BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025640
(250 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81148|PSA4_ARATH Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1
PE=1 SV=1
Length = 250
Score = 484 bits (1247), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/250 (92%), Positives = 242/250 (96%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVL+GEKKVTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTST 60
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
S EKMYKIDDHVACAVAGIMSDANILINTARVQAQRYT+ YQEPMPVEQLVQSLCDTKQG
Sbjct: 61 SAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQG 120
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQFGGLRPFGVSFLFAGWDK++GFQLYMSDPSGNYGGWKAAA+GANNQAAQSILKQDYK
Sbjct: 121 YTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYK 180
Query: 181 DDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKH 240
DD +REEAV+LALKVL+KTMDSTSLTS+KLELAEV+L PS VKY V SPE+L+KLLVKH
Sbjct: 181 DDATREEAVELALKVLTKTMDSTSLTSEKLELAEVYLTPSKTVKYHVHSPESLTKLLVKH 240
Query: 241 GVTQPAAETS 250
GVTQPAAETS
Sbjct: 241 GVTQPAAETS 250
>sp|P52427|PSA4_SPIOL Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2
SV=1
Length = 250
Score = 484 bits (1246), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/250 (91%), Positives = 245/250 (98%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGIL+KDGVVL+GEKKVTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLIGEKKVTSKLLQTST 60
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYT++YQEPMPVEQLVQSLCDTKQG
Sbjct: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQG 120
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKA AIGANNQAAQS+LKQDYK
Sbjct: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYK 180
Query: 181 DDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKH 240
DD++RE+AV+LALK LSKTMDSTSLTS+KLELAEV+L+PSGKVKYQV SPE+L++LL +
Sbjct: 181 DDVTREDAVKLALKALSKTMDSTSLTSEKLELAEVYLLPSGKVKYQVHSPESLNRLLTES 240
Query: 241 GVTQPAAETS 250
G+TQPAAETS
Sbjct: 241 GLTQPAAETS 250
>sp|O82530|PSA4_PETHY Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2
SV=1
Length = 249
Score = 471 bits (1212), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/250 (90%), Positives = 240/250 (96%), Gaps = 1/250 (0%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGI SKDGVVLVGEKKVTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGISSKDGVVLVGEKKVTSKLLQTST 60
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
S+EKMYKIDDHVACAVAGIMSDANILINTARVQAQRYT++YQEPMPVEQLVQSLCDTKQG
Sbjct: 61 SSEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQG 120
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQ+GGL PFGVSFLFAGWDKN+GFQL+MSDPSGNY GWKAAAIGANNQAAQS+LKQDYK
Sbjct: 121 YTQYGGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYK 180
Query: 181 DDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKH 240
DDI+REEAVQLALKVLSKTMDSTSLTS+KLELAEVFL +GKVKYQ CSPE L+ +LVK
Sbjct: 181 DDITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFL-SNGKVKYQACSPEKLNSMLVKS 239
Query: 241 GVTQPAAETS 250
G+TQP+AE S
Sbjct: 240 GLTQPSAEES 249
>sp|Q5VRG3|PSA4B_ORYSJ Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. japonica
GN=Os06g0167600 PE=2 SV=1
Length = 250
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/249 (83%), Positives = 233/249 (93%), Gaps = 1/249 (0%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSA+G+L+ DGVVLVGEKKVTSKLLQTS
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSR 60
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
S EKMYKID H+ACAVAGIMSDANIL+NTAR+ AQRY +YQEP+PVEQLVQSLCDTKQG
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQG 120
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQFGGLRPFGVSFLFAGWDK++GFQLYMSDPSGNY GWKAAA+GAN+QAAQS+LKQDY+
Sbjct: 121 YTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYR 180
Query: 181 DDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMP-SGKVKYQVCSPEALSKLLVK 239
D ++REEAV LALKVLSKTMDSTSLT++KLELAEVFL P +G+V+YQVCSPEA+ KLL K
Sbjct: 181 DGLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLLAK 240
Query: 240 HGVTQPAAE 248
G++QPA E
Sbjct: 241 AGLSQPAPE 249
>sp|P0C8Y9|PSA4B_ORYSI Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. indica
GN=OsI_021067 PE=1 SV=1
Length = 250
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/249 (83%), Positives = 233/249 (93%), Gaps = 1/249 (0%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSA+G+L+ DGVVLVGEKKVTSKLLQTS
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSR 60
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
S EKMYKID H+ACAVAGIMSDANIL+NTAR+ AQRY +YQEP+PVEQLVQSLCDTKQG
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQG 120
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQFGGLRPFGVSFLFAGWDK++GFQLYMSDPSGNY GWKAAA+GAN+QAAQS+LKQDY+
Sbjct: 121 YTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYR 180
Query: 181 DDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMP-SGKVKYQVCSPEALSKLLVK 239
D ++REEAV LALKVLSKTMDSTSLT++KLELAEVFL P +G+V+YQVCSPEA+ KLL K
Sbjct: 181 DGLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLLAK 240
Query: 240 HGVTQPAAE 248
G++QPA E
Sbjct: 241 AGLSQPAPE 249
>sp|P0C1G8|PSA4A_ORYSJ Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. japonica
GN=PAC1 PE=2 SV=1
Length = 250
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/249 (83%), Positives = 233/249 (93%), Gaps = 1/249 (0%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSA+G+L+ DGVVLVGEKKVTSKLLQTS
