
T ss_pred cchheeeccCCCcEEEEeeccccchhHHHHHhhhhhHhhCCCccceeEEecccccCcceee----eeec-cceeeeeecc
Confidence 0000 0 0111111111111111111 123344556678888888877754211111 1111 4578999999
Q ss_pred CCcccccCCchHHHHHHHHHHHHHHhhc
Q 025629 216 AFHSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 216 ~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
+||+.+.+.|.. +...+..|+.++
T Consensus 304 ~GH~v~ED~P~k----va~~~~~f~~Rn 327 (343)
T KOG2564|consen 304 CGHFVHEDSPHK----VAECLCVFWIRN 327 (343)
T ss_pred cCceeccCCcch----HHHHHHHHHhhh
Confidence 999999999998 889998888765
No 84
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.46 E-value=2.6e-13 Score=94.26 Aligned_cols=163 Identities=19% Similarity=0.219 Sum_probs=77.0
Q ss_pred CCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccc
Q 025629 59 TSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLK 138 (250)
Q Consensus 59 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (250)
.+++.|+|.|.||-+|+.+|+.+| .|+++|.++|............... ..++... .. ........
T Consensus 21 ~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~-------~~lp~~~---~~---~~~~~~~~ 86 (213)
T PF08840_consen 21 PDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSS-------KPLPYLP---FD---ISKFSWNE 86 (213)
T ss_dssp -SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE---------EE-------B----GGG-EE-T
T ss_pred CCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCC-------ccCCcCC---cC---hhhceecC
Confidence 468999999999999999999999 6999999998765432110000000 0000000 00 00000000
Q ss_pred hhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHH-HHHHHHHhCC---C-CcEEEEe
Q 025629 139 NRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSV-SKALYEKASS---K-DKKCILY 213 (250)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~-~~~~~~~~~~---~-~~~~~~~ 213 (250)
............... .......-.+.++++|+|+|.|++|...|... ++.+.+++.. + +.+.+.|
T Consensus 87 ~~~~~~~~~~~~~~~----------~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y 156 (213)
T PF08840_consen 87 PGLLRSRYAFELADD----------KAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSY 156 (213)
T ss_dssp TS-EE-TT-B--TTT----------GGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEE
T ss_pred Ccceehhhhhhcccc----------cccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEc
Confidence 000000000000000 00001112466789999999999999998654 4455555532 2 4788899
Q ss_pred CCCCcccccC-----Cc-------------------hHHHHHHHHHHHHHHhhcCC
Q 025629 214 KDAFHSLLEG-----EP-------------------DDMIIRVFADIISWLDDHSR 245 (250)
Q Consensus 214 ~~~gH~~~~~-----~~-------------------~~~~~~~~~~i~~fl~~~~~ 245 (250)
+++||.+..- .. .....+.++.+.+||++++.
T Consensus 157 ~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 157 PGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp TTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999986321 10 11234578889999998874
No 85
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.44 E-value=6.4e-12 Score=92.27 Aligned_cols=162 Identities=20% Similarity=0.201 Sum_probs=92.7
Q ss_pred hhchHhHHHHhhc--cCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCC
Q 025629 43 FPALTGWLMMSSS--IIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPK 120 (250)
Q Consensus 43 ~~d~~~~~~~~~~--~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (250)
+.|....+..+.. ..+.+++.+.|.|+||.+++.+|+..| +|++++...|+..-. ......-..
T Consensus 156 ~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~---------~~~~~~~~~---- 221 (320)
T PF05448_consen 156 YLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDF---------RRALELRAD---- 221 (320)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSH---------HHHHHHT------
T ss_pred HHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccch---------hhhhhcCCc----
Confidence 4444444443332 234579999999999999999999887 699999998865311 000000000
Q ss_pred CcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHH
Q 025629 121 HKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALY 200 (250)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~ 200 (250)
..+...+ ..+++. .-.........++.+... |.....++|++|+++-.|-.|.++||...-..+
T Consensus 222 --~~~y~~~-~~~~~~------------~d~~~~~~~~v~~~L~Y~-D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~y 285 (320)
T PF05448_consen 222 --EGPYPEI-RRYFRW------------RDPHHEREPEVFETLSYF-DAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAY 285 (320)
T ss_dssp --STTTHHH-HHHHHH------------HSCTHCHHHHHHHHHHTT--HHHHGGG--SEEEEEEETT-SSS-HHHHHHHH
T ss_pred --cccHHHH-HHHHhc------------cCCCcccHHHHHHHHhhh-hHHHHHHHcCCCEEEEEecCCCCCCchhHHHHH
Confidence 0000000 001100 000011122233333333 667788899999999999999999999999999
Q ss_pred HHhCCCCcEEEEeCCCCcccccCCchHHHHHH-HHHHHHHHhhc
Q 025629 201 EKASSKDKKCILYKDAFHSLLEGEPDDMIIRV-FADIISWLDDH 243 (250)
Q Consensus 201 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~-~~~i~~fl~~~ 243 (250)
+.++ ..+++.++|..||.... + . .+...+||.++
T Consensus 286 N~i~-~~K~l~vyp~~~He~~~----~----~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 286 NAIP-GPKELVVYPEYGHEYGP----E----FQEDKQLNFLKEH 320 (320)
T ss_dssp CC---SSEEEEEETT--SSTTH----H----HHHHHHHHHHHH-
T ss_pred hccC-CCeeEEeccCcCCCchh----h----HHHHHHHHHHhcC
Confidence 9996 35899999999997643 2 3 67788888764
No 86
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.43 E-value=1.2e-12 Score=85.54 Aligned_cols=153 Identities=17% Similarity=0.155 Sum_probs=105.9
Q ss_pred hhhhhhhhhhhhccccccccccchhhHHHhhHHhhhhhhhhhhchHhHHHHhhccCCCCcE-EEEEeccchHHHHHHHhh
Q 025629 2 VMETLAHFSLKELQGSWHHLDTEFSLWITLDLAFQQVFMATFPALTGWLMMSSSIIPTSKV-FLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 2 ~~~~~~~~G~g~~~g~~hg~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~-~lvGhS~Gg~~a~~~a~~ 80 (250)
+...|...|+....-.|.|.|.+--.|+ .+..-.+|....+.-+.++.+..+. .|.|.|+|++|++.+|.+
T Consensus 52 la~~l~~~G~atlRfNfRgVG~S~G~fD--------~GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r 123 (210)
T COG2945 52 LARALVKRGFATLRFNFRGVGRSQGEFD--------NGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMR 123 (210)
T ss_pred HHHHHHhCCceEEeecccccccccCccc--------CCcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHh
Confidence 3455566666666666666666655552 2233345555555556666666555 688999999999999999
Q ss_pred CCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHH
Q 025629 81 QPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTAL 160 (250)
Q Consensus 81 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (250)
.|+ ....+.+.|....
T Consensus 124 ~~e-~~~~is~~p~~~~--------------------------------------------------------------- 139 (210)
T COG2945 124 RPE-ILVFISILPPINA--------------------------------------------------------------- 139 (210)
T ss_pred ccc-ccceeeccCCCCc---------------------------------------------------------------
Confidence 886 5555555554320
Q ss_pred HHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHH
Q 025629 161 ELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWL 240 (250)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 240 (250)
.-...+....+|.++|+|+.|.+++.+...++++.. ..+++++++++|+++-. -.. +.+.|.+|+
T Consensus 140 -------~dfs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~---~~~~i~i~~a~HFF~gK-l~~----l~~~i~~~l 204 (210)
T COG2945 140 -------YDFSFLAPCPSPGLVIQGDADDVVDLVAVLKWQESI---KITVITIPGADHFFHGK-LIE----LRDTIADFL 204 (210)
T ss_pred -------hhhhhccCCCCCceeEecChhhhhcHHHHHHhhcCC---CCceEEecCCCceeccc-HHH----HHHHHHHHh
Confidence 001233455789999999999999988887777764 57888999999999873 344 888999998
Q ss_pred h
Q 025629 241 D 241 (250)
Q Consensus 241 ~ 241 (250)
.
T Consensus 205 ~ 205 (210)
T COG2945 205 E 205 (210)
T ss_pred h
Confidence 4
No 87
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.43 E-value=1.8e-11 Score=82.58 Aligned_cols=143 Identities=20% Similarity=0.246 Sum_probs=82.1
Q ss_pred chHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCccc
Q 025629 45 ALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLV 124 (250)
Q Consensus 45 d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (250)
.....+..++++...+.+.|+|.||||+.|..+|.+++ +++ |+++|...... .+ ...+......
T Consensus 44 ~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~------~l-------~~~iG~~~~~ 107 (187)
T PF05728_consen 44 EAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYE------LL-------QDYIGEQTNP 107 (187)
T ss_pred HHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHH------HH-------HHhhCccccC
Confidence 33456677777777777999999999999999999986 444 99999875321 11 1111110000
Q ss_pred CcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhC
Q 025629 125 PQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKAS 204 (250)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~ 204 (250)
.. ...+. ... ........+......-..+++++.++.|.+++.+.+. +..
T Consensus 108 ~~----~e~~~------~~~----------------~~~~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~---~~~- 157 (187)
T PF05728_consen 108 YT----GESYE------LTE----------------EHIEELKALEVPYPTNPERYLVLLQTGDEVLDYREAV---AKY- 157 (187)
T ss_pred CC----Cccce------ech----------------HhhhhcceEeccccCCCccEEEEEecCCcccCHHHHH---HHh-
Confidence 00 00000 000 0000000000011223579999999999999985543 333
Q ss_pred CCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHH
Q 025629 205 SKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWL 240 (250)
Q Consensus 205 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 240 (250)
.++..++.+|++|.+.- -++ ....|.+|+
T Consensus 158 -~~~~~~i~~ggdH~f~~--f~~----~l~~i~~f~ 186 (187)
T PF05728_consen 158 -RGCAQIIEEGGDHSFQD--FEE----YLPQIIAFL 186 (187)
T ss_pred -cCceEEEEeCCCCCCcc--HHH----HHHHHHHhh
Confidence 44556677888998752 333 677888886
No 88
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.42 E-value=1.3e-11 Score=91.06 Aligned_cols=177 Identities=14% Similarity=0.178 Sum_probs=99.3
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCC---ceeeEEEeccccccCC--CC---CCHHHHHH-HHHH
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPN---AWSGAILVAPMCKIAD--DM---VPPFLVKQ-ILIG 113 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~--~~---~~~~~~~~-~~~~ 113 (250)
.+|+...+..+.+.++..++..+|.||||.+.+.|..+..+ .+.++.+++|+..... .. ........ +...
T Consensus 181 t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~ 260 (409)
T KOG1838|consen 181 TEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLN 260 (409)
T ss_pred HHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHh
Confidence 78888888888999999999999999999999999887543 4566666677653211 00 01111111 1111
Q ss_pred HhhhcCCCc--ccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCccc
Q 025629 114 IANILPKHK--LVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVT 191 (250)
Q Consensus 114 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~ 191 (250)
+.+.....+ ............+....++........... +....+.+... .....+.+|++|+|+|++.+|+++
T Consensus 261 l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~g---f~~~deYY~~a-Ss~~~v~~I~VP~L~ina~DDPv~ 336 (409)
T KOG1838|consen 261 LKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFG---FKSVDEYYKKA-SSSNYVDKIKVPLLCINAADDPVV 336 (409)
T ss_pred HHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcC---CCcHHHHHhhc-chhhhcccccccEEEEecCCCCCC
Confidence 111111110 000111111111111112221111111111 11222222222 445788899999999999999999
Q ss_pred ChHHHHHHHHHhCCCCcEEEEeCCCCcccccCC
Q 025629 192 DPSVSKALYEKASSKDKKCILYKDAFHSLLEGE 224 (250)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 224 (250)
|++..- ..+...+|++-+.+-..+||..++|.
T Consensus 337 p~~~ip-~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 337 PEEAIP-IDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred CcccCC-HHHHhcCCcEEEEEeCCCceeeeecc
Confidence 986432 22222338888999999999999886
No 89
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.40 E-value=1.3e-11 Score=95.22 Aligned_cols=172 Identities=12% Similarity=0.103 Sum_probs=92.3
Q ss_pred hHhHHHHhhccCCCCcEEEEEeccchHHHHH----HHhhCCC-ceeeEEEeccccccCCCCCCHHHH-HHHHHHHhhhcC
Q 025629 46 LTGWLMMSSSIIPTSKVFLFGQSLGGAVALK----VHLKQPN-AWSGAILVAPMCKIADDMVPPFLV-KQILIGIANILP 119 (250)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~----~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 119 (250)
+...+..+.+..+.+++.++|+|+||.++.. +++++++ +|++++++.+............+. ............
T Consensus 274 i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~ 353 (560)
T TIGR01839 274 LKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSY 353 (560)
T ss_pred HHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHH
Confidence 3344455556667899999999999999997 7888886 899999999887755322111110 000101010000
Q ss_pred CCcccCcchhhhhh------------------hcc-cchhhhhhccccccc-CchhhHHHHHHHHhhHHH----------
Q 025629 120 KHKLVPQKDLAEAA------------------FRD-LKNRELTKYNVIVYK-DKPRLRTALELLKTTEGI---------- 169 (250)
Q Consensus 120 ~~~~~~~~~~~~~~------------------~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------- 169 (250)
.....+...+...+ ..+ +...+......+... .......+..++... .+
T Consensus 354 ~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N-~L~~pG~l~v~G 432 (560)
T TIGR01839 354 QAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSN-PLTRPDALEVCG 432 (560)
T ss_pred hcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcC-CCCCCCCEEECC
Confidence 11111111111000 000 000000000000000 001112222222111 11
Q ss_pred -HHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCccc
Q 025629 170 -ERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSL 220 (250)
Q Consensus 170 -~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 220 (250)
.-.+.+|+||++++.|+.|.++|++.+....+.+++ +++++..+ +||..
T Consensus 433 ~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~~-gGHIg 482 (560)
T TIGR01839 433 TPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLSN-SGHIQ 482 (560)
T ss_pred EEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEecC-CCccc
Confidence 125678999999999999999999999999999875 57777775 77854
No 90
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.36 E-value=3.3e-11 Score=85.54 Aligned_cols=195 Identities=15% Similarity=0.129 Sum_probs=103.8
Q ss_pred ccccccchhhHHHhhHHhhhh-hhhh----------------hhchHhHHHHhhcc-CCCCcEEEEEeccchHHHHHHHh
Q 025629 18 WHHLDTEFSLWITLDLAFQQV-FMAT----------------FPALTGWLMMSSSI-IPTSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~~-~~~~----------------~~d~~~~~~~~~~~-~~~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
+|+.+++...|..+.+.+... +.++ +++++....+.+.. .+..+++|+|||+||.+|..+|.
T Consensus 6 ~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~ 85 (229)
T PF00975_consen 6 FPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMAR 85 (229)
T ss_dssp ESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHH
T ss_pred EcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHH
Confidence 577777788888888888875 4443 45555555444444 44459999999999999999997
Q ss_pred h---CCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhh
Q 025629 80 K---QPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRL 156 (250)
Q Consensus 80 ~---~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (250)
+ ....+..++++++...... .. ..........+. ..+.......... .......
T Consensus 86 ~Le~~G~~v~~l~liD~~~p~~~-~~-~~~~~~~~~~~~---------------~~~~~~~~~~~~~------~~~~~~~ 142 (229)
T PF00975_consen 86 QLEEAGEEVSRLILIDSPPPSIK-ER-PRSREPSDEQFI---------------EELRRIGGTPDAS------LEDEELL 142 (229)
T ss_dssp HHHHTT-SESEEEEESCSSTTCH-SC-HHHHHCHHHHHH---------------HHHHHHCHHHHHH------CHHHHHH
T ss_pred HHHHhhhccCceEEecCCCCCcc-cc-hhhhhhhHHHHH---------------HHHHHhcCCchhh------hcCHHHH
Confidence 5 3456999999997543221 11 111000000000 0000000000000 0000011
Q ss_pred HHHHHHHHhhHHHHHh--ccCC---CCCEEEEeeCCCcccChH---HHHHHHHHhCCCCcEEEEeCCCCcccccCCchHH
Q 025629 157 RTALELLKTTEGIERR--LEKV---SLPLLILHGENDTVTDPS---VSKALYEKASSKDKKCILYKDAFHSLLEGEPDDM 228 (250)
Q Consensus 157 ~~~~~~~~~~~~~~~~--~~~i---~~Pvl~i~g~~D~~~~~~---~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 228 (250)
......+......... ...+ .+|.++.....|+..... ....+.+... ...+++.++ ++|+.++. +..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~-~~~~~~~v~-G~H~~~l~-~~~- 218 (229)
T PF00975_consen 143 ARLLRALRDDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTS-GDVEVHDVP-GDHFSMLK-PHV- 218 (229)
T ss_dssp HHHHHHHHHHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBS-SSEEEEEES-SETTGHHS-TTH-
T ss_pred HHHHHHHHHHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcC-CCcEEEEEc-CCCcEecc-hHH-
Confidence 1111111111111111 1222 457888889999887666 2333555553 457888888 68999987 332
Q ss_pred HHHHHHHHHHHH
Q 025629 229 IIRVFADIISWL 240 (250)
Q Consensus 229 ~~~~~~~i~~fl 240 (250)
.++.+.|.+||
T Consensus 219 -~~i~~~I~~~~ 229 (229)
T PF00975_consen 219 -AEIAEKIAEWL 229 (229)
T ss_dssp -HHHHHHHHHHH
T ss_pred -HHHHHHHhccC
Confidence 33788887775
No 91
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.33 E-value=7e-11 Score=83.29 Aligned_cols=116 Identities=15% Similarity=0.196 Sum_probs=91.5
Q ss_pred CCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccc
Q 025629 59 TSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLK 138 (250)
Q Consensus 59 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (250)
.+++.++|.||||.+++.++.+.| .+++.|..-+......
T Consensus 111 ~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~--------------------------------------- 150 (236)
T COG0412 111 PKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD--------------------------------------- 150 (236)
T ss_pred CceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc---------------------------------------
Confidence 567999999999999999999888 6888888777543111
Q ss_pred hhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCC--CcEEEEeCCC
Q 025629 139 NRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSK--DKKCILYKDA 216 (250)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 216 (250)
.....++++|+|+..|+.|..+|.+....+.+.+... ++++.+++++
T Consensus 151 -------------------------------~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga 199 (236)
T COG0412 151 -------------------------------TADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGA 199 (236)
T ss_pred -------------------------------ccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCC
Confidence 0114578899999999999999999888888777433 6889999999
Q ss_pred CcccccC-------CchHHHHHHHHHHHHHHhhcCC
Q 025629 217 FHSLLEG-------EPDDMIIRVFADIISWLDDHSR 245 (250)
Q Consensus 217 gH~~~~~-------~~~~~~~~~~~~i~~fl~~~~~ 245 (250)
.|.++.+ ......+.-++.+.+||++.+.
T Consensus 200 ~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 200 GHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred ccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 9988843 3455566788999999998764
No 92
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.32 E-value=1.4e-10 Score=84.03 Aligned_cols=170 Identities=11% Similarity=-0.016 Sum_probs=86.9
Q ss_pred hccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHH--HHHHHhhhcCCCcccCcchhhh
Q 025629 54 SSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQ--ILIGIANILPKHKLVPQKDLAE 131 (250)
Q Consensus 54 ~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 131 (250)
+++.+..++.+.|.||||.+|...|...|..+..+-++++...... + ....+.. ....+...+....+... ..
T Consensus 169 l~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~v-F-t~Gvls~~i~W~~L~~q~~~~~~~~~---~~ 243 (348)
T PF09752_consen 169 LEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVV-F-TEGVLSNSINWDALEKQFEDTVYEEE---IS 243 (348)
T ss_pred HHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcc-h-hhhhhhcCCCHHHHHHHhcccchhhh---hc
Confidence 3344888999999999999999999999987776666665432111 0 0000000 00001111100000000 00
Q ss_pred hhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCC-----CCEEEEeeCCCcccChHHHHHHHHHhCCC
Q 025629 132 AAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVS-----LPLLILHGENDTVTDPSVSKALYEKASSK 206 (250)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~ 206 (250)
............ ..................+ +....+.+.. -.+.++.+++|.++|.+....+.+.. |
T Consensus 244 ~~~~~~~~~~~~-~~~~~~~~~Ea~~~m~~~m----d~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~W--P 316 (348)
T PF09752_consen 244 DIPAQNKSLPLD-SMEERRRDREALRFMRGVM----DSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIW--P 316 (348)
T ss_pred ccccCcccccch-hhccccchHHHHHHHHHHH----HhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhC--C
Confidence 000000000000 0000001111112222222 2222333333 34888999999999999888999999 8
Q ss_pred CcEEEEeCCCCcc-cccCCchHHHHHHHHHHHHHH
Q 025629 207 DKKCILYKDAFHS-LLEGEPDDMIIRVFADIISWL 240 (250)
Q Consensus 207 ~~~~~~~~~~gH~-~~~~~~~~~~~~~~~~i~~fl 240 (250)
++++..+++ ||. .++-+.+. +-++|.+=+
T Consensus 317 GsEvR~l~g-GHVsA~L~~q~~----fR~AI~Daf 346 (348)
T PF09752_consen 317 GSEVRYLPG-GHVSAYLLHQEA----FRQAIYDAF 346 (348)
T ss_pred CCeEEEecC-CcEEEeeechHH----HHHHHHHHh
Confidence 999999985 994 44456666 555555443
No 93
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.30 E-value=3.6e-11 Score=77.79 Aligned_cols=137 Identities=19% Similarity=0.193 Sum_probs=90.0
Q ss_pred hhchHhHHHHhhccCC--CCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCC
Q 025629 43 FPALTGWLMMSSSIIP--TSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPK 120 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (250)
.+.+.+++.++-++.. .++++||+||+|+..+++++.+....|+|+.+++|+........+..
T Consensus 40 ~P~~~dWi~~l~~~v~a~~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~--------------- 104 (181)
T COG3545 40 APVLDDWIARLEKEVNAAEGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKH--------------- 104 (181)
T ss_pred CCCHHHHHHHHHHHHhccCCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccchhh---------------
Confidence 4445555554444332 45699999999999999999887778999999999753221000000
Q ss_pred CcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHH
Q 025629 121 HKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALY 200 (250)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~ 200 (250)
...+ + .....++.-|.+++...+|++++.+.++.+.
T Consensus 105 ----------~~tf---------------------------------~-~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a 140 (181)
T COG3545 105 ----------LMTF---------------------------------D-PIPREPLPFPSVVVASRNDPYVSYEHAEDLA 140 (181)
T ss_pred ----------cccc---------------------------------C-CCccccCCCceeEEEecCCCCCCHHHHHHHH
Confidence 0000 0 0112344579999999999999999999999
Q ss_pred HHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 201 EKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 201 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
+.+ ...++...++||..-.+.-.. ..+....+.+|+.+
T Consensus 141 ~~w---gs~lv~~g~~GHiN~~sG~g~-wpeg~~~l~~~~s~ 178 (181)
T COG3545 141 NAW---GSALVDVGEGGHINAESGFGP-WPEGYALLAQLLSR 178 (181)
T ss_pred Hhc---cHhheecccccccchhhcCCC-cHHHHHHHHHHhhh
Confidence 998 467888888999754322111 11256666666654
No 94
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.28 E-value=1.9e-11 Score=85.47 Aligned_cols=38 Identities=21% Similarity=0.379 Sum_probs=34.1
Q ss_pred CCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 59 TSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 59 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
.++++|+|||+||.+++.++.++|+++.+++.+++...
T Consensus 94 ~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 94 PNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred hhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 35899999999999999999999999999998887653
No 95
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.25 E-value=4.1e-10 Score=82.98 Aligned_cols=195 Identities=12% Similarity=0.096 Sum_probs=106.5
Q ss_pred hchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCc-eeeEEEeccccccCCCCC-----CHHHHHHHHHHHhhh
Q 025629 44 PALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNA-WSGAILVAPMCKIADDMV-----PPFLVKQILIGIANI 117 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 117 (250)
+.+...+..+++..+.+++.++|+|.||.++..+++.++.+ |++++++.+..+...... ...........+
T Consensus 165 e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i--- 241 (445)
T COG3243 165 EGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADI--- 241 (445)
T ss_pred HHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhh---
Confidence 45556667777888889999999999999999999988877 999999987766544221 111111111110
Q ss_pred cCCCcccCcchhh-----------------hhhhcccchhhhhhcccccccCchhhHHHHHHHHhh---HHH--------
Q 025629 118 LPKHKLVPQKDLA-----------------EAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTT---EGI-------- 169 (250)
Q Consensus 118 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------- 169 (250)
......+...+. ................+..-....+-......++.. ..+
T Consensus 242 -~~~g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~ 320 (445)
T COG3243 242 -VQKGILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVS 320 (445)
T ss_pred -hhccCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEEC
Confidence 000011111111 111111111000000000000111111111222111 011
Q ss_pred --HHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCccccc-CCchHHHHHHHH----HHHHHHhh
Q 025629 170 --ERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE-GEPDDMIIRVFA----DIISWLDD 242 (250)
Q Consensus 170 --~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~----~i~~fl~~ 242 (250)
.-.+.+|+||++++.|++|.++|++......+.+++ +++++.. ++||.... ..|.....+.+. .+..|+.+
T Consensus 321 G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g-~~~f~l~-~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~ 398 (445)
T COG3243 321 GTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGG-EVTFVLS-RSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSG 398 (445)
T ss_pred CEEechhhcccceEEEeecccccCCHHHHHHHHHhcCC-ceEEEEe-cCceEEEEeCCcchhhhhcCCCCcchHHHHHHh
Confidence 125778999999999999999999999988888842 4566555 48996543 344443333444 67778765
Q ss_pred cC
Q 025629 243 HS 244 (250)
Q Consensus 243 ~~ 244 (250)
..
T Consensus 399 a~ 400 (445)
T COG3243 399 AK 400 (445)
T ss_pred hc
Confidence 43
No 96
>PRK10115 protease 2; Provisional
Probab=99.25 E-value=5.3e-10 Score=90.75 Aligned_cols=180 Identities=15% Similarity=0.100 Sum_probs=112.1
Q ss_pred hhhhhhhhhhccccccccccchhhHHHhhHHhhhhhhhhhhchHhHHHHhhccC--CCCcEEEEEeccchHHHHHHHhhC
Q 025629 4 ETLAHFSLKELQGSWHHLDTEFSLWITLDLAFQQVFMATFPALTGWLMMSSSII--PTSKVFLFGQSLGGAVALKVHLKQ 81 (250)
Q Consensus 4 ~~~~~~G~g~~~g~~hg~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~ 81 (250)
..|+.+|+.--.-.++|-+.-...|........+ ...+.|+.+....++++- ..+++.+.|.|.||+++..++.++
T Consensus 468 ~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k--~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~ 545 (686)
T PRK10115 468 LSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKK--KNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQR 545 (686)
T ss_pred HHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcC--CCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcC
Confidence 3456666666666677777777777553322221 133677777777777653 357899999999999999999999
Q ss_pred CCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHH
Q 025629 82 PNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALE 161 (250)
Q Consensus 82 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (250)
|++++++|...|......... . ... +........+.++. -.....
T Consensus 546 Pdlf~A~v~~vp~~D~~~~~~------------~---~~~---p~~~~~~~e~G~p~-----------------~~~~~~ 590 (686)
T PRK10115 546 PELFHGVIAQVPFVDVVTTML------------D---ESI---PLTTGEFEEWGNPQ-----------------DPQYYE 590 (686)
T ss_pred hhheeEEEecCCchhHhhhcc------------c---CCC---CCChhHHHHhCCCC-----------------CHHHHH
Confidence 999999999999875332100 0 000 00000000011111 011111
Q ss_pred HHHhhHHHHHhccCCCCC-EEEEeeCCCcccChHHHHHHHHHhCC--CCcEEEEe---CCCCcccc
Q 025629 162 LLKTTEGIERRLEKVSLP-LLILHGENDTVTDPSVSKALYEKASS--KDKKCILY---KDAFHSLL 221 (250)
Q Consensus 162 ~~~~~~~~~~~~~~i~~P-vl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~gH~~~ 221 (250)
.+... .....+.+++.| +|+++|.+|.-||+..+.++..++.. .+.+++++ +++||...
T Consensus 591 ~l~~~-SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~ 655 (686)
T PRK10115 591 YMKSY-SPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK 655 (686)
T ss_pred HHHHc-CchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC
Confidence 21111 223455677889 56779999999999999988888742 34567777 89999943
No 97
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.25 E-value=5.4e-11 Score=88.49 Aligned_cols=190 Identities=19% Similarity=0.198 Sum_probs=96.3
Q ss_pred hhhhhhhhhccccccccccchhhHHHhhHHhhhhhhhhhhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCc
Q 025629 5 TLAHFSLKELQGSWHHLDTEFSLWITLDLAFQQVFMATFPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNA 84 (250)
Q Consensus 5 ~~~~~G~g~~~g~~hg~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 84 (250)
.++.+|+..-.-+..|.|.+. .|. +..++......+.+++.. +...+..+|.++|.|+||++|.++|..+++|
T Consensus 213 ~l~~rGiA~LtvDmPG~G~s~-~~~-----l~~D~~~l~~aVLd~L~~-~p~VD~~RV~~~G~SfGGy~AvRlA~le~~R 285 (411)
T PF06500_consen 213 YLAPRGIAMLTVDMPGQGESP-KWP-----LTQDSSRLHQAVLDYLAS-RPWVDHTRVGAWGFSFGGYYAVRLAALEDPR 285 (411)
T ss_dssp CCHHCT-EEEEE--TTSGGGT-TT------S-S-CCHHHHHHHHHHHH-STTEEEEEEEEEEETHHHHHHHHHHHHTTTT
T ss_pred HHHhCCCEEEEEccCCCcccc-cCC-----CCcCHHHHHHHHHHHHhc-CCccChhheEEEEeccchHHHHHHHHhcccc
Confidence 345566665555555655542 221 222332233333344433 2334567999999999999999999999999
Q ss_pred eeeEEEeccccccCCCCCCHHHHHH----HHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHH
Q 025629 85 WSGAILVAPMCKIADDMVPPFLVKQ----ILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTAL 160 (250)
Q Consensus 85 v~~lvl~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (250)
++++|..+++....-. ....... ....+...+.. .........
