Your job contains 1 sequence.
>025634
MDRLRPRQRSVFTGFTKTELEKMEKLLMESKDDLLSKEFCQKIAKSFSCSAGRAGKPVVK
WTEVQSWFQSRQQDRPTKVTSSTNESKKGSDLPDACPPIKEHGSSQEPRGEKVPDVSEME
FEARSSKDGAWYDVDMFLAHRFLDCGEAEVRVRFVGFGADEDEWVNVKNAVRERSVPLEP
SDCHKLKVGGHVLCFQERRDQGIHYDAHIAEIHRRMHDIRGCRCLFLVRYNHDNTEERVR
LRRLCCRPTF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025634
(250 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1005716727 - symbol:SHH1 "AT1G15215" species:3... 480 1.0e-45 1
TAIR|locus:2095077 - symbol:SHH2 "SAWADEE homeodomain hom... 403 9.6e-44 2
>TAIR|locus:1005716727 [details] [associations]
symbol:SHH1 "AT1G15215" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP] [GO:0033562 "cotranscriptional gene silencing by
small RNA" evidence=IMP] EMBL:CP002684 EMBL:AC007591 GO:GO:0006306
GO:GO:0006346 UniGene:At.26582 UniGene:At.44195 IPI:IPI00520704
PIR:C86286 RefSeq:NP_849666.2 ProteinModelPortal:Q9XI47 SMR:Q9XI47
PRIDE:Q9XI47 DNASU:838088 EnsemblPlants:AT1G15215.2 GeneID:838088
KEGG:ath:AT1G15215 TAIR:At1g15215 HOGENOM:HOG000241854
InParanoid:Q9XI47 OMA:AVYCDAH PhylomeDB:Q9XI47
ProtClustDB:CLSN2690991 Genevestigator:Q9XI47 GO:GO:0033562
Uniprot:Q9XI47
Length = 258
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 98/215 (45%), Positives = 132/215 (61%)
Query: 32 DDLLSKEFCQKIAKSFSCSAGRAGKPVVKWTEVQSWFQSR--QQDRP-TKVTSS------ 82
D L K+FCQ +A +FSCS R GK + W +VQ WFQ + Q +P +K S
Sbjct: 31 DQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKHQSQPKSKTLPSPPLQIH 90
Query: 83 --TNESKKGSDLPDACPPIKEHGSSQEPRGEKVPDVSEMEFEARSSKDGAWYDVDMFLAH 140
+N S S+ +A + + + R K D++++ FEA+S++D AWYDV FL +
Sbjct: 91 DLSNPSSYASNASNAT--FVGNSTFVQTRKGKASDLADLAFEAKSARDYAWYDVSSFLTY 148
Query: 141 RFLDCGEAEVRVRFVGFGADEDEWVNVKNAVRERSVPLEPSDCHKLKVGGHVLCFQERRD 200
R L GE EVRVRF GF DEWVNVK +VRERS+P+EPS+C ++ VG +LCFQER D
Sbjct: 149 RVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLLLCFQERED 208
Query: 201 QGIHYDAHIAEIHRRMHDIRGCRCLFLVRYNHDNT 235
Q ++ D H+ I R +HD C C+FLVRY DNT
Sbjct: 209 QALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNT 243
>TAIR|locus:2095077 [details] [associations]
symbol:SHH2 "SAWADEE homeodomain homolog 2" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] InterPro:IPR001356
InterPro:IPR009057 SMART:SM00389 EMBL:CP002686 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 IPI:IPI00524767
RefSeq:NP_974333.1 UniGene:At.5471 ProteinModelPortal:F4J7N8
SMR:F4J7N8 PRIDE:F4J7N8 EnsemblPlants:AT3G18380.2 GeneID:821367
KEGG:ath:AT3G18380 OMA:TDYRLQQ PhylomeDB:F4J7N8 Uniprot:F4J7N8
Length = 349
Score = 403 (146.9 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 75/140 (53%), Positives = 98/140 (70%)
Query: 103 GSSQEPRGEKVPDV-------SEMEFEARSSKDGAWYDVDMFLAHRFLDCGEAEVRVRFV 155
G + P G VP V S +EFEA+S++DGAWYDV FLAHR L+ G+ EV+VRF
Sbjct: 120 GMTPAPSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFA 179
Query: 156 GFGADEDEWVNVKNAVRERSVPLEPSDCHKLKVGGHVLCFQERRDQGIHYDAHIAEIHRR 215
GF +EDEW+NVK VR+RS+P E S+C + G VLCFQE +DQ +++DA + + RR
Sbjct: 180 GFEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRR 239
Query: 216 MHDIRGCRCLFLVRYNHDNT 235
HD+RGCRC FLVRY+HD +
Sbjct: 240 RHDVRGCRCRFLVRYSHDQS 259
Score = 75 (31.5 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 37 KEFCQKIAKSFSCSAGRAGKPVVKWTEVQSWFQSRQ---QDRPTKVTSSTN-ESKKGSDL 92
+ + +A FS S R GK VV++ ++ +WFQ+R+ + R K N S DL
Sbjct: 36 RHILEALADKFSESPERKGKVVVQFKQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDL 95
Query: 93 PD 94
P+
Sbjct: 96 PN 97
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 250 224 0.00099 112 3 11 22 0.38 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 618 (66 KB)
Total size of DFA: 213 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.41u 0.11s 21.52t Elapsed: 00:00:01
Total cpu time: 21.41u 0.11s 21.52t Elapsed: 00:00:01
Start: Fri May 10 19:18:36 2013 End: Fri May 10 19:18:37 2013