Query 025630
Match_columns 250
No_of_seqs 215 out of 584
Neff 5.3
Searched_HMMs 46136
Date Fri Mar 29 07:49:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025630.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025630hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02436 cellulose synthase A 100.0 1.6E-78 3.4E-83 619.7 21.8 240 5-249 269-520 (1094)
2 PLN02915 cellulose synthase A 100.0 3.3E-78 7.1E-83 617.2 22.3 241 4-249 190-442 (1044)
3 PLN02893 Cellulose synthase-li 100.0 7E-78 1.5E-82 602.3 22.5 240 4-249 9-252 (734)
4 PLN02195 cellulose synthase A 100.0 3.4E-78 7.4E-83 614.2 20.5 241 4-249 155-407 (977)
5 PLN02400 cellulose synthase 100.0 4.5E-78 9.7E-83 617.8 21.0 240 5-249 260-511 (1085)
6 PLN02638 cellulose synthase A 100.0 1.9E-77 4.1E-82 613.0 20.3 240 5-249 253-504 (1079)
7 PLN02189 cellulose synthase 100.0 2E-77 4.4E-82 611.2 18.8 241 4-249 234-486 (1040)
8 PLN02248 cellulose synthase-li 100.0 1E-76 2.2E-81 607.9 22.6 241 5-249 266-559 (1135)
9 PLN02190 cellulose synthase-li 100.0 4.7E-73 1E-77 566.5 22.5 234 4-249 6-241 (756)
10 PF03552 Cellulose_synt: Cellu 100.0 4.9E-55 1.1E-59 435.9 11.6 149 99-249 1-154 (720)
11 PRK11498 bcsA cellulose syntha 99.9 2.6E-21 5.5E-26 199.0 17.2 188 21-214 185-420 (852)
12 TIGR03030 CelA cellulose synth 99.9 1.6E-21 3.5E-26 197.4 15.3 147 21-173 56-208 (713)
13 COG1215 Glycosyltransferases, 98.9 4.8E-09 1E-13 98.1 10.3 90 57-154 16-106 (439)
14 PRK05454 glucosyltransferase M 98.9 3.6E-08 7.9E-13 100.6 16.1 137 20-168 40-189 (691)
15 TIGR03111 glyc2_xrt_Gpos1 puta 98.8 3.3E-08 7.2E-13 95.1 11.3 57 94-154 46-102 (439)
16 PRK14583 hmsR N-glycosyltransf 98.5 7.6E-07 1.7E-11 85.6 10.7 54 94-153 72-125 (444)
17 TIGR03469 HonB hopene-associat 98.3 3.5E-06 7.5E-11 79.7 9.7 56 93-153 36-91 (384)
18 PRK11204 N-glycosyltransferase 98.3 5.3E-06 1.1E-10 78.3 10.0 54 93-152 50-103 (420)
19 cd06421 CESA_CelA_like CESA_Ce 98.2 2.3E-06 5E-11 72.7 6.4 52 97-151 1-52 (234)
20 TIGR03472 HpnI hopanoid biosyn 98.1 1.7E-05 3.7E-10 74.6 10.5 53 94-152 38-90 (373)
21 cd04190 Chitin_synth_C C-termi 98.1 2.1E-06 4.7E-11 75.6 3.0 41 101-144 1-49 (244)
22 cd06427 CESA_like_2 CESA_like_ 98.0 7.6E-06 1.6E-10 71.2 5.8 52 97-152 1-52 (241)
23 cd04191 Glucan_BSP_ModH Glucan 97.9 2.6E-05 5.7E-10 70.4 7.6 42 99-144 1-46 (254)
24 cd06437 CESA_CaSu_A2 Cellulose 97.9 2.7E-05 5.8E-10 67.0 6.0 52 97-153 1-52 (232)
25 PRK14716 bacteriophage N4 adso 97.8 0.00012 2.7E-09 72.5 10.7 56 93-154 62-118 (504)
26 cd06439 CESA_like_1 CESA_like_ 97.8 1.6E-05 3.4E-10 68.8 3.8 56 93-152 25-80 (251)
27 cd06438 EpsO_like EpsO protein 97.8 3.4E-05 7.4E-10 64.2 5.0 46 101-150 1-46 (183)
28 cd04192 GT_2_like_e Subfamily 97.6 7.6E-05 1.6E-09 62.8 5.1 47 101-151 1-47 (229)
29 PF13641 Glyco_tranf_2_3: Glyc 97.6 2.5E-05 5.4E-10 66.5 1.5 50 97-152 1-50 (228)
30 cd02520 Glucosylceramide_synth 97.6 0.00014 2.9E-09 61.4 5.9 50 97-152 1-50 (196)
31 cd04196 GT_2_like_d Subfamily 97.6 0.00013 2.9E-09 60.6 5.6 47 100-152 1-47 (214)
32 cd06435 CESA_NdvC_like NdvC_li 97.5 0.00023 5E-09 61.0 6.4 42 101-147 2-43 (236)
33 cd04184 GT2_RfbC_Mx_like Myxoc 97.5 0.00026 5.6E-09 58.8 6.0 51 97-152 1-51 (202)
34 PRK11234 nfrB bacteriophage N4 97.4 0.00094 2E-08 69.0 10.4 54 93-152 59-113 (727)
35 COG0463 WcaA Glycosyltransfera 97.4 0.00032 7E-09 53.8 5.0 51 96-152 2-52 (291)
36 cd06434 GT2_HAS Hyaluronan syn 97.2 0.0005 1.1E-08 58.6 5.1 47 98-151 1-47 (235)
37 cd02525 Succinoglycan_BP_ExoA 97.2 0.00082 1.8E-08 57.2 5.9 50 99-152 2-51 (249)
38 PRK15489 nfrB bacteriophage N4 97.1 0.0025 5.5E-08 65.7 9.9 50 93-148 67-120 (703)
39 PTZ00260 dolichyl-phosphate be 97.1 0.0035 7.5E-08 58.7 9.6 55 94-152 67-127 (333)
40 cd06423 CESA_like CESA_like is 96.9 0.0013 2.8E-08 51.3 4.6 46 101-152 1-46 (180)
41 cd06433 GT_2_WfgS_like WfgS an 96.9 0.0017 3.8E-08 52.9 5.6 46 101-152 2-47 (202)
42 PF00535 Glycos_transf_2: Glyc 96.9 0.00084 1.8E-08 52.6 3.2 49 100-154 1-49 (169)
43 PRK10073 putative glycosyl tra 96.9 0.0018 4E-08 60.3 5.9 51 96-152 5-55 (328)
44 PRK10018 putative glycosyl tra 96.8 0.0025 5.5E-08 58.3 6.3 44 95-144 3-46 (279)
45 PLN02726 dolichyl-phosphate be 96.8 0.0029 6.3E-08 55.3 5.9 55 94-152 6-60 (243)
46 cd04186 GT_2_like_c Subfamily 96.8 0.0027 5.9E-08 50.2 5.2 47 101-153 1-47 (166)
47 cd06913 beta3GnTL1_like Beta 1 96.7 0.0024 5.2E-08 54.4 5.0 47 101-152 1-47 (219)
48 cd04195 GT2_AmsE_like GT2_AmsE 96.7 0.0037 8.1E-08 51.9 5.9 44 101-149 2-46 (201)
49 cd04185 GT_2_like_b Subfamily 96.7 0.0023 5E-08 53.4 4.7 46 101-152 1-46 (202)
50 cd06436 GlcNAc-1-P_transferase 96.7 0.0023 4.9E-08 54.0 4.5 44 101-151 1-44 (191)
51 cd02522 GT_2_like_a GT_2_like_ 96.7 0.0029 6.3E-08 53.2 4.9 48 99-152 1-48 (221)
52 cd02510 pp-GalNAc-T pp-GalNAc- 96.5 0.0043 9.4E-08 55.9 5.4 49 101-152 2-50 (299)
53 cd06420 GT2_Chondriotin_Pol_N 96.5 0.0057 1.2E-07 49.8 5.5 46 101-152 1-46 (182)
54 PRK10063 putative glycosyl tra 96.4 0.0055 1.2E-07 54.8 5.3 52 97-152 1-53 (248)
55 PRK13915 putative glucosyl-3-p 96.4 0.0059 1.3E-07 56.6 5.5 55 94-152 28-82 (306)
56 cd04179 DPM_DPG-synthase_like 96.2 0.0076 1.6E-07 49.1 4.7 48 101-152 1-48 (185)
57 cd06442 DPM1_like DPM1_like re 96.0 0.011 2.3E-07 49.8 4.7 46 101-151 1-46 (224)
58 cd04188 DPG_synthase DPG_synth 95.7 0.012 2.6E-07 49.8 3.8 48 101-152 1-50 (211)
59 cd04187 DPM1_like_bac Bacteria 95.0 0.044 9.6E-07 45.0 5.1 46 101-152 1-49 (181)
60 cd00761 Glyco_tranf_GTA_type G 95.0 0.055 1.2E-06 40.9 5.2 48 101-154 1-48 (156)
61 PRK10714 undecaprenyl phosphat 94.9 0.038 8.3E-07 51.5 4.9 53 96-154 5-60 (325)
62 cd02511 Beta4Glucosyltransfera 94.4 0.069 1.5E-06 46.4 4.9 42 99-149 2-43 (229)
63 COG2943 MdoH Membrane glycosyl 92.7 6.2 0.00014 40.4 15.9 135 20-168 63-209 (736)
64 cd02526 GT2_RfbF_like RfbF is 90.0 0.47 1E-05 40.3 4.4 37 101-145 1-37 (237)
65 cd02514 GT13_GLCNAC-TI GT13_GL 89.9 0.62 1.4E-05 44.3 5.5 43 100-146 3-45 (334)
66 COG1216 Predicted glycosyltran 85.8 1.6 3.5E-05 39.8 5.5 51 97-153 3-53 (305)
67 KOG2977 Glycosyltransferase [G 84.1 16 0.00036 34.6 11.2 59 98-170 68-132 (323)
68 PF03142 Chitin_synth_2: Chiti 82.2 2.3 5E-05 42.9 5.2 44 93-139 21-65 (527)
69 KOG3738 Predicted polypeptide 70.4 5 0.00011 39.7 3.7 52 93-147 120-171 (559)
70 KOG2978 Dolichol-phosphate man 64.9 6.1 0.00013 35.5 2.9 48 99-149 5-52 (238)
71 TIGR01556 rhamnosyltran L-rham 55.8 16 0.00035 32.3 4.0 32 105-144 2-33 (281)
72 PF03071 GNT-I: GNT-I family; 53.0 15 0.00032 36.4 3.5 48 94-146 90-138 (434)
73 PF10111 Glyco_tranf_2_2: Glyc 49.3 43 0.00093 30.2 5.7 44 101-146 2-48 (281)
74 KOG3737 Predicted polypeptide 49.1 21 0.00045 35.5 3.8 50 92-144 150-199 (603)
75 PF01580 FtsK_SpoIIIE: FtsK/Sp 48.6 75 0.0016 26.9 6.9 75 114-214 52-126 (205)
76 KOG3177 Oligoketide cyclase/li 47.4 12 0.00026 33.8 1.8 40 141-181 77-117 (227)
77 PF15632 ATPgrasp_Ter: ATP-gra 42.5 51 0.0011 31.4 5.3 55 98-169 66-120 (329)
78 COG3151 Uncharacterized protei 40.2 33 0.00072 29.0 3.2 59 95-170 75-140 (147)
79 PRK09121 5-methyltetrahydropte 39.6 88 0.0019 29.6 6.4 53 103-158 275-335 (339)
80 PF02012 BNR: BNR/Asp-box repe 39.1 18 0.0004 18.3 1.0 8 136-143 1-8 (12)
81 PRK05256 condesin subunit E; P 36.9 32 0.00069 31.4 2.8 28 156-183 50-78 (238)
82 COG3095 MukE Uncharacterized p 35.1 29 0.00062 30.9 2.2 28 155-182 47-75 (238)
83 KOG3736 Polypeptide N-acetylga 34.9 21 0.00045 36.6 1.5 51 93-146 138-188 (578)
84 PF06039 Mqo: Malate:quinone o 33.7 1.2E+02 0.0027 30.6 6.6 76 123-205 58-134 (488)
85 PF06853 DUF1249: Protein of u 32.0 39 0.00084 27.5 2.4 22 149-170 96-117 (120)
86 PF08861 DUF1828: Domain of un 31.6 36 0.00078 25.8 2.0 40 134-173 21-64 (90)
87 PF01717 Meth_synt_2: Cobalami 30.9 91 0.002 28.7 5.0 39 103-144 266-304 (324)
88 PF09623 Cas_NE0113: CRISPR-as 30.8 4E+02 0.0088 24.0 10.7 61 101-170 4-64 (224)
89 COG3605 PtsP Signal transducti 29.5 16 0.00035 37.9 -0.3 38 103-143 323-360 (756)
90 PF01644 Chitin_synth_1: Chiti 29.0 1E+02 0.0022 26.7 4.5 43 106-151 2-58 (163)
91 PF11720 Inhibitor_I78: Peptid 27.6 39 0.00085 24.0 1.5 20 123-142 34-53 (60)
92 COG4226 HicB Predicted nucleas 27.4 44 0.00095 27.2 1.9 42 135-176 26-70 (111)
93 PF04580 Pox_D3: Chordopoxviri 26.5 1.9E+02 0.0041 26.7 6.0 61 126-207 182-246 (246)
94 PF08844 DUF1815: Domain of un 26.3 68 0.0015 25.7 2.7 16 125-143 28-43 (105)
95 COG0579 Predicted dehydrogenas 26.1 31 0.00067 34.1 1.0 39 159-205 74-113 (429)
96 PF12344 UvrB: Ultra-violet re 24.8 1.3E+02 0.0029 20.5 3.6 28 147-174 11-38 (44)
97 cd06431 GT8_LARGE_C LARGE cata 23.9 1.6E+02 0.0035 27.1 5.2 42 102-148 5-46 (280)
98 KOG2447 Oligosaccharyltransfer 23.6 3.1E+02 0.0066 25.9 6.9 25 52-76 237-262 (287)
99 TIGR02584 cas_NE0113 CRISPR-as 23.5 1.5E+02 0.0032 26.7 4.7 70 101-174 1-73 (209)
100 PF13704 Glyco_tranf_2_4: Glyc 23.4 63 0.0014 23.9 2.0 33 114-150 5-37 (97)
101 PRK06520 5-methyltetrahydropte 22.5 1.6E+02 0.0035 28.2 5.1 39 103-144 302-340 (368)
102 PF09373 PMBR: Pseudomurein-bi 22.4 1.3E+02 0.0029 18.8 3.1 22 197-218 7-29 (33)
103 PF14829 GPAT_N: Glycerol-3-ph 21.0 93 0.002 23.8 2.5 20 201-220 12-31 (77)
No 1
>PLN02436 cellulose synthase A
Probab=100.00 E-value=1.6e-78 Score=619.71 Aligned_cols=240 Identities=35% Similarity=0.631 Sum_probs=223.8
Q ss_pred CCCCceeeeeccchhH--HHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhceecCCc
Q 025630 5 AYVPLFETKRAKGRVI--RRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRR 82 (250)
Q Consensus 5 ~~~~l~~~~~~~~~~~--~R~~~~~~l~~l~~yl~wR~~tlp~~~~~~~~~w~~l~~aEl~~~~~~~l~~~~~~~P~~R~ 82 (250)
..+||+++.+++++.+ ||+++++++++++++|+||+++.+.+ +.|+|+++++||+||+|+|+|+|+.+|+|++|.