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSR 60
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
S EKMYKID H+ACAVAGIMSDANIL+NTAR+ AQRY +YQEP+PVEQLVQSLCDTKQG
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQG 120
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQFGGLRPFGVSFLFAGWDK++GFQLYMSDPSGNY GWKAAA+GAN+QAAQS+LKQDY+
Sbjct: 121 YTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYR 180
Query: 181 DDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMP-SGKVKYQVCSPEALSKLLVK 239
D ++REEAV LALKVLSKTMDSTSLT++KLELAEVFL P +G+V+YQVCSPEA+ KLL K
Sbjct: 181 DGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLLAK 240
Query: 240 HGVTQPAAE 248
G++QPA E
Sbjct: 241 AGLSQPAPE 249
>sp|A2Y9X7|PSA4A_ORYSI Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. indica
GN=OsI_021120 PE=1 SV=2
Length = 250
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/249 (83%), Positives = 233/249 (93%), Gaps = 1/249 (0%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSA+G+L+ DGVVLVGEKKVTSKLLQTS
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSR 60
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
S EKMYKID H+ACAVAGIMSDANIL+NTAR+ AQRY +YQEP+PVEQLVQSLCDTKQG
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQG 120
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQFGGLRPFGVSFLFAGWDK++GFQLYMSDPSGNY GWKAAA+GAN+QAAQS+LKQDY+
Sbjct: 121 YTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYR 180
Query: 181 DDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMP-SGKVKYQVCSPEALSKLLVK 239
D ++REEAV LALKVLSKTMDSTSLT++KLELAEVFL P +G+V+YQVCSPEA+ KLL K
Sbjct: 181 DGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLLAK 240
Query: 240 HGVTQPAAE 248
G++QPA E
Sbjct: 241 AGLSQPAPE 249
>sp|P34119|PSA4_DICDI Proteasome subunit alpha type-4 OS=Dictyostelium discoideum
GN=psmA4 PE=2 SV=1
Length = 250
Score = 332 bits (851), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/246 (63%), Positives = 196/246 (79%), Gaps = 3/246 (1%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
M+RRYD RTTIFSPEGR+YQVEYAM AI +AG+ +GIL+KDG+VL EKK T+KLL +ST
Sbjct: 1 MARRYDQRTTIFSPEGRVYQVEYAMTAIRHAGATVGILAKDGIVLAAEKKTTAKLLDSST 60
Query: 61 S-TEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQ 119
S +EKM+KID+HV CAVAGI SDANILIN AR+ +QR+ Y YQEPMPVEQLV +CDTKQ
Sbjct: 61 SISEKMFKIDEHVVCAVAGITSDANILINYARLSSQRFFYQYQEPMPVEQLVSQICDTKQ 120
Query: 120 GYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGA-NNQAAQSILKQD 178
GYTQ+GGLRPFGVSFL+AGWD++YGFQLY SDPSGN+ GWKA +IG N+Q AQS+L+ +
Sbjct: 121 GYTQYGGLRPFGVSFLYAGWDRHYGFQLYQSDPSGNFAGWKATSIGGENSQVAQSVLRSN 180
Query: 179 YKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLV 238
YK DIS +EA+QLALKVL+KTMD +++ S+KLE + F V Y + + L +
Sbjct: 181 YKPDISLKEALQLALKVLTKTMDRSNINSEKLEFS-YFTKQGDNVVYHIFTAAELDAFIK 239
Query: 239 KHGVTQ 244
+ + Q
Sbjct: 240 ETDLEQ 245
>sp|P23638|PSA3_YEAST Proteasome subunit alpha type-3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRE9 PE=1 SV=1
Length = 258
Score = 316 bits (809), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 147/244 (60%), Positives = 193/244 (79%), Gaps = 1/244 (0%)
Query: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTS 61
SRRYDSRTTIFSPEGRLYQVEYA+E+I +AG+AIGI++ DG+VL E+KVTS LL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTS 62
Query: 62 TEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGY 121
TEK+YK++D +A AVAG+ +DA ILINTAR+ AQ Y Y E +PVE LV+ L D KQGY
Sbjct: 63 TEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGY 122
Query: 122 TQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKD 181
TQ GGLRPFGVSF++AG+D YG+QLY S+PSGNY GWKA ++GAN AAQ++L+ DYKD
Sbjct: 123 TQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKD 182
Query: 182 DISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPS-GKVKYQVCSPEALSKLLVKH 240
D+ ++A++LALK LSKT DS++LT D+LE A + + G+V ++ P+ + +LVK
Sbjct: 183 DMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDILVKT 242
Query: 241 GVTQ 244
G+T+
Sbjct: 243 GITK 246
>sp|Q9R1P0|PSA4_MOUSE Proteasome subunit alpha type-4 OS=Mus musculus GN=Psma4 PE=1 SV=1
Length = 261
Score = 300 bits (767), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 143/238 (60%), Positives = 184/238 (77%), Gaps = 2/238 (0%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
MSRRYDSRTTIFSPEGRLYQVEYAMEAIG+AG+ +GIL+ DGV+L E++ KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
+EK+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA 120
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQFGG RPFGVS L+ GWDK+YGFQLY SDPSGNYGGWKA IG N+ AA S+LKQDYK
Sbjct: 121 YTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYK 180
Query: 181 D-DISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 237
+ +++ + A+ LA+KVL+KTMD + L+++K+E+A SGK +V + + +L+
Sbjct: 181 EGEMTLKSALALAVKVLNKTMDVSKLSAEKVEIA-TLTRESGKTVIRVLKQKEVEQLI 237
>sp|P25789|PSA4_HUMAN Proteasome subunit alpha type-4 OS=Homo sapiens GN=PSMA4 PE=1 SV=1
Length = 261
Score = 299 bits (765), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/238 (59%), Positives = 184/238 (77%), Gaps = 2/238 (0%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
MSRRYDSRTTIFSPEGRLYQVEYAMEAIG+AG+ +GIL+ DGV+L E++ KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
+EK+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA 120
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQFGG RPFGVS L+ GWDK+YGFQLY SDPSGNYGGWKA IG N+ AA S+LKQDYK
