Query 025639
Match_columns 250
No_of_seqs 147 out of 1357
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 14:26:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025639.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025639hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lvf_P GAPDH 1, glyceraldehyde 100.0 1.1E-85 3.7E-90 598.7 26.1 241 3-249 1-243 (338)
2 3pym_A GAPDH 3, glyceraldehyde 100.0 9.3E-86 3.2E-90 598.4 24.9 238 7-249 2-239 (332)
3 3v1y_O PP38, glyceraldehyde-3- 100.0 2.6E-85 9E-90 596.5 23.0 239 7-249 4-243 (337)
4 3doc_A Glyceraldehyde 3-phosph 100.0 1.1E-84 3.8E-89 591.9 23.6 238 5-249 1-241 (335)
5 3ids_C GAPDH, glyceraldehyde-3 100.0 9E-85 3.1E-89 596.2 21.6 240 5-249 1-256 (359)
6 4dib_A GAPDH, glyceraldehyde 3 100.0 3.2E-84 1.1E-88 589.9 22.1 237 6-249 4-242 (345)
7 3h9e_O Glyceraldehyde-3-phosph 100.0 8.7E-84 3E-88 588.3 24.5 237 7-249 8-245 (346)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 2.9E-82 1E-86 579.0 19.9 237 5-249 20-262 (356)
9 2b4r_O Glyceraldehyde-3-phosph 100.0 4E-81 1.4E-85 571.9 22.8 241 4-249 8-252 (345)
10 2ep7_A GAPDH, glyceraldehyde-3 100.0 6.8E-81 2.3E-85 570.2 22.4 238 5-249 1-240 (342)
11 1obf_O Glyceraldehyde 3-phosph 100.0 3.7E-80 1.3E-84 564.3 24.4 236 7-249 2-242 (335)
12 2g82_O GAPDH, glyceraldehyde-3 100.0 4.6E-73 1.6E-77 518.3 23.1 235 7-249 1-237 (331)
13 2d2i_A Glyceraldehyde 3-phosph 100.0 9.3E-72 3.2E-76 516.7 23.5 238 5-249 1-243 (380)
14 3b1j_A Glyceraldehyde 3-phosph 100.0 1.7E-70 5.6E-75 503.2 25.1 238 5-249 1-243 (339)
15 1rm4_O Glyceraldehyde 3-phosph 100.0 3E-70 1E-74 500.6 23.3 236 7-249 2-241 (337)
16 3cmc_O GAPDH, glyceraldehyde-3 100.0 5.6E-70 1.9E-74 498.8 23.1 236 7-249 2-239 (334)
17 1hdg_O Holo-D-glyceraldehyde-3 100.0 6E-69 2.1E-73 491.6 22.5 236 7-249 1-239 (332)
18 3cps_A Glyceraldehyde 3-phosph 100.0 7E-69 2.4E-73 494.2 21.7 240 5-249 16-259 (354)
19 2x5j_O E4PDH, D-erythrose-4-ph 100.0 1.7E-68 5.9E-73 490.0 22.6 238 5-249 1-243 (339)
20 1gad_O D-glyceraldehyde-3-phos 100.0 4.5E-68 1.6E-72 485.6 24.0 236 7-249 2-238 (330)
21 3e5r_O PP38, glyceraldehyde-3- 100.0 1.1E-67 3.6E-72 484.5 23.6 241 5-249 2-243 (337)
22 1u8f_O GAPDH, glyceraldehyde-3 100.0 1.3E-67 4.4E-72 483.8 23.4 240 5-249 2-241 (335)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 3.9E-56 1.3E-60 408.7 10.9 213 5-249 1-226 (343)
24 2yv3_A Aspartate-semialdehyde 100.0 3.9E-45 1.3E-49 334.2 12.1 208 7-249 1-238 (331)
25 2r00_A Aspartate-semialdehyde 100.0 1E-43 3.5E-48 325.4 16.4 210 6-249 3-244 (336)
26 1cf2_P Protein (glyceraldehyde 100.0 3.1E-43 1.1E-47 322.4 8.8 208 7-249 2-219 (337)
27 2hjs_A USG-1 protein homolog; 100.0 1.2E-42 4.2E-47 318.7 10.5 213 5-249 5-246 (340)
28 1t4b_A Aspartate-semialdehyde 100.0 6.6E-43 2.2E-47 323.5 4.1 213 7-249 2-274 (367)
29 2czc_A Glyceraldehyde-3-phosph 100.0 3.7E-41 1.3E-45 307.9 10.2 208 5-249 1-217 (334)
30 1b7g_O Protein (glyceraldehyde 100.0 3.7E-40 1.3E-44 302.3 11.9 211 7-249 2-219 (340)
31 2ep5_A 350AA long hypothetical 100.0 1.5E-39 5.1E-44 299.2 8.6 215 6-249 4-244 (350)
32 1ys4_A Aspartate-semialdehyde 100.0 5.2E-38 1.8E-42 289.2 8.5 218 5-249 7-250 (354)
33 3pwk_A Aspartate-semialdehyde 100.0 6.4E-36 2.2E-40 276.3 16.7 211 5-249 1-252 (366)
34 3uw3_A Aspartate-semialdehyde 100.0 8.4E-37 2.9E-41 283.1 7.4 211 6-248 4-281 (377)
35 3pzr_A Aspartate-semialdehyde 100.0 1.4E-36 4.8E-41 281.0 7.2 210 7-248 1-273 (370)
36 3tz6_A Aspartate-semialdehyde 100.0 8.8E-35 3E-39 266.8 17.9 208 7-248 2-254 (344)
37 4dpk_A Malonyl-COA/succinyl-CO 100.0 2.9E-36 9.9E-41 278.2 7.5 216 6-249 7-248 (359)
38 1xyg_A Putative N-acetyl-gamma 100.0 1.3E-35 4.5E-40 273.9 11.8 209 4-249 13-255 (359)
39 4dpl_A Malonyl-COA/succinyl-CO 100.0 2.9E-36 9.9E-41 278.2 6.1 216 6-249 7-248 (359)
40 2ozp_A N-acetyl-gamma-glutamyl 100.0 3.8E-35 1.3E-39 269.5 9.6 201 6-249 4-237 (345)
41 3hsk_A Aspartate-semialdehyde 100.0 6.4E-35 2.2E-39 271.0 9.7 217 6-249 19-272 (381)
42 2nqt_A N-acetyl-gamma-glutamyl 100.0 7.9E-32 2.7E-36 248.0 11.2 213 6-249 9-250 (352)
43 3dr3_A N-acetyl-gamma-glutamyl 100.0 3.3E-31 1.1E-35 242.6 7.3 206 4-249 3-242 (337)
44 1vkn_A N-acetyl-gamma-glutamyl 100.0 7.5E-29 2.6E-33 227.8 9.4 206 4-249 12-249 (351)
45 1nvm_B Acetaldehyde dehydrogen 98.6 2.5E-07 8.4E-12 83.4 10.5 153 6-187 4-163 (312)
46 1f06_A MESO-diaminopimelate D- 98.0 1.2E-05 4.1E-10 72.2 7.9 89 6-130 3-91 (320)
47 3bio_A Oxidoreductase, GFO/IDH 98.0 1.1E-05 3.7E-10 72.0 6.6 89 6-129 9-97 (304)
48 2ejw_A HDH, homoserine dehydro 97.9 2.3E-05 7.7E-10 71.2 8.0 85 6-126 3-96 (332)
49 3ing_A Homoserine dehydrogenas 97.9 2.9E-05 1E-09 70.2 7.8 34 6-39 4-43 (325)
50 4hkt_A Inositol 2-dehydrogenas 97.8 4.1E-05 1.4E-09 68.4 7.6 95 5-130 2-96 (331)
51 3do5_A HOM, homoserine dehydro 97.8 4.9E-05 1.7E-09 68.8 8.1 34 5-39 2-43 (327)
52 3mtj_A Homoserine dehydrogenas 97.8 5.1E-05 1.7E-09 71.5 8.2 92 6-129 10-111 (444)
53 3ezy_A Dehydrogenase; structur 97.8 4.5E-05 1.5E-09 68.5 7.2 97 5-130 1-97 (344)
54 3i23_A Oxidoreductase, GFO/IDH 97.7 3.4E-05 1.2E-09 69.6 5.8 97 5-130 1-98 (349)
55 4f3y_A DHPR, dihydrodipicolina 97.7 4.4E-06 1.5E-10 73.9 -0.1 157 4-199 4-171 (272)
56 3c8m_A Homoserine dehydrogenas 97.7 3.1E-05 1E-09 70.1 5.2 34 6-39 6-46 (331)
57 3mz0_A Inositol 2-dehydrogenas 97.7 8.4E-05 2.9E-09 66.7 8.0 98 5-130 1-99 (344)
58 3gdo_A Uncharacterized oxidore 97.7 0.00014 4.7E-09 65.9 9.3 92 7-130 6-98 (358)
59 3euw_A MYO-inositol dehydrogen 97.7 8.3E-05 2.8E-09 66.7 7.4 95 6-130 4-98 (344)
60 3ijp_A DHPR, dihydrodipicolina 97.7 1.2E-05 4.1E-10 71.7 1.7 97 5-126 20-117 (288)
61 3f4l_A Putative oxidoreductase 97.6 0.0001 3.5E-09 66.3 7.4 96 5-130 1-98 (345)
62 3upl_A Oxidoreductase; rossman 97.6 8.6E-05 2.9E-09 69.9 7.0 109 6-126 23-137 (446)
63 3q2i_A Dehydrogenase; rossmann 97.6 9.1E-05 3.1E-09 66.7 6.6 95 6-130 13-108 (354)
64 3ohs_X Trans-1,2-dihydrobenzen 97.6 0.00011 3.7E-09 65.7 7.0 97 5-130 1-99 (334)
65 3e82_A Putative oxidoreductase 97.6 0.00016 5.3E-09 65.7 8.1 93 6-130 7-100 (364)
66 3fhl_A Putative oxidoreductase 97.6 0.00016 5.6E-09 65.4 8.1 92 7-130 6-98 (362)
67 3db2_A Putative NADPH-dependen 97.6 0.00019 6.6E-09 64.6 8.4 95 6-130 5-99 (354)
68 3evn_A Oxidoreductase, GFO/IDH 97.5 0.00014 4.8E-09 64.9 7.2 95 7-130 6-100 (329)
69 3c1a_A Putative oxidoreductase 97.5 0.00013 4.4E-09 64.7 6.8 93 6-130 10-102 (315)
70 3kux_A Putative oxidoreductase 97.5 0.00023 7.9E-09 64.1 8.6 93 6-130 7-100 (352)
71 2ho3_A Oxidoreductase, GFO/IDH 97.5 0.00018 6.2E-09 63.9 7.7 94 7-130 2-95 (325)
72 1p9l_A Dihydrodipicolinate red 97.5 0.00015 5.2E-09 63.0 6.8 33 7-39 1-34 (245)
73 3cea_A MYO-inositol 2-dehydrog 97.5 0.00022 7.5E-09 63.7 7.9 96 6-130 8-104 (346)
74 4had_A Probable oxidoreductase 97.5 0.00024 8.2E-09 63.6 8.1 96 6-130 23-119 (350)
75 1lc0_A Biliverdin reductase A; 97.5 0.00021 7.3E-09 63.0 7.6 94 1-130 1-98 (294)
76 3ec7_A Putative dehydrogenase; 97.5 0.00026 9E-09 64.1 8.2 98 5-130 22-120 (357)
77 2dc1_A L-aspartate dehydrogena 97.5 0.00012 4E-09 62.5 5.3 134 7-186 1-136 (236)
78 3rc1_A Sugar 3-ketoreductase; 97.5 0.00015 5.1E-09 65.5 6.2 95 6-130 27-122 (350)
79 3qy9_A DHPR, dihydrodipicolina 97.4 0.00022 7.5E-09 61.9 6.8 32 7-39 4-35 (243)
80 1xea_A Oxidoreductase, GFO/IDH 97.4 0.00043 1.5E-08 61.5 8.9 95 5-130 1-96 (323)
81 3moi_A Probable dehydrogenase; 97.4 0.00011 3.7E-09 67.3 4.9 96 5-130 1-97 (387)
82 1dih_A Dihydrodipicolinate red 97.4 0.00015 5.2E-09 63.9 5.5 99 6-129 5-104 (273)
83 3e18_A Oxidoreductase; dehydro 97.4 0.00041 1.4E-08 62.8 8.6 94 6-130 5-98 (359)
84 3e9m_A Oxidoreductase, GFO/IDH 97.4 0.00028 9.7E-09 63.0 7.3 96 6-130 5-100 (330)
85 2ixa_A Alpha-N-acetylgalactosa 97.4 0.00056 1.9E-08 63.7 9.5 102 6-130 20-124 (444)
86 1tlt_A Putative oxidoreductase 97.4 0.00046 1.6E-08 61.1 8.0 93 6-130 5-98 (319)
87 3uuw_A Putative oxidoreductase 97.4 0.00034 1.2E-08 61.7 7.0 93 6-130 6-99 (308)
88 3m2t_A Probable dehydrogenase; 97.3 0.00036 1.2E-08 63.2 7.3 95 7-130 6-101 (359)
89 3ic5_A Putative saccharopine d 97.3 0.00048 1.6E-08 51.1 6.8 97 5-127 4-100 (118)
90 4ew6_A D-galactose-1-dehydroge 97.3 0.00017 5.7E-09 64.8 4.9 88 6-130 25-114 (330)
91 1h6d_A Precursor form of gluco 97.3 0.00032 1.1E-08 65.4 6.6 100 6-130 83-183 (433)
92 1ydw_A AX110P-like protein; st 97.3 0.0004 1.4E-08 62.7 6.9 99 6-130 6-104 (362)
93 1zh8_A Oxidoreductase; TM0312, 97.3 0.00041 1.4E-08 62.3 6.8 96 6-130 18-115 (340)
94 4fb5_A Probable oxidoreductase 97.2 0.00093 3.2E-08 60.0 8.5 97 5-130 23-127 (393)
95 4h3v_A Oxidoreductase domain p 97.2 0.00047 1.6E-08 61.9 6.1 98 4-130 3-108 (390)
96 1j5p_A Aspartate dehydrogenase 97.2 0.0004 1.4E-08 60.7 5.3 128 7-187 13-147 (253)
97 1r0k_A 1-deoxy-D-xylulose 5-ph 97.2 0.00046 1.6E-08 63.8 5.9 110 7-127 5-123 (388)
98 4gqa_A NAD binding oxidoreduct 97.1 0.00085 2.9E-08 61.6 6.9 96 6-130 26-129 (412)
99 3o9z_A Lipopolysaccaride biosy 97.0 0.0015 5.2E-08 58.1 7.8 97 3-130 1-105 (312)
100 3ip3_A Oxidoreductase, putativ 97.0 0.00022 7.5E-09 63.9 2.2 98 5-130 1-100 (337)
101 3oa2_A WBPB; oxidoreductase, s 97.0 0.0011 3.6E-08 59.2 6.3 96 4-130 2-106 (318)
102 2glx_A 1,5-anhydro-D-fructose 96.9 0.0027 9.1E-08 56.3 7.9 94 7-130 1-95 (332)
103 3btv_A Galactose/lactose metab 96.7 0.0006 2.1E-08 63.5 2.5 98 7-130 21-128 (438)
104 3v5n_A Oxidoreductase; structu 96.6 0.0025 8.6E-08 58.8 6.2 98 6-130 37-143 (417)
105 2p2s_A Putative oxidoreductase 96.6 0.0033 1.1E-07 55.9 6.5 95 6-130 4-99 (336)
106 4gmf_A Yersiniabactin biosynth 96.6 0.0065 2.2E-07 55.6 8.5 135 6-175 7-177 (372)
107 3u3x_A Oxidoreductase; structu 96.5 0.0025 8.5E-08 57.7 5.3 95 6-130 26-121 (361)
108 3abi_A Putative uncharacterize 96.5 0.0012 4.2E-08 59.8 3.2 93 6-129 16-108 (365)
109 3a06_A 1-deoxy-D-xylulose 5-ph 96.5 0.0083 2.9E-07 55.0 8.6 109 7-128 4-116 (376)
110 2nvw_A Galactose/lactose metab 96.5 0.002 6.8E-08 60.9 4.6 99 6-130 39-147 (479)
111 3dty_A Oxidoreductase, GFO/IDH 96.3 0.006 2.1E-07 55.8 6.7 99 6-130 12-118 (398)
112 2dt5_A AT-rich DNA-binding pro 96.3 0.0063 2.1E-07 51.5 6.0 94 6-130 80-174 (211)
113 3ius_A Uncharacterized conserv 96.2 0.035 1.2E-06 47.3 10.6 35 4-39 3-37 (286)
114 3ggo_A Prephenate dehydrogenas 96.1 0.036 1.2E-06 49.3 10.6 92 5-130 32-129 (314)
115 2vt3_A REX, redox-sensing tran 96.1 0.011 3.6E-07 50.3 6.8 94 6-130 85-179 (215)
116 3dqp_A Oxidoreductase YLBE; al 95.9 0.033 1.1E-06 45.8 8.8 32 7-39 1-33 (219)
117 2nu8_A Succinyl-COA ligase [AD 95.6 0.021 7.3E-07 50.3 6.7 91 4-128 5-97 (288)
118 3dhn_A NAD-dependent epimerase 95.6 0.033 1.1E-06 45.8 7.4 32 7-39 5-37 (227)
119 1y81_A Conserved hypothetical 95.5 0.074 2.5E-06 41.6 8.7 85 6-129 14-102 (138)
120 3ew7_A LMO0794 protein; Q8Y8U8 95.4 0.039 1.3E-06 44.9 7.4 32 7-39 1-33 (221)
121 3m2p_A UDP-N-acetylglucosamine 95.4 0.035 1.2E-06 48.1 7.4 34 5-39 1-35 (311)
122 3e48_A Putative nucleoside-dip 95.4 0.015 5.2E-07 49.8 4.8 33 7-39 1-34 (289)
123 1hdo_A Biliverdin IX beta redu 95.2 0.032 1.1E-06 44.8 6.1 32 7-39 4-36 (206)
124 1qyd_A Pinoresinol-lariciresin 95.2 0.016 5.4E-07 50.1 4.4 32 7-39 5-37 (313)
125 1ebf_A Homoserine dehydrogenas 95.2 0.017 5.8E-07 52.6 4.7 34 6-39 4-40 (358)
126 3keo_A Redox-sensing transcrip 95.2 0.023 8E-07 48.1 5.2 97 6-129 84-181 (212)
127 2bma_A Glutamate dehydrogenase 95.1 0.07 2.4E-06 50.3 8.7 103 7-126 253-365 (470)
128 3oqb_A Oxidoreductase; structu 95.0 0.025 8.7E-07 51.0 5.3 96 6-130 6-116 (383)
129 2r6j_A Eugenol synthase 1; phe 94.8 0.0076 2.6E-07 52.5 1.2 34 5-39 10-44 (318)
130 3qvo_A NMRA family protein; st 94.8 0.068 2.3E-06 44.6 7.0 34 6-39 23-57 (236)
131 3c1o_A Eugenol synthase; pheny 94.7 0.025 8.6E-07 49.2 4.4 34 5-39 3-37 (321)
132 2duw_A Putative COA-binding pr 94.7 0.14 4.8E-06 40.3 8.2 85 7-128 14-102 (145)
133 3i6i_A Putative leucoanthocyan 94.4 0.027 9.2E-07 49.7 3.8 32 7-39 11-43 (346)
134 3fwz_A Inner membrane protein 94.3 0.054 1.8E-06 41.8 5.0 42 3-48 4-45 (140)
135 1qyc_A Phenylcoumaran benzylic 94.2 0.029 9.9E-07 48.3 3.5 32 7-39 5-37 (308)
136 2d59_A Hypothetical protein PH 94.2 0.21 7.2E-06 39.1 8.2 83 7-128 23-109 (144)
137 3ego_A Probable 2-dehydropanto 94.2 0.28 9.6E-06 43.0 9.9 32 5-38 1-32 (307)
138 3e8x_A Putative NAD-dependent 94.1 0.28 9.4E-06 40.5 9.3 32 7-39 22-54 (236)
139 1zej_A HBD-9, 3-hydroxyacyl-CO 94.0 0.28 9.7E-06 43.2 9.6 39 7-50 13-51 (293)
140 3ff4_A Uncharacterized protein 94.0 0.18 6.2E-06 38.8 7.3 84 7-130 5-92 (122)
141 1bgv_A Glutamate dehydrogenase 93.8 0.13 4.4E-06 48.3 7.4 102 7-126 231-343 (449)
142 1oi7_A Succinyl-COA synthetase 93.8 0.096 3.3E-06 46.1 6.2 90 5-128 6-97 (288)
143 2yfq_A Padgh, NAD-GDH, NAD-spe 93.8 0.079 2.7E-06 49.3 5.8 32 7-39 213-244 (421)
144 3mog_A Probable 3-hydroxybutyr 93.7 0.033 1.1E-06 52.7 3.1 40 7-50 6-45 (483)
145 2x0j_A Malate dehydrogenase; o 93.6 0.12 4E-06 45.8 6.4 33 7-39 1-33 (294)
146 3llv_A Exopolyphosphatase-rela 93.5 0.072 2.5E-06 40.8 4.3 31 7-38 7-37 (141)
147 1vm6_A DHPR, dihydrodipicolina 93.5 0.18 6.3E-06 43.1 7.1 69 7-126 13-82 (228)
148 1q0q_A 1-deoxy-D-xylulose 5-ph 93.4 0.099 3.4E-06 48.2 5.7 112 5-128 9-132 (406)
149 2gas_A Isoflavone reductase; N 93.4 0.048 1.6E-06 46.9 3.4 32 7-39 3-35 (307)
150 2x4g_A Nucleoside-diphosphate- 93.4 0.091 3.1E-06 45.7 5.2 32 7-39 14-46 (342)
151 1zcj_A Peroxisomal bifunctiona 93.4 0.18 6.2E-06 47.2 7.5 30 7-37 38-67 (463)
152 2y1e_A 1-deoxy-D-xylulose 5-ph 93.3 0.11 3.7E-06 47.8 5.7 111 7-128 22-136 (398)
153 1vpd_A Tartronate semialdehyde 93.1 0.075 2.6E-06 45.9 4.3 33 4-37 3-35 (299)
154 2tmg_A Protein (glutamate dehy 93.1 0.29 9.8E-06 45.5 8.3 94 7-127 210-313 (415)
155 4ina_A Saccharopine dehydrogen 93.0 0.053 1.8E-06 49.9 3.2 98 7-122 2-102 (405)
156 3k6j_A Protein F01G10.3, confi 93.0 0.099 3.4E-06 49.2 5.1 30 7-37 55-84 (460)
157 3c24_A Putative oxidoreductase 93.0 0.12 4E-06 44.7 5.2 33 4-37 9-42 (286)
158 2wtb_A MFP2, fatty acid multif 92.9 0.23 7.8E-06 49.2 7.8 38 7-48 313-350 (725)
159 4huj_A Uncharacterized protein 92.8 0.091 3.1E-06 43.8 4.1 33 6-39 23-55 (220)
160 1lld_A L-lactate dehydrogenase 92.7 0.28 9.5E-06 42.9 7.3 32 6-37 7-39 (319)
161 3gt0_A Pyrroline-5-carboxylate 92.6 0.1 3.5E-06 44.2 4.2 41 5-49 1-45 (247)
162 1lss_A TRK system potassium up 92.4 0.16 5.5E-06 38.1 4.8 31 7-38 5-35 (140)
163 3pp8_A Glyoxylate/hydroxypyruv 92.3 0.12 4.3E-06 46.0 4.6 32 7-39 140-171 (315)
164 3r3j_A Glutamate dehydrogenase 92.2 0.46 1.6E-05 44.6 8.5 103 7-126 240-352 (456)
165 4g2n_A D-isomer specific 2-hyd 92.2 0.13 4.6E-06 46.5 4.7 31 7-38 174-204 (345)
166 3aoe_E Glutamate dehydrogenase 92.2 0.45 1.6E-05 44.2 8.3 32 7-39 219-250 (419)
167 2pi1_A D-lactate dehydrogenase 92.2 0.13 4.4E-06 46.3 4.5 31 7-38 142-172 (334)
168 1ldn_A L-lactate dehydrogenase 92.1 0.15 5.3E-06 45.2 5.0 36 1-36 1-37 (316)
169 1iuk_A Hypothetical protein TT 92.0 0.27 9.4E-06 38.4 5.8 87 7-130 14-104 (140)
170 3hg7_A D-isomer specific 2-hyd 91.9 0.15 5E-06 45.8 4.6 32 7-39 141-172 (324)
171 3evt_A Phosphoglycerate dehydr 91.9 0.15 5.2E-06 45.7 4.7 32 7-39 138-169 (324)
172 1qp8_A Formate dehydrogenase; 91.8 0.15 5.2E-06 45.1 4.5 30 7-37 125-154 (303)
173 3hwr_A 2-dehydropantoate 2-red 91.7 0.71 2.4E-05 40.6 8.8 85 6-113 19-103 (318)
174 3kb6_A D-lactate dehydrogenase 91.7 0.25 8.4E-06 44.4 5.8 30 7-37 142-171 (334)
175 2yv2_A Succinyl-COA synthetase 91.7 0.38 1.3E-05 42.4 7.0 90 6-129 13-105 (297)
176 3gg9_A D-3-phosphoglycerate de 91.6 0.16 5.6E-06 46.0 4.6 31 7-38 161-191 (352)
177 1xdw_A NAD+-dependent (R)-2-hy 91.5 0.17 5.7E-06 45.4 4.5 31 7-38 147-177 (331)
178 2g76_A 3-PGDH, D-3-phosphoglyc 91.5 0.18 6.1E-06 45.4 4.7 31 7-38 166-196 (335)
179 2yq5_A D-isomer specific 2-hyd 91.5 0.17 5.9E-06 45.7 4.6 32 7-39 149-180 (343)
180 1dxy_A D-2-hydroxyisocaproate 91.4 0.17 5.9E-06 45.3 4.5 31 7-38 146-176 (333)
181 2h78_A Hibadh, 3-hydroxyisobut 91.4 0.18 6E-06 43.8 4.4 41 4-49 2-42 (302)
182 4fcc_A Glutamate dehydrogenase 91.4 0.42 1.4E-05 44.8 7.2 102 7-126 236-347 (450)
183 4dgs_A Dehydrogenase; structur 91.3 0.19 6.6E-06 45.3 4.7 30 7-37 172-201 (340)
184 4ezb_A Uncharacterized conserv 91.3 0.22 7.5E-06 44.0 5.0 33 5-37 23-55 (317)
185 3jtm_A Formate dehydrogenase, 91.3 0.17 5.8E-06 45.8 4.3 31 7-38 165-195 (351)
186 3gvx_A Glycerate dehydrogenase 91.3 0.15 5.1E-06 45.0 3.9 31 7-38 123-153 (290)
187 2i76_A Hypothetical protein; N 91.2 0.062 2.1E-06 46.4 1.3 33 5-39 1-33 (276)
188 2ew2_A 2-dehydropantoate 2-red 91.2 0.2 6.8E-06 43.2 4.6 33 5-38 2-34 (316)
189 1gdh_A D-glycerate dehydrogena 91.2 0.2 7E-06 44.5 4.7 31 7-38 147-177 (320)
190 2yv1_A Succinyl-COA ligase [AD 91.1 0.36 1.2E-05 42.5 6.2 90 6-129 13-104 (294)
191 1mx3_A CTBP1, C-terminal bindi 91.1 0.21 7E-06 45.2 4.7 30 7-37 169-198 (347)
192 4e5n_A Thermostable phosphite 91.1 0.15 5.3E-06 45.6 3.9 31 7-38 146-176 (330)
193 1id1_A Putative potassium chan 91.0 0.28 9.6E-06 38.1 4.9 31 7-38 4-34 (153)
194 3aog_A Glutamate dehydrogenase 91.0 1 3.6E-05 42.0 9.5 32 7-39 236-267 (440)
195 3l4b_C TRKA K+ channel protien 91.0 0.17 5.7E-06 41.9 3.7 31 7-38 1-31 (218)
196 3g0o_A 3-hydroxyisobutyrate de 90.9 0.22 7.4E-06 43.5 4.6 41 5-49 6-46 (303)
197 4hy3_A Phosphoglycerate oxidor 90.9 0.19 6.6E-06 45.8 4.4 31 7-38 177-207 (365)
198 3gg2_A Sugar dehydrogenase, UD 90.9 0.2 6.9E-06 46.7 4.6 42 5-50 1-42 (450)
199 2cuk_A Glycerate dehydrogenase 90.9 0.21 7.3E-06 44.2 4.6 31 7-38 145-175 (311)
200 3d1l_A Putative NADP oxidoredu 90.8 0.24 8.2E-06 42.1 4.7 32 7-39 11-42 (266)
201 1gtm_A Glutamate dehydrogenase 90.8 0.24 8.1E-06 46.0 4.9 32 7-39 213-245 (419)
202 3b1f_A Putative prephenate deh 90.7 0.18 6.3E-06 43.4 3.9 34 4-37 3-38 (290)
203 1wwk_A Phosphoglycerate dehydr 90.7 0.23 7.9E-06 43.9 4.6 31 7-38 143-173 (307)
204 2vns_A Metalloreductase steap3 90.6 0.22 7.7E-06 41.3 4.2 33 5-38 27-59 (215)
205 4dll_A 2-hydroxy-3-oxopropiona 90.6 0.23 7.9E-06 43.8 4.6 31 6-37 31-61 (320)
206 3qha_A Putative oxidoreductase 90.6 0.17 6E-06 44.0 3.7 32 6-38 15-46 (296)
207 2ekl_A D-3-phosphoglycerate de 90.5 0.24 8.3E-06 43.9 4.6 31 7-38 143-173 (313)
208 4gbj_A 6-phosphogluconate dehy 90.5 0.21 7.3E-06 43.8 4.1 34 4-38 3-36 (297)
209 3oet_A Erythronate-4-phosphate 90.5 0.24 8.2E-06 45.5 4.6 30 7-37 120-149 (381)
210 2o4c_A Erythronate-4-phosphate 90.4 0.24 8.3E-06 45.4 4.6 30 7-37 117-146 (380)
211 1z82_A Glycerol-3-phosphate de 90.4 0.25 8.6E-06 43.6 4.6 34 4-38 12-45 (335)
212 1j4a_A D-LDH, D-lactate dehydr 90.4 0.24 8.3E-06 44.3 4.5 31 7-38 147-177 (333)
213 1sc6_A PGDH, D-3-phosphoglycer 90.4 0.24 8.3E-06 45.7 4.6 31 7-38 146-176 (404)
214 3au8_A 1-deoxy-D-xylulose 5-ph 90.4 0.28 9.6E-06 46.0 4.9 42 7-49 78-124 (488)
215 2w2k_A D-mandelate dehydrogena 90.3 0.27 9.2E-06 44.3 4.7 31 7-38 164-195 (348)
216 2g1u_A Hypothetical protein TM 90.1 0.36 1.2E-05 37.6 4.8 31 7-38 20-50 (155)
217 2gcg_A Glyoxylate reductase/hy 90.1 0.24 8.3E-06 44.1 4.2 31 7-38 156-186 (330)
218 3ba1_A HPPR, hydroxyphenylpyru 90.0 0.25 8.6E-06 44.3 4.3 30 7-37 165-194 (333)
219 2dbq_A Glyoxylate reductase; D 90.0 0.28 9.7E-06 43.8 4.6 31 7-38 151-181 (334)
220 3sc6_A DTDP-4-dehydrorhamnose 89.9 0.21 7.2E-06 42.4 3.5 34 4-38 3-37 (287)
221 3d0o_A L-LDH 1, L-lactate dehy 89.9 0.58 2E-05 41.4 6.5 33 6-39 6-39 (317)
222 2zcu_A Uncharacterized oxidore 89.9 0.18 6.1E-06 42.6 3.0 32 8-39 1-34 (286)
223 1yb4_A Tartronic semialdehyde 89.8 0.22 7.4E-06 42.8 3.6 30 7-37 4-33 (295)
224 3dfu_A Uncharacterized protein 89.8 0.12 4.2E-06 44.2 1.9 34 5-39 5-38 (232)
225 2d0i_A Dehydrogenase; structur 89.8 0.28 9.4E-06 43.9 4.3 31 7-38 147-177 (333)
226 2hmt_A YUAA protein; RCK, KTN, 89.7 0.28 9.6E-06 36.8 3.7 31 7-38 7-37 (144)
227 2nac_A NAD-dependent formate d 89.5 0.29 9.8E-06 45.1 4.3 31 7-38 192-222 (393)
228 2jl1_A Triphenylmethane reduct 89.4 0.36 1.2E-05 40.8 4.6 32 8-39 2-35 (287)
229 2axq_A Saccharopine dehydrogen 89.4 0.47 1.6E-05 44.5 5.8 94 7-127 24-117 (467)
230 2ahr_A Putative pyrroline carb 89.4 0.34 1.2E-05 40.9 4.4 36 7-46 4-39 (259)
231 3dtt_A NADP oxidoreductase; st 89.3 0.39 1.3E-05 40.6 4.7 32 6-38 19-50 (245)
232 3pef_A 6-phosphogluconate dehy 89.3 0.36 1.2E-05 41.6 4.6 30 7-37 2-31 (287)
233 3i83_A 2-dehydropantoate 2-red 89.3 0.36 1.2E-05 42.5 4.6 34 5-39 1-34 (320)
234 2g5c_A Prephenate dehydrogenas 89.3 0.38 1.3E-05 41.1 4.7 31 7-37 2-33 (281)
235 1y1p_A ARII, aldehyde reductas 89.3 3 0.0001 35.7 10.5 32 7-39 12-44 (342)
236 3l6d_A Putative oxidoreductase 89.0 0.33 1.1E-05 42.5 4.2 41 6-50 9-49 (306)
237 4b4o_A Epimerase family protei 89.0 0.4 1.4E-05 41.0 4.6 31 7-38 1-32 (298)
238 3h2s_A Putative NADH-flavin re 89.0 0.43 1.5E-05 38.7 4.6 32 7-39 1-33 (224)
239 1t2a_A GDP-mannose 4,6 dehydra 89.0 0.39 1.3E-05 42.5 4.7 37 2-39 20-57 (375)
240 3c85_A Putative glutathione-re 88.9 0.31 1.1E-05 38.9 3.6 31 7-38 40-71 (183)
241 2z2v_A Hypothetical protein PH 88.8 0.19 6.4E-06 45.6 2.5 92 7-129 17-108 (365)
242 3k5p_A D-3-phosphoglycerate de 88.8 0.38 1.3E-05 44.6 4.6 30 7-37 157-186 (416)
243 2p4q_A 6-phosphogluconate dehy 88.6 0.34 1.2E-05 45.8 4.2 43 4-50 8-50 (497)
244 3doj_A AT3G25530, dehydrogenas 88.6 0.42 1.4E-05 41.8 4.6 31 7-38 22-52 (310)
245 1f0y_A HCDH, L-3-hydroxyacyl-C 88.6 0.51 1.8E-05 41.0 5.1 32 4-37 14-45 (302)
246 2cvz_A Dehydrogenase, 3-hydrox 88.6 0.34 1.2E-05 41.4 3.9 29 7-37 2-30 (289)
247 3obb_A Probable 3-hydroxyisobu 88.5 0.41 1.4E-05 42.1 4.5 43 3-50 1-43 (300)
248 3fpc_A NADP-dependent alcohol 88.4 1.8 6.3E-05 38.1 8.8 91 8-121 169-260 (352)
249 2j6i_A Formate dehydrogenase; 88.4 0.36 1.2E-05 43.8 4.1 31 7-38 165-196 (364)
250 3cky_A 2-hydroxymethyl glutara 88.3 0.44 1.5E-05 41.0 4.4 30 7-37 5-34 (301)
251 2f1k_A Prephenate dehydrogenas 88.2 0.48 1.6E-05 40.4 4.6 30 7-37 1-30 (279)
252 3pdu_A 3-hydroxyisobutyrate de 88.2 0.3 1E-05 42.1 3.3 31 7-38 2-32 (287)
253 1jay_A Coenzyme F420H2:NADP+ o 88.1 0.56 1.9E-05 38.1 4.8 31 7-38 1-32 (212)
254 2pv7_A T-protein [includes: ch 88.0 0.5 1.7E-05 41.2 4.7 33 4-37 19-52 (298)
255 3d4o_A Dipicolinate synthase s 87.9 0.51 1.8E-05 41.0 4.7 31 7-38 156-186 (293)
256 1guz_A Malate dehydrogenase; o 87.9 1.1 3.9E-05 39.3 6.9 31 7-37 1-32 (310)
257 2a35_A Hypothetical protein PA 87.8 0.47 1.6E-05 38.1 4.1 34 5-38 4-39 (215)
258 3two_A Mannitol dehydrogenase; 87.8 0.87 3E-05 40.2 6.1 127 8-171 179-308 (348)
259 2bka_A CC3, TAT-interacting pr 87.6 1.6 5.4E-05 35.7 7.3 32 7-38 19-52 (242)
260 3hn2_A 2-dehydropantoate 2-red 87.6 0.4 1.4E-05 42.0 3.8 34 5-39 1-34 (312)
261 3ktd_A Prephenate dehydrogenas 87.6 0.49 1.7E-05 42.6 4.4 42 4-49 6-47 (341)
262 3ldh_A Lactate dehydrogenase; 87.5 0.98 3.3E-05 40.5 6.3 32 7-39 22-54 (330)
263 2uyy_A N-PAC protein; long-cha 87.5 0.51 1.8E-05 41.1 4.4 30 7-37 31-60 (316)
264 3nep_X Malate dehydrogenase; h 87.4 0.31 1.1E-05 43.4 3.0 30 7-36 1-31 (314)
265 1t2d_A LDH-P, L-lactate dehydr 87.4 0.44 1.5E-05 42.4 4.0 32 7-39 5-36 (322)
266 1evy_A Glycerol-3-phosphate de 87.4 0.46 1.6E-05 42.3 4.1 33 5-38 13-46 (366)
267 2rir_A Dipicolinate synthase, 87.3 0.58 2E-05 40.8 4.7 31 7-38 158-188 (300)
268 1i36_A Conserved hypothetical 87.3 0.53 1.8E-05 39.7 4.3 29 7-36 1-29 (264)
269 3p7m_A Malate dehydrogenase; p 87.3 0.44 1.5E-05 42.5 3.9 29 7-36 6-35 (321)
270 3dfz_A SIRC, precorrin-2 dehyd 87.1 2.3 7.7E-05 36.0 8.0 30 7-37 32-61 (223)
271 3g17_A Similar to 2-dehydropan 87.0 0.32 1.1E-05 42.3 2.8 32 5-37 1-32 (294)
272 2gn4_A FLAA1 protein, UDP-GLCN 87.0 1.3 4.4E-05 39.1 6.8 32 7-38 22-55 (344)
273 1wdk_A Fatty oxidation complex 86.9 0.23 7.9E-06 49.1 2.0 30 7-37 315-344 (715)
274 4e21_A 6-phosphogluconate dehy 86.9 0.6 2.1E-05 42.2 4.6 40 7-50 23-62 (358)
275 3qsg_A NAD-binding phosphogluc 86.9 0.47 1.6E-05 41.6 3.8 30 7-37 25-55 (312)
276 2raf_A Putative dinucleotide-b 86.9 0.67 2.3E-05 38.2 4.6 30 6-36 19-48 (209)
277 1bg6_A N-(1-D-carboxylethyl)-L 86.8 0.63 2.2E-05 40.9 4.6 30 7-37 5-34 (359)
278 3k92_A NAD-GDH, NAD-specific g 86.7 1.9 6.7E-05 40.0 8.0 32 7-39 222-253 (424)
279 1ur5_A Malate dehydrogenase; o 86.7 0.71 2.4E-05 40.7 4.9 34 5-39 1-34 (309)
280 2gf2_A Hibadh, 3-hydroxyisobut 86.6 0.51 1.7E-05 40.5 3.8 30 7-37 1-30 (296)
281 3l9w_A Glutathione-regulated p 86.6 0.76 2.6E-05 42.3 5.2 39 7-49 5-43 (413)
282 2iz1_A 6-phosphogluconate dehy 86.5 0.56 1.9E-05 43.9 4.3 32 6-38 5-36 (474)
283 3vps_A TUNA, NAD-dependent epi 86.5 0.64 2.2E-05 39.7 4.4 34 5-39 6-40 (321)
284 3mw9_A GDH 1, glutamate dehydr 86.4 6.6 0.00023 37.2 11.6 32 7-39 245-276 (501)
285 3r6d_A NAD-dependent epimerase 86.4 0.74 2.5E-05 37.5 4.6 32 7-39 5-39 (221)
286 1ygy_A PGDH, D-3-phosphoglycer 86.4 0.65 2.2E-05 44.2 4.7 31 7-38 143-173 (529)
287 2ydy_A Methionine adenosyltran 86.3 0.75 2.6E-05 39.4 4.7 32 5-37 1-33 (315)
288 3jv7_A ADH-A; dehydrogenase, n 86.1 2.2 7.5E-05 37.5 7.8 134 8-171 174-310 (345)
289 2rcy_A Pyrroline carboxylate r 85.9 0.53 1.8E-05 39.6 3.5 23 7-29 5-27 (262)
290 3c7a_A Octopine dehydrogenase; 85.9 0.71 2.4E-05 41.7 4.6 33 5-37 1-33 (404)
291 1ks9_A KPA reductase;, 2-dehyd 85.9 0.77 2.6E-05 38.9 4.6 31 7-38 1-31 (291)
292 3st7_A Capsular polysaccharide 85.8 0.8 2.7E-05 40.4 4.8 43 7-50 1-44 (369)
293 2zyd_A 6-phosphogluconate dehy 85.7 0.65 2.2E-05 43.6 4.3 42 4-49 12-54 (480)
294 4g65_A TRK system potassium up 85.7 0.79 2.7E-05 42.8 4.9 40 6-49 3-42 (461)
295 3ip1_A Alcohol dehydrogenase, 85.6 2.7 9.2E-05 37.9 8.3 29 8-37 216-245 (404)
296 3nkl_A UDP-D-quinovosamine 4-d 85.6 1.2 3.9E-05 33.8 5.0 33 7-39 5-37 (141)
297 4ej6_A Putative zinc-binding d 85.5 0.57 2E-05 42.0 3.7 29 8-37 185-214 (370)
298 2o3j_A UDP-glucose 6-dehydroge 85.2 0.7 2.4E-05 43.3 4.3 42 5-49 8-50 (481)
299 3gpi_A NAD-dependent epimerase 84.8 0.84 2.9E-05 38.6 4.3 32 7-39 4-35 (286)
300 2yjz_A Metalloreductase steap4 85.0 0.18 6.3E-06 41.7 0.0 32 5-37 18-49 (201)
301 3slg_A PBGP3 protein; structur 84.6 0.82 2.8E-05 40.2 4.2 34 6-39 24-58 (372)
302 1ff9_A Saccharopine reductase; 84.5 1.8 6.2E-05 40.2 6.7 31 7-38 4-34 (450)
303 1yqd_A Sinapyl alcohol dehydro 84.4 1.2 3.9E-05 39.8 5.2 30 8-38 190-219 (366)
304 3d64_A Adenosylhomocysteinase; 84.0 0.99 3.4E-05 42.8 4.7 30 7-37 278-307 (494)
305 1np3_A Ketol-acid reductoisome 83.9 0.88 3E-05 40.5 4.2 31 7-38 17-47 (338)
306 1ek6_A UDP-galactose 4-epimera 83.9 1 3.4E-05 39.1 4.5 33 5-38 1-34 (348)
307 3uog_A Alcohol dehydrogenase; 83.8 2.5 8.5E-05 37.5 7.1 30 8-38 192-221 (363)
308 2qyt_A 2-dehydropantoate 2-red 83.7 0.94 3.2E-05 39.0 4.1 33 5-37 7-44 (317)
309 3oj0_A Glutr, glutamyl-tRNA re 83.6 0.68 2.3E-05 35.5 2.9 31 7-39 22-52 (144)
310 3tri_A Pyrroline-5-carboxylate 83.4 0.99 3.4E-05 39.0 4.2 31 6-37 3-36 (280)
311 2yy7_A L-threonine dehydrogena 82.9 0.78 2.7E-05 39.1 3.3 34 5-38 1-36 (312)
312 3ghy_A Ketopantoate reductase 82.8 1.1 3.6E-05 39.6 4.2 30 7-37 4-33 (335)
313 1yqg_A Pyrroline-5-carboxylate 82.8 1 3.5E-05 37.8 4.0 31 7-37 1-31 (263)
314 3phh_A Shikimate dehydrogenase 82.6 13 0.00044 32.1 11.0 32 7-39 119-150 (269)
315 3ruf_A WBGU; rossmann fold, UD 82.4 1.4 4.7E-05 38.3 4.8 33 6-39 25-58 (351)
316 2d8a_A PH0655, probable L-thre 82.4 1.7 5.9E-05 38.2 5.5 29 8-37 170-199 (348)
317 2dq4_A L-threonine 3-dehydroge 82.3 1.7 5.9E-05 38.2 5.4 29 8-37 167-196 (343)
318 2c20_A UDP-glucose 4-epimerase 82.1 1.4 4.8E-05 37.8 4.6 31 7-38 2-33 (330)
319 1txg_A Glycerol-3-phosphate de 82.0 1.1 3.7E-05 39.0 3.9 31 7-38 1-31 (335)
320 1oju_A MDH, malate dehydrogena 82.0 1.8 6.1E-05 38.0 5.3 30 7-36 1-31 (294)
321 1v8b_A Adenosylhomocysteinase; 82.0 1 3.4E-05 42.6 3.9 30 7-37 258-287 (479)
322 1uuf_A YAHK, zinc-type alcohol 81.9 1.1 3.6E-05 40.3 3.9 30 8-38 197-226 (369)
323 1pgj_A 6PGDH, 6-PGDH, 6-phosph 81.8 1.1 3.8E-05 41.9 4.1 31 7-38 2-32 (478)
324 5mdh_A Malate dehydrogenase; o 81.8 2.7 9.3E-05 37.5 6.5 24 6-29 3-27 (333)
325 1mv8_A GMD, GDP-mannose 6-dehy 81.7 1.2 4.1E-05 40.9 4.3 39 7-49 1-39 (436)
326 3mwd_B ATP-citrate synthase; A 81.7 3.5 0.00012 37.0 7.2 98 6-130 10-115 (334)
327 3h9u_A Adenosylhomocysteinase; 81.6 1.4 4.6E-05 41.2 4.6 30 7-37 212-241 (436)
328 3kkj_A Amine oxidase, flavin-c 81.5 1.5 5.1E-05 34.6 4.3 33 5-38 1-33 (336)
329 4aj2_A L-lactate dehydrogenase 81.5 2.4 8.2E-05 37.9 6.0 32 7-39 20-52 (331)
330 2pgd_A 6-phosphogluconate dehy 81.2 1.2 4.2E-05 41.6 4.2 31 7-38 3-33 (482)
331 3n58_A Adenosylhomocysteinase; 81.1 1.5 5E-05 41.3 4.6 30 7-37 248-277 (464)
332 3ay3_A NAD-dependent epimerase 81.0 0.73 2.5E-05 38.7 2.4 33 5-38 1-34 (267)
333 2q3e_A UDP-glucose 6-dehydroge 81.0 1.1 3.7E-05 41.7 3.8 39 7-48 6-45 (467)
334 4gwg_A 6-phosphogluconate dehy 80.9 1.3 4.3E-05 41.8 4.2 40 7-50 5-44 (484)
335 3ado_A Lambda-crystallin; L-gu 80.6 2 6.8E-05 38.3 5.2 46 1-50 1-46 (319)
336 2d4a_B Malate dehydrogenase; a 80.5 1.2 4E-05 39.3 3.6 28 8-36 1-29 (308)
337 3zwc_A Peroxisomal bifunctiona 80.5 2.9 9.7E-05 41.6 6.7 103 7-131 317-431 (742)
338 1c1d_A L-phenylalanine dehydro 80.4 1.7 5.7E-05 39.4 4.7 31 7-39 176-206 (355)
339 2c5a_A GDP-mannose-3', 5'-epim 80.4 2.1 7.2E-05 37.9 5.3 32 7-39 30-62 (379)
340 4e12_A Diketoreductase; oxidor 80.2 1.7 6E-05 37.3 4.6 39 7-49 5-43 (283)
341 2wm3_A NMRA-like family domain 80.2 1.5 5E-05 37.3 4.1 33 7-39 6-39 (299)
342 2izz_A Pyrroline-5-carboxylate 80.2 1.5 5.1E-05 38.5 4.2 32 7-38 23-57 (322)
343 1orr_A CDP-tyvelose-2-epimeras 80.1 1.7 5.8E-05 37.4 4.5 31 7-38 2-33 (347)
344 2hjr_A Malate dehydrogenase; m 79.8 2.1 7.1E-05 38.0 5.0 35 4-39 12-46 (328)
345 1e6u_A GDP-fucose synthetase; 79.4 1.8 6.2E-05 37.0 4.4 30 7-37 4-34 (321)
346 1n7h_A GDP-D-mannose-4,6-dehyd 79.4 1.9 6.6E-05 38.0 4.7 34 5-39 27-61 (381)
347 3pid_A UDP-glucose 6-dehydroge 79.3 1.8 6.2E-05 40.2 4.6 39 7-50 37-75 (432)
348 4dvj_A Putative zinc-dependent 79.2 1.6 5.3E-05 39.0 4.0 91 7-121 173-264 (363)
349 1e3j_A NADP(H)-dependent ketos 78.9 7.2 0.00024 34.2 8.3 29 8-37 171-199 (352)
350 2y0c_A BCEC, UDP-glucose dehyd 78.9 1.9 6.4E-05 40.4 4.6 41 6-50 8-48 (478)
351 3qwb_A Probable quinone oxidor 78.9 2.9 9.9E-05 36.5 5.6 30 8-38 151-181 (334)
352 2ph5_A Homospermidine synthase 78.8 1.2 4.2E-05 42.0 3.3 95 7-129 14-114 (480)
353 3eag_A UDP-N-acetylmuramate:L- 78.8 9.8 0.00034 33.3 9.1 92 4-127 3-95 (326)
354 4g65_A TRK system potassium up 78.6 1.3 4.3E-05 41.4 3.3 93 7-126 236-331 (461)
355 3m6i_A L-arabinitol 4-dehydrog 78.6 7.9 0.00027 34.0 8.5 29 8-37 182-211 (363)
356 1xq6_A Unknown protein; struct 78.3 2.6 9E-05 34.3 4.9 32 7-38 5-38 (253)
357 3jyn_A Quinone oxidoreductase; 78.2 2 6.8E-05 37.5 4.3 39 8-50 143-182 (325)
358 3uko_A Alcohol dehydrogenase c 78.2 3.2 0.00011 37.0 5.8 29 8-37 196-225 (378)
359 2dpo_A L-gulonate 3-dehydrogen 78.0 2 7E-05 38.0 4.4 40 7-50 7-46 (319)
360 3ko8_A NAD-dependent epimerase 77.5 2.3 8E-05 36.1 4.5 32 7-39 1-33 (312)
361 3gvp_A Adenosylhomocysteinase 77.5 2.2 7.5E-05 39.7 4.6 30 7-37 221-250 (435)
362 1y7t_A Malate dehydrogenase; N 77.5 2.6 9E-05 36.9 4.9 32 6-37 4-42 (327)
363 2aef_A Calcium-gated potassium 77.3 1.4 4.9E-05 36.4 3.0 30 6-37 9-38 (234)
364 1leh_A Leucine dehydrogenase; 77.3 3.3 0.00011 37.5 5.6 34 7-44 174-207 (364)
365 1rpn_A GDP-mannose 4,6-dehydra 77.3 2.5 8.4E-05 36.3 4.6 34 5-39 13-47 (335)
366 3pqe_A L-LDH, L-lactate dehydr 77.1 2.3 7.7E-05 37.9 4.4 30 7-36 6-36 (326)
367 2rh8_A Anthocyanidin reductase 76.9 2.5 8.5E-05 36.4 4.6 33 5-38 8-41 (338)
368 3s2e_A Zinc-containing alcohol 76.8 2.7 9.3E-05 36.8 4.9 38 8-49 169-206 (340)
369 1i24_A Sulfolipid biosynthesis 76.8 2.4 8.2E-05 37.5 4.5 31 7-38 12-43 (404)
370 2hun_A 336AA long hypothetical 76.8 2.1 7.3E-05 36.8 4.1 32 7-38 4-37 (336)
371 1rjw_A ADH-HT, alcohol dehydro 76.4 3.9 0.00013 35.8 5.8 29 8-37 167-195 (339)
372 2bll_A Protein YFBG; decarboxy 76.4 2.8 9.6E-05 36.0 4.8 33 7-39 1-34 (345)
373 3sxp_A ADP-L-glycero-D-mannohe 76.3 3.3 0.00011 36.2 5.2 32 7-39 11-45 (362)
374 1xa0_A Putative NADPH dependen 76.1 5.4 0.00018 34.6 6.5 31 8-39 152-183 (328)
375 1vj0_A Alcohol dehydrogenase, 75.8 4.9 0.00017 35.9 6.3 40 8-50 198-237 (380)
376 1pl8_A Human sorbitol dehydrog 75.7 5 0.00017 35.4 6.3 29 8-37 174-203 (356)
377 1v9l_A Glutamate dehydrogenase 75.7 3.1 0.00011 38.5 5.1 32 7-39 211-242 (421)
378 4egb_A DTDP-glucose 4,6-dehydr 75.6 2.4 8.3E-05 36.6 4.2 33 7-39 25-59 (346)
379 3k96_A Glycerol-3-phosphate de 75.3 2.6 9.1E-05 37.8 4.4 31 6-37 29-59 (356)
380 4a2c_A Galactitol-1-phosphate 75.2 7.7 0.00026 33.7 7.4 92 8-121 163-254 (346)
381 2q1w_A Putative nucleotide sug 75.2 3.2 0.00011 35.9 4.8 31 7-38 22-53 (333)
382 3fbg_A Putative arginate lyase 75.1 3.1 0.00011 36.6 4.7 39 8-50 153-192 (346)
383 1yj8_A Glycerol-3-phosphate de 74.9 1.7 5.9E-05 38.8 3.1 24 5-28 20-43 (375)
384 3krt_A Crotonyl COA reductase; 74.8 3.9 0.00013 37.5 5.5 39 8-50 231-270 (456)
385 1dlj_A UDP-glucose dehydrogena 74.6 2.6 9.1E-05 38.3 4.3 29 7-37 1-29 (402)
386 2ewd_A Lactate dehydrogenase,; 74.4 2.6 8.9E-05 36.9 4.0 30 7-36 5-34 (317)
387 1xgk_A Nitrogen metabolite rep 74.4 2.9 0.0001 37.0 4.4 33 6-39 5-38 (352)
388 1f8f_A Benzyl alcohol dehydrog 74.2 2.4 8.2E-05 37.7 3.8 29 8-37 193-222 (371)
389 2jhf_A Alcohol dehydrogenase E 74.2 7.1 0.00024 34.6 6.9 29 8-37 194-223 (374)
390 2fp4_A Succinyl-COA ligase [GD 74.1 4.1 0.00014 35.8 5.3 86 7-126 14-101 (305)
391 2d5c_A AROE, shikimate 5-dehyd 74.0 2.9 9.9E-05 35.4 4.1 30 8-38 118-147 (263)
392 1e3i_A Alcohol dehydrogenase, 73.9 5.3 0.00018 35.5 6.0 29 8-37 198-227 (376)
393 2b69_A UDP-glucuronate decarbo 73.9 3.4 0.00012 35.7 4.7 31 7-38 28-59 (343)
394 1p0f_A NADP-dependent alcohol 73.8 4.2 0.00014 36.1 5.3 29 8-37 194-223 (373)
395 1vl0_A DTDP-4-dehydrorhamnose 73.8 3.2 0.00011 34.9 4.4 30 7-37 13-43 (292)
396 2cf5_A Atccad5, CAD, cinnamyl 73.6 1.9 6.6E-05 38.2 3.0 30 8-38 183-212 (357)
397 4b8w_A GDP-L-fucose synthase; 73.5 2.6 8.8E-05 35.4 3.7 24 6-29 6-30 (319)
398 1oc2_A DTDP-glucose 4,6-dehydr 73.4 2.7 9.3E-05 36.3 3.9 32 7-38 5-38 (348)
399 2b5w_A Glucose dehydrogenase; 73.3 4 0.00014 36.0 5.0 32 7-39 174-208 (357)
400 2vhw_A Alanine dehydrogenase; 73.1 3.5 0.00012 37.2 4.7 31 7-38 169-199 (377)
401 3ce6_A Adenosylhomocysteinase; 73.0 3.3 0.00011 39.1 4.6 30 7-37 275-304 (494)
402 3oh8_A Nucleoside-diphosphate 72.9 3.4 0.00012 38.5 4.7 32 7-39 148-180 (516)
403 1sb8_A WBPP; epimerase, 4-epim 72.8 3.9 0.00013 35.5 4.8 32 7-39 28-60 (352)
404 3gqv_A Enoyl reductase; medium 72.7 7.5 0.00026 34.5 6.7 29 8-37 167-196 (371)
405 3q2o_A Phosphoribosylaminoimid 72.6 3.7 0.00013 36.7 4.7 31 7-38 15-45 (389)
406 2p5y_A UDP-glucose 4-epimerase 72.5 3.9 0.00013 34.7 4.7 31 7-38 1-32 (311)
407 1hyh_A L-hicdh, L-2-hydroxyiso 72.5 3.2 0.00011 36.1 4.2 31 7-37 2-33 (309)
408 2eih_A Alcohol dehydrogenase; 72.4 6.5 0.00022 34.3 6.2 31 7-38 168-199 (343)
409 1n2s_A DTDP-4-, DTDP-glucose o 72.4 3 0.0001 35.2 3.8 30 7-38 1-31 (299)
410 3nx4_A Putative oxidoreductase 72.4 3.9 0.00013 35.4 4.6 31 8-39 149-180 (324)
411 2r85_A PURP protein PF1517; AT 72.4 3.4 0.00011 35.6 4.2 31 5-37 1-31 (334)
412 2z1m_A GDP-D-mannose dehydrata 72.3 3.8 0.00013 35.1 4.5 32 7-39 4-36 (345)
413 2i99_A MU-crystallin homolog; 71.9 4.4 0.00015 35.4 4.9 33 7-39 136-168 (312)
414 2c29_D Dihydroflavonol 4-reduc 71.4 3.1 0.00011 35.8 3.8 36 1-38 1-37 (337)
415 1cdo_A Alcohol dehydrogenase; 71.4 7.5 0.00026 34.4 6.4 29 8-37 195-224 (374)
416 1a5z_A L-lactate dehydrogenase 71.3 3.2 0.00011 36.5 3.9 30 7-37 1-32 (319)
417 3ehe_A UDP-glucose 4-epimerase 71.3 3.4 0.00012 35.2 3.9 30 7-38 2-32 (313)
418 3enk_A UDP-glucose 4-epimerase 71.2 4.3 0.00015 34.9 4.6 31 7-38 6-37 (341)
419 2fzw_A Alcohol dehydrogenase c 71.0 4.8 0.00017 35.6 5.0 29 8-37 193-222 (373)
420 2pbz_A Hypothetical protein; N 70.9 3.9 0.00013 36.3 4.3 33 5-39 1-33 (320)
421 3g79_A NDP-N-acetyl-D-galactos 70.9 3.7 0.00013 38.6 4.4 31 7-38 19-51 (478)
422 2pk3_A GDP-6-deoxy-D-LYXO-4-he 70.6 4.6 0.00016 34.4 4.6 33 6-39 12-45 (321)
423 2vn8_A Reticulon-4-interacting 70.2 4.9 0.00017 35.7 4.9 29 8-37 186-215 (375)
424 1db3_A GDP-mannose 4,6-dehydra 70.0 4.7 0.00016 35.1 4.7 31 7-38 2-33 (372)
425 4id9_A Short-chain dehydrogena 69.9 4.1 0.00014 35.2 4.2 32 7-39 20-52 (347)
426 1x0v_A GPD-C, GPDH-C, glycerol 69.9 2.6 9E-05 36.9 3.0 31 7-37 9-45 (354)
427 1kew_A RMLB;, DTDP-D-glucose 4 69.7 3.9 0.00013 35.4 4.1 32 7-38 1-33 (361)
428 2v6b_A L-LDH, L-lactate dehydr 69.7 4.7 0.00016 35.2 4.6 29 7-36 1-31 (304)
429 2h6e_A ADH-4, D-arabinose 1-de 69.7 3.4 0.00012 36.2 3.7 29 8-37 173-203 (344)
430 1pzg_A LDH, lactate dehydrogen 69.7 5.1 0.00018 35.5 4.9 33 6-39 9-41 (331)
431 4dup_A Quinone oxidoreductase; 69.2 5.5 0.00019 35.1 5.0 39 8-50 170-209 (353)
432 2dkn_A 3-alpha-hydroxysteroid 69.1 5.5 0.00019 32.5 4.7 30 8-38 3-33 (255)
433 2dph_A Formaldehyde dismutase; 68.9 8.8 0.0003 34.3 6.4 29 8-37 188-217 (398)
434 1gpj_A Glutamyl-tRNA reductase 68.9 3.8 0.00013 37.3 3.9 32 7-39 168-200 (404)
435 1udb_A Epimerase, UDP-galactos 68.9 4.9 0.00017 34.5 4.5 30 7-37 1-31 (338)
436 3d7l_A LIN1944 protein; APC893 68.8 5.4 0.00019 31.5 4.5 30 7-38 4-34 (202)
437 2hk9_A Shikimate dehydrogenase 68.7 3.9 0.00013 35.0 3.8 31 7-38 130-160 (275)
438 3tl2_A Malate dehydrogenase; c 68.7 5.4 0.00018 35.3 4.8 29 7-36 9-38 (315)
439 4hb9_A Similarities with proba 68.5 5.1 0.00017 35.0 4.6 31 6-37 1-31 (412)
440 1x13_A NAD(P) transhydrogenase 68.3 4.9 0.00017 36.6 4.6 30 7-37 173-202 (401)
441 3hhp_A Malate dehydrogenase; M 68.3 4.8 0.00016 35.6 4.3 22 7-28 1-23 (312)
442 3orq_A N5-carboxyaminoimidazol 68.0 5.6 0.00019 35.5 4.8 31 7-38 13-43 (377)
443 2pzm_A Putative nucleotide sug 67.6 5.2 0.00018 34.5 4.4 31 7-38 21-52 (330)
444 1eq2_A ADP-L-glycero-D-mannohe 67.6 5.6 0.00019 33.5 4.5 32 8-39 1-33 (310)
445 3h8v_A Ubiquitin-like modifier 67.4 3.6 0.00012 36.2 3.3 23 7-29 37-59 (292)
446 1b8p_A Protein (malate dehydro 67.0 5.7 0.0002 35.0 4.6 31 6-36 5-42 (329)
447 1iow_A DD-ligase, DDLB, D-ALA\ 66.6 6.2 0.00021 33.4 4.6 33 5-38 1-42 (306)
448 3h5n_A MCCB protein; ubiquitin 66.5 6.1 0.00021 35.4 4.7 114 7-128 119-240 (353)
449 4a7p_A UDP-glucose dehydrogena 66.5 5.6 0.00019 36.9 4.6 32 6-38 8-39 (446)
450 1rkx_A CDP-glucose-4,6-dehydra 66.5 6.1 0.00021 34.2 4.6 32 7-39 10-42 (357)
451 3gvi_A Malate dehydrogenase; N 66.4 6 0.00021 35.1 4.6 29 7-36 8-37 (324)
452 1l7d_A Nicotinamide nucleotide 66.3 5.8 0.0002 35.7 4.6 30 7-37 173-202 (384)
453 1wly_A CAAR, 2-haloacrylate re 66.2 7.4 0.00025 33.8 5.1 30 8-38 148-178 (333)
454 3vtf_A UDP-glucose 6-dehydroge 66.1 5 0.00017 37.4 4.2 41 4-49 20-60 (444)
455 2v6g_A Progesterone 5-beta-red 66.1 5.2 0.00018 34.6 4.1 33 7-39 2-39 (364)
456 2x6t_A ADP-L-glycero-D-manno-h 66.1 5.9 0.0002 34.4 4.5 33 7-39 47-80 (357)
457 1smk_A Malate dehydrogenase, g 66.0 6 0.00021 34.9 4.5 32 5-36 7-40 (326)
458 1omo_A Alanine dehydrogenase; 65.8 7.1 0.00024 34.4 4.9 34 6-39 125-158 (322)
459 1y6j_A L-lactate dehydrogenase 65.8 5.8 0.0002 34.9 4.3 31 6-36 7-38 (318)
460 3p2y_A Alanine dehydrogenase/p 65.1 5 0.00017 36.7 3.9 30 7-37 185-214 (381)
461 2eez_A Alanine dehydrogenase; 64.8 6.7 0.00023 35.0 4.7 30 7-37 167-196 (369)
462 2q1s_A Putative nucleotide sug 64.7 6.9 0.00024 34.4 4.7 32 7-38 33-65 (377)
463 4a0s_A Octenoyl-COA reductase/ 64.4 23 0.00077 32.1 8.2 40 7-50 222-262 (447)
464 1pjq_A CYSG, siroheme synthase 64.1 25 0.00086 32.4 8.6 93 7-129 13-106 (457)
465 3ax6_A Phosphoribosylaminoimid 64.1 7.6 0.00026 34.3 4.8 31 7-38 2-32 (380)
466 3k5i_A Phosphoribosyl-aminoimi 64.1 5.8 0.0002 35.8 4.1 33 4-37 20-54 (403)
467 3iup_A Putative NADPH:quinone 63.9 8.4 0.00029 34.3 5.2 39 8-50 173-213 (379)
468 1gy8_A UDP-galactose 4-epimera 63.9 7.3 0.00025 34.2 4.7 32 7-39 3-36 (397)
469 2csu_A 457AA long hypothetical 63.5 22 0.00075 32.9 8.1 82 7-126 9-94 (457)
470 1cyd_A Carbonyl reductase; sho 63.4 9.6 0.00033 31.0 5.1 37 1-38 1-39 (244)
471 1qor_A Quinone oxidoreductase; 63.3 7 0.00024 33.8 4.4 30 7-37 142-172 (327)
472 4gx0_A TRKA domain protein; me 63.0 6.4 0.00022 37.0 4.4 31 7-38 349-379 (565)
473 2j8z_A Quinone oxidoreductase; 62.9 10 0.00035 33.3 5.5 29 8-37 165-194 (354)
474 4ffl_A PYLC; amino acid, biosy 62.7 8.4 0.00029 33.8 4.8 32 5-38 1-32 (363)
475 4hv4_A UDP-N-acetylmuramate--L 62.4 24 0.00082 32.8 8.2 83 7-121 23-106 (494)
476 4dio_A NAD(P) transhydrogenase 62.3 7.6 0.00026 35.7 4.6 31 7-39 191-221 (405)
477 2c0c_A Zinc binding alcohol de 62.0 6.9 0.00024 34.6 4.2 30 8-38 166-196 (362)
478 1r6d_A TDP-glucose-4,6-dehydra 61.6 9.1 0.00031 32.7 4.8 32 7-38 1-38 (337)
479 3pi7_A NADH oxidoreductase; gr 61.5 9.3 0.00032 33.4 4.9 30 8-38 167-197 (349)
480 2dwc_A PH0318, 433AA long hypo 61.4 9.6 0.00033 34.4 5.1 33 6-39 19-51 (433)
481 1kjq_A GART 2, phosphoribosylg 60.9 11 0.00039 33.1 5.4 32 6-38 11-42 (391)
482 2dzd_A Pyruvate carboxylase; b 60.8 5.3 0.00018 36.5 3.2 37 1-38 1-37 (461)
483 3fr7_A Putative ketol-acid red 60.4 7 0.00024 37.2 4.0 30 7-37 55-90 (525)
484 2p4h_X Vestitone reductase; NA 60.3 9.2 0.00031 32.4 4.5 30 7-37 2-32 (322)
485 1ez4_A Lactate dehydrogenase; 59.9 8.5 0.00029 33.9 4.3 33 7-39 6-38 (318)
486 2ggs_A 273AA long hypothetical 59.9 8 0.00027 31.9 4.0 30 8-39 2-32 (273)
487 2z04_A Phosphoribosylaminoimid 59.2 8.9 0.0003 33.6 4.4 31 7-38 2-32 (365)
488 3fbs_A Oxidoreductase; structu 59.0 12 0.00041 31.0 4.9 33 5-38 1-33 (297)
489 4f6c_A AUSA reductase domain p 58.7 10 0.00034 34.0 4.7 32 7-39 70-102 (427)
490 1o6z_A MDH, malate dehydrogena 58.7 11 0.00037 32.8 4.8 30 7-36 1-32 (303)
491 4gx0_A TRKA domain protein; me 58.5 8.7 0.0003 36.1 4.4 38 5-46 126-163 (565)
492 2hrz_A AGR_C_4963P, nucleoside 58.2 7.9 0.00027 33.2 3.8 32 7-38 15-53 (342)
493 1uay_A Type II 3-hydroxyacyl-C 58.2 9.1 0.00031 31.0 4.0 31 7-38 3-34 (242)
494 1yvv_A Amine oxidase, flavin-c 57.8 9.8 0.00034 32.3 4.3 33 5-38 1-33 (336)
495 1hye_A L-lactate/malate dehydr 57.8 11 0.00038 32.8 4.7 31 7-37 1-33 (313)
496 3gms_A Putative NADPH:quinone 57.8 6.7 0.00023 34.2 3.3 31 8-39 147-178 (340)
497 3f8d_A Thioredoxin reductase ( 57.7 15 0.00053 30.6 5.5 34 4-38 13-46 (323)
498 2zqz_A L-LDH, L-lactate dehydr 57.6 9.6 0.00033 33.7 4.3 34 6-39 9-42 (326)
499 3rft_A Uronate dehydrogenase; 57.2 8.2 0.00028 32.2 3.6 30 7-37 4-34 (267)
500 3lk7_A UDP-N-acetylmuramoylala 56.5 24 0.00082 32.2 7.0 90 7-127 10-101 (451)
No 1
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=1.1e-85 Score=598.65 Aligned_cols=241 Identities=46% Similarity=0.699 Sum_probs=233.9
Q ss_pred CCCceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 3 GDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 3 ~~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
++|++||||||||||||.++|++++++++|+|+|||+ .++++++|||||||+||+|+ ++++.+++ .|.+||++|+++
T Consensus 1 ~~m~~kv~INGfGrIGr~v~R~~~~~~~~~ivaind~-~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~ 77 (338)
T 3lvf_P 1 GSMAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL-TDDDMLAHLLKYDTMQGRFT-GEVEVVDG-GFRVNGKEVKSF 77 (338)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS-SCHHHHHHHHHCCTTTCCCS-SCEEEETT-EEEETTEEEEEE
T ss_pred CCccEEEEEECCCcHHHHHHHHHHHCCCceEEEEecC-CCHHHHHHHhccCCCCCCcC-CeEEEcCC-EEEECCEEEEEE
Confidence 4688999999999999999999999988999999995 99999999999999999999 99999998 699999999999
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-CCCeEEeecCccccCCCCCEEecCChhhhh
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAPMFVVGVNEKEYKPELDIVSNASCTTNC 161 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-d~p~iV~gVN~~~~~~~~~IIs~~sCtT~~ 161 (250)
+++||++++|++.|+|||+||||.|+++|+++.|+++||||||||+|++ |+||||||||++.|+++++|||||||||||
T Consensus 78 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~ 157 (338)
T 3lvf_P 78 SEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNS 157 (338)
T ss_dssp CCSCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHH
T ss_pred EecccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhh
Confidence 9999999999999999999999999999999999999999999999998 699999999999999778999999999999
Q ss_pred HHHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCC-CcccccccccccccCCCCCcchhhhhhhccccCCceeEEEE
Q 025639 162 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMK-DWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKI 240 (250)
Q Consensus 162 la~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~-d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~v 240 (250)
|+|++|+|||+|||++++||||||+|++|+++|+|+++ |||++|++++||||+++|++| +++||||+|+||++++|+
T Consensus 158 Lap~lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~NiIP~~tGaak--av~kVlPeL~gkltg~av 235 (338)
T 3lvf_P 158 LAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAK--AIGKVIPEIDGKLDGGAQ 235 (338)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCCEEEECSTTT--TGGGTCGGGTTSEEEEEE
T ss_pred hHHHHHHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceEEeCCCchHH--HHhhhchhhcCcEEEEEE
Confidence 99999999999999999999999999999999999866 999999999999999999999 999999999999999999
Q ss_pred eeceecccc
Q 025639 241 SIIPYLTGS 249 (250)
Q Consensus 241 r~VPv~~g~ 249 (250)
| |||++||
T Consensus 236 R-VPv~~~s 243 (338)
T 3lvf_P 236 R-VPVATGS 243 (338)
T ss_dssp E-ESCSSCE
T ss_pred E-cCCCceE
Confidence 9 9999997
No 2
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=9.3e-86 Score=598.38 Aligned_cols=238 Identities=59% Similarity=0.971 Sum_probs=232.8
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~ 86 (250)
+||||||||||||.++|++++++++|+|+|||++.++++++|||||||+||+|+ ++++.+++ .|.+||++|++++++|
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~d 79 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYA-GEVSHDDK-HIIVDGKKIATYQERD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCSS
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEEeecc
Confidence 799999999999999999999988999999999899999999999999999999 99999988 6999999999999999
Q ss_pred CCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEecCChhhhhHHHHH
Q 025639 87 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLA 166 (250)
Q Consensus 87 p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d~p~iV~gVN~~~~~~~~~IIs~~sCtT~~la~~l 166 (250)
|++++|++.|+|||+||||.|+++|+++.|+++||||||||+|++|+||||||||++.|+++++||||||||||||+|++
T Consensus 80 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~l 159 (332)
T 3pym_A 80 PANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLA 159 (332)
T ss_dssp GGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHH
T ss_pred cccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCCCCeEeeccchhhcCccccEEecCcchhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred HHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEEEeeceec
Q 025639 167 KVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKISIIPYL 246 (250)
Q Consensus 167 ~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~vr~VPv~ 246 (250)
|+|||+|||++++|||||++|++|+++|+|+++|||++|++++||||+++|++| +++||||+|+||++++|+| |||+
T Consensus 160 kvL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~NiIP~~tGaak--av~kVlPeL~gkltg~avR-VPv~ 236 (332)
T 3pym_A 160 KVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAK--AVGKVLPELQGKLTGMAFR-VPTV 236 (332)
T ss_dssp HHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCCEEEECSHHH--HHHHHSGGGTTSEEEEEEE-ESCS
T ss_pred HHHHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcccCCCCChHH--HHHHhhhhhcCCEEEEEEE-cCCC
Confidence 999999999999999999999999999998878999999999999999999999 9999999999999999999 9999
Q ss_pred ccc
Q 025639 247 TGS 249 (250)
Q Consensus 247 ~g~ 249 (250)
+||
T Consensus 237 ~~s 239 (332)
T 3pym_A 237 DVS 239 (332)
T ss_dssp SCE
T ss_pred CcE
Confidence 997
No 3
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=2.6e-85 Score=596.46 Aligned_cols=239 Identities=80% Similarity=1.238 Sum_probs=232.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCc-ceEEeCCeeeEECCEEEEEEecC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHN-ELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~-~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
+||||||||||||.++|++++++++|+|+|||++.++++++|||||||+||+|+ + +++.++++.|.+||++|++++++
T Consensus 4 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~~v~~~~~~~l~i~Gk~I~v~~e~ 82 (337)
T 3v1y_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWK-HSDIKIKDSKTLLLGEKPVTVFGIR 82 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCC-SSCEEEEETTEEEETTEEEEEECCS
T ss_pred eEEEEECCChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCccc-CceEEEcCCcEEEECCEEEEEEEec
Confidence 899999999999999999999988999999999999999999999999999999 8 99998762499999999999999
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEecCChhhhhHHHH
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPL 165 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d~p~iV~gVN~~~~~~~~~IIs~~sCtT~~la~~ 165 (250)
||++++|++.|+|||+||||.|+++|+++.|+++||||||||+|++|+||||||||++.|+++++||||||||||||+|+
T Consensus 83 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~ 162 (337)
T 3v1y_O 83 NPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPL 162 (337)
T ss_dssp SGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHH
T ss_pred CcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeECCCCCHHHcCCCCcEEecCchhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred HHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEEEeecee
Q 025639 166 AKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKISIIPY 245 (250)
Q Consensus 166 l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~vr~VPv 245 (250)
+|+|||+|||+++.|||||++|++|+++|+++++|||++|++++||||+++|++| +++||||+|+||++++|+| |||
T Consensus 163 lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~NiIP~~tGaak--av~kVlPeL~gkltg~avR-VPv 239 (337)
T 3v1y_O 163 AKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAK--AVGKVLPDLNGKLTGMSFR-VPT 239 (337)
T ss_dssp HHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCCEEEECCHHH--HHHHHSGGGTTSEEEEEEE-CSC
T ss_pred HHHHHHhcCeEEEEEeeeeeccchhhhccCCccccccccccccceeecCCCChHH--HHHHhccccCCcEEEEEEE-cCC
Confidence 9999999999999999999999999999998878999999999999999999999 9999999999999999999 999
Q ss_pred cccc
Q 025639 246 LTGS 249 (250)
Q Consensus 246 ~~g~ 249 (250)
++||
T Consensus 240 ~~~s 243 (337)
T 3v1y_O 240 VDVS 243 (337)
T ss_dssp SSCE
T ss_pred CCcE
Confidence 9997
No 4
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=1.1e-84 Score=591.91 Aligned_cols=238 Identities=43% Similarity=0.703 Sum_probs=231.4
Q ss_pred CceeEEEEcCChHHHHHHHHHHcC--CCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 5 KKIKIGINGFGRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~--~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
|++||||||||||||.++|+++++ +++|+|+|||+ .++++++|||||||+||+|+ ++++.+++ .|.+||++|+++
T Consensus 1 m~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~-~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~ 77 (335)
T 3doc_A 1 MAVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL-GPVETNAHLLRYDSVHGRFP-KEVEVAGD-TIDVGYGPIKVH 77 (335)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCCEECSS-EEESSSSEEEEE
T ss_pred CCEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC-CCHHHHHHHhcccCCCCCCC-CeEEEecC-EEEECCEEEEEE
Confidence 779999999999999999999987 67999999999 89999999999999999999 99999988 699999999999
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCC-CCeEEeecCccccCCCCCEEecCChhhhh
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-APMFVVGVNEKEYKPELDIVSNASCTTNC 161 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d-~p~iV~gVN~~~~~~~~~IIs~~sCtT~~ 161 (250)
+++||++++|++.|+|||+||||.|+++|+++.|+++||||||||+|++| +||||||||++.|+++++|||||||||||
T Consensus 78 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~ 157 (335)
T 3doc_A 78 AVRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNC 157 (335)
T ss_dssp CCSSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHH
T ss_pred eecccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhh
Confidence 99999999999999999999999999999999999999999999999987 79999999999999888999999999999
Q ss_pred HHHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEEEe
Q 025639 162 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKIS 241 (250)
Q Consensus 162 la~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~vr 241 (250)
|+|++|+|||+|||+++.|||||++|++|+++|+|+ +|||++|++++||||+++|++| +++||||+|+||++++|+|