T Consensus 269 ~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~---a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~ 345 (1094)
T PLN02436 269 GRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVND---AYGLWLTSVICEIWFAVSWILDQFPKWYPIERE 345 (1094)
T ss_pred cCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcc---cHHHHHHHHHHHHHHHHHHHHccCcccccccce
Confidence 4568999999998876 99999999999999999999986554 689999999999999999999999999999999
Q ss_pred Ccccchhhccc-----CCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHHH
Q 025630 83 TFKDRLSQRYE-----NDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFA 157 (250)
Q Consensus 83 ~~~d~L~~~~~-----~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~Fa 157 (250)
+++|||++|++ ++||+|||||||+||.||||.+|+|||||+||+|||+|||+|||||||||++||+||.|||+||
T Consensus 346 t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA 425 (1094)
T PLN02436 346 TYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFA 425 (1094)
T ss_pred eCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHH
Confidence 99999999873 3599999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHhHHHhcCccccCCcccccCCCCCCcc----cchhHHHHHHHHHHHHHHHHHHHHhc-CCCChhhhhhccCCCCCCC
Q 025630 158 EHWIPYCKKFYVEPRSPGAYFQSISEPHEA----EEAKGFLAIKKLYEDMENGIITAAKL-GRIPEEVRSKYKGFSQWDS 232 (250)
Q Consensus 158 ~~wvpfC~k~~V~~r~P~~yF~~~~~~~~~----~~~~e~~~~k~~Ye~~k~ri~~~~~~-g~vp~~~~~~~~gf~~w~~ 232 (250)
+.||||||||+|+|||||+||+++.+++++ ...+||+.|||||||||+|||++++. +++|++.|.|++| ++|++
T Consensus 426 k~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dg-t~W~g 504 (1094)
T PLN02436 426 RKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDG-TPWPG 504 (1094)
T ss_pred HhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccC-ccCCC
Confidence 999999999999999999999998776533 35889999999999999999999976 9999999877777 89996
Q ss_pred CCCCCCCcceeeEeccC
Q 025630 233 FFSQRDHDTILQVCPIN 249 (250)
Q Consensus 233 ~~~~~dH~~iiqv~~~n 249 (250)
++++|||+|||||+||
T Consensus 505 -~~~~dHp~IIqVll~~ 520 (1094)
T PLN02436 505 -NNVRDHPGMIQVFLGH 520 (1094)
T ss_pred -CCCCCCccceEEEecC
Confidence 5889999999999986
No 2
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=3.3e-78 Score=617.18 Aligned_cols=241 Identities=35% Similarity=0.597 Sum_probs=221.7
Q ss_pred CCCCCceeeeeccchhH--HHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhceecCC
Q 025630 4 DAYVPLFETKRAKGRVI--RRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYR 81 (250)
Q Consensus 4 ~~~~~l~~~~~~~~~~~--~R~~~~~~l~~l~~yl~wR~~tlp~~~~~~~~~w~~l~~aEl~~~~~~~l~~~~~~~P~~R 81 (250)
+..+||+++.+++++.+ ||+++++++++++++|+||+++ |..+ +.|+|+++++||+||+|+|+|+|+.+|+|++|
T Consensus 190 ~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~-~~~~--a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R 266 (1044)
T PLN02915 190 EARQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILT-PAYD--AYPLWLISVICEIWFALSWILDQFPKWFPINR 266 (1044)
T ss_pred ccCCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcC-cCCC--chHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 34578999999998876 9999999999999999999998 4433 68999999999999999999999999999999
Q ss_pred cCcccchhhcccC-----CCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHH
Q 025630 82 RTFKDRLSQRYEN-----DLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHF 156 (250)
Q Consensus 82 ~~~~d~L~~~~~~-----~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~F 156 (250)
.+++|||++|++. +||+|||||||+||.||||.+|+|||||+||+|||+|||+|||||||||++||+||.|||+|
T Consensus 267 ~t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 346 (1044)
T PLN02915 267 ETYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEF 346 (1044)
T ss_pred ccCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHH
Confidence 9999999988732 39999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHhHHHhcCccccCCcccccCCCCCCccc----chhHHHHHHHHHHHHHHHHHHHHhc-CCCChhhhhhccCCCCCC
Q 025630 157 AEHWIPYCKKFYVEPRSPGAYFQSISEPHEAE----EAKGFLAIKKLYEDMENGIITAAKL-GRIPEEVRSKYKGFSQWD 231 (250)
Q Consensus 157 a~~wvpfC~k~~V~~r~P~~yF~~~~~~~~~~----~~~e~~~~k~~Ye~~k~ri~~~~~~-g~vp~~~~~~~~gf~~w~ 231 (250)
|+.||||||||+|+|||||+||+++.+++.+. ..+||+.|||||||||+|||++++. +++|++.+.|.+| ++|+
T Consensus 347 Ak~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dg-t~W~ 425 (1044)
T PLN02915 347 ARRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDG-TPWP 425 (1044)
T ss_pred HHhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCC-ccCC
Confidence 99999999999999999999999987765333 4789999999999999999999965 9999999777665 9999
Q ss_pred CCCCCCCCcceeeEeccC
Q 025630 232 SFFSQRDHDTILQVCPIN 249 (250)
Q Consensus 232 ~~~~~~dH~~iiqv~~~n 249 (250)
++.+ +|||+|||||+||
T Consensus 426 g~~~-~dHp~IIqVll~~ 442 (1044)
T PLN02915 426 GNNT-RDHPGMIQVYLGS 442 (1044)
T ss_pred CCCC-CCCccceEEeecC
Confidence 7655 8999999999986
No 3
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=7e-78 Score=602.26 Aligned_cols=240 Identities=37% Similarity=0.612 Sum_probs=223.5
Q ss_pred CCCCCceeeeeccchhHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhceecCCcC
Q 025630 4 DAYVPLFETKRAKGRVIRRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRT 83 (250)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~R~~~~~~l~~l~~yl~wR~~tlp~~~~~~~~~w~~l~~aEl~~~~~~~l~~~~~~~P~~R~~ 83 (250)
...+||+++.+.+++.+||+++++++++++.+++||+++++.++ ..|.|+++++||+||+|+|+++|+.+|+|++|.+
T Consensus 9 ~~~~pL~~~~~~~~~~~~R~~~~~~~~~i~~ll~~r~~~~~~~~--~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r~~ 86 (734)
T PLN02893 9 TGAPPLHTCHPMRRTIANRVFAVVYSCAILALLYHHVIALLHST--TTLITLLLLLADIVLAFMWATTQAFRMCPVHRRV 86 (734)
T ss_pred CCCCCceeeeecCCchHHHHHHHHHHHHHHHHHHHHhccccccc--chHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence 45578999999999988999999999999999999999887653 3789999999999999999999999999999999
Q ss_pred cccchhhcc-cCCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHHHHHhHh
Q 025630 84 FKDRLSQRY-ENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIP 162 (250)
Q Consensus 84 ~~d~L~~~~-~~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~Fa~~wvp 162 (250)
++|||+++. +++||+|||||||+||.||||.+|+|||||+||+|||+|||+|||||||||.+||+||.|||+||+.|||
T Consensus 87 ~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~WvP 166 (734)
T PLN02893 87 FIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLP 166 (734)
T ss_pred CHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhhcc
Confidence 999999765 4579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCccccCCcccccCCCCCCcccchhHHHHHHHHHHHHHHHHHHHHhcCCCChhh---hhhccCCCCCCCCCCCCCC
Q 025630 163 YCKKFYVEPRSPGAYFQSISEPHEAEEAKGFLAIKKLYEDMENGIITAAKLGRIPEEV---RSKYKGFSQWDSFFSQRDH 239 (250)
Q Consensus 163 fC~k~~V~~r~P~~yF~~~~~~~~~~~~~e~~~~k~~Ye~~k~ri~~~~~~g~vp~~~---~~~~~gf~~w~~~~~~~dH 239 (250)
|||||||+|||||+||++++. ...+||+.||+||||||+|||++++.|++|++. +.++++|++|++|++++||
T Consensus 167 FCrk~~ie~R~P~~YF~~~~~----~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~dH 242 (734)
T PLN02893 167 FCKKNKIVERCPEAYFSSNSH----SWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQDH 242 (734)
T ss_pred cccccCCCcCCHHHHhccCCC----ccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCCCCCCC
Confidence 999999999999999998732 236799999999999999999999999999886 3455779999999999999
Q ss_pred cceeeEeccC
Q 025630 240 DTILQVCPIN 249 (250)
Q Consensus 240 ~~iiqv~~~n 249 (250)
|+||||++||
T Consensus 243 ~~ivqV~l~~ 252 (734)
T PLN02893 243 PTVIQVLLES 252 (734)
T ss_pred CceeeeeccC
Confidence 9999999986
No 4
>PLN02195 cellulose synthase A
Probab=100.00 E-value=3.4e-78 Score=614.21 Aligned_cols=241 Identities=34% Similarity=0.615 Sum_probs=221.8
Q ss_pred CCCCCceeeeeccchhH--HHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhceecCC
Q 025630 4 DAYVPLFETKRAKGRVI--RRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYR 81 (250)
Q Consensus 4 ~~~~~l~~~~~~~~~~~--~R~~~~~~l~~l~~yl~wR~~tlp~~~~~~~~~w~~l~~aEl~~~~~~~l~~~~~~~P~~R 81 (250)
+..+||+++.+++++.+ ||+++++++++++++|+||+++.+.+ +.|+|+++++||+||+|+|+|+|+.+|+|++|
T Consensus 155 ~~~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~---~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R 231 (977)
T PLN02195 155 DAYEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPVDS---AFGLWLTSVICEIWFAFSWVLDQFPKWSPINR 231 (977)
T ss_pred cccCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCcccc---chHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 34578999999999875 99999999999999999999986654 45999999999999999999999999999999
Q ss_pred cCcccchhhccc-----CCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHH
Q 025630 82 RTFKDRLSQRYE-----NDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHF 156 (250)
Q Consensus 82 ~~~~d~L~~~~~-----~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~F 156 (250)
.+++|||++|++ ++||+|||||||+||.||||.+|+|||||+||+|||+|||+|||||||||.+||+||.|||+|
T Consensus 232 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 311 (977)
T PLN02195 232 ETYIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEF 311 (977)
T ss_pred eECHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHH
Confidence 999999999873 359999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHhHHHhcCccccCCcccccCCCCCCcc----cchhHHHHHHHHHHHHHHHHHHHHhc-CCCChhhhhhccCCCCCC
Q 025630 157 AEHWIPYCKKFYVEPRSPGAYFQSISEPHEA----EEAKGFLAIKKLYEDMENGIITAAKL-GRIPEEVRSKYKGFSQWD 231 (250)
Q Consensus 157 a~~wvpfC~k~~V~~r~P~~yF~~~~~~~~~----~~~~e~~~~k~~Ye~~k~ri~~~~~~-g~vp~~~~~~~~gf~~w~ 231 (250)
|+.||||||||||+|||||+||+++.++.++ ...+||+.|||||||||+|||++++. +++|++.+.|.+ |++|+
T Consensus 312 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d-~t~W~ 390 (977)
T PLN02195 312 ARKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQD-GTPWP 390 (977)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccC-CccCC
Confidence 9999999999999999999999998776533 24889999999999999999999975 899999876655 59999
Q ss_pred CCCCCCCCcceeeEeccC
Q 025630 232 SFFSQRDHDTILQVCPIN 249 (250)
Q Consensus 232 ~~~~~~dH~~iiqv~~~n 249 (250)
+ ++++|||+|||||+++
T Consensus 391 g-~~~~dHp~IIqVll~~ 407 (977)
T PLN02195 391 G-NNTRDHPGMIQVFLGE 407 (977)
T ss_pred C-CCCCCCcchhhhhccC
Confidence 6 5889999999999764
No 5
>PLN02400 cellulose synthase
Probab=100.00 E-value=4.5e-78 Score=617.79 Aligned_cols=240 Identities=35% Similarity=0.639 Sum_probs=222.6
Q ss_pred CCCCceeeeeccch--hHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhceecCCc
Q 025630 5 AYVPLFETKRAKGR--VIRRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRR 82 (250)
Q Consensus 5 ~~~~l~~~~~~~~~--~~~R~~~~~~l~~l~~yl~wR~~tlp~~~~~~~~~w~~l~~aEl~~~~~~~l~~~~~~~P~~R~ 82 (250)
..+||+++.+++++ ..||+++++++++++++|+||+++.+.+ +.|+|+++++||+||+|+|+|+|+.+|+|++|.
T Consensus 260 ~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~~---~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~ 336 (1085)
T PLN02400 260 ARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVKD---AYGLWLTSVICEIWFALSWLLDQFPKWYPINRE 336 (1085)
T ss_pred ccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcc---cHHHHHHHHHHHHHHHHHHHHccCcccccccce
Confidence 35689999999988 3599999999999999999999986554 688999999999999999999999999999999
Q ss_pred Ccccchhhccc-----CCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHHH
Q 025630 83 TFKDRLSQRYE-----NDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFA 157 (250)
Q Consensus 83 ~~~d~L~~~~~-----~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~Fa 157 (250)
+++|||++|++ ++||+|||||||+||.||||.+|+|||||+||+|||+|||+|||||||||++||+||.|||+||
T Consensus 337 t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~FA 416 (1085)
T PLN02400 337 TYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFA 416 (1085)
T ss_pred eCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHH
Confidence 99999999873 3599999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHhHHHhcCccccCCcccccCCCCCCcc----cchhHHHHHHHHHHHHHHHHHHHH-hcCCCChhhhhhccCCCCCCC
Q 025630 158 EHWIPYCKKFYVEPRSPGAYFQSISEPHEA----EEAKGFLAIKKLYEDMENGIITAA-KLGRIPEEVRSKYKGFSQWDS 232 (250)
Q Consensus 158 ~~wvpfC~k~~V~~r~P~~yF~~~~~~~~~----~~~~e~~~~k~~Ye~~k~ri~~~~-~~g~vp~~~~~~~~gf~~w~~ 232 (250)
+.||||||||+|+|||||+||+++.+++++ ...+||+.|||||||||+|||+++ +.+++|++.|.|.+| ++|++
T Consensus 417 ~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dg-t~W~g 495 (1085)
T PLN02400 417 RKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDG-TPWPG 495 (1085)
T ss_pred HhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccC-ccCCC
Confidence 999999999999999999999998776633 347899999999999999999998 789999999777555 99996
Q ss_pred CCCCCCCcceeeEeccC
Q 025630 233 FFSQRDHDTILQVCPIN 249 (250)
Q Consensus 233 ~~~~~dH~~iiqv~~~n 249 (250)
++++|||+|||||+||
T Consensus 496 -~~~~dHp~iIqVll~~ 511 (1085)
T PLN02400 496 -NNPRDHPGMIQVFLGH 511 (1085)
T ss_pred -CCCCCCchhhhhhhcC
Confidence 5889999999999987
No 6
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=1.9e-77 Score=612.95 Aligned_cols=240 Identities=37% Similarity=0.618 Sum_probs=222.2
Q ss_pred CCCCceeeeeccch--hHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhceecCCc
Q 025630 5 AYVPLFETKRAKGR--VIRRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRR 82 (250)
Q Consensus 5 ~~~~l~~~~~~~~~--~~~R~~~~~~l~~l~~yl~wR~~tlp~~~~~~~~~w~~l~~aEl~~~~~~~l~~~~~~~P~~R~ 82 (250)
..+||+++.+++++ ..||+++++++++++++|+||+++.+.+ +.|+|+++++||+||+|+|+|+|+.+|+|++|.
T Consensus 253 ~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~~~---~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R~ 329 (1079)
T PLN02638 253 ARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVRN---AYALWLISVICEIWFALSWILDQFPKWLPVNRE 329 (1079)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccCCc---cHHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 45689999999988 3599999999999999999999986633 689999999999999999999999999999999
Q ss_pred Ccccchhhccc-----CCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHHH
Q 025630 83 TFKDRLSQRYE-----NDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFA 157 (250)
Q Consensus 83 ~~~d~L~~~~~-----~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~Fa 157 (250)
+++|||++|++ ++||+|||||||+||.||||.+|+|||||+||+|||+|||+|||||||||.+||+||.|||+||
T Consensus 330 t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA 409 (1079)
T PLN02638 330 TYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFA 409 (1079)
T ss_pred cCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHH
Confidence 99999999873 3599999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHhHHHhcCccccCCcccccCCCCCCccc----chhHHHHHHHHHHHHHHHHHHHH-hcCCCChhhhhhccCCCCCCC
Q 025630 158 EHWIPYCKKFYVEPRSPGAYFQSISEPHEAE----EAKGFLAIKKLYEDMENGIITAA-KLGRIPEEVRSKYKGFSQWDS 232 (250)
Q Consensus 158 ~~wvpfC~k~~V~~r~P~~yF~~~~~~~~~~----~~~e~~~~k~~Ye~~k~ri~~~~-~~g~vp~~~~~~~~gf~~w~~ 232 (250)
+.||||||||+|+|||||+||+++.+++++. ..+||+.|||||||||+|||+++ +.+++|++.+.|.+| ++|++
T Consensus 410 ~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dg-t~W~g 488 (1079)
T PLN02638 410 RKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDG-TPWPG 488 (1079)
T ss_pred HhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCC-ccCCC
Confidence 9999999999999999999999987765332 47899999999999999999998 789999998777666 99997
Q ss_pred CCCCCCCcceeeEeccC
Q 025630 233 FFSQRDHDTILQVCPIN 249 (250)
Q Consensus 233 ~~~~~dH~~iiqv~~~n 249 (250)
+ +++|||+||||++||
T Consensus 489 ~-~~~dHp~IiqVll~~ 504 (1079)
T PLN02638 489 N-NTRDHPGMIQVFLGH 504 (1079)
T ss_pred C-CCCCCHHHHHHHhcC
Confidence 5 889999999999976
No 7
>PLN02189 cellulose synthase
Probab=100.00 E-value=2e-77 Score=611.22 Aligned_cols=241 Identities=37% Similarity=0.630 Sum_probs=223.0
Q ss_pred CCCCCceeeeeccchhH--HHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhceecCC
Q 025630 4 DAYVPLFETKRAKGRVI--RRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYR 81 (250)
Q Consensus 4 ~~~~~l~~~~~~~~~~~--~R~~~~~~l~~l~~yl~wR~~tlp~~~~~~~~~w~~l~~aEl~~~~~~~l~~~~~~~P~~R 81 (250)
+..+||+++.+++++.+ ||+++++++++++++|+||+++++.+ +.|+|+++++||+||+|+|+|+|+.+|+|++|
T Consensus 234 ~~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~---~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv~R 310 (1040)
T PLN02189 234 EARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVHD---AIGLWLTSIICEIWFAVSWILDQFPKWFPIDR 310 (1040)
T ss_pred cCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcCcc---chHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 34678999999999876 99999999999999999999986544 58999999999999999999999999999999
Q ss_pred cCcccchhhcccC-----CCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHH
Q 025630 82 RTFKDRLSQRYEN-----DLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHF 156 (250)
Q Consensus 82 ~~~~d~L~~~~~~-----~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~F 156 (250)
.+++|||+++++. +||+|||||||+||.||||.+|+|||||+||+|||+|||+|||||||||.+||+||.|||+|
T Consensus 311 ~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 390 (1040)
T PLN02189 311 ETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEF 390 (1040)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 9999999998732 39999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHhHHHhcCccccCCcccccCCCCCCcc----cchhHHHHHHHHHHHHHHHHHHHH-hcCCCChhhhhhccCCCCCC
Q 025630 157 AEHWIPYCKKFYVEPRSPGAYFQSISEPHEA----EEAKGFLAIKKLYEDMENGIITAA-KLGRIPEEVRSKYKGFSQWD 231 (250)
Q Consensus 157 a~~wvpfC~k~~V~~r~P~~yF~~~~~~~~~----~~~~e~~~~k~~Ye~~k~ri~~~~-~~g~vp~~~~~~~~gf~~w~ 231 (250)
|+.||||||||||+|||||+||+++.+++++ ...+||+.||+||||||+|||+++ +.+++|++.+.|.|| ++|+
T Consensus 391 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dG-t~W~ 469 (1040)
T PLN02189 391 ARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDG-TPWP 469 (1040)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccC-ccCC
Confidence 9999999999999999999999998776533 247899999999999999999997 799999998777666 9999
Q ss_pred CCCCCCCCcceeeEeccC
Q 025630 232 SFFSQRDHDTILQVCPIN 249 (250)
Q Consensus 232 ~~~~~~dH~~iiqv~~~n 249 (250)
++ +++|||+||||++||
T Consensus 470 g~-~~~dHp~IiQVll~~ 486 (1040)
T PLN02189 470 GN-NTRDHPGMIQVFLGH 486 (1040)
T ss_pred CC-CCCCCHHHHHHHhcC
Confidence 75 889999999999985
No 8
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=1e-76 Score=607.85 Aligned_cols=241 Identities=34% Similarity=0.649 Sum_probs=217.3
Q ss_pred CCCCceeeeeccchhH--HHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhceecCCc
Q 025630 5 AYVPLFETKRAKGRVI--RRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRR 82 (250)
Q Consensus 5 ~~~~l~~~~~~~~~~~--~R~~~~~~l~~l~~yl~wR~~tlp~~~~~~~~~w~~l~~aEl~~~~~~~l~~~~~~~P~~R~ 82 (250)
..+||+++.+++++.+ ||+++++++++++++|+||+.+ |.. ...|+|+++++||+||+|+|+|+|+.||+|++|.