Sbjct: 121 YTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYK 180
Query: 181 D-DISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 237
+ +++ + A+ LA+KVL+KTMD + L+++K+E+A +GK +V + + +L+
Sbjct: 181 EGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQLI 237
>sp|Q3ZCK9|PSA4_BOVIN Proteasome subunit alpha type-4 OS=Bos taurus GN=PSMA4 PE=1 SV=1
Length = 261
Score = 299 bits (765), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/238 (59%), Positives = 184/238 (77%), Gaps = 2/238 (0%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
MSRRYDSRTTIFSPEGRLYQVEYAMEAIG+AG+ +GIL+ DGV+L E++ KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
+EK+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA 120
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQFGG RPFGVS L+ GWDK+YGFQLY SDPSGNYGGWKA IG N+ AA S+LKQDYK
Sbjct: 121 YTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYK 180
Query: 181 D-DISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 237
+ +++ + A+ LA+KVL+KTMD + L+++K+E+A +GK +V + + +L+
Sbjct: 181 EGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQLI 237
>sp|P21670|PSA4_RAT Proteasome subunit alpha type-4 OS=Rattus norvegicus GN=Psma4 PE=1
SV=1
Length = 261
Score = 298 bits (764), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/238 (59%), Positives = 184/238 (77%), Gaps = 2/238 (0%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
MSRRYDSRTTIFSPEGRLYQVEYAMEAIG+AG+ +GIL+ DGV+L E++ KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
+EK+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA 120
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQFGG RPFGVS L+ GWDK+YGFQLY SDPSGNYGGWKA IG N+ AA S+LKQDYK
Sbjct: 121 YTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYK 180
Query: 181 D-DISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 237
+ +++ + A+ LA+KVL+KTMD + L+++K+E+A +GK +V + + +L+
Sbjct: 181 EGEMTLKSALALAVKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQLI 237
>sp|Q09682|PSA3_SCHPO Probable proteasome subunit alpha type-3 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC13C5.01c PE=3
SV=1
Length = 248
Score = 298 bits (764), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 141/245 (57%), Positives = 187/245 (76%), Gaps = 1/245 (0%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
MSR YDSRTTIFSPEGRLYQVEYA+EAI +AG A+GI++KDG+VL EKKVTSKLL+
Sbjct: 1 MSRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEE 60
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
S EK+Y I D++ CAVAG+ +DANILIN AR Q+Y + E MP EQLV+ +CD KQG
Sbjct: 61 SAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQG 120
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQ+GGLRPFGVSFL+AGWD G+QL+ S+PSGNYG W+A +IG N+ + QS+++Q+YK
Sbjct: 121 YTQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYK 180
Query: 181 DDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFL-MPSGKVKYQVCSPEALSKLLVK 239
DDI+ +EA +A+K LSKT+DS SLT +K+E A + K+ ++ + ++++L K
Sbjct: 181 DDINLDEASAMAVKFLSKTLDSNSLTHEKIEFATITKDTTKNKMVCKIWKSDEINEVLNK 240
Query: 240 HGVTQ 244
+ TQ
Sbjct: 241 YQETQ 245
>sp|Q4R932|PSA4_MACFA Proteasome subunit alpha type-4 OS=Macaca fascicularis GN=PSMA4
PE=2 SV=1
Length = 261
Score = 298 bits (762), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 141/238 (59%), Positives = 184/238 (77%), Gaps = 2/238 (0%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
MSRRYDSRTTIFSPEGRLYQVEYAMEAIG+AG+ +GIL+ DGV+L E++ KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
+EK+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA 120
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQFGG RPFGVS L+ GWDK+YGFQLY SDP+GNYGGWKA IG N+ AA S+LKQDYK
Sbjct: 121 YTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPNGNYGGWKATCIGNNSAAAVSMLKQDYK 180
Query: 181 D-DISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 237
+ +++ + A+ LA+KVL+KTMD + L+++K+E+A +GK +V + + +L+
Sbjct: 181 EGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQLI 237
>sp|Q9N599|PSA4_CAEEL Proteasome subunit alpha type-4 OS=Caenorhabditis elegans GN=pas-3
PE=3 SV=2
Length = 250
Score = 282 bits (721), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/213 (63%), Positives = 167/213 (78%), Gaps = 2/213 (0%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
M+RRYDSRTTIFSPEGRLYQVEYAMEAI +AG+ +GILS +G+V+ E+K KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSV 60
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
TEK+Y++ D+++C VAGI +DANILIN R A Y +Y E MPVEQLVQ+LC+ KQ
Sbjct: 61 MTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQR 120
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQ GG RPFGVS L+ GWDK+YG+QLY SDPSGNY GWKA IG+N+QAA ++LKQ+YK
Sbjct: 121 YTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYK 180
Query: 181 DDISREEAVQLALKVLSKTMDSTSLTSDKLELA 213
+ EEA QLA+KVL KT+D L S+K+E+A
Sbjct: 181 SP-NLEEAKQLAIKVLWKTLD-VKLASEKVEMA 211
>sp|P18053|PSA4_DROME Proteasome subunit alpha type-4 OS=Drosophila melanogaster
GN=Pros29 PE=1 SV=2
Length = 264
Score = 277 bits (709), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 134/244 (54%), Positives = 179/244 (73%), Gaps = 5/244 (2%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
M+RRYDSRTTIFSPEGRLYQVEYAMEAI +AG+ +GIL++DG++L E + T+KLL ++
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAI 60
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
+EK+Y+++D++ C+VAGI SDAN+L + R+ AQRY ++Y E +P EQLV LCD KQ