T Consensus 286 lkavV~~Ga~vh~~ft--~~~~~~~~P~my~d~LA~rlG~-------------------------------~~~~~~~l~ 332 (411)
T PF06500_consen 286 LKAVVALGAPVHHFFT--DPEWQQRVPDMYLDVLASRLGM-------------------------------AAVSDESLR 332 (411)
T ss_dssp -SEEEEES---SCGGH---HHHHTTS-HHHHHHHHHHCT--------------------------------SCE-HHHHH
T ss_pred eeeEeeeCchHhhhhc--cHHHHhcCCHHHHHHHHHHhCC-------------------------------ccCCHHHHH
Confidence 9999999997542110 0000000 00000000000 000011111
Q ss_pred HHHHhhHH-HHHhc--cCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCC-cccccCCchHHHHHHHHHH
Q 025629 161 ELLKTTEG-IERRL--EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAF-HSLLEGEPDDMIIRVFADI 236 (250)
Q Consensus 161 ~~~~~~~~-~~~~~--~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~~~~~i 236 (250)
..+....- ....+ .+.++|+|.+.|++|+++|.+..+-+...- .+.+...++... |..+ +. -...+
T Consensus 333 ~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s--~~gk~~~~~~~~~~~gy---~~-----al~~~ 402 (411)
T PF06500_consen 333 GELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESS--TDGKALRIPSKPLHMGY---PQ-----ALDEI 402 (411)
T ss_dssp HHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTB--TT-EEEEE-SSSHHHHH---HH-----HHHHH
T ss_pred HHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcC--CCCceeecCCCccccch---HH-----HHHHH
Confidence 11111100 11233 567899999999999999999988877765 567777787554 4432 22 67889
Q ss_pred HHHHhhcC
Q 025629 237 ISWLDDHS 244 (250)
Q Consensus 237 ~~fl~~~~ 244 (250)
.+||++++
T Consensus 403 ~~Wl~~~l 410 (411)
T PF06500_consen 403 YKWLEDKL 410 (411)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99998764
No 98
>PRK10162 acetyl esterase; Provisional
Probab=99.24 E-value=6.7e-10 Score=82.45 Aligned_cols=66 Identities=21% Similarity=0.277 Sum_probs=46.8
Q ss_pred CCEEEEeeCCCcccChHHHHHHHHHhC--CCCcEEEEeCCCCcccccCC-chHHHHHHHHHHHHHHhhcCC
Q 025629 178 LPLLILHGENDTVTDPSVSKALYEKAS--SKDKKCILYKDAFHSLLEGE-PDDMIIRVFADIISWLDDHSR 245 (250)
Q Consensus 178 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~i~~fl~~~~~ 245 (250)
.|+++++|+.|++.+ ....+.+++. ...++++++++..|.+..-. ......+..+.+.+||.+.+.
T Consensus 249 Pp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 249 PPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred CCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 699999999999874 4455555552 24589999999999765432 222334578888899987653
No 99
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.22 E-value=2.9e-11 Score=81.52 Aligned_cols=225 Identities=10% Similarity=0.055 Sum_probs=116.8
Q ss_pred hhhhhhhhhhhccccccccccchhhHHHhhHHhhhhhhhh-hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhC
Q 025629 3 METLAHFSLKELQGSWHHLDTEFSLWITLDLAFQQVFMAT-FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQ 81 (250)
Q Consensus 3 ~~~~~~~G~g~~~g~~hg~~~~~~~~~~~~~~l~~~~~~~-~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 81 (250)
++.++..|+-...++|.|.+.+...- ...+.-+|... ..|++..+..+.+.++..+.+.||||+||.+.-.+. ++
T Consensus 50 A~~a~~~Gf~Vlt~dyRG~g~S~p~~---~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~ 125 (281)
T COG4757 50 AAAAAKAGFEVLTFDYRGIGQSRPAS---LSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QH 125 (281)
T ss_pred HHHhhccCceEEEEecccccCCCccc---cccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cC
Confidence 45566677777777777777654321 00001112222 567888888888888889999999999998766554 44
Q ss_pred CCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccch-hhhhhcccccccCchhhHHHH
Q 025629 82 PNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKN-RELTKYNVIVYKDKPRLRTAL 160 (250)
Q Consensus 82 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (250)
| ++.+....+....... +.................+.....+. .+...++..... ..-...+...+...+.. .
T Consensus 126 ~-k~~a~~vfG~gagwsg-~m~~~~~l~~~~l~~lv~p~lt~w~g-~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y---~ 199 (281)
T COG4757 126 P-KYAAFAVFGSGAGWSG-WMGLRERLGAVLLWNLVGPPLTFWKG-YMPKDLLGLGSDLPGTVMRDWARWCRHPRY---Y 199 (281)
T ss_pred c-ccceeeEecccccccc-chhhhhcccceeeccccccchhhccc-cCcHhhcCCCccCcchHHHHHHHHhcCccc---c
Confidence 5 4555555544433211 11110000000000000110111100 111111111100 00000000000000000 0
Q ss_pred HHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCC----CCcccccCCchHHHHHHHHHH
Q 025629 161 ELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKD----AFHSLLEGEPDDMIIRVFADI 236 (250)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~----~gH~~~~~~~~~~~~~~~~~i 236 (250)
..........+.++.+++|+..+...+|+.+|+...+.+.+...+...+...++. -||+-..-++-| .+.+++
T Consensus 200 fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~E---alwk~~ 276 (281)
T COG4757 200 FDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFE---ALWKEM 276 (281)
T ss_pred ccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchH---HHHHHH
Confidence 0000111345677788999999999999999999999999888444455555554 499988877733 278888
Q ss_pred HHHH
Q 025629 237 ISWL 240 (250)
Q Consensus 237 ~~fl 240 (250)
.+|+
T Consensus 277 L~w~ 280 (281)
T COG4757 277 LGWF 280 (281)
T ss_pred HHhh
Confidence 8876
No 100
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.21 E-value=3.2e-09 Score=67.64 Aligned_cols=133 Identities=17% Similarity=0.181 Sum_probs=92.8
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCc
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHK 122 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (250)
-+.+...+.++.+.+...++++-|+||||-++.+++..-...|+++++++-+...+...
T Consensus 72 ~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKP--------------------- 130 (213)
T COG3571 72 NPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKP--------------------- 130 (213)
T ss_pred CHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCc---------------------
Confidence 34455556677777777899999999999999999987655699999998655432210
Q ss_pred ccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHH
Q 025629 123 LVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEK 202 (250)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~ 202 (250)
.. --.+.+..+++|+||.+|+.|++-..+.. ...
T Consensus 131 ---e~----------------------------------------~Rt~HL~gl~tPtli~qGtrD~fGtr~~V---a~y 164 (213)
T COG3571 131 ---EQ----------------------------------------LRTEHLTGLKTPTLITQGTRDEFGTRDEV---AGY 164 (213)
T ss_pred ---cc----------------------------------------chhhhccCCCCCeEEeecccccccCHHHH---Hhh
Confidence 00 11256778899999999999998776655 222
Q ss_pred hCCCCcEEEEeCCCCcccccCC------chHHHHHHHHHHHHHHhh
Q 025629 203 ASSKDKKCILYKDAFHSLLEGE------PDDMIIRVFADIISWLDD 242 (250)
Q Consensus 203 ~~~~~~~~~~~~~~gH~~~~~~------~~~~~~~~~~~i~~fl~~ 242 (250)
.-++..+++.++++.|.+--.+ -+.-.....+.|..|..+
T Consensus 165 ~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 165 ALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred hcCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 2337799999999999763211 122223356677777765
No 101
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.20 E-value=4.1e-10 Score=79.68 Aligned_cols=177 Identities=16% Similarity=0.089 Sum_probs=102.1
Q ss_pred cccccccchhhHHHhhHHhh-hhhhhh---------------------------------------hhchHhHH----HH
Q 025629 17 SWHHLDTEFSLWITLDLAFQ-QVFMAT---------------------------------------FPALTGWL----MM 52 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~-~~~~~~---------------------------------------~~d~~~~~----~~ 52 (250)
..||++++...+...+..+. +....- ....+.++ ..
T Consensus 16 fihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~~vl~~ 95 (255)
T PF06028_consen 16 FIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLKKVLKY 95 (255)
T ss_dssp EE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHHHHHHH
T ss_pred EECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHHHHHHH
Confidence 35888888888888888876 332111 22334444 44
Q ss_pred hhccCCCCcEEEEEeccchHHHHHHHhhCCC-----ceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcc
Q 025629 53 SSSIIPTSKVFLFGQSLGGAVALKVHLKQPN-----AWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQK 127 (250)
Q Consensus 53 ~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (250)
+.++...+++.+|||||||..++.|+..+.. ++.++|.++++...........
T Consensus 96 L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~---------------------- 153 (255)
T PF06028_consen 96 LKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQ---------------------- 153 (255)
T ss_dssp HHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-T----------------------
T ss_pred HHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccc----------------------
Confidence 5556688999999999999999999887532 6899999998765332110000
Q ss_pred hhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHh-ccCC--CCCEEEEeeC------CCcccChHHHHH
Q 025629 128 DLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERR-LEKV--SLPLLILHGE------NDTVTDPSVSKA 198 (250)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i--~~Pvl~i~g~------~D~~~~~~~~~~ 198 (250)
... ...... .......+. ++... -..+ ++.||-|.|. .|..||...+..
T Consensus 154 ~~~-~~~~~g--------------p~~~~~~y~-------~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~s 211 (255)
T PF06028_consen 154 NQN-DLNKNG--------------PKSMTPMYQ-------DLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLS 211 (255)
T ss_dssp TTT--CSTT---------------BSS--HHHH-------HHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCT
T ss_pred hhh-hhcccC--------------CcccCHHHH-------HHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHH
Confidence 000 000000 000001111 11122 1222 5789999998 799999988887
Q ss_pred HHHHhCC--CCcEEEEeCC--CCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 199 LYEKASS--KDKKCILYKD--AFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 199 ~~~~~~~--~~~~~~~~~~--~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
+...+.. ...+..++.| +.|.-..+.+. +.+.|.+||-+
T Consensus 212 l~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~-----V~~~I~~FLw~ 254 (255)
T PF06028_consen 212 LRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQ-----VDKLIIQFLWG 254 (255)
T ss_dssp HHHHCTTTSSEEEEEEEESGGGSCCGGGCCHH-----HHHHHHHHHCT
T ss_pred HHHHhhcccCceEEEEEECCCCccccCCCCHH-----HHHHHHHHhcC
Confidence 7777643 2345556654 68988887765 88999999843
No 102
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.19 E-value=2.5e-10 Score=76.74 Aligned_cols=131 Identities=18% Similarity=0.295 Sum_probs=97.5
Q ss_pred hhhhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCC
Q 025629 41 ATFPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPK 120 (250)
Q Consensus 41 ~~~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (250)
.+..++...+..+..+-..+++.++|.+|||.++..+....| .+.+.|..-|...
T Consensus 101 ~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~------------------------ 155 (242)
T KOG3043|consen 101 KIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV------------------------ 155 (242)
T ss_pred cchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC------------------------
Confidence 335666666666665555789999999999999999888888 5777777666431
Q ss_pred CcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHH
Q 025629 121 HKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALY 200 (250)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~ 200 (250)
+ .+...++++|+|++.|+.|.++|++....+.
T Consensus 156 -----------------------------------------------d-~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~e 187 (242)
T KOG3043|consen 156 -----------------------------------------------D-SADIANVKAPILFLFAELDEDVPPKDVKAWE 187 (242)
T ss_pred -----------------------------------------------C-hhHHhcCCCCEEEEeecccccCCHHHHHHHH
Confidence 1 2345577899999999999999999988888
Q ss_pred HHhCCC---CcEEEEeCCCCccccc-----CCc--hHHHHHHHHHHHHHHhhcC
Q 025629 201 EKASSK---DKKCILYKDAFHSLLE-----GEP--DDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 201 ~~~~~~---~~~~~~~~~~gH~~~~-----~~~--~~~~~~~~~~i~~fl~~~~ 244 (250)
+.+... ..++.++++-+|.++. +.| ....++..+.+..|++..+
T Consensus 188 e~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 188 EKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred HHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 887422 2479999999998774 233 2344557788889988754
No 103
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.09 E-value=6.2e-09 Score=74.99 Aligned_cols=51 Identities=25% Similarity=0.345 Sum_probs=41.0
Q ss_pred HHHHhhccC--CCCcEEEEEeccchHHHHHHHhhCC---CceeeEEEeccccccCC
Q 025629 49 WLMMSSSII--PTSKVFLFGQSLGGAVALKVHLKQP---NAWSGAILVAPMCKIAD 99 (250)
Q Consensus 49 ~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~ 99 (250)
.+++++... +..+++|+|||.|++++++++.+.+ .+|.+++++-|......
T Consensus 71 ~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia 126 (266)
T PF10230_consen 71 FIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIA 126 (266)
T ss_pred HHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccccc
Confidence 344444443 5678999999999999999999999 78999999999865443
No 104
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.09 E-value=1.1e-09 Score=75.85 Aligned_cols=163 Identities=17% Similarity=0.169 Sum_probs=101.0
Q ss_pred hhhhhhchHhHHHHhh--ccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhh
Q 025629 39 FMATFPALTGWLMMSS--SIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIAN 116 (250)
Q Consensus 39 ~~~~~~d~~~~~~~~~--~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (250)
|+.++.|....+..+. .....+++.+.|.|.||.+++.+++..| +|++++..-|...--....
T Consensus 153 yr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r~i-------------- 217 (321)
T COG3458 153 YRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPRAI-------------- 217 (321)
T ss_pred EeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchhhe--------------
Confidence 3444556555554443 3345689999999999999999998877 7999999888754221100
Q ss_pred hcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHH
Q 025629 117 ILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVS 196 (250)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~ 196 (250)
...... .......+++... +.-...+.-+... |......++++|+|+..|--|++|||...
T Consensus 218 --~~~~~~-~ydei~~y~k~h~---------------~~e~~v~~TL~yf-D~~n~A~RiK~pvL~svgL~D~vcpPstq 278 (321)
T COG3458 218 --ELATEG-PYDEIQTYFKRHD---------------PKEAEVFETLSYF-DIVNLAARIKVPVLMSVGLMDPVCPPSTQ 278 (321)
T ss_pred --eecccC-cHHHHHHHHHhcC---------------chHHHHHHHHhhh-hhhhHHHhhccceEEeecccCCCCCChhh
Confidence 000000 0000011111110 0011122222222 56677788999999999999999999999
Q ss_pred HHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhc
Q 025629 197 KALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
-..++.+. ..+++.+++.-+|.-.- .- ..+.+..|++..
T Consensus 279 FA~yN~l~-~~K~i~iy~~~aHe~~p---~~----~~~~~~~~l~~l 317 (321)
T COG3458 279 FAAYNALT-TSKTIEIYPYFAHEGGP---GF----QSRQQVHFLKIL 317 (321)
T ss_pred HHHhhccc-CCceEEEeeccccccCc---ch----hHHHHHHHHHhh
Confidence 99999986 45788888877786543 32 345567777653
No 105
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.03 E-value=2e-08 Score=82.41 Aligned_cols=73 Identities=18% Similarity=0.237 Sum_probs=52.7
Q ss_pred HHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCC--CCcEEEEeCCCCcccccCC-chHHHHHHHHHHHHHHhhcCC
Q 025629 169 IERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASS--KDKKCILYKDAFHSLLEGE-PDDMIIRVFADIISWLDDHSR 245 (250)
Q Consensus 169 ~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~i~~fl~~~~~ 245 (250)
+...+.+|++|+|+++|.+|..++++.+.++++.+.. ...++.+.+ ++|...... +.+ +.+.+.+|+.+.+.
T Consensus 447 ~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~~~~~~~d----~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 447 YLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYPNNWQSID----FRDTMNAWFTHKLL 521 (767)
T ss_pred HhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCCCchhHHH----HHHHHHHHHHhccc
Confidence 3456778999999999999999999888888887742 345665554 678654322 233 67788888887764
Q ss_pred C
Q 025629 246 S 246 (250)
Q Consensus 246 ~ 246 (250)
.
T Consensus 522 G 522 (767)
T PRK05371 522 G 522 (767)
T ss_pred c
Confidence 3
No 106
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.01 E-value=9.8e-10 Score=78.65 Aligned_cols=43 Identities=21% Similarity=0.208 Sum_probs=37.9
Q ss_pred hccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 54 SSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 54 ~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
+++.+..+++|+||||||.+++.+|.++|++++++|+++|...
T Consensus 93 L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 93 LIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred HHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 3445678999999999999999999999999999999998754
No 107
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.98 E-value=1.4e-09 Score=82.59 Aligned_cols=79 Identities=18% Similarity=0.078 Sum_probs=55.7
Q ss_pred ccccccch--hhHHH-hhHHhh---hhhhhhhh------------------chHhHHHHhhcc------CCCCcEEEEEe
Q 025629 18 WHHLDTEF--SLWIT-LDLAFQ---QVFMATFP------------------ALTGWLMMSSSI------IPTSKVFLFGQ 67 (250)
Q Consensus 18 ~hg~~~~~--~~~~~-~~~~l~---~~~~~~~~------------------d~~~~~~~~~~~------~~~~~~~lvGh 67 (250)
.||++.+. ..|.. +...|. ..++|+.. .+++++..+++. ++.++++|+||
T Consensus 47 IHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGH 126 (442)
T TIGR03230 47 IHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGY 126 (442)
T ss_pred ECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEE
Confidence 49987643 45765 444442 24666622 222334444443 24689999999
Q ss_pred ccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 68 SLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 68 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
||||.+|..++.+.|++|.++++++|+..
T Consensus 127 SLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 127 SLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 99999999999999999999999999754
No 108
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.98 E-value=9.5e-09 Score=77.19 Aligned_cols=236 Identities=12% Similarity=0.061 Sum_probs=125.8
Q ss_pred hhhhhhhhhhccccccccccchhhHHHhhHHhhh-----hhhh-hhhchHhHHHHhhccCCCCcEEEEEeccchHHHHHH
Q 025629 4 ETLAHFSLKELQGSWHHLDTEFSLWITLDLAFQQ-----VFMA-TFPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKV 77 (250)
Q Consensus 4 ~~~~~~G~g~~~g~~hg~~~~~~~~~~~~~~l~~-----~~~~-~~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~ 77 (250)
=.|+..|+...-|...|..-+...= ..-+.-.. .++- -..|+++.+..+++..+.++++.+|||.|+.+...+
T Consensus 100 f~LadaGYDVWLgN~RGn~ySr~h~-~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~ 178 (403)
T KOG2624|consen 100 FLLADAGYDVWLGNNRGNTYSRKHK-KLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVM 178 (403)
T ss_pred HHHHHcCCceeeecCcCcccchhhc-ccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheeh
Confidence 3577777777777777632221110 00000011 1111 167888889999998899999999999999999999
Q ss_pred HhhCCC---ceeeEEEeccccccCCCCCCHHH-HHHH---HHHHhhhcCCCcccCcchhhhhhhcc----c-chhh----
Q 025629 78 HLKQPN---AWSGAILVAPMCKIADDMVPPFL-VKQI---LIGIANILPKHKLVPQKDLAEAAFRD----L-KNRE---- 141 (250)
Q Consensus 78 a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~---- 141 (250)
++..|+ +|+.+++++|.........+... .... ...+...+....+.+...+.+..... . ....
T Consensus 179 lS~~p~~~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~ 258 (403)
T KOG2624|consen 179 LSERPEYNKKIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSN 258 (403)
T ss_pred hcccchhhhhhheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHH
Confidence 988875 79999999998854422111111 0100 01233333333333332211111110 0 0000
Q ss_pred ------------hhhccc-cccc---CchhhHHH---HHHHHhh-------------------HHHHHhccCCCCCEEEE
Q 025629 142 ------------LTKYNV-IVYK---DKPRLRTA---LELLKTT-------------------EGIERRLEKVSLPLLIL 183 (250)
Q Consensus 142 ------------~~~~~~-~~~~---~~~~~~~~---~~~~~~~-------------------~~~~~~~~~i~~Pvl~i 183 (250)
...... ..+. ...+.+.. .++.... ....-.+.++++|+.+.
T Consensus 259 ~~~~~~G~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~ 338 (403)
T KOG2624|consen 259 FLFLLVGWNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALY 338 (403)
T ss_pred HHHHHcCcchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEE
Confidence 000000 0000 01111111 1111110 01112456779999999
Q ss_pred eeCCCcccChHHHHHHHHHhCCCCcEEE---EeCCCCcccccCCchHHHHHHHHHHHHHHhhc
Q 025629 184 HGENDTVTDPSVSKALYEKASSKDKKCI---LYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 184 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~---~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
+|++|.++.++....+.... ++.... .+++-.|.-++= ...+.+++.+.|.+.++..
T Consensus 339 ~g~~D~l~~~~DV~~~~~~~--~~~~~~~~~~~~~ynHlDFi~-g~da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 339 YGDNDWLADPEDVLILLLVL--PNSVIKYIVPIPEYNHLDFIW-GLDAKEEVYDPVIERLRLF 398 (403)
T ss_pred ecCCcccCCHHHHHHHHHhc--ccccccccccCCCccceeeee-ccCcHHHHHHHHHHHHHhh
Confidence 99999999999999888877 333332 278888965541 1222334777777777643
No 109
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.98 E-value=2.9e-08 Score=69.81 Aligned_cols=108 Identities=19% Similarity=0.230 Sum_probs=70.8
Q ss_pred CCCcEEEEEeccchHHHHHHHhhC-----CCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhh
Q 025629 58 PTSKVFLFGQSLGGAVALKVHLKQ-----PNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEA 132 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (250)
+..++.|.|||-||-+|..++..+ +.+++++|+++|......... ..+.
T Consensus 89 D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~--------------------~~P~------ 142 (259)
T PF12740_consen 89 DFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQ--------------------TEPP------ 142 (259)
T ss_pred cccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccC--------------------CCCc------
Confidence 346899999999999999999887 568999999999763221100 0000
Q ss_pred hhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCc---------ccChH-HHHHHHHH
Q 025629 133 AFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDT---------VTDPS-VSKALYEK 202 (250)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~---------~~~~~-~~~~~~~~ 202 (250)
.+ .....--+.++|+++|..+-+. -.|.. .-+++++.
T Consensus 143 v~---------------------------------~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~ 189 (259)
T PF12740_consen 143 VL---------------------------------TYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDE 189 (259)
T ss_pred cc---------------------------------cCcccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHh
Confidence 00 0011112346899999766663 22322 34678888
Q ss_pred hCCCCcEEEEeCCCCcccccCCc
Q 025629 203 ASSKDKKCILYKDAFHSLLEGEP 225 (250)
Q Consensus 203 ~~~~~~~~~~~~~~gH~~~~~~~ 225 (250)
+. +.+-..+.++.||+-+++..
T Consensus 190 ~~-~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 190 CK-PPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred cC-CCEEEEEeCCCCchHhhcCC
Confidence 75 45666777899999888765
No 110
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.95 E-value=1.8e-08 Score=67.02 Aligned_cols=54 Identities=19% Similarity=0.219 Sum_probs=43.7
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCC----CceeeEEEeccccc
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQP----NAWSGAILVAPMCK 96 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p----~~v~~lvl~~~~~~ 96 (250)
..|+...+....++.+.++++|+|.|+|+-+......+.| ++|+.++|++|...
T Consensus 51 a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 51 AADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred HHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 5566666666777778899999999999999888887776 47999999998653
No 111
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.94 E-value=1.8e-08 Score=76.14 Aligned_cols=118 Identities=19% Similarity=0.270 Sum_probs=68.7
Q ss_pred ccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhh
Q 025629 55 SIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAF 134 (250)
Q Consensus 55 ~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (250)
..++..++.++|||+||..++..+.+. .++++.|+++|+.....
T Consensus 223 grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W~~Pl~----------------------------------- 266 (379)
T PF03403_consen 223 GRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILLDPWMFPLG----------------------------------- 266 (379)
T ss_dssp T-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEES---TTS------------------------------------
T ss_pred hhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEeCCcccCCC-----------------------------------
Confidence 334457899999999999999988776 57999999999753110
Q ss_pred cccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHh-CCCCcEEEEe
Q 025629 135 RDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKA-SSKDKKCILY 213 (250)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~ 213 (250)
.+....++.|+|+|..+. +...+....+.+.. ..++..+..+
T Consensus 267 -----------------------------------~~~~~~i~~P~L~InSe~--f~~~~~~~~~~~~~~~~~~~~~~ti 309 (379)
T PF03403_consen 267 -----------------------------------DEIYSKIPQPLLFINSES--FQWWENIFRMKKVISNNKESRMLTI 309 (379)
T ss_dssp -----------------------------------GGGGGG--S-EEEEEETT--T--HHHHHHHHTT--TTS-EEEEEE
T ss_pred -----------------------------------cccccCCCCCEEEEECcc--cCChhhHHHHHHHhccCCCcEEEEE
Confidence 011134678999998775 22333333333322 1256788999
Q ss_pred CCCCcccccC-------------------CchHHHHHHHHHHHHHHhhcCC
Q 025629 214 KDAFHSLLEG-------------------EPDDMIIRVFADIISWLDDHSR 245 (250)
Q Consensus 214 ~~~gH~~~~~-------------------~~~~~~~~~~~~i~~fl~~~~~ 245 (250)
.|+.|.-+-+ +|....+...+.+.+||++++.
T Consensus 310 ~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~ 360 (379)
T PF03403_consen 310 KGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLG 360 (379)
T ss_dssp TT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcC
Confidence 9999976432 4555566677888999998864
No 112
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.94 E-value=8.4e-09 Score=72.26 Aligned_cols=55 Identities=24% Similarity=0.395 Sum_probs=42.1
Q ss_pred hhchHhHHHHhhcc-----CCCCcEEEEEeccchHHHHHHHhhCCC----ceeeEEEecccccc
Q 025629 43 FPALTGWLMMSSSI-----IPTSKVFLFGQSLGGAVALKVHLKQPN----AWSGAILVAPMCKI 97 (250)
Q Consensus 43 ~~d~~~~~~~~~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~ 97 (250)
++|..+.+..++++ .+.++++|+|+|.||.+++.++.+..+ .++++++++|....
T Consensus 49 ~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 49 LEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 55555555666666 556799999999999999999875322 48999999997644
No 113
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.93 E-value=2e-09 Score=78.03 Aligned_cols=80 Identities=19% Similarity=0.177 Sum_probs=55.6
Q ss_pred ccccccch-hhHHHhh-HH-hhh-hhhhhhhc----------------------hHhHHHHhhcc--CCCCcEEEEEecc
Q 025629 18 WHHLDTEF-SLWITLD-LA-FQQ-VFMATFPA----------------------LTGWLMMSSSI--IPTSKVFLFGQSL 69 (250)
Q Consensus 18 ~hg~~~~~-~~~~~~~-~~-l~~-~~~~~~~d----------------------~~~~~~~~~~~--~~~~~~~lvGhS~ 69 (250)
.||+..+. ..|...+ .. +.. .+.++..| +...+..+.+. .+.+++++|||||
T Consensus 42 IHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSl 121 (275)
T cd00707 42 IHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSL 121 (275)
T ss_pred EcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecH
Confidence 48888776 5675443 32 332 36665332 22233333333 3457899999999
Q ss_pred chHHHHHHHhhCCCceeeEEEecccccc
Q 025629 70 GGAVALKVHLKQPNAWSGAILVAPMCKI 97 (250)
Q Consensus 70 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 97 (250)
||.+|..++.++|++|.++++++|....
T Consensus 122 Ga~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 122 GAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHHHHhcCccceeEEecCCccc
Confidence 9999999999999999999999987643
No 114
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.91 E-value=3.9e-08 Score=86.71 Aligned_cols=81 Identities=12% Similarity=0.030 Sum_probs=65.0
Q ss_pred cccccccccchhhHHHhhHHhhhhhhhh----------------hhchHhHHHHhhccCC-CCcEEEEEeccchHHHHHH
Q 025629 15 QGSWHHLDTEFSLWITLDLAFQQVFMAT----------------FPALTGWLMMSSSIIP-TSKVFLFGQSLGGAVALKV 77 (250)
Q Consensus 15 ~g~~hg~~~~~~~~~~~~~~l~~~~~~~----------------~~d~~~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~~~ 77 (250)
--..||.+.+...|..+...|...++++ ++++++++...++... ..+++++||||||.++..+
T Consensus 1071 l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~ 1150 (1296)
T PRK10252 1071 LFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGI 1150 (1296)
T ss_pred eEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHH
Confidence 3457999999999999999998776665 4556666666666543 4589999999999999999
Q ss_pred Hhh---CCCceeeEEEecccc
Q 025629 78 HLK---QPNAWSGAILVAPMC 95 (250)
Q Consensus 78 a~~---~p~~v~~lvl~~~~~ 95 (250)
|.+ .++++..++++++..
T Consensus 1151 A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1151 AARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred HHHHHHcCCceeEEEEecCCC
Confidence 985 578899999998743
No 115
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.91 E-value=1.4e-09 Score=72.17 Aligned_cols=133 Identities=13% Similarity=0.171 Sum_probs=84.5
Q ss_pred hhchHhHHHHhhccCCC-CcEEEEEeccchHHHHHHHhh-CCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCC
Q 025629 43 FPALTGWLMMSSSIIPT-SKVFLFGQSLGGAVALKVHLK-QPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPK 120 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (250)
+.++...+.-+++..+. +.+.+-|||.|+.++..+..+ +..+|.+++++++...... +...-..
T Consensus 118 ~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~E--------------L~~te~g 183 (270)
T KOG4627|consen 118 MTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRE--------------LSNTESG 183 (270)
T ss_pred HHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHH--------------HhCCccc
Confidence 44455555556666654 445667999999999987765 4458999999988764221 0000000
Q ss_pred CcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHH
Q 025629 121 HKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALY 200 (250)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~ 200 (250)
. ........ .+. ...+ ...+..+++|+|++.|++|..--.++.+.+.
T Consensus 184 ~---------dlgLt~~~-ae~----------------------~Scd-l~~~~~v~~~ilVv~~~~espklieQnrdf~ 230 (270)
T KOG4627|consen 184 N---------DLGLTERN-AES----------------------VSCD-LWEYTDVTVWILVVAAEHESPKLIEQNRDFA 230 (270)
T ss_pred c---------ccCcccch-hhh----------------------cCcc-HHHhcCceeeeeEeeecccCcHHHHhhhhHH
Confidence 0 00000000 000 0001 2356678899999999999876678888999
Q ss_pred HHhCCCCcEEEEeCCCCcccccCC
Q 025629 201 EKASSKDKKCILYKDAFHSLLEGE 224 (250)
Q Consensus 201 ~~~~~~~~~~~~~~~~gH~~~~~~ 224 (250)
..+ ..+++..+++.+|+-.++.
T Consensus 231 ~q~--~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 231 DQL--RKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred HHh--hhcceeecCCcchhhHHHH
Confidence 888 6789999999999877654
No 116
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.89 E-value=5.3e-08 Score=65.80 Aligned_cols=63 Identities=22% Similarity=0.242 Sum_probs=48.8
Q ss_pred hccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhc
Q 025629 172 RLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 172 ~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
....+++|.|-|.|+.|.++|.+.+..+++.+ ++..++.-+ +||.++... . ..+.|.+|+...