T Consensus 266 ~~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~-~~~--~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~ 342 (1135)
T PLN02248 266 PWRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRN-PNE--DAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINRA 342 (1135)
T ss_pred CCCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcC-CCC--cchHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 3478999999999876 9999999999999999999998 443 3689999999999999999999999999999999
Q ss_pred Ccccchhhccc----------CCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 83 TFKDRLSQRYE----------NDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 83 ~~~d~L~~~~~----------~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
+++++|+++++ ++||+|||||||+||.||||.+|+|||||+||+|||+|||+|||||||||.+||+||.|
T Consensus 343 t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~E 422 (1135)
T PLN02248 343 TDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAE 422 (1135)
T ss_pred cCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHH
Confidence 99999999874 36999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHhHHHhcCccccCCcccccCCCCCCcc----cchhHHHHHHHHHHHHHHHHHHHHhcCCCC-------hhhh
Q 025630 153 ASHFAEHWIPYCKKFYVEPRSPGAYFQSISEPHEA----EEAKGFLAIKKLYEDMENGIITAAKLGRIP-------EEVR 221 (250)
Q Consensus 153 aa~Fa~~wvpfC~k~~V~~r~P~~yF~~~~~~~~~----~~~~e~~~~k~~Ye~~k~ri~~~~~~g~vp-------~~~~ 221 (250)
||+||+.||||||||+|+|||||+||+++.+++++ ...+||+.|||||||||+|||++++.++++ ++..
T Consensus 423 Aa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~ 502 (1135)
T PLN02248 423 AASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIK 502 (1135)
T ss_pred HHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHHH
Confidence 99999999999999999999999999998776643 348899999999999999999998766555 2211
Q ss_pred -----------------------hhccCCCCCCCC-------CCCCCCcceeeEeccC
Q 025630 222 -----------------------SKYKGFSQWDSF-------FSQRDHDTILQVCPIN 249 (250)
Q Consensus 222 -----------------------~~~~gf~~w~~~-------~~~~dH~~iiqv~~~n 249 (250)
.|.|| ++|+|+ ++++|||+|||||+++
T Consensus 503 ~~~~~~~~~~~~~~e~~~~~~~~wm~dg-t~wpg~W~~~~~~~~~~dH~~IIqVll~~ 559 (1135)
T PLN02248 503 AKKKQRESGGGDPSEPLKVPKATWMADG-THWPGTWLSSAPDHSRGDHAGIIQVMLKP 559 (1135)
T ss_pred hhhhhhhhcccccccccccccceeeccC-CcCCCcccCcccCCCCCCCcceeEEeccC
Confidence 25666 777774 7999999999999763
No 9
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=4.7e-73 Score=566.47 Aligned_cols=234 Identities=34% Similarity=0.578 Sum_probs=210.3
Q ss_pred CCCCCceeeeeccchhHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhceecCCcC
Q 025630 4 DAYVPLFETKRAKGRVIRRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRT 83 (250)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~R~~~~~~l~~l~~yl~wR~~tlp~~~~~~~~~w~~l~~aEl~~~~~~~l~~~~~~~P~~R~~ 83 (250)
...+|||++.+.+++. +|++.++++++++.|++||+++.++.+ ++|+++++||+||+|+|+|+|+.+|+|++|.+
T Consensus 6 ~~~~pL~~~~~~~~~~-~r~~~~~vl~~~~~~l~~R~~~~~~~~----~~W~~~~~~E~wf~~~WlL~q~~kw~pv~r~~ 80 (756)
T PLN02190 6 SSLPPLCERISHKSYF-LRAVDLTILGLLFSLLLYRILHMSEND----TVWLVAFLCESCFSFVWLLITCIKWSPAEYKP 80 (756)
T ss_pred CCCCCceeeeeccchh-HHHHHHHHHHHHHHHHHHHHhCCCccc----HHHHHHHHHHHHHHHHHHHhccceeeecCCCC
Confidence 3557899999999886 899999999999999999999865542 47899999999999999999999999999999
Q ss_pred cccchhhcccCCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHHHHHhHhH
Q 025630 84 FKDRLSQRYENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPY 163 (250)
Q Consensus 84 ~~d~L~~~~~~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~Fa~~wvpf 163 (250)
+|++|+++++ +||+||||||||||.||||++|+|||+|+||+|||+|||+|||||||||++||+||.|||+||+.||||
T Consensus 81 ~p~~l~~r~~-~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~WvPF 159 (756)
T PLN02190 81 YPDRLDERVH-DLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPF 159 (756)
T ss_pred CcHHHHHhhc-cCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhccc
Confidence 9999999975 699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCcccccCCCCC-CcccchhHHHHHHHHHHHHHHHHHHHHhcCCCChhhhhhccC-CCCCCCCCCCCCCcc
Q 025630 164 CKKFYVEPRSPGAYFQSISEP-HEAEEAKGFLAIKKLYEDMENGIITAAKLGRIPEEVRSKYKG-FSQWDSFFSQRDHDT 241 (250)
Q Consensus 164 C~k~~V~~r~P~~yF~~~~~~-~~~~~~~e~~~~k~~Ye~~k~ri~~~~~~g~vp~~~~~~~~g-f~~w~~~~~~~dH~~ 241 (250)
||||||+|||||+||++.... .+....+||+.||+||||||+|||+|+ .|+++. +.+| +..|+ +++++|||+
T Consensus 160 CrK~~IepRaPe~YF~~~~~~~~~~~f~~e~~~~K~eYee~k~ri~~a~-~~~~~~----~~~~~~~~~~-~~~~~dH~~ 233 (756)
T PLN02190 160 CKKYNVRVRAPFRYFLNPPVATEDSEFSKDWEMTKREYEKLSRKVEDAT-GDSHWL----DAEDDFEAFS-NTKPNDHST 233 (756)
T ss_pred ccccCCCcCCHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhhc-cCCCCc----ccCCcccccC-CCCCCCCcc
Confidence 999999999999999985443 223468999999999999999999987 344443 3233 56676 689999999
Q ss_pred eeeEeccC
Q 025630 242 ILQVCPIN 249 (250)
Q Consensus 242 iiqv~~~n 249 (250)
|||||+||
T Consensus 234 iiqVll~~ 241 (756)
T PLN02190 234 IVKVVWEN 241 (756)
T ss_pred ceEEEecC
Confidence 99999986
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=4.9e-55 Score=435.88 Aligned_cols=149 Identities=48% Similarity=0.860 Sum_probs=140.7
Q ss_pred ccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHHHHHhHhHHHhcCccccCCcccc
Q 025630 99 VDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVEPRSPGAYF 178 (250)
Q Consensus 99 VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~Fa~~wvpfC~k~~V~~r~P~~yF 178 (250)
|||||||+||.||||.+|+|||||+||+|||+|||+|||||||||++||+||.||++||+.||||||||+|+|||||+||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccc----chhHHHHHHHHHHHHHHHHHHHHh-cCCCChhhhhhccCCCCCCCCCCCCCCcceeeEeccC
Q 025630 179 QSISEPHEAE----EAKGFLAIKKLYEDMENGIITAAK-LGRIPEEVRSKYKGFSQWDSFFSQRDHDTILQVCPIN 249 (250)
Q Consensus 179 ~~~~~~~~~~----~~~e~~~~k~~Ye~~k~ri~~~~~-~g~vp~~~~~~~~gf~~w~~~~~~~dH~~iiqv~~~n 249 (250)
+++.++.++. ..+||+.|||+|||||.|||++++ .+++|++.|.|+|| ++|++ ++++|||+||||+++|
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~-~~w~~-~~~~dH~~iiqv~~~~ 154 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDG-TPWPG-NTRRDHPGIIQVLLDN 154 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCC-CcCCC-CCCcCChhheEeeccC
Confidence 9987765443 389999999999999999999975 56899999999999 89996 7999999999999986
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=99.87 E-value=2.6e-21 Score=198.98 Aligned_cols=188 Identities=19% Similarity=0.141 Sum_probs=137.0
Q ss_pred HHHHH-HHHHHHHHHHHHHhhc-cCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhceecCCcCcccchhhcccCCCCc
Q 025630 21 RRLFA-ASIFVGIGFIVVYRLS-HRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQRYENDLPG 98 (250)
Q Consensus 21 ~R~~~-~~~l~~l~~yl~wR~~-tlp~~~~~~~~~w~~l~~aEl~~~~~~~l~~~~~~~P~~R~~~~d~L~~~~~~~lP~ 98 (250)
.|++. ++.+++.++|++||++ |+|.++....+++++++++|+++.++.+++.+..++|..|++.+ ++.. .+.+|+
T Consensus 185 ~~~~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~~--~~~~-~~~~P~ 261 (852)
T PRK11498 185 SALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVP--LPKD-MSLWPT 261 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC--CCcc-cCCCCc
Confidence 44444 4445557899999999 88887767778999999999999999999999999999887543 3332 457899
Q ss_pred ccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHH---------------------HHHHHH---
Q 025630 99 VDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFY---------------------ALIEAS--- 154 (250)
Q Consensus 99 VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~---------------------al~eaa--- 154 (250)
|||+||||| ||.+++.+|+.+++++|||.+|+.|||+|||+++-+.+ ++..|-
T Consensus 262 VsViIPtYN---E~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~la~~~~v~yI~R~~n~~gKAGnLN~aL~~a 338 (852)
T PRK11498 262 VDIFVPTYN---EDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQEVGVKYIARPTHEHAKAGNINNALKYA 338 (852)
T ss_pred EEEEEecCC---CcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHHHHHHCCcEEEEeCCCCcchHHHHHHHHHhC
Confidence 999999999 99999999999999999999999999999999986543 112211
Q ss_pred ----------------HHHHHhHhH-HHhcCcc-ccCCcccccCCCCCCccc----chhHHHHHHHHHHHHHHHHHHHHh
Q 025630 155 ----------------HFAEHWIPY-CKKFYVE-PRSPGAYFQSISEPHEAE----EAKGFLAIKKLYEDMENGIITAAK 212 (250)
Q Consensus 155 ----------------~Fa~~wvpf-C~k~~V~-~r~P~~yF~~~~~~~~~~----~~~e~~~~k~~Ye~~k~ri~~~~~ 212 (250)
.|-+.-+++ -++-+|. +++|..||+.++...+.+ .++|.+.+...+++.++..++...
T Consensus 339 ~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~ 418 (852)
T PRK11498 339 KGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFF 418 (852)
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEEcceeccCCchHHHhhHHHhhcccchhHHHHHHHhHHHhhccccc
Confidence 222233443 3445666 788998887665433221 244555666666766666655444
Q ss_pred cC
Q 025630 213 LG 214 (250)
Q Consensus 213 ~g 214 (250)
.|
T Consensus 419 ~G 420 (852)
T PRK11498 419 CG 420 (852)
T ss_pred cc
Confidence 34
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=99.87 E-value=1.6e-21 Score=197.37 Aligned_cols=147 Identities=25% Similarity=0.241 Sum_probs=120.3
Q ss_pred HHHHHHHHHHH-HHHHHHHhhc-cCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhceecCCcCcccchhhcccCCCCc
Q 025630 21 RRLFAASIFVG-IGFIVVYRLS-HRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQRYENDLPG 98 (250)
Q Consensus 21 ~R~~~~~~l~~-l~~yl~wR~~-tlp~~~~~~~~~w~~l~~aEl~~~~~~~l~~~~~~~P~~R~~~~d~L~~~~~~~lP~ 98 (250)
.|++.++.+++ .++|++||++ |+|.++.....++++++++|+++.++.+++.+..++|.+|.+.+. +.. .+.+|+
T Consensus 56 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~--~~~-~~~~P~ 132 (713)
T TIGR03030 56 PRLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPL--PLD-PEEWPT 132 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCC--CCC-cccCCe
Confidence 46655555555 6799999999 888776666678999999999999999999999999998876542 222 467999
Q ss_pred ccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHH----HHHHHHHHHhHhHHHhcCccccC
Q 025630 99 VDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYAL----IEASHFAEHWIPYCKKFYVEPRS 173 (250)
Q Consensus 99 VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al----~eaa~Fa~~wvpfC~k~~V~~r~ 173 (250)
|||+||||| |+++++++|+.|++++|||.+|+.|||+|||+++.|+... .|+.+-+..+..+|+++||....
T Consensus 133 VsViIP~yN---E~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~~v~yi~ 208 (713)
T TIGR03030 133 VDVFIPTYN---EDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLGVNYIT 208 (713)
T ss_pred eEEEEcCCC---CCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHcCcEEEE
Confidence 999999999 9999999999999999999999999999999999987532 33333345678899999998443
No 13
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.94 E-value=4.8e-09 Score=98.12 Aligned_cols=90 Identities=24% Similarity=0.285 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHhhhhceecCCcCcccchhhcccCC-CCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEE
Q 025630 57 LLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQRYEND-LPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSV 135 (250)
Q Consensus 57 l~~aEl~~~~~~~l~~~~~~~P~~R~~~~d~L~~~~~~~-lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~V 135 (250)
++..++..........+....+..+...+..-. .+. +|.|||+||+|| |+++++++|+.|+.++||| ++.|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~vsviiP~yn---E~~~~~~~~l~s~~~~dyp--~~ev 87 (439)
T COG1215 16 LILLLILSIITLLLGYLLLVLPLSRPRKKLPKD---ADKLLPKVSVIIPAYN---EEPEVLEETLESLLSQDYP--RYEV 87 (439)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccccCCCCc---ccccCCceEEEEecCC---CchhhHHHHHHHHHhCCCC--CceE
Confidence 334444444444445555666666544332111 222 699999999999 9999999999999999999 5889
Q ss_pred EEcCCCCchhhHHHHHHHH
Q 025630 136 YLSDDAAHDITFYALIEAS 154 (250)
Q Consensus 136 Yv~DDG~s~~t~~al~eaa 154 (250)
+|+|||+++-+.+-+.+..
T Consensus 88 ivv~d~~~d~~~~~~~~~~ 106 (439)
T COG1215 88 IVVDDGSTDETYEILEELG 106 (439)
T ss_pred EEECCCCChhHHHHHHHHH
Confidence 9999999998887666643
No 14
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=98.91 E-value=3.6e-08 Score=100.57 Aligned_cols=137 Identities=12% Similarity=0.069 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc-cCCCCCCch--H---HHHHHHHHHHHHHHHHHHHHhhhhceecCCcCcc---cchhh
Q 025630 20 IRRLFAASIFVGIGFIVVYRLS-HRPRNGEDG--R---WAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFK---DRLSQ 90 (250)
Q Consensus 20 ~~R~~~~~~l~~l~~yl~wR~~-tlp~~~~~~--~---~~w~~l~~aEl~~~~~~~l~~~~~~~P~~R~~~~---d~L~~ 90 (250)
+.|++.+...++..+|..|+.. .++.++... . .+-.+++..+.+.+...+++.+.... .|.+.. +....