Sbjct: 61 PSEKIYRLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQA 120
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQ+GG RPFGVS L+ GWD YG+QLY SDPSGNYGGWKA IG N AA S+LKQ+
Sbjct: 121 YTQYGGKRPFGVSLLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELA 180
Query: 181 D----DISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKL 236
D ++ +A LA+KVLS T+D+T LT +K+E+A + + K Y V + KL
Sbjct: 181 DKENVKLTLADAKDLAIKVLSMTLDTTKLTPEKVEMATLQRV-DNKTVYSVLEKPDVEKL 239
Query: 237 LVKH 240
+ K+
Sbjct: 240 IEKY 243
>sp|Q9VA12|PSA4L_DROME Proteasome subunit alpha type-4-like OS=Drosophila melanogaster
GN=Prosalpha3T PE=2 SV=1
Length = 251
Score = 232 bits (591), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/219 (51%), Positives = 153/219 (69%), Gaps = 5/219 (2%)
Query: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
M+R +DSRTTIFSPEGRLYQVEYAMEA +G+ +G+L+K+GV+L E+ V KL+ TS
Sbjct: 1 MARFFDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSV-DKLMDTSI 59
Query: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQG 120
++ +++++AC G +D N+L+N R+ AQ+Y + + E +P EQLV +LCD KQ
Sbjct: 60 PVPRISWLNENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQA 119
Query: 121 YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYK 180
YTQ+GG RPFGVSFL+ GWD +GFQLY SDPSGNY GWKA IG + AA +L+++
Sbjct: 120 YTQYGGKRPFGVSFLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELF 179
Query: 181 D----DISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 215
S EEA +A+KV+ T+ SLT +KLE+A V
Sbjct: 180 SKGYVSPSVEEAKDVAIKVMGMTLGRDSLTPEKLEIAFV 218
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 214 bits (544), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 159/233 (68%), Gaps = 8/233 (3%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD T+FSP+GRL+QV+YA EA+ +A+G+ KDGVVL EK+VTSKL++ S EK
Sbjct: 10 YDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPE-SYEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+++IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+
Sbjct: 69 IFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQY 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFG + L AG N +L+ +DPSG Y WKA AIG+ A +I ++ Y+D+++
Sbjct: 129 GGVRPFGAALLMAGV--NEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDEMT 186
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 237
EEA++LA+ LSK M+ S S EV ++ + K++ +PE ++K L
Sbjct: 187 LEEAIKLAVLALSKIMEEPSPES-----IEVAVISVKEKKFKKITPEEVAKCL 234
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 149/211 (70%), Gaps = 5/211 (2%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD T+FSP+GRL+QV YA EA+ +A+G+ +GVVL EK++TS+L++ S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPD-SYEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+++IDDH+A A +GI++DA +L+N AR++AQ Y Y EP PV +V+ +CD KQ +TQ+
Sbjct: 69 IFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQY 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFG + L AG N +LY +DPSG Y WKA AIG+ A +I ++ Y+DD++
Sbjct: 129 GGVRPFGAALLMAGI--NDRPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDDMN 186
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEV 215
E+A++LAL L+KTM++ S +D +E+A +
Sbjct: 187 LEDAIKLALMALAKTMENPS--ADNIEVAVI 215
>sp|Q9V122|PSA_PYRAB Proteasome subunit alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=psmA PE=3 SV=1
Length = 260
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 154/233 (66%), Gaps = 8/233 (3%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD T+FSP+GRL+QV YA EA+ +A+G+ KDGVVL EK++TS+L++ S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPE-SYEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+++IDDH+A A +GI++DA +L+N AR++AQ + Y EP P+ +V+ +CD KQ +TQ+
Sbjct: 69 IFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQY 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFG + L AG N +LY +DPSG Y WKA AIG+ A +I + Y+DD++
Sbjct: 129 GGVRPFGAALLMAGV--NDKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDMT 186
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 237
+EA++LA+ L+KTM+ S E EV ++ K++ S E + K L
Sbjct: 187 LDEAIKLAIFALAKTMEKPS-----AENIEVAVITVKDKKFRKLSKEEIEKFL 234
>sp|O59219|PSA_PYRHO Proteasome subunit alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=psmA PE=3 SV=1
Length = 260
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 154/233 (66%), Gaps = 8/233 (3%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD T+FSP+GRL+QV YA EA+ +A+G+ +GVVL EK++TS+L++ S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPE-SYEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+++IDDH+A A +GI++DA +L+N AR++AQ + Y EP P+ +V+ +CD KQ +TQ+
Sbjct: 69 IFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQY 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFG + L AG N +LY +DPSG Y WKA AIG+ A +I ++ YKDD+S
Sbjct: 129 GGVRPFGAALLMAGV--NEKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDMS 186
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 237
EEA++LA+ L+KTM+ S E EV ++ K++ S E + K L
Sbjct: 187 LEEAIKLAIFALAKTMEKPS-----AENIEVAIITVKDKKFRKLSREEIEKYL 234
>sp|O24733|PSA_THEK1 Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA
PE=3 SV=1
Length = 260
Score = 207 bits (526), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 150/211 (71%), Gaps = 5/211 (2%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD T+FSP+GRL+QV YA EA+ +A+G+ KDGVVL EK++TSKL++ S S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPS-SYEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
++ IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+
Sbjct: 69 IFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQY 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFG + L AG N +L+ +DPSG Y WKA AIG+ A +I ++ Y+DDI
Sbjct: 129 GGVRPFGAALLMAG--VNEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIG 186
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEV 215
+++A++LA+ L+KT++ T++ +E+A +
Sbjct: 187 KDDAIKLAILALAKTLEEP--TAEGIEVAYI 215
>sp|Q5JIU9|PSA_PYRKO Proteasome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=psmA PE=3 SV=1
Length = 260
Score = 207 bits (526), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 150/211 (71%), Gaps = 5/211 (2%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD T+FSP+GRL+QV YA EA+ +A+G+ KDGVVL EK++TSKL++ S S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPS-SYEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
++ IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+
Sbjct: 69 IFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQY 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFG + L AG N +L+ +DPSG Y WKA AIG+ A +I ++ Y+DDI
Sbjct: 129 GGVRPFGAALLMAG--VNEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIG 186
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEV 215
+++A++LA+ L+KT++ T++ +E+A +
Sbjct: 187 KDDAIKLAILALAKTLEEP--TAEGIEVAYI 215
>sp|Q60177|PSA_METJA Proteasome subunit alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=psmA PE=1 SV=1
Length = 261
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD T+FSPEGRLYQVEYA EA+ +AIGI KDGVVL ++++TSKL++ S EK
Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIR-SIEK 67
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+++IDDHVA A +G+++DA +LI+ AR++AQ Y Y E + +E L + +CD KQ YTQ
Sbjct: 68 IFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQH 127
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFGVS L AG DKN +L+ +DPSG +KA AIG+ +L+++Y+DDI+
Sbjct: 128 GGVRPFGVSLLIAGIDKNEA-RLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDIT 186
Query: 185 REEAVQLALKVLSK 198
+E ++LA+ L+K
Sbjct: 187 LDEGLELAITALTK 200
>sp|C5A2C2|PSA_THEGJ Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1
Length = 260
Score = 203 bits (517), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 147/213 (69%), Gaps = 5/213 (2%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD T+FSP+GRL+QV YA EA+ +A+G+ K GVVL EK++TS+L++ S S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPS-SYEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+++IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+
Sbjct: 69 IFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQY 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFG + L AG N +LY +DPSG Y WKA AIG+ A +I ++ Y DDI
Sbjct: 129 GGVRPFGAALLMAG--VNEKPELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDDID 186
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEVFL 217
E A++LA+ L+KT++ S S +E+A + L
Sbjct: 187 MEGAIKLAILALAKTLEEPSPES--IEVAYITL 217
>sp|B6YSH9|PSA_THEON Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1)
GN=psmA PE=3 SV=1
Length = 260
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 141/203 (69%), Gaps = 3/203 (1%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD T+FSP+GRL+QV YA EA+ +A+G+ K+GVVL EK++TSKL++ S S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPS-SYEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+++IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+
Sbjct: 69 IFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQY 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFG + L AG N +LY +DPSG Y W+A AIG+ A +I + Y DD+
Sbjct: 129 GGVRPFGAALLMAG--VNDKPELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDDLD 186
Query: 185 REEAVQLALKVLSKTMDSTSLTS 207
E A++LA+ L+KT++ S S
Sbjct: 187 MEGAIKLAILALAKTLEEPSPES 209
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 146/211 (69%), Gaps = 3/211 (1%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD T+FSP+GRL+QVEYA EA+ +A+GI ++GVVL +K+VTSKL++ S EK
Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPE-SIEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+Y+ID H+ A AG+++DA +L+ AR++AQ Y Y Y EP+ V+ LV+++CD KQ YTQ
Sbjct: 69 VYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQH 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFG + L AG D G +L+ +DPSG KA AIG Q A + +++Y++D++
Sbjct: 129 GGVRPFGTALLIAGVDTK-GCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYREDMT 187
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEV 215
+EA++LA++ L + + T+D LE+A V
Sbjct: 188 LQEAIELAVRALYEASREET-TADNLEIAVV 217
>sp|A4FZT6|PSA_METM5 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=psmA PE=3 SV=1
Length = 259
Score = 194 bits (492), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 148/227 (65%), Gaps = 6/227 (2%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD TIFSPEGRLYQVEYA EA+ +A+GI KDGVVL ++++TSKL+ S S EK
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVS-SIEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+++IDDH+ A +G+++DA +LI+ AR++AQ +Y E + VE L + +CD KQ YTQ
Sbjct: 69 IFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQH 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG RPFG++ L G D+ + +L+ +DPSG +KA AIG+ A +L+ Y +D++
Sbjct: 129 GGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSEDMT 187
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPE 231
E ++LAL LSKT + L + +++A + SGK+ ++ E