T Consensus 158 ~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~--~~a~vl~Hp-ggH~VP~~~--~----~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 158 YKRPLSTPSLHIFGETDTIVPSERSEQLAESF--KDATVLEHP-GGHIVPNKA--K----YKEKIADFIQSF 220 (230)
T ss_pred hccCCCCCeeEEecccceeecchHHHHHHHhc--CCCeEEecC-CCccCCCch--H----HHHHHHHHHHHH
Confidence 34578999999999999999999999999999 666555555 789998755 3 455666666543
No 117
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.87 E-value=7.3e-08 Score=79.02 Aligned_cols=161 Identities=17% Similarity=0.212 Sum_probs=103.3
Q ss_pred hhhhhhchHhHHHHhhccC--CCCcEEEEEeccchHHHHHHHhhCCC-ceeeEEEeccccccCCCCCCHHHHHHHHHHHh
Q 025629 39 FMATFPALTGWLMMSSSII--PTSKVFLFGQSLGGAVALKVHLKQPN-AWSGAILVAPMCKIADDMVPPFLVKQILIGIA 115 (250)
Q Consensus 39 ~~~~~~d~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (250)
+..-+.|....+..+++.. +.+++.+.|+|.||++++..+...|+ -+++.|.++|.....-.
T Consensus 585 G~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~y--------------- 649 (755)
T KOG2100|consen 585 GDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYY--------------- 649 (755)
T ss_pred CCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeee---------------
Confidence 3344666666666666654 45789999999999999999999984 45555999997653210
Q ss_pred hhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCE-EEEeeCCCcccChH
Q 025629 116 NILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPL-LILHGENDTVTDPS 194 (250)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv-l~i~g~~D~~~~~~ 194 (250)
........+..+.... .. +... .....+..++.|. |++||+.|.-|+.+
T Consensus 650 ----------ds~~terymg~p~~~~---------------~~----y~e~-~~~~~~~~~~~~~~LliHGt~DdnVh~q 699 (755)
T KOG2100|consen 650 ----------DSTYTERYMGLPSEND---------------KG----YEES-SVSSPANNIKTPKLLLIHGTEDDNVHFQ 699 (755)
T ss_pred ----------cccccHhhcCCCcccc---------------ch----hhhc-cccchhhhhccCCEEEEEcCCcCCcCHH
Confidence 0000000000000000 00 0000 2233445555555 99999999999999
Q ss_pred HHHHHHHHhCC--CCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhcCCCC
Q 025629 195 VSKALYEKASS--KDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRSS 247 (250)
Q Consensus 195 ~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 247 (250)
++..+.+.+.. -..+..++|+.+|.+..-.... .+...+..|+..++...
T Consensus 700 ~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~---~~~~~~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 700 QSAILIKALQNAGVPFRLLVYPDENHGISYVEVIS---HLYEKLDRFLRDCFGSP 751 (755)
T ss_pred HHHHHHHHHHHCCCceEEEEeCCCCcccccccchH---HHHHHHHHHHHHHcCcc
Confidence 98888887742 2378999999999987644322 38889999999776543
No 118
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.87 E-value=3.8e-07 Score=64.69 Aligned_cols=80 Identities=20% Similarity=0.228 Sum_probs=58.6
Q ss_pred cccccccchhhHHHhhHHhhhhhhhh----------------hhchHhHH-HHhhccCCCCcEEEEEeccchHHHHHHHh
Q 025629 17 SWHHLDTEFSLWITLDLAFQQVFMAT----------------FPALTGWL-MMSSSIIPTSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 17 ~~hg~~~~~~~~~~~~~~l~~~~~~~----------------~~d~~~~~-~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
.+|+.++....|..+...+.....++ ++++++.. ..+.+.-+..+++|+|||+||.+|..+|.
T Consensus 5 ~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~ 84 (257)
T COG3319 5 CFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAA 84 (257)
T ss_pred EEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHH
Confidence 35777777777777777776654443 55555544 34444456789999999999999999997
Q ss_pred h---CCCceeeEEEeccccc
Q 025629 80 K---QPNAWSGAILVAPMCK 96 (250)
Q Consensus 80 ~---~p~~v~~lvl~~~~~~ 96 (250)
+ ..+.|..++++++...
T Consensus 85 qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 85 QLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHhCCCeEEEEEEeccCCC
Confidence 6 3457999999998876
No 119
>PRK04940 hypothetical protein; Provisional
Probab=98.86 E-value=1.1e-07 Score=63.21 Aligned_cols=117 Identities=14% Similarity=0.203 Sum_probs=72.6
Q ss_pred CcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccch
Q 025629 60 SKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKN 139 (250)
Q Consensus 60 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (250)
+++.|||.|+||+.|..+|.++. + ..|+++|...+.. .+.. .... +..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~P~~------~L~~-------~ig~----~~~------------ 107 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLFPEE------NMEG-------KIDR----PEE------------ 107 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCChHH------HHHH-------HhCC----Ccc------------
Confidence 57999999999999999999986 3 6789999875321 1111 1100 000
Q ss_pred hhhhhcccccccCchhhHHHHHHHHhhHHHHHhcc-CCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCc-EEEEeCCCC
Q 025629 140 RELTKYNVIVYKDKPRLRTALELLKTTEGIERRLE-KVSLPLLILHGENDTVTDPSVSKALYEKASSKDK-KCILYKDAF 217 (250)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g 217 (250)
+. .+. ....+.++ +-.-..+++..+.|.+.+...+...+ .++ +.++.+|+.
T Consensus 108 ----------y~---------~~~---~~h~~eL~~~~p~r~~vllq~gDEvLDyr~a~~~y-----~~~y~~~v~~GGd 160 (180)
T PRK04940 108 ----------YA---------DIA---TKCVTNFREKNRDRCLVILSRNDEVLDSQRTAEEL-----HPYYEIVWDEEQT 160 (180)
T ss_pred ----------hh---------hhh---HHHHHHhhhcCcccEEEEEeCCCcccCHHHHHHHh-----ccCceEEEECCCC
Confidence 00 000 01111111 22234689999999999887665444 344 688888888
Q ss_pred cccccCCchHHHHHHHHHHHHHHh
Q 025629 218 HSLLEGEPDDMIIRVFADIISWLD 241 (250)
Q Consensus 218 H~~~~~~~~~~~~~~~~~i~~fl~ 241 (250)
|.+. .-++ ....|.+|++
T Consensus 161 H~f~--~fe~----~l~~I~~F~~ 178 (180)
T PRK04940 161 HKFK--NISP----HLQRIKAFKT 178 (180)
T ss_pred CCCC--CHHH----HHHHHHHHHh
Confidence 8764 2333 7888999985
No 120
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.83 E-value=3.9e-08 Score=75.71 Aligned_cols=128 Identities=17% Similarity=0.210 Sum_probs=90.7
Q ss_pred hhccCCCCcEEEEEeccchHHHHHHHhhCC-CceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhh
Q 025629 53 SSSIIPTSKVFLFGQSLGGAVALKVHLKQP-NAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAE 131 (250)
Q Consensus 53 ~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (250)
+..+++..+++|+|.|||+.++.+...... ..|+++|+++-+........
T Consensus 243 i~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr----------------------------- 293 (784)
T KOG3253|consen 243 ITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR----------------------------- 293 (784)
T ss_pred hhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc-----------------------------
Confidence 334567789999999999888887765543 34899998886543221100
Q ss_pred hhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEE
Q 025629 132 AAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCI 211 (250)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 211 (250)
. ...+.+-.++.|+|++.|.+|..++++..+.+.+++. ...+++
T Consensus 294 -g----------------------------------irDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMq-A~~elh 337 (784)
T KOG3253|consen 294 -G----------------------------------IRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQ-AEVELH 337 (784)
T ss_pred -C----------------------------------CcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhh-ccceEE
Confidence 0 1123445678999999999999999999999999987 568899
Q ss_pred EeCCCCcccccCC---------chHHHHHHHHHHHHHHhhcCC
Q 025629 212 LYKDAFHSLLEGE---------PDDMIIRVFADIISWLDDHSR 245 (250)
Q Consensus 212 ~~~~~gH~~~~~~---------~~~~~~~~~~~i~~fl~~~~~ 245 (250)
++.+++|.+-... ..++...+.++|.+|+...+.
T Consensus 338 VI~~adhsmaipk~k~esegltqseVd~~i~~aI~efvt~~l~ 380 (784)
T KOG3253|consen 338 VIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVTIALN 380 (784)
T ss_pred EecCCCccccCCccccccccccHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999876533 233344466666777665443
No 121
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.79 E-value=1.4e-08 Score=70.79 Aligned_cols=47 Identities=34% Similarity=0.390 Sum_probs=31.9
Q ss_pred cCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCC-cEEEEeCCCCcccccC
Q 025629 174 EKVSLPLLILHGENDTVTDPSVSKALYEKASSKD-KKCILYKDAFHSLLEG 223 (250)
Q Consensus 174 ~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~ 223 (250)
..|++|+|.|+|++|.+++++.++.+.+.+ .+ .+++..+ +||.++..
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~--~~~~~v~~h~-gGH~vP~~ 205 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPERSEALAEMF--DPDARVIEHD-GGHHVPRK 205 (212)
T ss_dssp TT---EEEEEEETT-SSS-HHHHHHHHHHH--HHHEEEEEES-SSSS----
T ss_pred ccCCCCeEEEEeCCCCCcchHHHHHHHHhc--cCCcEEEEEC-CCCcCcCC
Confidence 456899999999999999999999999998 44 6666665 78988764
No 122
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.78 E-value=1.8e-08 Score=77.06 Aligned_cols=73 Identities=14% Similarity=0.038 Sum_probs=54.3
Q ss_pred chhhHHHhhHHhhhhhhhh--------------------hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCC
Q 025629 24 EFSLWITLDLAFQQVFMAT--------------------FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPN 83 (250)
Q Consensus 24 ~~~~~~~~~~~l~~~~~~~--------------------~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 83 (250)
....|..+++.|.+.+++. +.++...+..+.++.+.++++|+||||||.++..++..+|+
T Consensus 106 ~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~ 185 (440)
T PLN02733 106 EVYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSD 185 (440)
T ss_pred hHHHHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCH
Confidence 4467777888777664332 33444445555566778899999999999999999998886
Q ss_pred ----ceeeEEEeccccc
Q 025629 84 ----AWSGAILVAPMCK 96 (250)
Q Consensus 84 ----~v~~lvl~~~~~~ 96 (250)
.|+++|.++++..
T Consensus 186 ~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 186 VFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred hHHhHhccEEEECCCCC
Confidence 3789999987654
No 123
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.77 E-value=7.9e-08 Score=64.47 Aligned_cols=111 Identities=25% Similarity=0.334 Sum_probs=77.0
Q ss_pred CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhccc
Q 025629 58 PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDL 137 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (250)
+..++.+-|.|+||.+++..+..+|..+.+++-..+........ ++..
T Consensus 91 ~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~----------------~~~~---------------- 138 (206)
T KOG2112|consen 91 PSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG----------------LPGW---------------- 138 (206)
T ss_pred CccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh----------------ccCC----------------
Confidence 45678999999999999999999988787777766654311100 0000
Q ss_pred chhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCC--CCcEEEEeCC
Q 025629 138 KNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASS--KDKKCILYKD 215 (250)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 215 (250)
..... ..|++..||+.|++||....+...+.+.. ..++++.|++
T Consensus 139 --------------------------------~~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g 184 (206)
T KOG2112|consen 139 --------------------------------LPGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPG 184 (206)
T ss_pred --------------------------------ccccC--cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCC
Confidence 00000 57999999999999998766555544421 3389999999
Q ss_pred CCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 216 AFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 216 ~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
-+|... +++ .+.+..|+++
T Consensus 185 ~~h~~~---~~e-----~~~~~~~~~~ 203 (206)
T KOG2112|consen 185 LGHSTS---PQE-----LDDLKSWIKT 203 (206)
T ss_pred cccccc---HHH-----HHHHHHHHHH
Confidence 999864 554 5777888875
No 124
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.77 E-value=1.6e-06 Score=63.54 Aligned_cols=65 Identities=28% Similarity=0.405 Sum_probs=49.8
Q ss_pred CCCEEEEeeCCCcccChHHHHHHHHHhC--C-CCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhcCCCCC
Q 025629 177 SLPLLILHGENDTVTDPSVSKALYEKAS--S-KDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRSST 248 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~~ 248 (250)
++|+++.+|..|.++|....+.+.+.+. . .++++..++..+|....-. -.....+|+.+++....
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~-------~~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA-------SAPDALAWLDDRFAGKP 286 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc-------CcHHHHHHHHHHHCCCC
Confidence 7899999999999999999888887763 2 3678888899999864311 23556789988876543
No 125
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.76 E-value=1.4e-06 Score=64.45 Aligned_cols=167 Identities=23% Similarity=0.285 Sum_probs=93.7
Q ss_pred hhchHhHHHHhhcc------CCCCcEEEEEeccchHHHHHHHhhC------CCceeeEEEeccccccCCCCCCHHHH---
Q 025629 43 FPALTGWLMMSSSI------IPTSKVFLFGQSLGGAVALKVHLKQ------PNAWSGAILVAPMCKIADDMVPPFLV--- 107 (250)
Q Consensus 43 ~~d~~~~~~~~~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~--- 107 (250)
++|-...+..+.++ .+.++++|+|-|.||.+|..+|.+. +.++++.|++-|.........+....
T Consensus 143 y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~ 222 (336)
T KOG1515|consen 143 YDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLN 222 (336)
T ss_pred chHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhc
Confidence 45555555444443 3567899999999999999888652 35799999999987655432221110
Q ss_pred -------HHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCC-C
Q 025629 108 -------KQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSL-P 179 (250)
Q Consensus 108 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P 179 (250)
...........+.... . ...+...... . .......-..+ |
T Consensus 223 ~~~~~~~~~~~~~w~~~lP~~~~--------------------~------~~~p~~np~~----~--~~~~d~~~~~lp~ 270 (336)
T KOG1515|consen 223 GSPELARPKIDKWWRLLLPNGKT--------------------D------LDHPFINPVG----N--SLAKDLSGLGLPP 270 (336)
T ss_pred CCcchhHHHHHHHHHHhCCCCCC--------------------C------cCCccccccc----c--ccccCccccCCCc
Confidence 0000000000010000 0 0000000000 0 00011222334 6
Q ss_pred EEEEeeCCCcccChHHHHHHHHHhCC--CCcEEEEeCCCCcccccCCch-HHHHHHHHHHHHHHhhc
Q 025629 180 LLILHGENDTVTDPSVSKALYEKASS--KDKKCILYKDAFHSLLEGEPD-DMIIRVFADIISWLDDH 243 (250)
Q Consensus 180 vl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~i~~fl~~~ 243 (250)
+|++.++.|.+.. ....+.+++.+ -.+++.+++++.|.++.-.|. ....++.+.+.+|+++.
T Consensus 271 tlv~~ag~D~L~D--~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 271 TLVVVAGYDVLRD--EGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred eEEEEeCchhhhh--hhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 9999999998863 44444444432 345667899999988877775 55667889999999864
No 126
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.73 E-value=1.8e-07 Score=65.73 Aligned_cols=41 Identities=24% Similarity=0.303 Sum_probs=33.6
Q ss_pred CCCcEEEEEeccchHHHHHHHhhCC---CceeeEEEeccccccC
Q 025629 58 PTSKVFLFGQSLGGAVALKVHLKQP---NAWSGAILVAPMCKIA 98 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~ 98 (250)
+.++++||||||||.+|..++...+ +.|+.+|.++++....
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 6789999999999999998876543 5799999999876433
No 127
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.72 E-value=4.8e-07 Score=68.97 Aligned_cols=54 Identities=17% Similarity=0.182 Sum_probs=43.2
Q ss_pred hHhHHHHhhccCCCC-cEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCC
Q 025629 46 LTGWLMMSSSIIPTS-KVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIAD 99 (250)
Q Consensus 46 ~~~~~~~~~~~~~~~-~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 99 (250)
.+.++..+.+..+.. +.+|+|.+.||+.++++|+.+|+.+.-+|+-+++.....
T Consensus 125 e~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 125 EAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSYWA 179 (581)
T ss_pred HHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccccc
Confidence 344555555555543 899999999999999999999999999999887776655
No 128
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.71 E-value=1.2e-06 Score=60.64 Aligned_cols=176 Identities=19% Similarity=0.198 Sum_probs=107.0
Q ss_pred ccccccchhhHHHhhHHhhhhhhhh---------------------------------------hhchHhHHHHhh----
Q 025629 18 WHHLDTEFSLWITLDLAFQQVFMAT---------------------------------------FPALTGWLMMSS---- 54 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~~~~~~---------------------------------------~~d~~~~~~~~~---- 54 (250)
.||.+++.......+..+...++.. ..+...++..++
T Consensus 51 IhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~msyL~ 130 (288)
T COG4814 51 IHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAMSYLQ 130 (288)
T ss_pred EecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHHHHHH
Confidence 4888888888888888888777432 556666765544
Q ss_pred ccCCCCcEEEEEeccchHHHHHHHhhCCC-----ceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchh
Q 025629 55 SIIPTSKVFLFGQSLGGAVALKVHLKQPN-----AWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDL 129 (250)
Q Consensus 55 ~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
++++..++.+|||||||.-...|+..+.. .++.+|.++++.. ..... +....
T Consensus 131 ~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN-~~~l~----------------------~de~v 187 (288)
T COG4814 131 KHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN-VGNLV----------------------PDETV 187 (288)
T ss_pred HhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc-ccccC----------------------CCcch
Confidence 45678999999999999999999887532 4899999987765 11100 01000
Q ss_pred hhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCC--CCCEEEEeeCC------CcccChHHHHHHHH
Q 025629 130 AEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKV--SLPLLILHGEN------DTVTDPSVSKALYE 201 (250)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~Pvl~i~g~~------D~~~~~~~~~~~~~ 201 (250)
.......+.. ... .+.+ -.......+ +..+|+|.|+- |..||...+...+.
T Consensus 188 ~~v~~~~~~~-----------~~t----~y~~------y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~ 246 (288)
T COG4814 188 TDVLKDGPGL-----------IKT----PYYD------YIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYH 246 (288)
T ss_pred heeeccCccc-----------cCc----HHHH------HHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHH
Confidence 0000100000 000 0000 111222223 46799999985 45677777766666
Q ss_pred HhCCCCcEEE--Ee--CCCCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 202 KASSKDKKCI--LY--KDAFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 202 ~~~~~~~~~~--~~--~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
.+......++ ++ +++.|.-+.|.|. +.+.+.+||-+
T Consensus 247 lf~~~~ksy~e~~~~Gk~a~Hs~lhen~~-----v~~yv~~FLw~ 286 (288)
T COG4814 247 LFKKNGKSYIESLYKGKDARHSKLHENPT-----VAKYVKNFLWE 286 (288)
T ss_pred HhccCcceeEEEeeeCCcchhhccCCChh-----HHHHHHHHhhc
Confidence 6643222222 33 4588998888877 78899999864
No 129
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.70 E-value=1.4e-07 Score=75.51 Aligned_cols=39 Identities=18% Similarity=0.145 Sum_probs=34.8
Q ss_pred CCcEEEEEeccchHHHHHHHhhCCCceeeEEEecccccc
Q 025629 59 TSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 97 (250)
Q Consensus 59 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 97 (250)
..++.++|||+||.+++.+|..+|++++++|..++....
T Consensus 96 ~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 96 DGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDL 134 (550)
T ss_pred CCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccch
Confidence 358999999999999999999999999999998877543
No 130
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.70 E-value=4.2e-07 Score=67.68 Aligned_cols=153 Identities=14% Similarity=0.155 Sum_probs=96.3
Q ss_pred CCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcc
Q 025629 57 IPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRD 136 (250)
Q Consensus 57 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (250)
..+++++|.|.|==|..++..|+. .+||++++-+.-..- .....+....+.+. ......-.......
T Consensus 169 ~~i~~FvV~GaSKRGWTtWltaa~-D~RV~aivP~Vid~L-----N~~~~l~h~y~~yG---~~ws~a~~dY~~~g---- 235 (367)
T PF10142_consen 169 VNIEKFVVTGASKRGWTTWLTAAV-DPRVKAIVPIVIDVL-----NMKANLEHQYRSYG---GNWSFAFQDYYNEG---- 235 (367)
T ss_pred CCccEEEEeCCchHhHHHHHhhcc-CcceeEEeeEEEccC-----CcHHHHHHHHHHhC---CCCccchhhhhHhC----
Confidence 368899999999999999999984 458888876543221 01111222222222 01111101111111
Q ss_pred cchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCC
Q 025629 137 LKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDA 216 (250)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (250)
.......+.+....+.. |......++++|.++|.|..|++..+.....+++.++ ..+.+..+|++
T Consensus 236 ----------i~~~l~tp~f~~L~~iv----DP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~-G~K~lr~vPN~ 300 (367)
T PF10142_consen 236 ----------ITQQLDTPEFDKLMQIV----DPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLP-GEKYLRYVPNA 300 (367)
T ss_pred ----------chhhcCCHHHHHHHHhc----CHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCC-CCeeEEeCCCC
Confidence 11112222233333333 3344556779999999999999999999999999996 35789999999
Q ss_pred CcccccCCchHHHHHHHHHHHHHHhhcC
Q 025629 217 FHSLLEGEPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 217 gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 244 (250)
+|.... .. +.+.+..|+....
T Consensus 301 ~H~~~~---~~----~~~~l~~f~~~~~ 321 (367)
T PF10142_consen 301 GHSLIG---SD----VVQSLRAFYNRIQ 321 (367)
T ss_pred Ccccch---HH----HHHHHHHHHHHHH
Confidence 999875 33 7888888887654
No 131
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.67 E-value=1.6e-07 Score=64.55 Aligned_cols=176 Identities=13% Similarity=0.107 Sum_probs=86.6
Q ss_pred cccccchhhHHHhhHHhhhh-hhhh-------------------hhchHhHHH---HhhccCCCCcEEEEEeccchHHHH
Q 025629 19 HHLDTEFSLWITLDLAFQQV-FMAT-------------------FPALTGWLM---MSSSIIPTSKVFLFGQSLGGAVAL 75 (250)
Q Consensus 19 hg~~~~~~~~~~~~~~l~~~-~~~~-------------------~~d~~~~~~---~~~~~~~~~~~~lvGhS~Gg~~a~ 75 (250)
.|++.....+..++..|+.. |+|+ +.....++. +.++..+..++.|+.-|+.|-+|+
T Consensus 37 ~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy 116 (294)
T PF02273_consen 37 PGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAY 116 (294)
T ss_dssp -TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHH
Confidence 35555666666666666654 5665 223333333 334466888999999999999999
Q ss_pred HHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchh
Q 025629 76 KVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPR 155 (250)
Q Consensus 76 ~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (250)
..|.+- .+.-+|..-+..... ..+.+.+..-+-.. +...... + . ...... ...
T Consensus 117 ~Va~~i--~lsfLitaVGVVnlr---------~TLe~al~~Dyl~~---~i~~lp~----d------l--dfeGh~-l~~ 169 (294)
T PF02273_consen 117 EVAADI--NLSFLITAVGVVNLR---------DTLEKALGYDYLQL---PIEQLPE----D------L--DFEGHN-LGA 169 (294)
T ss_dssp HHTTTS----SEEEEES--S-HH---------HHHHHHHSS-GGGS----GGG--S----E------E--EETTEE-EEH
T ss_pred HHhhcc--CcceEEEEeeeeeHH---------HHHHHHhccchhhc---chhhCCC----c------c--cccccc-cch
Confidence 999854 477777776654321 11111111100000 0000000 0 0 000000 000
Q ss_pred hHHHHHHH----HhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccc
Q 025629 156 LRTALELL----KTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLL 221 (250)
Q Consensus 156 ~~~~~~~~----~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 221 (250)
-....+.+ .........++.+.+|++.+.+++|.+|......++...+.++.++++.++|++|.+-
T Consensus 170 ~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 170 EVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp HHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred HHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh
Confidence 00111111 1112344677888999999999999999999999999988778899999999999875
No 132
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.63 E-value=4.9e-07 Score=62.28 Aligned_cols=65 Identities=12% Similarity=0.059 Sum_probs=50.6
Q ss_pred HhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHH
Q 025629 171 RRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWL 240 (250)
Q Consensus 171 ~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 240 (250)
+..++-.+-+.+.+|.+|.+||.+....+.+.++..+.++-+ ++.-|.+...+.+. .++.+.+.+
T Consensus 236 e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~----ma~~v~d~~ 300 (301)
T KOG3975|consen 236 EYCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQY----MANAVFDMI 300 (301)
T ss_pred HHHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeecccHH----HHHHHHHhh
Confidence 334444577889999999999999999999999655666666 78999999888887 666665544
No 133
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.63 E-value=1.2e-06 Score=68.29 Aligned_cols=192 Identities=18% Similarity=0.107 Sum_probs=116.9
Q ss_pred hhhhhhhhhhccccccccccchhhHHHhhHHhhhhhhhhhhchHhHHHHhhccCC---CCcEEEEEeccchHHHHHHHhh
Q 025629 4 ETLAHFSLKELQGSWHHLDTEFSLWITLDLAFQQVFMATFPALTGWLMMSSSIIP---TSKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 4 ~~~~~~G~g~~~g~~hg~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~---~~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
..||..|+-...-+-.|-......|...+. .+-+.|-++|.++-+..+.++.+ .++|.+-|+|+||+++++...+
T Consensus 670 ~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik--~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~ 747 (867)
T KOG2281|consen 670 CRLASLGYVVVFIDNRGSAHRGLKFESHIK--KKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQ 747 (867)
T ss_pred hhhhhcceEEEEEcCCCccccchhhHHHHh--hccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhc
Confidence 456677766655555555555544433321 12256668999999999998874 5789999999999999999999
Q ss_pred CCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHH
Q 025629 81 QPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTAL 160 (250)
Q Consensus 81 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (250)
+|+-++..|.-+|...... . ........+.-+...+ ..|..
T Consensus 748 ~P~IfrvAIAGapVT~W~~------------------------Y-DTgYTERYMg~P~~nE------~gY~a-------- 788 (867)
T KOG2281|consen 748 YPNIFRVAIAGAPVTDWRL------------------------Y-DTGYTERYMGYPDNNE------HGYGA-------- 788 (867)
T ss_pred CcceeeEEeccCcceeeee------------------------e-cccchhhhcCCCccch------hcccc--------
Confidence 9987776666555432110 0 0000011111110000 00000
Q ss_pred HHHHhhHHHHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhC--CCCcEEEEeCCCCcccccCCchHHHHHHHHHHHH
Q 025629 161 ELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKAS--SKDKKCILYKDAFHSLLEGEPDDMIIRVFADIIS 238 (250)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~ 238 (250)
.......+.+..-+...|++||--|.-|.......+...+- ++.-++.++|+-.|.+-.-+... ..-..+..
T Consensus 789 ---gSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~---~yE~rll~ 862 (867)
T KOG2281|consen 789 ---GSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGI---YYEARLLH 862 (867)
T ss_pred ---hhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccch---hHHHHHHH
Confidence 00002224455556679999999999888776666665542 24578999999999986544433 25667888
Q ss_pred HHhh
Q 025629 239 WLDD 242 (250)
Q Consensus 239 fl~~ 242 (250)
|+.+
T Consensus 863 FlQ~ 866 (867)
T KOG2281|consen 863 FLQE 866 (867)
T ss_pred HHhh
Confidence 8765
No 134
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.62 E-value=6.6e-07 Score=65.22 Aligned_cols=87 Identities=9% Similarity=0.008 Sum_probs=50.4
Q ss_pred hhhhhhhhccccccccccchhhHHHhhHHhhhhhhhhhhchHhHHHHhhcc-CCCCcEEEEEeccchHHHHHHHhhCCCc
Q 025629 6 LAHFSLKELQGSWHHLDTEFSLWITLDLAFQQVFMATFPALTGWLMMSSSI-IPTSKVFLFGQSLGGAVALKVHLKQPNA 84 (250)
Q Consensus 6 ~~~~G~g~~~g~~hg~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 84 (250)
++.+|+..-.-+..|.+.+.-.|....+.- ..|..+.+.-+.++ ....+|.++|.|++|..++.+|...|..
T Consensus 53 ~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e-------~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~ 125 (272)
T PF02129_consen 53 FAERGYAVVVQDVRGTGGSEGEFDPMSPNE-------AQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPH 125 (272)
T ss_dssp HHHTT-EEEEEE-TTSTTS-S-B-TTSHHH-------HHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TT
T ss_pred HHhCCCEEEEECCcccccCCCccccCChhH-------HHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCC
Confidence 566666666666666666655554421111 11111222222222 1235899999999999999999988889
Q ss_pred eeeEEEeccccccCC
Q 025629 85 WSGAILVAPMCKIAD 99 (250)
Q Consensus 85 v~~lvl~~~~~~~~~ 99 (250)
+++++...+......
T Consensus 126 LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 126 LKAIVPQSGWSDLYR 140 (272)
T ss_dssp EEEEEEESE-SBTCC
T ss_pred ceEEEecccCCcccc
Confidence 999999887765544
No 135
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.60 E-value=3.4e-07 Score=66.70 Aligned_cols=76 Identities=16% Similarity=0.143 Sum_probs=61.5
Q ss_pred ccccccchhhHHHhhHHhhhh----------hhhhhhchHhHH-------------------HHhhccCCCCcEEEEEec
Q 025629 18 WHHLDTEFSLWITLDLAFQQV----------FMATFPALTGWL-------------------MMSSSIIPTSKVFLFGQS 68 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~~----------~~~~~~d~~~~~-------------------~~~~~~~~~~~~~lvGhS 68 (250)
.||++++.+++..+++.|.+. +.|+.+.+++.+ ..++-+++..++.|-|-.