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~~~~~~~~~~ 117 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKYSISASAAGD 117 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcccCCcccccC
Confidence 5678888777888899999999 566543221 1 12245566677766666777665433 221111 00000
Q ss_pred cccCCCCcccEEEeCCCCCCCChHHHHHH----HHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHHHHHhHhHHHh
Q 025630 91 RYENDLPGVDIFVCTADPKTEQPIMVINT----VLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKK 166 (250)
Q Consensus 91 ~~~~~lP~VDVFI~Tynp~~EP~~vv~~T----Vls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~Fa~~wvpfC~k 166 (250)
......|.|+|+||+|| |+++.+..+ +.|..+.||| +++.+||+|||.++-+... |. +.|..+|++
T Consensus 118 ~~~~~~~~VaVliP~yN---Ed~~~v~~~L~a~~~Sl~~~~~~-~~~e~~vLdD~~d~~~~~~--e~----~~~~~L~~~ 187 (691)
T PRK05454 118 PPPPPEARTAILMPIYN---EDPARVFAGLRAMYESLAATGHG-AHFDFFILSDTRDPDIAAA--EE----AAWLELRAE 187 (691)
T ss_pred CCCCCCCceEEEEeCCC---CChHHHHHHHHHHHHHHHhcCCC-CCEEEEEEECCCChhHHHH--HH----HHHHHHHHh
Confidence 11245899999999999 999765555 4555568997 6899999999998765332 21 134457877
Q ss_pred cC
Q 025630 167 FY 168 (250)
Q Consensus 167 ~~ 168 (250)
++
T Consensus 188 ~~ 189 (691)
T PRK05454 188 LG 189 (691)
T ss_pred cC
Confidence 63
No 15
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=98.81 E-value=3.3e-08 Score=95.05 Aligned_cols=57 Identities=21% Similarity=0.419 Sum_probs=51.8
Q ss_pred CCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHH
Q 025630 94 NDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEAS 154 (250)
Q Consensus 94 ~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa 154 (250)
+.+|.|+|+||+|| |+ ..+.+||.|+++.+||.+++.|+|.|||+++-|.+.+.+++
T Consensus 46 ~~~P~vsVIIP~yN---e~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~ 102 (439)
T TIGR03111 46 GKLPDITIIIPVYN---SE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQ 102 (439)
T ss_pred CCCCCEEEEEEeCC---Ch-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHH
Confidence 56899999999999 88 78999999999999999999999999999999987766643
No 16
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=98.50 E-value=7.6e-07 Score=85.61 Aligned_cols=54 Identities=24% Similarity=0.215 Sum_probs=47.4
Q ss_pred CCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHH
Q 025630 94 NDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEA 153 (250)
Q Consensus 94 ~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~ea 153 (250)
+..|.|+|+||+|| |+.. +.+|+.|+++.||| ++.|+|.|||+++-|.+.+.+.
T Consensus 72 ~~~p~vsViIP~yN---E~~~-i~~~l~sll~q~yp--~~eIivVdDgs~D~t~~~~~~~ 125 (444)
T PRK14583 72 KGHPLVSILVPCFN---EGLN-ARETIHAALAQTYT--NIEVIAINDGSSDDTAQVLDAL 125 (444)
T ss_pred CCCCcEEEEEEeCC---CHHH-HHHHHHHHHcCCCC--CeEEEEEECCCCccHHHHHHHH
Confidence 45899999999999 9965 78999999999999 6899999999999887766553
No 17
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=98.30 E-value=3.5e-06 Score=79.65 Aligned_cols=56 Identities=32% Similarity=0.322 Sum_probs=48.7
Q ss_pred cCCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHH
Q 025630 93 ENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEA 153 (250)
Q Consensus 93 ~~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~ea 153 (250)
.+..|.|.|.||+|| |. ..+.+++.|+++.|||. ++.|+|.|||+++-|.+.+.+.
T Consensus 36 ~~~~p~VSVIIpa~N---e~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~ 91 (384)
T TIGR03469 36 PEAWPAVVAVVPARN---EA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAA 91 (384)
T ss_pred CCCCCCEEEEEecCC---cH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHH
Confidence 356899999999999 87 67899999999999995 5899999999999887766553
No 18
>PRK11204 N-glycosyltransferase; Provisional
Probab=98.26 E-value=5.3e-06 Score=78.32 Aligned_cols=54 Identities=30% Similarity=0.338 Sum_probs=47.6
Q ss_pred cCCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 93 ENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 93 ~~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
....|.|.|.||+|| |+ +.+.+|+.|+++.+|| +..|+|.|||+++-|.+.+.+
T Consensus 50 ~~~~p~vsViIp~yn---e~-~~i~~~l~sl~~q~yp--~~eiiVvdD~s~d~t~~~l~~ 103 (420)
T PRK11204 50 LKEYPGVSILVPCYN---EG-ENVEETISHLLALRYP--NYEVIAINDGSSDNTGEILDR 103 (420)
T ss_pred cCCCCCEEEEEecCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCccHHHHHHH
Confidence 356899999999999 87 6789999999999999 688999999999988776655
No 19
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=98.24 E-value=2.3e-06 Score=72.66 Aligned_cols=52 Identities=35% Similarity=0.480 Sum_probs=46.6
Q ss_pred CcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHH
Q 025630 97 PGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALI 151 (250)
Q Consensus 97 P~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~ 151 (250)
|.|.|.||+|| |+++.+..++.|+++.+||.+++.|+|.|||.++-|.+-+.
T Consensus 1 p~vsviip~~n---~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~ 52 (234)
T cd06421 1 PTVDVFIPTYN---EPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAA 52 (234)
T ss_pred CceEEEEecCC---CcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHH
Confidence 78999999999 99899999999999999998889999999999887655433
No 20
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=98.14 E-value=1.7e-05 Score=74.61 Aligned_cols=53 Identities=15% Similarity=0.289 Sum_probs=45.5
Q ss_pred CCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 94 NDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 94 ~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
+..|.|.|+||+|| |.. .+.+|+.|.++.|||. +.|.|.||+.++-|...+.+
T Consensus 38 ~~~p~VSViiP~~n---ee~-~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~ 90 (373)
T TIGR03472 38 RAWPPVSVLKPLHG---DEP-ELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRR 90 (373)
T ss_pred CCCCCeEEEEECCC---CCh-hHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHH
Confidence 44899999999999 986 5789999999999994 88999999999888765544
No 21
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=98.08 E-value=2.1e-06 Score=75.60 Aligned_cols=41 Identities=27% Similarity=0.318 Sum_probs=39.5
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCC--------CCCcEEEEcCCCCch
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYP--------TEKLSVYLSDDAAHD 144 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP--------~~kl~VYv~DDG~s~ 144 (250)
|+||.|| |++.++.+||.|++++||| .+|+.|+|.|||+++
T Consensus 1 v~ip~yN---E~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d 49 (244)
T cd04190 1 VCVTMYN---EDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK 49 (244)
T ss_pred CEEeeec---CCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc
Confidence 6899999 9999999999999999999 899999999999998
No 22
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=98.05 E-value=7.6e-06 Score=71.24 Aligned_cols=52 Identities=29% Similarity=0.285 Sum_probs=47.0
Q ss_pred CcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 97 PGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 97 P~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|.|.|.||+|| |+ ..+..|+.|+++.+||.+++.|.|.|||+++.|...+.+
T Consensus 1 p~vsIiIp~~N---e~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~ 52 (241)
T cd06427 1 PVYTILVPLYK---EA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARA 52 (241)
T ss_pred CeEEEEEecCC---cH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHH
Confidence 78999999999 97 779999999999999988899999999999988776554
No 23
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=97.95 E-value=2.6e-05 Score=70.36 Aligned_cols=42 Identities=12% Similarity=0.256 Sum_probs=35.7
Q ss_pred ccEEEeCCCCCCCChHHHHHHHHHHhc----CCCCCCCcEEEEcCCCCch
Q 025630 99 VDIFVCTADPKTEQPIMVINTVLSVMA----YDYPTEKLSVYLSDDAAHD 144 (250)
Q Consensus 99 VDVFI~Tynp~~EP~~vv~~TVls~la----lDYP~~kl~VYv~DDG~s~ 144 (250)
|.|+||+|| ||+.++.+|+.++.. .||+ .++.|||+|||..+
T Consensus 1 ~SIliP~~n---e~~~~l~~~l~~~~~~~~~~~~~-~~~eI~vldD~~d~ 46 (254)
T cd04191 1 TAIVMPVYN---EDPARVFAGLRAMYESLAKTGLA-DHFDFFILSDTRDP 46 (254)
T ss_pred CEEEEeCCC---CCHHHHHHHHHHHHHHHHhcCCc-CceEEEEECCCCCh
Confidence 679999999 999999999999764 4652 36999999999876
No 24
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=97.87 E-value=2.7e-05 Score=67.00 Aligned_cols=52 Identities=27% Similarity=0.368 Sum_probs=46.1
Q ss_pred CcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHH
Q 025630 97 PGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEA 153 (250)
Q Consensus 97 P~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~ea 153 (250)
|.|.|.||+|| |. +.+.+++.|+++.+||.+++.|.|.|| +++-|...+.+.
T Consensus 1 p~vSViIp~yN---e~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~ 52 (232)
T cd06437 1 PMVTVQLPVFN---EK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREI 52 (232)
T ss_pred CceEEEEecCC---cH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHH
Confidence 67999999999 96 678999999999999999999999998 888888876653
No 25
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=97.83 E-value=0.00012 Score=72.54 Aligned_cols=56 Identities=13% Similarity=0.141 Sum_probs=48.8
Q ss_pred cCCCCcccEEEeCCCCCCCChHHHHHHHHHHh-cCCCCCCCcEEEEcCCCCchhhHHHHHHHH
Q 025630 93 ENDLPGVDIFVCTADPKTEQPIMVINTVLSVM-AYDYPTEKLSVYLSDDAAHDITFYALIEAS 154 (250)
Q Consensus 93 ~~~lP~VDVFI~Tynp~~EP~~vv~~TVls~l-alDYP~~kl~VYv~DDG~s~~t~~al~eaa 154 (250)
....|.|+|+||.|| |. .++.+||.+++ ++||| ++.|+|.||++++-|...+.+.+
T Consensus 62 ~~~~p~vaIlIPA~N---E~-~vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T~~~v~~l~ 118 (504)
T PRK14716 62 SVPEKRIAIFVPAWR---EA-DVIGRMLEHNLATLDYE--NYRIFVGTYPNDPATLREVDRLA 118 (504)
T ss_pred cCCCCceEEEEeccC---ch-hHHHHHHHHHHHcCCCC--CeEEEEEECCCChhHHHHHHHHH
Confidence 345999999999999 97 68999999964 79997 89999999999999988777744
No 26
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=97.82 E-value=1.6e-05 Score=68.82 Aligned_cols=56 Identities=25% Similarity=0.389 Sum_probs=48.9
Q ss_pred cCCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 93 ENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 93 ~~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
.+..|.|-|.||||| |+ ..+.+++.|+.+.+||.+++.|+|+|||+++.|...+.+
T Consensus 25 ~~~~~~isVvip~~n---~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~ 80 (251)
T cd06439 25 PAYLPTVTIIIPAYN---EE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIARE 80 (251)
T ss_pred CCCCCEEEEEEecCC---cH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHH
Confidence 456899999999999 87 678999999999999988899999999999877665544
No 27
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=97.78 E-value=3.4e-05 Score=64.25 Aligned_cols=46 Identities=30% Similarity=0.409 Sum_probs=41.3
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYAL 150 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al 150 (250)
|+||+|| |+ ..+..|+-++++.+||.+++.|+|.|||+++-|...+
T Consensus 1 VvIp~~n---e~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~ 46 (183)
T cd06438 1 ILIPAHN---EE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVA 46 (183)
T ss_pred CEEeccc---hH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHH
Confidence 6899999 98 7899999999999999888999999999998776543
No 28
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.64 E-value=7.6e-05 Score=62.80 Aligned_cols=47 Identities=32% Similarity=0.404 Sum_probs=41.8
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALI 151 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~ 151 (250)
|+||||| |+ ..+.+||.|++..+||.+++.|+|.|||+++-|...+.
T Consensus 1 viip~~n---~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~ 47 (229)
T cd04192 1 VVIAARN---EA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILE 47 (229)
T ss_pred CEEEecC---cH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHH
Confidence 6899999 87 77999999999999998889999999999987766544
No 29
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=97.59 E-value=2.5e-05 Score=66.47 Aligned_cols=50 Identities=30% Similarity=0.449 Sum_probs=37.4
Q ss_pred CcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 97 PGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 97 P~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|.|.|.||+|| |+. .+.+|+.|+++.+|| ++.|+|+|||+++-+...+.+
T Consensus 1 P~v~Vvip~~~---~~~-~l~~~l~sl~~~~~~--~~~v~vvd~~~~~~~~~~~~~ 50 (228)
T PF13641_consen 1 PRVSVVIPAYN---EDD-VLRRCLESLLAQDYP--RLEVVVVDDGSDDETAEILRA 50 (228)
T ss_dssp --EEEE--BSS----HH-HHHHHHHHHTTSHHH--TEEEEEEEE-SSS-GCTTHHH
T ss_pred CEEEEEEEecC---CHH-HHHHHHHHHHcCCCC--CeEEEEEECCCChHHHHHHHH
Confidence 78999999999 885 889999999999996 699999999998877655443
No 30
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=97.58 E-value=0.00014 Score=61.42 Aligned_cols=50 Identities=20% Similarity=0.341 Sum_probs=43.5
Q ss_pred CcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 97 PGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 97 P~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|.|.|.||+|| |... +.+++-|.++.+||. +.++|.|||+++-|...+.+
T Consensus 1 p~vsviip~~n---~~~~-l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~ 50 (196)
T cd02520 1 PGVSILKPLCG---VDPN-LYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRK 50 (196)
T ss_pred CCeEEEEecCC---CCcc-HHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHH
Confidence 77999999999 8764 789999999999994 89999999999887765554
No 31
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.57 E-value=0.00013 Score=60.64 Aligned_cols=47 Identities=21% Similarity=0.282 Sum_probs=41.5
Q ss_pred cEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 100 DIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 100 DVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
.|.||||| |+ ..+.+++.|++..+|| ++.|+|+|||+++-|...+.+
T Consensus 1 sIvIp~yn---~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~ 47 (214)
T cd04196 1 AVLMATYN---GE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKE 47 (214)
T ss_pred CEEEEecC---cH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHH
Confidence 47999999 88 6789999999999999 799999999999988766555
No 32
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=97.51 E-value=0.00023 Score=60.95 Aligned_cols=42 Identities=36% Similarity=0.502 Sum_probs=38.9
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITF 147 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~ 147 (250)
|+||||| |+++.+.+++.|++.++|| +..|+|.|||+++-|.
T Consensus 2 iiip~~n---e~~~~l~~~l~sl~~q~~~--~~eiiVvdd~s~D~t~ 43 (236)
T cd06435 2 IHVPCYE---EPPEMVKETLDSLAALDYP--NFEVIVIDNNTKDEAL 43 (236)
T ss_pred eeEeeCC---CcHHHHHHHHHHHHhCCCC--CcEEEEEeCCCCchhH
Confidence 7899999 9999999999999999999 5789999999998775
No 33
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=97.47 E-value=0.00026 Score=58.84 Aligned_cols=51 Identities=22% Similarity=0.333 Sum_probs=43.9
Q ss_pred CcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 97 PGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 97 P~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|.|.|.||||| |....+.+|+.|+++..|| .+.|.|+|||.++-+...+.+
T Consensus 1 p~vsiii~~~n---~~~~~l~~~l~sl~~q~~~--~~eiivvd~gs~d~~~~~~~~ 51 (202)
T cd04184 1 PLISIVMPVYN---TPEKYLREAIESVRAQTYP--NWELCIADDASTDPEVKRVLK 51 (202)
T ss_pred CeEEEEEeccc---CcHHHHHHHHHHHHhCcCC--CeEEEEEeCCCCChHHHHHHH
Confidence 67999999999 8878899999999999998 578999999998866655444
No 34
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=97.41 E-value=0.00094 Score=69.04 Aligned_cols=54 Identities=15% Similarity=0.118 Sum_probs=43.3
Q ss_pred cCCCCcccEEEeCCCCCCCChHHHHHHHHHHh-cCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 93 ENDLPGVDIFVCTADPKTEQPIMVINTVLSVM-AYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 93 ~~~lP~VDVFI~Tynp~~EP~~vv~~TVls~l-alDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
++..|.|.|+||.|| |. .++.+|+.+++ ++||| ++.|+|.||+..+-|...+.+
T Consensus 59 ~~~~~~vsIlVPa~n---E~-~vi~~~i~~ll~~ldYP--~~eI~vi~~~nD~~T~~~~~~ 113 (727)
T PRK11234 59 KPDEKPLAIMVPAWN---ET-GVIGNMAELAATTLDYE--NYHIFVGTYPNDPATQADVDA 113 (727)
T ss_pred cCCCCCEEEEEecCc---ch-hhHHHHHHHHHHhCCCC--CeEEEEEecCCChhHHHHHHH
Confidence 456799999999999 98 78999999887 79999 499999976555555554444
No 35
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=97.36 E-value=0.00032 Score=53.79 Aligned_cols=51 Identities=24% Similarity=0.344 Sum_probs=44.7
Q ss_pred CCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 96 LPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 96 lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
.|.+-|.||||| |+ ..+.++|.|++...|+. ..|.|.|||+++-|-+-+.+
T Consensus 2 ~~~~siiip~~n---~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~~~~~ 52 (291)
T COG0463 2 MPKVSVVIPTYN---EE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTEIAIE 52 (291)
T ss_pred CccEEEEEeccc---hh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHHHHHH
Confidence 578999999999 77 89999999999999995 56999999999988775544
No 36
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=97.22 E-value=0.0005 Score=58.56 Aligned_cols=47 Identities=19% Similarity=0.313 Sum_probs=41.4
Q ss_pred cccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHH
Q 025630 98 GVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALI 151 (250)
Q Consensus 98 ~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~ 151 (250)
+|+|.||||| |++..+.+|+.|+.+.+ | ..|+|+|||.++-+-..+.