Sbjct: 188 VNEGMELALYALSKT--TEELKPENIDMA--IVKDSGKLVEKISVDE 230
>sp|O29760|PSA_ARCFU Proteasome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=psmA PE=1 SV=1
Length = 246
Score = 193 bits (491), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 143/211 (67%), Gaps = 4/211 (1%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD T+FSP+GRL+QVEYA EA+ +AIGI K+GV+L+ +K+V SKLL+ T EK
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADT-IEK 66
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+YKID+H+ A +G+++DA +LI+ AR++AQ Y EP+ V++L + +CD KQ YTQ+
Sbjct: 67 IYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQY 126
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFGVS L AG D+ +LY +DPSG +KA AIG A +++Y+DD+S
Sbjct: 127 GGVRPFGVSLLIAGVDEVP--KLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDDLS 184
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEV 215
++A+ L L + +++S L + +E+ V
Sbjct: 185 FDDAMVLGLVAMGLSIES-ELVPENIEVGYV 214
>sp|Q6M0L9|PSA_METMP Proteasome subunit alpha OS=Methanococcus maripaludis (strain S2 /
LL) GN=psmA PE=3 SV=1
Length = 259
Score = 192 bits (489), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 148/227 (65%), Gaps = 6/227 (2%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD TIFSPEGRLYQVEYA EA+ +A+GI KDGVVL ++++TSKL+ S S EK
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVS-SIEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+++IDDH+ A +G+++DA +LI+ AR++AQ +Y E + VE L + +CD KQ YTQ
Sbjct: 69 IFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQH 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG RPFG++ L G D+ + +L+ +DPSG +KA AIG+ A +L+ Y ++++
Sbjct: 129 GGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMT 187
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPE 231
E ++LAL LSKT + L + +++A + SGK+ ++ E
Sbjct: 188 VSEGMELALYALSKT--TEELKPENIDMA--IIKDSGKLVEKISVDE 230
>sp|A6URN9|PSA_METVS Proteasome subunit alpha OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1
Length = 259
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 141/211 (66%), Gaps = 4/211 (1%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD TIFSPEGRLYQVEYA EA+ +A+GI KDGVVL ++++TSKL+ S S EK
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVS-SIEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+++IDDH+ A +G+++DA +LI+ ARV+AQ +Y E + VE L + +CD KQ YT
Sbjct: 69 IFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHH 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG RPFG++ L G D+ + +L+ +DPSG +KA AIG+ A IL++ Y +++S
Sbjct: 129 GGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPVAMEILEEKYDENMS 187
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEV 215
E ++LA+ LSKT + L + +++A V
Sbjct: 188 VSEGMELAIYALSKTTE--ELKPENIDMAIV 216
>sp|A6VIP0|PSA_METM7 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=psmA PE=3 SV=1
Length = 259
Score = 192 bits (487), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 148/227 (65%), Gaps = 6/227 (2%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD TIFSPEGRLYQVEYA EA+ +A+GI KDGVVL ++++TSKL+ S S EK
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVS-SIEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+++IDDH+ A +G+++DA +LI+ AR++AQ +Y E + VE L + +CD KQ YTQ
Sbjct: 69 IFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQH 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG RPFG++ L G D+ + +L+ +DPSG +KA AIG+ A +L+ Y ++++
Sbjct: 129 GGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMT 187
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPE 231
E ++LAL LSKT + L + +++A + SGK+ ++ E
Sbjct: 188 VNEGMELALYALSKT--TEELKPENIDMA--IVKDSGKLVEKISVDE 230
>sp|A9A846|PSA_METM6 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=psmA PE=3 SV=1
Length = 259
Score = 188 bits (478), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 146/227 (64%), Gaps = 6/227 (2%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD TIFSPEGRLYQVEYA EA+ +A+GI DGVVL ++++TSKL+ S S EK
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVS-SIEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+++IDDH+ A +G+++DA +LI+ AR++AQ +Y E + VE L + +CD KQ YTQ
Sbjct: 69 IFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQH 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG RPFG++ L G D+ + +L+ +DPSG +KA AIG+ A +L+ Y +++
Sbjct: 129 GGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMI 187
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPE 231
E ++LAL LSKT + L + +++A + SGK+ ++ E
Sbjct: 188 VSEGMELALYALSKT--TEELKPENIDMA--IVKDSGKLVEKISVDE 230
>sp|Q8ZVM1|PSA_PYRAE Proteasome subunit alpha OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=psmA
PE=3 SV=1
Length = 243
Score = 185 bits (469), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 133/199 (66%), Gaps = 2/199 (1%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD TIFSPEG++YQVEYA EA+ +G+ K GVVL EK+ S L +S S EK
Sbjct: 9 YDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCKAGVVLTAEKRKISALFDSS-SLEK 67
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+Y ID+HVA + +G+++DA ILI+ AR A + + Y EP+ VE L +++C+ KQ YTQF
Sbjct: 68 IYLIDEHVAASPSGLLADARILIDYARDVALSHRFIYDEPIDVEFLTKAVCNLKQQYTQF 127
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG RPFGV+ L AG D+ +G +LY +DPSG Y G+ A AIGA + L+++YK D+
Sbjct: 128 GGARPFGVALLIAGVDR-HGARLYQTDPSGVYIGYFATAIGAESGTITEFLEKNYKFDME 186
Query: 185 REEAVQLALKVLSKTMDST 203
E ++LALK L+ ++ T
Sbjct: 187 MGECIELALKALASAVEIT 205