T Consensus 158 Lap~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p~-kd~r~~r~aa~NiIP~~tGaak--av~kVlPeL~gkltg~avR 234 (335)
T 3doc_A 158 LAPVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMH-KDLYRARAAALSMIPTSTGAAK--AVGLVLPELKGKLDGVAIR 234 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTSSCEEEECCHHH--HHHHHSGGGTTCEEEEEEE
T ss_pred hHHhHHHHHHHcCEEEEEEEeeeeccchhhhhcCcc-ccccccccCcceEecCCCchHH--HHHHhccccCCCEEEEEEE
Confidence 999999999999999999999999999999999986 8999999999999999999999 9999999999999999999
Q ss_pred eceecccc
Q 025639 242 IIPYLTGS 249 (250)
Q Consensus 242 ~VPv~~g~ 249 (250)
|||++||
T Consensus 235 -VPv~~~s 241 (335)
T 3doc_A 235 -VPTPNVS 241 (335)
T ss_dssp -ESCSSCE
T ss_pred -ecccccc
Confidence 9999997
No 5
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=9e-85 Score=596.20 Aligned_cols=240 Identities=54% Similarity=0.874 Sum_probs=232.1
Q ss_pred CceeEEEEcCChHHHHHHHH----HHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEE--------eCCeee
Q 025639 5 KKIKIGINGFGRIGRLVARV----ALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKV--------KDEKTL 72 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~----l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~--------~~~~~l 72 (250)
|++||||||||||||.++|+ +++++++++|+|||++.++++++|||||||+||+|+ ++++. +++ .|
T Consensus 1 m~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~-~~v~~~~~~~~~~~~~-~l 78 (359)
T 3ids_C 1 MPIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFK-YEVTTTKSSPSVAKDD-TL 78 (359)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECS-SCEEEECSCTTSSSCC-EE
T ss_pred CceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEe-eEEEecccccccCCCC-EE
Confidence 77999999999999999999 777788999999998799999999999999999999 99999 776 69
Q ss_pred EECCEEEEEEe-cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-CCCeEEeecCccccCC-CC
Q 025639 73 LFGEKPVAVFG-FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAPMFVVGVNEKEYKP-EL 149 (250)
Q Consensus 73 ~~~g~~i~v~~-~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-d~p~iV~gVN~~~~~~-~~ 149 (250)
.+||++|++++ ++||++++|++.|+|||+||||.|+++|+++.|+++||||||||+|++ |+||||||||++.|++ ++
T Consensus 79 ~inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~ 158 (359)
T 3ids_C 79 VVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEH 158 (359)
T ss_dssp EETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTTC
T ss_pred EECCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCCC
Confidence 99999999998 899999999999999999999999999999999999999999999998 7999999999999997 78
Q ss_pred CEEecCChhhhhHHHHHHHH-HhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhc
Q 025639 150 DIVSNASCTTNCLAPLAKVI-HDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVI 228 (250)
Q Consensus 150 ~IIs~~sCtT~~la~~l~~L-~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvl 228 (250)
+||||||||||||+|++|+| ||+|||++++||||||+|++|+++|+|+++|||++|++++||||+++|++| +++|||
T Consensus 159 ~IISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaak--av~kVl 236 (359)
T 3ids_C 159 HVVSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAK--AVGMVI 236 (359)
T ss_dssp SEEECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCCEEEECSHHH--HHHHHS
T ss_pred CEEECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCcceeEccCCchHH--HHhhhc
Confidence 99999999999999999999 999999999999999999999999999878999999999999999999999 999999
Q ss_pred cccCCceeEEEEeeceecccc
Q 025639 229 IFYFFGLANSKISIIPYLTGS 249 (250)
Q Consensus 229 p~l~~ki~~~~vr~VPv~~g~ 249 (250)
|+|+||++++|+| |||++||
T Consensus 237 PeL~gkltg~avR-VPv~~vs 256 (359)
T 3ids_C 237 PSTQGKLTGMSFR-VPTPDVS 256 (359)
T ss_dssp GGGTTSEEEEEEE-ESCSSCE
T ss_pred hhhcCceEEEEEE-cCCCCcE
Confidence 9999999999999 9999997
No 6
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=3.2e-84 Score=589.86 Aligned_cols=237 Identities=43% Similarity=0.738 Sum_probs=218.2
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
++||||||||||||.++|++++++++|+|+|||+ .++++++|||||||+||+|+ ++++.+++ .|.+||++|++++++
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~-~d~~~~a~llkyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e~ 80 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKESAFEIVAINAS-YPSETLAHLIKYDTVHGKFD-GTVEAFED-HLLVDGKMIRLLNNR 80 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEECSS-EEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC-CCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEeecC
Confidence 4799999999999999999999988999999999 89999999999999999999 99999988 699999999999999
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-CCCeEEeecCccccCC-CCCEEecCChhhhhHH
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAPMFVVGVNEKEYKP-ELDIVSNASCTTNCLA 163 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-d~p~iV~gVN~~~~~~-~~~IIs~~sCtT~~la 163 (250)
||++++|++.|+|||+||||.|+++|+++.|+++||||||||+|++ |+||||||||++.|++ +++||||||||||||+
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~La 160 (345)
T 4dib_A 81 DPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLA 160 (345)
T ss_dssp CGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHH
T ss_pred ChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhH
Confidence 9999999999999999999999999999999999999999999998 5899999999999987 6899999999999999
Q ss_pred HHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEEEeec
Q 025639 164 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKISII 243 (250)
Q Consensus 164 ~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~vr~V 243 (250)
|++|+|||+|||++++|||||++|++|+++|+|+ +|||++|++++||||+++|++| +++||||+|+||++++|+| |
T Consensus 161 p~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaak--av~kVlPeL~gkltg~avR-V 236 (345)
T 4dib_A 161 PVVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPH-KDLRRARACGQSIIPTTTGAAK--ALAKVLPHLNGKLHGMALR-V 236 (345)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECC--------------CCTTSCTTTCCEEECCTHHH--HHHHHCGGGTTTEEEEEEE-C
T ss_pred HHHHHHHHhcCeEEEEEEeeeeccCCceeccccc-cccccchhhhhceecCCCchHH--HHhhhccccCCcEEEEEEE-c
Confidence 9999999999999999999999999999999987 8999999999999999999999 9999999999999999999 9
Q ss_pred eecccc
Q 025639 244 PYLTGS 249 (250)
Q Consensus 244 Pv~~g~ 249 (250)
||++||
T Consensus 237 Pv~~~s 242 (345)
T 4dib_A 237 PTPNVS 242 (345)
T ss_dssp CCSSEE
T ss_pred cCcccE
Confidence 999997
No 7
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=8.7e-84 Score=588.26 Aligned_cols=237 Identities=58% Similarity=0.974 Sum_probs=231.8
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~ 86 (250)
+||||||||||||.++|++++++ +++|+|||++.++++++|||||||+||+|+ ++++.+++ .|.+||++|++++++|
T Consensus 8 ~kvgInGFGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~d 84 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNG-QLVVDNHEISVYQCKE 84 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCSS
T ss_pred eEEEEECCChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCC-CcEEEcCC-EEEECCEEEEEEecCC
Confidence 79999999999999999999987 999999999899999999999999999999 99999998 6999999999999999
Q ss_pred CCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCCCCeEEeecCccccCC-CCCEEecCChhhhhHHHH
Q 025639 87 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKP-ELDIVSNASCTTNCLAPL 165 (250)
Q Consensus 87 p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d~p~iV~gVN~~~~~~-~~~IIs~~sCtT~~la~~ 165 (250)
|++++|++.|+||||||||.|+++|+++.|+++||||||||+||+|+||||||||++.|++ +++||||||||||||+|+
T Consensus 85 p~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~Lap~ 164 (346)
T 3h9e_O 85 PKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAPL 164 (346)
T ss_dssp GGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHHH
T ss_pred hhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999997 789999999999999999
Q ss_pred HHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEEEeecee
Q 025639 166 AKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKISIIPY 245 (250)
Q Consensus 166 l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~vr~VPv 245 (250)
+|+|||+|||+++.||||||+|++|+++|+|+++|||++|++++||||++||++| +++||||+|+||++++|+| |||
T Consensus 165 lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~NiIP~~tGaak--avgkViPeL~gkltg~avR-VPv 241 (346)
T 3h9e_O 165 AKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAK--AVTKVIPELKGKLTGMAFR-VPT 241 (346)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCCEEECCHHHH--HHHHHSGGGTTTEEEEEEE-ESC
T ss_pred HHHHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeeeecccCchHH--hhheechhhcCcEEEEEEE-ccc
Confidence 9999999999999999999999999999999878999999999999999999999 9999999999999999999 999
Q ss_pred cccc
Q 025639 246 LTGS 249 (250)
Q Consensus 246 ~~g~ 249 (250)
++||
T Consensus 242 ~~~s 245 (346)
T 3h9e_O 242 PDVS 245 (346)
T ss_dssp SSCE
T ss_pred ccce
Confidence 9997
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=2.9e-82 Score=579.04 Aligned_cols=237 Identities=45% Similarity=0.770 Sum_probs=229.2
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
|++||||||||||||.++|+++++ +||+|+|||+ .++++++|||||||+||+|+ ++++++++ .|.+||++|+++++
T Consensus 20 ~~~kVaInGfGrIGr~vlr~l~e~-~~~ivaIndl-~d~~~~a~llkydS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~~ 95 (356)
T 3hja_A 20 GSMKLAINGFGRIGRNVFKIAFER-GIDIVAINDL-TDPKTLAHLLKYDSTFGVYN-KKVESRDG-AIVVDGREIKIIAE 95 (356)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECC
T ss_pred CCeEEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC-CCHHHhhhhhccccCCCCCC-CCEEEcCC-EEEECCEEEEEEEc
Confidence 568999999999999999999999 6999999998 89999999999999999999 99999998 69999999999999
Q ss_pred CCCCCCCcccCCccEEEeecCCCCC----HHHHHHHHH-CCCCEEEEeCCCCC-CCeEEeecCccccCCCCCEEecCChh
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTD----KDKAAAHLK-GGAKKVVISAPSKD-APMFVVGVNEKEYKPELDIVSNASCT 158 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~----~~~a~~~~~-~Gak~vvis~~s~d-~p~iV~gVN~~~~~~~~~IIs~~sCt 158 (250)
+||+++||++.|+|||+||||.|++ +|+++.|++ +||||||||+|++| +||||||||++.|+++++||||||||
T Consensus 96 ~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSCT 175 (356)
T 3hja_A 96 RDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCT 175 (356)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCHH
T ss_pred CChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCccc
Confidence 9999999999999999999999999 999999999 99999999999986 79999999999999878999999999
Q ss_pred hhhHHHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEE
Q 025639 159 TNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANS 238 (250)
Q Consensus 159 T~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~ 238 (250)
||||+|++|+|||+|||++++|||||++|++|+++|+|+ +|||++|++++||||+++|++| +++||||+|++|++++
T Consensus 176 Tn~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaak--av~kVlPeL~gkltg~ 252 (356)
T 3hja_A 176 TNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPH-SDLRRARAAALSIIPTSTGAAK--AVGLVLPELKGKLNGT 252 (356)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTSCEEEECCTTT--THHHHCGGGTTTEEEE
T ss_pred hhhhhHhHHHHHHhcCeEEEEEEEEEecccccccccCcc-cccccccccccEEEcCCCchHH--HHHHhccccCCcEEEE
Confidence 999999999999999999999999999999999999987 8999999999999999999999 9999999999999999
Q ss_pred EEeeceecccc
Q 025639 239 KISIIPYLTGS 249 (250)
Q Consensus 239 ~vr~VPv~~g~ 249 (250)
|+| |||++||
T Consensus 253 avR-VPv~~~s 262 (356)
T 3hja_A 253 SMR-VPVPTGS 262 (356)
T ss_dssp EEE-ESCSSCE
T ss_pred EEE-cCCCccE
Confidence 999 9999997
No 9
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=4e-81 Score=571.87 Aligned_cols=241 Identities=58% Similarity=0.915 Sum_probs=230.9
Q ss_pred CC-ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 4 DK-KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 4 ~m-~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
|| ++||||||||||||+++|+++++++||||+|||++.++++++|||||||+||+|+ ++++++++ .|.++|++|+++
T Consensus 8 ~~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~-~~v~~~~~-~l~v~Gk~i~v~ 85 (345)
T 2b4r_O 8 HMAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFP-CEVTHADG-FLLIGEKKVSVF 85 (345)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEESSCEEEEE
T ss_pred chhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCC-CCEEEcCC-EEEECCEEEEEE
Confidence 36 5899999999999999999999999999999997699999999999999999999 89999988 699999999999
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCC-CCeEEeecCccccCCCCCEEecCChhhhh
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-APMFVVGVNEKEYKPELDIVSNASCTTNC 161 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d-~p~iV~gVN~~~~~~~~~IIs~~sCtT~~ 161 (250)
+++||++++|++.++||||||||.|+++|+++.|+++||||||||+|++| +||||||||++.|++.++|||||||||||
T Consensus 86 ~~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~ 165 (345)
T 2b4r_O 86 AEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNC 165 (345)
T ss_dssp CCSSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHH
T ss_pred EcCCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHH
Confidence 98899999999999999999999999999999999999999999999986 79999999999998767899999999999
Q ss_pred HHHHHHHHHhhcCeeEEEEEeeeccCCccccccCCC--CCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEE
Q 025639 162 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS--MKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSK 239 (250)
Q Consensus 162 la~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~--~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~ 239 (250)
|+|++|+|||+|||++++||||||+|++|+++|+++ ++|||++|++++||||+++|++| +++||||+|+||++++|
T Consensus 166 Lap~lk~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~NiIP~~tGaak--av~kVlP~L~gkltg~a 243 (345)
T 2b4r_O 166 LAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAK--AVGKVLPELNGKLTGVA 243 (345)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCCEEEECCHHH--HHHHHSGGGTTTEEEEE
T ss_pred HHHHHHHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhccCcCCCchHH--HHHHhhhhcCCcEEEEE
Confidence 999999999999999999999999999999999987 38999999999999999999999 99999999999999999
Q ss_pred Eeeceecccc
Q 025639 240 ISIIPYLTGS 249 (250)
Q Consensus 240 vr~VPv~~g~ 249 (250)
+| |||++||
T Consensus 244 vR-VPv~~gs 252 (345)
T 2b4r_O 244 FR-VPIGTVS 252 (345)
T ss_dssp EE-CSCSSCE
T ss_pred EE-ecccceE
Confidence 99 9999997
No 10
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=6.8e-81 Score=570.18 Aligned_cols=238 Identities=47% Similarity=0.827 Sum_probs=229.4
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
|++||||||||||||+++|+++++++||+|+|||+ .++++++|||||||+||+|+ ++++++++ .|.++|++|+++++
T Consensus 1 m~ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~-~~~~~~a~ll~yDs~hG~~~-~~v~~~~~-~l~v~Gk~i~v~~~ 77 (342)
T 2ep7_A 1 MAIKVGINGFGRIGRSFFRASWGREEIEIVAINDL-TDAKHLAHLLKYDSVHGIFK-GSVEAKDD-SIVVDGKEIKVFAQ 77 (342)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEECSS-EEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC-CChHHHhhhhhcccccccCC-CcEEEcCC-EEEECCEEEEEEEc
Confidence 56899999999999999999999989999999996 89999999999999999999 99999987 69999999999988
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCCCC-eEEeecCccccCC-CCCEEecCChhhhhH
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAP-MFVVGVNEKEYKP-ELDIVSNASCTTNCL 162 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d~p-~iV~gVN~~~~~~-~~~IIs~~sCtT~~l 162 (250)
+||++++|++.++||||||||.|+++|+++.|+++||||||||+|++|+| |||||||++.|++ .++||||||||||||
T Consensus 78 ~dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~L 157 (342)
T 2ep7_A 78 KDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCL 157 (342)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHH
T ss_pred CChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCCCceEEcCcCHHHhcccCCeEEECCChHHHHH
Confidence 99999999999999999999999999999999999999999999999999 9999999999997 578999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEEEee
Q 025639 163 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKISI 242 (250)
Q Consensus 163 a~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~vr~ 242 (250)
+|++|+|||+|||++++|||||++|++|+++|+|+ +|||++|++++||||+++|++| +++||||+|+||++++|+|
T Consensus 158 ap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p~-~d~r~~r~~a~NiIP~~tGaak--av~kVlP~L~gkltg~avR- 233 (342)
T 2ep7_A 158 APCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPH-KDFRRARAAAINIVPTTTGAAK--AIGEVIPELKGKLDGTARR- 233 (342)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCCTTG--GGGGTSGGGTTTEEEEEEE-
T ss_pred HHHHHHHHHHcCeeEEEEEEEeecccchhhhcCCc-chhhhhhhHhhCccCCCCChHH--HHHHhhhccCCCEEEEEEE-
Confidence 99999999999999999999999999999999985 8999999999999999999999 9999999999999999999
Q ss_pred ceecccc
Q 025639 243 IPYLTGS 249 (250)
Q Consensus 243 VPv~~g~ 249 (250)
|||++||
T Consensus 234 VPv~~~s 240 (342)
T 2ep7_A 234 VPVPDGS 240 (342)
T ss_dssp ESCSSCE
T ss_pred ecccceE
Confidence 9999997
No 11
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=3.7e-80 Score=564.28 Aligned_cols=236 Identities=42% Similarity=0.666 Sum_probs=228.9
Q ss_pred eeEEEEcCChHHHHHHHHHHcC---CCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEe
Q 025639 7 IKIGINGFGRIGRLVARVALQR---DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~---~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~ 83 (250)
+||||||||||||+++|+++++ ++||+|+|||+ .++++++|||||||+||+|+ ++++++++ .|.++|++|++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~-~~~~~~a~ll~ydS~hg~f~-~~v~~~~~-~l~v~g~~i~v~~ 78 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL-GDPKTNAHLTRYDTAHGKFP-GTVSVNGS-YMVVNGDKIRVDA 78 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC-CCHHHHHHHhccCCcCCCCC-CCEEEeCC-EEEECCEEEEEEE
Confidence 7999999999999999999998 78999999997 89999999999999999999 99999988 6999999999999
Q ss_pred cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-CCC-eEEeecCccccCCCCCEEecCChhhhh
Q 025639 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAP-MFVVGVNEKEYKPELDIVSNASCTTNC 161 (250)
Q Consensus 84 ~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-d~p-~iV~gVN~~~~~~~~~IIs~~sCtT~~ 161 (250)
++||++++|++.++||||||||.|+++++++.|+++||||||||+|++ |+| |||||||++.|++.++|||||||||||
T Consensus 79 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn~ 158 (335)
T 1obf_O 79 NRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTNC 158 (335)
T ss_dssp CSCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHH
T ss_pred cCCcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHHH
Confidence 999999999999999999999999999999999999999999999997 789 999999999998767899999999999
Q ss_pred HHHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEEEe
Q 025639 162 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKIS 241 (250)
Q Consensus 162 la~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~vr 241 (250)
|+|++|+|||+|||++++||||||+|++|+++|+++ +|||++|++++||||+++|++| +++||||+|+||++++|+|
T Consensus 159 Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~~-~d~r~~r~~a~NiIP~~tGaak--av~kVlP~L~gkltg~avR 235 (335)
T 1obf_O 159 LAPLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYH-EDLRRARSATMSMIPTKTGAAA--AVGDVLPELDGKLNGYAIR 235 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTTCCEEEECCHHH--HHHHHCGGGTTSEEEEEEE
T ss_pred HHHHHHHHHHhcCeeEEEEEEEchhhhhhhhhcccc-cccccccchhhccccCCCcchH--hHhhhccccCCceEEEEEE
Confidence 999999999999999999999999999999999986 8999999999999999999999 9999999999999999999
Q ss_pred eceecccc
Q 025639 242 IIPYLTGS 249 (250)
Q Consensus 242 ~VPv~~g~ 249 (250)
|||++||
T Consensus 236 -VPv~~~s 242 (335)
T 1obf_O 236 -VPTINVS 242 (335)
T ss_dssp -ESCSSCE
T ss_pred -eeccceE
Confidence 9999997
No 12
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=4.6e-73 Score=518.33 Aligned_cols=235 Identities=47% Similarity=0.746 Sum_probs=226.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~ 86 (250)
+||||||||+|||+++|+|+++ +||+++|||+ .++++++|||+|||+||+|. ++++++++ .|.++|+.|++++++|
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~-~~evvaind~-~~~~~~a~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR-GVEVALINDL-TDNKTLAHLLKYDSIYHRFP-GEVAYDDQ-YLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCEEEEEecC-CCHHHHhHhhhccccCCCCC-ceEEEcCC-EEEECCEEEEEEecCC
Confidence 4899999999999999999999 7999999997 89999999999999999999 99999887 6999999999998889
Q ss_pred CCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCC-CCeEEeecCccccCC-CCCEEecCChhhhhHHH
Q 025639 87 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-APMFVVGVNEKEYKP-ELDIVSNASCTTNCLAP 164 (250)
Q Consensus 87 p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d-~p~iV~gVN~~~~~~-~~~IIs~~sCtT~~la~ 164 (250)
|++++|++.++|+||||||.|.++++++.|+++||||||||+|++| +|++|||||++.|++ +++||||||||||||+|
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap 156 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAP 156 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999987 799999999999996 47899999999999999
Q ss_pred HHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEEEeece
Q 025639 165 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKISIIP 244 (250)
Q Consensus 165 ~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~vr~VP 244 (250)
++||||++|||+++.|||||++||+|+++|+++ +|||++|++++||||+++|++| +++||||+|+||++++|+| ||
T Consensus 157 ~lk~L~~~fgI~~~~mtTvha~Tg~q~~~d~~~-~d~r~~r~~a~NiIP~~tGaak--av~kIlp~L~gkl~g~a~R-VP 232 (331)
T 2g82_O 157 VMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPH-KDLRRARAAAINIIPTTTGAAK--ATALVLPSLKGRFDGMALR-VP 232 (331)
T ss_dssp HHHHHHHHTCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCCHHH--HHTTTCGGGTTSEEEEEEE-ES
T ss_pred HHHHHHHhcCccEEEEEEEeecccccchhcccc-ccccccchhhhCccccCCCchh--hhhhhHHhcCCCEEEEEEE-eC
Confidence 999999999999999999999999999999886 8999999999999999999999 9999999999999999999 99
Q ss_pred ecccc
Q 025639 245 YLTGS 249 (250)
Q Consensus 245 v~~g~ 249 (250)
|++||
T Consensus 233 v~~gs 237 (331)
T 2g82_O 233 TATGS 237 (331)
T ss_dssp CSSCE
T ss_pred CCCEE
Confidence 99997
No 13
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=9.3e-72 Score=516.74 Aligned_cols=238 Identities=42% Similarity=0.709 Sum_probs=228.9
Q ss_pred CceeEEEEcCChHHHHHHHHHHcC--CCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 5 KKIKIGINGFGRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~--~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
|++||||||||+|||.++|+|.++ ++||||+||++ .++++++|||+|||+||+|. ++++++++ .|.++|+.+.++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~-~d~~~~a~ll~yds~~G~~~-~~v~~~~~-~l~v~g~~i~v~ 77 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIV 77 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEE
T ss_pred CCcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC-CCHHHHHHhhcccccCCCCC-CcEEEeCC-eEEECCeEEEEE
Confidence 568999999999999999999998 89999999997 89999999999999999999 99999888 699999999999
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCC-CC-eEEeecCccccCC-CCCEEecCChhh
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-AP-MFVVGVNEKEYKP-ELDIVSNASCTT 159 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d-~p-~iV~gVN~~~~~~-~~~IIs~~sCtT 159 (250)
+++||++++|++.++|+||||||.|.++++++.|+++||||||||+|++| +| ++|||||++.|++ +++|||||||||
T Consensus 78 ~~~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtT 157 (380)
T 2d2i_A 78 CDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTT 157 (380)
T ss_dssp CCSCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHH
T ss_pred ecCChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHH
Confidence 99999999998889999999999999999999999999999999999987 78 9999999999997 478999999999
Q ss_pred hhHHHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEE
Q 025639 160 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSK 239 (250)
Q Consensus 160 ~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~ 239 (250)
|||+|++||||++|||+++.|||||++|++|+++|+++ ++||++|++++||||++||+++ +++|+||+|++|++++|
T Consensus 158 n~lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~~-~d~r~gR~aa~NiIP~~Tgaak--av~kvlPeL~gkl~g~a 234 (380)
T 2d2i_A 158 NCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPTTTGAAK--AVALVIPELKGKLNGIA 234 (380)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCGGGCCEEEECCHHH--HHHHHCGGGTTTEEEEE
T ss_pred HHHHHHHHHHHHhcCeeEEEEEEEeeccccchhhccch-hhhhhcchHhhCeEeccCchHH--HHHhhhHhhhCcEEEEE
Confidence 99999999999999999999999999999999999987 7999999999999999999999 99999999999999999
Q ss_pred Eeeceecccc
Q 025639 240 ISIIPYLTGS 249 (250)
Q Consensus 240 vr~VPv~~g~ 249 (250)
+| ||+++||
T Consensus 235 vR-VPt~~gs 243 (380)
T 2d2i_A 235 LR-VPTPNVS 243 (380)
T ss_dssp EE-ESCSSCE
T ss_pred EE-eccCCEE
Confidence 99 9999997
No 14
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=1.7e-70 Score=503.20 Aligned_cols=238 Identities=42% Similarity=0.710 Sum_probs=228.9
Q ss_pred CceeEEEEcCChHHHHHHHHHHcC--CCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 5 KKIKIGINGFGRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~--~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
|++||||||||+|||.++|+|+++ |+||+|+||+. .++++++|||+|||+||+|. ++++++++ .|.++|+.+.++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~-~~~~~~~~l~~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~ 77 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIV 77 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEE
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC-CCHHHHHHHhccccccCCCC-CcEEEcCC-eeeecCceEEEE
Confidence 568999999999999999999999 89999999997 89999999999999999999 99999887 699999999999
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCC-CC-eEEeecCccccCC-CCCEEecCChhh
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-AP-MFVVGVNEKEYKP-ELDIVSNASCTT 159 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d-~p-~iV~gVN~~~~~~-~~~IIs~~sCtT 159 (250)
+++||++++|++.++|+||||||.|.++++++.|+++||||||||+|++| +| ++|||||++.|++ .++|||||||||
T Consensus 78 ~~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtT 157 (339)
T 3b1j_A 78 CDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTT 157 (339)
T ss_dssp CCSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHH
T ss_pred ecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchh
Confidence 99999999999889999999999999999999999999999999999886 78 9999999999987 478999999999
Q ss_pred hhHHHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEE
Q 025639 160 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSK 239 (250)
Q Consensus 160 ~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~ 239 (250)
|||+|++||||++|||+++.|||||++|++|+++|+++ +|||++|++++||||++||+++ +++||+|+|++|++++|
T Consensus 158 n~lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~~-~d~r~~r~a~~NiiP~~tgaak--av~kVlpeL~gkl~g~a 234 (339)
T 3b1j_A 158 NCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPTTTGAAK--AVALVIPELKGKLNGIA 234 (339)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCTTSCCEEEECSHHH--HHHHHCGGGTTTEEEEE
T ss_pred hHHHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccch-hhhhccccHHHceEcccCchHH--HHHHHhHhhcCcEEEEE
Confidence 99999999999999999999999999999999999987 7999999999999999999999 99999999999999999
Q ss_pred Eeeceecccc
Q 025639 240 ISIIPYLTGS 249 (250)
Q Consensus 240 vr~VPv~~g~ 249 (250)
+| ||+++||
T Consensus 235 ~r-VP~~~g~ 243 (339)
T 3b1j_A 235 LR-VPTPNVS 243 (339)
T ss_dssp EE-ESCSSCE
T ss_pred EE-eccCCEE
Confidence 99 9999997
No 15
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=3e-70 Score=500.59 Aligned_cols=236 Identities=44% Similarity=0.717 Sum_probs=226.3
Q ss_pred eeEEEEcCChHHHHHHHHHHcC--CCceEEEeeCCCCChhHHhhhhccccccccCCCcceE-EeCCeeeEECCEEEEEEe
Q 025639 7 IKIGINGFGRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELK-VKDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~--~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~-~~~~~~l~~~g~~i~v~~ 83 (250)
+||||||||+|||+++|+|+++ |++||++|||+ .++++++|||+|||+||+|. +++. ++++ .|.++|+.+.+++
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~-~~~~~~a~ll~sds~~G~~~-~~v~~~~~~-~l~v~g~~i~v~~ 78 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT-GGVKQASHLLKYDSILGTFD-ADVKTAGDS-AISVDGKVIKVVS 78 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT-TCHHHHHHHHHCCTTTCSCS-SCEEECTTS-EEEETTEEEEEEC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC-CCHHHHHHHhcccccCCCcc-ceeEEecCC-eEEECCeEEEEEe
Confidence 7999999999999999999999 89999999996 89999999999999999999 8998 5666 5999999999999
Q ss_pred cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCC-CCeEEeecCccccCCCCCEEecCChhhhhH
Q 025639 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-APMFVVGVNEKEYKPELDIVSNASCTTNCL 162 (250)
Q Consensus 84 ~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d-~p~iV~gVN~~~~~~~~~IIs~~sCtT~~l 162 (250)
++||++++|++.++|+||||||.|.++++++.|+++|||+|++|+|+.| +|++|||||++.|++.++||||||||||||
T Consensus 79 ~~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~l 158 (337)
T 1rm4_O 79 DRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCL 158 (337)
T ss_dssp CSCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHHH
T ss_pred cCChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHHH
Confidence 9999999998889999999999999999999999999999999999876 799999999999986678999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEEEee
Q 025639 163 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKISI 242 (250)
Q Consensus 163 a~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~vr~ 242 (250)
+|++|+||++|||+++.|||||++|++|++.|+++ +|||++|++++||||+++|+++ +++|+||+|++|++++|+|
T Consensus 159 ap~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~~-~~~r~~r~~a~NiiP~~tgaak--av~kvlPel~gkl~~~a~R- 234 (337)
T 1rm4_O 159 APFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH-RDLRRARAACLNIVPTSTGAAK--AVALVLPNLKGKLNGIALR- 234 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCTTTCCEEECCCHHH--HHHHHCGGGTTTEEEEEEE-
T ss_pred HHHHHHHHHhcCeeEEEEEEEEecCCccchhhcch-hhhccchhhhcCcccccchhhH--HHHhhhhhhcCcEEEEEEE-
Confidence 99999999999999999999999999999999986 8999999999999999999998 9999999999999999999
Q ss_pred ceecccc
Q 025639 243 IPYLTGS 249 (250)
Q Consensus 243 VPv~~g~ 249 (250)
||+++||
T Consensus 235 VP~~~gs 241 (337)
T 1rm4_O 235 VPTPNVS 241 (337)
T ss_dssp ESCSSCE
T ss_pred ecCCCEE
Confidence 9999997
No 16
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=5.6e-70 Score=498.78 Aligned_cols=236 Identities=50% Similarity=0.779 Sum_probs=227.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~ 86 (250)
+||||||||+|||+++|+|.++|++|+++||+. .++++++|||+|||+||+|. ++++++++ .|.++|+.+++++++|
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~-~~~~~~~~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 78 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL-TDANTLAHLLKYDSVHGRLD-AEVSVNGN-NLVVNGKEIIVKAERD 78 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECCSS
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC-CCHHHHHHHhccCCcCCCcC-ceEEEccC-cEEECCEEEEEEecCC
Confidence 799999999999999999999999999999996 89999999999999999999 89999988 6999999999998889
Q ss_pred CCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCC-CCeEEeecCccccCC-CCCEEecCChhhhhHHH
Q 025639 87 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-APMFVVGVNEKEYKP-ELDIVSNASCTTNCLAP 164 (250)
Q Consensus 87 p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d-~p~iV~gVN~~~~~~-~~~IIs~~sCtT~~la~ 164 (250)
|++++|++.++|+||||||.|.++++++.|+++||||||||+|++| +|++|||||++.|++ .++||||||||||||+|
T Consensus 79 p~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~lap 158 (334)
T 3cmc_O 79 PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAP 158 (334)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHHH
Confidence 9999999889999999999999999999999999999999999887 799999999999986 37899999999999999
Q ss_pred HHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEEEeece
Q 025639 165 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKISIIP 244 (250)
Q Consensus 165 ~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~vr~VP 244 (250)
+|+||+++|||+++.|||||++||+|+++|+++ ++||++|++++||||+++|+++ |++|+||+|+||++++|+| ||
T Consensus 159 ~lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~~-~~~r~~r~~a~NiiP~~tg~a~--ei~kvlp~l~gkl~~~a~r-VP 234 (334)
T 3cmc_O 159 FAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPH-KDLRRARAAAESIIPTTTGAAK--AVALVLPELKGKLNGMAMR-VP 234 (334)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTCCEEEECSHHH--HHHHHCGGGTTTEEEEEEE-ES
T ss_pred HHHHHHHhcCceeeeEEEEEeccchhhhccccc-cccccchhhhhCEEeeccCccc--chhhhChhhcCcEEEEEEE-EC
Confidence 999999999999999999999999999999986 8999999999999999999999 9999999999999999999 99
Q ss_pred ecccc
Q 025639 245 YLTGS 249 (250)
Q Consensus 245 v~~g~ 249 (250)
+++||
T Consensus 235 ~~~gs 239 (334)
T 3cmc_O 235 TPNVS 239 (334)
T ss_dssp CSSCE
T ss_pred CCCEE
Confidence 99997
No 17
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=6e-69 Score=491.61 Aligned_cols=236 Identities=47% Similarity=0.784 Sum_probs=227.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcC--CCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 7 IKIGINGFGRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~--~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
+||||||||+|||+++|+|.+| |+|||++||+. .++++++|||+|||+||+|. ++++++++ .|.++|+.++++++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~ 77 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL-TDTKTLAHLLKYDSVHKKFP-GKVEYTEN-SLIVDGKEIKVFAE 77 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS-SCHHHHHHHHHCCTTTCCCS-SCEEECSS-EEEETTEEEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC-CChHHhhhhccCcCcCCCcC-CcEEEcCC-EEEECCeEEEEEec
Confidence 5899999999999999999998 99999999996 89999999999999999999 89999887 69999999999988
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCCCC-eEEeecCccccCCCCCEEecCChhhhhHH
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAP-MFVVGVNEKEYKPELDIVSNASCTTNCLA 163 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d~p-~iV~gVN~~~~~~~~~IIs~~sCtT~~la 163 (250)
+||++++|++.++|+||||||.|.++++++.|+++||||||||+|++|+| ++|||||++.|+++++||||||||||||+
T Consensus 78 ~dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~la 157 (332)
T 1hdg_O 78 PDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIA 157 (332)
T ss_dssp SSGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred CChHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCCCCCceEEeccCHHHhCCCCcEEECCccHHHHHH
Confidence 89999999988999999999999999999999999999999999998899 99999999999865789999999999999
Q ss_pred HHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEEEeec
Q 025639 164 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKISII 243 (250)
Q Consensus 164 ~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~vr~V 243 (250)
|+|+||+++|||+++.|||||++||+|+++|+++ ++||++|++++||||+++|+++ |++|+||+|+||++++|+| |
T Consensus 158 p~lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~~-~~~~~~r~~a~NiiP~~tg~a~--ei~kvLp~l~gkl~~~a~r-V 233 (332)
T 1hdg_O 158 PIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPH-KDLRRARAAAVNIIPTTTGAAK--AVALVVPEVKGKLDGMAIR-V 233 (332)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCTHHH--HHHHHCGGGTTTEEEEEEE-E
T ss_pred HHHHHHHHhcCeeEeEEEEEEeccchhhhhcCcc-cccccchhHhhCcccccCCccc--chhhhCccccCCEEEEeEE-c
Confidence 9999999999999999999999999999999986 7999999999999999999999 9999999999999999999 9
Q ss_pred eecccc
Q 025639 244 PYLTGS 249 (250)
Q Consensus 244 Pv~~g~ 249 (250)
|+++||
T Consensus 234 P~~~g~ 239 (332)
T 1hdg_O 234 PTPDGS 239 (332)
T ss_dssp SCSSCE
T ss_pred cccCcE
Confidence 999997
No 18
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=7e-69 Score=494.24 Aligned_cols=240 Identities=60% Similarity=0.980 Sum_probs=226.1
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
+++||||||||+|||+++|+|+++|+||||+||++..++++++|||+|||+||+|. +.++++++ .|.+||+.++++++
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~-~~v~~~~~-~l~v~g~~i~v~~~ 93 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFN-GTVEVSGK-DLCINGKVVKVFQA 93 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCS-SCEEECC--CEEETTEEEEEECC
T ss_pred cceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCC-CcEEEeCC-EEEECCeEEEEEec
Confidence 35799999999999999999999999999999995589999999999999999999 99999887 69999999999988
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCC-CCeEEeecCccccCCC-CCEEecCChhhhhH
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-APMFVVGVNEKEYKPE-LDIVSNASCTTNCL 162 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d-~p~iV~gVN~~~~~~~-~~IIs~~sCtT~~l 162 (250)
+||++++|++.++|+||||||.|.++++++.|+++||||||||+|++| +|++|||||++.|++. .+||||||||||||
T Consensus 94 ~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~l 173 (354)
T 3cps_A 94 KDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCL 173 (354)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHHH
T ss_pred CChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHHH
Confidence 899999998789999999999999999999999999999999999876 7999999999999863 78999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCC--CCcccccccccccccCCCCCcchhhhhhhccccCCceeEEEE
Q 025639 163 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSM--KDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKI 240 (250)
Q Consensus 163 a~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~--~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~v 240 (250)
+|+|+||+++|||+++.|||||++|++|+++|+++. ++||++|++++||||+++|+++ |++|+||+|++|++++|+
T Consensus 174 ap~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~~tG~ak--ei~kvlp~l~gkl~~~a~ 251 (354)
T 3cps_A 174 APLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAK--AVGKVIPALNGKLTGMAI 251 (354)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEEECCHHH--HHHHHSGGGTTTEEEEEE
T ss_pred HHHHHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEecCcCHHH--HHHHHHHhcCCcEEEEEE
Confidence 999999999999999999999999999999999862 6899999999999999999999 999999999999999999
Q ss_pred eeceecccc
Q 025639 241 SIIPYLTGS 249 (250)
Q Consensus 241 r~VPv~~g~ 249 (250)
| ||+++||
T Consensus 252 r-VP~~~gs 259 (354)
T 3cps_A 252 R-VPTPDVS 259 (354)
T ss_dssp E-ESCSSCE
T ss_pred E-eccCCEE
Confidence 9 9999997
No 19
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=1.7e-68 Score=489.96 Aligned_cols=238 Identities=35% Similarity=0.632 Sum_probs=217.3
Q ss_pred CceeEEEEcCChHHHHHHHHHHc---CCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEE
Q 025639 5 KKIKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~---~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v 81 (250)
|++||||||||+|||.++|+|.+ +|+||+++||+. .++++++|||+|||+||+|. ++++++++ .|.++|+.+++
T Consensus 1 M~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v 77 (339)
T 2x5j_O 1 MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL-ADAAGMAHLLKYDTSHGRFA-WEVRQERD-QLFVGDDAIRV 77 (339)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEE
T ss_pred CCeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC-CCHHHHHHHhcccccCCCCC-ceEEEcCC-eeEECCEEEEE
Confidence 56899999999999999999999 889999999997 89999999999999999999 99999888 69999999999
Q ss_pred EecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC-CCCC-eEEeecCccccCCCCCEEecCChhh
Q 025639 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS-KDAP-MFVVGVNEKEYKPELDIVSNASCTT 159 (250)
Q Consensus 82 ~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s-~d~p-~iV~gVN~~~~~~~~~IIs~~sCtT 159 (250)
++++||++++|++.++|+||||||.|.++++++.|+++|+||||||+|+ .|+| ++|||||++.|+++.+|||||||||
T Consensus 78 ~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCtt 157 (339)
T 2x5j_O 78 LHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTT 157 (339)
T ss_dssp ECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHH
T ss_pred EecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHH
Confidence 9888999999988899999999999999999999999999999999998 6788 9999999999986568999999999
Q ss_pred hhHHHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEE
Q 025639 160 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSK 239 (250)
Q Consensus 160 ~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~ 239 (250)
|||+|+|+||+++|||+++.|||+|++|++|+++|+++ +|||++|++++||||+++|+++ |++|+||+|++|++++|
T Consensus 158 n~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~~-~d~r~~r~a~~NiiP~~tg~a~--ei~kvlp~l~gkl~~~a 234 (339)
T 2x5j_O 158 NCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYH-PDLRRTRAASQSIIPVDTKLAA--GITRFFPQFNDRFEAIA 234 (339)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEECCC------------CTTTTSCCCCCCEEECCCHHH--HHHHHSGGGTTSEEEEE
T ss_pred HHHHHHHHHHHHccCcceeeEEEEEecccccccccccc-ccccchhhHHhCcccccCChHH--HHHHHHHHhcCcEEEEE
Confidence 99999999999999999999999999999999999987 7899999999999999999999 99999999999999999
Q ss_pred Eeeceecccc
Q 025639 240 ISIIPYLTGS 249 (250)
Q Consensus 240 vr~VPv~~g~ 249 (250)
+| ||+++||
T Consensus 235 ~r-VP~~~g~ 243 (339)
T 2x5j_O 235 VR-VPTINVT 243 (339)
T ss_dssp EE-CSSCSCE
T ss_pred EE-ecccCcE
Confidence 99 9999997
No 20
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=4.5e-68 Score=485.57 Aligned_cols=236 Identities=57% Similarity=0.915 Sum_probs=227.6
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~ 86 (250)
+||||||||+|||+++|+|.++|++||++||+. .++++++|||+|||+||+|. ++++++++ .|.+||+.|++++++|
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~-~~~~~~a~l~~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYMAYMLKYDSTHGRFD-GTVEVKDG-HLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC-CChhHHhHhhcccccCCCCC-CeEEEcCC-EEEECCEEEEEEEcCC
Confidence 799999999999999999999999999999996 89999999999999999999 99999888 6999999999999889
Q ss_pred CCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-CCCeEEeecCccccCCCCCEEecCChhhhhHHHH
Q 025639 87 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPL 165 (250)
Q Consensus 87 p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-d~p~iV~gVN~~~~~~~~~IIs~~sCtT~~la~~ 165 (250)
|++++|++.++|+||||||.|.++++++.|+++|+|+|++|+|++ |+|++|||||++.|+ .++||||||||||||+|+
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap~ 157 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAPL 157 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHHH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHHH
Confidence 999999888999999999999999999999999999999999986 479999999999998 688999999999999999
Q ss_pred HHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEEEeecee
Q 025639 166 AKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKISIIPY 245 (250)
Q Consensus 166 l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~vr~VPv 245 (250)
|+||+++|||+++.|||+|++|++|+++|++++++||++|++++||||+++|+++ |++|+||+|+||++++|+| ||+
T Consensus 158 lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~--ei~kvlpel~gkl~~~a~r-VP~ 234 (330)
T 1gad_O 158 AKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAK--AVGKVLPELNGKLTGMAFR-VPT 234 (330)
T ss_dssp HHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEEECCTTT--THHHHSGGGTTSEEEEEEE-CSC
T ss_pred HHHHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEcCCCcch--hHHHHHHHhcCcEEEEEEE-ecc
Confidence 9999999999999999999999999999999778999999999999999999999 9999999999999999999 999
Q ss_pred cccc
Q 025639 246 LTGS 249 (250)
Q Consensus 246 ~~g~ 249 (250)
++||
T Consensus 235 ~~g~ 238 (330)
T 1gad_O 235 PNVS 238 (330)
T ss_dssp SSCE
T ss_pred ccEE
Confidence 9997
No 21
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=1.1e-67 Score=484.45 Aligned_cols=241 Identities=79% Similarity=1.226 Sum_probs=227.5
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEE-eCCeeeEECCEEEEEEe
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKV-KDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~-~~~~~l~~~g~~i~v~~ 83 (250)
|++||||||||+|||.++|+|.++|++||++|||+..++++++|||||||+||+|.++.+++ +++ .|.++|+.+.+++
T Consensus 2 m~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~-~l~~~g~~i~v~~ 80 (337)
T 3e5r_O 2 GKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSK-TLLLGEKPVTVFG 80 (337)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSS-EEEETTEEEEEEC
T ss_pred CceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCC-eeEECCeEEEEEe
Confidence 45899999999999999999999999999999996579999999999999999986235666 666 6999999999998
Q ss_pred cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEecCChhhhhHH
Q 025639 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLA 163 (250)
Q Consensus 84 ~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d~p~iV~gVN~~~~~~~~~IIs~~sCtT~~la 163 (250)
++||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++|+|++|||||++.|++.++||||||||||||+
T Consensus 81 ~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~d~p~~V~gvN~~~~~~~~~iIsnpsCtt~~la 160 (337)
T 3e5r_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLA 160 (337)
T ss_dssp CSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred cCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCCCCCEEEeccCHHHhCCCCcEEECCChHHHHHH
Confidence 88999999988899999999999999999999999999999999999889999999999999865789999999999999
Q ss_pred HHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEEEeec
Q 025639 164 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKISII 243 (250)
Q Consensus 164 ~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~vr~V 243 (250)
|+|+||+++|||+++.|||+|++|++|+++|+++.++||++|++++||||+++|+++ |++|+||+|++|++++|+| |
T Consensus 161 ~~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~--ei~kvlpel~gkl~~~a~r-V 237 (337)
T 3e5r_O 161 PLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAK--AVGKVLPDLNGKLTGMSFR-V 237 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEEECCHHH--HHHHHSGGGTTTEEEEEEE-E
T ss_pred HHHHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCccccCCCchH--HHHHHHHHhCCcEEEEEEE-e
Confidence 999999999999999999999999999999998767999999999999999999999 9999999999999999999 9
Q ss_pred eecccc
Q 025639 244 PYLTGS 249 (250)
Q Consensus 244 Pv~~g~ 249 (250)
|+++||
T Consensus 238 P~~~g~ 243 (337)
T 3e5r_O 238 PTVDVS 243 (337)
T ss_dssp SCSSCE
T ss_pred ccCCeE
Confidence 999997
No 22
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=1.3e-67 Score=483.75 Aligned_cols=240 Identities=61% Similarity=0.994 Sum_probs=229.0
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
|++||||||||+|||.++|+|.+++++||++|||++.++++++||++|||+||+|. ++++++++ .|.++|+.++++++
T Consensus 2 M~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~-~~~~~~~~-~l~v~g~~i~v~~~ 79 (335)
T 1u8f_O 2 GKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFH-GTVKAENG-KLVINGNPITIFQE 79 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECC
T ss_pred CceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCC-CceEEcCC-eEEECCeEEEEEec
Confidence 45799999999999999999999999999999995579999999999999999999 99999888 69999999999988
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEecCChhhhhHHH
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAP 164 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d~p~iV~gVN~~~~~~~~~IIs~~sCtT~~la~ 164 (250)
+||++++|++.++|+||||||.|.+++.++.|+++|+|+|++|+|++|+|++|||||++.|++.++||||||||||||+|
T Consensus 80 ~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l~~ 159 (335)
T 1u8f_O 80 RDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAP 159 (335)
T ss_dssp SSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSSSCBCCTTTTGGGCCTTCSEEECCCHHHHHHHH
T ss_pred CCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCCCCCeEEeccCHHHhCCCCCEEECCChHHHHHHH
Confidence 89999999888999999999999999999999999999999999988899999999999998657899999999999999
Q ss_pred HHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCCcchhhhhhhccccCCceeEEEEeece
Q 025639 165 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKVHSVGRVIIFYFFGLANSKISIIP 244 (250)
Q Consensus 165 ~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~~k~~~~~kvlp~l~~ki~~~~vr~VP 244 (250)
+|+||+++|||+++.|||+|++||+|+++|++++++||++|++++||||+++|+++ |++|+||+|++|++++|+| ||
T Consensus 160 ~lkpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~--ei~kvlpel~gkl~~~a~r-VP 236 (335)
T 1u8f_O 160 LAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAK--AVGKVIPELNGKLTGMAFR-VP 236 (335)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEEECCTTT--THHHHSGGGTTSEEEEEEE-ES
T ss_pred HHHHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceeccCChhH--HHHHHHHHhCCcEEEEEEE-ec
Confidence 99999999999999999999999999999998657999999999999999999999 9999999999999999999 99
Q ss_pred ecccc
Q 025639 245 YLTGS 249 (250)
Q Consensus 245 v~~g~ 249 (250)
+++||
T Consensus 237 ~~~g~ 241 (335)
T 1u8f_O 237 TANVS 241 (335)
T ss_dssp CSSCE
T ss_pred cCCEE
Confidence 99997
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=3.9e-56 Score=408.74 Aligned_cols=213 Identities=18% Similarity=0.187 Sum_probs=189.5
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccc--cccccC--CCcce-EEeCCeeeEECCEEE
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYD--SVHGQW--KHNEL-KVKDEKTLLFGEKPV 79 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~yd--S~~G~~--~~~~v-~~~~~~~l~~~g~~i 79 (250)
|++||||||||+|||.++|+|.++++|+|++|||. ++++++||++|| |+||+| . +.+ +++++ .+.++|
T Consensus 1 MmikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~--~~~~~~~l~~~dg~s~~g~~~~~-~~v~~~~~~-~l~v~~--- 73 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT--KPDFEARLAVEKGYKLFVAIPDN-ERVKLFEDA-GIPVEG--- 73 (343)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSCCH-HHHHHHHHT-TCCCCC---
T ss_pred CceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC--CHHHHHHHHHhcCCccccccCCC-ceeecccCC-eEEECC---
Confidence 55899999999999999999999989999999997 599999999999 999999 5 455 45555 476665
Q ss_pred EEEecCCCCCCCcccCCccEEEeecCCCCCHHHHH-HHHHCCCCEEEEeCCCC-C-CC-eEEeecCccccCCCCCEEecC
Q 025639 80 AVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAA-AHLKGGAKKVVISAPSK-D-AP-MFVVGVNEKEYKPELDIVSNA 155 (250)
Q Consensus 80 ~v~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~-~~~~~Gak~vvis~~s~-d-~p-~iV~gVN~~~~~~~~~IIs~~ 155 (250)
+++++.| ++|+||||||.+.+.++++ .|+++|+ +||+|+|.. | +| +||||||+++|+. ++|||||
T Consensus 74 ------~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG~-~VI~sap~~~d~vp~~vV~gvN~~~~~~-~~iIsn~ 142 (343)
T 2yyy_A 74 ------TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHKV-KAILQGGEKAKDVEDNFNALWSYNRCYG-KDYVRVV 142 (343)
T ss_dssp ------BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTTC-EEEECTTSCGGGSSEEECTTTTHHHHTT-CSEEEEC
T ss_pred ------chHHhcc---CCCEEEECCCccccHHHHHHHHHHCCC-EEEECCCccccCCCceEEcccCHHHhcc-CCEEecc
Confidence 3444556 7999999999999999996 9999994 688888876 5 79 9999999999985 7899999
Q ss_pred ChhhhhHHHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccC----CCCCcchhhhhhhcccc
Q 025639 156 SCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPS----STGAAKVHSVGRVIIFY 231 (250)
Q Consensus 156 sCtT~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~----~~g~~k~~~~~kvlp~l 231 (250)
|||||||+|+||+||++|||+++.|||||++|+ ++ +++|++++|+||+ .+|++| +++||||+|
T Consensus 143 sCtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg-------~~----~~~r~~~~NiiP~~i~~~tg~~k--~~~kilp~l 209 (343)
T 2yyy_A 143 SCNTTGLCRILYAINSIADIKKARIVLVRRAAD-------PN----DDKTGPVNAITPNPVTVPSHHGP--DVVSVVPEF 209 (343)
T ss_dssp CHHHHHHHHHHHHHHTTSEEEEEEEEEEEESSC-------TT----CSSCCCSSCCEESSSSSSCTHHH--HHHHHCGGG
T ss_pred chhhHHHHHHHHHHHHHcCceEEEEEeeeeccC-------cC----cchhhHHhcccCCCCCCCCcchH--HHHHhhhcc
Confidence 999999999999999999999999999999997 22 4577999999999 999999 999999999
Q ss_pred CCceeEEEEeeceecccc
Q 025639 232 FFGLANSKISIIPYLTGS 249 (250)
Q Consensus 232 ~~ki~~~~vr~VPv~~g~ 249 (250)
++|++++|+| |||++|+
T Consensus 210 ~gkl~~~avR-VPv~~gh 226 (343)
T 2yyy_A 210 EGKILTSAVI-VPTTLMH 226 (343)
T ss_dssp TTSEEEEEEE-ESCSSCE
T ss_pred ccceeeEEEE-ecccceE
Confidence 9999999999 9999997
No 24
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=3.9e-45 Score=334.24 Aligned_cols=208 Identities=22% Similarity=0.336 Sum_probs=173.9
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
|||||+| ||+|||.++|+|.++. ++++.+. ++. +.+.+++ .+.++|+.+.++..