T Consensus 158 ~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRLg~nkffiqGgD 237 (469)
T KOG2565|consen 158 LHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRLGYNKFFIQGGD 237 (469)
T ss_pred ecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHhCcceeEeecCc
Confidence 699999999999999988654 345545554444 566777899999999999
Q ss_pred cchHHHHHHHhhCCCceeeEEEecc
Q 025629 69 LGGAVALKVHLKQPNAWSGAILVAP 93 (250)
Q Consensus 69 ~Gg~~a~~~a~~~p~~v~~lvl~~~ 93 (250)
||+.|+..+|..+|++|.|+=+-.+
T Consensus 238 wGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 238 WGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred hHHHHHHHHHhhcchhhhHhhhccc
Confidence 9999999999999999988765443
No 136
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.59 E-value=3.7e-07 Score=55.70 Aligned_cols=60 Identities=23% Similarity=0.309 Sum_probs=52.6
Q ss_pred CCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 177 SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
..|+|++.++.|+.+|.+.++.+.+.+ ++++++.+++.||..+.....- +.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l--~~s~lvt~~g~gHg~~~~~s~C----~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL--PGSRLVTVDGAGHGVYAGGSPC----VDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC--CCceEEEEeccCcceecCCChH----HHHHHHHHHHc
Confidence 589999999999999999999999999 7799999999999988633333 78888899875
No 137
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.56 E-value=4.1e-06 Score=62.41 Aligned_cols=168 Identities=14% Similarity=0.143 Sum_probs=85.5
Q ss_pred hhchHhHHHHhhcc---C--CCCcEEEEEeccchHHHHHHHhhCCC----ceeeEEEeccccccCCCCCCHHHHHHHHHH
Q 025629 43 FPALTGWLMMSSSI---I--PTSKVFLFGQSLGGAVALKVHLKQPN----AWSGAILVAPMCKIADDMVPPFLVKQILIG 113 (250)
Q Consensus 43 ~~d~~~~~~~~~~~---~--~~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 113 (250)
++|..+.+..+.++ + +.+++.++|+|.||.+++.++..-.+ ...+.+++.|...... .....
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~-------- 200 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASL-------- 200 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccch--------
Confidence 44444444444444 2 36789999999999999998876432 4788999999876443 10000
Q ss_pred HhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccCh
Q 025629 114 IANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDP 193 (250)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~ 193 (250)
.. ...............+............. .... ....+.+.. -.|++++.|+.|.+.+
T Consensus 201 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~s--------------pl~~~~~~~-lPP~~i~~a~~D~l~~- 260 (312)
T COG0657 201 -PG-YGEADLLDAAAILAWFADLYLGAAPDRED--PEAS--------------PLASDDLSG-LPPTLIQTAEFDPLRD- 260 (312)
T ss_pred -hh-cCCccccCHHHHHHHHHHHhCcCccccCC--CccC--------------ccccccccC-CCCEEEEecCCCcchh-
Confidence 00 00000000000000000000000000000 0000 000011334 4689999999999987
Q ss_pred HHHHHHHHHhC--CCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHh
Q 025629 194 SVSKALYEKAS--SKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 241 (250)
Q Consensus 194 ~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 241 (250)
....+.+++. +..+++..+++..|.+..-...+ ...-...+.+|+.
T Consensus 261 -~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~~~-a~~~~~~~~~~l~ 308 (312)
T COG0657 261 -EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTGPE-ARSALRQIAAFLR 308 (312)
T ss_pred -HHHHHHHHHHHcCCeEEEEEeCCcceeccccCcHH-HHHHHHHHHHHHH
Confidence 4444444442 24578899999999765444322 2234566777776
No 138
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.54 E-value=1.8e-06 Score=60.11 Aligned_cols=170 Identities=12% Similarity=0.074 Sum_probs=87.2
Q ss_pred cCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhc
Q 025629 56 IIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFR 135 (250)
Q Consensus 56 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (250)
..+..++.++|-||||.+|......++..|+-+=++++....... . ...+......+.+....... .....+
T Consensus 191 ~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~-t-eg~l~~~~s~~~~~~~~t~~------~~~~~r 262 (371)
T KOG1551|consen 191 ADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSA-T-EGLLLQDTSKMKRFNQTTNK------SGYTSR 262 (371)
T ss_pred ccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhh-h-hhhhhhhhHHHHhhccCcch------hhhhhh
Confidence 346789999999999999999999887666555454443211110 0 00111111122222211100 000000
Q ss_pred ccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCC-----EEEEeeCCCcccChHHHHHHHHHhCCCCcEE
Q 025629 136 DLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLP-----LLILHGENDTVTDPSVSKALYEKASSKDKKC 210 (250)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-----vl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (250)
.+. ......... .....-.....+++..-+-...+.+..+| +.++.+++|..+|......+.+.. |++++
T Consensus 263 ~p~-Q~~~~~~~~--~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~W--Pg~eV 337 (371)
T KOG1551|consen 263 NPA-QSYHLLSKE--QSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIW--PGCEV 337 (371)
T ss_pred Cch-hhHHHHHHH--hhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhC--CCCEE
Confidence 000 000000000 00001112222222221211233333333 567789999999998888888888 99999
Q ss_pred EEeCCCCcc-cccCCchHHHHHHHHHHHHHHhhc
Q 025629 211 ILYKDAFHS-LLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 211 ~~~~~~gH~-~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
..++ +||. .++.+.+. +-++|.+-|++.
T Consensus 338 r~~e-gGHVsayl~k~dl----fRR~I~d~L~R~ 366 (371)
T KOG1551|consen 338 RYLE-GGHVSAYLFKQDL----FRRAIVDGLDRL 366 (371)
T ss_pred EEee-cCceeeeehhchH----HHHHHHHHHHhh
Confidence 9998 7884 45566777 566666666554
No 139
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.52 E-value=2.6e-07 Score=67.71 Aligned_cols=57 Identities=21% Similarity=0.149 Sum_probs=44.9
Q ss_pred HhccCCCCCEEEEeeCCCcccChHH-HHHHHHHhCCCCcEEEEeCCCCcccccCCchH
Q 025629 171 RRLEKVSLPLLILHGENDTVTDPSV-SKALYEKASSKDKKCILYKDAFHSLLEGEPDD 227 (250)
Q Consensus 171 ~~~~~i~~Pvl~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 227 (250)
..+.+++.|++++.|..|.+.|+.. .......+.++...+.+++++.|.-+++-..+
T Consensus 245 tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 245 TGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred ccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 5677899999999999999877553 45556666545567889999999999887665
No 140
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.51 E-value=3.9e-07 Score=64.47 Aligned_cols=38 Identities=24% Similarity=0.354 Sum_probs=34.7
Q ss_pred CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEecccc
Q 025629 58 PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 95 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 95 (250)
+..+++++|.|+||+-++.++.++|+.+.+.+++++..
T Consensus 267 D~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 267 DRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred ccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 34689999999999999999999999999999998854
No 141
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.50 E-value=2.4e-06 Score=59.44 Aligned_cols=46 Identities=20% Similarity=0.254 Sum_probs=37.5
Q ss_pred HHhhccC--CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 51 MMSSSII--PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 51 ~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
..+..+. +..+|++.|+|.||+++..++..+|+.+.++...++...
T Consensus 86 ~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 86 DYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred HhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 3344444 456899999999999999999999999999888877643
No 142
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.50 E-value=4e-07 Score=61.59 Aligned_cols=56 Identities=21% Similarity=0.140 Sum_probs=43.4
Q ss_pred hhchHhHHHHhhccCCC----CcEEEEEeccchHHHHHHHhh--CCCceeeEEEeccccccC
Q 025629 43 FPALTGWLMMSSSIIPT----SKVFLFGQSLGGAVALKVHLK--QPNAWSGAILVAPMCKIA 98 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~----~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~~~ 98 (250)
+.+-++++..+++++.. ..|+|+|||.|+.=.+.|..+ .|..|++.|+.+|.....
T Consensus 86 lk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 86 LKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 66777788888886643 489999999999999988732 455688889999877644
No 143
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.49 E-value=2.8e-06 Score=59.22 Aligned_cols=80 Identities=23% Similarity=0.282 Sum_probs=51.6
Q ss_pred ccccccchhhHHHhhHHhhhh-hhhhh------------------hchHhHHHHhhcc-------CCCCcEEEEEeccch
Q 025629 18 WHHLDTEFSLWITLDLAFQQV-FMATF------------------PALTGWLMMSSSI-------IPTSKVFLFGQSLGG 71 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~~-~~~~~------------------~d~~~~~~~~~~~-------~~~~~~~lvGhS~Gg 71 (250)
.||+......+..+...++.+ |-++. ....+|+..-+.+ -+..++.++|||.||
T Consensus 52 ~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGG 131 (307)
T PF07224_consen 52 LHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGG 131 (307)
T ss_pred eechhhhhHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCcc
Confidence 477777666666777777666 33331 1112222111111 134689999999999
Q ss_pred HHHHHHHhhCC--CceeeEEEecccccc
Q 025629 72 AVALKVHLKQP--NAWSGAILVAPMCKI 97 (250)
Q Consensus 72 ~~a~~~a~~~p--~~v~~lvl~~~~~~~ 97 (250)
-.|..+|..+. -+++++|.++|....
T Consensus 132 ktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 132 KTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred HHHHHHHhcccccCchhheecccccCCC
Confidence 99999998774 248899999987653
No 144
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.46 E-value=8.2e-06 Score=63.71 Aligned_cols=63 Identities=16% Similarity=0.143 Sum_probs=49.4
Q ss_pred CCCEEEEeeCCCcccChHHHHHHHHHhC----------------------------CC-----CcEEEEeCCCCcccccC
Q 025629 177 SLPLLILHGENDTVTDPSVSKALYEKAS----------------------------SK-----DKKCILYKDAFHSLLEG 223 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~----------------------------~~-----~~~~~~~~~~gH~~~~~ 223 (250)
.++||+..|+.|.+++....+++.+.+. .. +.+++.+.++||+++.+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 5899999999999998766655554432 01 45667778999999999
Q ss_pred CchHHHHHHHHHHHHHHhhc
Q 025629 224 EPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 224 ~~~~~~~~~~~~i~~fl~~~ 243 (250)
+|+. +.+.+..|+...
T Consensus 444 ~P~~----~~~~i~~fl~~~ 459 (462)
T PTZ00472 444 QPAV----ALTMINRFLRNR 459 (462)
T ss_pred HHHH----HHHHHHHHHcCC
Confidence 9998 889999998753
No 145
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.43 E-value=6.8e-06 Score=56.48 Aligned_cols=78 Identities=14% Similarity=0.019 Sum_probs=43.8
Q ss_pred cccccccccchhhHHHhhHHhhhhhhhh-hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEecc
Q 025629 15 QGSWHHLDTEFSLWITLDLAFQQVFMAT-FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAP 93 (250)
Q Consensus 15 ~g~~hg~~~~~~~~~~~~~~l~~~~~~~-~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 93 (250)
.--+.|+|++...+..+.. ...+.++ .-|+.+.-.+. +-.+.+.+.|||+|||-.+|..+....| ++..|.+++
T Consensus 14 ilfF~GWg~d~~~f~hL~~--~~~~D~l~~yDYr~l~~d~-~~~~y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAING 88 (213)
T PF04301_consen 14 ILFFAGWGMDPSPFSHLIL--PENYDVLICYDYRDLDFDF-DLSGYREIYLVAWSMGVWAANRVLQGIP--FKRAIAING 88 (213)
T ss_pred EEEEecCCCChHHhhhccC--CCCccEEEEecCccccccc-ccccCceEEEEEEeHHHHHHHHHhccCC--cceeEEEEC
Confidence 3446777777766554421 1222222 11221111111 1234679999999999999988876554 666666665
Q ss_pred cccc
Q 025629 94 MCKI 97 (250)
Q Consensus 94 ~~~~ 97 (250)
...+
T Consensus 89 T~~P 92 (213)
T PF04301_consen 89 TPYP 92 (213)
T ss_pred CCCC
Confidence 5443
No 146
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.41 E-value=3e-06 Score=59.21 Aligned_cols=42 Identities=19% Similarity=0.179 Sum_probs=33.4
Q ss_pred hccCCCCcEEEEEeccchHHHHHHHhh---CCCceeeEEEecccc
Q 025629 54 SSIIPTSKVFLFGQSLGGAVALKVHLK---QPNAWSGAILVAPMC 95 (250)
Q Consensus 54 ~~~~~~~~~~lvGhS~Gg~~a~~~a~~---~p~~v~~lvl~~~~~ 95 (250)
.+..+..+++++|||+||.++...+.+ .++.+.+++++++..
T Consensus 58 ~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 58 LRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 344456789999999999999988875 456789999888654
No 147
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.38 E-value=4.8e-06 Score=59.56 Aligned_cols=43 Identities=21% Similarity=0.285 Sum_probs=32.9
Q ss_pred hhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 53 SSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 53 ~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
+...+...++.++|||+||+.+....+.+. .+++.|+++.+..
T Consensus 234 ~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~WM~ 276 (399)
T KOG3847|consen 234 LKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAWMF 276 (399)
T ss_pred Hhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeeeec
Confidence 333444468999999999999998877665 4888888887654
No 148
>PLN02606 palmitoyl-protein thioesterase
Probab=98.27 E-value=3.6e-05 Score=55.59 Aligned_cols=36 Identities=14% Similarity=-0.042 Sum_probs=31.6
Q ss_pred CcEEEEEeccchHHHHHHHhhCCC--ceeeEEEecccc
Q 025629 60 SKVFLFGQSLGGAVALKVHLKQPN--AWSGAILVAPMC 95 (250)
Q Consensus 60 ~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~ 95 (250)
.-+.++|+|.||.++-.++.+.|+ .|+.+|.++++-
T Consensus 95 ~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 359999999999999999999876 599999998753
No 149
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.24 E-value=1.1e-06 Score=59.00 Aligned_cols=56 Identities=30% Similarity=0.480 Sum_probs=42.2
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccC
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 98 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 98 (250)
..++++.+..-.-.+...++.+.||||||.=|+..+.+.|.+.+++-..+|...+.
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPI 179 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcc
Confidence 45555555543334455679999999999999999999999988888888766543
No 150
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.20 E-value=6.7e-06 Score=57.65 Aligned_cols=62 Identities=18% Similarity=0.055 Sum_probs=40.3
Q ss_pred ccccccchhhHHHhhHHhhh---hh---hhh------------------hhchHhHHHHhhccCCC--CcEEEEEeccch
Q 025629 18 WHHLDTEFSLWITLDLAFQQ---VF---MAT------------------FPALTGWLMMSSSIIPT--SKVFLFGQSLGG 71 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~---~~---~~~------------------~~d~~~~~~~~~~~~~~--~~~~lvGhS~Gg 71 (250)
.||+.++..+|..+...+.. .+ +++ ...+++.+...++.... .++.+|||||||
T Consensus 10 vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGG 89 (217)
T PF05057_consen 10 VHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISFIGHSLGG 89 (217)
T ss_pred eCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceEEEecccH
Confidence 47777777777766655555 11 111 34455555555555554 489999999999
Q ss_pred HHHHHHHh
Q 025629 72 AVALKVHL 79 (250)
Q Consensus 72 ~~a~~~a~ 79 (250)
.++-.+..
T Consensus 90 li~r~al~ 97 (217)
T PF05057_consen 90 LIARYALG 97 (217)
T ss_pred HHHHHHHH
Confidence 99976654
No 151
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.18 E-value=4.5e-06 Score=55.26 Aligned_cols=50 Identities=24% Similarity=0.213 Sum_probs=36.5
Q ss_pred HhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCC----ceeeEEEeccccc
Q 025629 47 TGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPN----AWSGAILVAPMCK 96 (250)
Q Consensus 47 ~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~ 96 (250)
...+.....+.+..+++++|||+||.+|..++...+. .+..++.++++..
T Consensus 15 ~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 15 LPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 3334444444678899999999999999999887654 4666777776553
No 152
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.17 E-value=4.3e-05 Score=55.24 Aligned_cols=35 Identities=20% Similarity=0.019 Sum_probs=31.3
Q ss_pred CcEEEEEeccchHHHHHHHhhCCC--ceeeEEEeccc
Q 025629 60 SKVFLFGQSLGGAVALKVHLKQPN--AWSGAILVAPM 94 (250)
Q Consensus 60 ~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~ 94 (250)
.-++++|+|.||.++-.++.+.|+ .|+.+|.++++
T Consensus 94 ~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 359999999999999999999886 59999999865
No 153
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.17 E-value=8.3e-06 Score=60.56 Aligned_cols=38 Identities=16% Similarity=0.247 Sum_probs=28.1
Q ss_pred CCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEecccc
Q 025629 57 IPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 95 (250)
Q Consensus 57 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 95 (250)
...++|.++|+||||..++.+++..+ +|++.|..+-..
T Consensus 223 VD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~~l~ 260 (390)
T PF12715_consen 223 VDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANGYLC 260 (390)
T ss_dssp EEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES-B-
T ss_pred cCccceEEEeecccHHHHHHHHHcch-hhHhHhhhhhhh
Confidence 34579999999999999999999866 798888776544
No 154
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.14 E-value=5.9e-06 Score=57.42 Aligned_cols=36 Identities=22% Similarity=0.263 Sum_probs=28.5
Q ss_pred hchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhh
Q 025629 44 PALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
.++..++..+++..+. +|.||||||||.++..+...
T Consensus 60 ~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 60 KQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHH
Confidence 4677777788888888 99999999999999988754
No 155
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.07 E-value=1.2e-05 Score=61.56 Aligned_cols=38 Identities=26% Similarity=0.225 Sum_probs=33.1
Q ss_pred CCcEEEEEeccchHHHHHHHhhCCC------ceeeEEEeccccc
Q 025629 59 TSKVFLFGQSLGGAVALKVHLKQPN------AWSGAILVAPMCK 96 (250)
Q Consensus 59 ~~~~~lvGhS~Gg~~a~~~a~~~p~------~v~~lvl~~~~~~ 96 (250)
.++|+|+||||||.++..+....+. .|+++|.++++..
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 6899999999999999999887643 5999999998754
No 156
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=98.06 E-value=3.5e-05 Score=53.99 Aligned_cols=50 Identities=18% Similarity=0.156 Sum_probs=38.2
Q ss_pred HhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhC----CCceeeEEEecccccc
Q 025629 47 TGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQ----PNAWSGAILVAPMCKI 97 (250)
Q Consensus 47 ~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~----p~~v~~lvl~~~~~~~ 97 (250)
...+..+++..+. ++++.|||.||.+|..++... .++|.+++..+++...
T Consensus 72 ~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 72 LAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 4445556666554 599999999999999998873 3578999988877643
No 157
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.00 E-value=0.00024 Score=56.37 Aligned_cols=92 Identities=13% Similarity=0.096 Sum_probs=65.0
Q ss_pred hhhhhhhhccccccccccchhhHHHhhHHhhhhhhhhhhchHhHHHHhhccC--CCCcEEEEEeccchHHHHHHHhhCCC
Q 025629 6 LAHFSLKELQGSWHHLDTEFSLWITLDLAFQQVFMATFPALTGWLMMSSSII--PTSKVFLFGQSLGGAVALKVHLKQPN 83 (250)
Q Consensus 6 ~~~~G~g~~~g~~hg~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~ 83 (250)
|-.+|+=--.---.|-+.=...|..-...+.+.-. +.|+.+....++++- ..+.++++|-|.||++....+...|+
T Consensus 473 LlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NT--f~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~ 550 (682)
T COG1770 473 LLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNT--FTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPD 550 (682)
T ss_pred eecCceEEEEEEeecccccChHHHHhhhhhhcccc--HHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChh
Confidence 33444433333344555555677666666655433 567777777777654 24579999999999999999999999
Q ss_pred ceeeEEEeccccccCC
Q 025629 84 AWSGAILVAPMCKIAD 99 (250)
Q Consensus 84 ~v~~lvl~~~~~~~~~ 99 (250)
.++++|+-.|+.....
T Consensus 551 lf~~iiA~VPFVDvlt 566 (682)
T COG1770 551 LFAGIIAQVPFVDVLT 566 (682)
T ss_pred hhhheeecCCccchhh
Confidence 9999999999876543
No 158
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.00 E-value=0.00015 Score=53.69 Aligned_cols=127 Identities=13% Similarity=0.206 Sum_probs=84.3
Q ss_pred HhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCC-ceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccC
Q 025629 47 TGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPN-AWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVP 125 (250)
Q Consensus 47 ~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (250)
.+.+..+....+..+++|+||+.|+..+..+....+. .++++|++++.......
T Consensus 180 i~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~------------------------- 234 (310)
T PF12048_consen 180 IEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDR------------------------- 234 (310)
T ss_pred HHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchh-------------------------
Confidence 3344556666777789999999999999999988764 58999999996532110
Q ss_pred cchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhccCCCCCEEEEeeCCCcccChH--HHHHHHHHh
Q 025629 126 QKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPS--VSKALYEKA 203 (250)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~--~~~~~~~~~ 203 (250)
...+.+.+.++++|||=|++.+...+-.. ..+...++.
T Consensus 235 ----------------------------------------n~~l~~~la~l~iPvLDi~~~~~~~~~~~a~~R~~~a~r~ 274 (310)
T PF12048_consen 235 ----------------------------------------NPALAEQLAQLKIPVLDIYSADNPASQQTAKQRKQAAKRN 274 (310)
T ss_pred ----------------------------------------hhhHHHHhhccCCCEEEEecCCChHHHHHHHHHHHHHHhc
Confidence 01455677788999999998874332211 122333333
Q ss_pred CCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhc
Q 025629 204 SSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 204 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
..++.+-+.+.+..|.... .. +.+.+.|..|++++
T Consensus 275 ~~~~YrQ~~L~~~~~~~~~-~~----~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 275 KKPDYRQIQLPGLPDNPSG-WQ----EQLLRRIRGWLKRH 309 (310)
T ss_pred cCCCceeEecCCCCCChhh-HH----HHHHHHHHHHHHhh
Confidence 3355666677766654422 11 23899999999875
No 159
>COG0627 Predicted esterase [General function prediction only]
Probab=97.98 E-value=0.00015 Score=53.51 Aligned_cols=61 Identities=21% Similarity=0.175 Sum_probs=44.8
Q ss_pred hhhhhhchHhHHHHhhccCCC-CcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCC
Q 025629 39 FMATFPALTGWLMMSSSIIPT-SKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIAD 99 (250)
Q Consensus 39 ~~~~~~d~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 99 (250)
+..+..+++..+.+.-..... ++-.++||||||.=|+.+|.++|++++.+...+|......
T Consensus 130 ~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~ 191 (316)
T COG0627 130 ETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSS 191 (316)
T ss_pred hHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccc
Confidence 344455666555443332221 3678999999999999999999999999999998876553
No 160
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.98 E-value=8.1e-05 Score=54.96 Aligned_cols=73 Identities=29% Similarity=0.450 Sum_probs=55.9
Q ss_pred HhccCCC-CCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhcC
Q 025629 171 RRLEKVS-LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 171 ~~~~~i~-~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 244 (250)
..+.++. +|+|+++|.+|..+|......+++.......+...+++++|......+. ...+..+.+.+|+.+.+
T Consensus 225 ~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 225 DDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPP-AVEQALDKLAEFLERHL 298 (299)
T ss_pred hhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccH-HHHHHHHHHHHHHHHhc
Confidence 4444554 7999999999999999999999988853357888889999988764333 12237888999998764
No 161
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.96 E-value=0.00032 Score=50.26 Aligned_cols=62 Identities=18% Similarity=0.159 Sum_probs=48.4
Q ss_pred CCCCCEEEEeeCCCcccChHHHHHHHHHhCC--CCcEEEEeCCCCccccc-CCchHHHHHHHHHHHHHH
Q 025629 175 KVSLPLLILHGENDTVTDPSVSKALYEKASS--KDKKCILYKDAFHSLLE-GEPDDMIIRVFADIISWL 240 (250)
Q Consensus 175 ~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~i~~fl 240 (250)
..++|-|+++++.|.+++.+..++..+.... -+++...++++.|..++ .+|++ ..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~----Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDR----YWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHH----HHHHHHhhC
Confidence 4468999999999999999888777765532 34788889999997765 56666 788887774
No 162
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.92 E-value=2.2e-05 Score=56.65 Aligned_cols=36 Identities=25% Similarity=0.383 Sum_probs=33.6
Q ss_pred EEEEEeccchHHHHHHHhhCCCceeeEEEecccccc
Q 025629 62 VFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 97 (250)
Q Consensus 62 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 97 (250)
..|+|+||||..|+.++.++|+.+.+++.++|....
T Consensus 117 ~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp EEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred eEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 799999999999999999999999999999987653
No 163
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.90 E-value=2.2e-05 Score=51.07 Aligned_cols=38 Identities=24% Similarity=0.308 Sum_probs=31.1
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhh
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
...+.+.+..+.++.+..++++.|||+||.+|..++..
T Consensus 47 ~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 44566677777777777899999999999999988865
No 164
>COG3150 Predicted esterase [General function prediction only]
Probab=97.88 E-value=0.00046 Score=45.00 Aligned_cols=51 Identities=18% Similarity=0.142 Sum_probs=40.5
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
.......+..++.+.+.+...|||-|+||+.|..++.++. + +.|+++|...
T Consensus 42 p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--i-rav~~NPav~ 92 (191)
T COG3150 42 PQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--I-RAVVFNPAVR 92 (191)
T ss_pred HHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--C-hhhhcCCCcC
Confidence 5556667777888888788999999999999999999886 4 3466777664
No 165
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.84 E-value=6.2e-05 Score=56.48 Aligned_cols=54 Identities=17% Similarity=0.063 Sum_probs=46.5
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCC--CceeeEEEeccccc
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQP--NAWSGAILVAPMCK 96 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~ 96 (250)
.+.+...+.+++...+.+++.|+||||||.++..++...+ .+|+.++.++++-.
T Consensus 110 ~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 110 GEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 5566667777888888899999999999999999998888 88999999998754
No 166
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.81 E-value=3.7e-05 Score=54.63 Aligned_cols=53 Identities=23% Similarity=0.244 Sum_probs=36.4
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhC-----CCceeeEEEecccc
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQ-----PNAWSGAILVAPMC 95 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~ 95 (250)
..+....+...+++.+..++++.|||+||.+|..++... +..+..+..-+|..
T Consensus 111 ~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 111 YNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 444555566666667788999999999999999888752 33455444444443
No 167
>PLN00413 triacylglycerol lipase
Probab=97.70 E-value=5.5e-05 Score=57.91 Aligned_cols=35 Identities=37% Similarity=0.411 Sum_probs=29.5
Q ss_pred chHhHHHHhhccCCCCcEEEEEeccchHHHHHHHh
Q 025629 45 ALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 45 d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
++...+..+++..+..++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45566777788888889999999999999999875
No 168
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.68 E-value=0.00094 Score=48.04 Aligned_cols=35 Identities=14% Similarity=0.034 Sum_probs=27.7
Q ss_pred CcEEEEEeccchHHHHHHHhhCCC-ceeeEEEeccc
Q 025629 60 SKVFLFGQSLGGAVALKVHLKQPN-AWSGAILVAPM 94 (250)
Q Consensus 60 ~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~ 94 (250)
.-++++|+|.||.++-.++.+.|+ .|+-+|.++++
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 469999999999999999999864 69999999865
No 169
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.68 E-value=8.8e-05 Score=52.45 Aligned_cols=39 Identities=26% Similarity=0.416 Sum_probs=35.0
Q ss_pred CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 58 PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
+.++-.++|||+||.+++.....+|+.+...++++|...
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 445689999999999999999999999999999999763
No 170
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.68 E-value=0.00029 Score=49.99 Aligned_cols=54 Identities=22% Similarity=0.309 Sum_probs=40.5
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhh----CC-----CceeeEEEeccccc
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLK----QP-----NAWSGAILVAPMCK 96 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~----~p-----~~v~~lvl~~~~~~ 96 (250)
.+.+...+..+.+..+.++++|++||||+.+.+..... .+ .++..+|+.+|-..
T Consensus 76 ~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 76 GPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred HHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 45566666666666678999999999999999987643 21 36788889888654
No 171
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=97.68 E-value=0.00011 Score=60.43 Aligned_cols=79 Identities=19% Similarity=0.052 Sum_probs=52.6
Q ss_pred ccccccchhhHHHhhHHhhh-hhhhhhhch-----------------------------------------HhHHHHhhc
Q 025629 18 WHHLDTEFSLWITLDLAFQQ-VFMATFPAL-----------------------------------------TGWLMMSSS 55 (250)
Q Consensus 18 ~hg~~~~~~~~~~~~~~l~~-~~~~~~~d~-----------------------------------------~~~~~~~~~ 55 (250)
.||++.+...|..+...|.. .|+++..|+ +.|+..++.
T Consensus 455 lHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~ 534 (792)
T TIGR03502 455 QHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRL 534 (792)
T ss_pred eCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHH
Confidence 69999999999988888874 466663332 223333333
Q ss_pred cC----------------CCCcEEEEEeccchHHHHHHHhhCCC-----------ceeeEEEeccccc
Q 025629 56 II----------------PTSKVFLFGQSLGGAVALKVHLKQPN-----------AWSGAILVAPMCK 96 (250)
Q Consensus 56 ~~----------------~~~~~~lvGhS~Gg~~a~~~a~~~p~-----------~v~~lvl~~~~~~ 96 (250)
.+ +..+++++||||||.++..++..... ++.+..+..|...
T Consensus 535 ~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an~~~~~~~~~~l~~~~~a~l~~pgGg 602 (792)
T TIGR03502 535 SLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYANTPLGSPTADALYAVNAASLQNPGGG 602 (792)
T ss_pred HHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcCccccCCccccccccceeeeecCCcc
Confidence 33 24689999999999999999875221 3456666655543
No 172
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.66 E-value=0.0056 Score=46.19 Aligned_cols=56 Identities=23% Similarity=0.307 Sum_probs=41.2
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhh--CC---CceeeEEEeccccccC
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLK--QP---NAWSGAILVAPMCKIA 98 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~--~p---~~v~~lvl~~~~~~~~ 98 (250)
+.+..+-...+++..+.++++|+|-|.||.+++.+... .+ ...+++|+++|+....
T Consensus 178 L~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 178 LRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 33444444667766788999999999999999987643 11 1357999999998765
No 173
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.65 E-value=0.00015 Score=54.13 Aligned_cols=42 Identities=21% Similarity=0.229 Sum_probs=33.2
Q ss_pred CCCCcEEEEEeccchHHHHHHHhhCCC--ceeeEEEeccccccC
Q 025629 57 IPTSKVFLFGQSLGGAVALKVHLKQPN--AWSGAILVAPMCKIA 98 (250)
Q Consensus 57 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~ 98 (250)
.+.++++|||||+||.+|-.++..... +|.+++.++|+...-
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 456899999999999999999988777 899999999987643
No 174
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.63 E-value=0.00011 Score=56.61 Aligned_cols=37 Identities=24% Similarity=0.365 Sum_probs=34.0
Q ss_pred CCcEEEEEeccchHHHHHHHhhCCCceeeEEEecccc
Q 025629 59 TSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 95 (250)
Q Consensus 59 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 95 (250)
.++.+|+|+||||..|+.++.++|+++.+++.+++..
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 4578999999999999999999999999999999864
No 175
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.62 E-value=0.00019 Score=48.15 Aligned_cols=54 Identities=19% Similarity=0.172 Sum_probs=41.3
Q ss_pred hhchHhHHHHhhccC-CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 43 FPALTGWLMMSSSII-PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
.+++..++..+.... +..++.++|||+|+.++-..+...+..++.+|+++++..