>sp|C3NEC6|PSA_SULIY Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14
/ Yellowstone #1) GN=psmA PE=3 SV=1
Length = 241
Score = 184 bits (466), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 137/209 (65%), Gaps = 3/209 (1%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD TIFSP+G LYQV+YA EA+ +AIGI SK GVV+ EK+ LL S EK
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVD-SIEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ
Sbjct: 69 VFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQH 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFGV+ + AG DK+ +LYM++PSG Y ++A AIG A L+++YK+D++
Sbjct: 129 GGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLT 187
Query: 185 REEAVQLALKVLSKTMD-STSLTSDKLEL 212
E+ + LALK LS T+ + LT + +E+
Sbjct: 188 IEDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C3NHC6|PSA_SULIN Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51
/ Yellowstone #2) GN=psmA PE=3 SV=1
Length = 241
Score = 184 bits (466), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 137/209 (65%), Gaps = 3/209 (1%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD TIFSP+G LYQV+YA EA+ +AIGI SK GVV+ EK+ LL S EK
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVD-SIEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ
Sbjct: 69 VFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQH 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFGV+ + AG DK+ +LYM++PSG Y ++A AIG A L+++YK+D++
Sbjct: 129 GGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLT 187
Query: 185 REEAVQLALKVLSKTMD-STSLTSDKLEL 212
E+ + LALK LS T+ + LT + +E+
Sbjct: 188 IEDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C3MVG1|PSA_SULIM Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=psmA PE=3 SV=1
Length = 241
Score = 184 bits (466), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 137/209 (65%), Gaps = 3/209 (1%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD TIFSP+G LYQV+YA EA+ +AIGI SK GVV+ EK+ LL S EK
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVD-SIEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ
Sbjct: 69 VFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQH 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFGV+ + AG DK+ +LYM++PSG Y ++A AIG A L+++YK+D++
Sbjct: 129 GGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLT 187
Query: 185 REEAVQLALKVLSKTMD-STSLTSDKLEL 212
E+ + LALK LS T+ + LT + +E+
Sbjct: 188 IEDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C3MQ43|PSA_SULIL Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=psmA PE=3 SV=1
Length = 241
Score = 184 bits (466), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 137/209 (65%), Gaps = 3/209 (1%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD TIFSP+G LYQV+YA EA+ +AIGI SK GVV+ EK+ LL S EK
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVD-SIEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ
Sbjct: 69 VFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQH 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFGV+ + AG DK+ +LYM++PSG Y ++A AIG A L+++YK+D++
Sbjct: 129 GGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLT 187
Query: 185 REEAVQLALKVLSKTMD-STSLTSDKLEL 212
E+ + LALK LS T+ + LT + +E+
Sbjct: 188 IEDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C4KHD9|PSA_SULIK Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=psmA PE=3 SV=1
Length = 241
Score = 184 bits (466), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 137/209 (65%), Gaps = 3/209 (1%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD TIFSP+G LYQV+YA EA+ +AIGI SK GVV+ EK+ LL S EK
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVD-SIEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ
Sbjct: 69 VFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQH 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFGV+ + AG DK+ +LYM++PSG Y ++A AIG A L+++YK+D++
Sbjct: 129 GGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLT 187
Query: 185 REEAVQLALKVLSKTMD-STSLTSDKLEL 212
E+ + LALK LS T+ + LT + +E+
Sbjct: 188 IEDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C3N5R0|PSA_SULIA Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27)
GN=psmA PE=3 SV=1
Length = 241
Score = 184 bits (466), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 137/209 (65%), Gaps = 3/209 (1%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD TIFSP+G LYQV+YA EA+ +AIGI SK GVV+ EK+ LL S EK
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVD-SIEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ
Sbjct: 69 VFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQH 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFGV+ + AG DK+ +LYM++PSG Y ++A AIG A L+++YK+D++
Sbjct: 129 GGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLT 187
Query: 185 REEAVQLALKVLSKTMD-STSLTSDKLEL 212
E+ + LALK LS T+ + LT + +E+
Sbjct: 188 IEDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|Q8TPX5|PSA_METAC Proteasome subunit alpha OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=psmA PE=3 SV=1
Length = 247
Score = 183 bits (465), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 154/244 (63%), Gaps = 10/244 (4%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD T+FSP+GRL+QVEYA EA+ +A+GI + DGVVL+ +K++TS+L++ + S EK
Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVE-AESIEK 65
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+++ID+H+ A +G+++DA L++ ARV+AQ +Y EP+ VE + + +CD KQ YTQ+