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~-~~~~~l~-----------~~~-----------s~~~~g~-~l~~~g~~i~v~~~- 55 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARN-FPLSELR-----------LYA-----------SPRSAGV-RLAFRGEEIPVEPL- 55 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT-CCCSCCE-----------EEE-----------CGGGSSC-EEEETTEEEEEEEC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CCcEEEE-----------Eee-----------ccccCCC-EEEEcCceEEEEeC-
Confidence 4899999 9999999999999653 4422222 221 1122344 58899999988865
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-----CCCeEEeecCccccCCCCCEEecCChhhh
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYKPELDIVSNASCTTN 160 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-----d~p~iV~gVN~~~~~~~~~IIs~~sCtT~ 160 (250)
+|+ +| ++|+||+|+|.+.++++++.|+++|+ ++|+++++ |+|++|||||++.|+..++|||||||+||
T Consensus 56 ~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~iIanp~C~tt 128 (331)
T 2yv3_A 56 PEG--PL---PVDLVLASAGGGISRAKALVWAEGGA--LVVDNSSAWRYEPWVPLVVPEVNREKIFQHRGIIANPNCTTA 128 (331)
T ss_dssp CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTC--EEEECSSSSTTCTTSCBCCTTSCGGGGGGCSSEEECCCHHHH
T ss_pred Chh--hc---CCCEEEECCCccchHHHHHHHHHCCC--EEEECCCccccCCCCCEEEcCcCHHHhcCCCCEEECCCHHHH
Confidence 555 58 79999999999999999999999999 57777765 57999999999999854679999999999
Q ss_pred hHHHHHHHHHhhcCeeEEEEEeeeccCCc------------cccccCCCCCCcccccccccccccCC--------CCCcc
Q 025639 161 CLAPLAKVIHDKFGIVEGLMTTVHSITAT------------QKTVDGPSMKDWRGGRAASFNIIPSS--------TGAAK 220 (250)
Q Consensus 161 ~la~~l~~L~~~fgI~~~~vtTiha~s~~------------q~~~D~~~~~d~~~~r~~~~NiiP~~--------~g~~k 220 (250)
|++|+|+||+++|||+++.|||||++||+ |+++|+++.++++++|++++|++|++ +++++
T Consensus 129 ~~~~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~~~ht~e~~ 208 (331)
T 2yv3_A 129 ILAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVIPHIDAFQENGYTREEM 208 (331)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCBSCCSCBCTTSCBHHHH
T ss_pred HHHHHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCcccccCccccCCCcHHHH
Confidence 99999999999999999999999999999 88899876689999999999999998 44433
Q ss_pred -h-hhhhhhc--cccCCceeEEEEeeceecccc
Q 025639 221 -V-HSVGRVI--IFYFFGLANSKISIIPYLTGS 249 (250)
Q Consensus 221 -~-~~~~kvl--p~l~~ki~~~~vr~VPv~~g~ 249 (250)
+ +|++|+| |++ +++++|+| ||+++|+
T Consensus 209 ~i~~e~~kil~~~~l--~v~~~~~r-VP~~~g~ 238 (331)
T 2yv3_A 209 KVVWETHKIFGDDTI--RISATAVR-VPTLRAH 238 (331)
T ss_dssp HHHHHHHHHTTCTTC--EEEEECCB-CSCSSEE
T ss_pred HHHHHHHHHhCCCCc--eEEEEEEE-eccCceE
Confidence 2 5669999 877 69999999 9999997
No 25
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=1e-43 Score=325.41 Aligned_cols=210 Identities=24% Similarity=0.286 Sum_probs=163.3
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcC--CCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 6 KIKIGING-FGRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~--~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
++||||+| ||+||+.++|+|.++ |+++++++++. .+ .+. .+.++|+.+.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~-------------~~------------~G~-~~~~~~~~i~~~ 56 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASE-------------RS------------EGK-TYRFNGKTVRVQ 56 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT-------------TT------------TTC-EEEETTEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECC-------------CC------------CCC-ceeecCceeEEe
Confidence 48999999 999999999999998 78999999864 01 012 355777777774
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-----CCCeEEeecCccccCC--CCCEEecC
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYKP--ELDIVSNA 155 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-----d~p~iV~gVN~~~~~~--~~~IIs~~ 155 (250)
+.+++ +|+ ++|+||+|+|.+.+++.++.|+++|+ ++|+++++ ++|++|||||++.|+. ..+|||||
T Consensus 57 -~~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIanp 129 (336)
T 2r00_A 57 -NVEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGV--VVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIANP 129 (336)
T ss_dssp -EGGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEECC
T ss_pred -cCChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCC--EEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEECC
Confidence 33444 685 89999999999999999999999999 46666654 5799999999999985 26799999
Q ss_pred ChhhhhHHHHHHHHHhhcCeeEEEEEeeeccCCccc-cccCCCC-----------CCcccccccccccccCCC-----CC
Q 025639 156 SCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-TVDGPSM-----------KDWRGGRAASFNIIPSST-----GA 218 (250)
Q Consensus 156 sCtT~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~-~~D~~~~-----------~d~~~~r~~~~NiiP~~~-----g~ 218 (250)
||+|||++|+|+||+++|||+++.|||||++||+|+ .+|+++. .+++++|++++|++|+++ |+
T Consensus 130 ~C~tt~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh 209 (336)
T 2r00_A 130 NCSTIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDNGY 209 (336)
T ss_dssp CHHHHHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------CCBCTTTCSSC
T ss_pred ChHHHHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcccccCCcccCCc
Confidence 999999999999999999999999999999999974 8887642 267899999999999974 76
Q ss_pred cc----h-hhhhhhccccCCceeEEEEeeceecccc
Q 025639 219 AK----V-HSVGRVIIFYFFGLANSKISIIPYLTGS 249 (250)
Q Consensus 219 ~k----~-~~~~kvlp~l~~ki~~~~vr~VPv~~g~ 249 (250)
++ + ++++|+||+++++++++|+| ||+++|+
T Consensus 210 ~~Ee~k~~~e~~kil~~~~~~v~~t~~r-VP~~~g~ 244 (336)
T 2r00_A 210 TKEEMKMVWETQKIFNDPSIMVNPTCVR-VPVFYGH 244 (336)
T ss_dssp BHHHHHHHHHHHHHTTCTTCEEEEEEEE-ESSCBSE
T ss_pred cHHHHHHHHHHHHHhCCCCCcEEEEeEE-eccCcEE
Confidence 54 1 58899999999999999999 9999997
No 26
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=3.1e-43 Score=322.36 Aligned_cols=208 Identities=20% Similarity=0.246 Sum_probs=176.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccc--cccccCCCcce-EEeCCeeeEECCEEEEEEe
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYD--SVHGQWKHNEL-KVKDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~yd--S~~G~~~~~~v-~~~~~~~l~~~g~~i~v~~ 83 (250)
+||||+|+|+|||.++|+|.++++|++++|++. +++..+++++|+ ++||+|. +.+ .+++. .+.+++
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~l~v~~------- 70 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKT--RPDFEARMALKKGYDLYVAIP-ERVKLFEKA-GIEVAG------- 70 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSG-GGHHHHHHT-TCCCCE-------
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcC--ChhHHHHhcCCcchhhccccc-cceeeecCC-ceEEcC-------
Confidence 799999999999999999999999999999997 577888999988 8999887 554 34333 355543
Q ss_pred cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-CC--CeEEeecCccccCCCCCEEecCChhhh
Q 025639 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DA--PMFVVGVNEKEYKPELDIVSNASCTTN 160 (250)
Q Consensus 84 ~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-d~--p~iV~gVN~~~~~~~~~IIs~~sCtT~ 160 (250)
+++++.| ++|+||+|||.+.+++.++.|+++|+ +||+++|.+ |+ |++|||+|++.++. .+|||||||+|+
T Consensus 71 --~~~~~~~---~vDvV~~atp~~~~~~~a~~~l~aG~-~VId~sp~~~d~~~~~~V~gvN~e~~~~-~~iIanp~C~tt 143 (337)
T 1cf2_P 71 --TVDDMLD---EADIVIDCTPEGIGAKNLKMYKEKGI-KAIFQGGEKHEDIGLSFNSLSNYEESYG-KDYTRVVSCNTT 143 (337)
T ss_dssp --EHHHHHH---TCSEEEECCSTTHHHHHHHHHHHHTC-CEEECTTSCHHHHSCEECHHHHGGGGTT-CSEEEECCHHHH
T ss_pred --CHHHHhc---CCCEEEECCCchhhHHHHHHHHHcCC-EEEEecCCCCccCCCeEEeeeCHHHhcC-CCEEEcCCcHHH
Confidence 1222223 79999999999999999999999996 477766664 34 99999999999984 689999999999
Q ss_pred hHHHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccC----CCCCcchhhhhhhccccCCcee
Q 025639 161 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPS----STGAAKVHSVGRVIIFYFFGLA 236 (250)
Q Consensus 161 ~la~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~----~~g~~k~~~~~kvlp~l~~ki~ 236 (250)
||+|+|+||+++|||+++.|||||++|+ ++ +.+|++++|++|+ .++.++ |++|+| +| +++
T Consensus 144 ~l~~~l~pL~~~~gI~~~~vtt~~a~s~-------p~----~~~~~~~~NiiP~~i~~~~~~~~--ei~kil-~l--~v~ 207 (337)
T 1cf2_P 144 GLCRTLKPLHDSFGIKKVRAVIVRRGAD-------PA----QVSKGPINAIIPNPPKLPSHHGP--DVKTVL-DI--NID 207 (337)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEESSC-------TT----CTTCCCSSCCEESSSSSSCTHHH--HHHTTS-CC--CEE
T ss_pred HHHHHHHHHHHhcCcceeEEEEEEEeec-------CC----ccccchhcCEEeccCCCCCcchH--HHHhhh-ee--EEE
Confidence 9999999999999999999999999986 32 3466899999999 567667 999999 87 699
Q ss_pred EEEEeeceecccc
Q 025639 237 NSKISIIPYLTGS 249 (250)
Q Consensus 237 ~~~vr~VPv~~g~ 249 (250)
++|+| ||+++|+
T Consensus 208 ~t~~r-VPv~~g~ 219 (337)
T 1cf2_P 208 TMAVI-VPTTLMH 219 (337)
T ss_dssp EEEEE-ESCCSCE
T ss_pred EEEEE-cCccCeE
Confidence 99999 9999997
No 27
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.2e-42 Score=318.68 Aligned_cols=213 Identities=15% Similarity=0.179 Sum_probs=173.9
Q ss_pred CceeEEEEc-CChHHHHHHHHHH--cCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEE
Q 025639 5 KKIKIGING-FGRIGRLVARVAL--QRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~--~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v 81 (250)
|++||+|+| ||+||+.++|+|. .+++++++++++. .+ .| . .+.++|+.+.+
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~-------------~~-~g-----------~-~~~~~g~~i~~ 58 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA-------------ES-AG-----------Q-RMGFAESSLRV 58 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT-------------TT-TT-----------C-EEEETTEEEEC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecC-------------CC-CC-----------C-ccccCCcceEE
Confidence 457999999 9999999999999 5588999999864 01 11 2 35566766666
Q ss_pred EecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC--CCCeEEeecCccccCCCC--CEEecCCh
Q 025639 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK--DAPMFVVGVNEKEYKPEL--DIVSNASC 157 (250)
Q Consensus 82 ~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~--d~p~iV~gVN~~~~~~~~--~IIs~~sC 157 (250)
.. .+++. |+ ++|+||+|+|.+.+++.++.|+++|+|.|.+|++.. ++|+++||+|++.++..+ +|||||||
T Consensus 59 ~~-~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C 133 (340)
T 2hjs_A 59 GD-VDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCA 133 (340)
T ss_dssp EE-GGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCH
T ss_pred ec-CCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCH
Confidence 43 34543 75 899999999999999999999999997555566653 379999999999998532 79999999
Q ss_pred hhhhHHHHHHHHHhhcCeeEEEEEeeeccCCccc-cccCCCC--CCcc---------cccccccccccCCC-----CCcc
Q 025639 158 TTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-TVDGPSM--KDWR---------GGRAASFNIIPSST-----GAAK 220 (250)
Q Consensus 158 tT~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~-~~D~~~~--~d~~---------~~r~~~~NiiP~~~-----g~~k 220 (250)
+|+|++|+|+||+++|||+++.|||||++||+|+ .+|.++. ++|| ++|++++|++|+++ |.++
T Consensus 134 ~tt~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~ 213 (340)
T 2hjs_A 134 VAAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHSA 213 (340)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCTTSCBH
T ss_pred HHHHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeeccccCcccCCccH
Confidence 9999999999999999999999999999999995 5665321 2333 46789999999987 7554
Q ss_pred ----h-hhhhhhccccCCceeEEEEeeceecccc
Q 025639 221 ----V-HSVGRVIIFYFFGLANSKISIIPYLTGS 249 (250)
Q Consensus 221 ----~-~~~~kvlp~l~~ki~~~~vr~VPv~~g~ 249 (250)
+ ++++||+|+++++++++|+| ||+++|+
T Consensus 214 Ee~k~~~~~~kil~~~~~~v~~~~~r-VP~~~g~ 246 (340)
T 2hjs_A 214 IERRIFAEVQALLGERIGPLNVTCIQ-APVFFGD 246 (340)
T ss_dssp HHHHHHHHHHHHTGGGBCCEEEEEEE-CSCSSCE
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEeEE-cCcCceE
Confidence 1 57899999999999999999 9999997
No 28
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=100.00 E-value=6.6e-43 Score=323.50 Aligned_cols=213 Identities=15% Similarity=0.143 Sum_probs=170.6
Q ss_pred eeEEEEc-CChHHHHHHH-HHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 7 IKIGING-FGRIGRLVAR-VALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr-~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
+||||+| ||+||+.++| +|.+++ |+++.+ +++.|+| +|+-- . .++|+.+.+...
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~-~~~v~i-----------~~~~~~s-~G~~v----~-------~~~g~~i~~~~~ 57 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERD-FDAIRP-----------VFFSTSQ-LGQAA----P-------SFGGTTGTLQDA 57 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTG-GGGSEE-----------EEEESSS-TTSBC----C-------GGGTCCCBCEET
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCC-CCeEEE-----------EEEEeCC-CCCCc----c-------ccCCCceEEEec
Confidence 6999999 9999999999 666665 764444 6777776 66411 1 133455555544
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-----CCCeEEeecCccccCCC--C--CEEecC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYKPE--L--DIVSNA 155 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-----d~p~iV~gVN~~~~~~~--~--~IIs~~ 155 (250)
.++++ |+ ++|+||+|+|.+.++++++.|+++|+|++|||+|++ |.|++|||||++.++.. + ++|+||
T Consensus 58 ~~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp 133 (367)
T 1t4b_A 58 FDLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGG 133 (367)
T ss_dssp TCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeC
Confidence 34443 75 899999999999999999999999998899999986 57999999999999742 1 699999
Q ss_pred ChhhhhHHHHHHHHHhhcCeeEEEEEeeeccCCccc--c-----------------ccCCCCC---Cccc----------
Q 025639 156 SCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK--T-----------------VDGPSMK---DWRG---------- 203 (250)
Q Consensus 156 sCtT~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~--~-----------------~D~~~~~---d~~~---------- 203 (250)
||+|+|++++|+||+++|+|+++.|+|||++||+++ . +|+|+ + |+|+
T Consensus 134 ~Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~-~~ild~~r~~~~~~~~~~ 212 (367)
T 1t4b_A 134 NCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPS-SAILDIERKVTTLTRSGE 212 (367)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTT-CCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccc-cchhhhhhcccccccccc
Confidence 999999999999999999999999999999999953 1 34454 3 4444
Q ss_pred ------ccccccccccCCCC-----Ccc----h-hhhhhhccc-cCCceeEEEEeeceecccc
Q 025639 204 ------GRAASFNIIPSSTG-----AAK----V-HSVGRVIIF-YFFGLANSKISIIPYLTGS 249 (250)
Q Consensus 204 ------~r~~~~NiiP~~~g-----~~k----~-~~~~kvlp~-l~~ki~~~~vr~VPv~~g~ 249 (250)
++++++|+||++++ .++ + +|++|++|+ .+.+++++|+| ||+++|+
T Consensus 213 ~~~~~f~~~~a~NiiP~~~~~~~~~~t~EE~k~~~e~~kil~~~~~~~v~~t~vr-VPv~~g~ 274 (367)
T 1t4b_A 213 LPVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVR-VGALRCH 274 (367)
T ss_dssp SCCTTTSSCCTTCEESCCSCBCTTSCBHHHHHHHHHHHHHHTCSSCCCEEEECCE-ESCSSEE
T ss_pred CcccccchhhhCceEEEecCccccCccHHHHHHHHHHHHHhCcCCCceEEEEEEE-cCccceE
Confidence 68899999999876 222 1 589999965 56699999999 9999996
No 29
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=3.7e-41 Score=307.95 Aligned_cols=208 Identities=21% Similarity=0.244 Sum_probs=177.7
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccc--cccccCCCcce-EEeCCeeeEECCEEEEE
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYD--SVHGQWKHNEL-KVKDEKTLLFGEKPVAV 81 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~yd--S~~G~~~~~~v-~~~~~~~l~~~g~~i~v 81 (250)
|++||||+|+|+|||.++|++.++|++++++|+|. +++.+.++++|+ ++||+|. +.+ .++++ .+.+.+
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~~~v~~----- 71 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKT--KPDFEAYRAKELGIPVYAASE-EFIPRFEKE-GFEVAG----- 71 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEES--SCSHHHHHHHHTTCCEEESSG-GGHHHHHHH-TCCCSC-----
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHHHHHhcCcccccccc-ccceeccCC-ceEEcC-----
Confidence 56899999999999999999999999999999997 578888999988 8999887 544 22222 233322
Q ss_pred EecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-C-C-CeEEeecCccccCCCCCEEecCChh
Q 025639 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-D-A-PMFVVGVNEKEYKPELDIVSNASCT 158 (250)
Q Consensus 82 ~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-d-~-p~iV~gVN~~~~~~~~~IIs~~sCt 158 (250)
+++++.| ++|+|++|||.+.+.+.++.|+++| |+|++++|.+ | . |++|+++|++.|+. .++|+||||+
T Consensus 72 ----d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aG-k~Vi~sap~~~d~~~~~~v~~vn~~~~~~-~~ii~~~~C~ 142 (334)
T 2czc_A 72 ----TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKADVAEVSFVAQANYEAALG-KNYVRVVSCN 142 (334)
T ss_dssp ----BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCGGGSSEEECHHHHGGGGTT-CSEEEECCHH
T ss_pred ----cHHHhcc---CCCEEEECCCccccHHHHHHHHHcC-CceEeecccccccccceEEeccCHHHHhh-CCcEEecCcH
Confidence 3444434 7999999999999999999999999 5788888875 4 4 59999999999984 6899999999
Q ss_pred hhhHHHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccC---CCCCcchhhhhhhccccCCce
Q 025639 159 TNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPS---STGAAKVHSVGRVIIFYFFGL 235 (250)
Q Consensus 159 T~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~---~~g~~k~~~~~kvlp~l~~ki 235 (250)
|+||+|++++|++. |+++.++|+|++|+. |+++|++++||+|+ .+|+++ +++|+|| |+ +
T Consensus 143 t~~l~P~~~~l~~~--I~~g~i~ti~a~s~~-----------~~~~r~~~~niiP~i~~~~g~~~--~i~~~l~-l~--l 204 (334)
T 2czc_A 143 TTGLVRTLSAIREY--ADYVYAVMIRRAADP-----------NDTKRGPINAIKPTVEVPSHHGP--DVQTVIP-IN--I 204 (334)
T ss_dssp HHHHHHHHHHHGGG--EEEEEEEEEEESSCT-----------TCCSCCCSSCCEECCSSSCTHHH--HHTTTSC-CC--E
T ss_pred HHHHHHHHHHHHHH--hccccEEEEEEecCc-----------cccccChhhcEEeccCCCCchhh--hhheEEE-EE--E
Confidence 99999999999987 999999999999974 35678999999999 889889 9999999 74 9
Q ss_pred eEEEEeeceecccc
Q 025639 236 ANSKISIIPYLTGS 249 (250)
Q Consensus 236 ~~~~vr~VPv~~g~ 249 (250)
+++|+| ||+++|+
T Consensus 205 ~~~~~r-VPv~~~~ 217 (334)
T 2czc_A 205 ETMAFV-VPTTLMH 217 (334)
T ss_dssp EEEEEE-ESCSSCE
T ss_pred EEEEEE-cCCCceE
Confidence 999999 9999986
No 30
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=3.7e-40 Score=302.27 Aligned_cols=211 Identities=18% Similarity=0.238 Sum_probs=162.6
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEe-CCeeeEECCEEEEEEecC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVK-DEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~-~~~~l~~~g~~i~v~~~~ 85 (250)
+||||+|+|+|||.++|+|.+++++++++|+|. +++..+++++++- ++ +... +-..+ +.+..+.+. .
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~--~~~~~~~~a~~~g----~~---~~~~~~~~~~-~~~~~v~v~--~ 69 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT--SPNYEAFIAHRRG----IR---IYVPQQSIKK-FEESGIPVA--G 69 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--SCSHHHHHHHHTT----CC---EECCGGGHHH-HHTTTCCCC--C
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcC--ChHHHHHHHHhcC----cc---eecCcCHHHH-hcccccccc--c
Confidence 799999999999999999999999999999997 5677777776531 01 0000 00001 111111111 0
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCC--CCeEEeecCccccCCCCCEEecCChhhhhHH
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD--APMFVVGVNEKEYKPELDIVSNASCTTNCLA 163 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d--~p~iV~gVN~~~~~~~~~IIs~~sCtT~~la 163 (250)
+++++ + .++|+||+|||.+.+++.++.|+++|+|++.+|++..+ +++|++++|++.+.+ .++|+|||||||||+
T Consensus 70 ~~e~l-~--~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~-~~iIsnpsCtt~~l~ 145 (340)
T 1b7g_O 70 TVEDL-I--KTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG-KKYIRVVSCNTTALL 145 (340)
T ss_dssp CHHHH-H--HHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT-CSEEEECCHHHHHHH
T ss_pred CHhHh-h--cCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC-CCCcccCCcHHHHHH
Confidence 11111 1 16899999999999999999999999977666766544 479999999877653 459999999999999
Q ss_pred HHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccC----CCCCcchhhhhhhccccCCceeEEE
Q 025639 164 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPS----STGAAKVHSVGRVIIFYFFGLANSK 239 (250)
Q Consensus 164 ~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~----~~g~~k~~~~~kvlp~l~~ki~~~~ 239 (250)
|+|+||+++|||+++.|||+|+++. ++ ++ .|++.+|++|+ .+|.++ +++|++|+| +++++|
T Consensus 146 ~~lk~L~~~~gI~~~~~tt~~~~~~-------~~-~~---~~~~~~niip~~~~i~t~~a~--ev~~vlp~l--~l~~~a 210 (340)
T 1b7g_O 146 RTICTVNKVSKVEKVRATIVRRAAD-------QK-EV---KKGPINSLVPDPATVPSHHAK--DVNSVIRNL--DIATMA 210 (340)
T ss_dssp HHHHHHHTTSCEEEEEEEEEEESSC-------TT-CC---SCCCSSCCEESSSSSSCTHHH--HHHTTSTTC--EEEEEE
T ss_pred HHHHHHHHhCCeEEEEEEEEeccCC-------cc-cc---hHHHHcCCCCCCcCCCCCchh--HHHHhCCCC--cEEEEE
Confidence 9999999999999999999998752 32 33 45788999987 578888 999999998 599999
Q ss_pred Eeeceecccc
Q 025639 240 ISIIPYLTGS 249 (250)
Q Consensus 240 vr~VPv~~g~ 249 (250)
+| |||++||
T Consensus 211 ~r-VPv~~gh 219 (340)
T 1b7g_O 211 VI-APTTLMH 219 (340)
T ss_dssp EE-ESCSSCE
T ss_pred EE-eccCCeE
Confidence 99 9999997
No 31
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.5e-39 Score=299.17 Aligned_cols=215 Identities=19% Similarity=0.213 Sum_probs=173.3
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+| ||+||+.++|+|.++|+++++++++. +. ....+|++.|+.+. ++ .+.++++.+.+ ++
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s--~~---~~g~~~~~~~~~~~-------~~-~~~~~~~~~~~-~~ 69 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSAS--PS---KIGKKYKDAVKWIE-------QG-DIPEEVQDLPI-VS 69 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECC--GG---GTTSBHHHHCCCCS-------SS-SCCHHHHTCBE-EC
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecC--hh---hcCCCHHHhcCccc-------cc-ccccCCceeEE-ee
Confidence 48999999 99999999999999999999999843 00 01234677776542 12 23333444444 22
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-----CCCeEEeecCccccCC----------CC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYKP----------EL 149 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-----d~p~iV~gVN~~~~~~----------~~ 149 (250)
.+++. |+ ++|+||+|+|.+.+++.++.|+++|+ .|||++++ |+|+++||+|++.|.. ..
T Consensus 70 ~d~~~--~~--~vDvVf~atp~~~s~~~a~~~~~aG~--~VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~ 143 (350)
T 2ep5_A 70 TNYED--HK--DVDVVLSALPNELAESIELELVKNGK--IVVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWKG 143 (350)
T ss_dssp SSGGG--GT--TCSEEEECCCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCSS
T ss_pred CCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCC--EEEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccCc
Confidence 34443 53 89999999999999999999999998 37888875 5899999999998873 23
Q ss_pred CEEecCChhhhhHHHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCC-cch-hhhhhh
Q 025639 150 DIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGA-AKV-HSVGRV 227 (250)
Q Consensus 150 ~IIs~~sCtT~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~-~k~-~~~~kv 227 (250)
+|||||||+|+|++|+|+||+++|||+++.|+|+|++||+|+. +. ..+.+++|++|+.+++ .|. .|++|+
T Consensus 144 ~iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~--~~------~~~~~~~ni~py~~~~e~k~~~E~~~~ 215 (350)
T 2ep5_A 144 ILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYN--GI------SFMAIEGNIIPYIKGEEDKIAKELTKL 215 (350)
T ss_dssp EEEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSS--SS------BHHHHTTCCBCCCTTHHHHHHHHHHHH
T ss_pred eEEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCC--CC------CChHHhCCEEeccCCcchHHHHHHHHH
Confidence 6999999999999999999999999999999999999999865 22 2457899999999985 553 678999
Q ss_pred ccccCC--------ceeEEEEeeceecccc
Q 025639 228 IIFYFF--------GLANSKISIIPYLTGS 249 (250)
Q Consensus 228 lp~l~~--------ki~~~~vr~VPv~~g~ 249 (250)
||+++| +++++|+| ||+++|+
T Consensus 216 l~~~~g~~~~~~~~~v~~t~~r-vP~~~g~ 244 (350)
T 2ep5_A 216 NGKLENNQIIPANLDSTVTSIR-VPTRVGH 244 (350)
T ss_dssp TCEECSSSEECCCCEEEEEEEE-CSCSSCE
T ss_pred HhhccccccccccccEEEEeEE-ecccceE
Confidence 998876 89999999 9999996
No 32
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=5.2e-38 Score=289.16 Aligned_cols=218 Identities=21% Similarity=0.263 Sum_probs=170.4
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEe
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~ 83 (250)
|++||||+| ||+||+.++|+|.++|+++|+++++.... ...++++.|+.+. . . .+..+++.+.+.
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~-----~g~~~~~~~~~~~-~------~-~~~~~~~~~~~~- 72 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERS-----AGKKYKDACYWFQ-D------R-DIPENIKDMVVI- 72 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTT-----TTSBHHHHSCCCC-S------S-CCCHHHHTCBCE-
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccccc-----ccccHHHhccccc-c------c-ccccCceeeEEE-
Confidence 558999999 99999999999999999999999852011 1123466676542 1 0 111122223332
Q ss_pred cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-----CCCeEEeecCccccCC----------C
Q 025639 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYKP----------E 148 (250)
Q Consensus 84 ~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-----d~p~iV~gVN~~~~~~----------~ 148 (250)
+.++++ |.+.++|+||+|+|.+.+.+.++.|+++|+ .|||++++ +.|+++||+|++.|.. .
T Consensus 73 ~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~--~VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~ 148 (354)
T 1ys4_A 73 PTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGK--LIFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGWD 148 (354)
T ss_dssp ESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTC--EEEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCCS
T ss_pred eCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCC--EEEECCchhcCCCCCCccCcccCHHHhcChhhhhhhcccC
Confidence 235554 643479999999999999999999999998 48999875 4799999999998863 2
Q ss_pred CCEEecCChhhhhHHHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCC-cch-hhhhh
Q 025639 149 LDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGA-AKV-HSVGR 226 (250)
Q Consensus 149 ~~IIs~~sCtT~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~-~k~-~~~~k 226 (250)
.++|+||||+|+|++|+|+||+++|||+++.++|+|++||+|+. +.+ .+.+++|++|+.++. .|. .|+.+
T Consensus 149 ~~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~--~~~------~~~~~~ni~py~~~~~~k~~~Ei~~ 220 (354)
T 1ys4_A 149 GAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYN--GVP------SMAILDNLIPFIKNEEEKMQTESLK 220 (354)
T ss_dssp SEEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTT--TSC------HHHHTTCCBSCCTTHHHHHHHHHHH
T ss_pred CeEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCcc--ccc------chHHhCCEEeccCchhhHHHHHHHH
Confidence 35999999999999999999999999999999999999999765 221 357899999999885 443 68889
Q ss_pred hccccCC--------ceeEEEEeeceecccc
Q 025639 227 VIIFYFF--------GLANSKISIIPYLTGS 249 (250)
Q Consensus 227 vlp~l~~--------ki~~~~vr~VPv~~g~ 249 (250)
+|+++++ +++++|+| ||+++|+
T Consensus 221 ~l~~~~g~~~~~~~~~v~~~~~r-vP~~~G~ 250 (354)
T 1ys4_A 221 LLGTLKDGKVELANFKISASCNR-VAVIDGH 250 (354)
T ss_dssp HTSEEETTEEECCCCEEEEECCB-CSCSSCE
T ss_pred HHhccccccccCCCceEEEEEEE-ecccceE
Confidence 9987654 89999999 9999996
No 33
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=100.00 E-value=6.4e-36 Score=276.35 Aligned_cols=211 Identities=15% Similarity=0.260 Sum_probs=164.4
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcC--CCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEE
Q 025639 5 KKIKIGING-FGRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~--~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v 81 (250)
|++||||+| +|.+|+.++|+|.++ |.++++.+... +..+. .+.+.|+.+.+
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~-------------------------~saG~-~~~~~~~~~~~ 54 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA-------------------------RSAGK-SLKFKDQDITI 54 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECT-------------------------TTTTC-EEEETTEEEEE
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcc-------------------------ccCCC-cceecCCCceE
Confidence 779999999 999999999999998 55665555322 11223 46677777666
Q ss_pred EecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-----CCCeEEeecCccccCCCCCEEecCC
Q 025639 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYKPELDIVSNAS 156 (250)
Q Consensus 82 ~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-----d~p~iV~gVN~~~~~~~~~IIs~~s 156 (250)
.. .+++. |. ++|+||+|+|.+.+++.++.|+++|+ .||+++++ |+|++|||||++.++...+||||||
T Consensus 55 ~~-~~~~~--~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vIDlSa~~R~~~~~p~~vpevN~~~i~~~~~iIanpg 127 (366)
T 3pwk_A 55 EE-TTETA--FE--GVDIALFSAGSSTSAKYAPYAVKAGV--VVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPN 127 (366)
T ss_dssp EE-CCTTT--TT--TCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCHHHHGGGGTTCCSEEECCC
T ss_pred ee-CCHHH--hc--CCCEEEECCChHhHHHHHHHHHHCCC--EEEEcCCccccCCCceEEEccCCHHHHcCCCCeEECCC
Confidence 42 34443 43 89999999999999999999999999 46777653 4799999999999986578999999
Q ss_pred hhhhhHHHHHHHHHhhcCeeEEEEEeeeccCCccc-ccc-----------C------CCCCCc-----cccccccccccc
Q 025639 157 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-TVD-----------G------PSMKDW-----RGGRAASFNIIP 213 (250)
Q Consensus 157 CtT~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~-~~D-----------~------~~~~d~-----~~~r~~~~NiiP 213 (250)
|+|+|++++|+||+++|+|+++.|+|+|++||+++ ..+ + ...+.+ ++-+++++|++|
T Consensus 128 C~tt~~~l~l~pL~~~~~i~~i~v~t~~~vSGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~y~~~~~HrH~~ia~NviP 207 (366)
T 3pwk_A 128 CSTIQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALP 207 (366)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEEEEBCGGGGCHHHHHHHHHHHHHHHHHCCCGGGCCCSSSSCTTSSCCCCCTTCCBC
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEEEEEEeccccCcchhhHHHHHHHHHhcccccccccCcccCCcccccccchhhccccc
Confidence 99999999999999999999999999999999864 221 1 000111 111789999999
Q ss_pred CC-----CCCcc----h-hhhhhhccccCCceeEEEEeeceecccc
Q 025639 214 SS-----TGAAK----V-HSVGRVIIFYFFGLANSKISIIPYLTGS 249 (250)
Q Consensus 214 ~~-----~g~~k----~-~~~~kvlp~l~~ki~~~~vr~VPv~~g~ 249 (250)
++ +|+++ + +|++|++.....+++.||+| ||+++|-
T Consensus 208 ~I~~~~~~g~t~EE~k~~~E~~kil~~~~~~v~ftp~r-VPv~rG~ 252 (366)
T 3pwk_A 208 QIDVFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVR-IPVLSAH 252 (366)
T ss_dssp CSSCBCTTSSBHHHHHHHHHHHHHTTCTTSEEEEECCB-CSCSSCE
T ss_pred eecccccCCCcHHHHHHHHHHHHHhcCCCCCeEEEEEE-echhccE
Confidence 96 46765 1 56778887666789999999 9999983
No 34
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=100.00 E-value=8.4e-37 Score=283.14 Aligned_cols=211 Identities=14% Similarity=0.123 Sum_probs=160.0
Q ss_pred ceeEEEEc-CChHHHHHHH-HHHcCC--CceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeE-ECCEEEE
Q 025639 6 KIKIGING-FGRIGRLVAR-VALQRD--DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLL-FGEKPVA 80 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr-~l~~~~--~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~-~~g~~i~ 80 (250)
++||||+| +|.+|+.++| +|++|| .++++.+... + -| + .+. +.|+.+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~--------------~-aG-----------~-~~~~~~~~~~~ 56 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS--------------N-AG-----------G-KAPSFAKNETT 56 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS--------------C-TT-----------S-BCCTTCCSCCB
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech--------------h-cC-----------C-CHHHcCCCceE
Confidence 47999999 9999999999 999998 3565555321 0 11 1 111 3333333
Q ss_pred EEecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-----CCCeEEeecCccccCCC--C--CE
Q 025639 81 VFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYKPE--L--DI 151 (250)
Q Consensus 81 v~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-----d~p~iV~gVN~~~~~~~--~--~I 151 (250)
+....+++ .|. ++|+||+|+|.+.+++.++.|+++|+|++|||+|++ |+|++|||||++.++.. + ++
T Consensus 57 v~~~~~~~--~~~--~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~ 132 (377)
T 3uw3_A 57 LKDATSID--DLK--KCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKN 132 (377)
T ss_dssp CEETTCHH--HHH--TCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCE
T ss_pred EEeCCChh--Hhc--CCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcE
Confidence 33211222 243 899999999999999999999999998889999985 47999999999998642 3 35
Q ss_pred EecCChhhhhHHHHHHHHHhhcCeeEEEEEeeeccCCccc-c-----------ccC-------C----------------
Q 025639 152 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-T-----------VDG-------P---------------- 196 (250)
Q Consensus 152 Is~~sCtT~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~-~-----------~D~-------~---------------- 196 (250)
|+||||+|+|++++|+||+++|+|+++.|+|||++||+.+ . +++ |
T Consensus 133 Ianp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~l~~~~~~~~~~p~~~ild~~~~~~~~~~ 212 (377)
T 3uw3_A 133 FIGGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAGAQNMRELLAQMGTLNGAVAAQLADPASAILDIDRRVLAAMN 212 (377)
T ss_dssp EEECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHTTHHHHTCTTSCHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHHHHhCCCCEEEEeeeecccccchhhHHHHHHHHHHhhcccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999853 1 110 1
Q ss_pred --CCCCcccccccccccccCCC-----CCcc----h-hhhhhhcccc------CCceeEEEEeeceeccc
Q 025639 197 --SMKDWRGGRAASFNIIPSST-----GAAK----V-HSVGRVIIFY------FFGLANSKISIIPYLTG 248 (250)
Q Consensus 197 --~~~d~~~~r~~~~NiiP~~~-----g~~k----~-~~~~kvlp~l------~~ki~~~~vr~VPv~~g 248 (250)
....-.+++++++|++|++. |+++ + +|++|+++.+ ..++++||+| |||++|
T Consensus 213 ~~~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~~~~~i~Vs~t~vr-VPv~rG 281 (377)
T 3uw3_A 213 GDAMPTSQFGVPLAGSLIPWIDKDLGNGMSREEWKGGAETNKILGKPAMGEPGSVPVDGLCVR-IGAMRC 281 (377)
T ss_dssp STTSCCTTTSSCCTBSCBSCCSCBCSSSCBHHHHHHHHHHHHHHTCCCTTSTTCCCEEEECCB-CSBSSE
T ss_pred ccccccccccccccCceEEeecccccCCCCHHHHHHHHHHHHHhcccccccCCCceEEEEeEE-ecccce
Confidence 00112457889999999963 5554 2 7799999764 5689999999 999998
No 35
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=100.00 E-value=1.4e-36 Score=281.01 Aligned_cols=210 Identities=16% Similarity=0.145 Sum_probs=159.5
Q ss_pred eeEEEEc-CChHHHHHHH-HHHcCC--CceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeE-ECCEEEEE
Q 025639 7 IKIGING-FGRIGRLVAR-VALQRD--DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLL-FGEKPVAV 81 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr-~l~~~~--~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~-~~g~~i~v 81 (250)
|||||+| +|.+|+.++| +|.+|| .++++.+... + -|+ .+. +.|+.+.+
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~--------------~-aG~------------~~~~~~~~~~~~ 53 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS--------------Q-IGV------------PAPNFGKDAGML 53 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS--------------S-TTS------------BCCCSSSCCCBC
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecc--------------c-cCc------------CHHHhCCCceEE
Confidence 5899999 9999999999 999998 3565555322 1 121 111 33333333
Q ss_pred EecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-----CCCeEEeecCccccCCC--C--CEE
Q 025639 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYKPE--L--DIV 152 (250)
Q Consensus 82 ~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-----d~p~iV~gVN~~~~~~~--~--~II 152 (250)
....+++. |. ++|+||+|+|.+.+++.++.|+++|+|++|||+|++ |+|++|||||++.++.. + ++|
T Consensus 54 ~~~~~~~~--~~--~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~I 129 (370)
T 3pzr_A 54 HDAFDIES--LK--QLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTF 129 (370)
T ss_dssp EETTCHHH--HT--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEE
T ss_pred EecCChhH--hc--cCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEE
Confidence 32112222 33 899999999999999999999999998899999985 47999999999998642 3 459
Q ss_pred ecCChhhhhHHHHHHHHHhhcCeeEEEEEeeeccCCccc-ccc------------------------------------C
Q 025639 153 SNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-TVD------------------------------------G 195 (250)
Q Consensus 153 s~~sCtT~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~-~~D------------------------------------~ 195 (250)
|||||+|+|++|+|+||+++|+|+++.|+|||++||+.+ .++ +
T Consensus 130 anp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~~~~~~~~~l~~p~~~ild~~~~~~~~~~~ 209 (370)
T 3pzr_A 130 VGGNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGAGAQNMRELISQMGVINDAVSSELANPASSILDIDKKVAETMRS 209 (370)
T ss_dssp EECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHS
T ss_pred EcCChHHHHHHHHHHHHHHhCCCcEEEEEeEEeccccChhhHHHHHHHHHHhhccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999853 110 1
Q ss_pred CCCCCcccccccccccccCCC-----CCcc----h-hhhhhhccc--cCCceeEEEEeeceeccc
Q 025639 196 PSMKDWRGGRAASFNIIPSST-----GAAK----V-HSVGRVIIF--YFFGLANSKISIIPYLTG 248 (250)
Q Consensus 196 ~~~~d~~~~r~~~~NiiP~~~-----g~~k----~-~~~~kvlp~--l~~ki~~~~vr~VPv~~g 248 (250)
.......+++++++|++|++. |+++ + +|++|+++. -..++++||+| |||++|
T Consensus 210 ~~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~i~V~~t~vr-VPv~rG 273 (370)
T 3pzr_A 210 GSFPTDNFGVPLAGSLIPWIDVKRDNGQSKEEWKAGVEANKILGLQDSPVPIDGTCVR-IGAMRC 273 (370)
T ss_dssp TTSCCTTTSSCCTTSEESCCSCBCTTSCBHHHHHHHHHHHHHTTCTTSCCCEECCCCE-ESCSSE
T ss_pred cccccccccccccCceeeeccccccCCCCHHHHHHHHHHHHHhCccCCCceEEEEeEE-ecccce
Confidence 000112457789999999974 5554 2 788999874 34589999999 999998
No 36
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=100.00 E-value=8.8e-35 Score=266.81 Aligned_cols=208 Identities=21% Similarity=0.357 Sum_probs=161.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHcC--CCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEe
Q 025639 7 IKIGING-FGRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~--~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~ 83 (250)
+||||+| +|.+|+.++|+|.+| |.++++.+... +..+. .+.+.|+.+.+..
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~-------------------------~~aG~-~~~~~~~~~~~~~ 55 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASA-------------------------RSQGR-KLAFRGQEIEVED 55 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT-------------------------TTSSC-EEEETTEEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECc-------------------------ccCCC-ceeecCCceEEEe
Confidence 6999999 999999999999999 55555554321 11233 5667777776643
Q ss_pred cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-----CCCeEEeecCc-cccCCC-CCEEecCC
Q 025639 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNE-KEYKPE-LDIVSNAS 156 (250)
Q Consensus 84 ~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-----d~p~iV~gVN~-~~~~~~-~~IIs~~s 156 (250)
.+++ .|. ++|+||+|+|.+.+++.++.|+++|+ +||+++++ |+|++|||||+ +.++.. ++||||||
T Consensus 56 -~~~~--~~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpg 128 (344)
T 3tz6_A 56 -AETA--DPS--GLDIALFSAGSAMSKVQAPRFAAAGV--TVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPN 128 (344)
T ss_dssp -TTTS--CCT--TCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCC
T ss_pred -CCHH--Hhc--cCCEEEECCChHHHHHHHHHHHhCCC--EEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCC
Confidence 2343 343 89999999999999999999999999 67888764 58999999999 888753 58999999
Q ss_pred hhhhhHHHHHHHHHhhcCeeEEEEEeeeccCCccc-c-------------------ccCCCC---CCccccccccccccc
Q 025639 157 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-T-------------------VDGPSM---KDWRGGRAASFNIIP 213 (250)
Q Consensus 157 CtT~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~-~-------------------~D~~~~---~d~~~~r~~~~NiiP 213 (250)
|+|+|++++|+||+++|+|+++.|+|||++||+++ . +++... +...++..+++|++|
T Consensus 129 C~tt~~~l~l~pL~~~~~i~~i~v~t~~~~SGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aynv~p 208 (344)
T 3tz6_A 129 CTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVP 208 (344)
T ss_dssp HHHHHHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHGGGGGGGGTCTTSSCCCCCSSSSSCCTTCCBC
T ss_pred cHHHHHHHHHHHHHHhCCCceEEEEeccCCCccChhhhHHHHHHHHhhhccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999863 1 222110 112456779999999
Q ss_pred CC-----CCC--cc----h-hhhhhhccccCCceeEEEEeeceeccc
Q 025639 214 SS-----TGA--AK----V-HSVGRVIIFYFFGLANSKISIIPYLTG 248 (250)
Q Consensus 214 ~~-----~g~--~k----~-~~~~kvlp~l~~ki~~~~vr~VPv~~g 248 (250)
++ +|. ++ + ++++|++.....+++.||+| ||+++|
T Consensus 209 ~i~~~~~~ghrHt~EE~k~~~e~~kilg~~~~~v~ft~vr-vPv~rG 254 (344)
T 3tz6_A 209 LAGSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVR-VPVFTG 254 (344)
T ss_dssp CCSCBCSSSSCCBHHHHHHHHHHHHHHTCTTCEEEEECCB-CSCSSC
T ss_pred cccccccCCCcCCHHHHHHHHHHHHhcCCCCCceEEEEEE-eceece
Confidence 85 244 33 2 56778885434589999999 999998
No 37
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=100.00 E-value=2.9e-36 Score=278.23 Aligned_cols=216 Identities=19% Similarity=0.193 Sum_probs=159.2
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+| +|.+|+.++|+|.+||+++++.+... .+. -.++...| +|. . .. .+.-+++.+.+. +
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~-~sa-----Gk~~~~~~-p~~-~-----~~-~~~~~~~~~~v~-~ 71 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK-GSV-----GKPYGEVV-RWQ-T-----VG-QVPKEIADMEIK-P 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES-TTT-----TSBHHHHC-CCC-S-----SS-CCCHHHHTCBCE-E
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc-hhc-----CCChhHhc-ccc-c-----cc-ccccccccceEE-e
Confidence 48999999 99999999999999999999988533 010 00011110 010 0 00 000000112222 1
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC---CCCeEEeecCccccCC--C--------CCE
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---DAPMFVVGVNEKEYKP--E--------LDI 151 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~---d~p~iV~gVN~~~~~~--~--------~~I 151 (250)
.+++. |. ++|+||+|+|.+.+++.++.|+++|++.|-+|++.. ++|+++||||++.++. . .+|
T Consensus 72 ~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpk_A 72 TDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 23333 32 899999999999999999999999994333344432 5899999999999853 1 259
Q ss_pred EecCChhhhhHHHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCC-cch-hhhhhhcc
Q 025639 152 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGA-AKV-HSVGRVII 229 (250)
Q Consensus 152 Is~~sCtT~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~-~k~-~~~~kvlp 229 (250)
||||||+|+|++++|+||+++|||+++.|+|+|++||+|+. +.+ .+.+++|++|+.++. .|+ .|++|+|+
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~Ei~kil~ 219 (359)
T 4dpk_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKEIFRILS 219 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCSS--CSB------GGGTTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999765 221 247899999999876 343 68999999
Q ss_pred ccCC----------ceeEEEEeeceecccc
Q 025639 230 FYFF----------GLANSKISIIPYLTGS 249 (250)
Q Consensus 230 ~l~~----------ki~~~~vr~VPv~~g~ 249 (250)
++++ +++++|+| ||+++|+
T Consensus 220 ~l~g~~~~~~~~~~~v~~t~~r-VPv~rG~ 248 (359)
T 4dpk_A 220 EVKRNVDEPKLEDVSLAATTHR-IATIHGH 248 (359)
T ss_dssp TSCCSCCCSCGGGCEEEEEEEE-CSCSSCE
T ss_pred hcccccccccccCCceEEEEEE-ecccccE
Confidence 8765 89999999 9999996
No 38
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=100.00 E-value=1.3e-35 Score=273.86 Aligned_cols=209 Identities=11% Similarity=0.134 Sum_probs=163.4
Q ss_pred CC-ceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEE
Q 025639 4 DK-KIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (250)
Q Consensus 4 ~m-~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v 81 (250)
.| ++||||+| ||+|||.++|+|.++|+++++++++. .+. -++|++.||+|. +.+ . . .+.+
T Consensus 13 ~M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~-~~~-----g~~~~~~~~~~~-~~v-~--~-dl~~------- 74 (359)
T 1xyg_A 13 PEKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTAD-RKA-----GQSMESVFPHLR-AQK-L--P-TLVS------- 74 (359)
T ss_dssp --CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCS-TTT-----TSCHHHHCGGGT-TSC-C--C-CCBC-------
T ss_pred cccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCc-hhc-----CCCHHHhCchhc-Ccc-c--c-ccee-------
Confidence 35 38999999 99999999999999999999999985 222 267899999887 322 0 1 1222
Q ss_pred EecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC---CC------------------CeEEee-
Q 025639 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---DA------------------PMFVVG- 139 (250)
Q Consensus 82 ~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~---d~------------------p~iV~g- 139 (250)
+ + ++ .|+ ++|+||+|+|.+.+++.++.| ++|+ +||+++++ +. |.+++|
T Consensus 75 -~--~-~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~--~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygv 144 (359)
T 1xyg_A 75 -V--K-DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTAL--KIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGL 144 (359)
T ss_dssp -G--G-GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTC--EEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECC
T ss_pred -c--c-hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCC--EEEECCccccCCchhhhhhhhcCCcCChhhcCCceEEC
Confidence 1 1 22 575 899999999999999999999 9998 57877764 22 344555
Q ss_pred --cCccccCCCCCEEecCChhhhhHHHHHHHHHhhcCee--EEEEEeeeccCCccc-cccCCCCCCcccccccccccccC
Q 025639 140 --VNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQK-TVDGPSMKDWRGGRAASFNIIPS 214 (250)
Q Consensus 140 --VN~~~~~~~~~IIs~~sCtT~~la~~l~~L~~~fgI~--~~~vtTiha~s~~q~-~~D~~~~~d~~~~r~~~~NiiP~ 214 (250)
+|++.++. .+|||||||+|||++|+|+||+++|+|+ ++.|+|+|++||+|+ ..|+++ .+ .+..|++|+
T Consensus 145 pE~n~~~i~~-~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~-~~-----~~~~ni~py 217 (359)
T 1xyg_A 145 TEILREDIKK-ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEANL-YS-----EIAEGISSY 217 (359)
T ss_dssp HHHHHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGGGB-HH-----HHTTCCEEC
T ss_pred CccCHHHhcc-CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchhhh-hH-----HHhcCeecc
Confidence 59999984 6899999999999999999999999999 999999999999987 466443 22 357899999
Q ss_pred CCCCcch-----hhhhhhccccCCceeEEEEeeceecccc
Q 025639 215 STGAAKV-----HSVGRVIIFYFFGLANSKISIIPYLTGS 249 (250)
Q Consensus 215 ~~g~~k~-----~~~~kvlp~l~~ki~~~~vr~VPv~~g~ 249 (250)
..+..+. ++++|++.+ +.+++++|+| ||+++|+
T Consensus 218 ~~~~h~h~pEi~~~l~~~~~~-~~~v~~t~~r-vP~~~G~ 255 (359)
T 1xyg_A 218 GVTRHRHVPEIEQGLSDVAQS-KVTVSFTPHL-MPMIRGM 255 (359)
T ss_dssp SCSCCTHHHHHHHHHHHHHTS-CCCCEEECEE-ESSSSCE
T ss_pred cccccccHHHHHHHHHHhcCC-CCCEEEEEEE-ecccceE
Confidence 8875441 455666543 4589999999 9999996
No 39
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=100.00 E-value=2.9e-36 Score=278.23 Aligned_cols=216 Identities=19% Similarity=0.193 Sum_probs=159.2
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+| +|.+|+.++|+|.+||+++++.+... .+. -.++...| +|. . .. .+.-+++.+.+. +
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~-~sa-----Gk~~~~~~-p~~-~-----~~-~~~~~~~~~~v~-~ 71 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK-GSV-----GKPYGEVV-RWQ-T-----VG-QVPKEIADMEIK-P 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES-TTT-----TSBHHHHC-CCC-S-----SS-CCCHHHHTCBCE-E
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc-hhc-----CCChhHhc-ccc-c-----cc-ccccccccceEE-e
Confidence 48999999 99999999999999999999988533 010 00011110 010 0 00 000000112222 1
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC---CCCeEEeecCccccCC--C--------CCE
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---DAPMFVVGVNEKEYKP--E--------LDI 151 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~---d~p~iV~gVN~~~~~~--~--------~~I 151 (250)
.+++. |. ++|+||+|+|.+.+++.++.|+++|++.|-+|++.. ++|+++||||++.++. . .+|
T Consensus 72 ~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpl_A 72 TDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 23333 32 899999999999999999999999994333344432 5899999999999853 1 259
Q ss_pred EecCChhhhhHHHHHHHHHhhcCeeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCC-cch-hhhhhhcc
Q 025639 152 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGA-AKV-HSVGRVII 229 (250)
Q Consensus 152 Is~~sCtT~~la~~l~~L~~~fgI~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~-~k~-~~~~kvlp 229 (250)
||||||+|+|++++|+||+++|||+++.|+|+|++||+|+. +.+ .+.+++|++|+.++. .|+ .|++|+|+
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~Ei~kil~ 219 (359)
T 4dpl_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKEIFRILS 219 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCSS--CSB------HHHHTTCCEECCHHHHHHHHHHHHHHHT
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999765 221 247899999999876 343 68999999
Q ss_pred ccCC----------ceeEEEEeeceecccc
Q 025639 230 FYFF----------GLANSKISIIPYLTGS 249 (250)
Q Consensus 230 ~l~~----------ki~~~~vr~VPv~~g~ 249 (250)
++++ +++++|+| ||+++|+
T Consensus 220 ~l~g~~~~~~~~~~~v~~t~~r-VPv~rG~ 248 (359)
T 4dpl_A 220 EVKRNVDEPKLEDVSLAATTHR-IATIHGH 248 (359)
T ss_dssp TSCCSSCCSCGGGCEEEEECEE-CSCSSCE
T ss_pred hcccccccccccCCceEEEEEE-ecccccE
Confidence 8765 89999999 9999996
No 40
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=100.00 E-value=3.8e-35 Score=269.46 Aligned_cols=201 Identities=14% Similarity=0.038 Sum_probs=158.3
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+| ||+|||.++|+|.++|+++++++++. .+. -.+|++.|++|. +. . .+. +.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~-~~~-----g~~~~~~~~~~~-g~-----~-~~~-------~~-- 61 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSR-RFA-----GEPVHFVHPNLR-GR-----T-NLK-------FV-- 61 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCS-TTT-----TSBGGGTCGGGT-TT-----C-CCB-------CB--
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECc-hhh-----CchhHHhCchhc-Cc-----c-ccc-------cc--
Confidence 48999999 99999999999999999999999875 222 256888888776 21 1 121 21
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC---C--------------------CCeEEeecC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---D--------------------APMFVVGVN 141 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~---d--------------------~p~iV~gVN 141 (250)
+++ .|. ++|+||+|+|.+.+++.++.|+++|++ ||+.+++ + .|+.+||+|
T Consensus 62 -~~~--~~~--~vDvV~~a~g~~~s~~~a~~~~~aG~~--VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n 134 (345)
T 2ozp_A 62 -PPE--KLE--PADILVLALPHGVFAREFDRYSALAPV--LVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELY 134 (345)
T ss_dssp -CGG--GCC--CCSEEEECCCTTHHHHTHHHHHTTCSE--EEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHH
T ss_pred -chh--Hhc--CCCEEEEcCCcHHHHHHHHHHHHCCCE--EEEcCccccCCChHHHHhhhccccchhhhccCcEeccccC
Confidence 222 373 899999999999999999999999983 6666553 1 344555669
Q ss_pred ccccCCCCCEEecCChhhhhHHHHHHHHHhhcCee--EEEEEeeeccCCccc-cccCCCCCCcccccccccccccCCCCC
Q 025639 142 EKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQK-TVDGPSMKDWRGGRAASFNIIPSSTGA 218 (250)
Q Consensus 142 ~~~~~~~~~IIs~~sCtT~~la~~l~~L~~~fgI~--~~~vtTiha~s~~q~-~~D~~~~~d~~~~r~~~~NiiP~~~g~ 218 (250)
++.++. .++||||||+|+|++|+|+||+++|+|+ ++.|+|+|++||+|+ ..|.++ .+ .+..|++|+.++.