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 445555555555555 566899999999999999988876778999999987653
No 176
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.56 E-value=0.0029 Score=46.61 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=24.6
Q ss_pred HhHHHHhhccC---CCCcEEEEEeccchHHHHHHHhhC
Q 025629 47 TGWLMMSSSII---PTSKVFLFGQSLGGAVALKVHLKQ 81 (250)
Q Consensus 47 ~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~ 81 (250)
...+..+.++. +.+++++.|||+||.++..++.++
T Consensus 199 ~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 199 QACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 33344444433 347899999999999999876654
No 177
>PLN02162 triacylglycerol lipase
Probab=97.51 E-value=0.00023 Score=54.51 Aligned_cols=35 Identities=29% Similarity=0.244 Sum_probs=28.2
Q ss_pred chHhHHHHhhccCCCCcEEEEEeccchHHHHHHHh
Q 025629 45 ALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 45 d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
.+.+.+..++.+.+..++++.|||+||.+|..+|.
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 44556666777777789999999999999998765
No 178
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.38 E-value=0.00024 Score=56.03 Aligned_cols=40 Identities=13% Similarity=-0.007 Sum_probs=30.7
Q ss_pred cCCCCcEEEEEeccchHHHHHHHhhCC---------------CceeeEEEecccc
Q 025629 56 IIPTSKVFLFGQSLGGAVALKVHLKQP---------------NAWSGAILVAPMC 95 (250)
Q Consensus 56 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p---------------~~v~~lvl~~~~~ 95 (250)
..+.++|+|+||||||.+++.+...-. ..|++.|.++++.
T Consensus 209 ~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 209 TNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 344689999999999999999875321 2478899988764
No 179
>PLN02454 triacylglycerol lipase
Probab=97.34 E-value=0.00044 Score=52.49 Aligned_cols=38 Identities=21% Similarity=0.191 Sum_probs=29.2
Q ss_pred hhchHhHHHHhhccCCCCc--EEEEEeccchHHHHHHHhh
Q 025629 43 FPALTGWLMMSSSIIPTSK--VFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~--~~lvGhS~Gg~~a~~~a~~ 80 (250)
.+++...+..+++..+..+ +++.|||+||.+|+.+|..
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3455566677777776554 9999999999999998854
No 180
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.27 E-value=0.0015 Score=51.49 Aligned_cols=183 Identities=14% Similarity=0.067 Sum_probs=101.1
Q ss_pred cccccchhhHHHhhHHhhhhhhhhhhchHhHHHHhhccC--CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 19 HHLDTEFSLWITLDLAFQQVFMATFPALTGWLMMSSSII--PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 19 hg~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
.|-+.-...|....... .-.-+++|+......++++- ..+++.+-|-|-||.+......++|+.+.++|+--|...
T Consensus 459 RGGGEfGp~WH~Aa~k~--nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllD 536 (648)
T COG1505 459 RGGGEFGPEWHQAGMKE--NKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLD 536 (648)
T ss_pred ccCCccCHHHHHHHhhh--cchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhh
Confidence 34444444554333221 12233677777777777663 235789999999999999999999999988887777654
Q ss_pred cCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhhhhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHHHHhcc--
Q 025629 97 IADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLE-- 174 (250)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 174 (250)
... +..+... .....-+.++...+ - ...+.....+ ..++
T Consensus 537 MlR--------------Yh~l~aG-------~sW~~EYG~Pd~P~--------------d---~~~l~~YSPy-~nl~~g 577 (648)
T COG1505 537 MLR--------------YHLLTAG-------SSWIAEYGNPDDPE--------------D---RAFLLAYSPY-HNLKPG 577 (648)
T ss_pred hhh--------------hcccccc-------hhhHhhcCCCCCHH--------------H---HHHHHhcCch-hcCCcc
Confidence 211 0000000 00001111111110 0 0011111011 1222
Q ss_pred CCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCc--EEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhcC
Q 025629 175 KVSLPLLILHGENDTVTDPSVSKALYEKASSKDK--KCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 175 ~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~--~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 244 (250)
+.-.|+||-.+.+|.-|.|.+++.++.++...+. -+.+=.++||..--...+. ..-...+..||.+.+
T Consensus 578 ~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~--A~~~a~~~afl~r~L 647 (648)
T COG1505 578 QKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEI--ARELADLLAFLLRTL 647 (648)
T ss_pred ccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHH--HHHHHHHHHHHHHhh
Confidence 1235899999999999999999998888743223 3333347899876433221 224455667777654
No 181
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.26 E-value=0.0029 Score=45.77 Aligned_cols=37 Identities=27% Similarity=0.375 Sum_probs=32.8
Q ss_pred CcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 60 SKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 60 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
..-+|.|-|+||.+++..+..+|+++-.++..+|...
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 3468999999999999999999999999998888654
No 182
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.18 E-value=0.00069 Score=45.96 Aligned_cols=54 Identities=17% Similarity=0.172 Sum_probs=41.9
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhh--C----CCceeeEEEeccccc
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLK--Q----PNAWSGAILVAPMCK 96 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~--~----p~~v~~lvl~~~~~~ 96 (250)
..++...+......-+..+++|+|+|.|+.++..++.. . .++|.++|+++-+..
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 44555556666677788899999999999999999877 2 357999999986654
No 183
>PLN02571 triacylglycerol lipase
Probab=97.16 E-value=0.0005 Score=52.26 Aligned_cols=37 Identities=16% Similarity=0.118 Sum_probs=28.4
Q ss_pred hchHhHHHHhhccCCCC--cEEEEEeccchHHHHHHHhh
Q 025629 44 PALTGWLMMSSSIIPTS--KVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~ 80 (250)
+++...+..+++..+.. ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45556666777766543 68999999999999998864
No 184
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.15 E-value=0.005 Score=49.07 Aligned_cols=55 Identities=18% Similarity=0.225 Sum_probs=44.7
Q ss_pred hhchHhHHHHhhccC--CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEecccccc
Q 025629 43 FPALTGWLMMSSSII--PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 97 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 97 (250)
+.|+......+++.- ...+..+.|.|.||.++..++..+|+.+.++|+-.|+...
T Consensus 530 f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDv 586 (712)
T KOG2237|consen 530 FDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDV 586 (712)
T ss_pred HHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceeh
Confidence 566666666666653 3568999999999999999999999999999988887653
No 185
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.13 E-value=0.0017 Score=52.89 Aligned_cols=37 Identities=24% Similarity=0.268 Sum_probs=26.9
Q ss_pred CcEEEEEeccchHHHHHHHhh---CCCceeeEEEeccccc
Q 025629 60 SKVFLFGQSLGGAVALKVHLK---QPNAWSGAILVAPMCK 96 (250)
Q Consensus 60 ~~~~lvGhS~Gg~~a~~~a~~---~p~~v~~lvl~~~~~~ 96 (250)
..|++|||||||.+|...+.. .++.|.-++..+++-.
T Consensus 182 ~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 182 HSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred ceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 459999999999999887653 2445666666665543
No 186
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=97.09 E-value=0.0014 Score=44.12 Aligned_cols=66 Identities=20% Similarity=0.260 Sum_probs=50.7
Q ss_pred CCCEEEEeeCCCcccChHHHHHHHHHh---CCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhc
Q 025629 177 SLPLLILHGENDTVTDPSVSKALYEKA---SSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
++++|-|-|+.|.++.+.+.....+.+ +......++.+++||+..+. ...+++++...|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~-G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFN-GSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeeccc-chhhhhhhhHHHHHHHHhC
Confidence 568888999999999887665555544 32346778889999998884 4556788999999999763
No 187
>PLN02934 triacylglycerol lipase
Probab=97.07 E-value=0.00072 Score=52.49 Aligned_cols=37 Identities=27% Similarity=0.284 Sum_probs=30.8
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHh
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
...+...+..++++.+..++++.|||+||.+|..+|.
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 3446666777888888889999999999999999874
No 188
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=97.06 E-value=0.0063 Score=45.24 Aligned_cols=161 Identities=14% Similarity=0.136 Sum_probs=90.0
Q ss_pred HHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccCCCCCCHHHHHHHHHHHhhhcCCCcccCcchhh
Q 025629 51 MMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLA 130 (250)
Q Consensus 51 ~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
...++++.++.+++-|-|--|+.++.-|...| +|.++|-...-.- .....+....+.....++ ..-.....
T Consensus 225 q~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDp-rv~aIvp~v~D~L-----ni~a~L~hiyrsYGgnwp---i~l~pyya 295 (507)
T COG4287 225 QDELEQVEIKGFMVTGASKRGWTTWLTAIADP-RVFAIVPFVYDNL-----NIEAQLLHIYRSYGGNWP---IKLAPYYA 295 (507)
T ss_pred HhhhhheeeeeEEEeccccchHHHHHHHhcCc-chhhhhhhHHhhc-----ccHHHHHHHHHhhCCCCC---cccchhHh
Confidence 34556677889999999999999999999888 5776664332110 011111112121111111 10011111
Q ss_pred hhhhcccchhhhhhcccccccCchhhHHHHHHHHhhHHH-HHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcE
Q 025629 131 EAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGI-ERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKK 209 (250)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 209 (250)
..... ....+.+....+........ .....++..|-.++.+..|.+.++..+...++.++ ..+.
T Consensus 296 egi~e--------------rl~tp~fkqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LP-G~ka 360 (507)
T COG4287 296 EGIDE--------------RLETPLFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLP-GEKA 360 (507)
T ss_pred hhHHH--------------hhcCHHHHHHHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCC-Ccee
Confidence 11111 11122223333332221111 12345678999999999999999999999999994 3456
Q ss_pred EEEeCCCCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 210 CILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 210 ~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
+..+|+..|.... .. +.+.+..|+++
T Consensus 361 LrmvPN~~H~~~n---~~----i~esl~~flnr 386 (507)
T COG4287 361 LRMVPNDPHNLIN---QF----IKESLEPFLNR 386 (507)
T ss_pred eeeCCCCcchhhH---HH----HHHHHHHHHHH
Confidence 8889999998753 22 44455555543
No 189
>PLN02408 phospholipase A1
Probab=97.01 E-value=0.00089 Score=50.18 Aligned_cols=36 Identities=17% Similarity=0.119 Sum_probs=27.2
Q ss_pred chHhHHHHhhccCCCC--cEEEEEeccchHHHHHHHhh
Q 025629 45 ALTGWLMMSSSIIPTS--KVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 45 d~~~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~ 80 (250)
++...+..+++..+.. ++++.|||+||.+|..+|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3445566667666543 58999999999999998864
No 190
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=96.97 E-value=0.021 Score=41.23 Aligned_cols=68 Identities=16% Similarity=0.225 Sum_probs=49.4
Q ss_pred CCCEEEEeeCCCcccChHHH---HHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhcCC
Q 025629 177 SLPLLILHGENDTVTDPSVS---KALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSR 245 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~---~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 245 (250)
++-.+-+-|++|.+.-..+. ..+...++....+.+.-+++||+..+ ....+++.+...|.+|+.+.-.
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVF-nGsrfr~eIvPri~dFI~~~d~ 409 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVF-NGSRFREEIVPRIRDFIRRYDR 409 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCcccee-ccchHHHHHHHHHHHHHHHhCc
Confidence 46678889999998765444 44444443223566777899999887 5567788899999999987644
No 191
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.87 E-value=0.0021 Score=47.62 Aligned_cols=54 Identities=24% Similarity=0.369 Sum_probs=41.7
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhh--------CCCceeeEEEeccccc
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLK--------QPNAWSGAILVAPMCK 96 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~--------~p~~v~~lvl~~~~~~ 96 (250)
.+++...+..+.+..+.++++|++||||.++++....+ .+.+++-+|+-+|-..
T Consensus 174 r~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 174 RPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred HHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 56666667777777788999999999999999987643 2346778888887654
No 192
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.87 E-value=0.0018 Score=44.49 Aligned_cols=39 Identities=13% Similarity=0.130 Sum_probs=32.3
Q ss_pred hhchHhHHHHhhccCC-CCcEEEEEeccchHHHHHHHhhC
Q 025629 43 FPALTGWLMMSSSIIP-TSKVFLFGQSLGGAVALKVHLKQ 81 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~ 81 (250)
..|........+++.+ .++++|+|||.|+.+..++..++
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 6677777777888875 56999999999999999998764
No 193
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=96.87 E-value=0.0013 Score=48.29 Aligned_cols=40 Identities=20% Similarity=0.335 Sum_probs=34.8
Q ss_pred CCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEecccccc
Q 025629 57 IPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 97 (250)
Q Consensus 57 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 97 (250)
++.+.+++.|+|.||.-+..+|..||+ |+++|+-+++-+.
T Consensus 308 f~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDl 347 (517)
T KOG1553|consen 308 FRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDL 347 (517)
T ss_pred CCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhh
Confidence 346789999999999999999999997 9999998876543
No 194
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.81 E-value=0.011 Score=40.46 Aligned_cols=46 Identities=17% Similarity=0.216 Sum_probs=36.8
Q ss_pred hhccCCCCcEEEEEeccchHHHHHHHhhCC--CceeeEEEeccccccC
Q 025629 53 SSSIIPTSKVFLFGQSLGGAVALKVHLKQP--NAWSGAILVAPMCKIA 98 (250)
Q Consensus 53 ~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~~~ 98 (250)
++.......+.+|.||+||...+.+..++| ++|.++.+.+++...+
T Consensus 183 ~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~p 230 (297)
T KOG3967|consen 183 IVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGSP 230 (297)
T ss_pred HhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccCc
Confidence 444455678999999999999999999988 4788888888775443
No 195
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.80 E-value=0.11 Score=39.81 Aligned_cols=54 Identities=20% Similarity=0.181 Sum_probs=39.9
Q ss_pred hhchHhHHHHhhccCC----CCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 43 FPALTGWLMMSSSIIP----TSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
.-|....+..+...++ .-|++++|+|.||++|...|.-.|..+++++=-++...
T Consensus 163 AiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred HHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 3444444555555442 24899999999999999999999999988887666543
No 196
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.79 E-value=0.002 Score=49.39 Aligned_cols=52 Identities=15% Similarity=0.087 Sum_probs=37.8
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCC--------ceeeEEEeccc
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPN--------AWSGAILVAPM 94 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~--------~v~~lvl~~~~ 94 (250)
+..+...++...+..+.+|++|++|||||.+.+.+...+++ .|+++|-++++
T Consensus 165 l~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 165 LSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCch
Confidence 33444444555555677999999999999999999988776 36666666654
No 197
>PLN02324 triacylglycerol lipase
Probab=96.77 E-value=0.0017 Score=49.42 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=27.5
Q ss_pred hchHhHHHHhhccCCC--CcEEEEEeccchHHHHHHHhh
Q 025629 44 PALTGWLMMSSSIIPT--SKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
+.+...+..+++..+. .++++.|||+||.+|+..|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3445556667776664 368999999999999998853
No 198
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=96.72 E-value=0.004 Score=48.92 Aligned_cols=55 Identities=27% Similarity=0.401 Sum_probs=40.0
Q ss_pred hhchHhHHHHhhccC---CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEecccccc
Q 025629 43 FPALTGWLMMSSSII---PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 97 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 97 (250)
+.|++..+..+..+. ...|++++|-|+||++|..+-.+||+.|.+.+..+++...
T Consensus 93 LaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 93 LADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp HHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred HHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 666666666666443 3468999999999999999999999999999998887654
No 199
>PLN02310 triacylglycerol lipase
Probab=96.70 E-value=0.0039 Score=47.51 Aligned_cols=35 Identities=23% Similarity=0.229 Sum_probs=24.8
Q ss_pred hHhHHHHhhccCC----CCcEEEEEeccchHHHHHHHhh
Q 025629 46 LTGWLMMSSSIIP----TSKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 46 ~~~~~~~~~~~~~----~~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
+...+..+++.++ ..++.+.|||+||.+|+..|..
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 3444455555442 3479999999999999988853
No 200
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.67 E-value=0.0065 Score=43.85 Aligned_cols=50 Identities=20% Similarity=0.282 Sum_probs=40.3
Q ss_pred hHhHHHHhhccCCCC--cEEEEEeccchHHHHHHHhhCCCceeeEEEecccc
Q 025629 46 LTGWLMMSSSIIPTS--KVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 95 (250)
Q Consensus 46 ~~~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 95 (250)
+.+.+..+..+.+++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 128 lr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 128 LRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 344445555555554 89999999999999999999999999998888765
No 201
>PLN02802 triacylglycerol lipase
Probab=96.66 E-value=0.0023 Score=49.87 Aligned_cols=36 Identities=25% Similarity=0.221 Sum_probs=27.0
Q ss_pred chHhHHHHhhccCCC--CcEEEEEeccchHHHHHHHhh
Q 025629 45 ALTGWLMMSSSIIPT--SKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 45 d~~~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
++...+..+++.++. .++++.|||+||.+|...|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 445556666666654 368999999999999988764
No 202
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.53 E-value=0.0069 Score=45.34 Aligned_cols=40 Identities=23% Similarity=0.237 Sum_probs=31.4
Q ss_pred CCCCcEEEEEeccchHHHHHHHhhCCC-----ceeeEEEeccccc
Q 025629 57 IPTSKVFLFGQSLGGAVALKVHLKQPN-----AWSGAILVAPMCK 96 (250)
Q Consensus 57 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~ 96 (250)
.+.+|+.|+|||+|+.+...+...-.+ .|+.+++++.+..
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 367799999999999999877654332 4899999987654
No 203
>PLN02847 triacylglycerol lipase
Probab=96.50 E-value=0.0044 Score=49.25 Aligned_cols=33 Identities=27% Similarity=0.363 Sum_probs=26.2
Q ss_pred hHHHHhhccCCCCcEEEEEeccchHHHHHHHhh
Q 025629 48 GWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 48 ~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
..+...++..+.-+++++|||+||.+|..++..
T Consensus 239 ~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 239 PCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 344556666777799999999999999988764
No 204
>PLN02719 triacylglycerol lipase
Probab=96.48 E-value=0.0033 Score=49.01 Aligned_cols=37 Identities=19% Similarity=0.148 Sum_probs=26.8
Q ss_pred hchHhHHHHhhccCCC-----CcEEEEEeccchHHHHHHHhh
Q 025629 44 PALTGWLMMSSSIIPT-----SKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~~-----~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
+++...+..+++.++. .++.+.|||+||.+|...|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 3444555666665542 479999999999999998753
No 205
>PLN02753 triacylglycerol lipase
Probab=96.47 E-value=0.0034 Score=49.15 Aligned_cols=36 Identities=19% Similarity=0.149 Sum_probs=27.1
Q ss_pred hchHhHHHHhhccCC-----CCcEEEEEeccchHHHHHHHh
Q 025629 44 PALTGWLMMSSSIIP-----TSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~-----~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
+++...+..+++.++ ..++++.|||+||.+|...|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 344555666666653 358999999999999999885
No 206
>PLN02761 lipase class 3 family protein
Probab=96.46 E-value=0.0033 Score=49.16 Aligned_cols=36 Identities=17% Similarity=0.135 Sum_probs=26.4
Q ss_pred hchHhHHHHhhccCC------CCcEEEEEeccchHHHHHHHh
Q 025629 44 PALTGWLMMSSSIIP------TSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~------~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
+++...+..+++.++ ..++++.|||+||.+|...|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 344555666666552 247999999999999998875
No 207
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.40 E-value=0.013 Score=41.36 Aligned_cols=35 Identities=26% Similarity=0.255 Sum_probs=27.7
Q ss_pred CcEEEEEeccchHHHHHHHhhCCCceeeEEEeccc
Q 025629 60 SKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 94 (250)
Q Consensus 60 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 94 (250)
-|++-+|||+|+.+-+.+...++..-++-|+++-.
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFN 124 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFN 124 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcccceEEEecC
Confidence 37888999999999999888776555677777643
No 208
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=96.36 E-value=0.034 Score=44.41 Aligned_cols=40 Identities=20% Similarity=0.158 Sum_probs=34.8
Q ss_pred CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEecccccc
Q 025629 58 PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 97 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 97 (250)
...+|..+|.|++|...+.+|+..|..+++++...+....
T Consensus 122 sNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 122 SNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred cCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 3578999999999999999999988889999988877653
No 209
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.35 E-value=0.004 Score=48.68 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=25.3
Q ss_pred hHhHHHHhhccCC----CCcEEEEEeccchHHHHHHHhh
Q 025629 46 LTGWLMMSSSIIP----TSKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 46 ~~~~~~~~~~~~~----~~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
+...+..+++.++ ..++.+.|||+||.+|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 4445556665543 3469999999999999988853
No 210
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=96.34 E-value=0.0046 Score=46.54 Aligned_cols=37 Identities=30% Similarity=0.417 Sum_probs=31.8
Q ss_pred hchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhh
Q 025629 44 PALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
..+.+.+..+++..+.-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4666777888888888899999999999999988764
No 211
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.25 E-value=0.005 Score=46.50 Aligned_cols=52 Identities=27% Similarity=0.365 Sum_probs=41.5
Q ss_pred hhchHhHHHHhhccCC--CCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccc
Q 025629 43 FPALTGWLMMSSSIIP--TSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 94 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 94 (250)
+.|++..+..+.+.+. ..+|+.+|-|+||++|..+=.+||+.|.|...-+.+
T Consensus 148 LADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 148 LADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred HHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 5677777777666653 468999999999999999999999988877665544
No 212
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.22 E-value=0.048 Score=38.94 Aligned_cols=35 Identities=20% Similarity=0.053 Sum_probs=29.1
Q ss_pred CcEEEEEeccchHHHHHHHhhCC-CceeeEEEeccc
Q 025629 60 SKVFLFGQSLGGAVALKVHLKQP-NAWSGAILVAPM 94 (250)
Q Consensus 60 ~~~~lvGhS~Gg~~a~~~a~~~p-~~v~~lvl~~~~ 94 (250)
+-++++|.|.||.++-.++..-+ ..|+.+|.++++
T Consensus 92 qGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 92 QGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred CceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 46899999999999999987654 358899988765
No 213
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=96.13 E-value=0.013 Score=42.10 Aligned_cols=50 Identities=26% Similarity=0.394 Sum_probs=36.4
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccc
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 94 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 94 (250)
..+..+-+..+.+..+..++.|.|||+||.+|..+..++. +-.+..-+|.
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T COG5153 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 3444455566777788899999999999999999988875 3344444443
No 214
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=96.13 E-value=0.013 Score=42.10 Aligned_cols=50 Identities=26% Similarity=0.394 Sum_probs=36.4
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccc
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 94 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 94 (250)
..+..+-+..+.+..+..++.|.|||+||.+|..+..++. +-.+..-+|.
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T KOG4540|consen 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 3444455566777788899999999999999999988875 3344444443
No 215
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.05 E-value=0.0099 Score=46.43 Aligned_cols=61 Identities=13% Similarity=0.227 Sum_probs=46.5
Q ss_pred CCCEEEEeeCCCcccChHHHHHHHHHhCC------------------------CCcEEEEeCCCCcccccCCchHHHHHH
Q 025629 177 SLPLLILHGENDTVTDPSVSKALYEKASS------------------------KDKKCILYKDAFHSLLEGEPDDMIIRV 232 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH~~~~~~~~~~~~~~ 232 (250)
.++||+..|..|.++|.-..+.+.+.+.- .+.+++.+.++||+++.++|+. .
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~----a 405 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEA----A 405 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHH----H
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHH----H
Confidence 48999999999999998888888777531 2345788899999999999998 8
Q ss_pred HHHHHHHHh
Q 025629 233 FADIISWLD 241 (250)
Q Consensus 233 ~~~i~~fl~ 241 (250)
.+.+.+|++
T Consensus 406 ~~m~~~fl~ 414 (415)
T PF00450_consen 406 LQMFRRFLK 414 (415)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 899999985
No 216
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.99 E-value=0.035 Score=36.25 Aligned_cols=36 Identities=19% Similarity=0.036 Sum_probs=28.0
Q ss_pred CCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 59 TSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 59 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
.+.+.||.+|||-.+|-++....+ .++.+.+++..-
T Consensus 56 y~hirlvAwSMGVwvAeR~lqg~~--lksatAiNGTgL 91 (214)
T COG2830 56 YRHIRLVAWSMGVWVAERVLQGIR--LKSATAINGTGL 91 (214)
T ss_pred hhhhhhhhhhHHHHHHHHHHhhcc--ccceeeecCCCC
Confidence 356889999999999999987765 667777765543
No 217
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.92 E-value=0.042 Score=41.30 Aligned_cols=62 Identities=16% Similarity=0.241 Sum_probs=48.2
Q ss_pred CCCEEEEeeCCCcccChHHHHHHHHHhCC----------------------CC-cEEEEeCCCCcccccCCchHHHHHHH
Q 025629 177 SLPLLILHGENDTVTDPSVSKALYEKASS----------------------KD-KKCILYKDAFHSLLEGEPDDMIIRVF 233 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~----------------------~~-~~~~~~~~~gH~~~~~~~~~~~~~~~ 233 (250)
.++||+..|+.|.+|+.-..+.+.+.+.- .+ .++..+.++||+++ .+|+. ..
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~----al 307 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNE----TF 307 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHH----HH
Confidence 47999999999999998777777666530 12 56667779999997 58988 88
Q ss_pred HHHHHHHhhc
Q 025629 234 ADIISWLDDH 243 (250)
Q Consensus 234 ~~i~~fl~~~ 243 (250)
+.+.+|+...
T Consensus 308 ~m~~~fi~~~ 317 (319)
T PLN02213 308 IMFQRWISGQ 317 (319)
T ss_pred HHHHHHHcCC
Confidence 8999998653
No 218
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=95.44 E-value=0.095 Score=41.08 Aligned_cols=63 Identities=16% Similarity=0.193 Sum_probs=49.1
Q ss_pred CCCEEEEeeCCCcccChHHHHHHHHHhC-----------C------------CCcEEEEeCCCCcccccCCchHHHHHHH
Q 025629 177 SLPLLILHGENDTVTDPSVSKALYEKAS-----------S------------KDKKCILYKDAFHSLLEGEPDDMIIRVF 233 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-----------~------------~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 233 (250)
..++++..|+.|.++|.-..+.+.+.+. . .+..+..+.|+||.++.++|+. ..
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~----al 438 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPES----AL 438 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHH----HH
Confidence 3799999999999999776666544431 0 1134577889999999999998 77
Q ss_pred HHHHHHHhhc
Q 025629 234 ADIISWLDDH 243 (250)
Q Consensus 234 ~~i~~fl~~~ 243 (250)
..+..|+..+
T Consensus 439 ~m~~~fl~g~ 448 (454)
T KOG1282|consen 439 IMFQRFLNGQ 448 (454)
T ss_pred HHHHHHHcCC
Confidence 8999999875
No 219
>PLN02209 serine carboxypeptidase
Probab=95.37 E-value=0.081 Score=41.53 Aligned_cols=61 Identities=15% Similarity=0.189 Sum_probs=48.5
Q ss_pred CCCEEEEeeCCCcccChHHHHHHHHHhC----------------------CCC-cEEEEeCCCCcccccCCchHHHHHHH
Q 025629 177 SLPLLILHGENDTVTDPSVSKALYEKAS----------------------SKD-KKCILYKDAFHSLLEGEPDDMIIRVF 233 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~----------------------~~~-~~~~~~~~~gH~~~~~~~~~~~~~~~ 233 (250)
.++||+..|+.|.+|+.-..+.+.+.+. ..+ .+++.+.++||+.+ .+|++ ..
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~----al 425 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEE----SS 425 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHH----HH
Confidence 4799999999999999877777766652 022 56777889999996 59998 88
Q ss_pred HHHHHHHhh
Q 025629 234 ADIISWLDD 242 (250)
Q Consensus 234 ~~i~~fl~~ 242 (250)
+.+.+|+..
T Consensus 426 ~m~~~fi~~ 434 (437)
T PLN02209 426 IMFQRWISG 434 (437)
T ss_pred HHHHHHHcC
Confidence 899999865
No 220
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.36 E-value=0.091 Score=41.24 Aligned_cols=62 Identities=16% Similarity=0.232 Sum_probs=48.6
Q ss_pred CCCEEEEeeCCCcccChHHHHHHHHHhCC----------------------C-CcEEEEeCCCCcccccCCchHHHHHHH
Q 025629 177 SLPLLILHGENDTVTDPSVSKALYEKASS----------------------K-DKKCILYKDAFHSLLEGEPDDMIIRVF 233 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~----------------------~-~~~~~~~~~~gH~~~~~~~~~~~~~~~ 233 (250)
..+||+..|+.|.+||.-..+.+.+.+.- . +.+++.+.++||+.+ .+|+. ..
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~----al 421 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNE----TF 421 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHH----HH
Confidence 47999999999999998777777666520 1 256677889999996 58988 88
Q ss_pred HHHHHHHhhc
Q 025629 234 ADIISWLDDH 243 (250)
Q Consensus 234 ~~i~~fl~~~ 243 (250)
+.+..|+...
T Consensus 422 ~m~~~Fi~~~ 431 (433)
T PLN03016 422 IMFQRWISGQ 431 (433)
T ss_pred HHHHHHHcCC
Confidence 8999999753
No 221
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.14 E-value=0.032 Score=36.93 Aligned_cols=44 Identities=14% Similarity=0.212 Sum_probs=36.0
Q ss_pred hhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 53 SSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 53 ~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
++++.-..+.++-|.||||+.|..+.-++|+...++|.+++...
T Consensus 94 v~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 94 VIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred HHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 44433234568889999999999999999999999999998764
No 222
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.53 E-value=0.14 Score=40.83 Aligned_cols=66 Identities=17% Similarity=0.316 Sum_probs=49.4
Q ss_pred CCCEEEEeeCCCcccChHHHHHHHHHhC----C------CCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhcC
Q 025629 177 SLPLLILHGENDTVTDPSVSKALYEKAS----S------KDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 244 (250)
.-++++.||..|.++|+.....+++++. . .-.++..+||.+|+.--.-+..+ .....+.+|+++-.
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~--d~l~aL~~WVE~G~ 428 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPF--DALTALVDWVENGK 428 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCC--CHHHHHHHHHhCCC
Confidence 3579999999999999988877776652 1 13688999999998765433322 38899999998643
No 223
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=93.26 E-value=0.059 Score=43.25 Aligned_cols=47 Identities=21% Similarity=0.233 Sum_probs=34.3
Q ss_pred HHHhhccCC--CCcEEEEEeccchHHHHHHHhh--CCCceeeEEEeccccc
Q 025629 50 LMMSSSIIP--TSKVFLFGQSLGGAVALKVHLK--QPNAWSGAILVAPMCK 96 (250)
Q Consensus 50 ~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~ 96 (250)
+.+-++.++ ..+|.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 164 v~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 164 VQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 344445554 4689999999999999888765 2346888898886543
No 224
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=91.99 E-value=0.013 Score=33.78 Aligned_cols=20 Identities=20% Similarity=0.315 Sum_probs=11.4
Q ss_pred hhhhhhhccccccccccchh
Q 025629 7 AHFSLKELQGSWHHLDTEFS 26 (250)
Q Consensus 7 ~~~G~g~~~g~~hg~~~~~~ 26 (250)
-.+|+++|+++|..+...+.