T Consensus 1 ~isVvIp~~n---e~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~ 47 (235)
T cd06434 1 DVTVIIPVYD---EDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILS 47 (235)
T ss_pred CeEEEEeecC---CChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHH
Confidence 4899999999 99999999999999998 4 6799999999987766553
No 37
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=97.18 E-value=0.00082 Score=57.21 Aligned_cols=50 Identities=20% Similarity=0.306 Sum_probs=43.2
Q ss_pred ccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 99 VDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 99 VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|.|.||||| |+ ..+.+++.++++.+||..+..|+|.|||+++-|..-+.+
T Consensus 2 ~sIiip~~n---~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~ 51 (249)
T cd02525 2 VSIIIPVRN---EE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQE 51 (249)
T ss_pred EEEEEEcCC---ch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHH
Confidence 789999999 87 567999999999999988899999999999877554444
No 38
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=97.13 E-value=0.0025 Score=65.71 Aligned_cols=50 Identities=18% Similarity=0.288 Sum_probs=42.0
Q ss_pred cCCCCcccEEEeCCCCCCCChHHHHHHHHHHh-cCCCCCCCcEEEE---cCCCCchhhHH
Q 025630 93 ENDLPGVDIFVCTADPKTEQPIMVINTVLSVM-AYDYPTEKLSVYL---SDDAAHDITFY 148 (250)
Q Consensus 93 ~~~lP~VDVFI~Tynp~~EP~~vv~~TVls~l-alDYP~~kl~VYv---~DDG~s~~t~~ 148 (250)
+.+.|.|.|+||.|| |. +++.+||.+++ ++||| ++.|+| -|||.+.....
T Consensus 67 ~~~~~~vsIlVPa~n---E~-~VI~~~v~~ll~~ldYp--~~~I~v~~~~nD~~T~~~~~ 120 (703)
T PRK15489 67 ERDEQPLAIMVPAWK---EY-DVIAKMIENMLATLDYR--RYVIFVGTYPNDAETITEVE 120 (703)
T ss_pred ccCCCceEEEEeCCC---cH-HHHHHHHHHHHhcCCCC--CeEEEEEecCCCccHHHHHH
Confidence 456899999999999 98 89999999986 89999 678999 69996654444
No 39
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=97.08 E-value=0.0035 Score=58.65 Aligned_cols=55 Identities=15% Similarity=0.233 Sum_probs=41.6
Q ss_pred CCCCcccEEEeCCCCCCCChHHHHHHHHHHhcC------CCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 94 NDLPGVDIFVCTADPKTEQPIMVINTVLSVMAY------DYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 94 ~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lal------DYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
+..|.|+|.||+|| |... +..++.++.+. ++|.....|+|.|||+++-|.+-+.+
T Consensus 67 ~~~~~isVVIP~yN---e~~~-i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~ 127 (333)
T PTZ00260 67 DSDVDLSIVIPAYN---EEDR-LPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKD 127 (333)
T ss_pred CCCeEEEEEEeeCC---CHHH-HHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHH
Confidence 45789999999999 8754 56666665542 34556789999999999988775544
No 40
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=96.94 E-value=0.0013 Score=51.27 Aligned_cols=46 Identities=39% Similarity=0.531 Sum_probs=40.2
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|.||||| |+ ..+.+|+.|++...|+ ...|+|.|||+++.|...+.+
T Consensus 1 Viip~~n---~~-~~l~~~l~sl~~q~~~--~~~iivvdd~s~d~t~~~~~~ 46 (180)
T cd06423 1 IIVPAYN---EE-AVIERTIESLLALDYP--KLEVIVVDDGSTDDTLEILEE 46 (180)
T ss_pred CeecccC---hH-HHHHHHHHHHHhCCCC--ceEEEEEeCCCccchHHHHHH
Confidence 5799999 88 8999999999999996 678999999999888775554
No 41
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=96.94 E-value=0.0017 Score=52.86 Aligned_cols=46 Identities=22% Similarity=0.265 Sum_probs=40.0
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|+||||| ++ ..+.+++.|+++..||. +.|+|.|||+++-|.+-+.+
T Consensus 2 ivi~~~n---~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~ 47 (202)
T cd06433 2 IITPTYN---QA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKK 47 (202)
T ss_pred EEEeccc---hH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHH
Confidence 7899999 87 78999999999999984 88999999999887765544
No 42
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=96.89 E-value=0.00084 Score=52.58 Aligned_cols=49 Identities=22% Similarity=0.240 Sum_probs=38.8
Q ss_pred cEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHH
Q 025630 100 DIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEAS 154 (250)
Q Consensus 100 DVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa 154 (250)
.|.||||| | +..+.+|+.|++...++ ...|+|.|||+++-|...+.+..
T Consensus 1 Svvip~~n---~-~~~l~~~l~sl~~q~~~--~~eiivvdd~s~d~~~~~~~~~~ 49 (169)
T PF00535_consen 1 SVVIPTYN---E-AEYLERTLESLLKQTDP--DFEIIVVDDGSTDETEEILEEYA 49 (169)
T ss_dssp EEEEEESS-----TTTHHHHHHHHHHHSGC--EEEEEEEECS-SSSHHHHHHHHH
T ss_pred CEEEEeeC---C-HHHHHHHHHHHhhccCC--CEEEEEecccccccccccccccc
Confidence 48999999 8 57889999999998555 78899999999888876666643
No 43
>PRK10073 putative glycosyl transferase; Provisional
Probab=96.89 E-value=0.0018 Score=60.26 Aligned_cols=51 Identities=14% Similarity=0.157 Sum_probs=44.6
Q ss_pred CCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 96 LPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 96 lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
-|.|.|.||+|| ++ ..+.+|+.|+++..|+ .+.|.|.|||+++-|..-+.+
T Consensus 5 ~p~vSVIIP~yN---~~-~~L~~~l~Sl~~Qt~~--~~EIIiVdDgStD~t~~i~~~ 55 (328)
T PRK10073 5 TPKLSIIIPLYN---AG-KDFRAFMESLIAQTWT--ALEIIIVNDGSTDNSVEIAKH 55 (328)
T ss_pred CCeEEEEEeccC---CH-HHHHHHHHHHHhCCCC--CeEEEEEeCCCCccHHHHHHH
Confidence 588999999999 76 6899999999999998 688999999999877665544
No 44
>PRK10018 putative glycosyl transferase; Provisional
Probab=96.84 E-value=0.0025 Score=58.33 Aligned_cols=44 Identities=27% Similarity=0.471 Sum_probs=38.9
Q ss_pred CCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCch
Q 025630 95 DLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHD 144 (250)
Q Consensus 95 ~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~ 144 (250)
..|.|-|.||||| ++.. +.+|+.|+++..|| .+.+.|.|||+++
T Consensus 3 ~~p~VSVIip~yN---~~~~-l~~~l~Svl~Qt~~--~~EiIVVDDgS~~ 46 (279)
T PRK10018 3 DNPLISIYMPTWN---RQQL-AIRAIKSVLRQDYS--NWEMIIVDDCSTS 46 (279)
T ss_pred CCCEEEEEEEeCC---CHHH-HHHHHHHHHhCCCC--CeEEEEEECCCCC
Confidence 4688999999999 8864 57999999999999 6899999999983
No 45
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=96.77 E-value=0.0029 Score=55.27 Aligned_cols=55 Identities=16% Similarity=0.093 Sum_probs=38.5
Q ss_pred CCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 94 NDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 94 ~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
...|.|.|.||+|| |... +..++.++.........+.|+|.|||+++-|.+.+.+
T Consensus 6 ~~~~~vsVvIp~yn---e~~~-l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~ 60 (243)
T PLN02726 6 EGAMKYSIIVPTYN---ERLN-IALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQ 60 (243)
T ss_pred CCCceEEEEEccCC---chhh-HHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHH
Confidence 45789999999999 8754 3445444432211223789999999999988776554
No 46
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=96.76 E-value=0.0027 Score=50.19 Aligned_cols=47 Identities=23% Similarity=0.295 Sum_probs=40.3
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEA 153 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~ea 153 (250)
|.||+|| | +..+.+|+.|..+.+|| +..++|.|||+.+-+.+.+.+.
T Consensus 1 vii~~~~---~-~~~l~~~l~sl~~~~~~--~~~iiivdd~s~~~~~~~~~~~ 47 (166)
T cd04186 1 IIIVNYN---S-LEYLKACLDSLLAQTYP--DFEVIVVDNASTDGSVELLREL 47 (166)
T ss_pred CEEEecC---C-HHHHHHHHHHHHhccCC--CeEEEEEECCCCchHHHHHHHh
Confidence 5799999 8 58899999999999995 6779999999998877776653
No 47
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=96.73 E-value=0.0024 Score=54.40 Aligned_cols=47 Identities=17% Similarity=0.203 Sum_probs=40.5
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|.||+|| +. ..+..|+-|+++..|| +.+.|.|.|||+++-|...+.+
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~~i~~~ 47 (219)
T cd06913 1 IILPVHN---GE-QWLDECLESVLQQDFE-GTLELSVFNDASTDKSAEIIEK 47 (219)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHHHHHHH
Confidence 6799999 75 7999999999999998 4689999999999988765544
No 48
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=96.71 E-value=0.0037 Score=51.91 Aligned_cols=44 Identities=14% Similarity=0.220 Sum_probs=36.4
Q ss_pred EEEeCCCCCCCC-hHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHH
Q 025630 101 IFVCTADPKTEQ-PIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYA 149 (250)
Q Consensus 101 VFI~Tynp~~EP-~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~a 149 (250)
|.||||| |. ++.+.+|+.|+++.+|| ...+.|.|||++.-+...
T Consensus 2 viip~~n---~~~~~~l~~~l~Sl~~q~~~--~~eiiivdd~ss~d~t~~ 46 (201)
T cd04195 2 VLMSVYI---KEKPEFLREALESILKQTLP--PDEVVLVKDGPVTQSLNE 46 (201)
T ss_pred EEEEccc---cchHHHHHHHHHHHHhcCCC--CcEEEEEECCCCchhHHH
Confidence 7899999 65 68999999999999999 457899999986544433
No 49
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=96.71 E-value=0.0023 Score=53.44 Aligned_cols=46 Identities=20% Similarity=0.136 Sum_probs=39.2
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|+||||| |+ ..+.+++.|+++..|| ...|+|.|||+++.|...+.+
T Consensus 1 viI~~~n---~~-~~l~~~l~sl~~q~~~--~~eiiivD~~s~d~t~~~~~~ 46 (202)
T cd04185 1 AVVVTYN---RL-DLLKECLDALLAQTRP--PDHIIVIDNASTDGTAEWLTS 46 (202)
T ss_pred CEEEeeC---CH-HHHHHHHHHHHhccCC--CceEEEEECCCCcchHHHHHH
Confidence 6899999 87 7799999999999999 456999999999877765544
No 50
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=96.68 E-value=0.0023 Score=54.03 Aligned_cols=44 Identities=25% Similarity=0.324 Sum_probs=38.6
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALI 151 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~ 151 (250)
|+||+|| |. ..+.+|+.|+++.+ | ++.|+|.|||+++-|...+.
T Consensus 1 ViIp~~N---e~-~~l~~~l~sl~~~~-~--~~eIivvdd~S~D~t~~~~~ 44 (191)
T cd06436 1 VLVPCLN---EE-AVIQRTLASLLRNK-P--NFLVLVIDDASDDDTAGIVR 44 (191)
T ss_pred CEEeccc---cH-HHHHHHHHHHHhCC-C--CeEEEEEECCCCcCHHHHHh
Confidence 6899999 98 78999999999998 5 68899999999998876554
No 51
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=96.66 E-value=0.0029 Score=53.23 Aligned_cols=48 Identities=17% Similarity=0.128 Sum_probs=41.1
Q ss_pred ccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 99 VDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 99 VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|.|.||+|| |+. .+.+|+.|+++..|+ +..|+|.|||+++-|.+.+.+
T Consensus 1 vsvii~~~n---~~~-~l~~~l~sl~~q~~~--~~evivvdd~s~d~~~~~~~~ 48 (221)
T cd02522 1 LSIIIPTLN---EAE-NLPRLLASLRRLNPL--PLEIIVVDGGSTDGTVAIARS 48 (221)
T ss_pred CEEEEEccC---cHH-HHHHHHHHHHhccCC--CcEEEEEeCCCCccHHHHHhc
Confidence 579999999 875 789999999999985 788999999999888775544
No 52
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=96.51 E-value=0.0043 Score=55.94 Aligned_cols=49 Identities=22% Similarity=0.256 Sum_probs=43.7
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|.||||| |+++.+.+|+.|+++-.||.....|.|.|||+++-|...+.+
T Consensus 2 IIIp~~N---~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~ 50 (299)
T cd02510 2 VIIIFHN---EALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLE 50 (299)
T ss_pred EEEEEec---CcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHH
Confidence 7899999 998999999999999999866679999999999988886654
No 53
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=96.49 E-value=0.0057 Score=49.84 Aligned_cols=46 Identities=17% Similarity=0.171 Sum_probs=38.5
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|.||+|| |+ ..+.+|+-|+++..|+ ...|.|.|||+++-|...+.+
T Consensus 1 ivip~~n---~~-~~l~~~l~sl~~q~~~--~~eiivvdd~s~d~t~~~~~~ 46 (182)
T cd06420 1 LIITTYN---RP-EALELVLKSVLNQSIL--PFEVIIADDGSTEETKELIEE 46 (182)
T ss_pred CEEeecC---Ch-HHHHHHHHHHHhccCC--CCEEEEEeCCCchhHHHHHHH
Confidence 5799999 88 5689999999999988 567999999999877655443
No 54
>PRK10063 putative glycosyl transferase; Provisional
Probab=96.40 E-value=0.0055 Score=54.75 Aligned_cols=52 Identities=13% Similarity=0.031 Sum_probs=41.7
Q ss_pred CcccEEEeCCCCCCCChHHHHHHHHHHhcC-CCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 97 PGVDIFVCTADPKTEQPIMVINTVLSVMAY-DYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 97 P~VDVFI~Tynp~~EP~~vv~~TVls~lal-DYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|.|-|.||||| |. ..+..|+.|+.++ ..+...+.|.|.|||+++-|.+-+.+
T Consensus 1 ~~vSVIi~~yN---~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~ 53 (248)
T PRK10063 1 MLLSVITVAFR---NL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLEN 53 (248)
T ss_pred CeEEEEEEeCC---CH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHH
Confidence 56899999999 85 5789999999764 33334789999999999988776554
No 55
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=96.38 E-value=0.0059 Score=56.59 Aligned_cols=55 Identities=15% Similarity=0.003 Sum_probs=42.3
Q ss_pred CCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 94 NDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 94 ~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
..-|.|.|.||+|| |. ..+.+++.++.+..+......|.|.|||+++-|..-+.+
T Consensus 28 ~~~~~vSVVIPayN---ee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~ 82 (306)
T PRK13915 28 KAGRTVSVVLPALN---EE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAA 82 (306)
T ss_pred cCCCCEEEEEecCC---cH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHH
Confidence 35789999999999 87 457788888877554222468999999999988765444
No 56
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=96.20 E-value=0.0076 Score=49.14 Aligned_cols=48 Identities=17% Similarity=0.079 Sum_probs=41.0
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|.||||| |+ ..+.+|+.|+....|+.....|+|.|||+++-|...+.+
T Consensus 1 iii~~~n---~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~ 48 (185)
T cd04179 1 VVIPAYN---EE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARE 48 (185)
T ss_pred CeecccC---hH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHH
Confidence 5799999 87 678999999999999666789999999999877666554
No 57
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=95.98 E-value=0.011 Score=49.84 Aligned_cols=46 Identities=17% Similarity=0.048 Sum_probs=37.6
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALI 151 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~ 151 (250)
|.||||| |+ ..+.+|+-|+....| ...+.|+|.|||+++-|...+.