T Consensus 135 ~~~i~~-~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~-~~-----~~~~n~~py~~~~ 207 (345)
T 2ozp_A 135 REALKG-ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPASH-HP-----ERAGSIRVYKPTG 207 (345)
T ss_dssp HHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGGC-HH-----HHTTCCEEEECSC
T ss_pred HHHhhc-CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCcccccccc-ch-----hhccccccCCCCC
Confidence 999985 6899999999999999999999999999 999999999999985 456443 12 3578999998774
Q ss_pred cchhhhhhhccccC-----C-ceeEEEEeeceecccc
Q 025639 219 AKVHSVGRVIIFYF-----F-GLANSKISIIPYLTGS 249 (250)
Q Consensus 219 ~k~~~~~kvlp~l~-----~-ki~~~~vr~VPv~~g~ 249 (250)
. +++||++ + +++++|+| ||+++|+
T Consensus 208 h------~~~pei~~~l~~~~~v~~~~~r-vP~~~g~ 237 (345)
T 2ozp_A 208 H------RHTAEVVENLPGRPEVHLTAIA-TDRVRGI 237 (345)
T ss_dssp C------THHHHHHHTSSSCCCEEEEEEE-CSCSSCE
T ss_pred c------cChHhHHHHhCCCCCeEEEEEE-eccccEE
Confidence 3 3445543 5 89999999 9999996
No 41
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=100.00 E-value=6.4e-35 Score=270.96 Aligned_cols=217 Identities=22% Similarity=0.274 Sum_probs=158.2
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+| +|.+|++++|+|.+||+++|+.+..+..+. -.+|...| +|- .+..|..+++.+.+. +
T Consensus 19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~sa-----Gk~~~~~~-~~~-------~~~~~p~~~~~~~v~-~ 84 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSA-----GKKYKDAA-SWK-------QTETLPETEQDIVVQ-E 84 (381)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTT-----TSBHHHHC-CCC-------CSSCCCHHHHTCBCE-E
T ss_pred ccEEEEECCCChHHHHHHHHHHcCCCceEEEeecccccc-----CCCHHHhc-ccc-------cccccccccccceEE-e
Confidence 48999999 999999999999999999998774220000 00011111 111 000011111122232 2
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-----CCCeEEeecCccccC-------------
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYK------------- 146 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-----d~p~iV~gVN~~~~~------------- 146 (250)
.++++ .|+ ++|+||+|+|.+.+++.++.++++|+ .||+++++ |+|++++++|++.|.
T Consensus 85 ~~~~~-~~~--~~Dvvf~alp~~~s~~~~~~~~~~G~--~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~~~~ 159 (381)
T 3hsk_A 85 CKPEG-NFL--ECDVVFSGLDADVAGDIEKSFVEAGL--AVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAVSKG 159 (381)
T ss_dssp SSSCT-TGG--GCSEEEECCCHHHHHHHHHHHHHTTC--EEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHHHTT
T ss_pred Cchhh-hcc--cCCEEEECCChhHHHHHHHHHHhCCC--EEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhcccc
Confidence 23331 344 89999999999999999999999999 56777764 479999999999885
Q ss_pred --CCCCEEecCChhhhhHHHHHHHHHhhcC-eeEEEEEeeeccCCccccccCCCCCCcccccccccccccCCCCC-cch-
Q 025639 147 --PELDIVSNASCTTNCLAPLAKVIHDKFG-IVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGA-AKV- 221 (250)
Q Consensus 147 --~~~~IIs~~sCtT~~la~~l~~L~~~fg-I~~~~vtTiha~s~~q~~~D~~~~~d~~~~r~~~~NiiP~~~g~-~k~- 221 (250)
...+||+||||+|+|++++|+||+++|| |+++.++|+|++||+++... ...+.+++|++|+..+. .|+
T Consensus 160 ~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~~~-------~~~~~~~~N~~Py~~~~e~k~~ 232 (381)
T 3hsk_A 160 GKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFSPG-------VSGMDILDNIVPYISGEEDKLE 232 (381)
T ss_dssp CCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC-------------CCHHHHTTCCBCCCTTHHHHHH
T ss_pred cccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCccCC-------cchhhhhcChhhcccchHHHHH
Confidence 2456999999999999999999999999 99999999999999975211 12347899999999876 343
Q ss_pred hhhhhhccccCC-------------ceeEEEEeeceecccc
Q 025639 222 HSVGRVIIFYFF-------------GLANSKISIIPYLTGS 249 (250)
Q Consensus 222 ~~~~kvlp~l~~-------------ki~~~~vr~VPv~~g~ 249 (250)
.|++|+|+.+++ +++++|+| ||+++|.
T Consensus 233 ~Ei~kiL~~l~~~~~~~~~~~~~~~~v~ft~~r-VPv~rG~ 272 (381)
T 3hsk_A 233 WETKKILGGVNAEGTEFVPIPESEMKVSAQCNR-VPVIDGH 272 (381)
T ss_dssp HHHHHHTCEECTTSSSEECCCTTTCEEEEECCB-CSCSSCC
T ss_pred HHHHHHhhhcccccccccccccCCCceEEEEEE-eceeccE
Confidence 689999987665 89999999 9999996
No 42
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=99.97 E-value=7.9e-32 Score=248.02 Aligned_cols=213 Identities=13% Similarity=0.059 Sum_probs=162.0
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCC-----CceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEE
Q 025639 6 KIKIGING-FGRIGRLVARVALQRD-----DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPV 79 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~-----~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i 79 (250)
++||+|+| +|++|+.++|.|.+++ ++++++++.. .+.. .++++.|++|. +. . .+.+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~-~~ag-----k~~~~~~~~l~-~~-----~-~~~~----- 70 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAA-TSAG-----STLGEHHPHLT-PL-----A-HRVV----- 70 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEES-SCTT-----SBGGGTCTTCG-GG-----T-TCBC-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECC-CcCC-----Cchhhhccccc-cc-----c-eeee-----
Confidence 37999999 9999999999999999 8999999754 1111 12466666654 11 1 1211
Q ss_pred EEEecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC--C-C--------------CeEEeec--
Q 025639 80 AVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK--D-A--------------PMFVVGV-- 140 (250)
Q Consensus 80 ~v~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~--d-~--------------p~iV~gV-- 140 (250)
. +.+++ .|. ++|+||+|+|.+.+++.++.+ ++|++.+.+|++.. | . |+.+||+
T Consensus 71 --~-~~~~~--~~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~ 142 (352)
T 2nqt_A 71 --E-PTEAA--VLG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPG 142 (352)
T ss_dssp --E-ECCHH--HHT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTT
T ss_pred --c-cCCHH--Hhc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEeccccc
Confidence 1 11222 254 799999999999999999999 99984333344432 2 2 8889999
Q ss_pred CccccCCCCCEEecCChhhhhHHHHHHHHHhhcCee-EEEEEeeeccCCc-cccccCCCCCCccccccccccccc-CCCC
Q 025639 141 NEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIV-EGLMTTVHSITAT-QKTVDGPSMKDWRGGRAASFNIIP-SSTG 217 (250)
Q Consensus 141 N~~~~~~~~~IIs~~sCtT~~la~~l~~L~~~fgI~-~~~vtTiha~s~~-q~~~D~~~~~d~~~~r~~~~NiiP-~~~g 217 (250)
|.+.++ +.++|+||+|+|+|++++|+||+++++|+ ++.++|+|++||+ |+..|+++ .+++..+..++|++| +.+
T Consensus 143 n~~~i~-~~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~~~-~~~~~~~~~ay~~~~~h~h- 219 (352)
T 2nqt_A 143 ARDQLR-GTRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTDLL-GAEVIGSARAYNIAGVHRH- 219 (352)
T ss_dssp HHHHHT-TCSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGGGS-HHHHTTCCEECSTTTTSTT-
T ss_pred CHHHHh-cCCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCcccccccc-HHHHhhhcccccCCCccee-
Confidence 999998 46899999999999999999999999999 9999999999999 56666544 445566677899988 431
Q ss_pred Ccch-hhhhhhccccCCceeEEEEeeceecccc
Q 025639 218 AAKV-HSVGRVIIFYFFGLANSKISIIPYLTGS 249 (250)
Q Consensus 218 ~~k~-~~~~kvlp~l~~ki~~~~vr~VPv~~g~ 249 (250)
..++ ++++|++. .+.+++.+|+| ||+++|+
T Consensus 220 ~pEi~~e~~ki~~-~~~~v~ft~~r-vP~~rG~ 250 (352)
T 2nqt_A 220 TPEIAQGLRAVTD-RDVSVSFTPVL-IPASRGI 250 (352)
T ss_dssp HHHHHHHHHTTCS-SCCEEEEEEEE-CSCSSCE
T ss_pred cHHHHHHHHHHhC-CCCCEEEEEEE-EccccEE
Confidence 1122 68889986 36799999999 9999996
No 43
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=99.97 E-value=3.3e-31 Score=242.57 Aligned_cols=206 Identities=14% Similarity=0.092 Sum_probs=148.3
Q ss_pred CCceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCE-EEEE
Q 025639 4 DKKIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEK-PVAV 81 (250)
Q Consensus 4 ~m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~-~i~v 81 (250)
+| +||+|+| +|.+|+.++++|.++|+++++++... .+.+. .--++...|..|. |+ .+.+
T Consensus 3 ~M-~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~-~~~~s--aGk~~~~~~p~~~---------------~~~~~~v 63 (337)
T 3dr3_A 3 AM-LNTLIVGASGYAGAELVTYVNRHPHMNITALTVS-AQSND--AGKLISDLHPQLK---------------GIVELPL 63 (337)
T ss_dssp CC-EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEE-TTCTT--TTSBHHHHCGGGT---------------TTCCCBE
T ss_pred Cc-eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEec-Cchhh--cCCchHHhCcccc---------------CccceeE
Confidence 47 7999999 99999999999999999999888543 10000 0000111111111 11 1222
Q ss_pred EecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC----C--CC------------------eEE
Q 025639 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK----D--AP------------------MFV 137 (250)
Q Consensus 82 ~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~----d--~p------------------~iV 137 (250)
....++++ |. .++|+||+|+|.+.+++.++.|+++|+ .||+.+++ | +| ..+
T Consensus 64 ~~~~~~~~--~~-~~~Dvvf~a~p~~~s~~~~~~~~~~g~--~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vygl 138 (337)
T 3dr3_A 64 QPMSDISE--FS-PGVDVVFLATAHEVSHDLAPQFLEAGC--VVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGL 138 (337)
T ss_dssp EEESSGGG--TC-TTCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECC
T ss_pred eccCCHHH--Hh-cCCCEEEECCChHHHHHHHHHHHHCCC--EEEEcCCccccCCcccchhhccccccChhhhcceEEEc
Confidence 21102332 31 279999999999999999999999999 45666553 2 22 146
Q ss_pred eecCccccCCCCCEEecCChhhhhHHHHHHHHHh--hcCeeEE-EEEeeeccCCcc-ccccCCCCCCccccccccccccc
Q 025639 138 VGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHD--KFGIVEG-LMTTVHSITATQ-KTVDGPSMKDWRGGRAASFNIIP 213 (250)
Q Consensus 138 ~gVN~~~~~~~~~IIs~~sCtT~~la~~l~~L~~--~fgI~~~-~vtTiha~s~~q-~~~D~~~~~d~~~~r~~~~NiiP 213 (250)
||+|.+.+.. .+|||||||+|+|++++|+||++ .|+++++ .|+|+|++||++ +..|+.+ .+.+ |++|
T Consensus 139 PEvn~~~i~~-~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~~-~~~~-------n~~p 209 (337)
T 3dr3_A 139 AEWCGNKLKE-ANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNS-FCEV-------SLQP 209 (337)
T ss_dssp TTTCCHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTTS-GGGC-------SEEE
T ss_pred cccCHHHhCC-CCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCcccccccc-cccc-------ceEc
Confidence 6669999974 78999999999999999999999 6999999 999999999996 5666444 2322 9999
Q ss_pred CCCCCcchhhhhhhccccCC----ceeEEEEeeceecccc
Q 025639 214 SSTGAAKVHSVGRVIIFYFF----GLANSKISIIPYLTGS 249 (250)
Q Consensus 214 ~~~g~~k~~~~~kvlp~l~~----ki~~~~vr~VPv~~g~ 249 (250)
+..+.. +.+||+.. +++.+|+| ||+++|+
T Consensus 210 y~~~~h------~h~Pei~~~l~~~v~ft~~r-vPv~rG~ 242 (337)
T 3dr3_A 210 YGVFTH------RHQPEIATHLGADVIFTPHL-GNFPRGI 242 (337)
T ss_dssp CSTTTC------THHHHHHHHHTSCCEEEEEE-ESSSSCE
T ss_pred cCcccc------eechhHHhhhcCCEEEEEEE-ecccccE
Confidence 887643 34566555 89999999 9999996
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.95 E-value=7.5e-29 Score=227.80 Aligned_cols=206 Identities=12% Similarity=0.105 Sum_probs=154.1
Q ss_pred CCceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 4 DKKIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 4 ~m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
|| +||||+| +|.+|++++|+|.+||++||+.+... .+ .-.+|++.|..|. +.+.+.
T Consensus 12 ~~-~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~-~~-----aG~~~~~~~p~~~----------------~~l~~~ 68 (351)
T 1vkn_A 12 HM-IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR-TY-----AGKKLEEIFPSTL----------------ENSILS 68 (351)
T ss_dssp CC-EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS-TT-----TTSBHHHHCGGGC----------------CCCBCB
T ss_pred ce-eEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCc-cc-----ccCChHHhChhhc----------------cCceEE
Confidence 46 8999999 99999999999999999999998753 11 1122344443221 112221
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC---CC--------------------CeEEee
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---DA--------------------PMFVVG 139 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~---d~--------------------p~iV~g 139 (250)
+.+++++ |. ++|+||+|+|...+++.++.+ +|+ +|||++++ +. |..+||
T Consensus 69 -~~~~~~~-~~--~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE 140 (351)
T 1vkn_A 69 -EFDPEKV-SK--NCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPE 140 (351)
T ss_dssp -CCCHHHH-HH--HCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHH
T ss_pred -eCCHHHh-hc--CCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCc
Confidence 1123322 23 799999999999999998877 787 79999875 22 788899
Q ss_pred cCccccCCCCCEEecCChhhhhHHHHHHHHHhhcCee--EEEEEeeeccCCccc-cccCCCCCCcccccccccccccCCC
Q 025639 140 VNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQK-TVDGPSMKDWRGGRAASFNIIPSST 216 (250)
Q Consensus 140 VN~~~~~~~~~IIs~~sCtT~~la~~l~~L~~~fgI~--~~~vtTiha~s~~q~-~~D~~~~~d~~~~r~~~~NiiP~~~ 216 (250)
+|.+.+.. .++|+||+|+|+++++.|+||+++++|+ ++.++|+|++||+++ ..+..+ ...+..|+.|+..
T Consensus 141 ~n~e~i~~-a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~~~~------~~e~~~n~~~y~~ 213 (351)
T 1vkn_A 141 LHREEIKN-AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKVDYL------FSEVNESLRPYNV 213 (351)
T ss_dssp HHHHHHTT-CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSCCSGGGB------HHHHTTCCEECSC
T ss_pred cCHHHhcc-CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCcccccccc------hhHHhcccccCCc
Confidence 99999874 5899999999999999999999999999 999999999999965 333211 1244567777765
Q ss_pred CCcc----h-hhhhhhccccCCceeEEEEeeceecccc
Q 025639 217 GAAK----V-HSVGRVIIFYFFGLANSKISIIPYLTGS 249 (250)
Q Consensus 217 g~~k----~-~~~~kvlp~l~~ki~~~~vr~VPv~~g~ 249 (250)
+.-+ + ++++|++.. ..+++.||+| ||+++|-
T Consensus 214 ~~h~h~pEi~~el~~i~~~-~~~v~ftp~r-vPv~rG~ 249 (351)
T 1vkn_A 214 AKHRHVPEMEQELGKISGK-KVNVVFTPHL-VPMTRGI 249 (351)
T ss_dssp SCCTHHHHHHHHHHHHHTS-CCEEEEEEEE-ESSSSCE
T ss_pred cccccHHHHHHHHHHhhCC-CCCEEEEEEE-eccccEE
Confidence 5323 1 677888753 4589999999 9999984
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.58 E-value=2.5e-07 Score=83.37 Aligned_cols=153 Identities=16% Similarity=0.194 Sum_probs=97.0
Q ss_pred ceeEEEEcCChHHHHHHHHHHc-CCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGRLVARVALQ-RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~-~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+|+|.||+.+++.+.+ ++.++++++.|. +++.. ..+....+| ... ..++ +
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~--~~~~~--~~~~a~~~g----~~~-~~~~--~------------ 60 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGI--DAASD--GLARAQRMG----VTT-TYAG--V------------ 60 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECS--CTTCH--HHHHHHHTT----CCE-ESSH--H------------
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeC--Chhhh--HHHHHHHcC----CCc-ccCC--H------------
Confidence 4899999999999999999976 788999999987 33210 000000111 000 0000 0
Q ss_pred CCC-CCCCcccCCccEEEeecCCCCCHHHHHHHHHC--CCCEEEEeCCCCCCCeEEeecCccccCC--CCCEEecCChhh
Q 025639 85 RNP-EEIPWAKTGAEYVVESTGVFTDKDKAAAHLKG--GAKKVVISAPSKDAPMFVVGVNEKEYKP--ELDIVSNASCTT 159 (250)
Q Consensus 85 ~~p-~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~--Gak~vvis~~s~d~p~iV~gVN~~~~~~--~~~IIs~~sCtT 159 (250)
++. ++.+| .++|+||+|||.....+.+...+++ |. .|+.-.|..-.|..++++|.+.+.. ...+++++.|.+
T Consensus 61 e~ll~~~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk-~Vi~ekp~~~g~~~~p~v~~~~~~~~~~~~lva~~g~~~ 137 (312)
T 1nvm_B 61 EGLIKLPEF--ADIDFVFDATSASAHVQNEALLRQAKPGI-RLIDLTPAAIGPYCVPVVNLEEHLGKLNVNMVTCGGQAT 137 (312)
T ss_dssp HHHHHSGGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTC-EEEECSTTCSSCBCCHHHHTTTTTTCSEEECCCHHHHHH
T ss_pred HHHHhccCC--CCCcEEEECCChHHHHHHHHHHHHhCCCC-EEEEcCcccccccccCccCHHHHHhccCCcEEEeCCccc
Confidence 000 11112 2789999999988888999999998 85 4433334322577788889887642 235777777754
Q ss_pred hhHHHHHHHHHhhcCeeEE-EEEeeeccC
Q 025639 160 NCLAPLAKVIHDKFGIVEG-LMTTVHSIT 187 (250)
Q Consensus 160 ~~la~~l~~L~~~fgI~~~-~vtTiha~s 187 (250)
.|++..+.+.+..... .+.++++.+
T Consensus 138 ---ipl~~a~~~~~~~~~~~iv~~i~sgs 163 (312)
T 1nvm_B 138 ---IPMVAAVSRVAKVHYAEIVASISSKS 163 (312)
T ss_dssp ---HHHHHHHHTTSCEEEEEEEEEEEGGG
T ss_pred ---chHHHHhhhhccchhHhHhhhhhccc
Confidence 4666667777765533 567887776
No 46
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.01 E-value=1.2e-05 Score=72.21 Aligned_cols=89 Identities=19% Similarity=0.257 Sum_probs=64.2
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
++||||+|+|++|+.+++.+.++++++++++.|. +++. . + + + | +.++ .
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~--~~~~--~-~-----------~-----------~-g--v~~~--~ 50 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSR--RATL--D-T-----------K-----------T-P--VFDV--A 50 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEES--SSCC--S-S-----------S-----------S-C--EEEG--G
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcC--CHHH--h-h-----------c-----------C-C--Ccee--C
Confidence 4899999999999999999998888999999886 1110 0 0 0 0 1 1222 2
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+.+++. .++|+|++|++.....+.+..++++|. .||++.|.
T Consensus 51 d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp~ 91 (320)
T 1f06_A 51 DVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYDN 91 (320)
T ss_dssp GGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCCC
T ss_pred CHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCCC
Confidence 333332 278999999999888888889999985 66676654
No 47
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.96 E-value=1.1e-05 Score=72.02 Aligned_cols=89 Identities=20% Similarity=0.256 Sum_probs=61.3
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
++||||+|+|.||+.+++.+.+++++++++|.|. +++.... +| +.+ ..+ .
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~--~~~~~~~-------~g--------------~~~-----~~~--~ 58 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRR--NPAEVPF-------EL--------------QPF-----RVV--S 58 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------------CC--------------TTS-----CEE--S
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHH-------cC--------------CCc-----CCH--H
Confidence 4899999999999999999998888999999886 3321110 01 000 001 1
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCC
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~ 129 (250)
+..+. .++|+|+.||+.....+.+..++++|. .|+...|
T Consensus 59 ~l~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~ekP 97 (304)
T 3bio_A 59 DIEQL----ESVDVALVCSPSREVERTALEILKKGI-CTADSFD 97 (304)
T ss_dssp SGGGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEECCC
T ss_pred HHHhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEECCC
Confidence 22222 278999999999989999999999985 5555434
No 48
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.92 E-value=2.3e-05 Score=71.18 Aligned_cols=85 Identities=21% Similarity=0.281 Sum_probs=58.6
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCC--------CceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCE
Q 025639 6 KIKIGINGFGRIGRLVARVALQRD--------DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEK 77 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~--------~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~ 77 (250)
++||||+|+|.||+.+++.+.+++ ++++++|.+. +++ ...+ ++ .. .
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~--~~~---------~~~~-~~-------~~--~----- 56 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVR--DPR---------KPRA-IP-------QE--L----- 56 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECS--CTT---------SCCS-SC-------GG--G-----
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEEC--CHH---------Hhhc-cC-------cc--c-----
Confidence 489999999999999999998876 6899999886 221 0000 00 00 0
Q ss_pred EEEEEecCCCCCCCcccCCccEEEeecCCCC-CHHHHHHHHHCCCCEEEE
Q 025639 78 PVAVFGFRNPEEIPWAKTGAEYVVESTGVFT-DKDKAAAHLKGGAKKVVI 126 (250)
Q Consensus 78 ~i~v~~~~~p~~i~w~~~~vdiV~~~tg~~~-~~~~a~~~~~~Gak~vvi 126 (250)
++ .|++++- ++|+|++||+... ..+++..++++|. .||.
T Consensus 57 ---~~--~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGK-hVVt 96 (332)
T 2ejw_A 57 ---LR--AEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGI-PLIT 96 (332)
T ss_dssp ---EE--SSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTC-CEEE
T ss_pred ---cc--CCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCC-eEEE
Confidence 11 2455554 6899999998763 4567778999995 4444
No 49
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.86 E-value=2.9e-05 Score=70.23 Aligned_cols=34 Identities=29% Similarity=0.432 Sum_probs=30.8
Q ss_pred ceeEEEEcCChHHHHHHHHHHcC------CCceEEEeeCC
Q 025639 6 KIKIGINGFGRIGRLVARVALQR------DDVELVAVNDP 39 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~------~~~~vvaind~ 39 (250)
++||||+|+|.||+.+++.+.++ ++++|++|.|.
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~ 43 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDS 43 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECS
T ss_pred eEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEec
Confidence 48999999999999999999875 57999999987
No 50
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.80 E-value=4.1e-05 Score=68.37 Aligned_cols=95 Identities=26% Similarity=0.318 Sum_probs=66.9
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
|++||||+|+|.+|+..++.+.+.+.+++++|.|. +++....+.+ .+| + + +
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~--------------~-----~---~-- 52 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVADA--FPAAAEAIAG---AYG--------------C-----E---V-- 52 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---HTT--------------C-----E---E--
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC--CHHHHHHHHH---HhC--------------C-----C---c--
Confidence 67999999999999999999998888999999987 5543222210 000 0 0 1
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++-.|.
T Consensus 53 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 96 (331)
T 4hkt_A 53 RTIDAI-EAAADIDAVVICTPTDTHADLIERFARAG-KAIFCEKPI 96 (331)
T ss_dssp CCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred CCHHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcC-CcEEEecCC
Confidence 012211 11226899999999999999999999999 577776663
No 51
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.80 E-value=4.9e-05 Score=68.78 Aligned_cols=34 Identities=38% Similarity=0.679 Sum_probs=31.5
Q ss_pred CceeEEEEcCChHHHHHHHHHHcC--------CCceEEEeeCC
Q 025639 5 KKIKIGINGFGRIGRLVARVALQR--------DDVELVAVNDP 39 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~--------~~~~vvaind~ 39 (250)
| +||||+|+|.||+.+++.+.++ ++++|++|.|.
T Consensus 2 m-irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~ 43 (327)
T 3do5_A 2 M-IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADS 43 (327)
T ss_dssp C-EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECS
T ss_pred c-EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeC
Confidence 5 8999999999999999999887 78999999987
No 52
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.78 E-value=5.1e-05 Score=71.45 Aligned_cols=92 Identities=18% Similarity=0.253 Sum_probs=61.3
Q ss_pred ceeEEEEcCChHHHHHHHHHHcC---------CCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECC
Q 025639 6 KIKIGINGFGRIGRLVARVALQR---------DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGE 76 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~---------~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g 76 (250)
++||||+|+|.||+.+++.+.++ +++++++|.+. +++....++ + + ..
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~--~~~~~~~~~---------~--------~-~~---- 65 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR--NLDKAEALA---------G--------G-LP---- 65 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS--CHHHHHHHH---------T--------T-CC----
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC--CHHHhhhhc---------c--------c-Cc----
Confidence 48999999999999999887642 57999999987 443211111 0 0 00
Q ss_pred EEEEEEecCCCCCCCcccCCccEEEeecCC-CCCHHHHHHHHHCCCCEEEEeCC
Q 025639 77 KPVAVFGFRNPEEIPWAKTGAEYVVESTGV-FTDKDKAAAHLKGGAKKVVISAP 129 (250)
Q Consensus 77 ~~i~v~~~~~p~~i~w~~~~vdiV~~~tg~-~~~~~~a~~~~~~Gak~vvis~~ 129 (250)
++ .|++++ ..+.++|+|++||+. ....+.+..++++|. .|+..+|
T Consensus 66 ----~~--~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvtenk 111 (444)
T 3mtj_A 66 ----LT--TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK-HVVTANK 111 (444)
T ss_dssp ----EE--SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEECCH
T ss_pred ----cc--CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEECCc
Confidence 11 122221 112378999999986 677788899999994 6655555
No 53
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.76 E-value=4.5e-05 Score=68.52 Aligned_cols=97 Identities=27% Similarity=0.369 Sum_probs=67.2
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
|++||||+|+|.+|+..++.+.+.+++++++|.|. +++....+. ..+|. . .++.
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~---~~~~~----------~----------~~~~- 54 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMIDDAILYAISDV--REDRLREMK---EKLGV----------E----------KAYK- 54 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS--CHHHHHHHH---HHHTC----------S----------EEES-
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHH---HHhCC----------C----------ceeC-
Confidence 67899999999999999999988888999999987 554332221 11110 0 0111
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 55 -~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 97 (344)
T 3ezy_A 55 -DPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAK-KHVFCEKPL 97 (344)
T ss_dssp -SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESCS
T ss_pred -CHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcC-CeEEEECCC
Confidence 12221 11226899999999998889999999999 577777664
No 54
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.72 E-value=3.4e-05 Score=69.64 Aligned_cols=97 Identities=20% Similarity=0.308 Sum_probs=65.8
Q ss_pred CceeEEEEcCChHHH-HHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEe
Q 025639 5 KKIKIGINGFGRIGR-LVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 5 m~~kVaI~G~G~IGr-~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~ 83 (250)
|++||||+|+|.+|+ ..++++.+.+.++|++|.|.. ..+..+. +| |. . + . +++
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~--~~----~~-~--------~--~-------~~~- 54 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAA--PF----KE-K--------G--V-------NFT- 54 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHH--HH----HT-T--------T--C-------EEE-
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHH--hh----CC-C--------C--C-------eEE-
Confidence 779999999999998 677888777889999999872 1111110 01 10 0 1 0 111
Q ss_pred cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 84 ~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 55 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 98 (349)
T 3i23_A 55 -ADLNELL-TDPEIELITICTPAHTHYDLAKQAILAG-KSVIVEKPF 98 (349)
T ss_dssp -SCTHHHH-SCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred -CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEECCC
Confidence 1233321 1236899999999999999999999999 577776663
No 55
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.72 E-value=4.4e-06 Score=73.85 Aligned_cols=157 Identities=25% Similarity=0.264 Sum_probs=86.2
Q ss_pred CC-ceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEE
Q 025639 4 DK-KIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (250)
Q Consensus 4 ~m-~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v 81 (250)
.| ++||+|+| +|++||.+++++.++++++|+++-|...+.. .|+-. +.+ . + +.- | +.+
T Consensus 4 ~M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~-----------~G~d~-gel--~-g--~~~-g--v~v 63 (272)
T 4f3y_A 4 SMSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQ-----------LGQDA-GAF--L-G--KQT-G--VAL 63 (272)
T ss_dssp --CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTT-----------TTSBT-TTT--T-T--CCC-S--CBC
T ss_pred CccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccc-----------ccccH-HHH--h-C--CCC-C--cee
Confidence 35 38999999 9999999999999999999999877621110 01100 000 0 0 000 1 122
Q ss_pred EecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCCCCeEEeecCcccc------CCCCCEEec-
Q 025639 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEY------KPELDIVSN- 154 (250)
Q Consensus 82 ~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d~p~iV~gVN~~~~------~~~~~IIs~- 154 (250)
+ .|++++. .++|+|||+|......+.++.++++|. .+|+.+..- +.+.+ .....++-+
T Consensus 64 ~--~dl~~ll---~~~DVVIDfT~p~a~~~~~~~al~~G~-~vVigTTG~---------s~~~~~~L~~aa~~~~vv~a~ 128 (272)
T 4f3y_A 64 T--DDIERVC---AEADYLIDFTLPEGTLVHLDAALRHDV-KLVIGTTGF---------SEPQKAQLRAAGEKIALVFSA 128 (272)
T ss_dssp B--CCHHHHH---HHCSEEEECSCHHHHHHHHHHHHHHTC-EEEECCCCC---------CHHHHHHHHHHTTTSEEEECS
T ss_pred c--CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCC-CEEEECCCC---------CHHHHHHHHHHhccCCEEEEC
Confidence 2 1333221 158999999977777788888899996 455633221 11211 112334443
Q ss_pred -CChhhhhHHHHHHHHHhhcCe-eEEEEEeeeccCCccccccCCCCC
Q 025639 155 -ASCTTNCLAPLAKVIHDKFGI-VEGLMTTVHSITATQKTVDGPSMK 199 (250)
Q Consensus 155 -~sCtT~~la~~l~~L~~~fgI-~~~~vtTiha~s~~q~~~D~~~~~ 199 (250)
=|=-.|-|.-+++-.-+.|+= -.+.|.-.|-- +| .|.|++.
T Consensus 129 N~s~Gv~l~~~~~~~aa~~l~~~~diei~E~HH~---~K-~DaPSGT 171 (272)
T 4f3y_A 129 NMSVGVNVTMKLLEFAAKQFAQGYDIEIIEAHHR---HK-VDAPSGT 171 (272)
T ss_dssp CCCHHHHHHHHHHHHHHHHTSSSCEEEEEEEECT---TC-CSSSCHH
T ss_pred CCCHHHHHHHHHHHHHHHhcCcCCCEEEEEecCC---CC-CCCCCHH
Confidence 344455555555555555531 14556666643 22 3666543
No 56
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.70 E-value=3.1e-05 Score=70.10 Aligned_cols=34 Identities=26% Similarity=0.454 Sum_probs=30.2
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCC-------CceEEEeeCC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRD-------DVELVAVNDP 39 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~-------~~~vvaind~ 39 (250)
++||||+|+|.||+.+++.+.+++ ++++++|.|.
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~ 46 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADS 46 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECS
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEEC
Confidence 489999999999999999988754 5999999886
No 57
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.69 E-value=8.4e-05 Score=66.74 Aligned_cols=98 Identities=20% Similarity=0.257 Sum_probs=67.7
Q ss_pred CceeEEEEcCChHHHHHHHHHH-cCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEe
Q 025639 5 KKIKIGINGFGRIGRLVARVAL-QRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~-~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~ 83 (250)
|++||||+|+|.+|+..++.+. ..+.+++++|.|. +++....+. ..+| + ...++.
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~--~~~~~~~~~---~~~g--------------~-----~~~~~~ 56 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV--NQEAAQKVV---EQYQ--------------L-----NATVYP 56 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS--SHHHHHHHH---HHTT--------------C-----CCEEES
T ss_pred CeEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHH---HHhC--------------C-----CCeeeC
Confidence 6799999999999999999998 6678999999987 554322221 1111 0 001111
Q ss_pred cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 84 ~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+++++- .+.++|+|+-||+.....+.+..++++| |.|++--|.
T Consensus 57 --~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~EKP~ 99 (344)
T 3mz0_A 57 --NDDSLL-ADENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCEKPL 99 (344)
T ss_dssp --SHHHHH-HCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred --CHHHHh-cCCCCCEEEECCCchhHHHHHHHHHHCC-CcEEEcCCC
Confidence 222211 1126899999999999999999999999 577776664
No 58
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.68 E-value=0.00014 Score=65.86 Aligned_cols=92 Identities=24% Similarity=0.353 Sum_probs=65.4
Q ss_pred eeEEEEcCChHHHH-HHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 7 IKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 7 ~kVaI~G~G~IGr~-~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
+||||+|+|.+|+. .++++...++++|++|.|. +++..+.. | . + . +++ .
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~--~-------~--------~--~-------~~~--~ 55 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS--RTEEVKRD--F-------P--------D--A-------EVV--H 55 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS--CHHHHHHH--C-------T--------T--S-------EEE--S
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHhh--C-------C--------C--C-------ceE--C
Confidence 89999999999997 6888887788999999987 44432110 1 1 0 0 111 1
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 56 ~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 98 (358)
T 3gdo_A 56 ELEEIT-NDPAIELVIVTTPSGLHYEHTMACIQAG-KHVVMEKPM 98 (358)
T ss_dssp STHHHH-TCTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEESSC
T ss_pred CHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEecCC
Confidence 232221 1237899999999999999999999999 577776664
No 59
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.66 E-value=8.3e-05 Score=66.71 Aligned_cols=95 Identities=23% Similarity=0.357 Sum_probs=66.8
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
++||||+|+|.+|+..++.+.+.+++++++|.|. +++....+. ..+| ..++.
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a---~~~g---------------------~~~~~-- 55 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADP--FIEGAQRLA---EANG---------------------AEAVA-- 55 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHH---HTTT---------------------CEEES--
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHH---HHcC---------------------CceeC--
Confidence 4899999999999999999998888999999887 554322221 0011 01111
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+++++- .+.++|+|+-||+.....+.+..++++| |.|++..|.
T Consensus 56 ~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 98 (344)
T 3euw_A 56 SPDEVF-ARDDIDGIVIGSPTSTHVDLITRAVERG-IPALCEKPI 98 (344)
T ss_dssp SHHHHT-TCSCCCEEEECSCGGGHHHHHHHHHHTT-CCEEECSCS
T ss_pred CHHHHh-cCCCCCEEEEeCCchhhHHHHHHHHHcC-CcEEEECCC
Confidence 222211 1236899999999999999999999999 467776663
No 60
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.65 E-value=1.2e-05 Score=71.67 Aligned_cols=97 Identities=22% Similarity=0.188 Sum_probs=61.9
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEe
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~ 83 (250)
|++||+|+| +|++||.+++++.++++++|+++-|...+. ..-.|. |.+. + +.-.| +.++
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~-----~~G~d~--gel~--------G--~~~~g--v~v~- 79 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSS-----FVDKDA--SILI--------G--SDFLG--VRIT- 79 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCT-----TTTSBG--GGGT--------T--CSCCS--CBCB-
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcc-----ccccch--HHhh--------c--cCcCC--ceee-
Confidence 458999999 999999999999999999999998762111 000110 1111 0 00011 2222
Q ss_pred cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEE
Q 025639 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVI 126 (250)
Q Consensus 84 ~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvi 126 (250)
.|++++. .++|+|+|+|......+.++.+++.|. .+|+
T Consensus 80 -~dl~~ll---~~aDVvIDFT~p~a~~~~~~~~l~~Gv-~vVi 117 (288)
T 3ijp_A 80 -DDPESAF---SNTEGILDFSQPQASVLYANYAAQKSL-IHII 117 (288)
T ss_dssp -SCHHHHT---TSCSEEEECSCHHHHHHHHHHHHHHTC-EEEE
T ss_pred -CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCC-CEEE
Confidence 2343322 168999999977666778888899997 4555
No 61
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.62 E-value=0.0001 Score=66.27 Aligned_cols=96 Identities=17% Similarity=0.177 Sum_probs=63.4
Q ss_pred CceeEEEEcCChHHHH-HHH-HHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 5 KKIKIGINGFGRIGRL-VAR-VALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~-~lr-~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
|++||||+|+|.+|+. .++ ++...+.+++++|.|. +++.....- ++. + . +++
T Consensus 1 m~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~--~~~~~~~~~-------~~~--------~--~-------~~~ 54 (345)
T 3f4l_A 1 MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRR--HAKPEEQAP-------IYS--------H--I-------HFT 54 (345)
T ss_dssp -CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECS--SCCGGGGSG-------GGT--------T--C-------EEE
T ss_pred CceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcC--CHhHHHHHH-------hcC--------C--C-------ceE
Confidence 6799999999999996 677 5566678999999987 222111000 000 1 1 112
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.+++++- .+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 55 --~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 98 (345)
T 3f4l_A 55 --SDLDEVL-NDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLVEKPF 98 (345)
T ss_dssp --SCTHHHH-TCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred --CCHHHHh-cCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEeCCC
Confidence 1333321 1236899999999999999999999999 577776554
No 62
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.62 E-value=8.6e-05 Score=69.91 Aligned_cols=109 Identities=16% Similarity=0.277 Sum_probs=64.9
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhcccccccc-CCCcceEEeCC-eeeE---ECCEEEE
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQ-WKHNELKVKDE-KTLL---FGEKPVA 80 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~-~~~~~v~~~~~-~~l~---~~g~~i~ 80 (250)
++||||+|+|++|+.+++.+...+.+++++|.|. +++......+ ..||. |. +...++ ..+. -.+ .+.
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~--~~era~~~a~--~~yG~~~~---~~~~~~~~~i~~a~~~g-~~~ 94 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARMQGIEVGALSAR--RLPNTFKAIR--TAYGDEEN---AREATTESAMTRAIEAG-KIA 94 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECS--STHHHHHHHH--HHHSSSTT---EEECSSHHHHHHHHHTT-CEE
T ss_pred ceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeC--CHHHHHHHHH--HhcCCccc---cccccchhhhhhhhccC-Cce
Confidence 4899999999999999999888888999999997 5554333321 00121 11 111000 0000 001 122
Q ss_pred EEecCCCCCCCcccCCccEEEeecCCC-CCHHHHHHHHHCCCCEEEE
Q 025639 81 VFGFRNPEEIPWAKTGAEYVVESTGVF-TDKDKAAAHLKGGAKKVVI 126 (250)
Q Consensus 81 v~~~~~p~~i~w~~~~vdiV~~~tg~~-~~~~~a~~~~~~Gak~vvi 126 (250)
++. |.+++ ..+.++|+|++|||.. ...+.+..++++|. .|++
T Consensus 95 v~~--D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK-HVv~ 137 (446)
T 3upl_A 95 VTD--DNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK-HLVM 137 (446)
T ss_dssp EES--CHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC-EEEE
T ss_pred EEC--CHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC-cEEe
Confidence 331 33322 1233799999999863 45678889999994 5543
No 63
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.59 E-value=9.1e-05 Score=66.75 Aligned_cols=95 Identities=21% Similarity=0.241 Sum_probs=66.4
Q ss_pred ceeEEEEcCChHHHHHHHHHHcC-CCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGRLVARVALQR-DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~-~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+|+|.+|+..++.+.+. +.+++++|.|. +++....+.+ .+| + .++.
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~~~---~~~--------------~-------~~~~- 65 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDI--DPAALKAAVE---RTG--------------A-------RGHA- 65 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS--SHHHHHHHHH---HHC--------------C-------EEES-
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC--CHHHHHHHHH---HcC--------------C-------ceeC-
Confidence 48999999999999999999987 78999999987 5543222210 011 0 1111
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+++++ ..+.++|+|+-||+.....+.+...+++| |.|++-.|.
T Consensus 66 -~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 108 (354)
T 3q2i_A 66 -SLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAG-FHVMTEKPM 108 (354)
T ss_dssp -CHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred -CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeCCC
Confidence 22222 11237899999999998889999999999 577776663
No 64
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.59 E-value=0.00011 Score=65.71 Aligned_cols=97 Identities=22% Similarity=0.222 Sum_probs=66.1
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCC--CceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRD--DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~--~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
|++||||+|+|.||+..++.+.+.+ ++++++|.|. +++....+. ..||. + + ++
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~--~~~~a~~~a---~~~~~-~----~---------------~~ 55 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR--DLSRAKEFA---QKHDI-P----K---------------AY 55 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS--SHHHHHHHH---HHHTC-S----C---------------EE
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC--CHHHHHHHH---HHcCC-C----c---------------cc
Confidence 6799999999999999999988765 4899999987 554322221 11110 0 0 01
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
. +.+++- .+.++|+|+-||+.....+.+..++++| |.|++--|.
T Consensus 56 ~--~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP~ 99 (334)
T 3ohs_X 56 G--SYEELA-KDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKPM 99 (334)
T ss_dssp S--SHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred C--CHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCC
Confidence 0 121111 1236899999999999999999999999 577887664
No 65
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.58 E-value=0.00016 Score=65.73 Aligned_cols=93 Identities=23% Similarity=0.332 Sum_probs=64.8
Q ss_pred ceeEEEEcCChHHHH-HHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~-~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+|+|.+|+. .++++.+.++++|++|.|. +++.... + +. + . +++.
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~--~-------~~--------~--~-------~~~~- 57 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR--DEEKVKR--D-------LP--------D--V-------TVIA- 57 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHHH--H-------CT--------T--S-------EEES-
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHh--h-------CC--------C--C-------cEEC-
Confidence 489999999999996 7888888888999999987 5543221 0 11 1 0 0111
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+.+++- .+.++|+|+-||+.....+.+..++++| |.|++--|-
T Consensus 58 -~~~~ll-~~~~~D~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKPl 100 (364)
T 3e82_A 58 -SPEAAV-QHPDVDLVVIASPNATHAPLARLALNAG-KHVVVDKPF 100 (364)
T ss_dssp -CHHHHH-TCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred -CHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEeCCC
Confidence 222211 1236899999999999999999999999 467776563
No 66
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.58 E-value=0.00016 Score=65.43 Aligned_cols=92 Identities=24% Similarity=0.371 Sum_probs=64.8
Q ss_pred eeEEEEcCChHHHH-HHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 7 IKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 7 ~kVaI~G~G~IGr~-~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
+||||+|+|.+|+. .++++.+.++++|++|.|. +++..+ . +|. + ++++ .
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~------~---~~~--------~---------~~~~--~ 55 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVER--SKELSK------E---RYP--------Q---------ASIV--R 55 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECS--SCCGGG------T---TCT--------T---------SEEE--S
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHH------H---hCC--------C---------CceE--C
Confidence 89999999999997 7888888888999999987 332111 0 010 0 0111 1
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 56 ~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP~ 98 (362)
T 3fhl_A 56 SFKELT-EDPEIDLIVVNTPDNTHYEYAGMALEAG-KNVVVEKPF 98 (362)
T ss_dssp CSHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred CHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEecCC
Confidence 233221 1236999999999999999999999999 577776664
No 67
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.56 E-value=0.00019 Score=64.58 Aligned_cols=95 Identities=16% Similarity=0.177 Sum_probs=66.8
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
++||||+|+|.+|+..++.+.+.+.+++++|.|. +++....+.+ .+|- + .+ .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~--~~~~~~~~~~---~~g~-~--------------------~~--~ 56 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR--TEDKREKFGK---RYNC-A--------------------GD--A 56 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS--SHHHHHHHHH---HHTC-C--------------------CC--S
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HcCC-C--------------------Cc--C
Confidence 5899999999999999999998878999999987 5543322210 0110 0 00 0
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+++++ ..+.++|+|+-||+.....+.+...+++| |.|++..|.
T Consensus 57 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP~ 99 (354)
T 3db2_A 57 TMEAL-LAREDVEMVIITVPNDKHAEVIEQCARSG-KHIYVEKPI 99 (354)
T ss_dssp SHHHH-HHCSSCCEEEECSCTTSHHHHHHHHHHTT-CEEEEESSS
T ss_pred CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CEEEEccCC
Confidence 11111 11236899999999999999999999999 577777664
No 68
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.55 E-value=0.00014 Score=64.91 Aligned_cols=95 Identities=17% Similarity=0.220 Sum_probs=64.6
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~ 86 (250)
+||||+|+|.+|+.+++.+.+.+++++++|.|. +++.... +... . |.+ .++ .+
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~--~~~~~~~-----------------~a~~--~---~~~-~~~--~~ 58 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSR--TLESAQA-----------------FANK--Y---HLP-KAY--DK 58 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECS--CSSTTCC--------------------C--C---CCS-CEE--SC
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHH-----------------HHHH--c---CCC-ccc--CC
Confidence 799999999999999999988778999999886 3221100 0000 0 000 011 12
Q ss_pred CCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 87 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 87 p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 59 ~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 100 (329)
T 3evn_A 59 LEDML-ADESIDVIYVATINQDHYKVAKAALLAG-KHVLVEKPF 100 (329)
T ss_dssp HHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred HHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEEccCC
Confidence 22221 1236899999999998999999999999 477777774
No 69
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.54 E-value=0.00013 Score=64.68 Aligned_cols=93 Identities=18% Similarity=0.252 Sum_probs=65.4
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
++||||+|+|.+|+.+++.+.+.+.++++++.|. +++.... +. . . +.++.
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~--~~~~~~~----------~~--------~-~-------~~~~~-- 59 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASS--NPDNLAL----------VP--------P-G-------CVIES-- 59 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES--CHHHHTT----------CC--------T-T-------CEEES--
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHH----------HH--------h-h-------CcccC--
Confidence 5899999999999999999998878999999887 4432111 11 1 1 11221
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+++++- .+.++|+|+.||+.....+.+...+++| |.|++..|.
T Consensus 60 ~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~eKP~ 102 (315)
T 3c1a_A 60 DWRSVV-SAPEVEAVIIATPPATHAEITLAAIASG-KAVLVEKPL 102 (315)
T ss_dssp STHHHH-TCTTCCEEEEESCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred CHHHHh-hCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEcCCC
Confidence 233221 1236899999999988888998999999 466776554
No 70
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.54 E-value=0.00023 Score=64.09 Aligned_cols=93 Identities=25% Similarity=0.400 Sum_probs=65.7
Q ss_pred ceeEEEEcCChHHHH-HHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~-~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+|+|.+|+. .++++.+.++++|++|.|. +++... -+ +. + . +++
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~--~~~~~~--~~-------~~--------~--~-------~~~-- 56 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS--DASKVH--AD-------WP--------A--I-------PVV-- 56 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHH--TT-------CS--------S--C-------CEE--
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC--CHHHHH--hh-------CC--------C--C-------ceE--
Confidence 489999999999997 7888888888999999987 554222 00 11 0 0 011
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.+.+++- .+.++|+|+-||+.....+.+..++++| |.|++--|-
T Consensus 57 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKPl 100 (352)
T 3kux_A 57 SDPQMLF-NDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKPF 100 (352)
T ss_dssp SCHHHHH-HCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSSC
T ss_pred CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECCC
Confidence 1222221 1236899999999999999999999999 577776663
No 71
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.53 E-value=0.00018 Score=63.93 Aligned_cols=94 Identities=22% Similarity=0.278 Sum_probs=65.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~ 86 (250)
+||||+|+|.+|+.+++.+.+.+.+++++|.|. +++....+. ..+| + ..++ .+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~--~~~~~~~~~---~~~~--------------~------~~~~--~~ 54 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR--KLETAATFA---SRYQ--------------N------IQLF--DQ 54 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECS--SHHHHHHHG---GGSS--------------S------CEEE--SC
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHH---HHcC--------------C------CeEe--CC
Confidence 799999999999999999988878999999886 444222111 1011 0 0111 12
Q ss_pred CCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 87 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 87 p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
++++- +.++|+|+.||+.....+.+..++++| |.|++-.|.
T Consensus 55 ~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~g-k~V~~EKP~ 95 (325)
T 2ho3_A 55 LEVFF--KSSFDLVYIASPNSLHFAQAKAALSAG-KHVILEKPA 95 (325)
T ss_dssp HHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred HHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcC-CcEEEecCC
Confidence 33322 237899999999988888999999999 467776554
No 72
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.52 E-value=0.00015 Score=62.96 Aligned_cols=33 Identities=30% Similarity=0.576 Sum_probs=29.7
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|||+|+| +|++||.+++++.++++++++++-|.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence 4899999 79999999999988878999998765
No 73
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.51 E-value=0.00022 Score=63.74 Aligned_cols=96 Identities=18% Similarity=0.259 Sum_probs=64.1
Q ss_pred ceeEEEEcCChHHHHHHHHHH-cCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGRLVARVAL-QRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~-~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+|+|.+|+..++.+. +.+.+++++|.|. +++....+. ..+| . . .++.
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~--~~~~~~~~a---~~~g----~------~----------~~~~- 61 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACAL--DSNQLEWAK---NELG----V------E----------TTYT- 61 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECS--CHHHHHHHH---HTTC----C------S----------EEES-
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecC--CHHHHHHHH---HHhC----C------C----------cccC-
Confidence 489999999999999999988 6677999999887 454322211 0011 0 0 0111
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+.+++- .+.++|+|+.||+.....+.+...+++| |.|++..|.
T Consensus 62 -~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~eKp~ 104 (346)
T 3cea_A 62 -NYKDMI-DTENIDAIFIVAPTPFHPEMTIYAMNAG-LNVFCEKPL 104 (346)
T ss_dssp -CHHHHH-TTSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSCC
T ss_pred -CHHHHh-cCCCCCEEEEeCChHhHHHHHHHHHHCC-CEEEEcCCC
Confidence 122111 1126899999999988889999999999 466665453
No 74
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.50 E-value=0.00024 Score=63.65 Aligned_cols=96 Identities=20% Similarity=0.205 Sum_probs=66.0
Q ss_pred ceeEEEEcCChHHHH-HHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~-~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+|+|.||+. ++.++.+.++++|+||.|. +++....+- ..|| .. +++.
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a---~~~g----~~----------------~~y~- 76 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASR--DLTRAREMA---DRFS----VP----------------HAFG- 76 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECS--SHHHHHHHH---HHHT----CS----------------EEES-
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHH---HHcC----CC----------------eeeC-
Confidence 389999999999986 5788888888999999997 555322221 1111 00 0111
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
|.+++ ..+.++|.|+=||+.....+.+..++++| |.|++--|-
T Consensus 77 -d~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKPl 119 (350)
T 4had_A 77 -SYEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAG-KHVVCEKPL 119 (350)
T ss_dssp -SHHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSCC
T ss_pred -CHHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcC-CEEEEeCCc
Confidence 22221 11237899999999999999999999999 477776564
No 75
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.50 E-value=0.00021 Score=63.03 Aligned_cols=94 Identities=18% Similarity=0.230 Sum_probs=64.4
Q ss_pred CCCCC-ceeEEEEcCChHHHHHHHHHHc---CCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECC
Q 025639 1 MAGDK-KIKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGE 76 (250)
Q Consensus 1 ~~~~m-~~kVaI~G~G~IGr~~lr~l~~---~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g 76 (250)
|..+| ++||||+|+|.+|+..++.+.. .+.+++++|.+. +. + ...+ + +.+
T Consensus 1 M~~~~~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~--~~------~--a~~~------------g--~~~-- 54 (294)
T 1lc0_A 1 MITNSGKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSR--RE------L--GSLD------------E--VRQ-- 54 (294)
T ss_dssp CCCCCCSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECS--SC------C--CEET------------T--EEB--
T ss_pred CCCCCCcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECc--hH------H--HHHc------------C--CCC--
Confidence 44444 4899999999999999998876 467999999876 11 0 0000 1 110
Q ss_pred EEEEEEecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 77 KPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 77 ~~i~v~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.+.+++- .+.++|+|+.||+.....+.+...+++| |.|++--|.
T Consensus 55 --------~~~~ell-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 98 (294)
T 1lc0_A 55 --------ISLEDAL-RSQEIDVAYICSESSSHEDYIRQFLQAG-KHVLVEYPM 98 (294)
T ss_dssp --------CCHHHHH-HCSSEEEEEECSCGGGHHHHHHHHHHTT-CEEEEESCS
T ss_pred --------CCHHHHh-cCCCCCEEEEeCCcHhHHHHHHHHHHCC-CcEEEeCCC
Confidence 1222221 1237999999999999999999999999 467776564
No 76
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.48 E-value=0.00026 Score=64.06 Aligned_cols=98 Identities=23% Similarity=0.243 Sum_probs=66.7
Q ss_pred CceeEEEEcCChHHHHHHHHHH-cCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEe
Q 025639 5 KKIKIGINGFGRIGRLVARVAL-QRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~-~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~ 83 (250)
|++||||+|+|.+|+..++.+. ..+.+++++|.|. +++....+. ..+| + ...++.
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a---~~~g--------------~-----~~~~~~ 77 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI--VAGRAQAAL---DKYA--------------I-----EAKDYN 77 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS--STTHHHHHH---HHHT--------------C-----CCEEES
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC--CHHHHHHHH---HHhC--------------C-----CCeeeC
Confidence 3589999999999999999998 6678999999987 333221111 0111 0 001111
Q ss_pred cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 84 ~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+.+++- .+.++|+|+-||+.....+.+..++++| |.|++--|.
T Consensus 78 --~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKPl 120 (357)
T 3ec7_A 78 --DYHDLI-NDKDVEVVIITASNEAHADVAVAALNAN-KYVFCEKPL 120 (357)
T ss_dssp --SHHHHH-HCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred --CHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecCc
Confidence 222211 1226899999999999999999999999 577777674
No 77
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.46 E-value=0.00012 Score=62.49 Aligned_cols=134 Identities=19% Similarity=0.237 Sum_probs=78.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~ 86 (250)
|||||+|+|++|+.+++.+.+ +.++++++.|.. .+ . . . .+ .+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~-~g~~lv~v~d~~--~~---------------------~--~-~---------~~--~~ 42 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLER-NGFEIAAILDVR--GE---------------------H--E-K---------MV--RG 42 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEECSS--CC---------------------C--T-T---------EE--SS
T ss_pred CEEEEECCCHHHHHHHHHHhc-CCCEEEEEEecC--cc---------------------h--h-h---------hc--CC
Confidence 489999999999999999884 569998887761 00 0 0 1 11 12
Q ss_pred CCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC-CCCeEEeecCccccCC-CCCEEecCChhhhhHHH
Q 025639 87 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAPMFVVGVNEKEYKP-ELDIVSNASCTTNCLAP 164 (250)
Q Consensus 87 p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~-d~p~iV~gVN~~~~~~-~~~IIs~~sCtT~~la~ 164 (250)
++++-- .++|+|++|++.....+.+..++++|. .|++..|.. +.+-...++- +.... ...+.-.+++... ..
T Consensus 43 ~~~l~~--~~~DvVv~~~~~~~~~~~~~~~l~~G~-~vv~~~~~~~~~~~~~~~l~-~~a~~~g~~~~i~~~~~g~--~~ 116 (236)
T 2dc1_A 43 IDEFLQ--REMDVAVEAASQQAVKDYAEKILKAGI-DLIVLSTGAFADRDFLSRVR-EVCRKTGRRVYIASGAIGG--LD 116 (236)
T ss_dssp HHHHTT--SCCSEEEECSCHHHHHHHHHHHHHTTC-EEEESCGGGGGSHHHHHHHH-HHHHHHCCCEEECCTTCSC--HH
T ss_pred HHHHhc--CCCCEEEECCCHHHHHHHHHHHHHCCC-cEEEECcccCChHHHHHHHH-HHHHhcCCeEEecCccccC--hH
Confidence 332211 278999999998888888888999996 444433322 1110000110 00111 2233333333322 23
Q ss_pred HHHHHHhhcCeeEEEEEeeecc
Q 025639 165 LAKVIHDKFGIVEGLMTTVHSI 186 (250)
Q Consensus 165 ~l~~L~~~fgI~~~~vtTiha~ 186 (250)
.++.... ++++..++++|..
T Consensus 117 ~~~~~~~--~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 117 AIFSASE--LIEEIVLTTRKNW 136 (236)
T ss_dssp HHHHTGG--GEEEEEEEEEEEG
T ss_pred HHHHhhc--cccEEEEEEEcCh
Confidence 3444433 8999999998876
No 78
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.46 E-value=0.00015 Score=65.50 Aligned_cols=95 Identities=15% Similarity=0.140 Sum_probs=65.9
Q ss_pred ceeEEEEcCChHHH-HHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGR-LVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr-~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+|+|.+|+ .+++.+.+.+.+++++|.|. +++....+. ..+| + ..+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a---~~~g--------------~-------~~~-- 78 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR--RWDRAKRFT---ERFG--------------G-------EPV-- 78 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES--SHHHHHHHH---HHHC--------------S-------EEE--
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC--CHHHHHHHH---HHcC--------------C-------CCc--
Confidence 48999999999998 78999998888999999887 444322211 0011 0 001
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 79 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 122 (350)
T 3rc1_A 79 EGYPALL-ERDDVDAVYVPLPAVLHAEWIDRALRAG-KHVLAEKPL 122 (350)
T ss_dssp ESHHHHH-TCTTCSEEEECCCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCC-CcEEEeCCC
Confidence 1222221 1236899999999999999999999999 467776663
No 79
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.45 E-value=0.00022 Score=61.91 Aligned_cols=32 Identities=34% Similarity=0.570 Sum_probs=30.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|||+|+|+|++||.+++++.++++ +|+++-|.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~ 35 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGH-EIVGVIEN 35 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHHhCCC-EEEEEEec
Confidence 799999999999999999999998 99998776
No 80
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.44 E-value=0.00043 Score=61.47 Aligned_cols=95 Identities=20% Similarity=0.221 Sum_probs=62.8
Q ss_pred CceeEEEEcCChHHHH-HHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEe
Q 025639 5 KKIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~-~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~ 83 (250)
|++||||+|+|.+|+. +++.+.+.+.++++ |.|. +++....+. ..+| +. ..+.
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~--~~~~~~~~a---~~~g--------------~~------~~~~ 54 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTR--NPKVLGTLA---TRYR--------------VS------ATCT 54 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECS--CHHHHHHHH---HHTT--------------CC------CCCS
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeC--CHHHHHHHH---HHcC--------------CC------cccc
Confidence 6789999999999984 88988877779999 8876 554332221 0011 00 0000
Q ss_pred cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 84 ~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
...+.+ +.++|+|+.|++.....+.+...+++|. .|++..|.
T Consensus 55 -~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP~ 96 (323)
T 1xea_A 55 -DYRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGI-PTFVDKPL 96 (323)
T ss_dssp -STTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTC-CEEEESCS
T ss_pred -CHHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCC-eEEEeCCC
Confidence 011222 2378999999999888888888999994 56666554
No 81
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.43 E-value=0.00011 Score=67.27 Aligned_cols=96 Identities=22% Similarity=0.295 Sum_probs=67.4
Q ss_pred CceeEEEEcCC-hHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEe
Q 025639 5 KKIKIGINGFG-RIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 5 m~~kVaI~G~G-~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~ 83 (250)
|++||||+|+| .+|+..++.+...+.+++++|.|. +++....+. ..|| + +++.