T Consensus 21 i~HG~~eh~~ry~~~a~~L~ 40 (79)
T PF12146_consen 21 IVHGFGEHSGRYAHLAEFLA 40 (79)
T ss_pred EeCCcHHHHHHHHHHHHHHH
Confidence 34566666666655544444
No 225
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=91.93 E-value=0.69 Score=36.99 Aligned_cols=54 Identities=19% Similarity=0.215 Sum_probs=43.5
Q ss_pred hhchHhHHHHhhccC---CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 43 FPALTGWLMMSSSII---PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
+.+.....+.+++.+ +.+.-+..|.|-||.-++..|.+||+..+++|.-+|...
T Consensus 95 ~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 95 LHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHH
Confidence 444555555666654 446688999999999999999999999999999999764
No 226
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=91.92 E-value=0.82 Score=37.19 Aligned_cols=48 Identities=27% Similarity=0.338 Sum_probs=34.5
Q ss_pred HHHHhhccCCC--CcEEEEEeccchHHHHHHHhh--CCCceeeEEEeccccc
Q 025629 49 WLMMSSSIIPT--SKVFLFGQSLGGAVALKVHLK--QPNAWSGAILVAPMCK 96 (250)
Q Consensus 49 ~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~ 96 (250)
++.+-+..++. ++|.|+|||.||..+...+.. ....++++|+.++...
T Consensus 195 WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 195 WVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred HHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 44556667764 579999999999988876654 2357999999998543
No 227
>PF03283 PAE: Pectinacetylesterase
Probab=90.77 E-value=2.1 Score=32.96 Aligned_cols=39 Identities=23% Similarity=0.184 Sum_probs=26.7
Q ss_pred CCcEEEEEeccchHHHHHHH----hhCCCceeeEEEecccccc
Q 025629 59 TSKVFLFGQSLGGAVALKVH----LKQPNAWSGAILVAPMCKI 97 (250)
Q Consensus 59 ~~~~~lvGhS~Gg~~a~~~a----~~~p~~v~~lvl~~~~~~~ 97 (250)
.++++|.|.|.||.-++..+ ...|..++-..+.++...+
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~ 197 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFL 197 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccc
Confidence 46899999999999888754 3466545555555554443
No 228
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.51 E-value=1.1 Score=35.53 Aligned_cols=41 Identities=24% Similarity=0.254 Sum_probs=31.8
Q ss_pred CCCCcEEEEEeccchHHHHHHHhh-----CCCceeeEEEecccccc
Q 025629 57 IPTSKVFLFGQSLGGAVALKVHLK-----QPNAWSGAILVAPMCKI 97 (250)
Q Consensus 57 ~~~~~~~lvGhS~Gg~~a~~~a~~-----~p~~v~~lvl~~~~~~~ 97 (250)
.+.+|+.|||+|+|+-+....... .-..|..+++++++...
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 467899999999999998866542 22458889999887654
No 229
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=89.20 E-value=0.75 Score=32.66 Aligned_cols=37 Identities=27% Similarity=0.303 Sum_probs=25.9
Q ss_pred CCCcEEEEEeccchHHHHHHHhhC-----CC-ceeeEEEeccc
Q 025629 58 PTSKVFLFGQSLGGAVALKVHLKQ-----PN-AWSGAILVAPM 94 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~~~-----p~-~v~~lvl~~~~ 94 (250)
..++++++|+|.|+.++...+.+. +. ..-.+|+++-+
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNP 88 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCC
Confidence 567899999999999999877653 11 13346666544
No 230
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=88.94 E-value=0.93 Score=34.84 Aligned_cols=39 Identities=21% Similarity=0.255 Sum_probs=27.2
Q ss_pred hchHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCC
Q 025629 44 PALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 82 (250)
.|+...+....++.+..++.|+|+|+|+-+.-..-.+.|
T Consensus 310 ~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 310 ADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCC
Confidence 344444444455567889999999999988776655555
No 231
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=87.79 E-value=3.4 Score=25.11 Aligned_cols=43 Identities=14% Similarity=0.113 Sum_probs=33.1
Q ss_pred hHHHHhhccCCCCcEEEEEeccchH--HHHHHHhhCCCceeeEEE
Q 025629 48 GWLMMSSSIIPTSKVFLFGQSLGGA--VALKVHLKQPNAWSGAIL 90 (250)
Q Consensus 48 ~~~~~~~~~~~~~~~~lvGhS~Gg~--~a~~~a~~~p~~v~~lvl 90 (250)
..+..+++.++..++++||-|--.= +-..+|.++|++|.++.+
T Consensus 53 ~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 53 DNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 3456688889999999999987654 334567889999988764
No 232
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=87.66 E-value=1.7 Score=33.71 Aligned_cols=69 Identities=19% Similarity=0.253 Sum_probs=45.6
Q ss_pred HHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCC-chHHHHHHHHHHHHHHh
Q 025629 169 IERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGE-PDDMIIRVFADIISWLD 241 (250)
Q Consensus 169 ~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~i~~fl~ 241 (250)
+..-+++-...+|+|+|++|++.-... .+-+ ++.++.+.+.|+++|..-+.. |+.-..+....|.+|..
T Consensus 343 I~~Wvr~~~~rmlFVYG~nDPW~A~~f--~l~~--g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 343 IDRWVRNNGPRMLFVYGENDPWSAEPF--RLGK--GKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred HHHHHHhCCCeEEEEeCCCCCcccCcc--ccCC--CCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 334444445679999999998753211 1111 236788889999999876543 45555667888888865
No 233
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=87.22 E-value=2.1 Score=33.63 Aligned_cols=55 Identities=13% Similarity=0.102 Sum_probs=37.7
Q ss_pred hhchHhHHHHhhccC---CCCcEEEEEeccchHHHHHHHhh----C------CCceeeEEEecccccc
Q 025629 43 FPALTGWLMMSSSII---PTSKVFLFGQSLGGAVALKVHLK----Q------PNAWSGAILVAPMCKI 97 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~----~------p~~v~~lvl~~~~~~~ 97 (250)
..++...+..+.... ...+++|.|-|+||..+..+|.. . +-.++|+++.++....
T Consensus 116 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 116 AEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 444455555555544 45699999999999988777643 2 3458999999987653
No 234
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=86.46 E-value=0.88 Score=35.94 Aligned_cols=48 Identities=23% Similarity=0.325 Sum_probs=35.1
Q ss_pred HHHHhhccCCC--CcEEEEEeccchHHHHHHHhh--CCCceeeEEEeccccc
Q 025629 49 WLMMSSSIIPT--SKVFLFGQSLGGAVALKVHLK--QPNAWSGAILVAPMCK 96 (250)
Q Consensus 49 ~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~ 96 (250)
++.+-|++++. ++|.|+|+|.|++.++.+.+. ....+.++|+.++...
T Consensus 167 WV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 167 WVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 44556677764 579999999999988877653 2235778888887764
No 235
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.63 E-value=0.85 Score=36.87 Aligned_cols=36 Identities=28% Similarity=0.510 Sum_probs=25.9
Q ss_pred CCcEEEEEeccchHHHHHHHhh-----CCC------ceeeEEEeccc
Q 025629 59 TSKVFLFGQSLGGAVALKVHLK-----QPN------AWSGAILVAPM 94 (250)
Q Consensus 59 ~~~~~lvGhS~Gg~~a~~~a~~-----~p~------~v~~lvl~~~~ 94 (250)
..+++.+||||||.++-.+... .|+ ..+|+|.++.+
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 5789999999999888766543 332 45677777655
No 236
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=83.43 E-value=2.4 Score=33.65 Aligned_cols=55 Identities=18% Similarity=0.239 Sum_probs=42.4
Q ss_pred hhchHhHHHHhhccCC---CCcEEEEEeccchHHHHHHHhhCCCceeeEEEecccccc
Q 025629 43 FPALTGWLMMSSSIIP---TSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 97 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 97 (250)
+.|++..+.++-...+ ..|++.+|-|+-|.++..+=.++|+.+.|.|..+++...
T Consensus 152 LaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 152 LADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred HHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 4555555555544443 238999999999999999999999999999988877653
No 237
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=83.18 E-value=2.3 Score=37.98 Aligned_cols=53 Identities=17% Similarity=0.187 Sum_probs=37.4
Q ss_pred hhchHhHHHHhhcc-CCCCcEEEEEeccchHHHHHHHhhC--CCceeeEEEecccc
Q 025629 43 FPALTGWLMMSSSI-IPTSKVFLFGQSLGGAVALKVHLKQ--PNAWSGAILVAPMC 95 (250)
Q Consensus 43 ~~d~~~~~~~~~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 95 (250)
+++.+.+...-+++ .+..|+.++|+|+|+.++..+|... .+....+|++++..
T Consensus 2164 ies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2164 IESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred HHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 55555554444444 4678999999999999999998653 23355688888754
No 238
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=82.94 E-value=0.87 Score=34.35 Aligned_cols=29 Identities=21% Similarity=0.023 Sum_probs=23.1
Q ss_pred HHhhccCCCCcEEEEEeccchHHHHHHHh
Q 025629 51 MMSSSIIPTSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 51 ~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
.++++..+.+|-.++|||+|=+.|+.++.
T Consensus 75 ~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 75 ARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhcccccccceeeccchhhHHHHHHCC
Confidence 34556778899999999999888876654
No 239
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=82.23 E-value=0.73 Score=35.36 Aligned_cols=33 Identities=27% Similarity=0.223 Sum_probs=22.3
Q ss_pred hHhHHHHhhccCCCCcEEEEEeccchHHHHHHH
Q 025629 46 LTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVH 78 (250)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a 78 (250)
+++++.+.+....++++-.+|||+||.++..+.
T Consensus 136 la~~~~e~~~~~si~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 136 LAEEVKETLYDYSIEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred cHHHHhhhhhccccceeeeeeeecCCeeeeEEE
Confidence 334444444444468999999999999876543
No 240
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=81.45 E-value=1.7 Score=32.43 Aligned_cols=27 Identities=22% Similarity=0.021 Sum_probs=22.0
Q ss_pred hhccCCCCcEEEEEeccchHHHHHHHh
Q 025629 53 SSSIIPTSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 53 ~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
++...+.++-.++|||+|-+.|+.++.
T Consensus 75 ~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 75 LWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 445678889999999999988877664
No 241
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=80.57 E-value=1.9 Score=32.14 Aligned_cols=28 Identities=18% Similarity=0.011 Sum_probs=22.1
Q ss_pred HhhccCCCCcEEEEEeccchHHHHHHHh
Q 025629 52 MSSSIIPTSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 52 ~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
.++.+.+.++..++|||+|=+.|+.++.
T Consensus 68 ~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 68 RALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 3445567789999999999988887764
No 242
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=80.44 E-value=29 Score=28.02 Aligned_cols=45 Identities=20% Similarity=0.186 Sum_probs=31.6
Q ss_pred HHHhhccCC--CCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 50 LMMSSSIIP--TSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 50 ~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
+..-++.++ ...++|-|-|||..-|+.|+++.. ..++|+--|...
T Consensus 345 I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~N 391 (511)
T TIGR03712 345 IQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVN 391 (511)
T ss_pred HHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccc
Confidence 344445554 457999999999999999998753 346666556544
No 243
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=79.12 E-value=2.8 Score=31.50 Aligned_cols=29 Identities=10% Similarity=0.005 Sum_probs=23.0
Q ss_pred hccCCCCcEEEEEeccchHHHHHHHhhCC
Q 025629 54 SSIIPTSKVFLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 54 ~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 82 (250)
+++.+...-.++|-|+|+.++..||..++
T Consensus 37 Lee~gi~~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 37 LEEAGIPVDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred HHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 34446666789999999999999998743
No 244
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=78.71 E-value=4.5 Score=30.65 Aligned_cols=51 Identities=18% Similarity=0.273 Sum_probs=34.7
Q ss_pred HhHHHHhhcc---CCCCcEEEEEeccchHHHHHHHhh----C------CCceeeEEEecccccc
Q 025629 47 TGWLMMSSSI---IPTSKVFLFGQSLGGAVALKVHLK----Q------PNAWSGAILVAPMCKI 97 (250)
Q Consensus 47 ~~~~~~~~~~---~~~~~~~lvGhS~Gg~~a~~~a~~----~------p~~v~~lvl~~~~~~~ 97 (250)
...+..+.+. +...+++|.|-|+||..+..+|.. . +=.++|+++-+|....
T Consensus 35 ~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 35 HEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYM 98 (319)
T ss_pred HHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCc
Confidence 3344444433 346799999999999988777753 1 1257899988887643
No 245
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=78.64 E-value=2.5 Score=33.51 Aligned_cols=52 Identities=19% Similarity=0.303 Sum_probs=35.5
Q ss_pred chHhHHHHhhccCC---CCcEEEEEeccchHHHHHHHhh----C------CCceeeEEEeccccc
Q 025629 45 ALTGWLMMSSSIIP---TSKVFLFGQSLGGAVALKVHLK----Q------PNAWSGAILVAPMCK 96 (250)
Q Consensus 45 d~~~~~~~~~~~~~---~~~~~lvGhS~Gg~~a~~~a~~----~------p~~v~~lvl~~~~~~ 96 (250)
++...+..+.+..+ ..+++|.|.|+||..+..+|.. . +-.++|+++-+|...
T Consensus 147 ~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 147 RTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTY 211 (433)
T ss_pred HHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcC
Confidence 44455555554443 4789999999999877776643 1 125789999888654
No 246
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=77.66 E-value=2.4 Score=31.40 Aligned_cols=28 Identities=25% Similarity=0.080 Sum_probs=21.5
Q ss_pred hhccCC-CCcEEEEEeccchHHHHHHHhh
Q 025629 53 SSSIIP-TSKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 53 ~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
...+.+ ..+-.++|||+|=+.|+.++..
T Consensus 75 ~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 75 KLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 334455 8899999999999888877643
No 247
>PRK10279 hypothetical protein; Provisional
Probab=77.63 E-value=2.9 Score=31.29 Aligned_cols=29 Identities=14% Similarity=0.072 Sum_probs=23.2
Q ss_pred hccCCCCcEEEEEeccchHHHHHHHhhCC
Q 025629 54 SSIIPTSKVFLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 54 ~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 82 (250)
+++.+...-.++|-|+|+.++..||....
T Consensus 27 L~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 27 LKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 33456777789999999999999997654
No 248
>PLN02209 serine carboxypeptidase
Probab=76.81 E-value=3.7 Score=32.63 Aligned_cols=53 Identities=17% Similarity=0.311 Sum_probs=35.6
Q ss_pred hchHhHHHHhhccCC---CCcEEEEEeccchHHHHHHHhh----C------CCceeeEEEeccccc
Q 025629 44 PALTGWLMMSSSIIP---TSKVFLFGQSLGGAVALKVHLK----Q------PNAWSGAILVAPMCK 96 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~---~~~~~lvGhS~Gg~~a~~~a~~----~------p~~v~~lvl~~~~~~ 96 (250)
.++...+..+.+..+ ..+++|.|.|+||..+..+|.. . +-.++|+++.++...
T Consensus 148 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 148 KKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 344445555554443 4689999999999877776643 1 125789999888654
No 249
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=76.78 E-value=3.6 Score=27.79 Aligned_cols=26 Identities=19% Similarity=0.073 Sum_probs=21.5
Q ss_pred CCCCcEEEEEeccchHHHHHHHhhCC
Q 025629 57 IPTSKVFLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 57 ~~~~~~~lvGhS~Gg~~a~~~a~~~p 82 (250)
.+...-.++|-|.|+.++..++...+
T Consensus 23 ~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 23 RGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred cCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 35567789999999999999998654
No 250
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=75.14 E-value=4.2 Score=28.05 Aligned_cols=25 Identities=24% Similarity=0.107 Sum_probs=20.3
Q ss_pred CCCCcEEEEEeccchHHHHHHHhhC
Q 025629 57 IPTSKVFLFGQSLGGAVALKVHLKQ 81 (250)
Q Consensus 57 ~~~~~~~lvGhS~Gg~~a~~~a~~~ 81 (250)
.+...=+++|-|.|+.++..++...
T Consensus 24 ~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 24 AGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred cCCCcceEEEECHHHHHHHHHHcCC
Confidence 3455568999999999999999754
No 251
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=74.47 E-value=4.1 Score=30.61 Aligned_cols=30 Identities=17% Similarity=0.003 Sum_probs=24.3
Q ss_pred hhccCCCCcEEEEEeccchHHHHHHHhhCC
Q 025629 53 SSSIIPTSKVFLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 53 ~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 82 (250)
.+++.+..+-++.|-|+|+.++..+|....
T Consensus 32 aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 32 ALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 344556788899999999999999998543
No 252
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=73.07 E-value=5.1 Score=29.47 Aligned_cols=27 Identities=15% Similarity=-0.049 Sum_probs=22.0
Q ss_pred ccCCCCcEEEEEeccchHHHHHHHhhC
Q 025629 55 SIIPTSKVFLFGQSLGGAVALKVHLKQ 81 (250)
Q Consensus 55 ~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 81 (250)
++.++..=.++|-|+|+.++..||...
T Consensus 33 eE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 33 EEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 445666667999999999999999864
No 253
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=72.77 E-value=5.8 Score=28.20 Aligned_cols=25 Identities=16% Similarity=-0.012 Sum_probs=20.4
Q ss_pred CCCcEEEEEeccchHHHHHHHhhCC
Q 025629 58 PTSKVFLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~~~p 82 (250)
+...-.++|-|.|+.++..+|...+
T Consensus 26 gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 26 GLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred CCCceEEEEeCHHHHHHHHHHcCCC
Confidence 4555679999999999999997543
No 254
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=72.54 E-value=20 Score=26.40 Aligned_cols=63 Identities=14% Similarity=0.182 Sum_probs=49.1
Q ss_pred CCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhcC
Q 025629 177 SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 244 (250)
+.|+.++-+.- --....+++.+++ |+.+++.+-+..++++=+++.+...+..-.+.+||.++-
T Consensus 5 ~~~IgvFDSGV---GGLsVlrei~~~L--P~e~~iY~~D~a~~PYG~ks~e~I~~~~~~i~~~l~~~~ 67 (269)
T COG0796 5 QPPIGVFDSGV---GGLSVLREIRRQL--PDEDIIYVGDTARFPYGEKSEEEIRERTLEIVDFLLERG 67 (269)
T ss_pred CCeEEEEECCC---CcHHHHHHHHHHC--CCCcEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 35677664332 2346778889999 899999999999999999999888778888888887653
No 255
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=69.94 E-value=7.3 Score=28.69 Aligned_cols=37 Identities=27% Similarity=0.371 Sum_probs=27.8
Q ss_pred CcEEEEEeccchHHHHHHHhh---CCCceeeEEEeccccc
Q 025629 60 SKVFLFGQSLGGAVALKVHLK---QPNAWSGAILVAPMCK 96 (250)
Q Consensus 60 ~~~~lvGhS~Gg~~a~~~a~~---~p~~v~~lvl~~~~~~ 96 (250)
.+++|.|-|+|++-+...-.. .-+++++.+..+|+..
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 479999999998877654322 2356999999998764
No 256
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=69.72 E-value=5.8 Score=32.59 Aligned_cols=38 Identities=21% Similarity=0.291 Sum_probs=30.2
Q ss_pred cEEEEEeccchHHHHHHHhhCC-CceeeEEEeccccccC
Q 025629 61 KVFLFGQSLGGAVALKVHLKQP-NAWSGAILVAPMCKIA 98 (250)
Q Consensus 61 ~~~lvGhS~Gg~~a~~~a~~~p-~~v~~lvl~~~~~~~~ 98 (250)
-||..+.|-||.-++..|.+.. ..|++++...|.....
T Consensus 286 ~VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~~ 324 (690)
T PF10605_consen 286 LVIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNLP 324 (690)
T ss_pred EEEEEeecCccHHHHhHhhcccCCceeeEEecCCccCCC
Confidence 3556699999999999998754 4799999988876554
No 257
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=69.19 E-value=7.7 Score=29.32 Aligned_cols=20 Identities=30% Similarity=0.511 Sum_probs=17.0
Q ss_pred EEEEeccchHHHHHHHhhCC
Q 025629 63 FLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 63 ~lvGhS~Gg~~a~~~a~~~p 82 (250)
.++|.|+||.+|..++..++
T Consensus 35 ~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 35 WIAGTSTGGILALALLHGKS 54 (312)
T ss_pred EEEeeChHHHHHHHHHcCCC
Confidence 58899999999999997543
No 258
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=68.09 E-value=5.4 Score=32.60 Aligned_cols=27 Identities=19% Similarity=0.022 Sum_probs=23.1
Q ss_pred ccCCCCcEEEEEeccchHHHHHHHhhC
Q 025629 55 SIIPTSKVFLFGQSLGGAVALKVHLKQ 81 (250)
Q Consensus 55 ~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 81 (250)
+..+++|-.++|||+|=+.|+..|.-.
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 568899999999999999988887654
No 259
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=68.01 E-value=7.5 Score=27.48 Aligned_cols=26 Identities=15% Similarity=0.167 Sum_probs=21.4
Q ss_pred CCCCcEEEEEeccchHHHHHHHhhCC
Q 025629 57 IPTSKVFLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 57 ~~~~~~~lvGhS~Gg~~a~~~a~~~p 82 (250)
.+...-.++|.|.|+.++..++...+
T Consensus 23 ~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 23 AGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred cCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 34455679999999999999998765
No 260
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=66.16 E-value=57 Score=25.26 Aligned_cols=65 Identities=17% Similarity=0.165 Sum_probs=47.5
Q ss_pred CCCCEEEEeeCCCcccChHHHHHHHHHhCC--CCcEEEEeCCCCccccc-CCchHHHHHHHHHHHHHHhhcC
Q 025629 176 VSLPLLILHGENDTVTDPSVSKALYEKASS--KDKKCILYKDAFHSLLE-GEPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 176 i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~i~~fl~~~~ 244 (250)
...+.+.+.+..|.++|.+..+++.+.... -+++.+-+.++-|..+. ..|.. +.+...+|+....
T Consensus 224 ~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~----y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 224 LPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKT----YLKKCSEFLRSVI 291 (350)
T ss_pred ccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHH----HHHHHHHHHHhcc
Confidence 357888999999999999888887554422 34556666778887655 35665 8888899988654
No 261
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=65.52 E-value=11 Score=25.66 Aligned_cols=25 Identities=16% Similarity=0.102 Sum_probs=20.4
Q ss_pred CCCcEEEEEeccchHHHHHHHhhCC
Q 025629 58 PTSKVFLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~~~p 82 (250)
+...=.++|-|.|+.++..++...+
T Consensus 26 g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 26 GIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred CCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 4455679999999999999987654
No 262
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=65.48 E-value=14 Score=29.71 Aligned_cols=38 Identities=24% Similarity=0.239 Sum_probs=27.8
Q ss_pred CcEEEEEeccchHHHHHHHhhCCC---ceeeEEEecccccc
Q 025629 60 SKVFLFGQSLGGAVALKVHLKQPN---AWSGAILVAPMCKI 97 (250)
Q Consensus 60 ~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~ 97 (250)
.+.+|+|-|+||.-+..+|..--+ ..+++|++.+....
T Consensus 198 ~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvlig 238 (498)
T COG2939 198 SPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIG 238 (498)
T ss_pred CceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeec
Confidence 589999999999999888865333 35666766665443
No 263
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=63.35 E-value=8.7 Score=28.97 Aligned_cols=22 Identities=32% Similarity=0.289 Sum_probs=18.9
Q ss_pred CCCcEEEEEeccchHHHHHHHh
Q 025629 58 PTSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
+.++.++.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 5778899999999998888765
No 264
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=62.38 E-value=13 Score=29.96 Aligned_cols=30 Identities=17% Similarity=0.336 Sum_probs=22.0
Q ss_pred cEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 208 KKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 208 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
..+.+++ +||+++.++|+. ....+..|+.-
T Consensus 461 ~~~r~y~-aGHMvp~d~P~~----~~~~~~~~~~~ 490 (498)
T COG2939 461 TFLRIYE-AGHMVPYDRPES----SLEMVNLWING 490 (498)
T ss_pred eEEEEec-CcceeecCChHH----HHHHHHHHHhh
Confidence 3444555 899999999998 66667777654
No 265
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=62.16 E-value=13 Score=25.13 Aligned_cols=24 Identities=17% Similarity=0.027 Sum_probs=19.2
Q ss_pred CCCcEEEEEeccchHHHHHHHhhC
Q 025629 58 PTSKVFLFGQSLGGAVALKVHLKQ 81 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~~~ 81 (250)
+...=.++|-|.|+.++..++...
T Consensus 26 ~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 26 GIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred CCCeeEEEEECHHHHHHHHHHcCC
Confidence 344557999999999999998654
No 266
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=62.13 E-value=11 Score=31.03 Aligned_cols=45 Identities=22% Similarity=0.225 Sum_probs=29.5
Q ss_pred HHHhhccCC--CCcEEEEEeccchHHHHHHHhhC--CCceeeEEEeccc
Q 025629 50 LMMSSSIIP--TSKVFLFGQSLGGAVALKVHLKQ--PNAWSGAILVAPM 94 (250)
Q Consensus 50 ~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~ 94 (250)
+..-+..++ .++|.|+|||.||..+..+...- ...+.++|..++.
T Consensus 183 v~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 183 VKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred HHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 344555554 46899999999999987766431 1345566666554
No 267
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=61.11 E-value=15 Score=26.90 Aligned_cols=23 Identities=22% Similarity=0.085 Sum_probs=19.3
Q ss_pred cEEEEEeccchHHHHHHHhhCCC
Q 025629 61 KVFLFGQSLGGAVALKVHLKQPN 83 (250)
Q Consensus 61 ~~~lvGhS~Gg~~a~~~a~~~p~ 83 (250)
.=.++|.|.|+.++..++...+.
T Consensus 28 fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 28 FDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred CCEEEEECHHHHhHHHHHhCCcc
Confidence 33799999999999999987654
No 268
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=60.65 E-value=24 Score=29.21 Aligned_cols=53 Identities=17% Similarity=0.246 Sum_probs=35.8
Q ss_pred hhhhhhchHhHHHHhhccCCCCcEEEEEe------ccchHHHHHHHhhCCCceeeEEEeccc
Q 025629 39 FMATFPALTGWLMMSSSIIPTSKVFLFGQ------SLGGAVALKVHLKQPNAWSGAILVAPM 94 (250)
Q Consensus 39 ~~~~~~d~~~~~~~~~~~~~~~~~~lvGh------S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 94 (250)
-|+....+...+.+++.. .++|+++|| +.|+.+++..-+..-.+ .+.+.++|.
T Consensus 319 TRvRaRvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 319 TRVRARVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 333355555566666655 679999999 78999998765544433 567777764
No 269
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=60.31 E-value=5.7 Score=29.13 Aligned_cols=16 Identities=25% Similarity=0.613 Sum_probs=12.9
Q ss_pred CCCcEEEEEeccchHH
Q 025629 58 PTSKVFLFGQSLGGAV 73 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~ 73 (250)
....++++|||+|..=
T Consensus 233 ~i~~I~i~GhSl~~~D 248 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVD 248 (270)
T ss_pred CCCEEEEEeCCCchhh
Confidence 4578999999999753
No 270
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=59.59 E-value=7.4 Score=30.81 Aligned_cols=37 Identities=19% Similarity=0.085 Sum_probs=26.1
Q ss_pred hHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCce
Q 025629 48 GWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAW 85 (250)
Q Consensus 48 ~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 85 (250)
+.+.++.++ +..+=++.|-|.|+.+|..++...++.+
T Consensus 90 GVLkaL~E~-gl~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 90 GVLKALFEA-NLLPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 333444443 4455689999999999999998766543
No 271
>PRK04148 hypothetical protein; Provisional
Probab=57.79 E-value=49 Score=21.47 Aligned_cols=36 Identities=14% Similarity=0.087 Sum_probs=24.5
Q ss_pred chHhHHHHhhccCCCCcEEEEEeccchHHHHHHHhh
Q 025629 45 ALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 45 d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
++++++..........++..+|--.|..+|..++..
T Consensus 3 ~i~~~l~~~~~~~~~~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 3 TIAEFIAENYEKGKNKKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred HHHHHHHHhcccccCCEEEEEEecCCHHHHHHHHHC
Confidence 444555444444444679999999888888888753
No 272
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=54.22 E-value=38 Score=19.22 Aligned_cols=35 Identities=14% Similarity=0.297 Sum_probs=17.0
Q ss_pred cEEEEEeccchHHHHHHHhhCCCceeeEEEeccccccC
Q 025629 61 KVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 98 (250)
Q Consensus 61 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 98 (250)
+++++| ||.+++.+|......=..+.++.......
T Consensus 1 ~vvViG---gG~ig~E~A~~l~~~g~~vtli~~~~~~~ 35 (80)
T PF00070_consen 1 RVVVIG---GGFIGIELAEALAELGKEVTLIERSDRLL 35 (80)
T ss_dssp EEEEES---SSHHHHHHHHHHHHTTSEEEEEESSSSSS
T ss_pred CEEEEC---cCHHHHHHHHHHHHhCcEEEEEeccchhh
Confidence 466777 45555555443222224555555444333
No 273
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=53.83 E-value=19 Score=25.85 Aligned_cols=34 Identities=21% Similarity=0.051 Sum_probs=23.6
Q ss_pred hHHHHhhccCCCC--cEEEEEeccchHHHHHHHhhCC
Q 025629 48 GWLMMSSSIIPTS--KVFLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 48 ~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~~p 82 (250)
+.+..+.++ +.. .-.++|-|.|+.++..++...+
T Consensus 16 GVl~~L~e~-gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 16 GVLSLLIEA-GVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHc-CCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 333444443 333 3479999999999999998754
No 274
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=53.77 E-value=24 Score=25.63 Aligned_cols=20 Identities=25% Similarity=0.220 Sum_probs=17.5
Q ss_pred EEEEeccchHHHHHHHhhCC
Q 025629 63 FLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 63 ~lvGhS~Gg~~a~~~a~~~p 82 (250)
.+.|-|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 39999999999999998654
No 275
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=53.69 E-value=12 Score=29.34 Aligned_cols=33 Identities=12% Similarity=0.067 Sum_probs=24.7
Q ss_pred ccCCCCcEEEEEeccchHHHHHHHhhCCCceee
Q 025629 55 SIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSG 87 (250)
Q Consensus 55 ~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 87 (250)
.+.+..+=++.|-|.|+.+|..+|...++.+..