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~-~~~~eiiiVDd~S~d~t~~~~~ 46 (224)
T cd06442 1 IIIPTYN---ER-ENIPELIERLDAALK-GIDYEIIVVDDNSPDGTAEIVR 46 (224)
T ss_pred CeEeccc---hh-hhHHHHHHHHHHhhc-CCCeEEEEEeCCCCCChHHHHH
Confidence 6799999 87 557899999998888 2468999999999987766443
No 58
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=95.68 E-value=0.012 Score=49.76 Aligned_cols=48 Identities=17% Similarity=0.167 Sum_probs=37.1
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCC--CCCCcEEEEcCCCCchhhHHHHHH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDY--PTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDY--P~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|.||+|| |. ..+..++-+++...+ +.....|+|+|||+++-|...+.+
T Consensus 1 iiip~yN---~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~ 50 (211)
T cd04188 1 VVIPAYN---EE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARK 50 (211)
T ss_pred CEEcccC---hH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHH
Confidence 5799999 87 567888888777654 445789999999999887765544
No 59
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=95.03 E-value=0.044 Score=44.96 Aligned_cols=46 Identities=20% Similarity=0.106 Sum_probs=31.7
Q ss_pred EEEeCCCCCCCChHHHHHHHHHH---hcCCCCCCCcEEEEcCCCCchhhHHHHHH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSV---MAYDYPTEKLSVYLSDDAAHDITFYALIE 152 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~---lalDYP~~kl~VYv~DDG~s~~t~~al~e 152 (250)
|.||||| |+ ..+.+++.+. ..-.++ .+.|+|.|||+++-|.+.+.+
T Consensus 1 viIp~~n---~~-~~l~~~l~sl~~~~~~~~~--~~eiivvdd~s~d~t~~~~~~ 49 (181)
T cd04187 1 IVVPVYN---EE-ENLPELYERLKAVLESLGY--DYEIIFVDDGSTDRTLEILRE 49 (181)
T ss_pred CEEeecC---ch-hhHHHHHHHHHHHHHhcCC--CeEEEEEeCCCCccHHHHHHH
Confidence 6799999 77 4455554444 333344 688999999999887665444
No 60
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=95.00 E-value=0.055 Score=40.91 Aligned_cols=48 Identities=25% Similarity=0.350 Sum_probs=40.2
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHH
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEAS 154 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa 154 (250)
|.||+|| |+ ..+..|+.+++..+|+ ...++|+|||.++.+...+.+..
T Consensus 1 iii~~~~---~~-~~l~~~l~s~~~~~~~--~~~i~i~~~~~~~~~~~~~~~~~ 48 (156)
T cd00761 1 VIIPAYN---EE-PYLERCLESLLAQTYP--NFEVIVVDDGSTDGTLEILEEYA 48 (156)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCcc--ceEEEEEeCCCCccHHHHHHHHH
Confidence 5799999 75 6789999999999995 67799999999987777666654
No 61
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=94.94 E-value=0.038 Score=51.46 Aligned_cols=53 Identities=19% Similarity=0.258 Sum_probs=36.7
Q ss_pred CCcccEEEeCCCCCCCChHHHHHHH---HHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHH
Q 025630 96 LPGVDIFVCTADPKTEQPIMVINTV---LSVMAYDYPTEKLSVYLSDDAAHDITFYALIEAS 154 (250)
Q Consensus 96 lP~VDVFI~Tynp~~EP~~vv~~TV---ls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa 154 (250)
.+.|.|.||+|| |... +..++ .+++.- . .....|.|.|||+++-|.+.+.+.+
T Consensus 5 ~~~vSVVIP~yN---E~~~-i~~~l~~l~~~~~~-~-~~~~EIIvVDDgS~D~T~~il~~~~ 60 (325)
T PRK10714 5 IKKVSVVIPVYN---EQES-LPELIRRTTAACES-L-GKEYEILLIDDGSSDNSAEMLVEAA 60 (325)
T ss_pred CCeEEEEEcccC---chhh-HHHHHHHHHHHHHh-C-CCCEEEEEEeCCCCCcHHHHHHHHH
Confidence 466999999999 8743 33333 333321 1 1357899999999999988777644
No 62
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=94.40 E-value=0.069 Score=46.36 Aligned_cols=42 Identities=17% Similarity=0.179 Sum_probs=33.9
Q ss_pred ccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHH
Q 025630 99 VDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYA 149 (250)
Q Consensus 99 VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~a 149 (250)
|.|+||||| |. ..+..|+.|+... . + .|+|.|||+++-|.+-
T Consensus 2 isvii~~~N---e~-~~l~~~l~sl~~~--~-~--eiivvD~gStD~t~~i 43 (229)
T cd02511 2 LSVVIITKN---EE-RNIERCLESVKWA--V-D--EIIVVDSGSTDRTVEI 43 (229)
T ss_pred EEEEEEeCC---cH-HHHHHHHHHHhcc--c-C--EEEEEeCCCCccHHHH
Confidence 679999999 87 4689999998755 1 2 6999999999877653
No 63
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=92.74 E-value=6.2 Score=40.36 Aligned_cols=135 Identities=19% Similarity=0.160 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc-cCCCCCCchHHHHHHHHHHHHHH----HHH-HHHHhhhhceecCCc--Ccccchhhc
Q 025630 20 IRRLFAASIFVGIGFIVVYRLS-HRPRNGEDGRWAWIGLLGAELWF----SLY-WVLTQALRWNCVYRR--TFKDRLSQR 91 (250)
Q Consensus 20 ~~R~~~~~~l~~l~~yl~wR~~-tlp~~~~~~~~~w~~l~~aEl~~----~~~-~~l~~~~~~~P~~R~--~~~d~L~~~ 91 (250)
+.|.+.+...++....-.|-.. .+|..+....=..++.+++=+.. +|. -+.+.+....--+|. +.++ .
T Consensus 63 lRR~~L~~~tla~tv~at~~m~~vl~~gG~~~le~~iL~Lfa~lFcwvs~~F~tAl~GF~~L~~~~~r~~~~~p~----~ 138 (736)
T COG2943 63 LRRYILLGLTLAQTVVATWYMKTVLPYGGPYMLEAGILVLFAVLFCWVSAGFWTALMGFLVLLFGRDRYLSIAPN----E 138 (736)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecCCCcCCCCCC----C
Confidence 5777766666666655555555 56766543332333222222211 111 112222222111111 1111 0
Q ss_pred ccCCCCcccEEEeCCCCCCCChHHHH----HHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHHHHHhHhHHHhc
Q 025630 92 YENDLPGVDIFVCTADPKTEQPIMVI----NTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKF 167 (250)
Q Consensus 92 ~~~~lP~VDVFI~Tynp~~EP~~vv~----~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~Fa~~wvpfC~k~ 167 (250)
.-..+-+--|.+|||| |.+.-|- -|..|..+ -=-.+++-+||+-|.+.+.- +++|...|++ +|++.
T Consensus 139 p~p~~hrTAilmPiyn---Ed~~rVfAgLrA~~eSla~-Tg~~~~FD~FVLSDs~dpdi--alAEq~a~~~----l~~e~ 208 (736)
T COG2943 139 PLPDLHRTAILMPIYN---EDVNRVFAGLRATYESLAA-TGHAEHFDFFVLSDSRDPDI--ALAEQKAWAE----LCREL 208 (736)
T ss_pred CCCcccceeEEeeccc---cCHHHHHHHHHHHHHHHHh-hCCcccceEEEEcCCCCchh--hhhHHHHHHH----HHHHh
Confidence 0112334679999999 9986553 33333333 23347899999999887643 4555544443 77766
Q ss_pred C
Q 025630 168 Y 168 (250)
Q Consensus 168 ~ 168 (250)
+
T Consensus 209 ~ 209 (736)
T COG2943 209 G 209 (736)
T ss_pred C
Confidence 6
No 64
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=89.97 E-value=0.47 Score=40.26 Aligned_cols=37 Identities=11% Similarity=0.039 Sum_probs=30.3
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchh
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDI 145 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~ 145 (250)
+.||||| |....+.+|+.|+++- ...|.|.|||.++-
T Consensus 1 ~vI~~yn---~~~~~l~~~l~sl~~q-----~~~iivvDn~s~~~ 37 (237)
T cd02526 1 AVVVTYN---PDLSKLKELLAALAEQ-----VDKVVVVDNSSGND 37 (237)
T ss_pred CEEEEec---CCHHHHHHHHHHHhcc-----CCEEEEEeCCCCcc
Confidence 4699999 9989999999999986 24588888876653
No 65
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=89.91 E-value=0.62 Score=44.29 Aligned_cols=43 Identities=19% Similarity=0.344 Sum_probs=35.9
Q ss_pred cEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhh
Q 025630 100 DIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDIT 146 (250)
Q Consensus 100 DVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t 146 (250)
=|.|.||| - |+.+.+|+-|++...+-.++..+||++||++..+
T Consensus 3 PVlv~ayN---R-p~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~ 45 (334)
T cd02514 3 PVLVIACN---R-PDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEV 45 (334)
T ss_pred CEEEEecC---C-HHHHHHHHHHHHhccccCCCceEEEEeCCCchHH
Confidence 47899999 5 5899999999999875557889999999998643
No 66
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=85.83 E-value=1.6 Score=39.78 Aligned_cols=51 Identities=22% Similarity=0.373 Sum_probs=43.7
Q ss_pred CcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHH
Q 025630 97 PGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEA 153 (250)
Q Consensus 97 P~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~ea 153 (250)
|.+=+.|.||| +.+.+.+++.+..+..||.+. +.+.|+|.++.+.+.+.+.
T Consensus 3 ~~i~~iiv~yn----~~~~l~~~l~~l~~~~~~~~~--iv~vDn~s~d~~~~~~~~~ 53 (305)
T COG1216 3 PKISIIIVTYN----RGEDLVECLASLAAQTYPDDV--IVVVDNGSTDGSLEALKAR 53 (305)
T ss_pred cceEEEEEecC----CHHHHHHHHHHHhcCCCCCcE--EEEccCCCCCCCHHHHHhh
Confidence 66888999999 668899999999999999654 4489999999998887775
No 67
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=84.15 E-value=16 Score=34.56 Aligned_cols=59 Identities=17% Similarity=0.210 Sum_probs=38.7
Q ss_pred cccEEEeCCCCCCCCh---HHHHHHHHHHhcCCCCC---CCcEEEEcCCCCchhhHHHHHHHHHHHHHhHhHHHhcCcc
Q 025630 98 GVDIFVCTADPKTEQP---IMVINTVLSVMAYDYPT---EKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVE 170 (250)
Q Consensus 98 ~VDVFI~Tynp~~EP~---~vv~~TVls~lalDYP~---~kl~VYv~DDG~s~~t~~al~eaa~Fa~~wvpfC~k~~V~ 170 (250)
..-|.||.|| ||- .++..|+...- =.|-. =.-.|.|+|||+.+.|.+...+ ||+|+|.+
T Consensus 68 ~lsVIVpayn---E~~ri~~mldeav~~le-~ry~~~~~F~~eiiVvddgs~d~T~~~a~k----------~s~K~~~d 132 (323)
T KOG2977|consen 68 YLSVIVPAYN---EEGRIGAMLDEAVDYLE-KRYLSDKSFTYEIIVVDDGSTDSTVEVALK----------FSRKLGDD 132 (323)
T ss_pred eeEEEEecCC---cccchHHHHHHHHHHHH-HHhccCCCCceeEEEeCCCCchhHHHHHHH----------HHHHcCcc
Confidence 5789999999 874 34445554432 22322 2567999999999888765433 66777743
No 68
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=82.16 E-value=2.3 Score=42.94 Aligned_cols=44 Identities=25% Similarity=0.095 Sum_probs=37.5
Q ss_pred cCCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCC-CcEEEEcC
Q 025630 93 ENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTE-KLSVYLSD 139 (250)
Q Consensus 93 ~~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~-kl~VYv~D 139 (250)
+..++.+=.+||+|| |..+-+.+|+-|+...|||.+ |+=+.|||
T Consensus 21 ~~~~~~~i~~v~cy~---E~~~~l~~tldsl~~~~y~~~~k~~~vi~D 65 (527)
T PF03142_consen 21 EFPDKFVICLVPCYS---EGEEELRTTLDSLATTDYDDSRKLIFVICD 65 (527)
T ss_pred CCCCceEEEEEcccc---CChHHHHHHHHHHHhcCCCCcccEEEEEcC
Confidence 345677888999999 999999999999999999995 66666666
No 69
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=70.38 E-value=5 Score=39.71 Aligned_cols=52 Identities=23% Similarity=0.267 Sum_probs=43.3
Q ss_pred cCCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhH
Q 025630 93 ENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITF 147 (250)
Q Consensus 93 ~~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~ 147 (250)
..++|.-.|.|+-.| |-...+.+||.|++.-.=+.=-..+.+.||++.+.+.
T Consensus 120 ~~dlp~TsviITfHN---EARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dped 171 (559)
T KOG3738|consen 120 KVDLPPTSVIITFHN---EARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPED 171 (559)
T ss_pred ecCCCCceEEEEecc---HHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChHH
Confidence 457999999999999 9999999999999986544334578999999987543
No 70
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=64.88 E-value=6.1 Score=35.51 Aligned_cols=48 Identities=23% Similarity=0.155 Sum_probs=30.6
Q ss_pred ccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHH
Q 025630 99 VDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYA 149 (250)
Q Consensus 99 VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~a 149 (250)
-.|.+|||| |-+.+-.-|=+=+-.++=-..+..+.+.||++-+=|.+.
T Consensus 5 YsvilPtYn---Ek~Nlpi~~~li~~~~~e~~~~~eiIivDD~SpDGt~~~ 52 (238)
T KOG2978|consen 5 YSVILPTYN---EKENLPIITRLIAKYMSEEGKKYEIIIVDDASPDGTQEV 52 (238)
T ss_pred eeEEecccc---CCCCCeeeHHHHHhhhhhhcCceEEEEEeCCCCCccHHH
Confidence 468999999 766554333333333322234677999999988766653
No 71
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=55.84 E-value=16 Score=32.30 Aligned_cols=32 Identities=13% Similarity=0.029 Sum_probs=25.2
Q ss_pred CCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCch
Q 025630 105 TADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHD 144 (250)
Q Consensus 105 Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~ 144 (250)
||| .+.+.+.+++.|++... ..|+|.|||+++
T Consensus 2 tyn---~~~~~l~~~l~sl~~q~-----~~iiVVDN~S~~ 33 (281)
T TIGR01556 2 TFN---PDLEHLGELITSLPKQV-----DRIIAVDNSPHS 33 (281)
T ss_pred ccC---ccHHHHHHHHHHHHhcC-----CEEEEEECcCCC
Confidence 899 44678899998888753 369999999753
No 72
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=53.01 E-value=15 Score=36.44 Aligned_cols=48 Identities=23% Similarity=0.419 Sum_probs=29.9
Q ss_pred CCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCC-CCcEEEEcCCCCchhh
Q 025630 94 NDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPT-EKLSVYLSDDAAHDIT 146 (250)
Q Consensus 94 ~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~-~kl~VYv~DDG~s~~t 146 (250)
...|.+-|.|=+|| -| ..+.+|+-+++... |. ++..|+||.||+...+
T Consensus 90 ~~~~~~pVlV~AcN---Rp-~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~~~ 138 (434)
T PF03071_consen 90 NKEPVIPVLVFACN---RP-DYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDEEV 138 (434)
T ss_dssp -------EEEEESS----T-T-HHHHHHHHHHH--S-TTTS-EEEEE-TT-HHH
T ss_pred cCCCcceEEEEecC---Cc-HHHHHHHHHHHHcC-CCCCCccEEEEecCCcHHH
Confidence 45788889999999 55 77999999999988 65 7899999999987544
No 73
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=49.30 E-value=43 Score=30.17 Aligned_cols=44 Identities=14% Similarity=0.250 Sum_probs=25.4
Q ss_pred EEEeCCCCCCCChHHHHHH---HHHHhcCCCCCCCcEEEEcCCCCchhh
Q 025630 101 IFVCTADPKTEQPIMVINT---VLSVMAYDYPTEKLSVYLSDDAAHDIT 146 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~T---Vls~lalDYP~~kl~VYv~DDG~s~~t 146 (250)
|.||.++-.. .+.++.+- +.++... =+...+.|.|.|||++..+
T Consensus 2 iIIPv~~~~~-~~~i~~~l~~~l~~l~~~-~~~~~~eiIvvd~~s~~~~ 48 (281)
T PF10111_consen 2 IIIPVRNRSE-RPDILERLRNCLESLSQF-QSDPDFEIIVVDDGSSDEF 48 (281)
T ss_pred EEEEecCCcc-chHHHHHHHHHHHHHHhc-CCCCCEEEEEEECCCchhH
Confidence 6899998222 22333222 3333321 1236899999999998544
No 74
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=49.10 E-value=21 Score=35.54 Aligned_cols=50 Identities=22% Similarity=0.272 Sum_probs=38.9
Q ss_pred ccCCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCch
Q 025630 92 YENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHD 144 (250)
Q Consensus 92 ~~~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~ 144 (250)
+.++||++.|.|--.| |--..+++||-|++--.=|.=--.|.+.||=+..