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a---~~~g--------------~-------~~~~ 54 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDP--NEDVRERFG---KEYG--------------I-------PVFA 54 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECS--CHHHHHHHH---HHHT--------------C-------CEES
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHH---HHcC--------------C-------CeEC
Confidence 67899999999 999999999998888999999987 544322111 0011 0 0111
Q ss_pred cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 84 ~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 55 --~~~ell-~~~~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP~ 97 (387)
T 3moi_A 55 --TLAEMM-QHVQMDAVYIASPHQFHCEHVVQASEQG-LHIIVEKPL 97 (387)
T ss_dssp --SHHHHH-HHSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSCC
T ss_pred --CHHHHH-cCCCCCEEEEcCCcHHHHHHHHHHHHCC-CceeeeCCc
Confidence 222221 1236899999999998889999999999 577776664
No 82
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.42 E-value=0.00015 Score=63.86 Aligned_cols=99 Identities=21% Similarity=0.244 Sum_probs=61.6
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
+|||+|+| +|++||.+++.+.+.++++++++-|. +++ .+...| .|.+. + +.-.| +.++
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~--~~~---~~~g~d--~~~~~--------g--~~~~~--v~~~-- 63 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALER--EGS---SLLGSD--AGELA--------G--AGKTG--VTVQ-- 63 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC--TTC---TTCSCC--TTCSS--------S--SSCCS--CCEE--
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec--Cch---hhhhhh--HHHHc--------C--CCcCC--ceec--
Confidence 38999999 59999999999888888999988775 111 000001 01111 0 00001 2222
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~ 129 (250)
.|++++- . ++|+|+|+|......+.++..+++|. .+|+..+
T Consensus 64 ~dl~~~l-~--~~DvVIDft~p~~~~~~~~~a~~~G~-~vVigTt 104 (273)
T 1dih_A 64 SSLDAVK-D--DFDVFIDFTRPEGTLNHLAFCRQHGK-GMVIGTT 104 (273)
T ss_dssp SCSTTTT-T--SCSEEEECSCHHHHHHHHHHHHHTTC-EEEECCC
T ss_pred CCHHHHh-c--CCCEEEEcCChHHHHHHHHHHHhCCC-CEEEECC
Confidence 2444432 1 68999988877667788888999996 4666333
No 83
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.42 E-value=0.00041 Score=62.78 Aligned_cols=94 Identities=26% Similarity=0.341 Sum_probs=66.6
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
++||||+|+|.+|+..++.+.+.+.+++++|.|. +++.....-+| | + .++ .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~a~~~----g--------------~-------~~~--~ 55 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI--LAEKREAAAQK----G--------------L-------KIY--E 55 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS--SHHHHHHHHTT----T--------------C-------CBC--S
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHhc----C--------------C-------cee--C
Confidence 3899999999999999999988888999999987 55433221111 1 0 001 0
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+.+++ ..+.++|+|+-||+.....+.+..++++| |.|++--|.
T Consensus 56 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP~ 98 (359)
T 3e18_A 56 SYEAV-LADEKVDAVLIATPNDSHKELAISALEAG-KHVVCEKPV 98 (359)
T ss_dssp CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeeCCC
Confidence 12111 11236899999999999999999999999 577777664
No 84
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.41 E-value=0.00028 Score=63.02 Aligned_cols=96 Identities=17% Similarity=0.117 Sum_probs=65.8
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
++||||+|+|.+|+.+++.+.+.+++++++|.|. +++....+. ..+|. + + ++ .
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~---~~~~~-~----~---------------~~--~ 57 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR--RLENAQKMA---KELAI-P----V---------------AY--G 57 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS--SSHHHHHHH---HHTTC-C----C---------------CB--S
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHH---HHcCC-C----c---------------ee--C
Confidence 4899999999999999999998888999999887 443322221 01110 0 0 00 0
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+.+++- .+.++|+|+-||+.....+.+...+++| |.|++-.|.
T Consensus 58 ~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP~ 100 (330)
T 3e9m_A 58 SYEELC-KDETIDIIYIPTYNQGHYSAAKLALSQG-KPVLLEKPF 100 (330)
T ss_dssp SHHHHH-HCTTCSEEEECCCGGGHHHHHHHHHHTT-CCEEECSSC
T ss_pred CHHHHh-cCCCCCEEEEcCCCHHHHHHHHHHHHCC-CeEEEeCCC
Confidence 111111 1226899999999999999999999999 467776663
No 85
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.40 E-value=0.00056 Score=63.74 Aligned_cols=102 Identities=24% Similarity=0.290 Sum_probs=67.5
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhc-cccccccCCCcceEEeCCeeeEECCEEEEEEe-
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFK-YDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG- 83 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~-ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~- 83 (250)
++||||+|+|.+|+..++.+...+.++|++|.|. +++....+.+ +. .+| ++ + .+++.
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~--~~~~~~~~a~~~~-~~g-~~--------~---------~~~~~~ 78 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP--DPYMVGRAQEILK-KNG-KK--------P---------AKVFGN 78 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--CHHHHHHHHHHHH-HTT-CC--------C---------CEEECS
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHHHHHH-hcC-CC--------C---------Cceecc
Confidence 4899999999999999999988888999999987 5553332221 00 011 00 0 01111
Q ss_pred -cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 84 -FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 84 -~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+.+.+++- .+.++|+|+-||+.....+.+..++++|. .|++--|.
T Consensus 79 ~~~~~~~ll-~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~EKP~ 124 (444)
T 2ixa_A 79 GNDDYKNML-KDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGMEVSG 124 (444)
T ss_dssp STTTHHHHT-TCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEECCCC
T ss_pred CCCCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEeCCC
Confidence 01222221 12369999999999988999999999994 67665554
No 86
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.36 E-value=0.00046 Score=61.10 Aligned_cols=93 Identities=18% Similarity=0.267 Sum_probs=62.7
Q ss_pred ceeEEEEcCChHHHH-HHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~-~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+|+|.+|+. +++.+.+.+++++++|.|. +++....+. ..+| + + ++
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~--~~~~~~~~~---~~~g--------------~-----~--~~-- 56 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSP--TRAKALPIC---ESWR--------------I-----P--YA-- 56 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECS--SCTTHHHHH---HHHT--------------C-----C--BC--
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHH---HHcC--------------C-----C--cc--
Confidence 389999999999996 8898888778999999887 332111110 0001 0 0 11
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.+++.+ +.++|+|+.||+.....+.+...+++|. .|++..|.
T Consensus 57 ~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP~ 98 (319)
T 1tlt_A 57 DSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKPL 98 (319)
T ss_dssp SSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESSS
T ss_pred CcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCCC
Confidence 122222 1368999999998888888888999994 66776553
No 87
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.35 E-value=0.00034 Score=61.67 Aligned_cols=93 Identities=19% Similarity=0.240 Sum_probs=64.9
Q ss_pred ceeEEEEcCChHHHH-HHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~-~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+|+|.+|+. +++.+.+.+.+++++|.|. +++....+. ..||. + . +
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a---~~~~~-~-----------~-~---------- 57 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP--NKVKREKIC---SDYRI-M-----------P-F---------- 57 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS--CHHHHHHHH---HHHTC-C-----------B-C----------
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHH---HHcCC-C-----------C-c----------
Confidence 489999999999996 8898888788999999987 554332221 01110 0 0 0
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.+.+++- + ++|+|+-||+.....+.+...+++|. .|++.-|.
T Consensus 58 ~~~~~ll--~-~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP~ 99 (308)
T 3uuw_A 58 DSIESLA--K-KCDCIFLHSSTETHYEIIKILLNLGV-HVYVDKPL 99 (308)
T ss_dssp SCHHHHH--T-TCSEEEECCCGGGHHHHHHHHHHTTC-EEEECSSS
T ss_pred CCHHHHH--h-cCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEcCCC
Confidence 1222211 1 68999999999999999999999994 67776564
No 88
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.34 E-value=0.00036 Score=63.21 Aligned_cols=95 Identities=19% Similarity=0.252 Sum_probs=65.5
Q ss_pred eeEEEEcCChHHHH-HHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 7 IKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 7 ~kVaI~G~G~IGr~-~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
+||||+|+|.+|+. +++++.+.+++++++|.|. +++....+. ..+ . + . .++ .
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a---~~~---~--------~--~-------~~~--~ 58 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDS--DLERARRVH---RFI---S--------D--I-------PVL--D 58 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECS--SHHHHGGGG---GTS---C--------S--C-------CEE--S
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHH---Hhc---C--------C--C-------ccc--C
Confidence 89999999999995 8899988888999999987 554322221 001 0 0 0 011 1
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 59 ~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 101 (359)
T 3m2t_A 59 NVPAML-NQVPLDAVVMAGPPQLHFEMGLLAMSKG-VNVFVEKPP 101 (359)
T ss_dssp SHHHHH-HHSCCSEEEECSCHHHHHHHHHHHHHTT-CEEEECSCS
T ss_pred CHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCC-CeEEEECCC
Confidence 222221 1236899999999988889999999999 467776664
No 89
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.34 E-value=0.00048 Score=51.05 Aligned_cols=97 Identities=14% Similarity=0.215 Sum_probs=59.4
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
|++||+|.|.|.+|+.+++.|.+++..+++.+.. +++.+..+.... +.. +.. ..
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~~~~----------~~~-----~~~--------d~ 57 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADH---DLAALAVLNRMG----------VAT-----KQV--------DA 57 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHHTTT----------CEE-----EEC--------CT
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHHhCC----------CcE-----EEe--------cC
Confidence 4579999999999999999999886578777654 344332222000 000 000 00
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEe
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis 127 (250)
.+++.+.-...++|+||.|+|.......+...++.|.+.+.++
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCC
T ss_pred CCHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEec
Confidence 1111111001278999999998877777778888998654443
No 90
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.33 E-value=0.00017 Score=64.76 Aligned_cols=88 Identities=19% Similarity=0.213 Sum_probs=63.8
Q ss_pred ceeEEEEcCChHHH-HHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGR-LVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr-~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+|+|.||+ ..++++.+.+++++++|.|. +++ + + + + +++.
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~--~~~------~----~------------g--~-------~~~~- 70 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASR--HGT------V----E------------G--V-------NSYT- 70 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECS--SCC------C----T------------T--S-------EEES-
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeC--Chh------h----c------------C--C-------CccC-
Confidence 38999999999999 79999998888999999987 211 0 0 0 1 1111
Q ss_pred CCCCCCCccc-CCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAK-TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~-~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+.+++- .+ .++|+|+-||+.....+.+..++++| |.|++--|.
T Consensus 71 -~~~~ll-~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP~ 114 (330)
T 4ew6_A 71 -TIEAML-DAEPSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLEKPP 114 (330)
T ss_dssp -SHHHHH-HHCTTCCEEEECSCHHHHHHHHHHHHHTT-CEEEECSSS
T ss_pred -CHHHHH-hCCCCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEeCCC
Confidence 222221 11 26899999999988889999999999 577776664
No 91
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.31 E-value=0.00032 Score=65.37 Aligned_cols=100 Identities=13% Similarity=0.115 Sum_probs=66.4
Q ss_pred ceeEEEEcCChHHH-HHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGR-LVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr-~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+|+|.+|+ .+++.+.+.+.+++++|.|. +++....+. ..||. + .. .+.++
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~--~~~~~~~~a---~~~g~-~-------~~--------~~~~~-- 139 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSG--NAEKAKIVA---AEYGV-D-------PR--------KIYDY-- 139 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECS--CHHHHHHHH---HHTTC-C-------GG--------GEECS--
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHH---HHhCC-C-------cc--------ccccc--
Confidence 48999999999997 89998888778999999987 554322211 11110 0 00 01111
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.+.+++- .+.++|+|+.||+.....+.+...+++|. .|++--|.
T Consensus 140 ~~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~EKPl 183 (433)
T 1h6d_A 140 SNFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMCEKPM 183 (433)
T ss_dssp SSGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSSC
T ss_pred CCHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCCC-cEEEcCCC
Confidence 1233332 12368999999999988999999999994 67775554
No 92
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.28 E-value=0.0004 Score=62.67 Aligned_cols=99 Identities=15% Similarity=0.231 Sum_probs=65.8
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
++||||+|+|.+|+.+++.+.+.+.+++++|.|. +++....+. ..+|. + .. ..++.
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~--~~~~~~~~a---~~~~~-~-------~~---------~~~~~-- 61 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASR--SLEKAKAFA---TANNY-P-------ES---------TKIHG-- 61 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHH---HHTTC-C-------TT---------CEEES--
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHH---HHhCC-C-------CC---------CeeeC--
Confidence 4899999999999999999988888999999987 454322211 11110 0 00 01111
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+.+++ ..+.++|+|+.||+.....+.+..++++|. .|++--|.
T Consensus 62 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~EKP~ 104 (362)
T 1ydw_A 62 SYESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKGK-HILLEKPV 104 (362)
T ss_dssp SHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTTC-EEEECSSC
T ss_pred CHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCCC-eEEEecCC
Confidence 22221 111268999999999888899999999994 66665553
No 93
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.28 E-value=0.00041 Score=62.25 Aligned_cols=96 Identities=23% Similarity=0.215 Sum_probs=66.8
Q ss_pred ceeEEEEcCC-hHHHHHHHHHHcC-CCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEe
Q 025639 6 KIKIGINGFG-RIGRLVARVALQR-DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 6 ~~kVaI~G~G-~IGr~~lr~l~~~-~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~ 83 (250)
++||||+|+| .+|+..++.+.+. +.+++++|.|. +++....+. ..||. . .++.
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a---~~~~~-----~---------------~~~~ 72 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR--TRSHAEEFA---KMVGN-----P---------------AVFD 72 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS--SHHHHHHHH---HHHSS-----C---------------EEES
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC--CHHHHHHHH---HHhCC-----C---------------cccC
Confidence 4899999999 8999999999887 78999999987 555332221 11110 0 1111
Q ss_pred cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 84 ~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
|.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 73 --~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 115 (340)
T 1zh8_A 73 --SYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKG-VHVICEKPI 115 (340)
T ss_dssp --CHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred --CHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCC-CcEEEeCCC
Confidence 22211 11236899999999998899999999999 477776664
No 94
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.22 E-value=0.00093 Score=60.04 Aligned_cols=97 Identities=21% Similarity=0.188 Sum_probs=62.1
Q ss_pred C-ceeEEEEcCChHHHHHHHHHHc-------CCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECC
Q 025639 5 K-KIKIGINGFGRIGRLVARVALQ-------RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGE 76 (250)
Q Consensus 5 m-~~kVaI~G~G~IGr~~lr~l~~-------~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g 76 (250)
| ++||||+|+|.||+.-++++.. .+.++|+||.|. +++....+. ..|| ..
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a---~~~g----~~------------- 80 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA--NAGLAEARA---GEFG----FE------------- 80 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC----TTHHHHH---HHHT----CS-------------
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC--CHHHHHHHH---HHhC----CC-------------
Confidence 6 4899999999999987766542 356899999997 443222211 1111 00
Q ss_pred EEEEEEecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 77 KPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 77 ~~i~v~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+++. |.+++ ..+.++|.|+=||+.....+.+..++++| |.|++--|-
T Consensus 81 ---~~y~--d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aG-khVl~EKPl 127 (393)
T 4fb5_A 81 ---KATA--DWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAG-KHVWCEKPM 127 (393)
T ss_dssp ---EEES--CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred ---eecC--CHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcC-CeEEEccCC
Confidence 0111 22221 11236899999999999999999999999 477776664
No 95
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.18 E-value=0.00047 Score=61.94 Aligned_cols=98 Identities=15% Similarity=0.147 Sum_probs=65.8
Q ss_pred CCc-eeEEEEcCChHHHHHHHHHHcCCC-------ceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEEC
Q 025639 4 DKK-IKIGINGFGRIGRLVARVALQRDD-------VELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFG 75 (250)
Q Consensus 4 ~m~-~kVaI~G~G~IGr~~lr~l~~~~~-------~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~ 75 (250)
.|+ +||||+|+|.+|+.-++++...|. .+|++|.|. +++....+. ..|| ..
T Consensus 3 ~M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~--~~~~a~~~a---~~~g----~~------------ 61 (390)
T 4h3v_A 3 AMTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR--DAEAVRAAA---GKLG----WS------------ 61 (390)
T ss_dssp -CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS--SHHHHHHHH---HHHT----CS------------
T ss_pred CCCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC--CHHHHHHHH---HHcC----CC------------
Confidence 364 899999999999998888775543 489999987 555333221 1111 00
Q ss_pred CEEEEEEecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 76 EKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 76 g~~i~v~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+++. |.+++ ..+.++|.|+=||+.....+.+..++++| |.|++--|-
T Consensus 62 ----~~~~--d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKPl 108 (390)
T 4h3v_A 62 ----TTET--DWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAG-KHVLCEKPL 108 (390)
T ss_dssp ----EEES--CHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred ----cccC--CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CCceeecCc
Confidence 0111 22221 11237899999999999999999999999 578876664
No 96
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.17 E-value=0.0004 Score=60.68 Aligned_cols=128 Identities=18% Similarity=0.190 Sum_probs=76.9
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~ 86 (250)
|||++.|||.||+.+++. + ++|++++-+- . . + .+ |- .+. .|
T Consensus 13 ~rV~i~G~GaIG~~v~~~---~-~leLv~v~~~--------------k-----~--------g-el---gv--~a~--~d 53 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL---G-NFEKIYAYDR--------------I-----S--------K-DI---PG--VVR--LD 53 (253)
T ss_dssp CEEEEECCSHHHHHHHHH---S-CCSEEEEECS--------------S-----C--------C-CC---SS--SEE--CS
T ss_pred ceEEEECcCHHHHHHHhc---C-CcEEEEEEec--------------c-----c--------c-cc---Cc--eee--CC
Confidence 699999999999999998 4 6999888541 0 0 1 12 21 122 35
Q ss_pred CCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCC--CCCeEEeecCccccC-----CCCCEEecCChhh
Q 025639 87 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK--DAPMFVVGVNEKEYK-----PELDIVSNASCTT 159 (250)
Q Consensus 87 p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~--d~p~iV~gVN~~~~~-----~~~~IIs~~sCtT 159 (250)
.+++.. +.|+|+||++...-.++.++.|++|+ .|++++..+ | |-+- +.+. ...++ --||-.-
T Consensus 54 ~d~lla---~pD~VVe~A~~~av~e~~~~iL~aG~-dvv~~S~gaLad-~~l~-----~~L~~aA~~gg~~l-~vpSGAi 122 (253)
T 1j5p_A 54 EFQVPS---DVSTVVECASPEAVKEYSLQILKNPV-NYIIISTSAFAD-EVFR-----ERFFSELKNSPARV-FFPSGAI 122 (253)
T ss_dssp SCCCCT---TCCEEEECSCHHHHHHHHHHHTTSSS-EEEECCGGGGGS-HHHH-----HHHHHHHHTCSCEE-ECCCTTC
T ss_pred HHHHhh---CCCEEEECCCHHHHHHHHHHHHHCCC-CEEEcChhhhcC-HHHH-----HHHHHHHHHCCCeE-EecCCcc
Confidence 666652 68999999988766677889999997 444433332 2 1000 1111 11222 1222222
Q ss_pred hhHHHHHHHHHhhcCeeEEEEEeeeccC
Q 025639 160 NCLAPLAKVIHDKFGIVEGLMTTVHSIT 187 (250)
Q Consensus 160 ~~la~~l~~L~~~fgI~~~~vtTiha~s 187 (250)
-+| -.|+... -+|+++.++|+-+-.
T Consensus 123 ~Gl-D~l~aa~--g~l~~V~~~t~K~P~ 147 (253)
T 1j5p_A 123 GGL-DVLSSIK--DFVKNVRIETIKPPK 147 (253)
T ss_dssp CCH-HHHHHHG--GGEEEEEEEEEECGG
T ss_pred cch-hHHHHhc--CCccEEEEEEeCChH
Confidence 222 2233333 689999999887764
No 97
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=97.16 E-value=0.00046 Score=63.81 Aligned_cols=110 Identities=15% Similarity=0.159 Sum_probs=61.3
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCC-ceEEEeeCCCCChhHHhhhhc-cccccccCCCcceEEeCCe---eeE--ECCEE
Q 025639 7 IKIGING-FGRIGRLVARVALQRDD-VELVAVNDPFISTDYMTYMFK-YDSVHGQWKHNELKVKDEK---TLL--FGEKP 78 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~-~~vvaind~~~~~~~~a~ll~-ydS~~G~~~~~~v~~~~~~---~l~--~~g~~ 78 (250)
+||+|+| ||.||+..++.+.++++ |+++++..- .+.+.+....+ |... .+...+.. .+. +.+..
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag-~ni~~l~~~~~~f~~~-------~v~v~d~~~~~~l~~~l~~~~ 76 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN-RNVKDLADAAKRTNAK-------RAVIADPSLYNDLKEALAGSS 76 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES-SCHHHHHHHHHHTTCS-------EEEESCGGGHHHHHHHTTTCS
T ss_pred eEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcC-CCHHHHHHHHHHcCCc-------EEEEcChHHHHHHHHHhccCC
Confidence 7999999 59999999999999886 999988322 35554333221 2110 11111100 000 01111
Q ss_pred EEEEe-cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEe
Q 025639 79 VAVFG-FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (250)
Q Consensus 79 i~v~~-~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis 127 (250)
+.++. +.+..++- .+. +|+|+++++.+...+....++++| |+|+..
T Consensus 77 ~~v~~g~~~~~el~-~~~-iDvVV~ai~G~aGl~ptlaAi~aG-K~VvlA 123 (388)
T 1r0k_A 77 VEAAAGADALVEAA-MMG-ADWTMAAIIGCAGLKATLAAIRKG-KTVALA 123 (388)
T ss_dssp SEEEESHHHHHHHH-TSC-CSEEEECCCSGGGHHHHHHHHHTT-SEEEEC
T ss_pred cEEEeCccHHHHHH-cCC-CCEEEEeCCCHHHHHHHHHHHHCC-CEEEEe
Confidence 12221 11111111 123 899999995566777777889999 455553
No 98
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.08 E-value=0.00085 Score=61.58 Aligned_cols=96 Identities=21% Similarity=0.248 Sum_probs=65.3
Q ss_pred ceeEEEEcCChHHHHHHHHHHcC--------CCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCE
Q 025639 6 KIKIGINGFGRIGRLVARVALQR--------DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEK 77 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~--------~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~ 77 (250)
++||||+|+|.||+..++++.+. +.++|+||.|+ +++....+. ..|| ..
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~--~~~~a~~~a---~~~~----~~-------------- 82 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ--DQAMAERHA---AKLG----AE-------------- 82 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS--SHHHHHHHH---HHHT----CS--------------
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC--CHHHHHHHH---HHcC----CC--------------
Confidence 48999999999999988887653 24799999997 555332221 1111 00
Q ss_pred EEEEEecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 78 PVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 78 ~i~v~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+++. |.+++ ..+.++|.|+=||+.....+.+..++++| |.|++--|-
T Consensus 83 --~~y~--d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP~ 129 (412)
T 4gqa_A 83 --KAYG--DWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAG-KHVYCEKPL 129 (412)
T ss_dssp --EEES--SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESCS
T ss_pred --eEEC--CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcC-CCeEeecCC
Confidence 0111 12221 12237899999999999999999999999 577787774
No 99
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.02 E-value=0.0015 Score=58.06 Aligned_cols=97 Identities=22% Similarity=0.320 Sum_probs=64.2
Q ss_pred CCCceeEEEEcC-ChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEE
Q 025639 3 GDKKIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (250)
Q Consensus 3 ~~m~~kVaI~G~-G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v 81 (250)
++| +||||+|+ |.+|+..++++.+.+ .++++|.|. +++. +. .+.. |+ + .++
T Consensus 1 g~m-irvgiIG~gG~i~~~h~~~l~~~~-~~lvav~d~--~~~~-~~---~~~~---~~--------~---------~~~ 52 (312)
T 3o9z_A 1 GHM-TRFALTGLAGYIAPRHLKAIKEVG-GVLVASLDP--ATNV-GL---VDSF---FP--------E---------AEF 52 (312)
T ss_dssp --C-CEEEEECTTSSSHHHHHHHHHHTT-CEEEEEECS--SCCC-GG---GGGT---CT--------T---------CEE
T ss_pred CCc-eEEEEECCChHHHHHHHHHHHhCC-CEEEEEEcC--CHHH-HH---HHhh---CC--------C---------Cce
Confidence 356 79999998 799999999998874 999999987 2221 10 1110 11 0 011
Q ss_pred EecCCCCCCC-----c--ccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 82 FGFRNPEEIP-----W--AKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 82 ~~~~~p~~i~-----w--~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+. +.+++. | .+.++|+|+-||+.....+.+..++++| |.|++--|.
T Consensus 53 ~~--~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKPl 105 (312)
T 3o9z_A 53 FT--EPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLG-ANALSEKPL 105 (312)
T ss_dssp ES--CHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred eC--CHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCC-CeEEEECCC
Confidence 11 122111 0 2247999999999999999999999999 577776664
No 100
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.01 E-value=0.00022 Score=63.87 Aligned_cols=98 Identities=11% Similarity=0.060 Sum_probs=63.0
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCC--ChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFI--STDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~--~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
|++||||+|+|.+|+..++++ .+.++|++|.|... ..+..+... . .|| + ..+++
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~--~-~~~--------------~-----~~~~~ 56 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAI--S-EMN--------------I-----KPKKY 56 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHH--H-TTT--------------C-----CCEEC
T ss_pred CceEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHH--H-HcC--------------C-----CCccc
Confidence 779999999999999888887 66799999998721 111111111 0 011 0 00111
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.|.+++- .+.++|.|+-||+.....+.+..++++| |.|++--|-
T Consensus 57 --~~~~~ll-~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKPl 100 (337)
T 3ip3_A 57 --NNWWEML-EKEKPDILVINTVFSLNGKILLEALERK-IHAFVEKPI 100 (337)
T ss_dssp --SSHHHHH-HHHCCSEEEECSSHHHHHHHHHHHHHTT-CEEEECSSS
T ss_pred --CCHHHHh-cCCCCCEEEEeCCcchHHHHHHHHHHCC-CcEEEeCCC
Confidence 1222221 1236899999999988888999999999 467776664
No 101
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.97 E-value=0.0011 Score=59.25 Aligned_cols=96 Identities=21% Similarity=0.166 Sum_probs=64.5
Q ss_pred CCceeEEEEcC-ChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 4 DKKIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 4 ~m~~kVaI~G~-G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
+| +||||+|+ |.+|+..++++.+. ..+++++.|. +++. +. .+.. ++ + .+++
T Consensus 2 ~m-irvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~--~~~~-~~---~~~~---~~--------~---------~~~~ 53 (318)
T 3oa2_A 2 HM-KNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDI--NDSV-GI---IDSI---SP--------Q---------SEFF 53 (318)
T ss_dssp -C-CEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECS--SCCC-GG---GGGT---CT--------T---------CEEE
T ss_pred Cc-eEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcC--CHHH-HH---HHhh---CC--------C---------CcEE
Confidence 56 79999998 79999999999887 4999999987 2221 10 1111 11 0 0111
Q ss_pred ecCCCCCCC--------cccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 83 GFRNPEEIP--------WAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 83 ~~~~p~~i~--------w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
. +.+++. ..+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 54 ~--~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKPl 106 (318)
T 3oa2_A 54 T--EFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLG-CDVICEKPL 106 (318)
T ss_dssp S--SHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSSC
T ss_pred C--CHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCC-CeEEEECCC
Confidence 1 122111 01347999999999999999999999999 577776664
No 102
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.86 E-value=0.0027 Score=56.25 Aligned_cols=94 Identities=19% Similarity=0.185 Sum_probs=61.8
Q ss_pred eeEEEEcCChHHHHH-HHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 7 IKIGINGFGRIGRLV-ARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~-lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
|||||+|+|.+|+.+ ++.+.+ +.+++++|.|. +++....+. ..+|.- . ++ .
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~--~~~~~~~~~---~~~g~~---------~-----------~~--~ 52 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMST--SAERGAAYA---TENGIG---------K-----------SV--T 52 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TTCEEEEEECS--CHHHHHHHH---HHTTCS---------C-----------CB--S
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CCCeEEEEECC--CHHHHHHHH---HHcCCC---------c-----------cc--C
Confidence 589999999999997 888877 67999999887 554332221 111100 0 00 0
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+.+++ ..+.++|+|+.||+.....+.+...+++| |.|++-.|.
T Consensus 53 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~ekP~ 95 (332)
T 2glx_A 53 SVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAG-KHVLCEKPL 95 (332)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred CHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCC-CeEEEeCCC
Confidence 11111 01126899999999888888888899999 466665553
No 103
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.69 E-value=0.0006 Score=63.50 Aligned_cols=98 Identities=14% Similarity=0.166 Sum_probs=66.6
Q ss_pred eeEEEEcC----ChHHHHHHHHHHcC-CCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEE
Q 025639 7 IKIGINGF----GRIGRLVARVALQR-DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (250)
Q Consensus 7 ~kVaI~G~----G~IGr~~lr~l~~~-~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v 81 (250)
+||||+|+ |.+|+..++.+.+. +.++|++|.|. +++....+. ..||. + + +.+
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a---~~~g~-~--------~---------~~~ 77 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSP--KIETSIATI---QRLKL-S--------N---------ATA 77 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECS--SHHHHHHHH---HHTTC-T--------T---------CEE
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHH---HHcCC-C--------c---------cee
Confidence 89999999 99999999999988 78999999987 454322211 11110 0 0 011
Q ss_pred EecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCC-----CEEEEeCCC
Q 025639 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVVISAPS 130 (250)
Q Consensus 82 ~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Ga-----k~vvis~~s 130 (250)
+. +.+++- .+.++|+|+-||+.....+.+..++++|. |.|++--|.
T Consensus 78 ~~--~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~ 128 (438)
T 3btv_A 78 FP--TLESFA-SSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWAL 128 (438)
T ss_dssp ES--SHHHHH-HCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSC
T ss_pred eC--CHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcc
Confidence 11 222221 12368999999999888889999999994 577776664
No 104
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=96.63 E-value=0.0025 Score=58.84 Aligned_cols=98 Identities=26% Similarity=0.274 Sum_probs=64.0
Q ss_pred ceeEEEEcCCh---HHHHHHHHHHcCCCceEEE-eeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEE
Q 025639 6 KIKIGINGFGR---IGRLVARVALQRDDVELVA-VNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (250)
Q Consensus 6 ~~kVaI~G~G~---IGr~~lr~l~~~~~~~vva-ind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v 81 (250)
++||||+|+|+ +|+..++++...+.+++++ |.|. +++....+. ..+|.-. .+.
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a---~~~g~~~---~~~--------------- 93 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSS--TPEKAEASG---RELGLDP---SRV--------------- 93 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCS--SHHHHHHHH---HHHTCCG---GGB---------------
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCC--CHHHHHHHH---HHcCCCc---ccc---------------
Confidence 48999999999 9999999888877899997 8876 555332221 1111000 000
Q ss_pred EecCCCCCCCccc-----CCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 82 FGFRNPEEIPWAK-----TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 82 ~~~~~p~~i~w~~-----~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+ .+.+++- .+ .++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 94 ~--~~~~~ll-~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKPl 143 (417)
T 3v5n_A 94 Y--SDFKEMA-IREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRG-IHVICDKPL 143 (417)
T ss_dssp C--SCHHHHH-HHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTT-CEEEEESSS
T ss_pred c--CCHHHHH-hcccccCCCCcEEEECCCcHHHHHHHHHHHhCC-CeEEEECCC
Confidence 0 0111110 01 25899999999999999999999999 477776664
No 105
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.58 E-value=0.0033 Score=55.92 Aligned_cols=95 Identities=15% Similarity=0.193 Sum_probs=60.8
Q ss_pred ceeEEEEcCChHHH-HHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGR-LVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr-~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+|+|.+|. .+++.+. ++.+++++|.|. +++....+- ..|| + . +++
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~-~~~~~lvav~d~--~~~~~~~~a---~~~~-----------~--~-------~~~-- 55 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLI-DAGAELAGVFES--DSDNRAKFT---SLFP-----------S--V-------PFA-- 55 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHH-HTTCEEEEEECS--CTTSCHHHH---HHST-----------T--C-------CBC--
T ss_pred ccEEEEECCChHHHHHhhhhhc-CCCcEEEEEeCC--CHHHHHHHH---HhcC-----------C--C-------ccc--
Confidence 48999999999996 5777775 356999999987 333111111 0010 0 0 001
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 56 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP~ 99 (336)
T 2p2s_A 56 ASAEQL-ITDASIDLIACAVIPCDRAELALRTLDAG-KDFFTAKPP 99 (336)
T ss_dssp SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSSC
T ss_pred CCHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCC-CcEEEeCCC
Confidence 011111 11226899999999999999999999999 467776564
No 106
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.58 E-value=0.0065 Score=55.61 Aligned_cols=135 Identities=16% Similarity=0.214 Sum_probs=81.4
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCC-CceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGRLVARVALQRD-DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~-~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+|+| .|+.-++++.+.+ .++|++|.+. +++-...+ ...|| + +++.
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~--~~~~a~~~---a~~~g--------------v-------~~~~- 58 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQ--GSARSREL---AHAFG--------------I-------PLYT- 58 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECC--SSHHHHHH---HHHTT--------------C-------CEES-
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECC--CHHHHHHH---HHHhC--------------C-------CEEC-
Confidence 4899999999 6999999887765 4999999987 33321111 11111 1 1221
Q ss_pred CCCCCCCcccCCccEEEeecCCCCC----HHHHHHHHHCCCCEEEEeCCCC--------------CCCeEEeecCccccC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTD----KDKAAAHLKGGAKKVVISAPSK--------------DAPMFVVGVNEKEYK 146 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~----~~~a~~~~~~Gak~vvis~~s~--------------d~p~iV~gVN~~~~~ 146 (250)
+.+++. .++|+|+=||..... .+.+...+++| |.|++--|-. ++. +..+-|+..+-
T Consensus 59 -~~~~l~---~~~D~v~i~~p~~~h~~~~~~~a~~al~aG-khVl~EKPl~~~ea~~l~~~A~~~g~~-~~v~~~yr~~p 132 (372)
T 4gmf_A 59 -SPEQIT---GMPDIACIVVRSTVAGGAGTQLARHFLARG-VHVIQEHPLHPDDISSLQTLAQEQGCC-YWINTFYPHTR 132 (372)
T ss_dssp -SGGGCC---SCCSEEEECCC--CTTSHHHHHHHHHHHTT-CEEEEESCCCHHHHHHHHHHHHHHTCC-EEEECSGGGSH
T ss_pred -CHHHHh---cCCCEEEEECCCcccchhHHHHHHHHHHcC-CcEEEecCCCHHHHHHHHHHHHHcCCE-EEEcCcccCCH
Confidence 344443 257888888877665 67888999999 4777766632 344 33344443221
Q ss_pred C-----------------CCCEEecCChhhhhHHHHHHHHHhhcCe
Q 025639 147 P-----------------ELDIVSNASCTTNCLAPLAKVIHDKFGI 175 (250)
Q Consensus 147 ~-----------------~~~IIs~~sCtT~~la~~l~~L~~~fgI 175 (250)
. ....| .+.|+..-+-+.+..|....|.
T Consensus 133 ~vr~~i~~~~~l~~~~~~~~~~i-~~~~s~q~~y~~~dil~~alg~ 177 (372)
T 4gmf_A 133 AGRTWLRDAQQLRRCLAKTPPVV-HATTSRQLLYSTLDLLLLALGV 177 (372)
T ss_dssp HHHHHHHHHHHHHHHHTSCCSEE-EEEECTTTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhhccCCceEE-EEEeccccccchHHHHHHhcCC
Confidence 0 11222 3467777777888777776553
No 107
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=96.52 E-value=0.0025 Score=57.71 Aligned_cols=95 Identities=15% Similarity=0.204 Sum_probs=62.7
Q ss_pred ceeEEEEcCChHHH-HHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGR-LVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr-~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
++||||+|+|.+|+ .++.++. .+.++|++|.|. +++....+. ..||. . .++
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~-~~~~~lvav~d~--~~~~a~~~a---~~~~~----------~----------~~~-- 77 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLL-RAGARLAGFHEK--DDALAAEFS---AVYAD----------A----------RRI-- 77 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHH-HTTCEEEEEECS--CHHHHHHHH---HHSSS----------C----------CEE--
T ss_pred CcEEEEECcCHHHHHHHHHHhh-cCCcEEEEEEcC--CHHHHHHHH---HHcCC----------C----------ccc--
Confidence 48999999999996 4566665 467999999987 555332221 11110 0 011
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 78 ~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKPl 121 (361)
T 3u3x_A 78 ATAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHG-KDVLVDKPG 121 (361)
T ss_dssp SCHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEEESCS
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEeCCC
Confidence 122221 11236899999999988889999999999 577787774
No 108
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.51 E-value=0.0012 Score=59.79 Aligned_cols=93 Identities=19% Similarity=0.192 Sum_probs=57.2
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
+|||.|.|.|.||+.+++.|.++.++.++.+ +.+.+..+.+. . . .+.++ ..
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~-----~~~~~~~~~~~-------~--------~-~~~~d--------~~ 66 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVYIGDV-----NNENLEKVKEF-------A--------T-PLKVD--------AS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEEEEES-----CHHHHHHHTTT-------S--------E-EEECC--------TT
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeEEEEc-----CHHHHHHHhcc-------C--------C-cEEEe--------cC
Confidence 3799999999999999999987654543333 23322222100 0 0 11111 11
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCC
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~ 129 (250)
|++.+.=--.++|+|+.|+|.+....-++..+++|+ -+++.+
T Consensus 67 d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~--~yvD~s 108 (365)
T 3abi_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp CHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTC--EEEECC
T ss_pred CHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCc--ceEeee
Confidence 222111111378999999999988888889999998 567654
No 109
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=96.50 E-value=0.0083 Score=54.97 Aligned_cols=109 Identities=15% Similarity=0.172 Sum_probs=64.1
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhc-cccccccCCCcceEEeCCeee--EECCEEEEEE
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFK-YDSVHGQWKHNELKVKDEKTL--LFGEKPVAVF 82 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~-ydS~~G~~~~~~v~~~~~~~l--~~~g~~i~v~ 82 (250)
.||+|+| ||.||++.++.+.+++.|+++++..- .+.+.++...+ |... -+-..+.... .+. .. +.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~-~n~~~l~~q~~~f~p~-------~v~v~~~~~~~~~l~-~~--~~ 72 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISFH-SNLELAFKIVKEFNVK-------NVAITGDVEFEDSSI-NV--WK 72 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEES-SCHHHHHHHHHHHTCC-------EEEECSSCCCCCSSS-EE--EE
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEcc-CCHHHHHHHHHHcCCC-------EEEEccHHHHHHHHH-HH--cc
Confidence 5899999 99999999999998866999999542 46665554431 2211 1111111000 000 00 11
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeC
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISA 128 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~ 128 (250)
.+....++- ...++|+|+.++-.+...+-.-.++++| |++.+.|
T Consensus 73 G~~~l~el~-~~~~~D~Vv~AivG~aGL~ptlaAi~aG-K~vaLAN 116 (376)
T 3a06_A 73 GSHSIEEML-EALKPDITMVAVSGFSGLRAVLASLEHS-KRVCLAN 116 (376)
T ss_dssp STTHHHHHH-HHHCCSEEEECCCSTTHHHHHHHHHHHC-SEEEECC
T ss_pred CHHHHHHHh-cCCCCCEEEEEeeCHHHHHHHHHHHHCC-CEEEEeC
Confidence 111111111 1126899999998888888777888899 5666643
No 110
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.49 E-value=0.002 Score=60.86 Aligned_cols=99 Identities=14% Similarity=0.161 Sum_probs=66.9
Q ss_pred ceeEEEEcC----ChHHHHHHHHHHcC-CCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEE
Q 025639 6 KIKIGINGF----GRIGRLVARVALQR-DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVA 80 (250)
Q Consensus 6 ~~kVaI~G~----G~IGr~~lr~l~~~-~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~ 80 (250)
++||||+|+ |.+|+..++++... +.++|++|.|. +++....+. ..+|- + + ..
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~--~~~~a~~~a---~~~g~-~--------~---------~~ 95 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP--TLKSSLQTI---EQLQL-K--------H---------AT 95 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS--CHHHHHHHH---HHTTC-T--------T---------CE
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHH---HHcCC-C--------c---------ce
Confidence 389999999 99999999999887 78999999987 554322211 11110 0 0 01
Q ss_pred EEecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCC-----CEEEEeCCC
Q 025639 81 VFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVVISAPS 130 (250)
Q Consensus 81 v~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Ga-----k~vvis~~s 130 (250)
++. +.+++- .+.++|+|+-||+.....+.+..++++|. |.|++--|.
T Consensus 96 ~~~--d~~ell-~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPl 147 (479)
T 2nvw_A 96 GFD--SLESFA-QYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWAL 147 (479)
T ss_dssp EES--CHHHHH-HCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSS
T ss_pred eeC--CHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCC
Confidence 111 222221 12368999999999888889999999993 678886664
No 111
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.33 E-value=0.006 Score=55.77 Aligned_cols=99 Identities=22% Similarity=0.149 Sum_probs=64.3
Q ss_pred ceeEEEEcCCh---HHHHHHHHHHcCCCceEEE-eeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEE
Q 025639 6 KIKIGINGFGR---IGRLVARVALQRDDVELVA-VNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (250)
Q Consensus 6 ~~kVaI~G~G~---IGr~~lr~l~~~~~~~vva-ind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v 81 (250)
++||||+|+|. ||+..++++...+.+++++ |.|. +++....+. ..||- + ..+.
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a---~~~g~-~--~~~~--------------- 68 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDI--DPIRGSAFG---EQLGV-D--SERC--------------- 68 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCS--SHHHHHHHH---HHTTC-C--GGGB---------------
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCC--CHHHHHHHH---HHhCC-C--ccee---------------
Confidence 48999999999 9999999888777799998 7776 554332221 11110 0 0000
Q ss_pred EecCCCCCCCcc----cCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 82 FGFRNPEEIPWA----KTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 82 ~~~~~p~~i~w~----~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
+ .+.+++--. +.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 69 ~--~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 118 (398)
T 3dty_A 69 Y--ADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALEAG-LHVVCEKPL 118 (398)
T ss_dssp C--SSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred e--CCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEEeCCC
Confidence 0 011111000 025899999999999999999999999 467775553
No 112
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.26 E-value=0.0063 Score=51.53 Aligned_cols=94 Identities=18% Similarity=0.141 Sum_probs=61.4
Q ss_pred ceeEEEEcCChHHHHHHHHH-HcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGRLVARVA-LQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l-~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
..||+|+|.|.+|+.+++.+ .+. .++++++-|. +++. .| -.++|.++ ...
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~--dp~k----------~g--------------~~i~gv~V--~~~ 130 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDV--DPEK----------VG--------------RPVRGGVI--EHV 130 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEES--CTTT----------TT--------------CEETTEEE--EEG
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeC--CHHH----------Hh--------------hhhcCCee--ecH
Confidence 47999999999999999863 334 6999999876 3320 01 11233332 222
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.+.+++ ..+ ++|.|+-|++.....+-+...+++|.+.++.-.|.
T Consensus 131 ~dl~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 131 DLLPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp GGHHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred HhHHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCcc
Confidence 233332 134 79999999998876677788888998654444554
No 113
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.22 E-value=0.035 Score=47.34 Aligned_cols=35 Identities=11% Similarity=0.153 Sum_probs=29.4
Q ss_pred CCceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 4 ~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.|++||.|.|.|.||+.+++.|.+++ .+|+++...
T Consensus 3 ~m~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r~ 37 (286)
T 3ius_A 3 AMTGTLLSFGHGYTARVLSRALAPQG-WRIIGTSRN 37 (286)
T ss_dssp --CCEEEEETCCHHHHHHHHHHGGGT-CEEEEEESC
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 47789999999999999999999886 888888654
No 114
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.14 E-value=0.036 Score=49.28 Aligned_cols=92 Identities=16% Similarity=0.138 Sum_probs=55.1
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCc--eEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDV--ELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~--~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
|.+||+|+|+|.+|+.+.+.|.+.. + +|++.+ . +++.+..+.++ | .+. ...
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G-~~~~V~~~d-r--~~~~~~~a~~~----G-------------~~~------~~~ 84 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSG-FKGKIYGYD-I--NPESISKAVDL----G-------------IID------EGT 84 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTT-CCSEEEEEC-S--CHHHHHHHHHT----T-------------SCS------EEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC-CCCEEEEEE-C--CHHHHHHHHHC----C-------------Ccc------hhc
Confidence 4479999999999999999998876 5 766664 3 35444333211 1 000 011
Q ss_pred ecCCCCC-CCcccCCccEEEeecCCCCCHHHHH---HHHHCCCCEEEEeCCC
Q 025639 83 GFRNPEE-IPWAKTGAEYVVESTGVFTDKDKAA---AHLKGGAKKVVISAPS 130 (250)
Q Consensus 83 ~~~~p~~-i~w~~~~vdiV~~~tg~~~~~~~a~---~~~~~Gak~vvis~~s 130 (250)
.++++ . ..++|+||.|++.....+..+ .+++.|+ +|++.+|
T Consensus 85 --~~~~~~~---~~~aDvVilavp~~~~~~vl~~l~~~l~~~~--iv~d~~S 129 (314)
T 3ggo_A 85 --TSIAKVE---DFSPDFVMLSSPVRTFREIAKKLSYILSEDA--TVTDQGS 129 (314)
T ss_dssp --SCTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHHSCTTC--EEEECCS
T ss_pred --CCHHHHh---hccCCEEEEeCCHHHHHHHHHHHhhccCCCc--EEEECCC
Confidence 23433 1 126899999998765444333 2334555 7776554
No 115
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.14 E-value=0.011 Score=50.26 Aligned_cols=94 Identities=13% Similarity=0.196 Sum_probs=57.5
Q ss_pred ceeEEEEcCChHHHHHHHH-HHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGRLVARV-ALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~-l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
.+||+|+|.|.+|+.+++. ......++++++-|. +++. .| -.++|.++ ...
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~--dp~k----------~g--------------~~i~gv~V--~~~ 136 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDI--NESK----------IG--------------TEVGGVPV--YNL 136 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEES--CTTT----------TT--------------CEETTEEE--EEG
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeC--CHHH----------HH--------------hHhcCCee--ech
Confidence 3689999999999999994 334446999999876 3320 01 12333332 222
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.+.+++- .+ . |+|+-|++.....+-+...+++|.+.++.-.|.
T Consensus 137 ~dl~eli-~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~ 179 (215)
T 2vt3_A 137 DDLEQHV-KD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPA 179 (215)
T ss_dssp GGHHHHC-SS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred hhHHHHH-Hh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCce
Confidence 2333221 12 3 999999988776777788889998766555564
No 116
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.94 E-value=0.033 Score=45.76 Aligned_cols=32 Identities=28% Similarity=0.376 Sum_probs=27.9
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|||.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD-YQIYAGARK 33 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS-CEEEEEESS
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 3899999 9999999999999886 888888654
No 117
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=95.61 E-value=0.021 Score=50.28 Aligned_cols=91 Identities=25% Similarity=0.253 Sum_probs=59.5
Q ss_pred CCceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 4 DKKIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 4 ~m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
+..+||+|.| +|++|+..++.+.+.+ +++++.-++ + . . | . . +.| ++++
T Consensus 5 ~~~~rVaViG~sG~~G~~~~~~l~~~g-~~~V~~V~p----~---~---~----g-----------~-~--~~G--~~vy 53 (288)
T 2nu8_A 5 DKNTKVICQGFTGSQGTFHSEQAIAYG-TKMVGGVTP----G---K---G----G-----------T-T--HLG--LPVF 53 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECT----T---C---T----T-----------C-E--ETT--EEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEeCC----C---c---c----c-----------c-e--eCC--eecc
Confidence 4457999999 5999999999988765 887765554 1 0 0 0 0 0 122 2233
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEE-EeC
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVV-ISA 128 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vv-is~ 128 (250)
. +.++++- +.++|+|+.|++.....+.+...+++|.+.+| ++.
T Consensus 54 ~--sl~el~~-~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi~t~ 97 (288)
T 2nu8_A 54 N--TVREAVA-ATGATASVIYVPAPFCKDSILEAIDAGIKLIITITE 97 (288)
T ss_dssp S--SHHHHHH-HHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCC
T ss_pred C--CHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 2 2233321 12689999999988888888899999987644 444
No 118
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.58 E-value=0.033 Score=45.81 Aligned_cols=32 Identities=34% Similarity=0.375 Sum_probs=28.1
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
+||.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-FEVTAVVRH 37 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcC
Confidence 6899999 9999999999999887 788887654
No 119
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=95.48 E-value=0.074 Score=41.64 Aligned_cols=85 Identities=19% Similarity=0.282 Sum_probs=58.0
Q ss_pred ceeEEEEcC----ChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEE
Q 025639 6 KIKIGINGF----GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (250)
Q Consensus 6 ~~kVaI~G~----G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v 81 (250)
+.+|||+|. |.+|+.+++.|.+.+ +++..+|-. . . .+ .|. ++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G-~~V~~vnp~----------------------~------~-~i--~G~--~~ 59 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKG-FEVLPVNPN----------------------Y------D-EI--EGL--KC 59 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTT----------------------C------S-EE--TTE--EC
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCC-CEEEEeCCC----------------------C------C-eE--CCe--ee
Confidence 368999998 999999999998876 786666532 0 0 11 222 22
Q ss_pred EecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCC
Q 025639 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (250)
Q Consensus 82 ~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~ 129 (250)
+ .++++++ ..+|+|+-|++.....+-.+..+++|++.+++..+
T Consensus 60 ~--~s~~el~---~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 60 Y--RSVRELP---KDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp B--SSGGGSC---TTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred c--CCHHHhC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 2 2455554 26899999998655555666677789988777553
No 120
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.45 E-value=0.039 Score=44.85 Aligned_cols=32 Identities=38% Similarity=0.504 Sum_probs=28.1
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|||.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG-HEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC-CEEEEEEcC
Confidence 4799999 9999999999999887 888888654
No 121
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.44 E-value=0.035 Score=48.10 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=28.9
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|++||.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 35 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDG-NTPIILTRS 35 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeCC
Confidence 667999999 9999999999999886 788887654
No 122
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.38 E-value=0.015 Score=49.78 Aligned_cols=33 Identities=15% Similarity=0.208 Sum_probs=27.5
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|||.|.| +|.||+.+++.|.+++..+|+++...
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~ 34 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRN 34 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESS
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECC
Confidence 4799999 99999999999888744888887654
No 123
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.25 E-value=0.032 Score=44.76 Aligned_cols=32 Identities=28% Similarity=0.289 Sum_probs=27.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
+||.|.| +|.||+.+++.|.+++ .+++++...
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRD 36 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeC
Confidence 5899999 9999999999999886 788877643
No 124
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.22 E-value=0.016 Score=50.12 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=27.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++|.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 37 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRP 37 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEECC
Confidence 5899999 9999999999999886 788877654
No 125
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.20 E-value=0.017 Score=52.62 Aligned_cols=34 Identities=18% Similarity=0.318 Sum_probs=30.6
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCC---CceEEEeeCC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRD---DVELVAVNDP 39 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~---~~~vvaind~ 39 (250)
++||||+|+|.||+.+++.+.+++ ++++++|.+.
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 489999999999999999998875 6999999885
No 126
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=95.17 E-value=0.023 Score=48.13 Aligned_cols=97 Identities=16% Similarity=0.273 Sum_probs=61.0
Q ss_pred ceeEEEEcCChHHHHHHHHHH-cCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGINGFGRIGRLVARVAL-QRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~-~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
..||+|+|.|..|+.+++.+. ++..|+++++-|. |++. ..|+ =.++|- +|..-
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~--dp~~---------kiG~-------------~~i~Gv--pV~~~ 137 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDL--DSND---------LVGK-------------TTEDGI--PVYGI 137 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEEC--TTST---------TTTC-------------BCTTCC--BEEEG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeC--Cchh---------ccCc-------------eeECCe--EEeCH
Confidence 479999999999999988742 3346999998776 3210 0121 012232 22321
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~ 129 (250)
.+.+++ -.+.++|+++-|++.....+-+....++|.|.+.--+|
T Consensus 138 ~dL~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap 181 (212)
T 3keo_A 138 STINDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSP 181 (212)
T ss_dssp GGHHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSS
T ss_pred HHHHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCC
Confidence 222221 12347999999999887777888888999977544444
No 127
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=95.11 E-value=0.07 Score=50.34 Aligned_cols=103 Identities=17% Similarity=0.253 Sum_probs=68.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCC--------CChhHHhhhhcccccc-ccCCCcceEEeCCeeeEECCE
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPF--------ISTDYMTYMFKYDSVH-GQWKHNELKVKDEKTLLFGEK 77 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~--------~~~~~~a~ll~ydS~~-G~~~~~~v~~~~~~~l~~~g~ 77 (250)
.+|+|-|||.||+.+++.|.+.. -.+|+|.|.. .+++.+..|+++-... |+.. .+.+ .+. +.+
T Consensus 253 ~~vaVqG~GnVG~~~a~~L~~~G-akvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~----~~~~--~~~-~a~ 324 (470)
T 2bma_A 253 QTAVVSGSGNVALYCVQKLLHLN-VKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIK----EYLN--HSS-TAK 324 (470)
T ss_dssp CEEEEECSSHHHHHHHHHHHHTT-CEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGG----GGGG--TCS-SCE
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHH----HHHh--hcC-CcE
Confidence 58999999999999999998886 8999999852 3556666666543221 2211 0110 000 111
Q ss_pred EEEEEecCCCCCCCcccCCccEEEeec-CCCCCHHHHHHHHHCCCCEEEE
Q 025639 78 PVAVFGFRNPEEIPWAKTGAEYVVEST-GVFTDKDKAAAHLKGGAKKVVI 126 (250)
Q Consensus 78 ~i~v~~~~~p~~i~w~~~~vdiV~~~t-g~~~~~~~a~~~~~~Gak~vvi 126 (250)
.. +++++ |. .++||.+-|+ +..++.+.++..++.+|| +|+
T Consensus 325 ---~v---~~~~~-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 365 (470)
T 2bma_A 325 ---YF---PNEKP-WG-VPCTLAFPCATQNDVDLDQAKLLQKNGCI-LVG 365 (470)
T ss_dssp ---EC---SSCCT-TS-SCCSEEEECSSTTCBCSHHHHHHHHTTCC-EEE
T ss_pred ---Ee---cCcCe-ee-cCccEEEeccccCcCCHHHHHHHHhcCcE-EEE
Confidence 11 22333 74 6899999998 777888999988888985 444
No 128
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=95.01 E-value=0.025 Score=51.04 Aligned_cols=96 Identities=14% Similarity=0.148 Sum_probs=59.9
Q ss_pred ceeEEEEc-CChHHHH-HH----HHHHcCCCceEE---------EeeCCCCChhHHhhhhccccccccCCCcceEEeCCe
Q 025639 6 KIKIGING-FGRIGRL-VA----RVALQRDDVELV---------AVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEK 70 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~-~l----r~l~~~~~~~vv---------aind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~ 70 (250)
++||||+| +|.+|+. .+ +++.+.+.++++ +|.|. +++....+. ..||. .
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~--~~~~a~~~a---~~~~~----~------- 69 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGR--SAEKVEALA---KRFNI----A------- 69 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECS--SSHHHHHHH---HHTTC----C-------
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcC--CHHHHHHHH---HHhCC----C-------
Confidence 58999999 9999997 66 777766545543 57665 443222211 11110 0
Q ss_pred eeEECCEEEEEEecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 71 TLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 71 ~l~~~g~~i~v~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.++ .|.+++- .+.++|+|+-||+.....+.+..++++| |.|++--|-
T Consensus 70 ---------~~~--~~~~~ll-~~~~iD~V~i~tp~~~h~~~~~~al~~G-k~V~~EKP~ 116 (383)
T 3oqb_A 70 ---------RWT--TDLDAAL-ADKNDTMFFDAATTQARPGLLTQAINAG-KHVYCEKPI 116 (383)
T ss_dssp ---------CEE--SCHHHHH-HCSSCCEEEECSCSSSSHHHHHHHHTTT-CEEEECSCS
T ss_pred ---------ccc--CCHHHHh-cCCCCCEEEECCCchHHHHHHHHHHHCC-CeEEEcCCC
Confidence 011 1222211 1236899999999999999999999999 466665453
No 129
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.82 E-value=0.0076 Score=52.55 Aligned_cols=34 Identities=29% Similarity=0.301 Sum_probs=28.4
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|+.||.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~ 44 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTRP 44 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECT
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCC-CcEEEEECC
Confidence 334899999 9999999999999886 788777654
No 130
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.77 E-value=0.068 Score=44.57 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=28.2
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 6 KIKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
+++|.|.| +|.||+.+++.|.+++..+|+++...
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESS
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcC
Confidence 46899999 99999999999998865787777543
No 131
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.73 E-value=0.025 Score=49.16 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=28.3
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|+++|.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 37 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYARP 37 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECC
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEECC
Confidence 446899999 9999999999999886 788777654
No 132
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=94.66 E-value=0.14 Score=40.27 Aligned_cols=85 Identities=16% Similarity=0.151 Sum_probs=57.9
Q ss_pred eeEEEEcC----ChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 7 IKIGINGF----GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 7 ~kVaI~G~----G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
.+|||+|. |.+|+.+++.|.+.+ +++..+|-. +. +. .+ .|. +++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G-~~v~~vnp~--------~~------------------g~-~i--~G~--~~~ 61 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQG-YHVIPVSPK--------VA------------------GK-TL--LGQ--QGY 61 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHT-CCEEEECSS--------ST------------------TS-EE--TTE--ECC
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCC-CEEEEeCCc--------cc------------------cc-cc--CCe--ecc
Confidence 57999997 899999999988776 786666532 00 01 11 232 233
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeC
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISA 128 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~ 128 (250)
.++++++ ..+|+|+-|++.....+-.+..+++|+|.++++.
T Consensus 62 --~sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 62 --ATLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp --SSTTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCT
T ss_pred --CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 2466665 2689999999876555666667778998887764
No 133
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.41 E-value=0.027 Score=49.75 Aligned_cols=32 Identities=28% Similarity=0.388 Sum_probs=28.2
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
+||.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~ 43 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAH-RPTYILARP 43 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECS
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECC
Confidence 6899999 9999999999999887 788888764
No 134
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.34 E-value=0.054 Score=41.84 Aligned_cols=42 Identities=26% Similarity=0.378 Sum_probs=33.0
Q ss_pred CCCceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhh
Q 025639 3 GDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTY 48 (250)
Q Consensus 3 ~~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ 48 (250)
.+|+-+|.|.|+|++|+.+++.|.++. .+++++.. +++.+..
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g-~~v~vid~---~~~~~~~ 45 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASD-IPLVVIET---SRTRVDE 45 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTT-CCEEEEES---CHHHHHH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEEC---CHHHHHH
Confidence 346678999999999999999999876 88888864 3554433
No 135
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.23 E-value=0.029 Score=48.30 Aligned_cols=32 Identities=28% Similarity=0.309 Sum_probs=27.4
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
+||.|.| +|.||+.+++.|.+++ .+++++...
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~ 37 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLG-HPTFLLVRE 37 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEECC
Confidence 5899999 9999999999999886 787776543
No 136
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=94.16 E-value=0.21 Score=39.14 Aligned_cols=83 Identities=22% Similarity=0.234 Sum_probs=57.5
Q ss_pred eeEEEEcC----ChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 7 IKIGINGF----GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 7 ~kVaI~G~----G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
.+|||+|. |++|+.+++.|.+.+ |++..||-. ++ .+ .|. +++
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G-~~v~~Vnp~------------~~-----------------~i--~G~--~~y 68 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHG-YDVYPVNPK------------YE-----------------EV--LGR--KCY 68 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTT------------CS-----------------EE--TTE--ECB
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCC-CEEEEECCC------------CC-----------------eE--CCe--ecc
Confidence 57999996 899999999988876 787666522 01 11 222 223
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeC
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISA 128 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~ 128 (250)
.++++++ ..+|+|+-++......+.++...+.|+|.++++.
T Consensus 69 --~sl~~l~---~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 69 --PSVLDIP---DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQY 109 (144)
T ss_dssp --SSGGGCS---SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECT
T ss_pred --CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECC
Confidence 2355554 2689999999876666677777889998877764
No 137
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.15 E-value=0.28 Score=43.03 Aligned_cols=32 Identities=31% Similarity=0.347 Sum_probs=26.1
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|+|||+|+|.|.+|..+...|. .. .+|..+..
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g-~~V~~~~r 32 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LY-HDVTVVTR 32 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TT-SEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cC-CceEEEEC
Confidence 6789999999999999999888 64 67766654
No 138
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.10 E-value=0.28 Score=40.55 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=28.1
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
+||.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~R~ 54 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKG-HEPVAMVRN 54 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CeEEEECCCChHHHHHHHHHHhCC-CeEEEEECC
Confidence 6899999 9999999999999886 788888654
No 139
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.00 E-value=0.28 Score=43.22 Aligned_cols=39 Identities=23% Similarity=0.206 Sum_probs=31.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
.||||+|.|.+|..+++.+. .. ++|+..+- +++.+..+.
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG-~~V~v~d~---~~~~~~~~~ 51 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SK-HEVVLQDV---SEKALEAAR 51 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TT-SEEEEECS---CHHHHHHHH
T ss_pred CeEEEEeeCHHHHHHHHHHH-cC-CEEEEEEC---CHHHHHHHH
Confidence 58999999999999999999 76 88877763 466555554
No 140
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=93.98 E-value=0.18 Score=38.76 Aligned_cols=84 Identities=18% Similarity=0.096 Sum_probs=60.4
Q ss_pred eeEEEEc-C---ChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 7 IKIGING-F---GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 7 ~kVaI~G-~---G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
-+|||+| . +++|..+++.|.++. |+|..||-- ++.. .|.+ .+
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g-~~V~pVnP~------------~~~i-------------------~G~~--~y 50 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHG-HEFIPVGRK------------KGEV-------------------LGKT--II 50 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHT-CCEEEESSS------------CSEE-------------------TTEE--CB
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCC-CeEEEECCC------------CCcC-------------------CCee--cc
Confidence 3799999 3 889999999999886 798888732 1211 2221 22
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.+.++++ . +|+|+-+++.....+..+...+.|+|.++++...
T Consensus 51 --~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~G~ 92 (122)
T 3ff4_A 51 --NERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNPGT 92 (122)
T ss_dssp --CSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECTTC
T ss_pred --CChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 2466676 2 8999999987777777788888999988776543
No 141
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=93.84 E-value=0.13 Score=48.28 Aligned_cols=102 Identities=17% Similarity=0.295 Sum_probs=67.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCC--------C-ChhHHhhhhcccccc-ccCCCcceEEeCCeeeEECC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPF--------I-STDYMTYMFKYDSVH-GQWKHNELKVKDEKTLLFGE 76 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~--------~-~~~~~a~ll~ydS~~-G~~~~~~v~~~~~~~l~~~g 76 (250)
.+|+|-|||-||+.+++.|.+.. ..+|+|.|.. . +++.+..|+++-... |.+. .+.+ .+ +.