T Consensus 106 ~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~ 138 (391)
T cd07229 106 WLRGLLPRIITGTATGALIAALVGVHTDEELLR 138 (391)
T ss_pred HHcCCCCceEEEecHHHHHHHHHHcCCHHHHHH
Confidence 334566778999999999999999865544433
No 276
>PRK00865 glutamate racemase; Provisional
Probab=53.11 E-value=58 Score=23.95 Aligned_cols=60 Identities=13% Similarity=0.172 Sum_probs=44.6
Q ss_pred CCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 178 LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 178 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
.|+.++-..-- -....+.+.+.+ |+..++.+-+..|++.-+++.+....+...+.+||.+
T Consensus 6 ~~IgvfDSGiG---GLtvl~~i~~~l--p~~~~iY~~D~~~~PYG~ks~~~i~~~~~~~~~~L~~ 65 (261)
T PRK00865 6 APIGVFDSGVG---GLTVLREIRRLL--PDEHIIYVGDTARFPYGEKSEEEIRERTLEIVEFLLE 65 (261)
T ss_pred CeEEEEECCcc---HHHHHHHHHHHC--CCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 35555533322 245667788888 8889999999999999999888777777777788865
No 277
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=53.03 E-value=43 Score=19.25 Aligned_cols=26 Identities=23% Similarity=0.244 Sum_probs=19.1
Q ss_pred CCCCcEEEEEeccchHHHHHHHhhCC
Q 025629 57 IPTSKVFLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 57 ~~~~~~~lvGhS~Gg~~a~~~a~~~p 82 (250)
.+.+++.++|-|-|=.+|.+.+..+.
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred CCCceEEEEecCCcccHHHHHHHHhc
Confidence 34578999999999988887776653
No 278
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=52.86 E-value=11 Score=29.81 Aligned_cols=40 Identities=15% Similarity=0.039 Sum_probs=28.6
Q ss_pred hHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeE
Q 025629 48 GWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGA 88 (250)
Q Consensus 48 ~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 88 (250)
+.+..+.++ +..+=+++|-|.|+.+|..++...++.+..+
T Consensus 84 GVlkaL~e~-gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 84 GVVKALLDA-DLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHHhC-CCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 444555554 4566689999999999999998666555443
No 279
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=52.78 E-value=6.8 Score=29.53 Aligned_cols=33 Identities=15% Similarity=0.144 Sum_probs=23.6
Q ss_pred hHHHHhhccCCCCcEEEEEeccchHHHHHHHhhC
Q 025629 48 GWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQ 81 (250)
Q Consensus 48 ~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 81 (250)
+.+..+.++ +..+-++.|-|.|+.+|..++...
T Consensus 85 GVlkaL~e~-gl~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 85 GVVRTLVEH-QLLPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 333444443 556668999999999999998753
No 280
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=52.08 E-value=28 Score=25.86 Aligned_cols=28 Identities=29% Similarity=0.349 Sum_probs=22.3
Q ss_pred hhccC-CCCcEEEEEeccchHHHHHHHhh
Q 025629 53 SSSII-PTSKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 53 ~~~~~-~~~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
+.+.+ +..++.++|.|-|++.|-.+|..
T Consensus 84 l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 84 LSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 43444 56789999999999999999865
No 281
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=51.90 E-value=27 Score=23.64 Aligned_cols=23 Identities=22% Similarity=0.094 Sum_probs=17.9
Q ss_pred CCCcEEEEEeccchHHHHHHHhh
Q 025629 58 PTSKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
....-.+.|-|.||.+++.++..
T Consensus 25 ~~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 25 GERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp CCT-SEEEEECCHHHHHHHHHTC
T ss_pred CCCccEEEEcChhhhhHHHHHhC
Confidence 34445799999999999888776
No 282
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=49.22 E-value=15 Score=28.19 Aligned_cols=18 Identities=33% Similarity=0.445 Sum_probs=15.8
Q ss_pred EEEEeccchHHHHHHHhh
Q 025629 63 FLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 63 ~lvGhS~Gg~~a~~~a~~ 80 (250)
.+.|.|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 578999999999999864
No 283
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=47.90 E-value=28 Score=25.27 Aligned_cols=20 Identities=30% Similarity=0.197 Sum_probs=18.0
Q ss_pred EEEEeccchHHHHHHHhhCC
Q 025629 63 FLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 63 ~lvGhS~Gg~~a~~~a~~~p 82 (250)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999998754
No 284
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=47.63 E-value=14 Score=27.00 Aligned_cols=42 Identities=19% Similarity=-0.005 Sum_probs=28.4
Q ss_pred hHHHHhhccCCCCcEE-EEEeccchHHHHHHHhhCCCceeeEEE
Q 025629 48 GWLMMSSSIIPTSKVF-LFGQSLGGAVALKVHLKQPNAWSGAIL 90 (250)
Q Consensus 48 ~~~~~~~~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lvl 90 (250)
+.+..++.... .++. ++|.|+|+.-...|.++.+.+-++++.
T Consensus 28 GVLD~fl~a~~-~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 28 GVLDEFLRANF-NPFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred HHHHHHHHhcc-CCcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 34444553322 2444 779999999999999998876555543
No 285
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=47.03 E-value=21 Score=26.79 Aligned_cols=35 Identities=17% Similarity=0.064 Sum_probs=24.5
Q ss_pred hHHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCC
Q 025629 48 GWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPN 83 (250)
Q Consensus 48 ~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 83 (250)
+.+..+.++ +..+=++.|.|.|+.+|..++....+
T Consensus 86 Gvl~aL~e~-~l~~~~i~GtSaGAi~aa~~~~~~~~ 120 (298)
T cd07206 86 GVVKALWEQ-DLLPRVISGSSAGAIVAALLGTHTDE 120 (298)
T ss_pred HHHHHHHHc-CCCCCEEEEEcHHHHHHHHHHcCCcH
Confidence 334444443 44556799999999999999876443
No 286
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=46.96 E-value=34 Score=25.00 Aligned_cols=21 Identities=24% Similarity=0.371 Sum_probs=18.2
Q ss_pred EEEEEeccchHHHHHHHhhCC
Q 025629 62 VFLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 62 ~~lvGhS~Gg~~a~~~a~~~p 82 (250)
-.++|-|.|+.++..++...+
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 469999999999999997655
No 287
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=46.89 E-value=86 Score=22.96 Aligned_cols=46 Identities=15% Similarity=0.264 Sum_probs=35.9
Q ss_pred HHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHh
Q 025629 194 SVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 241 (250)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 241 (250)
...+.+.+.+ |+.+++.+-+..|+++=+++.+........+.+||.
T Consensus 12 tv~~~l~~~~--p~~~~iy~~D~~~~PYG~ks~~~i~~~~~~~~~~L~ 57 (251)
T TIGR00067 12 SVLKEIRKQL--PKEHYIYVGDTKRFPYGEKSPEFILEYVLELLTFLK 57 (251)
T ss_pred HHHHHHHHHC--CCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 3456777777 788889998999999988888766666667777776
No 288
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=46.89 E-value=16 Score=27.53 Aligned_cols=17 Identities=29% Similarity=0.548 Sum_probs=15.3
Q ss_pred EEEEeccchHHHHHHHh
Q 025629 63 FLFGQSLGGAVALKVHL 79 (250)
Q Consensus 63 ~lvGhS~Gg~~a~~~a~ 79 (250)
.++|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48899999999999986
No 289
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=45.89 E-value=19 Score=26.91 Aligned_cols=19 Identities=32% Similarity=0.452 Sum_probs=16.7
Q ss_pred EEEEeccchHHHHHHHhhC
Q 025629 63 FLFGQSLGGAVALKVHLKQ 81 (250)
Q Consensus 63 ~lvGhS~Gg~~a~~~a~~~ 81 (250)
.++|-|.||.+|..++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 5889999999999998754
No 290
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=45.10 E-value=32 Score=24.12 Aligned_cols=37 Identities=19% Similarity=0.062 Sum_probs=25.6
Q ss_pred hchHhHHHHhhccCCCCcEEEEEecc----chHHHHHHHhhC
Q 025629 44 PALTGWLMMSSSIIPTSKVFLFGQSL----GGAVALKVHLKQ 81 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~~~~~~lvGhS~----Gg~~a~~~a~~~ 81 (250)
+.+...+.+++++.+ ..++|+|+|. |..++..+|.+.
T Consensus 94 e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 94 LATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred HHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHh
Confidence 344555666666655 5788888888 778888887764
No 291
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=44.63 E-value=44 Score=26.67 Aligned_cols=40 Identities=18% Similarity=0.127 Sum_probs=24.6
Q ss_pred CCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCccccc
Q 025629 178 LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE 222 (250)
Q Consensus 178 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 222 (250)
..|++..|+.|++..... .+.. +.....+++++++|..-+
T Consensus 377 tnviFtNG~~DPW~~lgv----~~~~-~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGV----TSDS-SDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-S-SSSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCcccccC----CCCC-CCCcccEEECCCeeeccc
Confidence 479999999999865442 1222 255677889999997654
No 292
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=41.90 E-value=85 Score=22.24 Aligned_cols=53 Identities=13% Similarity=0.147 Sum_probs=32.0
Q ss_pred hhhchHhHHHHhhccCCCCcEEEEEeccchHHHHHH--------HhhCCCceeeEEEeccc
Q 025629 42 TFPALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKV--------HLKQPNAWSGAILVAPM 94 (250)
Q Consensus 42 ~~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~--------a~~~p~~v~~lvl~~~~ 94 (250)
..++..+.+...++..+.-..+++-||+||....-+ ...+|+.....+.+-|.
T Consensus 106 ~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~~~~~~~~ilP~ 166 (216)
T PF00091_consen 106 ALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPKKPIISFSILPF 166 (216)
T ss_dssp HHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTTSEEEEEEEE-C
T ss_pred cccccccccchhhccccccccceecccccceeccccccccchhhhccccccceeecccccc
Confidence 345555666666666667788999999998743322 23467654444444454
No 293
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=40.45 E-value=1.2e+02 Score=23.30 Aligned_cols=30 Identities=20% Similarity=0.151 Sum_probs=23.9
Q ss_pred HHhhccC-CCCcEEEEEeccchHHHHHHHhh
Q 025629 51 MMSSSII-PTSKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 51 ~~~~~~~-~~~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
.-+++.+ +.++++++|.|-|+++|--+|..
T Consensus 112 rFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 112 RFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 3455555 56899999999999999888765
No 294
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=38.58 E-value=45 Score=24.36 Aligned_cols=21 Identities=19% Similarity=0.151 Sum_probs=18.1
Q ss_pred EEEEEeccchHHHHHHHhhCC
Q 025629 62 VFLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 62 ~~lvGhS~Gg~~a~~~a~~~p 82 (250)
-.+.|-|.|+.++..++...+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 468899999999999988654
No 295
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=38.15 E-value=23 Score=27.17 Aligned_cols=18 Identities=33% Similarity=0.146 Sum_probs=14.7
Q ss_pred EEEEEeccchHHHHHHHh
Q 025629 62 VFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 62 ~~lvGhS~Gg~~a~~~a~ 79 (250)
-.++|||+|=+.|+.++.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 367999999988887764
No 296
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=37.44 E-value=45 Score=22.11 Aligned_cols=19 Identities=32% Similarity=0.307 Sum_probs=16.5
Q ss_pred CcEEEEEeccchHHHHHHH
Q 025629 60 SKVFLFGQSLGGAVALKVH 78 (250)
Q Consensus 60 ~~~~lvGhS~Gg~~a~~~a 78 (250)
..-++.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 3457889999999999998
No 297
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=37.41 E-value=1.7e+02 Score=21.53 Aligned_cols=36 Identities=22% Similarity=0.394 Sum_probs=16.7
Q ss_pred EEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCC
Q 025629 182 ILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAF 217 (250)
Q Consensus 182 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 217 (250)
+|-|..|.....+..+++.+..+.++.++.++|.++
T Consensus 3 ~iGG~~~~~~~~~i~~~~~~lag~~~~rI~~iptAS 38 (250)
T TIGR02069 3 IIGGAEDKVGDREILREFVSRAGGEDAIIVIITSAS 38 (250)
T ss_pred EEeCccccCChHHHHHHHHHHhCCCCceEEEEeCCC
Confidence 444444443333344444444443444555555443
No 298
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=36.67 E-value=21 Score=28.60 Aligned_cols=51 Identities=16% Similarity=0.054 Sum_probs=30.9
Q ss_pred EEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 182 ILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 182 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
+++|..|..|+.+.++... + ..+....++ +.|..++..++ +.+.|.+||..
T Consensus 371 ~~y~dGDGTV~~~S~~~~~--~--~~~~~~~l~-~~H~~il~n~~-----v~~~I~~fL~~ 421 (440)
T PLN02733 371 YTYVDGDGTVPVESAKADG--L--NAVARVGVP-GDHRGILRDEH-----VFRILKHWLKV 421 (440)
T ss_pred EEEeCCCCEEecchhhccC--c--cccccccCC-chHHHHhcCHH-----HHHHHHHHHhc
Confidence 3345556666655543221 1 223345555 78988886554 78999999964
No 299
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=36.66 E-value=23 Score=26.77 Aligned_cols=17 Identities=29% Similarity=0.475 Sum_probs=14.9
Q ss_pred EEEEeccchHHHHHHHh
Q 025629 63 FLFGQSLGGAVALKVHL 79 (250)
Q Consensus 63 ~lvGhS~Gg~~a~~~a~ 79 (250)
.++|-|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 58899999999998874
No 300
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=36.07 E-value=56 Score=20.59 Aligned_cols=31 Identities=16% Similarity=0.256 Sum_probs=23.4
Q ss_pred chHhHHHHhhccCCCCcEEEEEeccchHHHH
Q 025629 45 ALTGWLMMSSSIIPTSKVFLFGQSLGGAVAL 75 (250)
Q Consensus 45 d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~ 75 (250)
+..+.+.-.+..++.+.++++||+--|.+..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 4555566667778999999999987776654
No 301
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=36.06 E-value=1.1e+02 Score=23.57 Aligned_cols=44 Identities=18% Similarity=0.070 Sum_probs=31.5
Q ss_pred HHhhccCCCCcEEEEEeccc--hHHHHHHHhhCCCceeeEEEeccc
Q 025629 51 MMSSSIIPTSKVFLFGQSLG--GAVALKVHLKQPNAWSGAILVAPM 94 (250)
Q Consensus 51 ~~~~~~~~~~~~~lvGhS~G--g~~a~~~a~~~p~~v~~lvl~~~~ 94 (250)
..++..++..+++|||-|-= =.+=..++.++|++|.++.+=+-.
T Consensus 269 ~nil~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 269 RNILRRYPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred HHHHHhCCCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 44667788899999998832 133345567899999998876644
No 302
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=35.69 E-value=62 Score=25.73 Aligned_cols=62 Identities=11% Similarity=0.234 Sum_probs=32.8
Q ss_pred CCCEEEEeeCCCcccChHHHHHHHHHhCCCC--cEEEEeCCCCcccc---cCCchHHHHHHHHHHHHHHhhc
Q 025629 177 SLPLLILHGENDTVTDPSVSKALYEKASSKD--KKCILYKDAFHSLL---EGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~---~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
+.|++++.|.-|.+-+ +....+.+.+...+ .-.+.+||.|+... -+..+ .+.+.|.+|+...
T Consensus 189 p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~----~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSS----RLHQAVLDYLASR 255 (411)
T ss_dssp -EEEEEEE--TTS-GG-GGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CC----HHHHHHHHHHHHS
T ss_pred CCCEEEEeCCcchhHH-HHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHH----HHHHHHHHHHhcC
Confidence 5799999999997742 33333333331133 34455678887542 22333 3888999999764
No 303
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=35.22 E-value=28 Score=25.45 Aligned_cols=18 Identities=39% Similarity=0.643 Sum_probs=16.1
Q ss_pred EEEEeccchHHHHHHHhh
Q 025629 63 FLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 63 ~lvGhS~Gg~~a~~~a~~ 80 (250)
.++|-|.||.+|..++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 488999999999999876
No 304
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=34.49 E-value=40 Score=27.18 Aligned_cols=57 Identities=12% Similarity=0.127 Sum_probs=39.7
Q ss_pred hhchHhHHHHhhccCC---CCcEEEEEeccchHHHHHHHhh----C-----C-CceeeEEEeccccccCC
Q 025629 43 FPALTGWLMMSSSIIP---TSKVFLFGQSLGGAVALKVHLK----Q-----P-NAWSGAILVAPMCKIAD 99 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~---~~~~~lvGhS~Gg~~a~~~a~~----~-----p-~~v~~lvl~~~~~~~~~ 99 (250)
..|.-..+..+.++++ ..+++|.|-|++|...-.+|.. . | -.++|+++-+|......
T Consensus 148 A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~ 217 (454)
T KOG1282|consen 148 AKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEI 217 (454)
T ss_pred HHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCccc
Confidence 4555555666666554 5789999999999777777643 2 1 25889998888766444
No 305
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=34.49 E-value=1.5e+02 Score=20.02 Aligned_cols=37 Identities=11% Similarity=0.106 Sum_probs=21.7
Q ss_pred CCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccc
Q 025629 58 PTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 94 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 94 (250)
..+++.+.|-|..|..-+.++...++.|..+|=.+|.
T Consensus 67 ~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np~ 103 (160)
T PF08484_consen 67 EGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNPL 103 (160)
T ss_dssp TT--EEEE---SHHHHHHHHHT--TTTS--EEES-GG
T ss_pred cCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCChh
Confidence 3578999999999999999988777778777766653
No 306
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=33.17 E-value=17 Score=29.23 Aligned_cols=38 Identities=16% Similarity=0.075 Sum_probs=27.4
Q ss_pred HHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEE
Q 025629 51 MMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAI 89 (250)
Q Consensus 51 ~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 89 (250)
..+.++ +.-|=++.|-|+||.+|..++.+..+.++.+.
T Consensus 194 rtL~e~-dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 194 RTLLEQ-DLLPNIISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred HHHHHc-cccchhhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 444443 34466899999999999999988766555543
No 307
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=33.15 E-value=29 Score=26.83 Aligned_cols=18 Identities=22% Similarity=0.388 Sum_probs=16.0
Q ss_pred EEEEeccchHHHHHHHhh
Q 025629 63 FLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 63 ~lvGhS~Gg~~a~~~a~~ 80 (250)
.++|-|.||.+|+.++..
T Consensus 46 liaGTStGgiiA~~la~~ 63 (349)
T cd07214 46 VIAGTSTGGLITAMLTAP 63 (349)
T ss_pred EEeeCCHHHHHHHHHhcC
Confidence 478999999999999874
No 308
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=33.02 E-value=78 Score=19.82 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=23.9
Q ss_pred cEEEEE-eccchHHHHHHHhhCCCceeeEEEecc
Q 025629 61 KVFLFG-QSLGGAVALKVHLKQPNAWSGAILVAP 93 (250)
Q Consensus 61 ~~~lvG-hS~Gg~~a~~~a~~~p~~v~~lvl~~~ 93 (250)
++.|+| ..+.|...+.+...+|+ +.-+.+.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~~ 33 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVSS 33 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeeee
Confidence 578899 88999988988888885 554444443
No 309
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=32.61 E-value=36 Score=25.92 Aligned_cols=56 Identities=21% Similarity=0.183 Sum_probs=36.5
Q ss_pred hhchHhHHHHhhcc---CCCCcEEEEEeccchHHHHHHHhhC------C---CceeeEEEeccccccC
Q 025629 43 FPALTGWLMMSSSI---IPTSKVFLFGQSLGGAVALKVHLKQ------P---NAWSGAILVAPMCKIA 98 (250)
Q Consensus 43 ~~d~~~~~~~~~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~------p---~~v~~lvl~~~~~~~~ 98 (250)
..|+...+..+... +...|++|+.-|+||-+|..++... . -...+++|-+++..+.
T Consensus 102 a~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~ 169 (414)
T KOG1283|consen 102 ALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPE 169 (414)
T ss_pred HHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChh
Confidence 34444444444433 3457999999999999999887542 1 2466778777765433
No 310
>PRK15219 carbonic anhydrase; Provisional
Probab=32.22 E-value=33 Score=24.99 Aligned_cols=35 Identities=20% Similarity=0.335 Sum_probs=25.6
Q ss_pred hchHhHHHHhhccCCCCcEEEEEeccchHHHHHHH
Q 025629 44 PALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVH 78 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a 78 (250)
.+..+-+...+..++.+.++|+|||-=|.+...+.
T Consensus 127 ~~~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~~ 161 (245)
T PRK15219 127 DDLLGSMEFACAVAGAKVVLVMGHTACGAVKGAID 161 (245)
T ss_pred cchhhHHHHHHHHcCCCEEEEecCCcchHHHHHHh
Confidence 34455566677788889999999998777666543
No 311
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=31.95 E-value=50 Score=23.21 Aligned_cols=21 Identities=10% Similarity=0.063 Sum_probs=15.5
Q ss_pred HHhhccCCCCcEEEEEeccch
Q 025629 51 MMSSSIIPTSKVFLFGQSLGG 71 (250)
Q Consensus 51 ~~~~~~~~~~~~~lvGhS~Gg 71 (250)
..++...+.+.+.||||+=|=
T Consensus 143 ~~~i~~~~~~tVLIVGHnp~i 163 (201)
T PRK15416 143 KDLQRKSPDKNIVIFTHNHCL 163 (201)
T ss_pred HHHHHhCCCCEEEEEeCchhH
Confidence 455566666789999998763
No 312
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=31.53 E-value=81 Score=26.43 Aligned_cols=39 Identities=26% Similarity=0.425 Sum_probs=26.6
Q ss_pred CCcEEEEEeccchHHHHHHHhh---CC-CceeeEEEecccccc
Q 025629 59 TSKVFLFGQSLGGAVALKVHLK---QP-NAWSGAILVAPMCKI 97 (250)
Q Consensus 59 ~~~~~lvGhS~Gg~~a~~~a~~---~p-~~v~~lvl~~~~~~~ 97 (250)
.++++++|-|.||.+....|.+ +. ...+|+++.-++.-.
T Consensus 468 gEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~ 510 (880)
T KOG4388|consen 468 GERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLL 510 (880)
T ss_pred cceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhhc
Confidence 4799999999999877665543 11 123588887765443
No 313
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=31.39 E-value=64 Score=27.96 Aligned_cols=22 Identities=18% Similarity=0.205 Sum_probs=18.0
Q ss_pred CCCcEEEEEeccchHHHHHHHh
Q 025629 58 PTSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 58 ~~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
+..-=+++|.|+||.++..+|.
T Consensus 64 ~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 64 RVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCCCceEEeeCHHHHHHHHHHc
Confidence 4444578999999999999886
No 314
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=31.15 E-value=56 Score=21.38 Aligned_cols=30 Identities=13% Similarity=0.203 Sum_probs=20.6
Q ss_pred chHhHHHHhhccCCCCcEEEEEeccchHHH
Q 025629 45 ALTGWLMMSSSIIPTSKVFLFGQSLGGAVA 74 (250)
Q Consensus 45 d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a 74 (250)
+..+.+.-.+..++.+.++++||+-=|.+.
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~~ 70 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGMLT 70 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcceE
Confidence 444455556677888999999998555443
No 315
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=30.88 E-value=78 Score=23.05 Aligned_cols=17 Identities=29% Similarity=0.221 Sum_probs=15.7
Q ss_pred EEEEeccchHHHHHHHh
Q 025629 63 FLFGQSLGGAVALKVHL 79 (250)
Q Consensus 63 ~lvGhS~Gg~~a~~~a~ 79 (250)
.++|-|.|+.++..++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 79999999999999984
No 316
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=30.47 E-value=45 Score=33.62 Aligned_cols=27 Identities=19% Similarity=0.027 Sum_probs=22.1
Q ss_pred HhhccCCCCcEEEEEeccchHHHHHHH
Q 025629 52 MSSSIIPTSKVFLFGQSLGGAVALKVH 78 (250)
Q Consensus 52 ~~~~~~~~~~~~lvGhS~Gg~~a~~~a 78 (250)
.++..++..+-.++|||+|=+.|+.++
T Consensus 666 ~lL~~~Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 666 KLFTQAGFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHcCCccceeecCCHHHHHHHHHh
Confidence 345667888999999999998887766
No 317
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=30.38 E-value=35 Score=26.08 Aligned_cols=17 Identities=24% Similarity=0.309 Sum_probs=14.6
Q ss_pred EEEEeccchHHHHHHHh
Q 025629 63 FLFGQSLGGAVALKVHL 79 (250)
Q Consensus 63 ~lvGhS~Gg~~a~~~a~ 79 (250)
.++|.|.||.+|+.++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 57899999999998764
No 318
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=30.03 E-value=1.2e+02 Score=17.78 Aligned_cols=35 Identities=11% Similarity=0.147 Sum_probs=28.6
Q ss_pred chHhHHHHhhccCCCCcEEEEEeccchHHHHHHHh
Q 025629 45 ALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHL 79 (250)
Q Consensus 45 d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 79 (250)
....++..+.+.++.+.|.+.|-+....+|..+..
T Consensus 28 ~~~~~~~~l~~~LG~QdV~V~Gip~~sh~ArvLVe 62 (84)
T PF07643_consen 28 GPAAWVDGLRQALGPQDVTVYGIPADSHFARVLVE 62 (84)
T ss_pred CHHHHHHHHHHHhCCceeEEEccCCccHHHHHHHH
Confidence 34446677888899999999999999999987654
No 319
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=29.96 E-value=63 Score=29.94 Aligned_cols=22 Identities=27% Similarity=0.179 Sum_probs=18.2
Q ss_pred HHHhhccCCCCcEEEEEeccch
Q 025629 50 LMMSSSIIPTSKVFLFGQSLGG 71 (250)
Q Consensus 50 ~~~~~~~~~~~~~~lvGhS~Gg 71 (250)
+.+++..+++.|=.++|||.|-
T Consensus 572 LtDlLs~lgi~PDGIvGHS~GE 593 (2376)
T KOG1202|consen 572 LTDLLSCLGIRPDGIVGHSLGE 593 (2376)
T ss_pred HHHHHHhcCCCCCcccccccch
Confidence 3567777899999999999984
No 320
>PRK14046 malate--CoA ligase subunit beta; Provisional
Probab=28.75 E-value=53 Score=25.92 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=28.7
Q ss_pred CCcEEEEEeccchHHHHHHHhhCCCceeeEEE
Q 025629 59 TSKVFLFGQSLGGAVALKVHLKQPNAWSGAIL 90 (250)
Q Consensus 59 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 90 (250)
..+++++|.+.||.-.=..+.++|+.+..+.+
T Consensus 118 ~g~~v~~~s~~GGv~iEe~~~~~p~~i~~~~i 149 (392)
T PRK14046 118 SERVRVIASARGGMEIEEIAAKEPEAIIQVVV 149 (392)
T ss_pred CCcEEEEEeCCCCCchHHHhhhChhheEEEEc
Confidence 46899999999999999999999999888766
No 321
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=28.37 E-value=2.2e+02 Score=20.25 Aligned_cols=37 Identities=14% Similarity=0.352 Sum_probs=14.8
Q ss_pred EEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCC
Q 025629 180 LLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDA 216 (250)
Q Consensus 180 vl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (250)
++++-|..|+..+.+..+.+.+....++.++.++|-+
T Consensus 2 l~~iGGg~~~~~~~~i~~~~~~~ag~~~~~i~~iptA 38 (217)
T cd03145 2 LVLIGGAEDKYDNRAILQRFVARAGGAGARIVVIPAA 38 (217)
T ss_pred EEEEeCCCCCcCHHHHHHHHHHHcCCCCCcEEEEeCC
Confidence 3444444433333333344444433233444444433
No 322
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=28.35 E-value=91 Score=21.48 Aligned_cols=33 Identities=12% Similarity=0.194 Sum_probs=25.0
Q ss_pred hHhHHHHhhccCCCCcEEEEEeccchHHHHHHH
Q 025629 46 LTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVH 78 (250)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a 78 (250)
..+.+...+..++.+.++++|||-=|.+...+.
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHHc
Confidence 445556667788999999999998887776553
No 323
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=28.33 E-value=1.5e+02 Score=18.19 Aligned_cols=51 Identities=10% Similarity=0.158 Sum_probs=29.6
Q ss_pred hHHHHHHHHHhCCCCcEEEEeC-CCCc-ccccCCchHHHHHHHHHHHHHHhhcC
Q 025629 193 PSVSKALYEKASSKDKKCILYK-DAFH-SLLEGEPDDMIIRVFADIISWLDDHS 244 (250)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~-~~gH-~~~~~~~~~~~~~~~~~i~~fl~~~~ 244 (250)
+..+..+.+.+.+.++++.+-+ +.|+ .+.+. .+.-..++-.++..|+.+-.
T Consensus 10 ~r~AqaF~DYl~sqgI~~~i~~~~~~~~~lwl~-de~~~~~a~~el~~Fl~nP~ 62 (101)
T PF12122_consen 10 PRAAQAFIDYLASQGIELQIEPEGQGQFALWLH-DEEHLEQAEQELEEFLQNPN 62 (101)
T ss_dssp HHHHHHHHHHHHHTT--EEEE-SSSE--EEEES--GGGHHHHHHHHHHHHHS-S
T ss_pred HHHHHHHHHHHHHCCCeEEEEECCCCceEEEEe-CHHHHHHHHHHHHHHHHCCC
Confidence 5677777777765677777774 4553 44443 33334567788888887643
No 324
>PF12083 DUF3560: Domain of unknown function (DUF3560); InterPro: IPR021944 This presumed domain is functionally uncharacterised. This domain is found in bacteria. This domain is about 120 amino acids in length. This domain has a conserved GHHSE sequence motif.
Probab=28.22 E-value=47 Score=21.29 Aligned_cols=25 Identities=20% Similarity=0.143 Sum_probs=17.2
Q ss_pred hchHhHHHHhhccCCCCcEEEEEec
Q 025629 44 PALTGWLMMSSSIIPTSKVFLFGQS 68 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~~~~~~lvGhS 68 (250)
..+......+.+.++....|||||.
T Consensus 26 ~~~~~~a~~~~~~ip~GQPIlVGHH 50 (126)
T PF12083_consen 26 EAAYEAANRMAEAIPFGQPILVGHH 50 (126)
T ss_pred HHHHHHHHHHHhccCCCCCeecccc
Confidence 3344455667777887888999984
No 325
>COG0813 DeoD Purine-nucleoside phosphorylase [Nucleotide transport and metabolism]
Probab=27.79 E-value=1.9e+02 Score=20.84 Aligned_cols=41 Identities=12% Similarity=0.104 Sum_probs=29.9
Q ss_pred CCCCcEEEEEeccchHHHHHHHh----hCCCceeeEEEeccccccCC
Q 025629 57 IPTSKVFLFGQSLGGAVALKVHL----KQPNAWSGAILVAPMCKIAD 99 (250)
Q Consensus 57 ~~~~~~~lvGhS~Gg~~a~~~a~----~~p~~v~~lvl~~~~~~~~~ 99 (250)
+..+++.++||-||-.-...|+. .| .|+.+|-+++......