T Consensus 150 Ype~Lpt~SVviVFHN---EGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdK 199 (603)
T KOG3737|consen 150 YPENLPTSSVVIVFHN---EGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDK 199 (603)
T ss_pred CcccCCcceEEEEEec---CccHHHHHHHHHHHhcCcHHhhheEEEeccCCcc
Confidence 4678999999999999 9999999999999875544323346666775544
No 75
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=48.58 E-value=75 Score=26.87 Aligned_cols=75 Identities=20% Similarity=0.303 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHHHHHhHhHHHhcCccccCCcccccCCCCCCcccchhHH
Q 025630 114 IMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGF 193 (250)
Q Consensus 114 ~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~Fa~~wvpfC~k~~V~~r~P~~yF~~~~~~~~~~~~~e~ 193 (250)
..+..|++..++..|-++.+.+|++|=+++. |.+|..--.+.. -. +. ....+=.
T Consensus 52 S~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~---------------l~~~~~~~~~~~---~~-~~-------~~~~~~~ 105 (205)
T PF01580_consen 52 STLLRTLLLSLALTYSPDDVQLYIIDPKGSD---------------LAPLADLPHVAA---VA-VA-------TDPEEIL 105 (205)
T ss_dssp HHHHHHHHHHHHTT--TTTEEEEEE-TTSSC---------------CGGGTT-TTBSS----S--B--------SHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCccEEEEEcCCccc---------------cchhhhhhhhcc---cc-cc-------ccHHHHH
Confidence 5667788888888888899999999987652 222322111111 00 00 0112234
Q ss_pred HHHHHHHHHHHHHHHHHHhcC
Q 025630 194 LAIKKLYEDMENGIITAAKLG 214 (250)
Q Consensus 194 ~~~k~~Ye~~k~ri~~~~~~g 214 (250)
+.++..+++|+.|.+-..+.|
T Consensus 106 ~~l~~l~~em~~R~~~l~~~~ 126 (205)
T PF01580_consen 106 RLLEELVEEMERRQALLREAG 126 (205)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 577889999999997665544
No 76
>KOG3177 consensus Oligoketide cyclase/lipid transport protein [Lipid transport and metabolism]
Probab=47.41 E-value=12 Score=33.85 Aligned_cols=40 Identities=23% Similarity=0.506 Sum_probs=29.0
Q ss_pred CCchhhHHH-HHHHHHHHHHhHhHHHhcCccccCCcccccCC
Q 025630 141 AAHDITFYA-LIEASHFAEHWIPYCKKFYVEPRSPGAYFQSI 181 (250)
Q Consensus 141 G~s~~t~~a-l~eaa~Fa~~wvpfC~k~~V~~r~P~~yF~~~ 181 (250)
|.++.+.++ ..+.++. +.+||+|+|-.|..+-|...|-++
T Consensus 77 gysp~~my~vVS~V~~Y-~~FVPwC~kS~V~~~~P~~~~kA~ 117 (227)
T KOG3177|consen 77 GYSPSEMYSVVSNVSEY-HEFVPWCKKSDVTSRRPSGPLKAD 117 (227)
T ss_pred CCCHHHHHHHHHhHHHh-hccccceeccceeecCCCCCceee
Confidence 556666665 4455554 459999999999999997666543
No 77
>PF15632 ATPgrasp_Ter: ATP-grasp in the biosynthetic pathway with Ter operon
Probab=42.55 E-value=51 Score=31.40 Aligned_cols=55 Identities=15% Similarity=0.232 Sum_probs=30.2
Q ss_pred cccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHHHHHhHhHHHhcCc
Q 025630 98 GVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYV 169 (250)
Q Consensus 98 ~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~Fa~~wvpfC~k~~V 169 (250)
.||||+|.++ .-. ++.-.=++-+.-+++-++. +..|+.-+..=.+|.+ +|+++||
T Consensus 66 ~Idv~~P~~~---~~~-------l~~~r~~F~a~Gv~l~~~~---~~~~l~~~~dK~~~y~----~~~~~~i 120 (329)
T PF15632_consen 66 GIDVFVPGRN---REL-------LAAHRDEFEALGVKLLTAS---SAETLELADDKAAFYE----FMEANGI 120 (329)
T ss_pred CCeEEEcCcc---HHH-------HHHHHHHHHHhCCEEEecC---CHHHHHHHhhHHHHHH----HHHhCCC
Confidence 4999999999 222 3322222333345565533 3334443333344555 8899998
No 78
>COG3151 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=40.20 E-value=33 Score=28.98 Aligned_cols=59 Identities=25% Similarity=0.379 Sum_probs=35.7
Q ss_pred CCCcccEEEeCCCCCCCChHHHHHHHHHH-------hcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHHHHHhHhHHHhc
Q 025630 95 DLPGVDIFVCTADPKTEQPIMVINTVLSV-------MAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKF 167 (250)
Q Consensus 95 ~lP~VDVFI~Tynp~~EP~~vv~~TVls~-------lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~Fa~~wvpfC~k~ 167 (250)
.||.--..|--|- +...--|-|+ -.+|||..|++ .-| .-..-..|-.+|+-||-++
T Consensus 75 ~~p~Psm~VRlYh------DA~~aEv~~s~q~rR~qa~y~ypn~~~h--q~d---------ek~q~N~FLgdWL~ycla~ 137 (147)
T COG3151 75 YWPLPSMTVRLYH------DAMVAEVCSSQQIRRFQARYDYPNKKLH--QRD---------EKHQINQFLGDWLRYCLAH 137 (147)
T ss_pred CCCCCceEeeeeh------hhHHHHHHHHHHHhhHHhhcCCCCcccc--Ccc---------HHHHHHHHHHHHHHHHHHc
Confidence 4555556666665 2222223333 24799977743 222 2344567988999999999
Q ss_pred Ccc
Q 025630 168 YVE 170 (250)
Q Consensus 168 ~V~ 170 (250)
|..
T Consensus 138 G~~ 140 (147)
T COG3151 138 GHM 140 (147)
T ss_pred CCc
Confidence 965
No 79
>PRK09121 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=39.63 E-value=88 Score=29.57 Aligned_cols=53 Identities=17% Similarity=0.248 Sum_probs=40.2
Q ss_pred EeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCch--------hhHHHHHHHHHHHH
Q 025630 103 VCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHD--------ITFYALIEASHFAE 158 (250)
Q Consensus 103 I~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~--------~t~~al~eaa~Fa~ 158 (250)
|.+-+|..|.++.+++-|..+..+= |.++ ++|+-|-|-. .++.+|.++++.++
T Consensus 275 vd~k~~~lE~~e~I~~rI~~a~~~v-~~~~--l~lspdCGf~~l~~~~a~~KL~~l~~~a~~~~ 335 (339)
T PRK09121 275 IDVASDTIETPEEVADTLRKALQFV-DADK--LYPCTNCGMAPLSRDVARGKLNALSAGAEIVR 335 (339)
T ss_pred EeCCCCCCCCHHHHHHHHHHHHHhC-CHHH--EEECCCCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999877653 5566 9999998854 24446777665543
No 80
>PF02012 BNR: BNR/Asp-box repeat; InterPro: IPR002860 Members of this entry contain multiple BNR (bacterial neuraminidase repeat) repeats or Asp-boxes. The repeats are short, however the repeats are never found closer than 40 residues together suggesting that the repeat is structurally longer. These repeats are found in a variety of non-homologous proteins, including bacterial ribonucleases, sulphite oxidases, reelin, netrins, sialidases, neuraminidases, some lipoprotein receptors, and a variety of glycosyl hydrolases [].; PDB: 2JKB_A 2VW0_A 2VW2_A 2VW1_A 2CN2_D 2CN3_B 2VK7_B 2VK5_A 2VK6_A 2BF6_A ....
Probab=39.07 E-value=18 Score=18.31 Aligned_cols=8 Identities=38% Similarity=0.679 Sum_probs=6.6
Q ss_pred EEcCCCCc
Q 025630 136 YLSDDAAH 143 (250)
Q Consensus 136 Yv~DDG~s 143 (250)
|.|+|||.
T Consensus 1 ~~S~D~G~ 8 (12)
T PF02012_consen 1 YYSTDGGK 8 (12)
T ss_dssp EEESSTTS
T ss_pred CEeCCCcc
Confidence 67899985
No 81
>PRK05256 condesin subunit E; Provisional
Probab=36.88 E-value=32 Score=31.38 Aligned_cols=28 Identities=25% Similarity=0.534 Sum_probs=22.6
Q ss_pred HHHHhHhHHHhcCcc-ccCCcccccCCCC
Q 025630 156 FAEHWIPYCKKFYVE-PRSPGAYFQSISE 183 (250)
Q Consensus 156 Fa~~wvpfC~k~~V~-~r~P~~yF~~~~~ 183 (250)
|...+-.|-+|++++ .||||.||=.-|.
T Consensus 50 ~q~~L~~FY~ry~~eLi~aPEgffYLrP~ 78 (238)
T PRK05256 50 FQEELEEFYRRYNVELIRAPEGFFYLRPR 78 (238)
T ss_pred HHHHHHHHHHHhceeEEEcCCceEEeccc
Confidence 555777899999999 9999998865443
No 82
>COG3095 MukE Uncharacterized protein involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=35.08 E-value=29 Score=30.87 Aligned_cols=28 Identities=25% Similarity=0.466 Sum_probs=22.5
Q ss_pred HHHHHhHhHHHhcCcc-ccCCcccccCCC
Q 025630 155 HFAEHWIPYCKKFYVE-PRSPGAYFQSIS 182 (250)
Q Consensus 155 ~Fa~~wvpfC~k~~V~-~r~P~~yF~~~~ 182 (250)
.|...+--|-++++|+ .|+||.||---+
T Consensus 47 dfq~~l~~fy~rynvelirapegffylrp 75 (238)
T COG3095 47 DFQEYLEEFYARYNVELIRAPEGFFYLRP 75 (238)
T ss_pred hhHHHHHHHHHHhhhhheecCCceeEecc
Confidence 4666666799999999 999999986544
No 83
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=34.85 E-value=21 Score=36.62 Aligned_cols=51 Identities=22% Similarity=0.234 Sum_probs=42.1
Q ss_pred cCCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhh
Q 025630 93 ENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDIT 146 (250)
Q Consensus 93 ~~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t 146 (250)
.+.+|++-|.||-+| |...++.+||-|....-=|.---.+.|.||+.....
T Consensus 138 ~~~Lp~~Svii~f~n---E~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~ 188 (578)
T KOG3736|consen 138 SDKLPTTSVIIIFHN---EAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDH 188 (578)
T ss_pred ccccCCCceEEEEec---CCCcchhheEEeehccCChhHeEEEEEeecCcchhh
Confidence 456999999999999 999999999999887665544567888999877544
No 84
>PF06039 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in Escherichia coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase []. ; GO: 0008924 malate dehydrogenase (quinone) activity, 0006099 tricarboxylic acid cycle, 0055114 oxidation-reduction process
Probab=33.67 E-value=1.2e+02 Score=30.56 Aligned_cols=76 Identities=17% Similarity=0.264 Sum_probs=52.5
Q ss_pred HhcCCCCCCCcEEEEcCCCCchhhHH-HHHHHHHHHHHhHhHHHhcCccccCCcccccCCCCCCcccchhHHHHHHHHHH
Q 025630 123 VMAYDYPTEKLSVYLSDDAAHDITFY-ALIEASHFAEHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFLAIKKLYE 201 (250)
Q Consensus 123 ~lalDYP~~kl~VYv~DDG~s~~t~~-al~eaa~Fa~~wvpfC~k~~V~~r~P~~yF~~~~~~~~~~~~~e~~~~k~~Ye 201 (250)
.+-++|-+++ .||.-+++-. .+.|..+-.++|--.+-+.|+ -..|+.|-++.+.-.-.-..+|.+++|+.||
T Consensus 58 ~cElNYTpe~------~dGsidi~KA~~IneqFevsrqfWs~lv~~g~-l~~p~~FI~~~PHmsfv~Ge~~v~fLkkR~~ 130 (488)
T PF06039_consen 58 LCELNYTPEK------ADGSIDISKAVKINEQFEVSRQFWSYLVENGI-LQNPESFINPVPHMSFVWGEENVDFLKKRYE 130 (488)
T ss_pred hhhccCCCCc------CCCcccHHHHHHHHHHHHHHHHHHHHHHHCCC-CCChHHhccCCCceEEEEChHhHHHHHHHHH
Confidence 5678998887 6887766544 345544446666677777774 3478888877765332223678999999999
Q ss_pred HHHH
Q 025630 202 DMEN 205 (250)
Q Consensus 202 ~~k~ 205 (250)
.||.
T Consensus 131 ~l~~ 134 (488)
T PF06039_consen 131 ALKE 134 (488)
T ss_pred HHhc
Confidence 9985
No 85
>PF06853 DUF1249: Protein of unknown function (DUF1249); InterPro: IPR009659 This family consists of several hypothetical bacterial proteins of around 150 residues in length. The function of this family is unknown.
Probab=31.99 E-value=39 Score=27.54 Aligned_cols=22 Identities=18% Similarity=0.522 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhHhHHHhcCcc
Q 025630 149 ALIEASHFAEHWIPYCKKFYVE 170 (250)
Q Consensus 149 al~eaa~Fa~~wvpfC~k~~V~ 170 (250)
.-.+...|-..|+-||-++|-.
T Consensus 96 eK~q~N~FL~eWL~~CL~~G~~ 117 (120)
T PF06853_consen 96 EKWQLNRFLAEWLRYCLRHGHS 117 (120)
T ss_pred HHHHHHHHHHHHHHHHHHcCCc
Confidence 3456788988999999999954
No 86
>PF08861 DUF1828: Domain of unknown function DUF1828; InterPro: IPR014960 These proteins are functionally uncharacterised.
Probab=31.63 E-value=36 Score=25.80 Aligned_cols=40 Identities=18% Similarity=0.129 Sum_probs=27.4
Q ss_pred EEEEcCCCCchhhHHH----HHHHHHHHHHhHhHHHhcCccccC
Q 025630 134 SVYLSDDAAHDITFYA----LIEASHFAEHWIPYCKKFYVEPRS 173 (250)
Q Consensus 134 ~VYv~DDG~s~~t~~a----l~eaa~Fa~~wvpfC~k~~V~~r~ 173 (250)
++.|+|||.+...+.. +....+..+.+.-.+.++||+-..
T Consensus 21 ~~~ltDdG~Tl~~L~~~G~~~~~s~~R~~~l~~il~~~gv~~~~ 64 (90)
T PF08861_consen 21 SIRLTDDGYTLMNLSSSGIDIDRSKKRKKILNSILNGFGVELDE 64 (90)
T ss_pred eEEEecCHHHHHhHhHcCCccccchHHHHHHHHHHHHcCccccC
Confidence 3789999998766663 221234445666789999988655
No 87
>PF01717 Meth_synt_2: Cobalamin-independent synthase, Catalytic domain; InterPro: IPR002629 This is a domain of vitamin-B12 independent methionine synthases or 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferases, 2.1.1.14 from EC from bacteria and plants. Plants are the only higher eukaryotes that have the required enzymes for methionine synthesis []. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to homocysteine []. The aligned region makes up the carboxy region of the approximately 750 amino acid protein except in some hypothetical archaeal proteins present in the family, where this region corresponds to the entire length.; GO: 0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, 0009086 methionine biosynthetic process; PDB: 1U22_A 1U1H_A 1U1U_A 1U1J_A 3BQ5_A 3BQ6_A 1XDJ_B 1XR2_B 1T7L_B 1XPG_B ....
Probab=30.91 E-value=91 Score=28.74 Aligned_cols=39 Identities=31% Similarity=0.523 Sum_probs=30.3
Q ss_pred EeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCch
Q 025630 103 VCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHD 144 (250)
Q Consensus 103 I~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~ 144 (250)
|+|-+|..|.++.+...|..++.+ -|.++ ++|+.|=|-.
T Consensus 266 v~~~~~~vE~~e~v~~ri~~a~~~-~~~~~--l~~sPdCGfa 304 (324)
T PF01717_consen 266 VDTKSPEVESPEEVADRIEEALEY-VPLEQ--LWLSPDCGFA 304 (324)
T ss_dssp S-TTSSS--THHHHHHHHHHHHTT-S-GGG--EEEEESSTST
T ss_pred EcCCCCCcCCHHHHHHHHHHHHhc-Ccccc--EEEcCCCCCC
Confidence 899999999999999999999988 56566 7999997754
No 88
>PF09623 Cas_NE0113: CRISPR-associated protein NE0113 (Cas_NE0113); InterPro: IPR019092 Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) are a family of DNA direct repeats separated by regularly sized non-repetitive spacer sequences that are found in most bacterial and archaeal genomes []. CRISPRs appear to provide acquired resistance against bacteriophages, possibly acting with an RNA interference-like mechanism to inhibit gene functions of invasive DNA elements [, ]. Differences in the number and type of spacers between CRISPR repeats correlate with phage sensitivity. It is thought that following phage infection, bacteria integrate new spacers derived from phage genomic sequences, and that the removal or addition of particular spacers modifies the phage-resistance phenotype of the cell. Therefore, the specificity of CRISPRs may be determined by spacer-phage sequence similarity. In addition, there are many protein families known as CRISPR-associated sequences (Cas), which are encoded in the vicinity of CRISPR loci []. CRISPR/cas gene regions can be quite large, with up to 20 different, tandem-arranged cas genes next to a CRISPR cluster or filling the region between two repeat clusters. Cas genes and CRISPRs are found on mobile genetic elements such as plasmids, and have undergone extensive horizontal transfer. Cas proteins are thought to be involved in the propagation and functioning of CRISPRs. Some Cas proteins show similarity to helicases and repair proteins, although the functions of most are unknown. Cas families can be divided into subtypes according to operon organisation and phylogeny. This entry represents a Cas protein family found in both bacteria and arachaea. The function of these proteins is unknown.