T Consensus 231 ~~v~VqG~GnVG~~~a~~L~~~G-akvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~----~y~~--~~--~a 301 (449)
T 1bgv_A 231 KTVALAGFGNVAWGAAKKLAELG-AKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQ----DYAD--KF--GV 301 (449)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHT-CEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTH----HHHH--HH--TC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChh----hccc--cc--CC
Confidence 58999999999999999998876 8999998841 1 444555666543222 2222 0111 01 11
Q ss_pred EEEEEEecCCCCCCCcccCCccEEEeec-CCCCCHHHHHHHHHCCCCEEEE
Q 025639 77 KPVAVFGFRNPEEIPWAKTGAEYVVEST-GVFTDKDKAAAHLKGGAKKVVI 126 (250)
Q Consensus 77 ~~i~v~~~~~p~~i~w~~~~vdiV~~~t-g~~~~~~~a~~~~~~Gak~vvi 126 (250)
+.+ . ++++ |. .++|+.+-|+ +..++.+.++.....||| +|+
T Consensus 302 ~~i---~---~~e~-~~-~~~Dil~P~A~~~~I~~~na~~l~a~g~k-iV~ 343 (449)
T 1bgv_A 302 QFF---P---GEKP-WG-QKVDIIMPCATQNDVDLEQAKKIVANNVK-YYI 343 (449)
T ss_dssp EEE---E---TCCG-GG-SCCSEEECCSCTTCBCHHHHHHHHHTTCC-EEE
T ss_pred EEe---C---chhh-hc-CCcceeeccccccccchhhHHHHHhcCCe-EEE
Confidence 211 1 2333 74 6899999988 888899999888778995 455
No 142
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=93.83 E-value=0.096 Score=46.10 Aligned_cols=90 Identities=17% Similarity=0.202 Sum_probs=57.6
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEe
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~ 83 (250)
..+||+|.| +|+.|+.+++.+.+.+ +++++--++ . + . +. . +.| ++++.
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g-~~~v~~VnP----~---~-----------~-------g~-~--i~G--~~vy~ 54 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYG-TKIVAGVTP----G---K-----------G-------GM-E--VLG--VPVYD 54 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECT----T---C-----------T-------TC-E--ETT--EEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcC-CeEEEEECC----C---C-----------C-------Cc-e--ECC--EEeeC
Confidence 347999999 6999999999888764 887643334 1 0 0 00 1 222 22332
Q ss_pred cCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEE-eC
Q 025639 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVI-SA 128 (250)
Q Consensus 84 ~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvi-s~ 128 (250)
+.++++- +.++|+++.+++.....+.++..+++|.+.+|+ +.
T Consensus 55 --sl~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi~t~ 97 (288)
T 1oi7_A 55 --TVKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITE 97 (288)
T ss_dssp --SHHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred --CHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 2233321 126899999998887778888888999985554 53
No 143
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=93.78 E-value=0.079 Score=49.33 Aligned_cols=32 Identities=22% Similarity=0.474 Sum_probs=29.8
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.||+|-|||.||+.+++.|.+.. ..+|+|.|.
T Consensus 213 ~~vaVqG~GnVG~~~a~~L~~~G-akvVavsD~ 244 (421)
T 2yfq_A 213 AKIAVQGFGNVGTFTVKNIERQG-GKVCAIAEW 244 (421)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEECCBC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEEec
Confidence 68999999999999999999886 999999998
No 144
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.71 E-value=0.033 Score=52.69 Aligned_cols=40 Identities=20% Similarity=0.297 Sum_probs=31.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
.||||+|.|.+|..++..+.+.. ++|+..+ . +++.+..+.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG-~~V~l~D-~--~~e~l~~~~ 45 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHG-HQVLLYD-I--SAEALTRAI 45 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCEEEEC-S--CHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CeEEEEE-C--CHHHHHHHH
Confidence 48999999999999999998876 7877664 3 466555544
No 145
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=93.64 E-value=0.12 Score=45.83 Aligned_cols=33 Identities=36% Similarity=0.509 Sum_probs=24.3
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|||+|+|.|.||+.++-+|..++-+.-+.+-|.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di 33 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 589999999999999888776654433334454
No 146
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.54 E-value=0.072 Score=40.77 Aligned_cols=31 Identities=16% Similarity=0.115 Sum_probs=27.3
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|.|.|+|++|+.+++.|.+++ .+++.+..
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g-~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAG-KKVLAVDK 37 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEEC
Confidence 58999999999999999999886 78888864
No 147
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=93.45 E-value=0.18 Score=43.07 Aligned_cols=69 Identities=23% Similarity=0.251 Sum_probs=48.7
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
||-.|+| +||+||.+.+++. .+++++++.-|. . + . .
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~~-~~~~elv~~id~--------------------~--------~-~-------------~ 49 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVFS-EKGHELVLKVDV--------------------N--------G-V-------------E 49 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEEET--------------------T--------E-E-------------E
T ss_pred ceeEEEEecCHHHHHHHHHHh-CCCCEEEEEEcC--------------------C--------C-c-------------c
Confidence 5889999 8999999988764 456998877443 0 0 0 0
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEE
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVI 126 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvi 126 (250)
+. . ++|+|+|-|-.....+.++.+++.|.+ +|+
T Consensus 50 ~l-----~--~~DVvIDFT~P~a~~~~~~~~~~~g~~-~Vi 82 (228)
T 1vm6_A 50 EL-----D--SPDVVIDFSSPEALPKTVDLCKKYRAG-LVL 82 (228)
T ss_dssp EC-----S--CCSEEEECSCGGGHHHHHHHHHHHTCE-EEE
T ss_pred cc-----c--CCCEEEECCCHHHHHHHHHHHHHcCCC-EEE
Confidence 11 1 468999888777777888888888873 444
No 148
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=93.44 E-value=0.099 Score=48.19 Aligned_cols=112 Identities=16% Similarity=0.174 Sum_probs=65.1
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCC-ceEEEeeCCCCChhHHhhhhc-cccccccCCCcceEEeCCe---eeE--E--
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDD-VELVAVNDPFISTDYMTYMFK-YDSVHGQWKHNELKVKDEK---TLL--F-- 74 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~-~~vvaind~~~~~~~~a~ll~-ydS~~G~~~~~~v~~~~~~---~l~--~-- 74 (250)
|+ +|.|.| ||.||++.++.+..+|+ |+|+++..- .+.+.++...+ |...+ +-..+.. .|. +
T Consensus 9 ~k-~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag-~nv~~L~~q~~~f~p~~-------v~v~d~~~~~~L~~~l~~ 79 (406)
T 1q0q_A 9 MK-QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG-KNVTRMVEQCLEFSPRY-------AVMDDEASAKLLKTMLQQ 79 (406)
T ss_dssp CE-EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES-SCHHHHHHHHHHHCCSE-------EEESSHHHHHHHHHHHHH
T ss_pred ce-eEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcC-CCHHHHHHHHHHhCCCE-------EEEcCHHHHHHHHHHhhc
Confidence 64 999999 99999999999999875 999999874 67765554331 22111 1111100 000 0
Q ss_pred CCEEEEEEecCC-CCCC-CcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeC
Q 025639 75 GEKPVAVFGFRN-PEEI-PWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISA 128 (250)
Q Consensus 75 ~g~~i~v~~~~~-p~~i-~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~ 128 (250)
.+..+++....+ ..++ .+ .++|+|+-+.-.+....---.++++| |++.+.|
T Consensus 80 ~~~~~~v~~G~~~l~~~a~~--~~~D~Vv~AIvG~aGL~PTlaAi~aG-K~iaLAN 132 (406)
T 1q0q_A 80 QGSRTEVLSGQQAACDMAAL--EDVDQVMAAIVGAAGLLPTLAAIRAG-KTILLAN 132 (406)
T ss_dssp TTCCCEEEESHHHHHHHHTC--TTCCEEEECCSSGGGHHHHHHHHHTT-CEEEECC
T ss_pred CCCCcEEEeCHHHHHHHhcC--CCCCEEEEccccHhHHHHHHHHHHCC-CeEEEec
Confidence 121223332111 1111 11 26899999886666666555778899 5665643
No 149
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.38 E-value=0.048 Score=46.87 Aligned_cols=32 Identities=28% Similarity=0.287 Sum_probs=27.1
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
+||.|.| +|.||+.+++.|.+++ .+++++...
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 35 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG-NPTYALVRK 35 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT-CCEEEEECC
T ss_pred cEEEEECCCchHHHHHHHHHHhCC-CcEEEEECC
Confidence 5899999 9999999999999876 777777543
No 150
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=93.37 E-value=0.091 Score=45.71 Aligned_cols=32 Identities=28% Similarity=0.472 Sum_probs=27.9
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|||.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 46 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG-HDLVLIHRP 46 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEecC
Confidence 6899999 9999999999999886 788887654
No 151
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.35 E-value=0.18 Score=47.15 Aligned_cols=30 Identities=30% Similarity=0.511 Sum_probs=26.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.||+|+|.|.+|..++..+.... ++|+.++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G-~~V~l~D 67 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVG-ISVVAVE 67 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CeEEEEE
Confidence 58999999999999999998876 7877664
No 152
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=93.30 E-value=0.11 Score=47.76 Aligned_cols=111 Identities=17% Similarity=0.157 Sum_probs=62.3
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCC-ceEEEeeCCCCChhHHhhhhc-cccccccCCCcceEEeCCeeeEECCEEEEEEe
Q 025639 7 IKIGING-FGRIGRLVARVALQRDD-VELVAVNDPFISTDYMTYMFK-YDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~-~~vvaind~~~~~~~~a~ll~-ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~ 83 (250)
.||.|.| ||.||++.++.+..+|+ |+|+++..-..+.+.++...+ |... -+-..+.....-. .+++..
T Consensus 22 k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~~f~p~-------~v~v~d~~~~~~~--~~~v~~ 92 (398)
T 2y1e_A 22 LRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGVT-------NIAVADEHAAQRV--GDIPYH 92 (398)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHHHHCCC-------CEEESCHHHHHHH--CCCSEE
T ss_pred eEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHHHcCCC-------EEEEcCHHHhhhc--CCEEEe
Confidence 4899999 99999999999999875 999999872256665554331 2211 1111111000000 011111
Q ss_pred cCC-CCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeC
Q 025639 84 FRN-PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISA 128 (250)
Q Consensus 84 ~~~-p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~ 128 (250)
..+ ..++- ...++|+|+-+.-.+....---.++++| |++.+.|
T Consensus 93 G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aG-K~iaLAN 136 (398)
T 2y1e_A 93 GSDAATRLV-EQTEADVVLNALVGALGLRPTLAALKTG-ARLALAN 136 (398)
T ss_dssp STTHHHHHH-HHSCCSEEEECCCSGGGHHHHHHHHHHT-CEEEECC
T ss_pred cHHHHHHHh-cCCCCCEEEEeCcCHHHHHHHHHHHHCC-CceEEcc
Confidence 111 11110 0125899999886666666555677888 5665643
No 153
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=93.14 E-value=0.075 Score=45.94 Aligned_cols=33 Identities=24% Similarity=0.497 Sum_probs=25.7
Q ss_pred CCceeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 4 ~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.|+|||+|+|+|.+|+.+++.|...+ +++..++
T Consensus 3 ~M~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 35 (299)
T 1vpd_A 3 AMTMKVGFIGLGIMGKPMSKNLLKAG-YSLVVSD 35 (299)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTT-CEEEEEC
T ss_pred cccceEEEECchHHHHHHHHHHHhCC-CEEEEEe
Confidence 47789999999999999999998876 7765553
No 154
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=93.07 E-value=0.29 Score=45.47 Aligned_cols=94 Identities=21% Similarity=0.327 Sum_probs=57.5
Q ss_pred eeEEEEcCChHHHHHHHHHHc-CCCceEEEeeCCCC--------ChhHHhhhhccccccccCCCcceEEeCCeeeEECCE
Q 025639 7 IKIGINGFGRIGRLVARVALQ-RDDVELVAVNDPFI--------STDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEK 77 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~-~~~~~vvaind~~~--------~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~ 77 (250)
.+|+|.|||-||+.+++.|.+ .. ..+|+|.|... |++.+ ++|-..+|++. .+.+ .+
T Consensus 210 ~~vaVqG~GnVG~~~a~~L~e~~G-akvVavsD~~G~i~dp~Gld~~~l---~~~~~~~g~l~----~y~~-------a~ 274 (415)
T 2tmg_A 210 ATVAVQGFGNVGQFAALLISQELG-SKVVAVSDSRGGIYNPEGFDVEEL---IRYKKEHGTVV----TYPK-------GE 274 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEEEECSSCEEECTTCCCHHHH---HHHHHHSSCST----TCSS-------SE
T ss_pred CEEEEECCcHHHHHHHHHHHHhcC-CEEEEEEeCCCeEECCCCCCHHHH---HHHHHhhCCcc----cCCC-------ce
Confidence 689999999999999999988 65 99999998721 34322 22221223222 0000 11
Q ss_pred EEEEEecCCCCCCCcccCCccEEEeec-CCCCCHHHHHHHHHCCCCEEEEe
Q 025639 78 PVAVFGFRNPEEIPWAKTGAEYVVEST-GVFTDKDKAAAHLKGGAKKVVIS 127 (250)
Q Consensus 78 ~i~v~~~~~p~~i~w~~~~vdiV~~~t-g~~~~~~~a~~~~~~Gak~vvis 127 (250)
. + +++++ |. .++|+++.|+ +..++.+.+.. -+|| +|+-
T Consensus 275 ~--~----~~~ei-l~-~~~DIliP~A~~n~i~~~~a~~---l~ak-~V~E 313 (415)
T 2tmg_A 275 R--I----TNEEL-LE-LDVDILVPAALEGAIHAGNAER---IKAK-AVVE 313 (415)
T ss_dssp E--E----CHHHH-TT-CSCSEEEECSSTTSBCHHHHTT---CCCS-EEEC
T ss_pred E--c----Cchhh-hc-CCCcEEEecCCcCccCcccHHH---cCCe-EEEe
Confidence 1 1 12222 54 5899999998 66777777654 3674 4553
No 155
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=93.02 E-value=0.053 Score=49.87 Aligned_cols=98 Identities=16% Similarity=0.133 Sum_probs=54.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCc-eEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~-~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
+||+|.|.|.||+.+++.|.+++++ ..+.+.+. +.+....+.+ . ++... +. .+.. +.+ ...
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r--~~~~~~~la~--~-l~~~~-------~~-~~~~----~~~-D~~ 63 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASR--TLSKCQEIAQ--S-IKAKG-------YG-EIDI----TTV-DAD 63 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEES--CHHHHHHHHH--H-HHHTT-------CC-CCEE----EEC-CTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEEC--CHHHHHHHHH--H-hhhhc-------CC-ceEE----EEe-cCC
Confidence 5999999999999999999988765 33444443 3433222220 0 00000 00 0110 000 000
Q ss_pred CCCCCC--cccCCccEEEeecCCCCCHHHHHHHHHCCCC
Q 025639 86 NPEEIP--WAKTGAEYVVESTGVFTDKDKAAAHLKGGAK 122 (250)
Q Consensus 86 ~p~~i~--w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak 122 (250)
+++++. ..+.++|+|+.|+|.+.....++..+++|+.
T Consensus 64 d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~ 102 (405)
T 4ina_A 64 SIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVP 102 (405)
T ss_dssp CHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCC
Confidence 111111 1111489999999998877777888899973
No 156
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.96 E-value=0.099 Score=49.19 Aligned_cols=30 Identities=23% Similarity=0.211 Sum_probs=26.5
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.||||+|.|.+|..++..+.+.. ++|+..+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG-~~V~l~D 84 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAG-IETFLVV 84 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEE
Confidence 58999999999999999999886 8877764
No 157
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.96 E-value=0.12 Score=44.71 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=27.8
Q ss_pred CCceeEEEEcC-ChHHHHHHHHHHcCCCceEEEee
Q 025639 4 DKKIKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 4 ~m~~kVaI~G~-G~IGr~~lr~l~~~~~~~vvain 37 (250)
+|++||+|+|. |.+|+.+++.|.+.. ++|+.++
T Consensus 9 ~mmm~I~iIG~tG~mG~~la~~l~~~g-~~V~~~~ 42 (286)
T 3c24_A 9 VGPKTVAILGAGGKMGARITRKIHDSA-HHLAAIE 42 (286)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHSS-SEEEEEC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEE
Confidence 45579999998 999999999998876 7877664
No 158
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.89 E-value=0.23 Score=49.22 Aligned_cols=38 Identities=16% Similarity=0.255 Sum_probs=29.6
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhh
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTY 48 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ 48 (250)
.||||+|.|.+|..+...+.+.. ++|+.++- +++.+..
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG-~~V~l~D~---~~~~~~~ 350 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSN-YPVILKEV---NEKFLEA 350 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CCEEEECS---SHHHHHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCC-CEEEEEEC---CHHHHHH
Confidence 58999999999999999999876 78777653 3554433
No 159
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.76 E-value=0.091 Score=43.83 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=27.8
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++||+|+|+|.+|+.+++.|.+.. ++++.+.+.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g-~~V~~v~~r 55 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQ-IPAIIANSR 55 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTT-CCEEEECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CEEEEEECC
Confidence 479999999999999999998876 787775554
No 160
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.69 E-value=0.28 Score=42.89 Aligned_cols=32 Identities=31% Similarity=0.408 Sum_probs=25.4
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCc-eEEEee
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~-~vvain 37 (250)
+|||+|+|.|.+|..++..|...+.+ +|+.+.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d 39 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLED 39 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 47999999999999999988877522 666554
No 161
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=92.56 E-value=0.1 Score=44.16 Aligned_cols=41 Identities=15% Similarity=0.351 Sum_probs=30.0
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCc----eEEEeeCCCCChhHHhhh
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDV----ELVAVNDPFISTDYMTYM 49 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~----~vvaind~~~~~~~~a~l 49 (250)
|++||+|+|+|.+|+.+++.|.+.. + ++...+ . +++.+..+
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~g-~~~~~~V~~~~-r--~~~~~~~~ 45 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINKN-IVSSNQIICSD-L--NTANLKNA 45 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTT-SSCGGGEEEEC-S--CHHHHHHH
T ss_pred CCCeEEEECccHHHHHHHHHHHhCC-CCCCCeEEEEe-C--CHHHHHHH
Confidence 5679999999999999999998875 4 655553 3 45544333
No 162
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.42 E-value=0.16 Score=38.10 Aligned_cols=31 Identities=26% Similarity=0.468 Sum_probs=26.8
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|||+|.|+|.+|+.+++.|.+.. .+++.+..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g-~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG-HDIVLIDI 35 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEEC
Confidence 58999999999999999998876 78777754
No 163
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=92.34 E-value=0.12 Score=46.00 Aligned_cols=32 Identities=25% Similarity=0.308 Sum_probs=27.5
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.+|||+|+|+||+.+++.+.... ++|++.+..
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G-~~V~~~dr~ 171 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWG-FPLRCWSRS 171 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CCEEEEESS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEEcCC
Confidence 58999999999999999998776 888887643
No 164
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=92.25 E-value=0.46 Score=44.62 Aligned_cols=103 Identities=11% Similarity=0.247 Sum_probs=63.3
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCC--------CChhHHhhhhccccccc-cCCCcceEEeCCeeeEECCE
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPF--------ISTDYMTYMFKYDSVHG-QWKHNELKVKDEKTLLFGEK 77 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~--------~~~~~~a~ll~ydS~~G-~~~~~~v~~~~~~~l~~~g~ 77 (250)
.+|+|-|||.||+.+++.|.+.. -.+|+|.|.. .|++.+..+.++...++ +.. .+..+ . .+.+
T Consensus 240 ~~VaVQG~GnVG~~aa~~L~e~G-akvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~----~~~~~--~-~~a~ 311 (456)
T 3r3j_A 240 KKCLVSGSGNVAQYLVEKLIEKG-AIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLK----EYLKY--S-KTAK 311 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT-CCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGG----GGGGT--C-SSCE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchh----hhhhc--C-CCce
Confidence 58999999999999999988765 7788888852 24444444433322111 111 00000 0 0111
Q ss_pred EEEEEecCCCCCCCcccCCccEEEeec-CCCCCHHHHHHHHHCCCCEEEE
Q 025639 78 PVAVFGFRNPEEIPWAKTGAEYVVEST-GVFTDKDKAAAHLKGGAKKVVI 126 (250)
Q Consensus 78 ~i~v~~~~~p~~i~w~~~~vdiV~~~t-g~~~~~~~a~~~~~~Gak~vvi 126 (250)
. . +++++ |. .++||.+=|+ +..++.+.++...+.+|| +|+
T Consensus 312 ~---v---~~~~i-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 352 (456)
T 3r3j_A 312 Y---F---ENQKP-WN-IPCDIAFPCATQNEINENDADLFIQNKCK-MIV 352 (456)
T ss_dssp E---E---CSCCG-GG-SCCSEEEECSCTTCBCHHHHHHHHHHTCC-EEE
T ss_pred E---e---CCccc-cc-cCccEEEeCCCccchhhHHHHHHHhcCCe-EEE
Confidence 1 1 23332 75 5899999986 788899999887777884 445
No 165
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=92.20 E-value=0.13 Score=46.46 Aligned_cols=31 Identities=35% Similarity=0.490 Sum_probs=26.9
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+...+ ++|++.+.
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G-~~V~~~dr 204 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFG-LAIHYHNR 204 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTT-CEEEEECS
T ss_pred CEEEEEEeChhHHHHHHHHHHCC-CEEEEECC
Confidence 58999999999999999998765 89877754
No 166
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=92.16 E-value=0.45 Score=44.17 Aligned_cols=32 Identities=28% Similarity=0.457 Sum_probs=29.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.+|+|-|||-||+.+++.|.+.. ..+|+|.|.
T Consensus 219 k~vaVqG~GnVG~~~a~~L~~~G-akVVavsD~ 250 (419)
T 3aoe_E 219 ARVVVQGLGQVGAAVALHAERLG-MRVVAVATS 250 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEEET
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 58999999999999999999886 999999987
No 167
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=92.16 E-value=0.13 Score=46.29 Aligned_cols=31 Identities=29% Similarity=0.493 Sum_probs=27.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G-~~V~~~d~ 172 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFG-MKVLCYDV 172 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred ceEEEECcCHHHHHHHHHHHHCc-CEEEEECC
Confidence 58999999999999999998776 89887764
No 168
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.13 E-value=0.15 Score=45.16 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=26.2
Q ss_pred CCCCCceeEEEEcCChHHHHHHHHHHcCCCc-eEEEe
Q 025639 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDV-ELVAV 36 (250)
Q Consensus 1 ~~~~m~~kVaI~G~G~IGr~~lr~l~~~~~~-~vvai 36 (250)
|...+++||+|+|.|.||..++..+..++-+ +|+.+
T Consensus 1 m~~~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~ 37 (316)
T 1ldn_A 1 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLI 37 (316)
T ss_dssp CTTTTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEE
Confidence 3334457999999999999998888765422 55555
No 169
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=92.00 E-value=0.27 Score=38.35 Aligned_cols=87 Identities=13% Similarity=0.055 Sum_probs=57.5
Q ss_pred eeEEEEcC----ChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 7 IKIGINGF----GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 7 ~kVaI~G~----G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
.+|+|+|. |+.|+.+++.|.++. |++..||-. + .++ .+ .|. +++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G-~~v~~vnp~--------~--~~~-----------------~i--~G~--~~~ 61 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQG-YRVLPVNPR--------F--QGE-----------------EL--FGE--EAV 61 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTT-CEEEEECGG--------G--TTS-----------------EE--TTE--ECB
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCC-CEEEEeCCC--------c--ccC-----------------cC--CCE--Eec
Confidence 58999996 899999999998876 786666521 0 011 11 232 223
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s 130 (250)
.++++++ ..+|+|+-++......+.++...+.|+|.++++.+.
T Consensus 62 --~sl~el~---~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g~ 104 (140)
T 1iuk_A 62 --ASLLDLK---EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSGI 104 (140)
T ss_dssp --SSGGGCC---SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTTC
T ss_pred --CCHHHCC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCCc
Confidence 2345554 268999998877555556667778899988886543
No 170
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=91.91 E-value=0.15 Score=45.82 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=27.6
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.+|||+|+|+||+.+++.+.... ++|++.+..
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~dr~ 172 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFG-MKVLGVSRS 172 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECSS
T ss_pred ceEEEEEECHHHHHHHHHHHhCC-CEEEEEcCC
Confidence 58999999999999999998776 898887643
No 171
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=91.89 E-value=0.15 Score=45.65 Aligned_cols=32 Identities=28% Similarity=0.394 Sum_probs=27.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.+|||+|+|+||+.+++.+.... ++|++.+..
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G-~~V~~~dr~ 169 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALG-MHVIGVNTT 169 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CeEEEECcCHHHHHHHHHHHhCC-CEEEEECCC
Confidence 58999999999999999998776 898887643
No 172
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=91.79 E-value=0.15 Score=45.11 Aligned_cols=30 Identities=20% Similarity=0.402 Sum_probs=26.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|||+|+|+||+.+++.+.... +++++.+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d 154 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALG-AQVRGFS 154 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998776 8877665
No 173
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.67 E-value=0.71 Score=40.57 Aligned_cols=85 Identities=16% Similarity=0.232 Sum_probs=48.2
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
++||+|+|.|.+|..+...|.+.. .+|..+. +++....+-+. | ..++..+. .+.. .+... .
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G-~~V~l~~----~~~~~~~i~~~----g----~~~~~~~~-~~~~---~~~~~--~ 79 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAG-HEVILIA----RPQHVQAIEAT----G----LRLETQSF-DEQV---KVSAS--S 79 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTT-CEEEEEC----CHHHHHHHHHH----C----EEEECSSC-EEEE---CCEEE--S
T ss_pred CCcEEEECcCHHHHHHHHHHHHCC-CeEEEEE----cHhHHHHHHhC----C----eEEEcCCC-cEEE---eeeee--C
Confidence 479999999999999999998775 6766662 34433333211 1 11121222 2222 12222 2
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHH
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKA 113 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a 113 (250)
+++.+ .++|+||.|+......+.+
T Consensus 80 ~~~~~----~~~D~vilavk~~~~~~~l 103 (318)
T 3hwr_A 80 DPSAV----QGADLVLFCVKSTDTQSAA 103 (318)
T ss_dssp CGGGG----TTCSEEEECCCGGGHHHHH
T ss_pred CHHHc----CCCCEEEEEcccccHHHHH
Confidence 34333 2689999999877444333
No 174
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=91.67 E-value=0.25 Score=44.39 Aligned_cols=30 Identities=30% Similarity=0.542 Sum_probs=26.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|||+|+|+||+.+++.+..-. +++++.+
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg-~~v~~~d 171 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFG-MKVLCYD 171 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred cEEEEECcchHHHHHHHhhcccC-ceeeecC
Confidence 47999999999999999988776 8887764
No 175
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=91.66 E-value=0.38 Score=42.40 Aligned_cols=90 Identities=18% Similarity=0.223 Sum_probs=58.1
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
+.|++|.| +|+.|+.+++.+.+.+ +++++--++ + . . +. . +.| ++++.
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g-~~~v~~VnP----~---------~-------~-----g~-~--i~G--~~vy~- 60 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYG-TKVVAGVTP----G---------K-------G-----GS-E--VHG--VPVYD- 60 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECT----T---------C-------T-----TC-E--ETT--EEEES-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCC-CcEEEEeCC----C---------C-------C-----Cc-e--ECC--EeeeC-
Confidence 47899999 7999999999988765 776533334 1 0 0 00 1 122 23332
Q ss_pred CCCCCCCcccCC-ccEEEeecCCCCCHHHHHHHHHCCCCEEEE-eCC
Q 025639 85 RNPEEIPWAKTG-AEYVVESTGVFTDKDKAAAHLKGGAKKVVI-SAP 129 (250)
Q Consensus 85 ~~p~~i~w~~~~-vdiV~~~tg~~~~~~~a~~~~~~Gak~vvi-s~~ 129 (250)
+.++++- +.+ +|+++.++......+.++..+++|.+.+|+ |..
T Consensus 61 -sl~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~G 105 (297)
T 2yv2_A 61 -SVKEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITEG 105 (297)
T ss_dssp -SHHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCCC
T ss_pred -CHHHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 2333331 113 899999999888888888999999985554 543
No 176
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=91.58 E-value=0.16 Score=45.97 Aligned_cols=31 Identities=29% Similarity=0.517 Sum_probs=27.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~d~ 191 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFG-MNVLVWGR 191 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhCC-CEEEEECC
Confidence 58999999999999999998776 89887753
No 177
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=91.52 E-value=0.17 Score=45.35 Aligned_cols=31 Identities=26% Similarity=0.535 Sum_probs=26.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d~ 177 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMG-ATVIGEDV 177 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEECC
Confidence 58999999999999999998776 88777653
No 178
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=91.50 E-value=0.18 Score=45.37 Aligned_cols=31 Identities=32% Similarity=0.482 Sum_probs=26.8
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G-~~V~~~d~ 196 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFG-MKTIGYDP 196 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEECC
Confidence 58999999999999999998765 88877764
No 179
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=91.46 E-value=0.17 Score=45.69 Aligned_cols=32 Identities=25% Similarity=0.479 Sum_probs=27.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.+|||+|+|+||+.+++.+.... ++|++.+..
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G-~~V~~~d~~ 180 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMG-AKVIAYDVA 180 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECSS
T ss_pred CeEEEEecCHHHHHHHHHHhhCC-CEEEEECCC
Confidence 58999999999999999998776 898877643
No 180
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=91.40 E-value=0.17 Score=45.30 Aligned_cols=31 Identities=19% Similarity=0.416 Sum_probs=26.5
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+.... +++++.+.
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d~ 176 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFG-AKVIAYDP 176 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEECC
Confidence 58999999999999999998776 88776653
No 181
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.38 E-value=0.18 Score=43.82 Aligned_cols=41 Identities=17% Similarity=0.185 Sum_probs=31.0
Q ss_pred CCceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhh
Q 025639 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYM 49 (250)
Q Consensus 4 ~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~l 49 (250)
.| +||+|+|+|.+|+.+.+.|.+.. ++|+..+. +++....+
T Consensus 2 ~m-~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~d~---~~~~~~~~ 42 (302)
T 2h78_A 2 HM-KQIAFIGLGHMGAPMATNLLKAG-YLLNVFDL---VQSAVDGL 42 (302)
T ss_dssp -C-CEEEEECCSTTHHHHHHHHHHTT-CEEEEECS---SHHHHHHH
T ss_pred CC-CEEEEEeecHHHHHHHHHHHhCC-CeEEEEcC---CHHHHHHH
Confidence 46 69999999999999999999886 78777743 35544443
No 182
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=91.37 E-value=0.42 Score=44.80 Aligned_cols=102 Identities=17% Similarity=0.359 Sum_probs=63.8
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCC--------CChhHHhhhhccc-cccccCCCcceEEeCCeeeEECCE
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPF--------ISTDYMTYMFKYD-SVHGQWKHNELKVKDEKTLLFGEK 77 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~--------~~~~~~a~ll~yd-S~~G~~~~~~v~~~~~~~l~~~g~ 77 (250)
.+|+|=|||.||..+++.|.+.. -.+|++.|.. .|.+.+..+++.. +..|+.. .+... ++.+
T Consensus 236 k~vaVQG~GnVG~~aa~~L~e~G-akvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~----~~~~~----~g~~ 306 (450)
T 4fcc_A 236 MRVSVSGSGNVAQYAIEKAMEFG-ARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVA----DYAKE----FGLV 306 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHH----HHHHH----HTCE
T ss_pred CEEEEeCCChHHHHHHHHHHhcC-CeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccc----ccccc----CCcE
Confidence 58999999999999999999886 8899988652 2344444444221 1111100 00000 1111
Q ss_pred EEEEEecCCCCCCCcccCCccEEEeec-CCCCCHHHHHHHHHCCCCEEEE
Q 025639 78 PVAVFGFRNPEEIPWAKTGAEYVVEST-GVFTDKDKAAAHLKGGAKKVVI 126 (250)
Q Consensus 78 ~i~v~~~~~p~~i~w~~~~vdiV~~~t-g~~~~~~~a~~~~~~Gak~vvi 126 (250)
.. ++++ .|. .++||.+=|+ +..++.+.++...+.|||- |+
T Consensus 307 ---~~---~~~~-i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~-Ia 347 (450)
T 4fcc_A 307 ---YL---EGQQ-PWS-VPVDIALPCATQNELDVDAAHQLIANGVKA-VA 347 (450)
T ss_dssp ---EE---ETCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCE-EE
T ss_pred ---Ee---cCcc-ccc-CCccEEeeccccccccHHHHHHHHhcCceE-Ee
Confidence 11 1233 265 5899999887 7788999998887788853 44
No 183
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=91.30 E-value=0.19 Score=45.32 Aligned_cols=30 Identities=33% Similarity=0.457 Sum_probs=25.9
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|||+|+|+||+.+++.+.... ++|++.+
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G-~~V~~~d 201 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFG-MSVRYWN 201 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEc
Confidence 58999999999999999998765 8877665
No 184
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.27 E-value=0.22 Score=44.05 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=27.4
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
|++||+|+|+|.+|..+.+.|.+...++|+..+
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~d 55 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYD 55 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEEC
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEe
Confidence 668999999999999999999877436776665
No 185
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=91.26 E-value=0.17 Score=45.84 Aligned_cols=31 Identities=29% Similarity=0.395 Sum_probs=26.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G-~~V~~~dr 195 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFG-CNLLYHDR 195 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGC-CEEEEECS
T ss_pred CEEeEEEeCHHHHHHHHHHHHCC-CEEEEeCC
Confidence 58999999999999999998765 88777763
No 186
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=91.26 E-value=0.15 Score=45.01 Aligned_cols=31 Identities=35% Similarity=0.559 Sum_probs=26.8
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~dr 153 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFG-MRVIAYTR 153 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEECS
T ss_pred chheeeccCchhHHHHHHHHhhC-cEEEEEec
Confidence 58999999999999999998765 88877754
No 187
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=91.21 E-value=0.062 Score=46.42 Aligned_cols=33 Identities=15% Similarity=0.225 Sum_probs=21.4
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|+|||+|+|.|.+|+.+++.|.+. ++++.+.+.
T Consensus 1 M~m~I~iIG~G~mG~~la~~l~~~--~~v~~v~~~ 33 (276)
T 2i76_A 1 MSLVLNFVGTGTLTRFFLECLKDR--YEIGYILSR 33 (276)
T ss_dssp ---CCEEESCCHHHHHHHHTTC------CCCEECS
T ss_pred CCceEEEEeCCHHHHHHHHHHHHc--CcEEEEEeC
Confidence 557999999999999999987765 676444444
No 188
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.19 E-value=0.2 Score=43.15 Aligned_cols=33 Identities=21% Similarity=0.393 Sum_probs=26.6
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|+|||+|+|.|.+|..+...|.+.. .+|+.++.
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~r 34 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGG-NDVTLIDQ 34 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCC-CcEEEEEC
Confidence 3479999999999999999998876 68777653
No 189
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=91.16 E-value=0.2 Score=44.53 Aligned_cols=31 Identities=32% Similarity=0.553 Sum_probs=27.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+...+ ++|++.+.
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d~ 177 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFD-MDIDYFDT 177 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEECC
Confidence 58999999999999999998766 88887764
No 190
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=91.14 E-value=0.36 Score=42.51 Aligned_cols=90 Identities=21% Similarity=0.247 Sum_probs=57.4
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 6 KIKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
..|++|.| +|+.|+.+++.+.+.+ +++++--++ + . . +. . +.| ++++.
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~g-~~~V~~VnP----~---------~-------~-----g~-~--i~G--~~vy~- 60 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLECG-TKIVGGVTP----G---------K-------G-----GQ-N--VHG--VPVFD- 60 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHTT-CCEEEEECT----T---------C-------T-----TC-E--ETT--EEEES-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCC-CeEEEEeCC----C---------C-------C-----Cc-e--ECC--EeeeC-
Confidence 46899999 7999999999988875 776533334 1 0 0 00 1 122 23332
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEE-eCC
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVI-SAP 129 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvi-s~~ 129 (250)
+.++++- +.++|+++.+++.....+.++..+++|++.+|+ +..
T Consensus 61 -sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~G 104 (294)
T 2yv1_A 61 -TVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITEH 104 (294)
T ss_dssp -SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred -CHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 2333321 125899999998887888888888999985554 543
No 191
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=91.11 E-value=0.21 Score=45.19 Aligned_cols=30 Identities=30% Similarity=0.444 Sum_probs=26.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|||+|+|+||+.+++.+.... ++|++.+
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G-~~V~~~d 198 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFG-FNVLFYD 198 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998776 8877765
No 192
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=91.11 E-value=0.15 Score=45.63 Aligned_cols=31 Identities=23% Similarity=0.257 Sum_probs=26.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G-~~V~~~d~ 176 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWG-ATLQYHEA 176 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSC-CEEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEECC
Confidence 58999999999999999987665 88877754
No 193
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.02 E-value=0.28 Score=38.09 Aligned_cols=31 Identities=10% Similarity=0.038 Sum_probs=27.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|.|.|+|++|+.+++.|.+.. .+++.|..
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g-~~V~vid~ 34 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRG-QNVTVISN 34 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC-CCEEEEEC
Confidence 47999999999999999998876 78888864
No 194
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=90.96 E-value=1 Score=41.99 Aligned_cols=32 Identities=34% Similarity=0.625 Sum_probs=29.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.||+|-|||-||+.+++.|.+.. ..+|+|.|.
T Consensus 236 ~~vaVqGfGnVG~~~a~~L~e~G-akvVavsD~ 267 (440)
T 3aog_A 236 ARVAIQGFGNVGNAAARAFHDHG-ARVVAVQDH 267 (440)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEECS
T ss_pred CEEEEeccCHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 68999999999999999999886 999999987
No 195
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.96 E-value=0.17 Score=41.86 Aligned_cols=31 Identities=29% Similarity=0.329 Sum_probs=27.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|||.|.|+|++|+.+++.|.++. .+++.+..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g-~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK-YGVVIINK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEEC
Confidence 47999999999999999999876 78888864
No 196
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.95 E-value=0.22 Score=43.48 Aligned_cols=41 Identities=20% Similarity=0.336 Sum_probs=31.1
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhh
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYM 49 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~l 49 (250)
|++||+|+|+|.+|+.+.+.|.+.. ++|+..+. +++.+..+
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~dr---~~~~~~~~ 46 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAG-LSTWGADL---NPQACANL 46 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS---CHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CeEEEEEC---CHHHHHHH
Confidence 4579999999999999999999886 78777753 45544433
No 197
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=90.93 E-value=0.19 Score=45.77 Aligned_cols=31 Identities=29% Similarity=0.507 Sum_probs=26.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG-~~V~~~d~ 207 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFR-ARIRVFDP 207 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSC-CEEEEECS
T ss_pred CEEEEecCCcccHHHHHhhhhCC-CEEEEECC
Confidence 58999999999999999987665 88877753
No 198
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.90 E-value=0.2 Score=46.72 Aligned_cols=42 Identities=12% Similarity=0.270 Sum_probs=32.1
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
|+|||+|+|+|.+|..+...|.+.. ++|+.++- +++.+..+-
T Consensus 1 M~mkI~VIG~G~vG~~lA~~La~~G-~~V~~~D~---~~~~v~~l~ 42 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLVSATCFAELG-ANVRCIDT---DRNKIEQLN 42 (450)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS---CHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhcC-CEEEEEEC---CHHHHHHHH
Confidence 5679999999999999999999886 78887753 455444443
No 199
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=90.89 E-value=0.21 Score=44.25 Aligned_cols=31 Identities=35% Similarity=0.595 Sum_probs=26.3
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+.... +++++.+.
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d~ 175 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFG-MRVVYHAR 175 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHCC-CEEEEECC
Confidence 58999999999999999998776 78776653
No 200
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.84 E-value=0.24 Score=42.07 Aligned_cols=32 Identities=19% Similarity=0.304 Sum_probs=26.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|||+|+|+|.+|+.+++.+.+.+ +++|.+-+.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g-~~~v~~~~~ 42 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKG-FRIVQVYSR 42 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT-CCEEEEECS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCC-CeEEEEEeC
Confidence 68999999999999999988765 775555554
No 201
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=90.83 E-value=0.24 Score=46.03 Aligned_cols=32 Identities=31% Similarity=0.578 Sum_probs=29.2
Q ss_pred eeEEEEcCChHHHHHHHHHHc-CCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQ-RDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~-~~~~~vvaind~ 39 (250)
.+|+|.|||.||+.+++.+.. .. +.+++++|+
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~G-~kVv~~sD~ 245 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDFG-MKVVAVSDS 245 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEEEECS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhcC-CEEEEEeCC
Confidence 589999999999999999988 65 999999887
No 202
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=90.72 E-value=0.18 Score=43.36 Aligned_cols=34 Identities=26% Similarity=0.290 Sum_probs=26.6
Q ss_pred CC-ceeEEEEcCChHHHHHHHHHHcCC-CceEEEee
Q 025639 4 DK-KIKIGINGFGRIGRLVARVALQRD-DVELVAVN 37 (250)
Q Consensus 4 ~m-~~kVaI~G~G~IGr~~lr~l~~~~-~~~vvain 37 (250)
.| ++||+|+|+|.+|+.+++.|.+.. ..+++..+
T Consensus 3 ~M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d 38 (290)
T 3b1f_A 3 AMEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYN 38 (290)
T ss_dssp GGCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred ccccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEc
Confidence 35 379999999999999999988653 36766554
No 203
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=90.68 E-value=0.23 Score=43.92 Aligned_cols=31 Identities=39% Similarity=0.612 Sum_probs=26.9
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d~ 173 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALG-MNILLYDP 173 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred ceEEEEccCHHHHHHHHHHHHCC-CEEEEECC
Confidence 58999999999999999998776 88877754
No 204
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.65 E-value=0.22 Score=41.30 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=26.3
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+.+||+|+|+|.+|+.+++.|.+.+ .+++.++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g-~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSG-FKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 3479999999999999999998776 67766653
No 205
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.65 E-value=0.23 Score=43.79 Aligned_cols=31 Identities=29% Similarity=0.266 Sum_probs=26.9
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+||+|+|+|.+|+.+.+.|.+.. ++|+..+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~d 61 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAG-YALQVWN 61 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTT-CEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHhCC-CeEEEEc
Confidence 369999999999999999999886 7877665
No 206
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=90.62 E-value=0.17 Score=44.04 Aligned_cols=32 Identities=19% Similarity=0.308 Sum_probs=27.2
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
++||+|+|+|.+|+.+.+.|.+.. ++|+..+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G-~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWP-GGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTST-TCEEEECS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCC-CeEEEEeC
Confidence 468999999999999999998876 78777753
No 207
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=90.51 E-value=0.24 Score=43.89 Aligned_cols=31 Identities=39% Similarity=0.559 Sum_probs=26.9
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+...+ +++++.+.
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d~ 173 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMG-MKVLAYDI 173 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEECC
Confidence 58999999999999999998776 88877754
No 208
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.50 E-value=0.21 Score=43.82 Aligned_cols=34 Identities=32% Similarity=0.469 Sum_probs=28.2
Q ss_pred CCceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 4 ~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.|+-|||++|+|.+|..+.+.|.+.. ++|++.|.
T Consensus 3 ~Ms~kIgfIGLG~MG~~mA~~L~~~G-~~V~v~dr 36 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGTPIAEILLEAG-YELVVWNR 36 (297)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHHTT-CEEEEC--
T ss_pred CCCCcEEEEecHHHHHHHHHHHHHCC-CeEEEEeC
Confidence 47779999999999999999999887 88877663
No 209
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=90.45 E-value=0.24 Score=45.46 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=26.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|||+|+|+||+.+++.+.... ++|++.+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G-~~V~~~d 149 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALG-IRTLLCD 149 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998776 8887774
No 210
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=90.43 E-value=0.24 Score=45.39 Aligned_cols=30 Identities=17% Similarity=0.303 Sum_probs=26.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|||+|+|+||+.+++.|.... +++++.+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~d 146 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLG-WKVLVCD 146 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHHHHCC-CEEEEEc
Confidence 58999999999999999998776 8877764
No 211
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=90.43 E-value=0.25 Score=43.64 Aligned_cols=34 Identities=15% Similarity=0.249 Sum_probs=27.4
Q ss_pred CCceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 4 ~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
||.+||+|+|.|.+|..+.+.|.+.. .+|..++.
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G-~~V~~~~r 45 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENG-EEVILWAR 45 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCC-CeEEEEeC
Confidence 58899999999999999999998775 67666654
No 212
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=90.41 E-value=0.24 Score=44.28 Aligned_cols=31 Identities=16% Similarity=0.356 Sum_probs=26.9
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d~ 177 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFG-AKVITYDI 177 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEECC
Confidence 58999999999999999998776 88877764
No 213
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=90.38 E-value=0.24 Score=45.66 Aligned_cols=31 Identities=26% Similarity=0.360 Sum_probs=26.8
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+.... +++++.+.
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G-~~V~~~d~ 176 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLG-MYVYFYDI 176 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEEcC
Confidence 58999999999999999998776 88877753
No 214
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=90.37 E-value=0.28 Score=46.01 Aligned_cols=42 Identities=19% Similarity=0.183 Sum_probs=33.9
Q ss_pred eeEEEEc-CChHHHHHHHHHHc---CC-CceEEEeeCCCCChhHHhhh
Q 025639 7 IKIGING-FGRIGRLVARVALQ---RD-DVELVAVNDPFISTDYMTYM 49 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~---~~-~~~vvaind~~~~~~~~a~l 49 (250)
.||.|.| ||.||++.++.+.+ +| .|+|+++..- .+.+.++..
T Consensus 78 k~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg-~Nv~lL~eQ 124 (488)
T 3au8_A 78 INVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVN-KSVNELYEQ 124 (488)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEES-SCHHHHHHH
T ss_pred eEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcC-CCHHHHHHH
Confidence 4799999 99999999999988 44 4999999864 666655543
No 215
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=90.31 E-value=0.27 Score=44.27 Aligned_cols=31 Identities=29% Similarity=0.386 Sum_probs=26.4
Q ss_pred eeEEEEcCChHHHHHHHHHH-cCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVAL-QRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~-~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+. ... ++|++.+.
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G-~~V~~~d~ 195 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLG-MKLVYYDV 195 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHhcC-CEEEEECC
Confidence 58999999999999999998 765 88777653
No 216
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.14 E-value=0.36 Score=37.62 Aligned_cols=31 Identities=35% Similarity=0.488 Sum_probs=27.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|.|.|+|.+|+.+++.|.+.. .+++.+..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g-~~V~vid~ 50 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSG-HSVVVVDK 50 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCC-CeEEEEEC
Confidence 68999999999999999998876 78887754
No 217
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=90.13 E-value=0.24 Score=44.13 Aligned_cols=31 Identities=32% Similarity=0.462 Sum_probs=26.6
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
++|||+|+|.||+.+++.+.... ++|++.+.
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G-~~V~~~d~ 186 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFG-VQRFLYTG 186 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CCEEEEES
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEECC
Confidence 58999999999999999998765 78777763
No 218
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=90.04 E-value=0.25 Score=44.31 Aligned_cols=30 Identities=37% Similarity=0.488 Sum_probs=25.5
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|||+|+|+||+.+++.+.... ++|++.+
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G-~~V~~~d 194 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFD-CPISYFS 194 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998765 7876654
No 219
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=89.97 E-value=0.28 Score=43.79 Aligned_cols=31 Identities=32% Similarity=0.528 Sum_probs=26.8
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
++|||+|+|.||+.+++.+.... ++|++.+.
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G-~~V~~~d~ 181 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFN-MRILYYSR 181 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHhCC-CEEEEECC
Confidence 58999999999999999998776 88777654
No 220
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=89.95 E-value=0.21 Score=42.35 Aligned_cols=34 Identities=15% Similarity=0.314 Sum_probs=28.3
Q ss_pred CCceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 4 DKKIKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 4 ~m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.|+|||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 3 ~M~m~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 37 (287)
T 3sc6_A 3 AMKERVIITGANGQLGKQLQEELNPEE-YDIYPFDK 37 (287)
T ss_dssp --CEEEEEESTTSHHHHHHHHHSCTTT-EEEEEECT
T ss_pred cceeEEEEECCCCHHHHHHHHHHHhCC-CEEEEecc
Confidence 4777999999 9999999999998886 88888754
No 221
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.87 E-value=0.58 Score=41.44 Aligned_cols=33 Identities=30% Similarity=0.322 Sum_probs=24.5
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCc-eEEEeeCC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~-~vvaind~ 39 (250)
++||+|+|.|.||..++..|..++-+ +++-+ |.
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~-Di 39 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVII-DL 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEE-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEE-eC
Confidence 47999999999999988888766522 44444 44
No 222
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=89.86 E-value=0.18 Score=42.64 Aligned_cols=32 Identities=25% Similarity=0.449 Sum_probs=26.2
Q ss_pred eEEEEc-CChHHHHHHHHHHcC-CCceEEEeeCC
Q 025639 8 KIGING-FGRIGRLVARVALQR-DDVELVAVNDP 39 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~-~~~~vvaind~ 39 (250)
||.|.| +|.||+.+++.|.++ +..+|+++...
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 34 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRN 34 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcC
Confidence 578999 999999999999887 23888887643
No 223
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=89.82 E-value=0.22 Score=42.82 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=26.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
|||+|+|+|.+|+.+++.|.+.. ++|+.++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAG-HQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTT-CEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCC-CEEEEEc
Confidence 69999999999999999998775 7877665
No 224
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=89.80 E-value=0.12 Score=44.19 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=28.9
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
..|||+|+|.|.+|..+.+.|.+.. ++|++++.+
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G-~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVG-HYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTT-CEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCC-CEEEEecCH
Confidence 3479999999999999999999886 888887653
No 225
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=89.79 E-value=0.28 Score=43.93 Aligned_cols=31 Identities=35% Similarity=0.516 Sum_probs=26.5
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|.||+.+++.+.... +++++.+.
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G-~~V~~~d~ 177 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFG-VKLYYWSR 177 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEECC
Confidence 58999999999999999988765 88777653
No 226
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.69 E-value=0.28 Score=36.81 Aligned_cols=31 Identities=23% Similarity=0.386 Sum_probs=26.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|.|.|.|.+|+.+++.|.+.+ .+++.+..
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g-~~v~~~d~ 37 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMG-HEVLAVDI 37 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 47999999999999999998876 67766653
No 227
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=89.55 E-value=0.29 Score=45.08 Aligned_cols=31 Identities=32% Similarity=0.388 Sum_probs=26.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G-~~V~~~d~ 222 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFD-VHLHYTDR 222 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhCC-CEEEEEcC
Confidence 58999999999999999988765 88877754
No 228
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=89.40 E-value=0.36 Score=40.79 Aligned_cols=32 Identities=25% Similarity=0.521 Sum_probs=26.7
Q ss_pred eEEEEc-CChHHHHHHHHHHcC-CCceEEEeeCC
Q 025639 8 KIGING-FGRIGRLVARVALQR-DDVELVAVNDP 39 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~-~~~~vvaind~ 39 (250)
||.|.| +|.||+.+++.|.++ +..+|+++...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 35 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRN 35 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcC
Confidence 689999 999999999999887 23888887653
No 229
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=89.39 E-value=0.47 Score=44.49 Aligned_cols=94 Identities=9% Similarity=0.083 Sum_probs=54.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~ 86 (250)
.||.|.|.|.+|+.+++.|.+++.++|+.++.. ++....+.+. . + +. .+.+ ...+
T Consensus 24 k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~---~~ka~~la~~---~------------~--~~----~~~~-D~~d 78 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLAANDDINVTVACRT---LANAQALAKP---S------------G--SK----AISL-DVTD 78 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSTTEEEEEEESS---HHHHHHHHGG---G------------T--CE----EEEC-CTTC
T ss_pred CEEEEECChHHHHHHHHHHHhCCCCeEEEEECC---HHHHHHHHHh---c------------C--Cc----EEEE-ecCC
Confidence 589999999999999999998855887666643 3322222210 0 0 00 0000 0001
Q ss_pred CCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEe
Q 025639 87 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (250)
Q Consensus 87 p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis 127 (250)
++++.-...++|+|+.|+|.+.........+++|. .+++
T Consensus 79 ~~~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~--~vvd 117 (467)
T 2axq_A 79 DSALDKVLADNDVVISLIPYTFHPNVVKSAIRTKT--DVVT 117 (467)
T ss_dssp HHHHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTC--EEEE
T ss_pred HHHHHHHHcCCCEEEECCchhhhHHHHHHHHhcCC--EEEE
Confidence 11111001268999999998765555556677776 4554
No 230
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=89.35 E-value=0.34 Score=40.93 Aligned_cols=36 Identities=28% Similarity=0.454 Sum_probs=27.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHH
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYM 46 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~ 46 (250)
|||+|+|+|.+|+.+++.|.+.+ .++. +.+. +++..
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~v~-~~~~--~~~~~ 39 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HELI-ISGS--SLERS 39 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CEEE-EECS--SHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-CeEE-EECC--CHHHH
Confidence 69999999999999999998776 5554 4444 44433
No 231
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.29 E-value=0.39 Score=40.60 Aligned_cols=32 Identities=25% Similarity=0.336 Sum_probs=27.3
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+||||+|+|.+|+.+++.|.+.. ++|+..+.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G-~~V~~~~r 50 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLG-HEVTIGTR 50 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 479999999999999999999876 78776653
No 232
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=89.29 E-value=0.36 Score=41.56 Aligned_cols=30 Identities=23% Similarity=0.402 Sum_probs=26.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+||+|+|+|.+|+.+.+.|.+.. ++|+..+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G-~~V~~~d 31 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG-CSVTIWN 31 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CeEEEEc
Confidence 58999999999999999999886 7877664
No 233
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.28 E-value=0.36 Score=42.46 Aligned_cols=34 Identities=18% Similarity=0.246 Sum_probs=27.1
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|+|||+|+|.|.+|..+...|.+.. .+|..+...
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r~ 34 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTG-HCVSVVSRS 34 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTT-CEEEEECST
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC-CeEEEEeCC
Confidence 6789999999999999999988775 677777543
No 234
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.27 E-value=0.38 Score=41.09 Aligned_cols=31 Identities=16% Similarity=0.210 Sum_probs=25.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCC-CceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRD-DVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~-~~~vvain 37 (250)
+||+|+|+|.+|+.+++.|.+.. ..+|++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d 33 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYD 33 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEe
Confidence 58999999999999999998765 13766654
No 235
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=89.25 E-value=3 Score=35.73 Aligned_cols=32 Identities=13% Similarity=0.154 Sum_probs=27.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++|.|-| +|.||+.+++.|.+++ .+|+++...
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 44 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHG-YKVRGTARS 44 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 6899999 9999999999999886 788877643
No 236
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.04 E-value=0.33 Score=42.46 Aligned_cols=41 Identities=20% Similarity=0.401 Sum_probs=31.3
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
.+||+|+|+|.+|+.+.+.|.+.. ++|+..+. +++....+.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G-~~V~~~dr---~~~~~~~~~ 49 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQG-KRVAIWNR---SPGKAAALV 49 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTT-CCEEEECS---SHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHH
Confidence 468999999999999999999876 78777653 455444443
No 237
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=89.02 E-value=0.4 Score=41.05 Aligned_cols=31 Identities=23% Similarity=0.396 Sum_probs=27.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|||.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G-~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG-HEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 5899999 9999999999999887 88888764
No 238
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=88.98 E-value=0.43 Score=38.70 Aligned_cols=32 Identities=34% Similarity=0.474 Sum_probs=27.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|||.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG-HEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC-CEEEEEEec
Confidence 4799999 9999999999999886 788888654
No 239
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=88.97 E-value=0.39 Score=42.47 Aligned_cols=37 Identities=22% Similarity=0.294 Sum_probs=28.4
Q ss_pred CCCCceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 2 AGDKKIKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 2 ~~~m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.++|+++|.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 20 ~~~M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 57 (375)
T 1t2a_A 20 QGHMRNVALITGITGQDGSYLAEFLLEKG-YEVHGIVRR 57 (375)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred HhhcCcEEEEECCCchHHHHHHHHHHHCC-CEEEEEECC
Confidence 456766899999 9999999999999886 788877643
No 240
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.88 E-value=0.31 Score=38.90 Aligned_cols=31 Identities=23% Similarity=0.204 Sum_probs=26.9
Q ss_pred eeEEEEcCChHHHHHHHHHHcC-CCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQR-DDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~-~~~~vvaind 38 (250)
.+|.|.|+|++|+.+++.|.+. . .+++++..
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g-~~V~vid~ 71 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYG-KISLGIEI 71 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHC-SCEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhccC-CeEEEEEC
Confidence 5899999999999999999876 6 78888864
No 241
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=88.85 E-value=0.19 Score=45.64 Aligned_cols=92 Identities=16% Similarity=0.152 Sum_probs=54.3
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~ 86 (250)
.||+|.|.|.+|+.+++.|.++ .+++..+ . +++....+.+ .. + .+.++ + .+
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~-R--~~~~a~~la~-----------~~----~-~~~~d-----~---~~ 67 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE--FDVYIGD-V--NNENLEKVKE-----------FA----T-PLKVD-----A---SN 67 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--SEEEEEE-S--CHHHHHHHTT-----------TS----E-EEECC-----T---TC
T ss_pred CeEEEEcCCHHHHHHHHHHHcC--CeEEEEE-C--CHHHHHHHHh-----------hC----C-eEEEe-----c---CC
Confidence 6899999999999999999876 6765444 3 3443333220 00 0 01110 0 01
Q ss_pred CCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCC
Q 025639 87 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (250)
Q Consensus 87 p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~ 129 (250)
.+++.---.++|+|+.|++.....+-+...+++|+ .+++.+
T Consensus 68 ~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~--~~vD~s 108 (365)
T 2z2v_A 68 FDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp HHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTC--CEEECC
T ss_pred HHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCC--eEEEcc
Confidence 11110001268999999987666666778888997 566544
No 242
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=88.76 E-value=0.38 Score=44.63 Aligned_cols=30 Identities=27% Similarity=0.451 Sum_probs=26.5
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|||+|+|+||+.+++.+.... ++|++.+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G-~~V~~yd 186 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLG-MTVRYYD 186 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998776 8887775
No 243
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=88.62 E-value=0.34 Score=45.79 Aligned_cols=43 Identities=14% Similarity=0.223 Sum_probs=33.2
Q ss_pred CCceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 4 ~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
||+.||||+|+|.+|+.+++.|.++. ++|+..|.. ++.+..+.
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~G-~~V~v~dr~---~~~~~~l~ 50 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADHG-FTVCAYNRT---QSKVDHFL 50 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTT-CCEEEECSS---SHHHHHHH
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHCC-CEEEEEeCC---HHHHHHHH
Confidence 59899999999999999999999886 788777643 44444443
No 244
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.60 E-value=0.42 Score=41.83 Aligned_cols=31 Identities=19% Similarity=0.457 Sum_probs=27.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+||+|+|+|.+|+.+.+.|.+.. ++|+..+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G-~~V~~~dr 52 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNG-FKVTVWNR 52 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEECccHHHHHHHHHHHHCC-CeEEEEeC
Confidence 69999999999999999999886 78777653
No 245
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=88.58 E-value=0.51 Score=40.97 Aligned_cols=32 Identities=25% Similarity=0.252 Sum_probs=26.9
Q ss_pred CCceeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 4 ~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+| .||+|+|.|.+|..++..+.... ++|+.++
T Consensus 14 ~~-~~I~VIG~G~mG~~iA~~la~~G-~~V~~~d 45 (302)
T 1f0y_A 14 IV-KHVTVIGGGLMGAGIAQVAAATG-HTVVLVD 45 (302)
T ss_dssp CC-CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred cC-CEEEEECCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 44 58999999999999999998876 7877664
No 246
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=88.57 E-value=0.34 Score=41.37 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=24.9
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+||+|+|+|.+|+.+++.|.+ . ++++.++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g-~~V~~~~ 30 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-R-FPTLVWN 30 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-T-SCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHhC-C-CeEEEEe
Confidence 589999999999999999887 5 7876664
No 247
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=88.55 E-value=0.41 Score=42.14 Aligned_cols=43 Identities=21% Similarity=0.263 Sum_probs=32.2
Q ss_pred CCCceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 3 GDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 3 ~~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
+.|+ |||++|+|.+|..+++.|.+.. +++.+.|.. ++-...+.
T Consensus 1 G~M~-kIgfIGlG~MG~~mA~~L~~~G-~~v~v~dr~---~~~~~~l~ 43 (300)
T 3obb_A 1 GHMK-QIAFIGLGHMGAPMATNLLKAG-YLLNVFDLV---QSAVDGLV 43 (300)
T ss_dssp --CC-EEEEECCSTTHHHHHHHHHHTT-CEEEEECSS---HHHHHHHH
T ss_pred CCcC-EEEEeeehHHHHHHHHHHHhCC-CeEEEEcCC---HHHHHHHH
Confidence 4574 9999999999999999999886 888777643 55444443
No 248
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=88.44 E-value=1.8 Score=38.13 Aligned_cols=91 Identities=18% Similarity=0.230 Sum_probs=50.3
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCc-eEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCC
Q 025639 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~-~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~ 86 (250)
+|.|.|.|.||...++++.... . +|+++.. +++-+.++.++ | .+ ..++-+.-.+.+ .