T Consensus 53 YKGk~iSvmg~GmGipS~sIY~~ELi~~y--~Vk~iIRvGt~Gal~~ 97 (236)
T COG0813 53 YKGKKISVMGHGMGIPSISIYSRELITDY--GVKKIIRVGTCGALSE 97 (236)
T ss_pred ecCcEEEEEEecCCCccHHHHHHHHHHHh--CcceEEEEEccccccC
Confidence 45689999999999766555543 34 4889998887765543
No 326
>PRK07877 hypothetical protein; Provisional
Probab=27.69 E-value=1.1e+02 Score=26.68 Aligned_cols=41 Identities=15% Similarity=0.073 Sum_probs=29.7
Q ss_pred HhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccc
Q 025629 52 MSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 94 (250)
Q Consensus 52 ~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 94 (250)
+-.+.+...+|.|+|-+.|+.++..+|..- -|..+++++.-
T Consensus 100 ~~Q~~L~~~~V~IvG~GlGs~~a~~LaraG--vvG~l~lvD~D 140 (722)
T PRK07877 100 EEQERLGRLRIGVVGLSVGHAIAHTLAAEG--LCGELRLADFD 140 (722)
T ss_pred HHHHHHhcCCEEEEEecHHHHHHHHHHHcc--CCCeEEEEcCC
Confidence 344556678999999999998888887542 12677887764
No 327
>PF11009 DUF2847: Protein of unknown function (DUF2847); InterPro: IPR022551 Members of this protein family, including YtxJ from Bacillus subtilis, occur in species that encode proteins for synthesizing bacillithiol. The protein is described as thioredoxin-like, while another bacillithiol-associated protein, YpdA (TIGR04018 from TIGRFAMS), is described as thioredoxin reductase-like. ; PDB: 3IV4_A.
Probab=27.47 E-value=1.3e+02 Score=18.69 Aligned_cols=34 Identities=12% Similarity=-0.004 Sum_probs=22.6
Q ss_pred HhHHHHhhccCCCCcEEEEEeccchHHHHHHHhh
Q 025629 47 TGWLMMSSSIIPTSKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 47 ~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
.+++..+++.-..++++|+=||.-+.++.++-.+
T Consensus 7 ~eql~~i~~~S~~~~~~iFKHSt~C~IS~~a~~~ 40 (105)
T PF11009_consen 7 EEQLEEILEESKEKPVLIFKHSTRCPISAMALRE 40 (105)
T ss_dssp HHHHHHHHHH---SEEEEEEE-TT-HHHHHHHHH
T ss_pred HHHHHHHHHhcccCcEEEEEeCCCChhhHHHHHH
Confidence 3456667777677899999999999998877544
No 328
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=27.29 E-value=93 Score=24.49 Aligned_cols=22 Identities=27% Similarity=0.742 Sum_probs=17.2
Q ss_pred HhccCCCCCEEEEeeCCCcccC
Q 025629 171 RRLEKVSLPLLILHGENDTVTD 192 (250)
Q Consensus 171 ~~~~~i~~Pvl~i~g~~D~~~~ 192 (250)
..+...++|+++|.|.+|..-.
T Consensus 69 ~~l~~~~Ipv~~I~GNHD~~~~ 90 (390)
T COG0420 69 RRLKDAGIPVVVIAGNHDSPSR 90 (390)
T ss_pred HHhccCCCcEEEecCCCCchhc
Confidence 4455578999999999997654
No 329
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=26.89 E-value=88 Score=24.20 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=23.7
Q ss_pred cEEEEEeccchHHHHHHHhhCCCceeeEEEecccc
Q 025629 61 KVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 95 (250)
Q Consensus 61 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 95 (250)
+++++|-++||..+..-+.+....-..++++++..
T Consensus 1 ~vvIiGgG~aG~~~a~~l~~~~~~~~~I~li~~~~ 35 (364)
T TIGR03169 1 HLVLIGGGHTHALVLRRWAMKPLPGVRVTLINPSS 35 (364)
T ss_pred CEEEECCcHHHHHHHHHhcCcCCCCCEEEEECCCC
Confidence 47899999999887776644322234678887543
No 330
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=25.87 E-value=2.1e+02 Score=19.25 Aligned_cols=39 Identities=28% Similarity=0.155 Sum_probs=21.0
Q ss_pred CEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcc
Q 025629 179 PLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHS 219 (250)
Q Consensus 179 Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 219 (250)
-++++..--|.-.+.+..+++.+.+ .+.++.+|--+|..
T Consensus 41 D~i~lG~w~d~G~~d~~~~~fl~~l--~~KkV~lF~T~G~~ 79 (160)
T PF12641_consen 41 DLIFLGFWIDKGTPDKDMKEFLKKL--KGKKVALFGTAGAG 79 (160)
T ss_pred CEEEEEcCccCCCCCHHHHHHHHHc--cCCeEEEEEecCCC
Confidence 4455555555555555566666666 44555555544444
No 331
>COG3675 Predicted lipase [Lipid metabolism]
Probab=25.83 E-value=44 Score=24.97 Aligned_cols=41 Identities=22% Similarity=0.209 Sum_probs=26.3
Q ss_pred HHHHhhccCCC-CcEEEEEeccchHHHHHHHh----hCCCceeeEEE
Q 025629 49 WLMMSSSIIPT-SKVFLFGQSLGGAVALKVHL----KQPNAWSGAIL 90 (250)
Q Consensus 49 ~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~----~~p~~v~~lvl 90 (250)
....+++..+. -.+.++|||-|+.++...+. +.| ++..+++
T Consensus 163 q~~~lleeiP~~Yrig~tghS~g~aii~vrGtyfe~k~p-~vdnlv~ 208 (332)
T COG3675 163 QEQTLLEEIPQGYRIGITGHSSGGAIICVRGTYFERKYP-RVDNLVV 208 (332)
T ss_pred HHHHHHHhcccceEEEEEeecCCccEEEEeccchhcccC-Cccccee
Confidence 33455666665 45689999999988765443 344 4665554
No 332
>COG2201 CheB Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]
Probab=25.38 E-value=1.3e+02 Score=23.45 Aligned_cols=28 Identities=32% Similarity=0.568 Sum_probs=21.7
Q ss_pred CCcEEEEEeccchHHHHHHHh-hCCCcee
Q 025629 59 TSKVFLFGQSLGGAVALKVHL-KQPNAWS 86 (250)
Q Consensus 59 ~~~~~lvGhS~Gg~~a~~~a~-~~p~~v~ 86 (250)
..+++++|-|.||.-|+.... ..|..+.
T Consensus 156 ~~~iV~IGaStGGp~AL~~il~~lP~~~p 184 (350)
T COG2201 156 ARKIVAIGASTGGPAALRAVLPALPADFP 184 (350)
T ss_pred CccEEEEEeCCCCHHHHHHHHHhCCCCCC
Confidence 357899999999999997654 4676555
No 333
>COG5023 Tubulin [Cytoskeleton]
Probab=25.29 E-value=2.5e+02 Score=22.23 Aligned_cols=54 Identities=19% Similarity=0.180 Sum_probs=31.7
Q ss_pred hhchHhHHHHhhccCCCCcEEEEEeccchHHH--------HHHHhhCCCceeeEEEeccccc
Q 025629 43 FPALTGWLMMSSSIIPTSKVFLFGQSLGGAVA--------LKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 43 ~~d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a--------~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
+++..+.++...+....-.=+++=||+||... -++..++|+++..-..+-|...
T Consensus 113 ~ddvmd~IrreAd~cD~LqGF~l~HS~gGGTGSG~GslLLerl~~eypkK~~~tfSV~P~p~ 174 (443)
T COG5023 113 IDDVMDMIRREADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPKKIKLTFSVFPAPK 174 (443)
T ss_pred HHHHHHHHHHHhhcCccccceeeeeeccCcCcccHHHHHHHHHHHhcchhheeEEEeccCCc
Confidence 44444444444444444445777888876433 3445678988776666666543
No 334
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=25.02 E-value=1.8e+02 Score=19.15 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=23.3
Q ss_pred chHhHHHHhhccCCCCcEEEEEeccchHHHHHHH
Q 025629 45 ALTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVH 78 (250)
Q Consensus 45 d~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a 78 (250)
+..+.+.-.+..++.+.++++|||-=|.+...+.
T Consensus 40 ~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 40 SALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp HHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred chhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 3444555567778999999999998888775443
No 335
>PF15566 Imm18: Immunity protein 18
Probab=24.97 E-value=91 Score=16.35 Aligned_cols=27 Identities=22% Similarity=0.206 Sum_probs=20.1
Q ss_pred hHhHHHHhhccCCCCcEEEEEeccchH
Q 025629 46 LTGWLMMSSSIIPTSKVFLFGQSLGGA 72 (250)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~lvGhS~Gg~ 72 (250)
+...+..+....+.+.++++--||||.
T Consensus 7 L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 7 LQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHhccCCCCceecccccccc
Confidence 445556666666777899999999986
No 336
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=24.39 E-value=1.2e+02 Score=21.25 Aligned_cols=44 Identities=18% Similarity=0.156 Sum_probs=31.0
Q ss_pred HHHHhhccCCCCcEEEEEec-cchHHHHHHHhhCCCceeeEEEecccc
Q 025629 49 WLMMSSSIIPTSKVFLFGQS-LGGAVALKVHLKQPNAWSGAILVAPMC 95 (250)
Q Consensus 49 ~~~~~~~~~~~~~~~lvGhS-~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 95 (250)
+..+..+.+...++.++|-. +|+.++..++.. .+..+.++++-.
T Consensus 11 ~g~~~q~kl~~~~VlviG~GglGs~ia~~La~~---Gv~~i~lvD~d~ 55 (202)
T TIGR02356 11 IGEEGQQRLLNSHVLIIGAGGLGSPAALYLAGA---GVGTIVIVDDDH 55 (202)
T ss_pred cCHHHHHHhcCCCEEEECCCHHHHHHHHHHHHc---CCCeEEEecCCE
Confidence 33445566777899999875 677777776654 377889988754
No 337
>COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism]
Probab=24.18 E-value=2.6e+02 Score=19.56 Aligned_cols=71 Identities=10% Similarity=0.085 Sum_probs=46.4
Q ss_pred HHHhccCCCCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCC--cccccCCchHHHHHHHHHHHHHHhhc
Q 025629 169 IERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAF--HSLLEGEPDDMIIRVFADIISWLDDH 243 (250)
Q Consensus 169 ~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--H~~~~~~~~~~~~~~~~~i~~fl~~~ 243 (250)
+...+.....+.+++.+-+=+.++++....+.+...............| |-.+--.+.. +.+.+.+|+.+.
T Consensus 78 i~~al~~~~~~~~~v~~~D~P~i~~~lv~~l~~~~~~~~~~~~~~~~~g~~~Pl~aly~~~----l~~~l~~~l~~g 150 (192)
T COG0746 78 ILAALRHFGTEWVLVLPCDMPFIPPELVERLLSAFKQTGAAIVPAHDDGRLEPLFALYHRA----LLPALEEYLAKG 150 (192)
T ss_pred HHHHHHhCCCCeEEEEecCCCCCCHHHHHHHHHhhcccCCcEEEeCCCCceeeEEEEehHH----HHHHHHHHHHhC
Confidence 3344555568889999999999999999999888742234455555556 3222112333 778888887653
No 338
>PF14714 KH_dom-like: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; PDB: 2HJG_A 1MKY_A.
Probab=24.04 E-value=1.6e+02 Score=17.06 Aligned_cols=28 Identities=14% Similarity=0.184 Sum_probs=19.3
Q ss_pred CCCCEEEEeeCCCcccChHHHHHHHHHh
Q 025629 176 VSLPLLILHGENDTVTDPSVSKALYEKA 203 (250)
Q Consensus 176 i~~Pvl~i~g~~D~~~~~~~~~~~~~~~ 203 (250)
...|+.++++.+...++....+.+.+.+
T Consensus 37 ~~PPtFv~f~N~~~~~~~sY~ryL~n~l 64 (80)
T PF14714_consen 37 TRPPTFVLFVNDPELLPESYKRYLENQL 64 (80)
T ss_dssp TTTTEEEEEES-CCC--HHHHHHHHHHH
T ss_pred CCCCEEEEEeCCcccCCHHHHHHHHHHH
Confidence 4679999999998888877776665554
No 339
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=23.93 E-value=1.8e+02 Score=20.60 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=30.9
Q ss_pred CCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCC
Q 025629 177 SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDA 216 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (250)
..|++++.|..+...+++..+.+.+.+ .+.=++.++.+
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl--~~GGfl~~D~~ 90 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYL--ENGGFLLFDDR 90 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHH--HcCCEEEEECC
Confidence 579999999999988888888888888 55566677655
No 340
>PF04816 DUF633: Family of unknown function (DUF633) ; InterPro: IPR006901 This is a family of uncharacterised bacterial proteins.; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity; PDB: 3LEC_A 3KU1_G 3KR9_A 3GNL_B.
Probab=23.11 E-value=1.1e+02 Score=21.57 Aligned_cols=41 Identities=17% Similarity=0.241 Sum_probs=22.2
Q ss_pred hHHHHhhccCC-CCcEEEEEeccchHHHHHHHhhCCCce---eeEEE
Q 025629 48 GWLMMSSSIIP-TSKVFLFGQSLGGAVALKVHLKQPNAW---SGAIL 90 (250)
Q Consensus 48 ~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v---~~lvl 90 (250)
+++.+.++.-. .+-+++.| |||.+........|+.. ..+||
T Consensus 55 gdGL~~l~~~e~~d~ivIAG--MGG~lI~~ILe~~~~~~~~~~~lIL 99 (205)
T PF04816_consen 55 GDGLEVLKPGEDVDTIVIAG--MGGELIIEILEAGPEKLSSAKRLIL 99 (205)
T ss_dssp -SGGGG--GGG---EEEEEE--E-HHHHHHHHHHTGGGGTT--EEEE
T ss_pred CCcccccCCCCCCCEEEEec--CCHHHHHHHHHhhHHHhccCCeEEE
Confidence 33333444333 44566667 89999999988877643 45555
No 341
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=23.08 E-value=1.2e+02 Score=21.10 Aligned_cols=32 Identities=9% Similarity=0.235 Sum_probs=24.3
Q ss_pred HhHHHHhhccCCCCcEEEEEeccchHHHHHHH
Q 025629 47 TGWLMMSSSIIPTSKVFLFGQSLGGAVALKVH 78 (250)
Q Consensus 47 ~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a 78 (250)
.+.+.-.+..++.+.++++|||-=|.+...+.
T Consensus 74 ~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 74 SAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred hhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 34555567788899999999998777766553
No 342
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=23.03 E-value=1.2e+02 Score=22.92 Aligned_cols=22 Identities=18% Similarity=0.184 Sum_probs=17.8
Q ss_pred cEEEEEeccchHHHHHHHhhCC
Q 025629 61 KVFLFGQSLGGAVALKVHLKQP 82 (250)
Q Consensus 61 ~~~lvGhS~Gg~~a~~~a~~~p 82 (250)
+|+|||-+.+|..+..++.+..
T Consensus 3 dV~IvGaG~aGl~~A~~L~~~G 24 (356)
T PF01494_consen 3 DVAIVGAGPAGLAAALALARAG 24 (356)
T ss_dssp EEEEE--SHHHHHHHHHHHHTT
T ss_pred eEEEECCCHHHHHHHHHHHhcc
Confidence 6899999999999999888875
No 343
>PHA00026 cp coat protein
Probab=22.86 E-value=83 Score=18.92 Aligned_cols=34 Identities=15% Similarity=0.394 Sum_probs=23.9
Q ss_pred cEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhhcCC
Q 025629 208 KKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSR 245 (250)
Q Consensus 208 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 245 (250)
.+++.++++|-.-.--.|.. +.+-+.+|+..+..
T Consensus 5 ~~fvlvdnggtgdvtvapsn----fangvaewis~nsr 38 (129)
T PHA00026 5 RQFVLVDNGGTGDVTVAPSN----FANGVAEWISNNSR 38 (129)
T ss_pred eEEEEEecCCccceEEeccc----cchhHHHHHhcCcc
Confidence 46777777776655556766 78888899876543
No 344
>PLN00416 carbonate dehydratase
Probab=22.55 E-value=1.3e+02 Score=22.22 Aligned_cols=33 Identities=9% Similarity=0.168 Sum_probs=24.7
Q ss_pred hHhHHHHhhccCCCCcEEEEEeccchHHHHHHH
Q 025629 46 LTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVH 78 (250)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a 78 (250)
..+-+.-.+..++.+.++|+|||-=|.+...+.
T Consensus 126 ~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 126 VGAAVEYAVVHLKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred chhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 334566677788999999999998777766553
No 345
>PRK14852 hypothetical protein; Provisional
Probab=22.50 E-value=2.6e+02 Score=25.54 Aligned_cols=42 Identities=14% Similarity=0.113 Sum_probs=31.1
Q ss_pred HHhhccCCCCcEEEEEec-cchHHHHHHHhhCCCceeeEEEecccc
Q 025629 51 MMSSSIIPTSKVFLFGQS-LGGAVALKVHLKQPNAWSGAILVAPMC 95 (250)
Q Consensus 51 ~~~~~~~~~~~~~lvGhS-~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 95 (250)
.+-.+.+...+|.|+|-+ .|+.++..+|.. -|..+.+++.-.
T Consensus 324 ~e~Q~kL~~srVlVvGlGGlGs~ia~~LAra---GVG~I~L~D~D~ 366 (989)
T PRK14852 324 YAGQRRLLRSRVAIAGLGGVGGIHLMTLART---GIGNFNLADFDA 366 (989)
T ss_pred HHHHHHHhcCcEEEECCcHHHHHHHHHHHHc---CCCeEEEEcCCE
Confidence 344556777899999998 788888877765 377888887643
No 346
>PRK03482 phosphoglycerate mutase; Provisional
Probab=22.18 E-value=1.8e+02 Score=20.45 Aligned_cols=31 Identities=19% Similarity=0.156 Sum_probs=17.7
Q ss_pred hHhHHHHhhccCCCCcEEEEEeccchHHHHHHH
Q 025629 46 LTGWLMMSSSIIPTSKVFLFGQSLGGAVALKVH 78 (250)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a 78 (250)
....+..+.+..+.+++.+|+| |+.+...++
T Consensus 129 v~~~l~~~~~~~~~~~vliVsH--g~~i~~l~~ 159 (215)
T PRK03482 129 MHAALESCLELPQGSRPLLVSH--GIALGCLVS 159 (215)
T ss_pred HHHHHHHHHHhCCCCeEEEEeC--cHHHHHHHH
Confidence 3444444444445567899999 455544433
No 347
>PLN03006 carbonate dehydratase
Probab=22.18 E-value=1.2e+02 Score=23.00 Aligned_cols=31 Identities=16% Similarity=0.292 Sum_probs=23.7
Q ss_pred HhHHHHhhccCCCCcEEEEEeccchHHHHHH
Q 025629 47 TGWLMMSSSIIPTSKVFLFGQSLGGAVALKV 77 (250)
Q Consensus 47 ~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~ 77 (250)
.+-+...+..++.+.++|+|||-=|.+...+
T Consensus 159 ~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 159 KAALEFSVNTLNVENILVIGHSRCGGIQALM 189 (301)
T ss_pred hhhHHHHHHHhCCCEEEEecCCCchHHHHHh
Confidence 4456667778899999999999877766543
No 348
>COG3051 CitF Citrate lyase, alpha subunit [Energy production and conversion]
Probab=21.91 E-value=61 Score=25.15 Aligned_cols=35 Identities=23% Similarity=0.235 Sum_probs=23.1
Q ss_pred ChhhhhhhhhhhhccccccccccchhhHHHhhHHhhhh
Q 025629 1 MVMETLAHFSLKELQGSWHHLDTEFSLWITLDLAFQQV 38 (250)
Q Consensus 1 ~~~~~~~~~G~g~~~g~~hg~~~~~~~~~~~~~~l~~~ 38 (250)
|+|+.++.+|+-...-....+.. +..++++.....
T Consensus 83 ~Vm~~Ia~mGfKnLtlA~SSl~~---~h~pliehIknG 117 (513)
T COG3051 83 MVMDVIAKMGFKNLTLASSSLSD---CHAPLVEHIKNG 117 (513)
T ss_pred HHHHHHHHhCccceeeccchhhh---hhHHHHHHHhcC
Confidence 68999999999876655444333 235666666554
No 349
>PRK10673 acyl-CoA esterase; Provisional
Probab=21.85 E-value=3e+02 Score=19.56 Aligned_cols=62 Identities=19% Similarity=0.227 Sum_probs=33.7
Q ss_pred CCCEEEEeeCCCcccChHHHHHHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHHHHHHHHhh
Q 025629 177 SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 242 (250)
Q Consensus 177 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 242 (250)
+.|+++++|-.+.. ..-..+...+. .+.+++.++--||..-...+....+...+.+..+++.
T Consensus 16 ~~~iv~lhG~~~~~---~~~~~~~~~l~-~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 16 NSPIVLVHGLFGSL---DNLGVLARDLV-NDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDA 77 (255)
T ss_pred CCCEEEECCCCCch---hHHHHHHHHHh-hCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 46899999976543 22233444443 4567777776666432211121223356667777664
No 350
>PLN03058 dynein light chain type 1 family protein; Provisional
Probab=21.82 E-value=41 Score=21.63 Aligned_cols=32 Identities=19% Similarity=0.053 Sum_probs=19.0
Q ss_pred hchHhHHHHhhccCCCCcE-EEEEeccchHHHH
Q 025629 44 PALTGWLMMSSSIIPTSKV-FLFGQSLGGAVAL 75 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~~~~~-~lvGhS~Gg~~a~ 75 (250)
.+++..+....+..-...+ .+||.|+|..++-
T Consensus 69 kdIA~~IKk~fDkkYG~tWHCIVGk~FGs~VTH 101 (128)
T PLN03058 69 KRLALALKKEFDSAYGPAWHCIVGTSFGSYVTH 101 (128)
T ss_pred HHHHHHHHHHHhhhhCCceEEEECCcEEEEEEE
Confidence 4455666555554433333 3669999987654
No 351
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=21.80 E-value=1.1e+02 Score=24.70 Aligned_cols=61 Identities=11% Similarity=0.038 Sum_probs=30.3
Q ss_pred ccccccccccchhhHHHhhHHhhhh-hhhhhhchHhHHHHhhccCCCC---cEEEEEeccchHHHHHH
Q 025629 14 LQGSWHHLDTEFSLWITLDLAFQQV-FMATFPALTGWLMMSSSIIPTS---KVFLFGQSLGGAVALKV 77 (250)
Q Consensus 14 ~~g~~hg~~~~~~~~~~~~~~l~~~-~~~~~~d~~~~~~~~~~~~~~~---~~~lvGhS~Gg~~a~~~ 77 (250)
|.+-+||.|.+...-..+-++.... -..+...+..++. +.++.+ ..+++..+.|..+++.+
T Consensus 77 ~~~~~hgigr~~~l~~~q~ka~gss~~~~l~~~~e~~~~---~~~G~~~~~~a~~v~~~Tg~al~laL 141 (444)
T TIGR03531 77 HYRFCHGIGRSGDLVAPQPKAAGSSLLYKLTNKLVKDFL---KLLGLRSIKSAFVVPLATGMSLSLCL 141 (444)
T ss_pred ccceecCCCCcccccccCccccCccHHHHHHHHHHHHHH---HHcCCCCCCEEEEECCHHHHHHHHHH
Confidence 4456799888776544444433322 1222333333333 334444 57777766654444433
No 352
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=21.25 E-value=27 Score=27.57 Aligned_cols=38 Identities=21% Similarity=0.199 Sum_probs=32.7
Q ss_pred CCcEEEEEeccchHHHHHHHhhCCCceeeEEEeccccc
Q 025629 59 TSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 96 (250)
Q Consensus 59 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 96 (250)
.++.+--|-|-||+.++.+=.-||+-|++.|....+..
T Consensus 133 ~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 133 PGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred cCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 46899999999999999998889999999997765543
No 353
>PF01221 Dynein_light: Dynein light chain type 1 ; InterPro: IPR001372 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella. The cytoplasmic isoform of dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein is composed of a number of ATP-binding large subunits (see IPR004273 from INTERPRO), intermediate size subunits and small subunits. Among the small subunits, there is a family of highly conserved proteins which make up this family [, ]. Both type 1 (DLC1) and 2 (DLC2) dynein light chains have a similar two-layer alpha-beta core structure consisting of beta-alpha(2)-beta-X-beta(2) [, ].; GO: 0007017 microtubule-based process, 0005875 microtubule associated complex; PDB: 1F95_A 1F96_A 1F3C_A 3P8M_B 2XQQ_C 1RE6_A 1CMI_A 1PWK_A 1PWJ_A 4DS1_C ....
Probab=20.57 E-value=59 Score=19.15 Aligned_cols=30 Identities=13% Similarity=0.232 Sum_probs=18.5
Q ss_pred hchHhHHHHhhccCCCCcEE-EEEeccchHH
Q 025629 44 PALTGWLMMSSSIIPTSKVF-LFGQSLGGAV 73 (250)
Q Consensus 44 ~d~~~~~~~~~~~~~~~~~~-lvGhS~Gg~~ 73 (250)
.+++..+...++..-....+ +||.|+|+.+
T Consensus 36 ~eiA~~iK~~lD~~yG~~Wh~IVG~~Fg~~~ 66 (89)
T PF01221_consen 36 KEIAEFIKQELDKKYGPTWHCIVGKSFGSSV 66 (89)
T ss_dssp HHHHHHHHHHHHHHHSS-EEEEEESEEEEEE
T ss_pred HHHHHHHHHHHhcccCCceEEEECCcEEEEE
Confidence 45666666666655344443 6799999753
No 354
>PF02610 Arabinose_Isome: L-arabinose isomerase; InterPro: IPR003762 The Escherichia coli araBAD operon consists of three genes encoding three enzymes that convert L-arabinose to D-xylulose-5 phosphate. L-arabinose isomerase (AraA) 5.3.1.4 from EC catalyses the conversion of L-arabinose to L-ribulose as the first step in the pathway of L-arabinose utilization as a carbon source [].; GO: 0008733 L-arabinose isomerase activity, 0008152 metabolic process; PDB: 4F2D_A 2AJT_C 2HXG_C.
Probab=20.56 E-value=3.9e+02 Score=21.05 Aligned_cols=64 Identities=19% Similarity=0.179 Sum_probs=30.3
Q ss_pred HHHhccCCCCCEEEEeeCCCcccChHHHH--------------HHHHHhCCCCcEEEEeCCCCcccccCCchHHHHHHHH
Q 025629 169 IERRLEKVSLPLLILHGENDTVTDPSVSK--------------ALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFA 234 (250)
Q Consensus 169 ~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 234 (250)
+...++.+++|++.++-..+.-+|.+... ++......-+.+..++ .||+ +.+ + +.+
T Consensus 89 wI~gl~~l~kPllhl~tQ~~~~ip~~~iDmd~MnlNqsAHgdrEfg~i~~R~gi~~kvV--~G~w---~D~-~----v~~ 158 (359)
T PF02610_consen 89 WIPGLQRLQKPLLHLHTQPNRAIPWDTIDMDFMNLNQSAHGDREFGFIFSRMGIPRKVV--VGHW---QDE-E----VWA 158 (359)
T ss_dssp HHHHHHH--S-EEEEE--SSSS--TTT--HHHHHSS-HHHHHHHHHHHHHHTT--EEEE--ES-T---T-H-H----HHH
T ss_pred HHHHHHHhCCCeEEeecccccCCCcccCCHHHHHHhhcccccHHHHHHHHHhCCCcCeE--eeeC---CCH-H----HHH
Confidence 34566778899999998888777744322 1111111123455666 4786 233 3 889
Q ss_pred HHHHHHhh
Q 025629 235 DIISWLDD 242 (250)
Q Consensus 235 ~i~~fl~~ 242 (250)
.|.+|...
T Consensus 159 ~I~~W~rA 166 (359)
T PF02610_consen 159 EIGDWMRA 166 (359)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999864
No 355
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=20.51 E-value=1.5e+02 Score=20.98 Aligned_cols=41 Identities=20% Similarity=0.119 Sum_probs=29.7
Q ss_pred HHhhccCCCCcEEEEEec-cchHHHHHHHhhCCCceeeEEEeccc
Q 025629 51 MMSSSIIPTSKVFLFGQS-LGGAVALKVHLKQPNAWSGAILVAPM 94 (250)
Q Consensus 51 ~~~~~~~~~~~~~lvGhS-~Gg~~a~~~a~~~p~~v~~lvl~~~~ 94 (250)
.+..+.+...++.++|-. +|+.++..++.. -+..+++++.-
T Consensus 20 ~~~q~~L~~~~V~ViG~GglGs~ia~~La~~---Gvg~i~lvD~D 61 (212)
T PRK08644 20 PKLLEKLKKAKVGIAGAGGLGSNIAVALARS---GVGNLKLVDFD 61 (212)
T ss_pred HHHHHHHhCCCEEEECcCHHHHHHHHHHHHc---CCCeEEEEeCC
Confidence 344556677889999855 788888888754 36788888865
No 356
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=20.24 E-value=1.1e+02 Score=23.18 Aligned_cols=21 Identities=24% Similarity=0.240 Sum_probs=17.7
Q ss_pred CcEEEEEeccchHHHHHHHhh
Q 025629 60 SKVFLFGQSLGGAVALKVHLK 80 (250)
Q Consensus 60 ~~~~lvGhS~Gg~~a~~~a~~ 80 (250)
.+++|+|.|=||.|.-.+...
T Consensus 193 ~~~~LiGFSKGcvVLNqll~E 213 (303)
T PF10561_consen 193 PPLTLIGFSKGCVVLNQLLYE 213 (303)
T ss_pred CceEEEEecCcchHHHHHHHH
Confidence 589999999999998777654
No 357
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=20.04 E-value=2.7e+02 Score=18.33 Aligned_cols=47 Identities=9% Similarity=-0.050 Sum_probs=29.6
Q ss_pred HHHHhhccCCCCcEEEEEeccchHHHHHHHhhCCCceeeEEEecccc
Q 025629 49 WLMMSSSIIPTSKVFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 95 (250)
Q Consensus 49 ~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 95 (250)
.+.+.++..+.+.++++|-+....+...+........+-.|+.+...
T Consensus 89 ~l~~~L~~~gi~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~~ 135 (155)
T cd01014 89 DLEEWLREAGIDHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADACA 135 (155)
T ss_pred CHHHHHHHCCCCEEEEEeeccchhHHHHHHHHHHCCCcEEEeccccc
Confidence 45666777888999999999876666544333222355555555443
Done!