Probab=30.77 E-value=4e+02 Score=24.02 Aligned_cols=61 Identities=18% Similarity=0.319 Sum_probs=46.5
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHHHHHhHhHHHhcCcc
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVE 170 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~Fa~~wvpfC~k~~V~ 170 (250)
|+|||-. ..|.|+-.|+-+..+-.++.+.+.|.=..||...+...-+ ...+.-||+.++..
T Consensus 4 iLlatlG---~sPqVVTETL~aL~~~g~~p~EV~vitT~~~~~~~~~~ll------~g~~~~l~~~y~~~ 64 (224)
T PF09623_consen 4 ILLATLG---TSPQVVTETLYALAQQGEIPDEVHVITTRDGAVRAALRLL------DGGLQRLCQDYYLP 64 (224)
T ss_pred EEEEecC---CCchHHHHHHHHHHcCCCCCCEEEEEECCChHHHHHHHHH------HHHHHHHHHhhcCC
Confidence 7899999 8889999999999999999899888777777654433333 11245699999754
No 89
>COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms]
Probab=29.54 E-value=16 Score=37.89 Aligned_cols=38 Identities=21% Similarity=0.320 Sum_probs=33.8
Q ss_pred EeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCc
Q 025630 103 VCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAH 143 (250)
Q Consensus 103 I~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s 143 (250)
..++. |+.++|.+.+-++.-+|||.+||.=.|+.||..
T Consensus 323 ~~~~p---e~aIlVarel~aa~L~e~Pr~rL~GvVl~dGaa 360 (756)
T COG3605 323 ANAWP---EDAILVARELGAAELLEYPRDRLRGVVLEDGAA 360 (756)
T ss_pred hhcCC---cceEEEecccCHHHHhhCchhhheeeeeecCcc
Confidence 45666 888899999999999999999999999999985
No 90
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=29.01 E-value=1e+02 Score=26.68 Aligned_cols=43 Identities=23% Similarity=0.297 Sum_probs=32.8
Q ss_pred CCCCCCChHHHHHHHHHHhc-----------CCCCC---CCcEEEEcCCCCchhhHHHHH
Q 025630 106 ADPKTEQPIMVINTVLSVMA-----------YDYPT---EKLSVYLSDDAAHDITFYALI 151 (250)
Q Consensus 106 ynp~~EP~~vv~~TVls~la-----------lDYP~---~kl~VYv~DDG~s~~t~~al~ 151 (250)
|| |+...+.+|+.|++. -.|.. .|+-|-|.=||...+.-..+.
T Consensus 2 YN---Ed~~ll~rTL~gv~~Ni~~l~~r~~s~~wG~d~WkkiVVcIv~DGr~ki~~~tl~ 58 (163)
T PF01644_consen 2 YN---EDEILLARTLHGVMKNIAHLCSRKRSKTWGKDAWKKIVVCIVSDGRAKINPRTLD 58 (163)
T ss_pred CC---CCHHHHHHHHHHHHHHHHHHHhCCcCCcCCCCCCcEEEEEEEecCcccCCHHHHH
Confidence 89 999999999999764 22322 389999999999887555443
No 91
>PF11720 Inhibitor_I78: Peptidase inhibitor I78 family; InterPro: IPR021719 This family includes Aspergillus elastase inhibitor and belongs to MEROPS peptidase inhibitor family I78.
Probab=27.59 E-value=39 Score=24.01 Aligned_cols=20 Identities=30% Similarity=0.619 Sum_probs=17.3
Q ss_pred HhcCCCCCCCcEEEEcCCCC
Q 025630 123 VMAYDYPTEKLSVYLSDDAA 142 (250)
Q Consensus 123 ~lalDYP~~kl~VYv~DDG~ 142 (250)
++-|||=+++|+|.|=|||.
T Consensus 34 ~vTmDyr~dRLnv~~D~~g~ 53 (60)
T PF11720_consen 34 AVTMDYRPDRLNVEVDDDGV 53 (60)
T ss_pred cCcccCCCCcEEEEECCCCc
Confidence 67899999999999988763
No 92
>COG4226 HicB Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=27.40 E-value=44 Score=27.22 Aligned_cols=42 Identities=17% Similarity=0.249 Sum_probs=26.0
Q ss_pred EEEcCCCCchhhHH--HHHHHHHH-HHHhHhHHHhcCccccCCcc
Q 025630 135 VYLSDDAAHDITFY--ALIEASHF-AEHWIPYCKKFYVEPRSPGA 176 (250)
Q Consensus 135 VYv~DDG~s~~t~~--al~eaa~F-a~~wvpfC~k~~V~~r~P~~ 176 (250)
+..+-||.+...=. .+..+-.- -+..+.+|++-|++||.|.+
T Consensus 26 ~~g~~~~~~f~~~sv~~lk~~~~~s~~~yle~C~~~g~EP~k~~S 70 (111)
T COG4226 26 FVGLSGVIDFQGDSVKGLKKEGELSLDDYLEFCKERGIEPRKPYS 70 (111)
T ss_pred ccccccccCchhhhHHHHHHHHHhhHHHHHHHHHHcCCCCccccC
Confidence 44566676643222 23222222 24678899999999999975
No 93
>PF04580 Pox_D3: Chordopoxvirinae D3 protein ; InterPro: IPR007660 This is a family of Chordopoxvirinae D3 protein. The conserved region occupies the entire length of D3 protein.
Probab=26.49 E-value=1.9e+02 Score=26.71 Aligned_cols=61 Identities=15% Similarity=0.293 Sum_probs=38.4
Q ss_pred CCCCCCCcEEEEcCCCCchhh----HHHHHHHHHHHHHhHhHHHhcCccccCCcccccCCCCCCcccchhHHHHHHHHHH
Q 025630 126 YDYPTEKLSVYLSDDAAHDIT----FYALIEASHFAEHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFLAIKKLYE 201 (250)
Q Consensus 126 lDYP~~kl~VYv~DDG~s~~t----~~al~eaa~Fa~~wvpfC~k~~V~~r~P~~yF~~~~~~~~~~~~~e~~~~k~~Ye 201 (250)
-.|..+|..|+|.=|....++ |+.--.-..|+..| |+.+.+ +...|=+++++.|+
T Consensus 182 s~~~~~k~~~iv~~~d~d~ikL~~~~y~r~~f~aFv~aW--f~~Ql~-------------------~~~~enekv~~~~~ 240 (246)
T PF04580_consen 182 SPFRIDKWTVIVKFNDYDNIKLITFCYDRNKFRAFVYAW--FNSQLS-------------------NNKEENEKVKKAFD 240 (246)
T ss_pred cccCcceEEEEeecCChhhHHHHHHhcCHHHHHHHHHHH--HHhhhc-------------------cCchhhHHHHHHHH
Confidence 346678999999933333332 22222333467777 665553 12457789999999
Q ss_pred HHHHHH
Q 025630 202 DMENGI 207 (250)
Q Consensus 202 ~~k~ri 207 (250)
+.+.+|
T Consensus 241 ~~~~~I 246 (246)
T PF04580_consen 241 EVRKLI 246 (246)
T ss_pred HHHhhC
Confidence 998875
No 94
>PF08844 DUF1815: Domain of unknown function (DUF1815); InterPro: IPR014943 This entry is about 100 amino acids in length and is functionally uncharacterised.
Probab=26.29 E-value=68 Score=25.66 Aligned_cols=16 Identities=25% Similarity=0.333 Sum_probs=12.8
Q ss_pred cCCCCCCCcEEEEcCCCCc
Q 025630 125 AYDYPTEKLSVYLSDDAAH 143 (250)
Q Consensus 125 alDYP~~kl~VYv~DDG~s 143 (250)
.-.|+ -+||.||||+.
T Consensus 28 ~rG~~---AsCYtC~dG~~ 43 (105)
T PF08844_consen 28 RRGYL---ASCYTCGDGRD 43 (105)
T ss_pred hCCce---eEEEecCCCCC
Confidence 34677 68999999985
No 95
>COG0579 Predicted dehydrogenase [General function prediction only]
Probab=26.10 E-value=31 Score=34.06 Aligned_cols=39 Identities=15% Similarity=0.173 Sum_probs=25.2
Q ss_pred HhHhHHHhcCcc-ccCCcccccCCCCCCcccchhHHHHHHHHHHHHHH
Q 025630 159 HWIPYCKKFYVE-PRSPGAYFQSISEPHEAEEAKGFLAIKKLYEDMEN 205 (250)
Q Consensus 159 ~wvpfC~k~~V~-~r~P~~yF~~~~~~~~~~~~~e~~~~k~~Ye~~k~ 205 (250)
.|-.|||+|++. -++|.-=|+.. .+|.+.|++.||.++.
T Consensus 74 ~~~~~~kq~~~~f~~~g~l~vA~~--------e~e~~~L~~l~~~~~~ 113 (429)
T COG0579 74 NEFAICKQLGIPFINCGKLSVATG--------EEEVERLEKLYERGKA 113 (429)
T ss_pred HHHHHHHHhCCcccccCeEEEEEC--------hHHHHHHHHHHHHHhh
Confidence 456799999966 33333222211 4678888888888874
No 96
>PF12344 UvrB: Ultra-violet resistance protein B; InterPro: IPR024759 This entry represents a domain found towards the C terminus of the ultraviolet resistance protein B (UvrB). UvrB conveys mutational resistance against UV light to various different species []. This domain is approximately 40 amino acids in length and contains two conserved sequence motifs: YAD and RRR.; PDB: 2D7D_A 2NMV_A 3UWX_B 1D2M_A 1C4O_A 2FDC_A 1D9Z_A 1T5L_B 1D9X_A.
Probab=24.79 E-value=1.3e+02 Score=20.53 Aligned_cols=28 Identities=25% Similarity=0.241 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHhHhHHHhcCccccCC
Q 025630 147 FYALIEASHFAEHWIPYCKKFYVEPRSP 174 (250)
Q Consensus 147 ~~al~eaa~Fa~~wvpfC~k~~V~~r~P 174 (250)
-.|+.|+.+.++.=..|=++|||.|++-
T Consensus 11 ~~ai~eT~rRR~~Q~~yN~~h~ItP~ti 38 (44)
T PF12344_consen 11 QKAIDETNRRREIQIAYNKEHGITPKTI 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT------
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCc
Confidence 3478898888877778999999998863
No 97
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=23.94 E-value=1.6e+02 Score=27.07 Aligned_cols=42 Identities=24% Similarity=0.252 Sum_probs=25.6
Q ss_pred EEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHH
Q 025630 102 FVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFY 148 (250)
Q Consensus 102 FI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~ 148 (250)
.|++.+.. ...++.|+.|++.- ....+++||.+||-+.....
T Consensus 5 iv~~~~~y---~~~~~~~i~Sil~n--~~~~~~fhii~d~~s~~~~~ 46 (280)
T cd06431 5 IVCAGYNA---SRDVVTLVKSVLFY--RRNPLHFHLITDEIARRILA 46 (280)
T ss_pred EEEccCCc---HHHHHHHHHHHHHc--CCCCEEEEEEECCcCHHHHH
Confidence 34555522 34456677777543 34568999999988764433
No 98
>KOG2447 consensus Oligosaccharyltransferase, delta subunit (ribophorin II) [Posttranslational modification, protein turnover, chaperones]
Probab=23.56 E-value=3.1e+02 Score=25.91 Aligned_cols=25 Identities=24% Similarity=0.453 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHH-HHhhhhc
Q 025630 52 WAWIGLLGAELWFSLYWV-LTQALRW 76 (250)
Q Consensus 52 ~~w~~l~~aEl~~~~~~~-l~~~~~~ 76 (250)
.+-.++.+.|..++.+|+ ++++...
T Consensus 237 ~Fh~gi~g~~vL~f~yWlqlsmFqtL 262 (287)
T KOG2447|consen 237 GFHAGIAGILVLFFVYWLQLSMFQTL 262 (287)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 344567788889999998 5655543
No 99
>TIGR02584 cas_NE0113 CRISPR-associated protein, NE0113 family. Members of this minor CRISPR-associated (Cas) protein family are found in cas gene clusters in Vibrio vulnificus YJ016, Nitrosomonas europaea ATCC 19718, Mannheimia succiniciproducens MBEL55E, and Verrucomicrobium spinosum.
Probab=23.49 E-value=1.5e+02 Score=26.74 Aligned_cols=70 Identities=20% Similarity=0.438 Sum_probs=47.2
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhcCCCC--CCCcEEEEcCCCCchhhHHHHH-HHHHHHHHhHhHHHhcCccccCC
Q 025630 101 IFVCTADPKTEQPIMVINTVLSVMAYDYP--TEKLSVYLSDDAAHDITFYALI-EASHFAEHWIPYCKKFYVEPRSP 174 (250)
Q Consensus 101 VFI~Tynp~~EP~~vv~~TVls~lalDYP--~~kl~VYv~DDG~s~~t~~al~-eaa~Fa~~wvpfC~k~~V~~r~P 174 (250)
|+|||-. -.|.||-.|+-+..+-.+| .+.+.|.=.-+|...+ ..+|. .-..-..+|.-||+++.-.++.+
T Consensus 1 ILvat~G---~sPQVVTETLyaL~~~g~~~~pdEi~vItT~~g~~~~-~~~Ll~~~~~~~g~~~~l~~dy~~~~~~~ 73 (209)
T TIGR02584 1 ILLCVSG---MSPQIITETIYALAQESPPVVPEEIHVITTSDGKRDI-QQQLLTPDEAWQGVLAKLRHDYFQGPRPP 73 (209)
T ss_pred CEEEecC---CCCchHHHHHHHHHhcCCCCCCCeEEEEEccCcHHHH-HHHhccCccchhhHHHHHHHHHhccCccc
Confidence 5788888 8889999999999998888 7888887777775432 33332 11101235667999994234443
No 100
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=23.45 E-value=63 Score=23.85 Aligned_cols=33 Identities=21% Similarity=0.180 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHH
Q 025630 114 IMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYAL 150 (250)
Q Consensus 114 ~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al 150 (250)
..+...+.--+++.+- + +||.|||+++-|..-+
T Consensus 5 ~~L~~wl~~~~~lG~d--~--i~i~d~~s~D~t~~~l 37 (97)
T PF13704_consen 5 DYLPEWLAHHLALGVD--H--IYIYDDGSTDGTREIL 37 (97)
T ss_pred HHHHHHHHHHHHcCCC--E--EEEEECCCCccHHHHH
Confidence 4566777776666653 3 8999999998775444
No 101
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=22.50 E-value=1.6e+02 Score=28.16 Aligned_cols=39 Identities=18% Similarity=0.220 Sum_probs=28.4
Q ss_pred EeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCch
Q 025630 103 VCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHD 144 (250)
Q Consensus 103 I~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~ 144 (250)
|.+.+|..|+++.+++-|..++.+= |.++ ++|+.|-|-.
T Consensus 302 vd~~~~~vE~~e~I~~rI~~a~~~v-~~~~--l~lspdCGf~ 340 (368)
T PRK06520 302 ITTKNGELENADDVKARLAEAAKFV-PLEQ--LCLSPQCGFA 340 (368)
T ss_pred EeCCCCCCCCHHHHHHHHHHHHHhC-CHHH--EeeCcccCCC
Confidence 7778888888888888887766543 4455 7888887744
No 102
>PF09373 PMBR: Pseudomurein-binding repeat; InterPro: IPR018975 Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) is a methanogenic Gram-positive microorganism with a cell wall consisting of pseudomurein. This repeat specifically binds to pseudomurein. This repeat is found at the N terminus of PeiW and PeiP which are pseudomurein binding phage proteins.
Probab=22.39 E-value=1.3e+02 Score=18.79 Aligned_cols=22 Identities=32% Similarity=0.478 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHH-hcCCCCh
Q 025630 197 KKLYEDMENGIITAA-KLGRIPE 218 (250)
Q Consensus 197 k~~Ye~~k~ri~~~~-~~g~vp~ 218 (250)
+.+|-+|-.|+.+-. +.|+.|+
T Consensus 7 ~~~~~d~a~rv~~f~~~ngRlPn 29 (33)
T PF09373_consen 7 KEEYLDMASRVNNFYESNGRLPN 29 (33)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCC
Confidence 468889999999876 4777774
No 103
>PF14829 GPAT_N: Glycerol-3-phosphate acyltransferase N-terminal; PDB: 1IUQ_A 1K30_A.
Probab=20.99 E-value=93 Score=23.80 Aligned_cols=20 Identities=25% Similarity=0.634 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHhcCCCChhh
Q 025630 201 EDMENGIITAAKLGRIPEEV 220 (250)
Q Consensus 201 e~~k~ri~~~~~~g~vp~~~ 220 (250)
|++...|..-+++|++|.+.
T Consensus 12 qells~IkkeveaGkLP~~v 31 (77)
T PF14829_consen 12 QELLSGIKKEVEAGKLPANV 31 (77)
T ss_dssp HHHHHHHHHHHHTTSS-HHH
T ss_pred HHHHHHHHHHHHcCCCChhH
Confidence 68889999999999999876
Done!