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~---~~~~~~~~~~l----G----a~--------~vi~~~~~~~~~--~ 226 (352)
T 3fpc_A 169 TVCVIGIGPVGLMSVAGANHLG-AGRIFAVGS---RKHCCDIALEY----G----AT--------DIINYKNGDIVE--Q 226 (352)
T ss_dssp CEEEECCSHHHHHHHHHHHTTT-CSSEEEECC---CHHHHHHHHHH----T----CC--------EEECGGGSCHHH--H
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CcEEEEECC---CHHHHHHHHHh----C----Cc--------eEEcCCCcCHHH--H
Confidence 6899999999999999888766 5 6777643 34433333322 2 00 111100000000 0
Q ss_pred CCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCC
Q 025639 87 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGA 121 (250)
Q Consensus 87 p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Ga 121 (250)
..++. +..++|+||||+|.....+.+-..++.|-
T Consensus 227 v~~~t-~g~g~D~v~d~~g~~~~~~~~~~~l~~~G 260 (352)
T 3fpc_A 227 ILKAT-DGKGVDKVVIAGGDVHTFAQAVKMIKPGS 260 (352)
T ss_dssp HHHHT-TTCCEEEEEECSSCTTHHHHHHHHEEEEE
T ss_pred HHHHc-CCCCCCEEEECCCChHHHHHHHHHHhcCC
Confidence 00000 11379999999998655666666776664
No 249
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=88.40 E-value=0.36 Score=43.81 Aligned_cols=31 Identities=26% Similarity=0.245 Sum_probs=26.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCce-EEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVE-LVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~-vvaind 38 (250)
.+|||+|+|+||+.+++.+.... ++ |++.+.
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G-~~~V~~~d~ 196 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFN-PKELLYYDY 196 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGC-CSEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CcEEEEECC
Confidence 58999999999999999988765 76 877753
No 250
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=88.25 E-value=0.44 Score=40.99 Aligned_cols=30 Identities=37% Similarity=0.589 Sum_probs=25.6
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+||+|+|+|.+|+.+++.|.+.. ++++.++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 34 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEG-VTVYAFD 34 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHCC-CeEEEEe
Confidence 68999999999999999998775 7876554
No 251
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.20 E-value=0.48 Score=40.39 Aligned_cols=30 Identities=37% Similarity=0.540 Sum_probs=25.6
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
|||+|+|+|.+|+.+++.|.+.. ++|+.++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 30 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG-HYLIGVS 30 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC-CEEEEEE
Confidence 48999999999999999998876 6876664
No 252
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.20 E-value=0.3 Score=42.11 Aligned_cols=31 Identities=19% Similarity=0.328 Sum_probs=26.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+||+|+|+|.+|+.+.+.|.+.. ++|+..+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG-FDVTVWNR 32 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT-CCEEEECS
T ss_pred CeEEEEccCHHHHHHHHHHHHCC-CeEEEEcC
Confidence 58999999999999999998876 77776653
No 253
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=88.10 E-value=0.56 Score=38.12 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=26.5
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|||+|.| +|.+|+.+++.|.++. .+++.++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG-HEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEES
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 4899999 9999999999998876 78777754
No 254
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.03 E-value=0.5 Score=41.16 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=26.9
Q ss_pred CCceeEEEEc-CChHHHHHHHHHHcCCCceEEEee
Q 025639 4 DKKIKIGING-FGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 4 ~m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+|..||+|+| +|.+|..+.+.|.+.. +++..++
T Consensus 19 ~~~~~I~iIGg~G~mG~~la~~l~~~G-~~V~~~~ 52 (298)
T 2pv7_A 19 SDIHKIVIVGGYGKLGGLFARYLRASG-YPISILD 52 (298)
T ss_dssp TTCCCEEEETTTSHHHHHHHHHHHTTT-CCEEEEC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 3556999999 9999999999998776 6766554
No 255
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.92 E-value=0.51 Score=41.03 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=26.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|+|+|+|.||+.+++.+.... ++|++.+.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~dr 186 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG-AKVKVGAR 186 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEEEC
Confidence 58999999999999999998776 78777764
No 256
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.89 E-value=1.1 Score=39.27 Aligned_cols=31 Identities=29% Similarity=0.426 Sum_probs=24.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCC-CceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRD-DVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~-~~~vvain 37 (250)
|||+|+|.|.+|..++..|...+ ..+|+.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D 32 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLD 32 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 48999999999999999888753 35666553
No 257
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=87.78 E-value=0.47 Score=38.12 Aligned_cols=34 Identities=15% Similarity=0.236 Sum_probs=28.1
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCCc-eEEEeeC
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDDV-ELVAVND 38 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~~-~vvaind 38 (250)
|.+||.|.| +|.||+.+++.|.+++.+ +|+++..
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r 39 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR 39 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBS
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 557999999 999999999999988743 7766654
No 258
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=87.76 E-value=0.87 Score=40.22 Aligned_cols=127 Identities=12% Similarity=0.237 Sum_probs=68.5
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCCC
Q 025639 8 KIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNP 87 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~p 87 (250)
+|.|+|.|.||...++++.... .+++++... ++.+.++.+ +| . + .+ + .++
T Consensus 179 ~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~---~~~~~~~~~----lG--a--------~-~v-~----------~~~ 228 (348)
T 3two_A 179 KVGVAGFGGLGSMAVKYAVAMG-AEVSVFARN---EHKKQDALS----MG--V--------K-HF-Y----------TDP 228 (348)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT-CEEEEECSS---STTHHHHHH----TT--C--------S-EE-E----------SSG
T ss_pred EEEEECCcHHHHHHHHHHHHCC-CeEEEEeCC---HHHHHHHHh----cC--C--------C-ee-c----------CCH
Confidence 7999999999999999888776 688877543 222223321 12 0 1 11 1 122
Q ss_pred CCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCC-CCCCeEEeecCccc-c-CCCCCEEecCChhhhhHHH
Q 025639 88 EEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS-KDAPMFVVGVNEKE-Y-KPELDIVSNASCTTNCLAP 164 (250)
Q Consensus 88 ~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s-~d~p~iV~gVN~~~-~-~~~~~IIs~~sCtT~~la~ 164 (250)
+.+ .+ ++|+||||+|.....+.+-..++.|-+-+++..+. .+.+. +|... + ..+..+...-..+...+.-
T Consensus 229 ~~~--~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~----~~~~~~~~~~~~~i~g~~~~~~~~~~~ 301 (348)
T 3two_A 229 KQC--KE-ELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPV----LSVFDFIHLGNRKVYGSLIGGIKETQE 301 (348)
T ss_dssp GGC--CS-CEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCE----EEHHHHHHTCSCEEEECCSCCHHHHHH
T ss_pred HHH--hc-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCccc----CCHHHHHhhCCeEEEEEecCCHHHHHH
Confidence 222 22 79999999998766666666666554333332222 22221 22111 1 2234455444444445555
Q ss_pred HHHHHHh
Q 025639 165 LAKVIHD 171 (250)
Q Consensus 165 ~l~~L~~ 171 (250)
+++.+.+
T Consensus 302 ~~~l~~~ 308 (348)
T 3two_A 302 MVDFSIK 308 (348)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5555543
No 259
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=87.62 E-value=1.6 Score=35.75 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=26.7
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCc-eEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDV-ELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~-~vvaind 38 (250)
++|.|.| +|.||+.+++.|.+++.+ +|+++..
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r 52 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGR 52 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEc
Confidence 5799999 999999999999988733 7777754
No 260
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=87.61 E-value=0.4 Score=41.95 Aligned_cols=34 Identities=15% Similarity=0.228 Sum_probs=25.8
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|++||+|+|.|.+|..+...|.+.. .+|..+...
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r~ 34 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSG-EDVHFLLRR 34 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTS-CCEEEECST
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC-CeEEEEEcC
Confidence 6689999999999999999988775 676666543
No 261
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=87.56 E-value=0.49 Score=42.59 Aligned_cols=42 Identities=21% Similarity=0.171 Sum_probs=31.8
Q ss_pred CCceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhh
Q 025639 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYM 49 (250)
Q Consensus 4 ~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~l 49 (250)
++..||+|+|+|.+|..+.+.|.+.. ++|++.+. +++.+..+
T Consensus 6 ~~~~kIgIIG~G~mG~slA~~L~~~G-~~V~~~dr---~~~~~~~a 47 (341)
T 3ktd_A 6 DISRPVCILGLGLIGGSLLRDLHAAN-HSVFGYNR---SRSGAKSA 47 (341)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHTT-CCEEEECS---CHHHHHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHH
Confidence 44579999999999999999999876 78777653 45544433
No 262
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=87.51 E-value=0.98 Score=40.54 Aligned_cols=32 Identities=31% Similarity=0.310 Sum_probs=24.8
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCc-eEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~-~vvaind~ 39 (250)
+||+|.|.|.||..++..+..++-+ +++-+ |.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~-Di 54 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALV-DV 54 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEE-CS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEE-EC
Confidence 6999999999999999988877633 54444 44
No 263
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=87.46 E-value=0.51 Score=41.08 Aligned_cols=30 Identities=27% Similarity=0.354 Sum_probs=25.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+||+|+|+|.+|+.+++.|.+.. +++..++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g-~~V~~~~ 60 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMG-HTVTVWN 60 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHHhCC-CEEEEEe
Confidence 78999999999999999998775 6766664
No 264
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=87.41 E-value=0.31 Score=43.38 Aligned_cols=30 Identities=33% Similarity=0.540 Sum_probs=23.8
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCc-eEEEe
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAV 36 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~-~vvai 36 (250)
|||+|.|.|.||..++..+..++-+ +++-+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~ 31 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMV 31 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 4899999999999999988877633 55444
No 265
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=87.40 E-value=0.44 Score=42.37 Aligned_cols=32 Identities=31% Similarity=0.394 Sum_probs=25.8
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
+||+|+|.|.+|..+...+...+-++ +.+-|.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di 36 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDI 36 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeC
Confidence 59999999999999999988876347 455554
No 266
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=87.40 E-value=0.46 Score=42.35 Aligned_cols=33 Identities=21% Similarity=0.168 Sum_probs=26.7
Q ss_pred Cce-eEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 5 KKI-KIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 5 m~~-kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|+| ||+|+|.|.+|..+...|.+.. .+|..++.
T Consensus 13 m~M~kI~iIG~G~mG~~la~~L~~~G-~~V~~~~r 46 (366)
T 1evy_A 13 LYLNKAVVFGSGAFGTALAMVLSKKC-REVCVWHM 46 (366)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTTE-EEEEEECS
T ss_pred hccCeEEEECCCHHHHHHHHHHHhCC-CEEEEEEC
Confidence 445 9999999999999999988765 67766653
No 267
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=87.32 E-value=0.58 Score=40.77 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=26.8
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|+|+|+|+||+.+++.+.... ++|++.+.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d~ 188 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALG-ANVKVGAR 188 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEcccHHHHHHHHHHHHCC-CEEEEEEC
Confidence 58999999999999999998776 78777764
No 268
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=87.28 E-value=0.53 Score=39.73 Aligned_cols=29 Identities=31% Similarity=0.612 Sum_probs=24.9
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEe
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvai 36 (250)
|||+|+|+|.+|+.+.+.|.+.. ++|+..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g-~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRG-VEVVTS 29 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEC
T ss_pred CeEEEEechHHHHHHHHHHHHCC-CeEEEe
Confidence 48999999999999999998876 777664
No 269
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=87.25 E-value=0.44 Score=42.48 Aligned_cols=29 Identities=34% Similarity=0.545 Sum_probs=24.3
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCc-eEEEe
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAV 36 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~-~vvai 36 (250)
+||+|.|.|.+|..++..+..++ + +++-+
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~-~~~v~l~ 35 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQ-LGDVVLF 35 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CceEEEE
Confidence 69999999999999999888776 4 65555
No 270
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=87.05 E-value=2.3 Score=35.97 Aligned_cols=30 Identities=20% Similarity=0.166 Sum_probs=24.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|-|+|.|.+|..-++.|.+.+ -+|+.|+
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G-A~VtVva 61 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG-AAITVVA 61 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC-CCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998875 4555454
No 271
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=87.05 E-value=0.32 Score=42.27 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=24.1
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
|+|||+|+|.|.+|..+...|.+.. .+|..+.
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~g-~~V~~~~ 32 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQSL-PHTTLIG 32 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHHC-TTCEEEE
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCC-CeEEEEE
Confidence 6789999999999999998888654 4544454
No 272
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=86.97 E-value=1.3 Score=39.10 Aligned_cols=32 Identities=22% Similarity=0.385 Sum_probs=26.7
Q ss_pred eeEEEEc-CChHHHHHHHHHHcC-CCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQR-DDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~-~~~~vvaind 38 (250)
++|-|-| +|.||+.+++.|.++ +..+|+++..
T Consensus 22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r 55 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR 55 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 6899999 999999999999887 5338777764
No 273
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=86.91 E-value=0.23 Score=49.08 Aligned_cols=30 Identities=13% Similarity=0.228 Sum_probs=26.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.||||+|.|.+|..++..+.+.. ++|+..+
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG-~~V~l~D 344 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKG-TPILMKD 344 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CEEEEECCChhhHHHHHHHHhCC-CEEEEEE
Confidence 58999999999999999998876 7877664
No 274
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.88 E-value=0.6 Score=42.18 Aligned_cols=40 Identities=23% Similarity=0.336 Sum_probs=31.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
+||||+|+|.+|+.+.+.|.+.. ++|+..+. +++....+.
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G-~~V~v~dr---~~~~~~~l~ 62 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGG-HECVVYDL---NVNAVQALE 62 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS---CHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHhCC-CEEEEEeC---CHHHHHHHH
Confidence 79999999999999999999887 88777753 355444443
No 275
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=86.86 E-value=0.47 Score=41.64 Aligned_cols=30 Identities=27% Similarity=0.470 Sum_probs=25.6
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCc-eEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~-~vvain 37 (250)
+||+|+|+|.+|..+.+.|.+.. + +|+..+
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G-~~~V~~~d 55 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAG-AIDMAAYD 55 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS-CCEEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHCC-CCeEEEEc
Confidence 69999999999999999998876 6 666554
No 276
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=86.86 E-value=0.67 Score=38.20 Aligned_cols=30 Identities=20% Similarity=0.231 Sum_probs=24.5
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEe
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvai 36 (250)
.+||+|+|+|.+|..+.+.|.+.. .++..+
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g-~~V~~~ 48 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG-HEVTYY 48 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 368999999999999999998775 665544
No 277
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=86.76 E-value=0.63 Score=40.90 Aligned_cols=30 Identities=17% Similarity=0.211 Sum_probs=25.8
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
|||+|+|.|.+|..+...|.+.. .+|+.++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g-~~V~~~~ 34 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKG-QSVLAWD 34 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 69999999999999999988776 7876664
No 278
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=86.68 E-value=1.9 Score=39.97 Aligned_cols=32 Identities=25% Similarity=0.570 Sum_probs=29.3
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.||+|-|||.||+.+++.|.+.. ..+|+|.|.
T Consensus 222 ~~vaVqG~GnVG~~aa~~l~e~G-akVVavsD~ 253 (424)
T 3k92_A 222 ARIIIQGFGNAGSFLAKFMHDAG-AKVIGISDA 253 (424)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 68999999999999999998876 899999997
No 279
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=86.65 E-value=0.71 Score=40.66 Aligned_cols=34 Identities=24% Similarity=0.262 Sum_probs=26.7
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|++||+|.|.|.+|..++..+...+.++ +.+-|.
T Consensus 1 M~~kI~VIGaG~vG~~~a~~la~~g~~~-v~L~Di 34 (309)
T 1ur5_A 1 MRKKISIIGAGFVGSTTAHWLAAKELGD-IVLLDI 34 (309)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCe-EEEEeC
Confidence 5679999999999999999888776457 555554
No 280
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=86.61 E-value=0.51 Score=40.50 Aligned_cols=30 Identities=20% Similarity=0.517 Sum_probs=25.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
|||+|+|+|.+|+.+.+.|.+.. +++...+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g-~~V~~~~ 30 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHG-YPLIIYD 30 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTT-CCEEEEC
T ss_pred CeEEEEeccHHHHHHHHHHHHCC-CEEEEEe
Confidence 37999999999999999998776 6776664
No 281
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=86.61 E-value=0.76 Score=42.34 Aligned_cols=39 Identities=28% Similarity=0.649 Sum_probs=31.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhh
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYM 49 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~l 49 (250)
++|.|.|+|++|+.+++.|.++. +++++|.. +++.+..+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g-~~vvvId~---d~~~v~~~ 43 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSG-VKMVVLDH---DPDHIETL 43 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCEEEEEC---CHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC-CCEEEEEC---CHHHHHHH
Confidence 47999999999999999999886 88888863 46654443
No 282
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=86.51 E-value=0.56 Score=43.87 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=27.0
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
++||||+|+|.+|+.+++.|.++. ++|...+.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G-~~V~v~dr 36 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRG-YTVAIYNR 36 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTT-CCEEEECS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCC-CEEEEEcC
Confidence 369999999999999999998876 78766653
No 283
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=86.48 E-value=0.64 Score=39.65 Aligned_cols=34 Identities=32% Similarity=0.397 Sum_probs=28.6
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|++||.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 40 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASG-EEVTVLDDL 40 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CCEEEECCC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCC-CEEEEEecC
Confidence 357999999 9999999999999886 788887654
No 284
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=86.43 E-value=6.6 Score=37.16 Aligned_cols=32 Identities=19% Similarity=0.347 Sum_probs=28.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.+|+|-|||.||+..++.|.+.. -.+|+|.|.
T Consensus 245 ~tVaVQG~GNVG~~aa~~L~e~G-akVVavsDs 276 (501)
T 3mw9_A 245 KTFVVQGFGNVGLHSMRYLHRFG-AKCITVGES 276 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 58999999999999999998876 899999874
No 285
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=86.41 E-value=0.74 Score=37.47 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=26.7
Q ss_pred ee-EEEEc-CChHHHHHHHHHH-cCCCceEEEeeCC
Q 025639 7 IK-IGING-FGRIGRLVARVAL-QRDDVELVAVNDP 39 (250)
Q Consensus 7 ~k-VaI~G-~G~IGr~~lr~l~-~~~~~~vvaind~ 39 (250)
+| |.|.| +|.||+.+++.|. ++. .+|+++...
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g-~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTD-MHITLYGRQ 39 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCC-CEEEEEESS
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCC-ceEEEEecC
Confidence 45 99999 9999999999998 665 788877643
No 286
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=86.35 E-value=0.65 Score=44.15 Aligned_cols=31 Identities=35% Similarity=0.538 Sum_probs=26.9
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|||+|+|+||+.+++.|.... ++|++.+.
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G-~~V~~~d~ 173 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFG-AYVVAYDP 173 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEECT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEECC
Confidence 58999999999999999998775 88887753
No 287
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=86.26 E-value=0.75 Score=39.40 Aligned_cols=32 Identities=22% Similarity=0.307 Sum_probs=27.3
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCCceEEEee
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvain 37 (250)
|.+||.|.| +|.||+.+++.|.+++ .+|+++.
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCG 33 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEc
Confidence 456899999 9999999999999886 7887775
No 288
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=86.09 E-value=2.2 Score=37.47 Aligned_cols=134 Identities=15% Similarity=0.132 Sum_probs=67.2
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCCC
Q 025639 8 KIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNP 87 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~p 87 (250)
+|.|+|.|.||...++++......+++++... .+.+..+.++ | . + -.++. .+ +.
T Consensus 174 ~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~---~~~~~~~~~l----G----a------~--~~i~~------~~-~~ 227 (345)
T 3jv7_A 174 TAVVIGVGGLGHVGIQILRAVSAARVIAVDLD---DDRLALAREV----G----A------D--AAVKS------GA-GA 227 (345)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCCEEEEEESC---HHHHHHHHHT----T----C------S--EEEEC------ST-TH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC---HHHHHHHHHc----C----C------C--EEEcC------CC-cH
Confidence 69999999999999998876633677777533 4444444322 2 0 0 01100 00 00
Q ss_pred -CCC-Cc-ccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEecCChhhhhHHH
Q 025639 88 -EEI-PW-AKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAP 164 (250)
Q Consensus 88 -~~i-~w-~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~s~d~p~iV~gVN~~~~~~~~~IIs~~sCtT~~la~ 164 (250)
+.+ .+ +..++|+||||+|.....+.+-..++.|- ++++-+.....+.- ++...+..+..+...-.-+...+.-
T Consensus 228 ~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G-~iv~~G~~~~~~~~---~~~~~~~~~~~i~g~~~~~~~~~~~ 303 (345)
T 3jv7_A 228 ADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDG-HISVVGIHAGAHAK---VGFFMIPFGASVVTPYWGTRSELME 303 (345)
T ss_dssp HHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEE-EEEECSCCTTCCEE---ESTTTSCTTCEEECCCSCCHHHHHH
T ss_pred HHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCC-EEEEECCCCCCCCC---cCHHHHhCCCEEEEEecCCHHHHHH
Confidence 000 00 11279999999997545555556666554 34443332221222 2322232233444333333344555
Q ss_pred HHHHHHh
Q 025639 165 LAKVIHD 171 (250)
Q Consensus 165 ~l~~L~~ 171 (250)
+++.+.+
T Consensus 304 ~~~l~~~ 310 (345)
T 3jv7_A 304 VVALARA 310 (345)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 5555543
No 289
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=85.94 E-value=0.53 Score=39.62 Aligned_cols=23 Identities=30% Similarity=0.603 Sum_probs=20.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRD 29 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~ 29 (250)
|||+|+|.|.+|+.+.+.|.+..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g 27 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANAN 27 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHT
T ss_pred CEEEEECcCHHHHHHHHHHHHCC
Confidence 69999999999999999887654
No 290
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=85.89 E-value=0.71 Score=41.75 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=26.0
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
|+|||+|+|.|.+|..+...|..+...+|..+.
T Consensus 1 ~~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 1 MTVKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 557999999999999999988764237777665
No 291
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=85.88 E-value=0.77 Score=38.92 Aligned_cols=31 Identities=23% Similarity=0.307 Sum_probs=26.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|||+|+|.|.+|..+...|.+.. .+|..++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG-HEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCC-CCEEEEEc
Confidence 48999999999999999998876 67777654
No 292
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=85.77 E-value=0.8 Score=40.44 Aligned_cols=43 Identities=16% Similarity=0.247 Sum_probs=34.4
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
|||.|.| +|.||+.+++.|.+++.++++.+.-. .+++.+..++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-~d~~~l~~~~ 44 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-TKEEELESAL 44 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-CCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-CCHHHHHHHh
Confidence 4899999 99999999999998875588877642 4677666666
No 293
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=85.73 E-value=0.65 Score=43.63 Aligned_cols=42 Identities=21% Similarity=0.267 Sum_probs=31.2
Q ss_pred CC-ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhh
Q 025639 4 DK-KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYM 49 (250)
Q Consensus 4 ~m-~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~l 49 (250)
|| ++||||+|+|.+|+.+++.|.+.. ++|+..|.. ++....+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G-~~V~v~~r~---~~~~~~l 54 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRG-YTVSIFNRS---REKTEEV 54 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTT-CCEEEECSS---HHHHHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCC-CeEEEEeCC---HHHHHHH
Confidence 36 479999999999999999999876 787777643 4444443
No 294
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.69 E-value=0.79 Score=42.79 Aligned_cols=40 Identities=23% Similarity=0.366 Sum_probs=31.6
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhh
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYM 49 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~l 49 (250)
.|||-|.|+|++|+.+++.|.+.. .+++.|.. +++.+..+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~-~~v~vId~---d~~~~~~~ 42 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGEN-NDITIVDK---DGDRLREL 42 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTT-EEEEEEES---CHHHHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC-CCEEEEEC---CHHHHHHH
Confidence 379999999999999999998765 78888854 46655444
No 295
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=85.58 E-value=2.7 Score=37.93 Aligned_cols=29 Identities=17% Similarity=0.242 Sum_probs=24.6
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCc-eEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~-~vvain 37 (250)
+|.|+|.|.||...++++.... . +++++.
T Consensus 216 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 245 (404)
T 3ip1_A 216 NVVILGGGPIGLAAVAILKHAG-ASKVILSE 245 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 6999999999999999888776 5 777764
No 296
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=85.56 E-value=1.2 Score=33.83 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=29.5
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.++.|+|.|..|+.+++.+..++.++++++-|.
T Consensus 5 ~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~ 37 (141)
T 3nkl_A 5 KKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD 37 (141)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 589999999999999999987767999998775
No 297
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=85.49 E-value=0.57 Score=42.00 Aligned_cols=29 Identities=24% Similarity=0.321 Sum_probs=24.1
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCc-eEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~-~vvain 37 (250)
+|.|+|.|.||...++++.... . .++++.
T Consensus 185 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 214 (370)
T 4ej6_A 185 TVAILGGGVIGLLTVQLARLAG-ATTVILST 214 (370)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 7999999999999999888776 5 666663
No 298
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=85.20 E-value=0.7 Score=43.32 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=31.6
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCC-CceEEEeeCCCCChhHHhhh
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRD-DVELVAVNDPFISTDYMTYM 49 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~-~~~vvaind~~~~~~~~a~l 49 (250)
|+|||+|+|.|.+|..+...|.+.. .++|++++- +++.+..+
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~---~~~~v~~l 50 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDM---NTAKIAEW 50 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECS---CHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEEC---CHHHHHHH
Confidence 4579999999999999999888762 488888752 45544444
No 299
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=84.80 E-value=0.84 Score=38.65 Aligned_cols=32 Identities=28% Similarity=0.346 Sum_probs=27.9
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
+||.|.|.|.||+.+++.|.+++ .+|+++...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r~ 35 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQG-HEVTGLRRS 35 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCEEEEECT
T ss_pred CcEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 58999999999999999999886 788888654
No 300
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=85.02 E-value=0.18 Score=41.67 Aligned_cols=32 Identities=25% Similarity=0.224 Sum_probs=25.2
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
|.+||+|+|+|.+|+.+++.|.+.. .++..++
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G-~~V~~~~ 49 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCG-YSVVFGS 49 (201)
Confidence 4478999999999999999887765 5654443
No 301
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=84.60 E-value=0.82 Score=40.23 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=28.9
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 6 KIKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++||.|.| +|.||+.+++.|.+++..+|+++...
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCC
Confidence 46999999 99999999999998744888888754
No 302
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=84.49 E-value=1.8 Score=40.16 Aligned_cols=31 Identities=13% Similarity=0.133 Sum_probs=25.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|.|.|+|.+|+.+++.|.+.+ .+++.++.
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G-~~V~v~~R 34 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSG-IKVTVACR 34 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCc-CEEEEEEC
Confidence 48999999999999999999765 77665543
No 303
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=84.40 E-value=1.2 Score=39.85 Aligned_cols=30 Identities=23% Similarity=0.502 Sum_probs=25.5
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 8 KIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+|.|.|.|.||...++++.... ..++++..
T Consensus 190 ~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~ 219 (366)
T 1yqd_A 190 HIGIVGLGGLGHVAVKFAKAFG-SKVTVIST 219 (366)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 7999999999999999988776 68777754
No 304
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=84.00 E-value=0.99 Score=42.77 Aligned_cols=30 Identities=13% Similarity=0.192 Sum_probs=26.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|+|+|+|+||+.+++.+.... ++|++.+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G-~~V~v~d 307 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLG-ATVWVTE 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEe
Confidence 58999999999999999998776 8877765
No 305
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=83.94 E-value=0.88 Score=40.47 Aligned_cols=31 Identities=23% Similarity=0.249 Sum_probs=26.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+||+|+|+|.+|+.+++.|.... ++++..+.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G-~~V~~~~~ 47 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG-VDVTVGLR 47 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEECC
T ss_pred CEEEEECchHHHHHHHHHHHHCc-CEEEEEEC
Confidence 58999999999999999998876 77765543
No 306
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=83.92 E-value=1 Score=39.12 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=28.3
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|.++|-|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAG-YLPVVIDN 34 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEec
Confidence 567899999 9999999999999876 78877754
No 307
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=83.78 E-value=2.5 Score=37.55 Aligned_cols=30 Identities=13% Similarity=0.334 Sum_probs=25.6
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 8 KIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+|.|.|.|.||...++++.... .+++++..
T Consensus 192 ~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~ 221 (363)
T 3uog_A 192 RVVVQGTGGVALFGLQIAKATG-AEVIVTSS 221 (363)
T ss_dssp EEEEESSBHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CEEEEEec
Confidence 7999999999999999888776 68877753
No 308
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=83.67 E-value=0.94 Score=39.01 Aligned_cols=33 Identities=24% Similarity=0.386 Sum_probs=25.9
Q ss_pred CceeEEEEcCChHHHHHHHHHHcC-----CCceEEEee
Q 025639 5 KKIKIGINGFGRIGRLVARVALQR-----DDVELVAVN 37 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~-----~~~~vvain 37 (250)
|+|||+|+|.|.+|..+...|.+. +..+|..++
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEE
Confidence 447999999999999999988765 215666664
No 309
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=83.64 E-value=0.68 Score=35.48 Aligned_cols=31 Identities=23% Similarity=0.143 Sum_probs=25.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.||+|+|+|.+|+.+++.|...+ ++ +.+.+.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g-~~-v~v~~r 52 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQ-YK-VTVAGR 52 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTT-CE-EEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CE-EEEEcC
Confidence 58999999999999999888765 78 445444
No 310
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=83.39 E-value=0.99 Score=39.00 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=25.3
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCc---eEEEee
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDV---ELVAVN 37 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~---~vvain 37 (250)
++||+|+|.|.+|+.+++.|.+.. + +|...+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g-~~~~~V~v~d 36 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANG-YDPNRICVTN 36 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTT-CCGGGEEEEC
T ss_pred CCEEEEEcccHHHHHHHHHHHHCC-CCCCeEEEEe
Confidence 368999999999999999998875 4 655553
No 311
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=82.87 E-value=0.78 Score=39.09 Aligned_cols=34 Identities=24% Similarity=0.239 Sum_probs=27.9
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcC-CCceEEEeeC
Q 025639 5 KKIKIGING-FGRIGRLVARVALQR-DDVELVAVND 38 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~-~~~~vvaind 38 (250)
|.+||.|.| +|.||+.+++.|.++ +..+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 36 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDI 36 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEES
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 557899999 999999999999887 2378777754
No 312
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=82.85 E-value=1.1 Score=39.62 Aligned_cols=30 Identities=17% Similarity=0.228 Sum_probs=25.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+||+|+|.|.+|..+...|.+.. .+|..+.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g-~~V~~~~ 33 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAG-EAINVLA 33 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEE
Confidence 69999999999999999998775 5766664
No 313
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=82.82 E-value=1 Score=37.82 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=23.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
|||+|+|.|.+|+.+.+.|.+....++..++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~ 31 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIAN 31 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEEC
Confidence 4899999999999999988765424554443
No 314
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=82.63 E-value=13 Score=32.13 Aligned_cols=32 Identities=16% Similarity=0.156 Sum_probs=28.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.|+.|+|.|-.||.++..|.+.. .+|..+|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt 150 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG-LQVSVLNRS 150 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 47999999999999999999887 788777765
No 315
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=82.41 E-value=1.4 Score=38.31 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=28.6
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 6 KIKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.+||.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 58 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDNF 58 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 36899999 9999999999999887 788888653
No 316
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=82.40 E-value=1.7 Score=38.23 Aligned_cols=29 Identities=24% Similarity=0.320 Sum_probs=24.6
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCc-eEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~-~vvain 37 (250)
+|.|+|.|.||+..++++.... . +++++.
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~ 199 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKASG-AYPVIVSE 199 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 6999999999999999888776 6 777764
No 317
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=82.31 E-value=1.7 Score=38.17 Aligned_cols=29 Identities=24% Similarity=0.367 Sum_probs=24.6
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCc-eEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~-~vvain 37 (250)
+|.|.|.|.||...++++.... . +++++.
T Consensus 167 ~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~ 196 (343)
T 2dq4_A 167 SVLITGAGPIGLMAAMVVRASG-AGPILVSD 196 (343)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 6999999999999999888776 6 777765
No 318
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=82.06 E-value=1.4 Score=37.84 Aligned_cols=31 Identities=26% Similarity=0.378 Sum_probs=27.2
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG-LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 5899999 9999999999999886 78887754
No 319
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=82.03 E-value=1.1 Score=38.99 Aligned_cols=31 Identities=16% Similarity=0.239 Sum_probs=26.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|||+|+|.|.+|..+.+.|.+.. .++..++.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g-~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG-NEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC-CEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CeEEEEEc
Confidence 48999999999999999988765 67777754
No 320
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=81.97 E-value=1.8 Score=37.99 Aligned_cols=30 Identities=40% Similarity=0.577 Sum_probs=23.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCc-eEEEe
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAV 36 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~-~vvai 36 (250)
|||+|.|.|.+|..++..|..++-+ +++-+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~ 31 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALV 31 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEE
Confidence 4899999999999999888876533 55444
No 321
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=81.96 E-value=1 Score=42.56 Aligned_cols=30 Identities=17% Similarity=0.228 Sum_probs=26.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|+|+|+|+||+.+++.+.... ++|++.+
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G-~~Viv~d 287 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLG-ARVYITE 287 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCc-CEEEEEe
Confidence 58999999999999999988765 8877765
No 322
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=81.89 E-value=1.1 Score=40.26 Aligned_cols=30 Identities=27% Similarity=0.530 Sum_probs=25.0
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 8 KIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+|.|+|.|.||...++++.... .+++++..
T Consensus 197 ~VlV~GaG~vG~~aiqlak~~G-a~Vi~~~~ 226 (369)
T 1uuf_A 197 KVGVVGIGGLGHMGIKLAHAMG-AHVVAFTT 226 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 7999999999999999888776 67777653
No 323
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.84 E-value=1.1 Score=41.93 Aligned_cols=31 Identities=19% Similarity=0.447 Sum_probs=26.5
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|||||+|+|.+|+.+.+.|.++. ++|...+.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G-~~V~v~dr 32 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG-FKVAVFNR 32 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CEEEEEeC
Confidence 58999999999999999998876 78766653
No 324
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=81.79 E-value=2.7 Score=37.49 Aligned_cols=24 Identities=17% Similarity=0.199 Sum_probs=20.5
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCC
Q 025639 6 KIKIGING-FGRIGRLVARVALQRD 29 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~ 29 (250)
++||+|.| .|.||..++..|..++
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~ 27 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGS 27 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCC
Confidence 37999999 9999999998887653
No 325
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=81.70 E-value=1.2 Score=40.95 Aligned_cols=39 Identities=26% Similarity=0.470 Sum_probs=30.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhh
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYM 49 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~l 49 (250)
|||+|+|+|.+|..+...|.+.. .+|++++ . +++.+..+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G-~~V~~~d-~--~~~~~~~l 39 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG-HEVIGVD-V--SSTKIDLI 39 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEEC-S--CHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEE-C--CHHHHHHH
Confidence 48999999999999999998876 7877774 2 45544443
No 326
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=81.69 E-value=3.5 Score=36.99 Aligned_cols=98 Identities=18% Similarity=0.272 Sum_probs=57.7
Q ss_pred ceeEEEEc-CChHHHHHHHH--HHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCE--EEE
Q 025639 6 KIKIGING-FGRIGRLVARV--ALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEK--PVA 80 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~--l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~--~i~ 80 (250)
.+||-|.| +|+.++++++. +.++++.++|+.-++... + || +.+.++.+ -++
T Consensus 10 ~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~----------g--~~------------~~v~~G~~~~Gvp 65 (334)
T 3mwd_B 10 HTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTG----------D--HK------------QKFYWGHKEILIP 65 (334)
T ss_dssp TCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSC----------S--EE------------EEEEETTEEEEEE
T ss_pred CCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCC----------C--cc------------ceEeccCccCCce
Confidence 47999999 89999988887 456777999998877110 0 00 01222222 245
Q ss_pred EEecCCCCCCCcccC-CccEEEeecCCCCCHHHHHHHHH-CCCCEEEE-eCCC
Q 025639 81 VFGFRNPEEIPWAKT-GAEYVVESTGVFTDKDKAAAHLK-GGAKKVVI-SAPS 130 (250)
Q Consensus 81 v~~~~~p~~i~w~~~-~vdiV~~~tg~~~~~~~a~~~~~-~Gak~vvi-s~~s 130 (250)
++. +.++++= +. ++|+++.+++.....+.....+. +|.|.+|+ |...
T Consensus 66 vy~--sv~ea~~-~~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~ 115 (334)
T 3mwd_B 66 VFK--NMADAMR-KHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGI 115 (334)
T ss_dssp EES--SHHHHHH-HCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCC
T ss_pred eeC--CHHHHhh-cCCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 553 2222210 11 57888888876544444445555 78876666 6543
No 327
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=81.62 E-value=1.4 Score=41.19 Aligned_cols=30 Identities=17% Similarity=0.264 Sum_probs=25.5
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|+|+|+|.||+.+++.|.... ++|++.+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~G-a~Viv~D 241 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFG-ARVVVTE 241 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998876 7866553
No 328
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=81.51 E-value=1.5 Score=34.58 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=27.6
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|+..|+|+|-|..|-..+..|.++. ++++-+..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G-~~V~v~Ek 33 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAG-HQVHLFDK 33 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT-CCEEEECS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEEC
Confidence 6677999999999999999999886 78777764
No 329
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=81.51 E-value=2.4 Score=37.91 Aligned_cols=32 Identities=38% Similarity=0.430 Sum_probs=24.5
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCc-eEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~-~vvaind~ 39 (250)
+||+|+|.|.||..++..+..++.. +++-+ |.
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~-Di 52 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMKDLADELALV-DV 52 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCCSEEEEE-CS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEE-eC
Confidence 6999999999999988888877632 54444 44
No 330
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=81.18 E-value=1.2 Score=41.62 Aligned_cols=31 Identities=16% Similarity=0.210 Sum_probs=26.6
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+||||+|+|.+|+.+.+.|.++. ++|...+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G-~~V~v~dr 33 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG-FVVCAFNR 33 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEECS
T ss_pred CeEEEEChHHHHHHHHHHHHHCC-CeEEEEeC
Confidence 58999999999999999998876 78766653
No 331
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=81.10 E-value=1.5 Score=41.27 Aligned_cols=30 Identities=13% Similarity=0.213 Sum_probs=25.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|+|+|+|+||+.+++.+.... ++|++.+
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafG-a~Viv~d 277 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAG-ARVKVTE 277 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEe
Confidence 47999999999999999998776 7766553
No 332
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=81.05 E-value=0.73 Score=38.66 Aligned_cols=33 Identities=12% Similarity=0.060 Sum_probs=27.8
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|+.+|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSDI 34 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTE-EEEEECCS
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 556899999 9999999999998876 78777654
No 333
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=81.03 E-value=1.1 Score=41.71 Aligned_cols=39 Identities=18% Similarity=0.205 Sum_probs=29.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCC-CceEEEeeCCCCChhHHhh
Q 025639 7 IKIGINGFGRIGRLVARVALQRD-DVELVAVNDPFISTDYMTY 48 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~-~~~vvaind~~~~~~~~a~ 48 (250)
|||+|+|+|.+|..+...|.+.. .++|++++- +++.+..
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~---~~~~~~~ 45 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDV---NESRINA 45 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECS---CHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEEC---CHHHHHH
Confidence 69999999999999999988762 378877753 4554433
No 334
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=80.93 E-value=1.3 Score=41.85 Aligned_cols=40 Identities=13% Similarity=0.183 Sum_probs=31.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
+||||+|+|.+|+.+++.|.++. ++|++.+. +++....+.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G-~~V~v~dr---~~~~~~~l~ 44 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHG-FVVCAFNR---TVSKVDDFL 44 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEECS---STHHHHHHH
T ss_pred CEEEEEChhHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHH
Confidence 69999999999999999999886 78877754 344444443
No 335
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=80.61 E-value=2 Score=38.28 Aligned_cols=46 Identities=22% Similarity=0.142 Sum_probs=30.3
Q ss_pred CCCCCceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 1 ~~~~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
|+.+..-||||+|.|.+|+.++..+.... ++|+.. |+ +++.+...+
T Consensus 1 Ma~p~~~~VaViGaG~MG~giA~~~a~~G-~~V~l~-D~--~~~~l~~~~ 46 (319)
T 3ado_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASGG-FRVKLY-DI--EPRQITGAL 46 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS--CHHHHHHHH
T ss_pred CCCCCCCeEEEECCcHHHHHHHHHHHhCC-CeEEEE-EC--CHHHHHHHH
Confidence 55565568999999999999999888886 786544 54 565544433
No 336
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=80.52 E-value=1.2 Score=39.32 Aligned_cols=28 Identities=29% Similarity=0.472 Sum_probs=21.3
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCc-eEEEe
Q 025639 8 KIGINGFGRIGRLVARVALQRDDV-ELVAV 36 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~-~vvai 36 (250)
||+|.|.|.+|..++..+..++ + ||+-+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~-l~el~L~ 29 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRG-YDDLLLI 29 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHT-CSCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHhCC-CCEEEEE
Confidence 7999999999998888777654 4 34443
No 337
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=80.51 E-value=2.9 Score=41.55 Aligned_cols=103 Identities=18% Similarity=0.243 Sum_probs=57.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhcc-----cc--ccccCCCcceEEeCCeeeEECCEEE
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKY-----DS--VHGQWKHNELKVKDEKTLLFGEKPV 79 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~y-----dS--~~G~~~~~~v~~~~~~~l~~~g~~i 79 (250)
-||||+|.|.+|..++..+.... ++|+-. |. +++.+....++ +. ..++.. . . . .. ...+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG-~~V~l~-D~--~~~~l~~~~~~i~~~l~~~~~~~~~~-~----~-~-~~---~~~~ 382 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVG-ISVVAV-ES--DPKQLDAAKKIITFTLEKEASRAHQN-G----Q-A-SA---KPKL 382 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEE-CS--SHHHHHHHHHHHHHHHHHHHHHHHTT-T----C-C-CC---CCCE
T ss_pred cEEEEEcccHHHHHHHHHHHhCC-Cchhcc-cc--hHhhhhhHHHHHHHHHHHHHHhcccc-c----h-h-hh---hhhh
Confidence 48999999999999999888876 887655 43 45443333221 11 011111 0 0 0 00 0122
Q ss_pred EEEecCCCCCCCcccCCccEEEeecCCCCCHH-----HHHHHHHCCCCEEEEeCCCC
Q 025639 80 AVFGFRNPEEIPWAKTGAEYVVESTGVFTDKD-----KAAAHLKGGAKKVVISAPSK 131 (250)
Q Consensus 80 ~v~~~~~p~~i~w~~~~vdiV~~~tg~~~~~~-----~a~~~~~~Gak~vvis~~s~ 131 (250)
... .+.+.+. ++|+|+||.-.-.... ..+.+.+.+| ++-||.|.
T Consensus 383 ~~~--~~~~~l~----~aDlVIEAV~E~l~iK~~vf~~le~~~~~~a--IlASNTSs 431 (742)
T 3zwc_A 383 RFS--SSTKELS----TVDLVVEAVFEDMNLKKKVFAELSALCKPGA--FLCTNTSA 431 (742)
T ss_dssp EEE--SCGGGGG----SCSEEEECCCSCHHHHHHHHHHHHHHSCTTC--EEEECCSS
T ss_pred ccc--CcHHHHh----hCCEEEEeccccHHHHHHHHHHHhhcCCCCc--eEEecCCc
Confidence 232 2344442 7999999975433322 2234555666 77788874
No 338
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=80.45 E-value=1.7 Score=39.40 Aligned_cols=31 Identities=26% Similarity=0.542 Sum_probs=27.6
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.+|+|.|+|.||+.+++.|.+.. ..|+ +.|+
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~G-akVv-vsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAG-AQLL-VADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 48999999999999999999886 8888 7776
No 339
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=80.40 E-value=2.1 Score=37.91 Aligned_cols=32 Identities=28% Similarity=0.280 Sum_probs=27.7
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++|.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 62 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLKHEG-HYVIASDWK 62 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CeEEEECCccHHHHHHHHHHHHCC-CeEEEEECC
Confidence 6899999 9999999999999886 788877643
No 340
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=80.21 E-value=1.7 Score=37.29 Aligned_cols=39 Identities=18% Similarity=0.222 Sum_probs=30.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhh
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYM 49 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~l 49 (250)
.||+|+|.|.+|+.+++.+.... ++|+..+ . +++.+..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G-~~V~l~d-~--~~~~~~~~ 43 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHG-FAVTAYD-I--NTDALDAA 43 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC-S--SHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEe-C--CHHHHHHH
Confidence 58999999999999999999886 7876664 3 45544443
No 341
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=80.21 E-value=1.5 Score=37.35 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=27.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++|.|.| +|.||+.+++.|.+++..+|+++...
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~ 39 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRN 39 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESC
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcC
Confidence 6899999 99999999999987654788887654
No 342
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=80.19 E-value=1.5 Score=38.54 Aligned_cols=32 Identities=16% Similarity=0.245 Sum_probs=25.6
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCC---ceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDD---VELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~---~~vvaind 38 (250)
|||+|+|.|.+|..+.+.|.+... .+|...+.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 689999999999999999887642 56665543
No 343
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=80.12 E-value=1.7 Score=37.44 Aligned_cols=31 Identities=29% Similarity=0.544 Sum_probs=27.0
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG-IDLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC-CEEEEEeC
Confidence 5899999 9999999999999876 78888753
No 344
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=79.76 E-value=2.1 Score=38.00 Aligned_cols=35 Identities=34% Similarity=0.311 Sum_probs=27.0
Q ss_pred CCceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 4 ~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
+|++||+|+|.|.+|..++.++...+-++ |.+-|.
T Consensus 12 ~~~~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~Di 46 (328)
T 2hjr_A 12 IMRKKISIIGAGQIGSTIALLLGQKDLGD-VYMFDI 46 (328)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 46679999999999999999888876337 445454
No 345
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=79.44 E-value=1.8 Score=36.96 Aligned_cols=30 Identities=23% Similarity=0.275 Sum_probs=25.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+||.|.| +|.||+.+++.|.+++ .+++++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~g-~~v~~~~ 34 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQRG-DVELVLR 34 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCT-TEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-CeEEEEe
Confidence 6899999 9999999999999876 6766654
No 346
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=79.35 E-value=1.9 Score=37.96 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=27.9
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|+.+|.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~r~ 61 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGKG-YEVHGLIRR 61 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC
Confidence 435899999 9999999999999886 788877643
No 347
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=79.31 E-value=1.8 Score=40.18 Aligned_cols=39 Identities=26% Similarity=0.311 Sum_probs=30.3
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
|||+|+|+|.+|..++..|.+ . ++|++++- +++.+..+-
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G-~~V~~~D~---~~~~v~~l~ 75 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-N-HEVVALDI---VQAKVDMLN 75 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-T-SEEEEECS---CHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-C-CeEEEEec---CHHHhhHHh
Confidence 699999999999999998876 4 89887753 465554443
No 348
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=79.19 E-value=1.6 Score=38.98 Aligned_cols=91 Identities=15% Similarity=0.238 Sum_probs=51.3
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
-+|.|+| .|.||...++++......+++++.. +++.+.++.++ | .+ ..++.+. .+.+
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~l----G----ad--------~vi~~~~-~~~~-- 230 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKSL----G----AH--------HVIDHSK-PLAA-- 230 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHHT----T----CS--------EEECTTS-CHHH--
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHHc----C----CC--------EEEeCCC-CHHH--
Confidence 3699999 9999999999887522378877753 34444444322 2 10 1111100 0000
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCC
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGA 121 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Ga 121 (250)
...++ ...++|+||||+|.....+.+-.+++.|-
T Consensus 231 ~v~~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G 264 (363)
T 4dvj_A 231 EVAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQG 264 (363)
T ss_dssp HHHTT--CSCCEEEEEECSCHHHHHHHHHHHSCTTC
T ss_pred HHHHh--cCCCceEEEECCCchhhHHHHHHHhcCCC
Confidence 01111 22479999999996544455556666665
No 349
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=78.93 E-value=7.2 Score=34.21 Aligned_cols=29 Identities=21% Similarity=0.189 Sum_probs=24.2
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+|.|.|.|.||...++++.... ..|+++.
T Consensus 171 ~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~ 199 (352)
T 1e3j_A 171 TVLVIGAGPIGLVSVLAAKAYG-AFVVCTA 199 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CEEEEEc
Confidence 7999999999999999888776 6666664
No 350
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=78.90 E-value=1.9 Score=40.44 Aligned_cols=41 Identities=10% Similarity=0.211 Sum_probs=31.8
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
+|||+|+|.|.+|..+...|.+.. ++|+.++- +++.+..+-
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G-~~V~~~d~---~~~~v~~l~ 48 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG-HDVFCLDV---DQAKIDILN 48 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS---CHHHHHHHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCC-CEEEEEEC---CHHHHHHHH
Confidence 479999999999999999998876 78877752 455554443
No 351
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=78.86 E-value=2.9 Score=36.47 Aligned_cols=30 Identities=13% Similarity=0.246 Sum_probs=25.7
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+|.|.| .|.||...++++.... .+++++..
T Consensus 151 ~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~ 181 (334)
T 3qwb_A 151 YVLLFAAAGGVGLILNQLLKMKG-AHTIAVAS 181 (334)
T ss_dssp EEEESSTTBHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 799999 9999999999988776 68877754
No 352
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=78.83 E-value=1.2 Score=41.96 Aligned_cols=95 Identities=14% Similarity=0.180 Sum_probs=55.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCc---eEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEe
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDV---ELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~---~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~ 83 (250)
+||.|+|+|.||+.+++.+.+++++ +++.+ |...... .+. +- .| +.+ ..+.+..
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~~~~~~---~~~--~~-~g--------------~~~--~~~~Vda 70 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AAEGTKV---DVA--QQ-YG--------------VSF--KLQQITP 70 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ESSCCSC---CHH--HH-HT--------------CEE--EECCCCT
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-ccchhhh---hHH--hh-cC--------------Cce--eEEeccc
Confidence 6899999999999999999988766 45544 3310000 000 00 00 000 0000100
Q ss_pred c---CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEeCC
Q 025639 84 F---RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (250)
Q Consensus 84 ~---~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis~~ 129 (250)
. ...+.+ -++ + |+|+.++-.+.+..-++..+++|+ -.|+..
T Consensus 71 dnv~~~l~aL-l~~-~-DvVIN~s~~~~~l~Im~acleaGv--~YlDTa 114 (480)
T 2ph5_A 71 QNYLEVIGST-LEE-N-DFLIDVSIGISSLALIILCNQKGA--LYINAA 114 (480)
T ss_dssp TTHHHHTGGG-CCT-T-CEEEECCSSSCHHHHHHHHHHHTC--EEEESS
T ss_pred hhHHHHHHHH-hcC-C-CEEEECCccccCHHHHHHHHHcCC--CEEECC
Confidence 0 002211 122 3 999998888888888999999998 567654
No 353
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=78.76 E-value=9.8 Score=33.29 Aligned_cols=92 Identities=20% Similarity=0.079 Sum_probs=55.0
Q ss_pred CCceeEEEEcCChHHHH-HHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 4 DKKIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 4 ~m~~kVaI~G~G~IGr~-~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
+| .||.++|.|.+|.. +++.|.++. .+|.+. |....++....|- .. + + + +.
T Consensus 3 ~~-~~i~~iGiGg~Gms~~A~~L~~~G-~~V~~~-D~~~~~~~~~~L~---------------~~-g--i-----~--v~ 54 (326)
T 3eag_A 3 AM-KHIHIIGIGGTFMGGLAAIAKEAG-FEVSGC-DAKMYPPMSTQLE---------------AL-G--I-----D--VY 54 (326)
T ss_dssp CC-CEEEEESCCSHHHHHHHHHHHHTT-CEEEEE-ESSCCTTHHHHHH---------------HT-T--C-----E--EE
T ss_pred CC-cEEEEEEECHHHHHHHHHHHHhCC-CEEEEE-cCCCCcHHHHHHH---------------hC-C--C-----E--EE
Confidence 45 58999999999996 888888887 775554 4312222111111 00 1 1 1 12
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEEe
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis 127 (250)
...+++++.+ .++|+|+-+.|.-.+......+.+.|. -|++
T Consensus 55 ~g~~~~~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi--~v~~ 95 (326)
T 3eag_A 55 EGFDAAQLDE--FKADVYVIGNVAKRGMDVVEAILNLGL--PYIS 95 (326)
T ss_dssp ESCCGGGGGS--CCCSEEEECTTCCTTCHHHHHHHHTTC--CEEE
T ss_pred CCCCHHHcCC--CCCCEEEECCCcCCCCHHHHHHHHcCC--cEEe
Confidence 2234554431 258999999988766666666777887 3554
No 354
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=78.63 E-value=1.3 Score=41.38 Aligned_cols=93 Identities=20% Similarity=0.189 Sum_probs=54.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCE--EEEEEec
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEK--PVAVFGF 84 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~--~i~v~~~ 84 (250)
-+|-|.|-|+||..+++.|.++ +++.-|.. +.+-+.++- ..++ + .+.++|. ...+..+
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~~--~~v~iIE~---d~~r~~~la------~~l~--------~-~~Vi~GD~td~~~L~e 295 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQT--YSVKLIER---NLQRAEKLS------EELE--------N-TIVFCGDAADQELLTE 295 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--SEEEEEES---CHHHHHHHH------HHCT--------T-SEEEESCTTCHHHHHH
T ss_pred cEEEEEcchHHHHHHHHHhhhc--CceEEEec---CHHHHHHHH------HHCC--------C-ceEEeccccchhhHhh
Confidence 4799999999999999998654 66666654 344333332 1112 2 3444442 1122222
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHH-HHHHHHCCCCEEEE
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDK-AAAHLKGGAKKVVI 126 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~-a~~~~~~Gak~vvi 126 (250)
+.+. .+|+++-+|+....--. +-.+.+.|++|+|.
T Consensus 296 ---e~i~----~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 296 ---ENID----QVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp ---TTGG----GCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred ---cCch----hhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 2232 68999999987533322 22334578888665
No 355
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=78.59 E-value=7.9 Score=34.04 Aligned_cols=29 Identities=28% Similarity=0.279 Sum_probs=23.9
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCce-EEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDVE-LVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~~-vvain 37 (250)
+|.|+|.|.||...++++.... .. ++++.
T Consensus 182 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 211 (363)
T 3m6i_A 182 PVLICGAGPIGLITMLCAKAAG-ACPLVITD 211 (363)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCSEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 6899999999999999888776 55 66664
No 356
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=78.29 E-value=2.6 Score=34.28 Aligned_cols=32 Identities=16% Similarity=0.220 Sum_probs=27.5
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCC-CceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRD-DVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~-~~~vvaind 38 (250)
++|.|.| +|.||+.+++.|.+++ ..+|+++..
T Consensus 5 ~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 5 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 6899999 9999999999999884 488887764
No 357
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=78.24 E-value=2 Score=37.46 Aligned_cols=39 Identities=18% Similarity=0.158 Sum_probs=29.1
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
+|.|.| .|.||+..++++.... .+++++.. +++.+.++.
T Consensus 143 ~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~---~~~~~~~~~ 182 (325)
T 3jyn_A 143 IILFHAAAGGVGSLACQWAKALG-AKLIGTVS---SPEKAAHAK 182 (325)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHT-CEEEEEES---SHHHHHHHH
T ss_pred EEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHH
Confidence 799999 9999999999888776 68877753 344444443
No 358
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=78.16 E-value=3.2 Score=36.95 Aligned_cols=29 Identities=24% Similarity=0.478 Sum_probs=24.1
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCc-eEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~-~vvain 37 (250)
+|.|.|.|.||...++++.... . +|+++.
T Consensus 196 ~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~ 225 (378)
T 3uko_A 196 NVAIFGLGTVGLAVAEGAKTAG-ASRIIGID 225 (378)
T ss_dssp CEEEECCSHHHHHHHHHHHHHT-CSCEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 6999999999999999887665 5 677774
No 359
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=77.99 E-value=2 Score=37.99 Aligned_cols=40 Identities=18% Similarity=0.096 Sum_probs=31.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
.||||+|.|.+|..++..+.... ++|+..+ . +++.+..+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G-~~V~l~d-~--~~~~~~~~~ 46 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGG-FRVKLYD-I--EPRQITGAL 46 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEC-S--CHHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCC-CEEEEEe-C--CHHHHHHHH
Confidence 58999999999999999998886 7876664 3 566555544
No 360
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=77.52 E-value=2.3 Score=36.10 Aligned_cols=32 Identities=25% Similarity=0.408 Sum_probs=27.2
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|||-|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG-YEVVVVDNL 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CEEEEEeCC
Confidence 4799999 9999999999999886 788777543
No 361
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=77.50 E-value=2.2 Score=39.75 Aligned_cols=30 Identities=10% Similarity=0.225 Sum_probs=25.3
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|+|.|+|.||+.+++.|.... +.|++.+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~G-a~Viv~D 250 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMG-SIVYVTE 250 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEEe
Confidence 48999999999999999998776 7766553
No 362
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=77.46 E-value=2.6 Score=36.93 Aligned_cols=32 Identities=16% Similarity=0.278 Sum_probs=26.1
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCCCc------eEEEee
Q 025639 6 KIKIGING-FGRIGRLVARVALQRDDV------ELVAVN 37 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~~~------~vvain 37 (250)
+|||.|.| +|.||+.+++.|.+++.+ +|+.+.
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D 42 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE 42 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEe
Confidence 37999999 799999999998887633 777764
No 363
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=77.28 E-value=1.4 Score=36.40 Aligned_cols=30 Identities=17% Similarity=0.132 Sum_probs=25.0
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
..+|.|.|+|++|+.+++.|.++. . ++++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g-~-v~vid 38 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE-V-FVLAE 38 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE-E-EEEES
T ss_pred CCEEEEECCChHHHHHHHHHHhCC-e-EEEEE
Confidence 468999999999999999998776 6 77774
No 364
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=77.26 E-value=3.3 Score=37.52 Aligned_cols=34 Identities=18% Similarity=0.453 Sum_probs=28.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChh
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTD 44 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~ 44 (250)
.+|+|.|+|.||+.+++.|.+.. .+|+ +.|. +++
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~G-akVv-v~D~--~~~ 207 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEG-AKLV-VTDV--NKA 207 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS--CHH
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEE-EEcC--CHH
Confidence 58999999999999999999887 7877 6676 444
No 365
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=77.26 E-value=2.5 Score=36.34 Aligned_cols=34 Identities=15% Similarity=0.232 Sum_probs=28.1
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|.+||.|-| +|.||+.+++.|.+++ .+|+++...
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 47 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKG-YRVHGLVAR 47 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCC-CeEEEEeCC
Confidence 447999999 9999999999999886 788887654
No 366
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=77.11 E-value=2.3 Score=37.93 Aligned_cols=30 Identities=27% Similarity=0.352 Sum_probs=24.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCc-eEEEe
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAV 36 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~-~vvai 36 (250)
+||+|.|.|.||..++..|..++-+ +++.+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~ 36 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVI 36 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEE
Confidence 6999999999999999988877633 55554
No 367
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=76.87 E-value=2.5 Score=36.43 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=27.0
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|.+||-|-| +|.||+.+++.|.++. .+|+++..
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G-~~V~~~~r 41 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKG-YAVNTTVR 41 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC-CEEEEEEc
Confidence 556899999 9999999999999886 78776543
No 368
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=76.85 E-value=2.7 Score=36.75 Aligned_cols=38 Identities=18% Similarity=0.302 Sum_probs=29.0
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhh
Q 025639 8 KIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYM 49 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~l 49 (250)
+|.|.|.|.||...++++.... .+++++.. +++.+.++
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~ 206 (340)
T 3s2e_A 169 WVVISGIGGLGHVAVQYARAMG-LRVAAVDI---DDAKLNLA 206 (340)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT-CEEEEEES---CHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CeEEEEeC---CHHHHHHH
Confidence 6899999999999999988776 68888753 34444444
No 369
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=76.80 E-value=2.4 Score=37.49 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=27.2
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
++|.|-| +|.||+.+++.|.+++ .+|+++..
T Consensus 12 ~~vlVTG~tGfIG~~l~~~L~~~G-~~V~~~~r 43 (404)
T 1i24_A 12 SRVMVIGGDGYCGWATALHLSKKN-YEVCIVDN 43 (404)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CeEEEeCCCcHHHHHHHHHHHhCC-CeEEEEEe
Confidence 6999999 9999999999999886 78887753
No 370
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=76.77 E-value=2.1 Score=36.77 Aligned_cols=32 Identities=28% Similarity=0.560 Sum_probs=27.0
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCC-CceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRD-DVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~-~~~vvaind 38 (250)
|||.|.| +|.||+.+++.|.++. ..+|+++..
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 5899999 9999999999988764 478887754
No 371
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=76.44 E-value=3.9 Score=35.78 Aligned_cols=29 Identities=28% Similarity=0.492 Sum_probs=24.8
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+|.|.|.|.||+..++++.... .+++++.
T Consensus 167 ~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~ 195 (339)
T 1rjw_A 167 WVAIYGIGGLGHVAVQYAKAMG-LNVVAVD 195 (339)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT-CEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CEEEEEe
Confidence 7999998889999999988776 6877775
No 372
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=76.43 E-value=2.8 Score=36.00 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=27.5
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|||.|.| +|.||+.+++.|.+++..+|+++...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 34 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG 34 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3799999 99999999999998734788887654
No 373
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=76.29 E-value=3.3 Score=36.21 Aligned_cols=32 Identities=22% Similarity=0.212 Sum_probs=27.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHc--CCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQ--RDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~--~~~~~vvaind~ 39 (250)
++|-|-| +|.||+.+++.|.+ +. .+|+++...
T Consensus 11 ~~vlVTGatG~IG~~l~~~L~~~~~g-~~V~~~~r~ 45 (362)
T 3sxp_A 11 QTILITGGAGFVGSNLAFHFQENHPK-AKVVVLDKF 45 (362)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTT-SEEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhhCCC-CeEEEEECC
Confidence 6899999 99999999999998 55 888888653
No 374
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=76.08 E-value=5.4 Score=34.56 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=25.5
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
+|.|.| .|.||...++++.... .+++++...
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~ 183 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGK 183 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESC
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 699999 6999999999888776 677777644
No 375
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=75.79 E-value=4.9 Score=35.88 Aligned_cols=40 Identities=15% Similarity=0.232 Sum_probs=28.9
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 8 KIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
+|.|+|.|.||...++++....-.+++++.. +++.+.++.
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~ 237 (380)
T 1vj0_A 198 TVVIQGAGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAE 237 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHH
T ss_pred EEEEECcCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHH
Confidence 7999999999999999888765247777753 344444443
No 376
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=75.74 E-value=5 Score=35.36 Aligned_cols=29 Identities=28% Similarity=0.366 Sum_probs=24.5
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCc-eEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~-~vvain 37 (250)
+|.|+|.|.||...++++.... . +++++.
T Consensus 174 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 203 (356)
T 1pl8_A 174 KVLVCGAGPIGMVTLLVAKAMG-AAQVVVTD 203 (356)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 7999999999999999887776 5 777775
No 377
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=75.72 E-value=3.1 Score=38.54 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=29.5
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.+|+|-|||-||+.+++.|.+.. ..+|+|.|.
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~G-akVVavsD~ 242 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKMG-AKVIAVSDI 242 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 58999999999999999998876 999999987
No 378
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=75.58 E-value=2.4 Score=36.62 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=28.1
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCC-CceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRD-DVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~-~~~vvaind~ 39 (250)
+||.|.| +|.||+.+++.|.+++ +++++++...
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~ 59 (346)
T 4egb_A 25 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDAL 59 (346)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred CeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecc
Confidence 7999999 9999999999988764 5888888653
No 379
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=75.35 E-value=2.6 Score=37.78 Aligned_cols=31 Identities=26% Similarity=0.259 Sum_probs=25.6
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
++||+|+|.|.+|..+...|.+.. .+|..++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G-~~V~l~~ 59 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG-QKVRLWS 59 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT-CCEEEEC
T ss_pred CCeEEEECccHHHHHHHHHHHHCC-CeEEEEe
Confidence 369999999999999999998875 6665554
No 380
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=75.24 E-value=7.7 Score=33.69 Aligned_cols=92 Identities=16% Similarity=0.194 Sum_probs=48.5
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCCC
Q 025639 8 KIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNP 87 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~p 87 (250)
+|.|.|.|.+|...++++.....-.++++ +. +++-+.++.++.-. ..+...+. ... +. .
T Consensus 163 ~VlV~GaG~vG~~aiq~ak~~G~~~vi~~-~~--~~~k~~~a~~lGa~------~~i~~~~~-~~~---~~--------~ 221 (346)
T 4a2c_A 163 NVIIIGAGTIGLLAIQCAVALGAKSVTAI-DI--SSEKLALAKSFGAM------QTFNSSEM-SAP---QM--------Q 221 (346)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEE-ES--CHHHHHHHHHTTCS------EEEETTTS-CHH---HH--------H
T ss_pred EEEEECCCCcchHHHHHHHHcCCcEEEEE-ec--hHHHHHHHHHcCCe------EEEeCCCC-CHH---HH--------H
Confidence 78999999999999998887763334444 33 34434343322110 01111110 000 00 0
Q ss_pred CCCCcccCCccEEEeecCCCCCHHHHHHHHHCCC
Q 025639 88 EEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGA 121 (250)
Q Consensus 88 ~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Ga 121 (250)
..+. +..++|+|+||+|...+.+.+-..++.|-
T Consensus 222 ~~~~-~~~g~d~v~d~~G~~~~~~~~~~~l~~~G 254 (346)
T 4a2c_A 222 SVLR-ELRFNQLILETAGVPQTVELAVEIAGPHA 254 (346)
T ss_dssp HHHG-GGCSSEEEEECSCSHHHHHHHHHHCCTTC
T ss_pred Hhhc-ccCCcccccccccccchhhhhhheecCCe
Confidence 0011 11378999999997655555555655554
No 381
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=75.24 E-value=3.2 Score=35.93 Aligned_cols=31 Identities=32% Similarity=0.585 Sum_probs=27.2
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
++|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 53 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERG-DKVVGIDN 53 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCC-CEEEEEEC
Confidence 6899999 9999999999999886 78887754
No 382
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=75.06 E-value=3.1 Score=36.59 Aligned_cols=39 Identities=10% Similarity=0.267 Sum_probs=29.5
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
+|.|.| .|.||...++++.... .+++++.. +++.+.++.
T Consensus 153 ~VlV~gg~G~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~ 192 (346)
T 3fbg_A 153 TLLIINGAGGVGSIATQIAKAYG-LRVITTAS---RNETIEWTK 192 (346)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT-CEEEEECC---SHHHHHHHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeC---CHHHHHHHH
Confidence 799995 9999999999988776 68887753 355444444
No 383
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=74.87 E-value=1.7 Score=38.81 Aligned_cols=24 Identities=25% Similarity=0.335 Sum_probs=21.1
Q ss_pred CceeEEEEcCChHHHHHHHHHHcC
Q 025639 5 KKIKIGINGFGRIGRLVARVALQR 28 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~ 28 (250)
|++||+|+|.|.+|..+...|.+.
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHc
Confidence 567999999999999999988754
No 384
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=74.80 E-value=3.9 Score=37.53 Aligned_cols=39 Identities=21% Similarity=0.221 Sum_probs=29.3
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
+|.|.| .|.||...++++.... ..++++.. +++.+.++.
T Consensus 231 ~VlV~GasG~vG~~avqlak~~G-a~vi~~~~---~~~~~~~~~ 270 (456)
T 3krt_A 231 NVLIWGASGGLGSYATQFALAGG-ANPICVVS---SPQKAEICR 270 (456)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTT-CEEEEEES---SHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHcC-CeEEEEEC---CHHHHHHHH
Confidence 699999 6999999999888776 68777753 355444443
No 385
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=74.58 E-value=2.6 Score=38.30 Aligned_cols=29 Identities=24% Similarity=0.382 Sum_probs=25.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
|||+|+|.|.+|..+...|.+ . .+|++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G-~~V~~~d 29 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-Q-NEVTIVD 29 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-T-SEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHhC-C-CEEEEEE
Confidence 489999999999999998887 5 8887775
No 386
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=74.44 E-value=2.6 Score=36.89 Aligned_cols=30 Identities=27% Similarity=0.367 Sum_probs=24.1
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEe
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvai 36 (250)
+||+|+|.|.+|..++..+..++..+++.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~ 34 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLF 34 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEE
Confidence 689999999999999999887752275444
No 387
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=74.43 E-value=2.9 Score=36.96 Aligned_cols=33 Identities=30% Similarity=0.307 Sum_probs=27.7
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 6 KIKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.++|.|.| +|.||+.+++.|.++. .+|+++...
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 38 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVHS 38 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEECC
Confidence 36899999 9999999999998876 788877543
No 388
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=74.23 E-value=2.4 Score=37.66 Aligned_cols=29 Identities=21% Similarity=0.164 Sum_probs=23.6
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCc-eEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~-~vvain 37 (250)
+|.|+|.|.||...++++.... . .++++.
T Consensus 193 ~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~ 222 (371)
T 1f8f_A 193 SFVTWGAGAVGLSALLAAKVCG-ASIIIAVD 222 (371)
T ss_dssp EEEEESCSHHHHHHHHHHHHHT-CSEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 7999999999999999887665 5 566664
No 389
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=74.18 E-value=7.1 Score=34.55 Aligned_cols=29 Identities=17% Similarity=0.311 Sum_probs=24.4
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCc-eEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~-~vvain 37 (250)
+|.|.|.|.||...++++.... . .|+++.
T Consensus 194 ~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 223 (374)
T 2jhf_A 194 TCAVFGLGGVGLSVIMGCKAAG-AARIIGVD 223 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 7999999999999999888776 5 677764
No 390
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=74.10 E-value=4.1 Score=35.82 Aligned_cols=86 Identities=22% Similarity=0.174 Sum_probs=53.1
Q ss_pred eeEEEE-c-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEec
Q 025639 7 IKIGIN-G-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (250)
Q Consensus 7 ~kVaI~-G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~ 84 (250)
-+++|+ | +|..|+.+++.+.++. +++++-.++ . . . + . . +.| ++++.
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~G-~~~v~~VnP----~-----------~---~-g------~-~--i~G--~~vy~- 61 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEYG-TNLVGGTTP----G-----------K---G-G------K-T--HLG--LPVFN- 61 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECT----T-----------C---T-T------C-E--ETT--EEEES-
T ss_pred CcEEEEECCCCCHHHHHHHHHHHCC-CcEEEEeCC----C-----------c---C-c------c-e--ECC--eeeec-
Confidence 358888 9 6999999999888776 776633334 0 0 0 0 0 1 223 22332
Q ss_pred CCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEE
Q 025639 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVI 126 (250)
Q Consensus 85 ~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvi 126 (250)
+.++++- +.++|+++-+++.....+.++..++.|.|.+++
T Consensus 62 -sl~el~~-~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~ 101 (305)
T 2fp4_A 62 -TVKEAKE-QTGATASVIYVPPPFAAAAINEAIDAEVPLVVC 101 (305)
T ss_dssp -SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred -hHHHhhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 2233331 125888888888777777777888889887443
No 391
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=74.00 E-value=2.9 Score=35.41 Aligned_cols=30 Identities=27% Similarity=0.220 Sum_probs=25.0
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 8 KIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
||+|+|+|.+|+.+++.|.+.+ .++...+.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g-~~v~v~~r 147 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG-LEVWVWNR 147 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCEEEECS
T ss_pred eEEEECCcHHHHHHHHHHHHCC-CEEEEEEC
Confidence 7999999999999999998876 57655553
No 392
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=73.94 E-value=5.3 Score=35.45 Aligned_cols=29 Identities=14% Similarity=0.250 Sum_probs=24.3
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCc-eEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~-~vvain 37 (250)
+|.|.|.|.||...++++.... . +|+++.
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 227 (376)
T 1e3i_A 198 TCAVFGLGCVGLSAIIGCKIAG-ASRIIAID 227 (376)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 7999999999999999888776 5 677764
No 393
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=73.87 E-value=3.4 Score=35.72 Aligned_cols=31 Identities=23% Similarity=0.346 Sum_probs=27.3
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
++|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (343)
T 2b69_A 28 KRILITGGAGFVGSHLTDKLMMDG-HEVTVVDN 59 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEEcCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 6899999 9999999999999886 78888764
No 394
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=73.78 E-value=4.2 Score=36.09 Aligned_cols=29 Identities=14% Similarity=0.237 Sum_probs=23.7
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCc-eEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~-~vvain 37 (250)
+|.|.|.|.||...++++.... . +|+++.
T Consensus 194 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 223 (373)
T 1p0f_A 194 TCAVFGLGGVGFSAIVGCKAAG-ASRIIGVG 223 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 7999999999999999887665 5 676664
No 395
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=73.78 E-value=3.2 Score=34.90 Aligned_cols=30 Identities=30% Similarity=0.576 Sum_probs=26.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+||.|.| +|.||+.+++.|.++. .+|+++.
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 43 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGKN-VEVIPTD 43 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSS-EEEEEEC
T ss_pred ceEEEECCCChHHHHHHHHHHhCC-CeEEecc
Confidence 6899999 9999999999999876 8888775
No 396
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=73.57 E-value=1.9 Score=38.17 Aligned_cols=30 Identities=20% Similarity=0.434 Sum_probs=24.9
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 8 KIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+|.|.|.|.||...++++.... ..++++..
T Consensus 183 ~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~ 212 (357)
T 2cf5_A 183 RGGILGLGGVGHMGVKIAKAMG-HHVTVISS 212 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CeEEEEeC
Confidence 7999999999999999887766 57777754
No 397
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=73.55 E-value=2.6 Score=35.43 Aligned_cols=24 Identities=21% Similarity=0.493 Sum_probs=21.8
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCC
Q 025639 6 KIKIGING-FGRIGRLVARVALQRD 29 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~ 29 (250)
++||.|.| +|.||+.+++.|.+++
T Consensus 6 ~~~vlVtGatG~iG~~l~~~L~~~g 30 (319)
T 4b8w_A 6 SMRILVTGGSGLVGKAIQKVVADGA 30 (319)
T ss_dssp CCEEEEETCSSHHHHHHHHHHHTTT
T ss_pred CCeEEEECCCcHHHHHHHHHHHhcC
Confidence 47999999 9999999999999875
No 398
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=73.41 E-value=2.7 Score=36.29 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=26.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCC-CceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRD-DVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~-~~~vvaind 38 (250)
++|.|.| +|.||+.+++.|.++. ..+|+++..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 5899999 9999999999988762 378887754
No 399
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=73.30 E-value=4 Score=36.04 Aligned_cols=32 Identities=22% Similarity=0.233 Sum_probs=25.3
Q ss_pred eeEEEEcCChHHHHH-HHHH-HcCCCce-EEEeeCC
Q 025639 7 IKIGINGFGRIGRLV-ARVA-LQRDDVE-LVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~-lr~l-~~~~~~~-vvaind~ 39 (250)
-+|.|+|.|.||... ++++ .... .+ ++++...
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~G-a~~Vi~~~~~ 208 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKG-YENLYCLGRR 208 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTC-CCEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcC-CcEEEEEeCC
Confidence 379999999999999 9988 6555 55 7777643
No 400
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=73.05 E-value=3.5 Score=37.16 Aligned_cols=31 Identities=19% Similarity=0.224 Sum_probs=26.3
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.+|+|.|+|.||+.+++.+.... .+|++++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~G-a~V~~~d~ 199 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMG-ATVTVLDI 199 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 58999999999999999998876 67776653
No 401
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=73.00 E-value=3.3 Score=39.14 Aligned_cols=30 Identities=20% Similarity=0.346 Sum_probs=25.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|+|.|+|.||+.+++.+.... ++|++++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G-a~Viv~d 304 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG-ARVSVTE 304 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEe
Confidence 48999999999999999998776 7876664
No 402
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=72.95 E-value=3.4 Score=38.53 Aligned_cols=32 Identities=19% Similarity=0.351 Sum_probs=28.1
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|||.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 148 m~VLVTGatG~IG~~l~~~L~~~G-~~V~~l~R~ 180 (516)
T 3oh8_A 148 LTVAITGSRGLVGRALTAQLQTGG-HEVIQLVRK 180 (516)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 6899999 9999999999999886 788888654
No 403
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=72.81 E-value=3.9 Score=35.52 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=27.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++|.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 60 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLLKLD-QKVVGLDNF 60 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 5899999 9999999999999886 788887643
No 404
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=72.68 E-value=7.5 Score=34.50 Aligned_cols=29 Identities=7% Similarity=-0.034 Sum_probs=24.7
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEee
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+|.|+| .|.||...++++.... .+++++.
T Consensus 167 ~VlV~Ga~G~vG~~a~qla~~~G-a~Vi~~~ 196 (371)
T 3gqv_A 167 YVLVYGGSTATATVTMQMLRLSG-YIPIATC 196 (371)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCC-CEEEEEe
Confidence 699999 5999999999988776 6887774
No 405
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=72.55 E-value=3.7 Score=36.71 Aligned_cols=31 Identities=29% Similarity=0.484 Sum_probs=27.7
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.||+|+|.|.+|+.+++++.+.+ +++++++.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G-~~vi~~d~ 45 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMG-YKIAVLDP 45 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEeC
Confidence 48999999999999999999886 99888863
No 406
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=72.54 E-value=3.9 Score=34.75 Aligned_cols=31 Identities=23% Similarity=0.489 Sum_probs=26.5
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|||-|-| +|.||+.+++.|.++. .+|+++..
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 32 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARG-LEVAVLDN 32 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEECC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC-CEEEEEEC
Confidence 3799999 9999999999999876 78877754
No 407
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=72.47 E-value=3.2 Score=36.08 Aligned_cols=31 Identities=32% Similarity=0.489 Sum_probs=24.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCC-ceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDD-VELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~-~~vvain 37 (250)
+||+|+|.|.+|..++..|..++- .+|+.++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d 33 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFID 33 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEc
Confidence 599999999999999998887641 3555553
No 408
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=72.39 E-value=6.5 Score=34.33 Aligned_cols=31 Identities=6% Similarity=-0.015 Sum_probs=25.5
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
-+|.|.| .|.||+.+++++.... .+++++..
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~ 199 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAG 199 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-CEEEEEeC
Confidence 3799999 6999999999988776 68777653
No 409
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=72.37 E-value=3 Score=35.16 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=25.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|||.|.| +|.||+.+++.|. +. .+|+++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r 31 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PV-GNLIALDV 31 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TT-SEEEEECT
T ss_pred CeEEEECCCCHHHHHHHHHhh-cC-CeEEEecc
Confidence 3799999 9999999999998 65 88888754
No 410
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=72.37 E-value=3.9 Score=35.37 Aligned_cols=31 Identities=16% Similarity=0.306 Sum_probs=25.8
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
+|.|.| .|.||...++++.... .+++++...
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G-a~Vi~~~~~ 180 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG-YQVAAVSGR 180 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESC
T ss_pred eEEEECCCcHHHHHHHHHHHHcC-CEEEEEeCC
Confidence 499999 6999999999988776 688887643
No 411
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=72.35 E-value=3.4 Score=35.58 Aligned_cols=31 Identities=16% Similarity=0.139 Sum_probs=26.9
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
|+|||+|+|-| .|+.+++++.+.. ++++.+.
T Consensus 1 m~m~Ililg~g-~~~~l~~a~~~~G-~~v~~~~ 31 (334)
T 2r85_A 1 MKVRIATYASH-SALQILKGAKDEG-FETIAFG 31 (334)
T ss_dssp CCSEEEEESST-THHHHHHHHHHTT-CCEEEES
T ss_pred CceEEEEECCh-hHHHHHHHHHhCC-CEEEEEE
Confidence 66899999988 9999999999886 8887775
No 412
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=72.34 E-value=3.8 Score=35.09 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=27.5
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++|.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~ 36 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKG-YEVYGADRR 36 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECSC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEECC
Confidence 5899999 9999999999999886 788877643
No 413
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=71.86 E-value=4.4 Score=35.42 Aligned_cols=33 Identities=12% Similarity=-0.018 Sum_probs=24.9
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++|+|+|+|.+|+.+++.+.+...++-|.+-+.
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 689999999999999998876422644445554
No 414
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=71.45 E-value=3.1 Score=35.81 Aligned_cols=36 Identities=22% Similarity=0.291 Sum_probs=26.4
Q ss_pred CCCCCceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 1 MAGDKKIKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 1 ~~~~m~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|+..| .+|-|-| +|.||+.+++.|.+++ .+|+++..
T Consensus 1 ~~~~~-~~vlVTGatGfIG~~l~~~L~~~G-~~V~~~~r 37 (337)
T 2c29_D 1 MGSQS-ETVCVTGASGFIGSWLVMRLLERG-YTVRATVR 37 (337)
T ss_dssp ------CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCCC-CEEEEECCchHHHHHHHHHHHHCC-CEEEEEEC
Confidence 44444 5899999 9999999999999886 78776543
No 415
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=71.38 E-value=7.5 Score=34.37 Aligned_cols=29 Identities=17% Similarity=0.327 Sum_probs=24.4
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCc-eEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~-~vvain 37 (250)
+|.|.|.|.||...++++.... . .|+++.
T Consensus 195 ~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 224 (374)
T 1cdo_A 195 TCAVFGLGAVGLAAVMGCHSAG-AKRIIAVD 224 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEc
Confidence 7999999999999999888776 5 677764
No 416
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=71.31 E-value=3.2 Score=36.47 Aligned_cols=30 Identities=40% Similarity=0.703 Sum_probs=24.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCc--eEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDV--ELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~--~vvain 37 (250)
|||+|+|.|.+|..++..|...+ + +|+.+.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g-~~~~V~l~D 32 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG-FAREMVLID 32 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CCCeEEEEe
Confidence 48999999999999999888765 4 666553
No 417
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=71.28 E-value=3.4 Score=35.21 Aligned_cols=30 Identities=27% Similarity=0.400 Sum_probs=24.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
++|-|-| +|.||+.+++.|.+++ .++.+..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~ 32 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVIDN 32 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEEc
Confidence 4899999 9999999999999886 5555543
No 418
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=71.18 E-value=4.3 Score=34.86 Aligned_cols=31 Identities=26% Similarity=0.310 Sum_probs=27.0
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
++|-|-| +|.||+.+++.|.+++ .+|+++..
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 37 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHG-YDVVIADN 37 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred cEEEEecCCcHHHHHHHHHHHHCC-CcEEEEec
Confidence 6899999 9999999999999886 78777754
No 419
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=71.01 E-value=4.8 Score=35.59 Aligned_cols=29 Identities=17% Similarity=0.286 Sum_probs=24.0
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCc-eEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~-~vvain 37 (250)
+|.|.|.|.||...++++.... . .++++.
T Consensus 193 ~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~ 222 (373)
T 2fzw_A 193 VCAVFGLGGVGLAVIMGCKVAG-ASRIIGVD 222 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 7999999999999999887665 5 676764
No 420
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=70.87 E-value=3.9 Score=36.29 Aligned_cols=33 Identities=6% Similarity=-0.089 Sum_probs=27.0
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
|+|+||++|.| -|+.+++.+.+.+ ++++++...
T Consensus 1 ~~~~I~~lGsg-l~~~~~~aAk~lG-~~viv~d~~ 33 (320)
T 2pbz_A 1 MSLIVSTIASH-SSLQILLGAKKEG-FKTRLYVSP 33 (320)
T ss_dssp ---CEEEESST-THHHHHHHHHHTT-CCEEEEECT
T ss_pred CceEEEEEcCH-hHHHHHHHHHHCC-CEEEEEECC
Confidence 77899999999 8999999999887 998888755
No 421
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=70.87 E-value=3.7 Score=38.56 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=27.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcC-CCc-eEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQR-DDV-ELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~-~~~-~vvaind 38 (250)
+||+|+|.|.+|..+...|.+. . + +|+.++-
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G-~~~V~~~D~ 51 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPC-FEKVLGFQR 51 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTT-CCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHhCC-CCeEEEEEC
Confidence 6999999999999999999988 5 7 8887753
No 422
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=70.59 E-value=4.6 Score=34.36 Aligned_cols=33 Identities=21% Similarity=0.397 Sum_probs=27.6
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 6 KIKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
+++|-|-| +|.||+.+++.|.+++ .+|+++...
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r~ 45 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQN-VEVFGTSRN 45 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred cceEEEECCCChHHHHHHHHHHHCC-CEEEEEecC
Confidence 36899999 9999999999999886 788777543
No 423
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=70.19 E-value=4.9 Score=35.67 Aligned_cols=29 Identities=28% Similarity=0.391 Sum_probs=25.0
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEee
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+|.|.| .|.||+..++++.... .+++++.
T Consensus 186 ~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~ 215 (375)
T 2vn8_A 186 RVLILGASGGVGTFAIQVMKAWD-AHVTAVC 215 (375)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 799999 8999999999888776 6877765
No 424
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=70.03 E-value=4.7 Score=35.07 Aligned_cols=31 Identities=23% Similarity=0.313 Sum_probs=26.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
++|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG-YEVHGIKR 33 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 4899999 9999999999999886 78877754
No 425
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=69.93 E-value=4.1 Score=35.19 Aligned_cols=32 Identities=22% Similarity=0.264 Sum_probs=27.0
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++|.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 20 ~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~ 52 (347)
T 4id9_A 20 HMILVTGSAGRVGRAVVAALRTQG-RTVRGFDLR 52 (347)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTT-CCEEEEESS
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CEEEEEeCC
Confidence 6899999 9999999999999886 788777543
No 426
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=69.90 E-value=2.6 Score=36.95 Aligned_cols=31 Identities=23% Similarity=0.257 Sum_probs=24.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCC------CceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRD------DVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~------~~~vvain 37 (250)
+||+|+|.|.+|..+...|.+.. ..+|..++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~ 45 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWV 45 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEE
Confidence 79999999999999999887653 14665554
No 427
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=69.71 E-value=3.9 Score=35.44 Aligned_cols=32 Identities=31% Similarity=0.473 Sum_probs=26.5
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|||.|.| +|.||+.+++.|.+++..+|+++..
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r 33 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEec
Confidence 3799999 9999999999998863478887754
No 428
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=69.71 E-value=4.7 Score=35.15 Aligned_cols=29 Identities=38% Similarity=0.549 Sum_probs=24.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCc--eEEEe
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDV--ELVAV 36 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~--~vvai 36 (250)
+||+|+|.|.+|..++..+...+ . +++-+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g-~~~eV~L~ 31 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRG-SCSELVLV 31 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CCCEEEEE
Confidence 48999999999999999888775 4 65555
No 429
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=69.69 E-value=3.4 Score=36.20 Aligned_cols=29 Identities=14% Similarity=0.373 Sum_probs=24.3
Q ss_pred eEEEEcCChHHHHHHHHHHcC--CCceEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQR--DDVELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~--~~~~vvain 37 (250)
+|.|.|.|.||...++++... . .+++++.
T Consensus 173 ~VlV~GaG~vG~~aiqlak~~~~G-a~Vi~~~ 203 (344)
T 2h6e_A 173 VVIVNGIGGLAVYTIQILKALMKN-ITIVGIS 203 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTT-CEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHhcCC-CEEEEEe
Confidence 799999999999999988766 5 6777764
No 430
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=69.67 E-value=5.1 Score=35.45 Aligned_cols=33 Identities=24% Similarity=0.374 Sum_probs=25.5
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++||+|+|.|.+|..++..|...+.++ |.+-|.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~-V~L~D~ 41 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELAD-VVLYDV 41 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCE-EEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 379999999999999999988765337 444454
No 431
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=69.22 E-value=5.5 Score=35.08 Aligned_cols=39 Identities=23% Similarity=0.153 Sum_probs=29.0
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
+|.|.| .|.||+..++++.... .+++++.. +++.+..+.
T Consensus 170 ~VlV~Gg~g~iG~~~~~~a~~~G-a~Vi~~~~---~~~~~~~~~ 209 (353)
T 4dup_A 170 SVLIHGGTSGIGTTAIQLARAFG-AEVYATAG---STGKCEACE 209 (353)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTT-CEEEEEES---SHHHHHHHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeC---CHHHHHHHH
Confidence 799996 9999999999988876 68777753 344444443
No 432
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=69.08 E-value=5.5 Score=32.45 Aligned_cols=30 Identities=17% Similarity=0.338 Sum_probs=26.0
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+|-|.| +|-||+.+++.|.++. .+|+++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g-~~V~~~~r 33 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAG-HTVIGIDR 33 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 799999 9999999999999886 78777754
No 433
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=68.95 E-value=8.8 Score=34.34 Aligned_cols=29 Identities=24% Similarity=0.259 Sum_probs=24.1
Q ss_pred eEEEEcCChHHHHHHHHHHcCCCc-eEEEee
Q 025639 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (250)
Q Consensus 8 kVaI~G~G~IGr~~lr~l~~~~~~-~vvain 37 (250)
+|.|.|.|.||...++++.... . .|+++.
T Consensus 188 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 217 (398)
T 2dph_A 188 HVYIAGAGPVGRCAAAGARLLG-AACVIVGD 217 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CSEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEc
Confidence 7999999999999999887665 5 777775
No 434
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=68.94 E-value=3.8 Score=37.25 Aligned_cols=32 Identities=25% Similarity=0.459 Sum_probs=26.5
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCc-eEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~-~vvaind~ 39 (250)
.+|+|+|+|.+|+.+++.+...+ + +|+++|..
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G-~~~V~v~~r~ 200 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRG-VRAVLVANRT 200 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC-CSEEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CCEEEEEeCC
Confidence 48999999999999999988776 6 77777643
No 435
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=68.85 E-value=4.9 Score=34.49 Aligned_cols=30 Identities=20% Similarity=0.404 Sum_probs=26.0
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvain 37 (250)
|||-|-| +|.||+.+++.|.+++ .+|+++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 31 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNG-HDVIILD 31 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 3799999 9999999999999886 7887774
No 436
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=68.85 E-value=5.4 Score=31.55 Aligned_cols=30 Identities=23% Similarity=0.374 Sum_probs=25.4
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|||-|.| +|.||+.+++.|. +. .+++.+..
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g-~~V~~~~r 34 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KK-AEVITAGR 34 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TT-SEEEEEES
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CC-CeEEEEec
Confidence 4799999 9999999999998 75 78777653
No 437
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=68.75 E-value=3.9 Score=34.98 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=25.8
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.||+|+|.|.+|+.+++.|.+.+ +++..++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g-~~V~v~~r 160 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG-AKVFLWNR 160 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHcC-CEEEEEEC
Confidence 58999999999999999998776 57666653
No 438
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=68.73 E-value=5.4 Score=35.26 Aligned_cols=29 Identities=28% Similarity=0.407 Sum_probs=24.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCc-eEEEe
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAV 36 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~-~vvai 36 (250)
.||+|+|.|.+|..++..+..++ + +++-+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g-~~~v~l~ 38 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKE-LADVVLV 38 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CCeEEEE
Confidence 58999999999999999888776 6 65544
No 439
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=68.51 E-value=5.1 Score=35.01 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=26.5
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+|||.|+|-|..|-.++..|..+. ++++.+.
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G-~~v~v~E 31 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHG-IKVTIYE 31 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC-CCEEEEe
Confidence 369999999999999999998886 7877664
No 440
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=68.34 E-value=4.9 Score=36.62 Aligned_cols=30 Identities=20% Similarity=0.129 Sum_probs=25.3
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|+|+|+|.||+.+++.+...+ .+|++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~V~v~D 202 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLG-AIVRAFD 202 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEc
Confidence 58999999999999999988776 6766654
No 441
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=68.30 E-value=4.8 Score=35.56 Aligned_cols=22 Identities=27% Similarity=0.489 Sum_probs=19.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHcC
Q 025639 7 IKIGING-FGRIGRLVARVALQR 28 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~ 28 (250)
|||+|.| +|.||..++..|..+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~ 23 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQ 23 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC
Confidence 4899999 999999999988765
No 442
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=68.04 E-value=5.6 Score=35.52 Aligned_cols=31 Identities=29% Similarity=0.532 Sum_probs=27.6
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.||+|+|.|.+|+.+++++.+.+ ++++++..
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG-~~viv~d~ 43 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMG-YKVVVLDP 43 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 58999999999999999999887 89888853
No 443
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=67.61 E-value=5.2 Score=34.46 Aligned_cols=31 Identities=23% Similarity=0.423 Sum_probs=27.3
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
++|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r 52 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQG-HEILVIDN 52 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGT-CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 6899999 9999999999999886 78887764
No 444
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=67.56 E-value=5.6 Score=33.49 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=26.6
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
||.|.| +|.||+.+++.|.+++..+|+++...
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 33 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 33 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccC
Confidence 578999 99999999999998764677777654
No 445
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=67.40 E-value=3.6 Score=36.17 Aligned_cols=23 Identities=22% Similarity=0.449 Sum_probs=20.5
Q ss_pred eeEEEEcCChHHHHHHHHHHcCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRD 29 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~ 29 (250)
.||.|+|.|-+|-.++..|....
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aG 59 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCG 59 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT
T ss_pred CeEEEECcCHHHHHHHHHHHHcC
Confidence 58999999999999999888654
No 446
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=66.98 E-value=5.7 Score=34.99 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=24.8
Q ss_pred ceeEEEEc-CChHHHHHHHHHHcCCCc------eEEEe
Q 025639 6 KIKIGING-FGRIGRLVARVALQRDDV------ELVAV 36 (250)
Q Consensus 6 ~~kVaI~G-~G~IGr~~lr~l~~~~~~------~vvai 36 (250)
++||+|.| .|.||..++..|..++.+ +|+.+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~ 42 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLL 42 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEE
Confidence 47999999 599999999988876633 66665
No 447
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=66.61 E-value=6.2 Score=33.39 Aligned_cols=33 Identities=18% Similarity=0.072 Sum_probs=27.8
Q ss_pred CceeEEEEcCCh---------HHHHHHHHHHcCCCceEEEeeC
Q 025639 5 KKIKIGINGFGR---------IGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 5 m~~kVaI~G~G~---------IGr~~lr~l~~~~~~~vvaind 38 (250)
|++||+|+|-|. -|+.+++++.+.. ++++.++.
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G-~~v~~~~~ 42 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGG-IDAYPVDP 42 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT-CEEEEECT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCC-CeEEEEec
Confidence 678999999887 7899999998886 88877753
No 448
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=66.50 E-value=6.1 Score=35.38 Aligned_cols=114 Identities=21% Similarity=0.195 Sum_probs=55.6
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccc-cccccCCCcceEEeCCeeeE-EC-CEEEEEEe
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYD-SVHGQWKHNELKVKDEKTLL-FG-EKPVAVFG 83 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~yd-S~~G~~~~~~v~~~~~~~l~-~~-g~~i~v~~ 83 (250)
-||.|+|.|.+|..++..|....-=++.-+.+-..++..+..-+-|. +..|+.. ... .. . .|. +| .-.+....
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~K-a~~-~~-~-~l~~~np~v~v~~~~ 194 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNK-TEV-IK-R-ELLKRNSEISVSEIA 194 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBH-HHH-HH-H-HHHHHCTTSEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChH-HHH-HH-H-HHHHHCCCCeEEEee
Confidence 58999999999999999988765113333433223444443332221 1124322 110 00 0 010 11 11222222
Q ss_pred cC-CCCC-CC-cccCCccEEEeecCCCC-CHHHH-HHHHHCCCCEEEEeC
Q 025639 84 FR-NPEE-IP-WAKTGAEYVVESTGVFT-DKDKA-AAHLKGGAKKVVISA 128 (250)
Q Consensus 84 ~~-~p~~-i~-w~~~~vdiV~~~tg~~~-~~~~a-~~~~~~Gak~vvis~ 128 (250)
+. +.++ +. | .+.|+|++|+..+. ++... ....+.|. .+|++
T Consensus 195 ~~i~~~~~~~~~--~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~--p~i~~ 240 (353)
T 3h5n_A 195 LNINDYTDLHKV--PEADIWVVSADHPFNLINWVNKYCVRANQ--PYINA 240 (353)
T ss_dssp CCCCSGGGGGGS--CCCSEEEECCCCSTTHHHHHHHHHHHTTC--CEEEE
T ss_pred cccCchhhhhHh--ccCCEEEEecCChHHHHHHHHHHHHHhCC--CEEEE
Confidence 11 1111 11 3 37899999998887 55433 34556675 34443
No 449
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=66.47 E-value=5.6 Score=36.90 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=28.3
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
++||||+|+|.+|..+...|.+.. ++|+.++-
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G-~~V~~~D~ 39 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG-HEVVCVDK 39 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 589999999999999999999886 88888864
No 450
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=66.47 E-value=6.1 Score=34.25 Aligned_cols=32 Identities=9% Similarity=0.033 Sum_probs=27.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++|.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 42 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSLT 42 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-CeEEEEeCC
Confidence 5899999 9999999999999886 788877643
No 451
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=66.40 E-value=6 Score=35.10 Aligned_cols=29 Identities=31% Similarity=0.448 Sum_probs=24.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCc-eEEEe
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAV 36 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~-~vvai 36 (250)
+||+|+|.|.+|..++..|..++ + +++-+
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~-~~~v~L~ 37 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKE-LGDVVLF 37 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CCeEEEE
Confidence 69999999999999999888776 5 65544
No 452
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=66.30 E-value=5.8 Score=35.73 Aligned_cols=30 Identities=17% Similarity=0.207 Sum_probs=25.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|+|+|+|.||+.+++.+...+ .+|++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~V~~~d 202 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLG-AVVMATD 202 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 58999999999999999988776 6755554
No 453
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=66.22 E-value=7.4 Score=33.79 Aligned_cols=30 Identities=13% Similarity=0.216 Sum_probs=25.3
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+|.|.| .|.||+.+++++.... .+++++..
T Consensus 148 ~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~ 178 (333)
T 1wly_A 148 YVLIHAAAGGMGHIMVPWARHLG-ATVIGTVS 178 (333)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEECCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 689999 8999999999988876 68777753
No 454
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=66.12 E-value=5 Score=37.36 Aligned_cols=41 Identities=15% Similarity=0.177 Sum_probs=31.4
Q ss_pred CCceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhh
Q 025639 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYM 49 (250)
Q Consensus 4 ~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~l 49 (250)
+| .+|+|+|+|-||-.+.-++.+.. ++|+++ |. +++-+..|
T Consensus 20 ~m-~~IaViGlGYVGLp~A~~~A~~G-~~V~g~-Di--d~~kV~~l 60 (444)
T 3vtf_A 20 HM-ASLSVLGLGYVGVVHAVGFALLG-HRVVGY-DV--NPSIVERL 60 (444)
T ss_dssp CC-CEEEEECCSHHHHHHHHHHHHHT-CEEEEE-CS--CHHHHHHH
T ss_pred CC-CEEEEEccCHHHHHHHHHHHhCC-CcEEEE-EC--CHHHHHHH
Confidence 46 49999999999988888888776 899888 33 56555444
No 455
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=66.11 E-value=5.2 Score=34.59 Aligned_cols=33 Identities=24% Similarity=0.193 Sum_probs=27.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCC----ceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDD----VELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~----~~vvaind~ 39 (250)
+||.|.| +|.||+.+++.|.+++. .+|+++...
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~ 39 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARR 39 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCC
Confidence 5899999 99999999999988753 788877654
No 456
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=66.08 E-value=5.9 Score=34.40 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=27.1
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++|.|.| +|.||+.+++.|.+++..+|+++...
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 6899999 99999999999998764677777653
No 457
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=65.99 E-value=6 Score=34.87 Aligned_cols=32 Identities=25% Similarity=0.207 Sum_probs=24.6
Q ss_pred CceeEEEEc-CChHHHHHHHHHHcCCC-ceEEEe
Q 025639 5 KKIKIGING-FGRIGRLVARVALQRDD-VELVAV 36 (250)
Q Consensus 5 m~~kVaI~G-~G~IGr~~lr~l~~~~~-~~vvai 36 (250)
+++||+|.| .|.||..++..|.+++. -+|+.+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~ 40 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLY 40 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEE
Confidence 457999999 99999999998877642 355555
No 458
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=65.83 E-value=7.1 Score=34.36 Aligned_cols=34 Identities=18% Similarity=0.116 Sum_probs=26.8
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
..+++|+|+|.+|+..++++.+...++.+.|.+.
T Consensus 125 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r 158 (322)
T 1omo_A 125 SSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV 158 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS
T ss_pred CCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC
Confidence 3689999999999999998886323666667665
No 459
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=65.83 E-value=5.8 Score=34.92 Aligned_cols=31 Identities=32% Similarity=0.410 Sum_probs=24.0
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCc-eEEEe
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDV-ELVAV 36 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~-~vvai 36 (250)
++||+|.|.|.||..++-.+..++-+ +|+-+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~ 38 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLI 38 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 36999999999999998888877522 55444
No 460
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=65.11 E-value=5 Score=36.65 Aligned_cols=30 Identities=13% Similarity=0.081 Sum_probs=25.2
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.||+|+|+|++|+.+++.+.... .+|++++
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D 214 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLG-AKTTGYD 214 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEEe
Confidence 58999999999999999988766 6766554
No 461
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=64.78 E-value=6.7 Score=35.05 Aligned_cols=30 Identities=23% Similarity=0.371 Sum_probs=26.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|+|.|.|.||+.+++.+.... .+|++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~d 196 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMG-AQVTILD 196 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEE
Confidence 58999999999999999998877 6777665
No 462
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=64.66 E-value=6.9 Score=34.40 Aligned_cols=32 Identities=16% Similarity=0.254 Sum_probs=27.0
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
++|.|.| +|.||+.+++.|.+++..+|+++..
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r 65 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDN 65 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCceEEEEEC
Confidence 5899999 9999999999998875378877754
No 463
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=64.36 E-value=23 Score=32.09 Aligned_cols=40 Identities=20% Similarity=0.053 Sum_probs=29.3
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
-+|.|.| .|.||...++++.... .+++++.. +.+.+..+.
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~---~~~~~~~~~ 262 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVS---SAQKEAAVR 262 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEES---SHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeC---CHHHHHHHH
Confidence 3699999 6999999999988776 67777753 344444443
No 464
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=64.13 E-value=25 Score=32.37 Aligned_cols=93 Identities=16% Similarity=0.091 Sum_probs=52.6
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~~ 86 (250)
.+|.|+|.|.+|...++.|.+.. -+++.|..- ..++ +..+. +. +.+++.. .+.+
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g-a~V~vi~~~-~~~~-~~~l~--~~-------~~i~~~~--------------~~~~ 66 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG-ARLTVNALT-FIPQ-FTVWA--NE-------GMLTLVE--------------GPFD 66 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-BEEEEEESS-CCHH-HHHHH--TT-------TSCEEEE--------------SSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCc-CEEEEEcCC-CCHH-HHHHH--hc-------CCEEEEE--------------CCCC
Confidence 58999999999999999999886 555555432 2332 12221 10 1111111 1112
Q ss_pred CCCCCcccCCccEEEeecCCC-CCHHHHHHHHHCCCCEEEEeCC
Q 025639 87 PEEIPWAKTGAEYVVESTGVF-TDKDKAAAHLKGGAKKVVISAP 129 (250)
Q Consensus 87 p~~i~w~~~~vdiV~~~tg~~-~~~~~a~~~~~~Gak~vvis~~ 129 (250)
++.++ ++|+||=|||.- ....-+..+.+.|..--+++.+
T Consensus 67 ~~~l~----~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 67 ETLLD----SCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp GGGGT----TCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCT
T ss_pred ccccC----CccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCc
Confidence 33333 789999999876 3444444555677632235555
No 465
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=64.07 E-value=7.6 Score=34.34 Aligned_cols=31 Identities=26% Similarity=0.445 Sum_probs=27.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.||+|+|-|..|+.+++++.+.+ ++++.+..
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G-~~v~~~~~ 32 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMG-FYVIVLDP 32 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 48999999999999999998887 78887764
No 466
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=64.05 E-value=5.8 Score=35.83 Aligned_cols=33 Identities=21% Similarity=0.474 Sum_probs=28.4
Q ss_pred CC--ceeEEEEcCChHHHHHHHHHHcCCCceEEEee
Q 025639 4 DK--KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 4 ~m--~~kVaI~G~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+| ..||+|+|-|..|+.+++++.+.+ ++++++.
T Consensus 20 ~mm~~~~I~ilGgG~lg~~l~~aa~~lG-~~v~~~d 54 (403)
T 3k5i_A 20 HMWNSRKVGVLGGGQLGRMLVESANRLN-IQVNVLD 54 (403)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHT-CEEEEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEE
Confidence 45 469999999999999999998876 8888887
No 467
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=63.94 E-value=8.4 Score=34.31 Aligned_cols=39 Identities=10% Similarity=0.306 Sum_probs=28.2
Q ss_pred eEEEE--cCChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhh
Q 025639 8 KIGIN--GFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMF 50 (250)
Q Consensus 8 kVaI~--G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll 50 (250)
+|.|. |.|.||...++++.... .+++++.. +++.+.++.
T Consensus 173 ~vlV~gag~G~vG~~a~q~a~~~G-a~Vi~~~~---~~~~~~~~~ 213 (379)
T 3iup_A 173 SALVHTAAASNLGQMLNQICLKDG-IKLVNIVR---KQEQADLLK 213 (379)
T ss_dssp SCEEESSTTSHHHHHHHHHHHHHT-CCEEEEES---SHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHCC-CEEEEEEC---CHHHHHHHH
Confidence 58898 79999999999887766 68877753 344444443
No 468
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=63.94 E-value=7.3 Score=34.23 Aligned_cols=32 Identities=25% Similarity=0.417 Sum_probs=27.1
Q ss_pred eeEEEEc-CChHHHHHHHHHH-cCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVAL-QRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~-~~~~~~vvaind~ 39 (250)
|+|-|.| +|.||+.+++.|. +++ .+|+++...
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g-~~V~~~~r~ 36 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTN-HSVVIVDSL 36 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-CEEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCC-CEEEEEecC
Confidence 4899999 9999999999998 776 788877543
No 469
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=63.48 E-value=22 Score=32.85 Aligned_cols=82 Identities=18% Similarity=0.132 Sum_probs=53.4
Q ss_pred eeEEEEcC----ChHHHHHHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEE
Q 025639 7 IKIGINGF----GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (250)
Q Consensus 7 ~kVaI~G~----G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~ 82 (250)
.+|+|+|. +++|+.+++.|.+.+..+|..||-- ++. +.|. +++
T Consensus 9 ~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~------------~~~-------------------i~G~--~~y 55 (457)
T 2csu_A 9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIK------------EEE-------------------VQGV--KAY 55 (457)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSS------------CSE-------------------ETTE--ECB
T ss_pred CeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCC------------CCe-------------------ECCE--ecc
Confidence 57999994 4889999999987644677667621 111 1221 233
Q ss_pred ecCCCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCCCEEEE
Q 025639 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVI 126 (250)
Q Consensus 83 ~~~~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Gak~vvi 126 (250)
. +.++++- .+|+++-+++.....+..+...+.|+|.+++
T Consensus 56 ~--sl~~lp~---~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 56 K--SVKDIPD---EIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp S--STTSCSS---CCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred C--CHHHcCC---CCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 2 3455542 5788888887766667777777888886554
No 470
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=63.42 E-value=9.6 Score=30.97 Aligned_cols=37 Identities=22% Similarity=0.227 Sum_probs=28.1
Q ss_pred CCCCCc-eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 1 MAGDKK-IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 1 ~~~~m~-~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|..+|+ .++-|-| +|-||+.+++.|.++. .+|+.+..
T Consensus 1 m~~~~~~~~vlVTGasggiG~~~a~~l~~~G-~~V~~~~r 39 (244)
T 1cyd_A 1 MKLNFSGLRALVTGAGKGIGRDTVKALHASG-AKVVAVTR 39 (244)
T ss_dssp --CCCTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CccCCCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeC
Confidence 334442 5799999 9999999999999886 67777654
No 471
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=63.35 E-value=7 Score=33.78 Aligned_cols=30 Identities=13% Similarity=0.179 Sum_probs=25.1
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvain 37 (250)
-+|.|.| .|.||+.+++++.... .+++++.
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~ 172 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKALG-AKLIGTV 172 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEe
Confidence 3799999 8999999999988776 5777764
No 472
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=62.99 E-value=6.4 Score=37.05 Aligned_cols=31 Identities=29% Similarity=0.349 Sum_probs=27.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.++.|.|+|++|+.+++.|.+.. .+++.|..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g-~~v~vid~ 379 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKP-VPFILIDR 379 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHCC-CCEEEEEC
Confidence 47999999999999999999875 88888864
No 473
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=62.94 E-value=10 Score=33.30 Aligned_cols=29 Identities=7% Similarity=0.096 Sum_probs=24.9
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEee
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvain 37 (250)
+|.|.| .|.||+.+++++.... .+++++.
T Consensus 165 ~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~ 194 (354)
T 2j8z_A 165 YVLIHAGLSGVGTAAIQLTRMAG-AIPLVTA 194 (354)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEECCccHHHHHHHHHHHHcC-CEEEEEe
Confidence 699999 9999999999988876 6777765
No 474
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=62.67 E-value=8.4 Score=33.81 Aligned_cols=32 Identities=22% Similarity=0.176 Sum_probs=28.1
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|+ ||+|+|-|.-|+.+++++.+.. +++++++.
T Consensus 1 MK-~I~ilGgg~~g~~~~~~Ak~~G-~~vv~vd~ 32 (363)
T 4ffl_A 1 MK-TICLVGGKLQGFEAAYLSKKAG-MKVVLVDK 32 (363)
T ss_dssp CC-EEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CC-EEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 64 8999999999999999988887 99999853
No 475
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=62.38 E-value=24 Score=32.76 Aligned_cols=83 Identities=19% Similarity=0.210 Sum_probs=49.8
Q ss_pred eeEEEEcCChHHHH-HHHHHHcCCCceEEEeeCCCCChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 7 IKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 7 ~kVaI~G~G~IGr~-~lr~l~~~~~~~vvaind~~~~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
.||.|+|.|..|.. +++.|.++. .+|.+ .|.. .......|-+ . + + +++...
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G-~~V~~-~D~~-~~~~~~~l~~---------------~-g--i-------~~~~g~ 74 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG-YQISG-SDLA-PNSVTQHLTA---------------L-G--A-------QIYFHH 74 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT-CEEEE-ECSS-CCHHHHHHHH---------------T-T--C-------EEESSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC-CeEEE-EECC-CCHHHHHHHH---------------C-C--C-------EEECCC
Confidence 48999999999996 899999887 77554 4541 2211122210 0 1 1 112122
Q ss_pred CCCCCCcccCCccEEEeecCCCCCHHHHHHHHHCCC
Q 025639 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGA 121 (250)
Q Consensus 86 ~p~~i~w~~~~vdiV~~~tg~~~~~~~a~~~~~~Ga 121 (250)
+++++. ++|+|+-+.|.-.+......+.+.|.
T Consensus 75 ~~~~~~----~~d~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 75 RPENVL----DASVVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp CGGGGT----TCSEEEECTTSCTTCHHHHHHHHTTC
T ss_pred CHHHcC----CCCEEEECCCCCCCCHHHHHHHHCCC
Confidence 444443 68999988887665555555666675
No 476
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=62.29 E-value=7.6 Score=35.72 Aligned_cols=31 Identities=26% Similarity=0.170 Sum_probs=25.5
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
.||+|+|+|++|+.+++.+.... .+|++. |.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~-D~ 221 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLG-AVVSAT-DV 221 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CEEEEE-cC
Confidence 58999999999999999998776 676554 44
No 477
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=61.98 E-value=6.9 Score=34.60 Aligned_cols=30 Identities=10% Similarity=0.295 Sum_probs=25.3
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+|.|.| .|.||...++++.... .+++++..
T Consensus 166 ~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~ 196 (362)
T 2c0c_A 166 KVLVTAAAGGTGQFAMQLSKKAK-CHVIGTCS 196 (362)
T ss_dssp EEEETTTTBTTHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHhCC-CEEEEEEC
Confidence 799999 8999999999988776 57777653
No 478
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=61.63 E-value=9.1 Score=32.75 Aligned_cols=32 Identities=25% Similarity=0.423 Sum_probs=26.2
Q ss_pred eeEEEEc-CChHHHHHHHHHHcC-C-C---ceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQR-D-D---VELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~-~-~---~~vvaind 38 (250)
|||.|.| +|.||+.+++.|.++ . . .+|+++..
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r 38 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS 38 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEEC
Confidence 3799999 999999999999874 2 3 78887754
No 479
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=61.52 E-value=9.3 Score=33.41 Aligned_cols=30 Identities=7% Similarity=0.140 Sum_probs=23.6
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
+|-|.| .|.||...++++.... .+++++..
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~G-a~Vi~~~~ 197 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEG-FRPIVTVR 197 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 466664 9999999999888776 68887753
No 480
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=61.37 E-value=9.6 Score=34.37 Aligned_cols=33 Identities=36% Similarity=0.391 Sum_probs=28.2
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++||.|.|.|..|+.+++++.+.. ++++++...
T Consensus 19 ~~~ili~g~g~~g~~~~~a~~~~G-~~v~~v~~~ 51 (433)
T 2dwc_A 19 AQKILLLGSGELGKEIAIEAQRLG-VEVVAVDRY 51 (433)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 469999999999999999998876 888888643
No 481
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=60.87 E-value=11 Score=33.14 Aligned_cols=32 Identities=28% Similarity=0.424 Sum_probs=27.7
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
++||.|.|.|..|+.+++++.+.. ++++.+..
T Consensus 11 ~~~ili~g~g~~~~~~~~a~~~~G-~~v~~~~~ 42 (391)
T 1kjq_A 11 ATRVMLLGSGELGKEVAIECQRLG-VEVIAVDR 42 (391)
T ss_dssp CCEEEEESCSHHHHHHHHHHHTTT-CEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC-CEEEEEEC
Confidence 479999999999999999998876 78888864
No 482
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=60.75 E-value=5.3 Score=36.52 Aligned_cols=37 Identities=22% Similarity=0.225 Sum_probs=30.1
Q ss_pred CCCCCceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 1 ~~~~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|...|+.||.|.|-|.++..+++++.+.+ +++++++.
T Consensus 1 m~~~~~k~ILI~g~g~~~~~i~~a~~~~G-~~vv~v~~ 37 (461)
T 2dzd_A 1 METRRIRKVLVANRGEIAIRVFRACTELG-IRTVAIYS 37 (461)
T ss_dssp --CCCCSEEEECSCHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred CCCCcCcEEEEECCcHHHHHHHHHHHHcC-CEEEEEEC
Confidence 66667679999999999999999998876 89888853
No 483
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=60.44 E-value=7 Score=37.18 Aligned_cols=30 Identities=23% Similarity=0.289 Sum_probs=24.5
Q ss_pred eeEEEEcCChHHHHHHHHHHcC------CCceEEEee
Q 025639 7 IKIGINGFGRIGRLVARVALQR------DDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~------~~~~vvain 37 (250)
.||||+|+|.+|+.+++.|.+. . ++++.-.
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G-~~ViVg~ 90 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKIGL 90 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCC-CEEEEEE
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCC-CEEEEEe
Confidence 4899999999999999998876 5 6765433
No 484
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=60.27 E-value=9.2 Score=32.36 Aligned_cols=30 Identities=13% Similarity=0.275 Sum_probs=25.8
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.||.|-| +|.||+.+++.|.+++ .+|+++.
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 32 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENG-YSVNTTI 32 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECChhHHHHHHHHHHHHCC-CEEEEEE
Confidence 3799999 9999999999999886 7877764
No 485
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=59.93 E-value=8.5 Score=33.87 Aligned_cols=33 Identities=24% Similarity=0.193 Sum_probs=24.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
+||+|.|.|.||..++-.|..++-+.-+.+-|.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 699999999999988888776653332333354
No 486
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=59.87 E-value=8 Score=31.86 Aligned_cols=30 Identities=23% Similarity=0.407 Sum_probs=25.0
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
||.|.| +|.||+.+++.|.+ . .+|+++...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g-~~V~~~~r~ 32 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-R-HEVIKVYNS 32 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-T-SCEEEEESS
T ss_pred EEEEECCCChhHHHHHHHHhc-C-CeEEEecCC
Confidence 799999 99999999999984 4 787777543
No 487
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=59.16 E-value=8.9 Score=33.62 Aligned_cols=31 Identities=19% Similarity=0.381 Sum_probs=27.0
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.||+|.|-|..|+.+++++.+.. ++++.+..
T Consensus 2 ~~Ililg~g~~~~~~~~a~~~~G-~~v~~~~~ 32 (365)
T 2z04_A 2 LTVGILGGGQLGWMTILEGRKLG-FKFHVLED 32 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 48999999999999999998876 88888863
No 488
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=58.96 E-value=12 Score=30.95 Aligned_cols=33 Identities=18% Similarity=0.066 Sum_probs=27.4
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|+.+|.|+|-|..|-..+..|.++. ++++-+..
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie~ 33 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRAR-KNILLVDA 33 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC-CCEEEEeC
Confidence 6689999999999999999888776 67766753
No 489
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=58.75 E-value=10 Score=34.03 Aligned_cols=32 Identities=9% Similarity=0.060 Sum_probs=27.0
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++|-|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 70 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~R~ 102 (427)
T 4f6c_A 70 GNTLLTGATGFLGAYLIEALQGYS-HRIYCFIRA 102 (427)
T ss_dssp EEEEEECTTSHHHHHHHHHHTTTE-EEEEEEEEC
T ss_pred CEEEEecCCcHHHHHHHHHHHcCC-CEEEEEECC
Confidence 5899999 9999999999997665 788777654
No 490
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=58.68 E-value=11 Score=32.81 Aligned_cols=30 Identities=30% Similarity=0.348 Sum_probs=23.4
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCC-ceEEEe
Q 025639 7 IKIGING-FGRIGRLVARVALQRDD-VELVAV 36 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~-~~vvai 36 (250)
|||+|.| .|.||+.++..|..++. .+++-+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~ 32 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFV 32 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEE
Confidence 4899999 99999999988877653 245544
No 491
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=58.45 E-value=8.7 Score=36.11 Aligned_cols=38 Identities=29% Similarity=0.267 Sum_probs=30.4
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCCChhHH
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYM 46 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~~~~~~ 46 (250)
++.+|-|.|+|++|+.+++.|.+.. .+++.|.. +++.+
T Consensus 126 ~~~hviI~G~g~~g~~la~~L~~~~-~~vvvid~---~~~~~ 163 (565)
T 4gx0_A 126 TRGHILIFGIDPITRTLIRKLESRN-HLFVVVTD---NYDQA 163 (565)
T ss_dssp CCSCEEEESCCHHHHHHHHHTTTTT-CCEEEEES---CHHHH
T ss_pred cCCeEEEECCChHHHHHHHHHHHCC-CCEEEEEC---CHHHH
Confidence 4568999999999999999998775 78888864 45543
No 492
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=58.19 E-value=7.9 Score=33.23 Aligned_cols=32 Identities=19% Similarity=0.388 Sum_probs=26.2
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCC------ceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDD------VELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~------~~vvaind 38 (250)
++|.|-| +|.||+.+++.|.+++. .+|+++..
T Consensus 15 ~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r 53 (342)
T 2hrz_A 15 MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDV 53 (342)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEc
Confidence 6899999 99999999999988753 57766654
No 493
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=58.17 E-value=9.1 Score=30.96 Aligned_cols=31 Identities=19% Similarity=0.206 Sum_probs=25.7
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEeeC
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.++-|.| +|-||+.+++.|.++. .+++.+..
T Consensus 3 k~vlVtGasggiG~~la~~l~~~G-~~V~~~~r 34 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKARG-YRVVVLDL 34 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-CEEEEEcc
Confidence 5789999 9999999999998876 67766643
No 494
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=57.82 E-value=9.8 Score=32.32 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=26.9
Q ss_pred CceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 5 m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
|+.+|.|+|-|.+|-.++..|.++. ++++.+..
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G-~~V~vlE~ 33 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAG-HQVHLFDK 33 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT-CCEEEECS
T ss_pred CCceEEEECCcHHHHHHHHHHHHCC-CcEEEEEC
Confidence 4568999999999999999998876 77776754
No 495
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=57.81 E-value=11 Score=32.85 Aligned_cols=31 Identities=29% Similarity=0.424 Sum_probs=23.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCC-ceEEEee
Q 025639 7 IKIGING-FGRIGRLVARVALQRDD-VELVAVN 37 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~-~~vvain 37 (250)
|||+|.| .|.||+.++..|..++. .+++-+.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~D 33 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIG 33 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEc
Confidence 4899999 59999999998887653 3455443
No 496
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=57.77 E-value=6.7 Score=34.21 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=24.9
Q ss_pred eEEEEc-CChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 8 KIGING-FGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 8 kVaI~G-~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
+|.|.| .|.||...++++.... .+++++...
T Consensus 147 ~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~ 178 (340)
T 3gms_A 147 VLLVNACGSAIGHLFAQLSQILN-FRLIAVTRN 178 (340)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHT-CEEEEEESS
T ss_pred EEEEeCCccHHHHHHHHHHHHcC-CEEEEEeCC
Confidence 799999 5599999999888776 688777543
No 497
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=57.66 E-value=15 Score=30.60 Aligned_cols=34 Identities=15% Similarity=0.196 Sum_probs=27.8
Q ss_pred CCceeEEEEcCChHHHHHHHHHHcCCCceEEEeeC
Q 025639 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (250)
Q Consensus 4 ~m~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind 38 (250)
.|+.+|.|+|.|..|-..+..|.++. ++++-+..
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie~ 46 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSARYM-LKTLVIGE 46 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCccCEEEECccHHHHHHHHHHHHCC-CcEEEEec
Confidence 35679999999999999988888875 77766754
No 498
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=57.62 E-value=9.6 Score=33.67 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=24.5
Q ss_pred ceeEEEEcCChHHHHHHHHHHcCCCceEEEeeCC
Q 025639 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (250)
Q Consensus 6 ~~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~ 39 (250)
++||+|.|.|.||..++-.|..++-+.-+.+-|.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 4799999999999998888776653332333354
No 499
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=57.22 E-value=8.2 Score=32.23 Aligned_cols=30 Identities=17% Similarity=0.271 Sum_probs=24.6
Q ss_pred eeEEEEc-CChHHHHHHHHHHcCCCceEEEee
Q 025639 7 IKIGING-FGRIGRLVARVALQRDDVELVAVN 37 (250)
Q Consensus 7 ~kVaI~G-~G~IGr~~lr~l~~~~~~~vvain 37 (250)
.+|-|-| +|-||+.+++.|.++. .+|+.+.
T Consensus 4 k~vlVTGasg~IG~~la~~L~~~G-~~V~~~~ 34 (267)
T 3rft_A 4 KRLLVTGAAGQLGRVMRERLAPMA-EILRLAD 34 (267)
T ss_dssp EEEEEESTTSHHHHHHHHHTGGGE-EEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcC-CEEEEEe
Confidence 4689999 9999999999998876 6665554
No 500
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=56.54 E-value=24 Score=32.23 Aligned_cols=90 Identities=14% Similarity=0.181 Sum_probs=52.4
Q ss_pred eeEEEEcCChHHHHHHHHHHcCCCceEEEeeCCCC-ChhHHhhhhccccccccCCCcceEEeCCeeeEECCEEEEEEecC
Q 025639 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFI-STDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (250)
Q Consensus 7 ~kVaI~G~G~IGr~~lr~l~~~~~~~vvaind~~~-~~~~~a~ll~ydS~~G~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 85 (250)
.||.|+|.|..|...++.|.++. .+|.+...-.. .+.....|- .. + + + +....
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G-~~V~~~D~~~~~~~~~~~~L~---------------~~-g--i-----~--~~~g~ 63 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG-AIVTVNDGKPFDENPTAQSLL---------------EE-G--I-----K--VVCGS 63 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT-CEEEEEESSCGGGCHHHHHHH---------------HT-T--C-----E--EEESC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEEeCCcccCChHHHHHH---------------hC-C--C-----E--EEECC
Confidence 58999999999999999999887 77655543200 011111110 01 1 1 1 11122
Q ss_pred CCCCCCcccCC-ccEEEeecCCCCCHHHHHHHHHCCCCEEEEe
Q 025639 86 NPEEIPWAKTG-AEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (250)
Q Consensus 86 ~p~~i~w~~~~-vdiV~~~tg~~~~~~~a~~~~~~Gak~vvis 127 (250)
+++++ +. + +|+|+-+.|.-.+......+.+.|. -|++
T Consensus 64 ~~~~~-~~--~~~d~vv~spgi~~~~p~~~~a~~~gi--~v~~ 101 (451)
T 3lk7_A 64 HPLEL-LD--EDFCYMIKNPGIPYNNPMVKKALEKQI--PVLT 101 (451)
T ss_dssp CCGGG-GG--SCEEEEEECTTSCTTSHHHHHHHHTTC--CEEC
T ss_pred ChHHh-hc--CCCCEEEECCcCCCCChhHHHHHHCCC--cEEe
Confidence 34322 11 4 8999999988666655566667776 3453
Done!