Sbjct: 66 IFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQY 125
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RP+G + L AG D N +L+ +DPSG +KA AIGA A + + DY++D++
Sbjct: 126 GGVRPYGTALLIAGVDDNKP-RLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMN 184
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALS----KLLVKH 240
+ A+ L + L K + + LE+ V L K++ PE + ++L KH
Sbjct: 185 MDAAILLGMDALYKAAEG-KFDAGTLEVGVVSLEDK---KFRKLGPEEVENYVQQILEKH 240
Query: 241 GVTQ 244
T+
Sbjct: 241 KGTE 244
>sp|Q42134|PSA5B_ARATH Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2
PE=1 SV=2
Length = 237
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 142/217 (65%), Gaps = 12/217 (5%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD FSPEGRL+QVEYA+EAI +AIG+ +K+GVVL EK++TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+ +IDDH+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q+LCD +F
Sbjct: 67 IMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA---LRF 123
Query: 125 GG------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQD 178
G RPFGVS L AG D+N G LY +DPSG + A AIG+ ++ A S L++
Sbjct: 124 GEGEEESMSRPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQ 182
Query: 179 YKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 215
+ DI+ +EA +A+ +L + M+ +T + +++A+V
Sbjct: 183 FNKDITLQEAETIAVSILKQVMEE-KVTPNNVDIAKV 218
>sp|O81149|PSA5A_ARATH Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1
PE=1 SV=1
Length = 237
Score = 182 bits (463), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 153/241 (63%), Gaps = 18/241 (7%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD FSPEGRL+QVEYA+EAI +AIG+ +K+GVVL EK++TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+ +IDDH+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q+LCD +F
Sbjct: 67 IMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA---LRF 123
Query: 125 GG------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQD 178
G RPFGVS L AG D+N G LY +DPSG + A AIG+ ++ A S L++
Sbjct: 124 GEGEEESMSRPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQ 182
Query: 179 YKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLV 238
+ D+S +EA +A+ +L + M+ +T + +++A+V P+ Y + +P+ + ++
Sbjct: 183 FNKDLSLQEAETIAVSILKQVMEE-KVTPNNVDIAKV--APA----YHLYTPQEVEAVIA 235
Query: 239 K 239
+
Sbjct: 236 R 236
>sp|Q9YC01|PSA_AERPE Proteasome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=psmA PE=3
SV=1
Length = 258
Score = 182 bits (462), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 136/219 (62%), Gaps = 9/219 (4%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD TIFSPEG LYQV YA EA+ +++GI + +GVV+ EK+ L+ +K
Sbjct: 12 YDRAATIFSPEGDLYQVRYAFEAVKKGWTSLGIKTNEGVVIAAEKRFIGPLVDID-DIDK 70
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+YKIDDH+ A AG+ D ILI+ ARV R+ Y EP PVE + + + D KQ YTQ
Sbjct: 71 IYKIDDHIGVAFAGMGGDGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAYTQH 130
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFGV+ +FAG + + ++Y +DP G Y +KA AIG+ Q A + ++ Y+ D+S
Sbjct: 131 GGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSDMS 190
Query: 185 REEAVQLALKVL----SKTMD----STSLTSDKLELAEV 215
EEA +LALK+L KT++ + + D++ELA +
Sbjct: 191 LEEATKLALKILYAIIRKTVEDKEKAIATLPDQVELAYI 229
>sp|Q469M6|PSA_METBF Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=psmA PE=3 SV=1
Length = 249
Score = 182 bits (461), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 153/244 (62%), Gaps = 10/244 (4%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD T+FSP+GRL+QVEYA EA+ +A+GI + DGVVL+ +K++TS+L++ + S EK
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVE-AESIEK 67
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+++IDDH+ A +G+++DA L++ ARV+AQ +Y EP+ VE + + +CD KQ YTQ+
Sbjct: 68 IFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQY 127
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RP+G + L AG D N +L+ +DPSG +KA AIGA A + + +Y+ D++
Sbjct: 128 GGVRPYGTALLIAGVDDNLP-RLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQDMN 186
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALS----KLLVKH 240
+ A+ L + L + + + LE+ V L K++ PE + ++L KH
Sbjct: 187 MDAAILLGMDALYRAAEG-KFDASTLEVGIVSLQDK---KFRKLVPEEVENYVQQILEKH 242
Query: 241 GVTQ 244
T+
Sbjct: 243 KETE 246
>sp|Q9LSU1|PSA5_ORYSJ Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica
GN=PAE1 PE=2 SV=1
Length = 237
Score = 181 bits (460), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 142/217 (65%), Gaps = 12/217 (5%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD FSPEGRL+QVEYA+EAI +AIG+ +KDGVVL EK+VTS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPS-SVEK 66
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+ +ID+H+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q++CD +F
Sbjct: 67 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLA---LRF 123
Query: 125 GG------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQD 178
G RPFGVS L AG D+N G LY +DPSG + A AIG+ ++ A S L++
Sbjct: 124 GEGDEESMSRPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQ 182
Query: 179 YKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 215
Y +++ +EA +AL +L + M+ +T + +++A+V
Sbjct: 183 YNKELTLQEAETIALSILKQVMEE-KVTPNNVDIAKV 218
>sp|Q59565|PSA_METTE Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3
SV=1
Length = 247
Score = 181 bits (460), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 152/244 (62%), Gaps = 10/244 (4%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD T+FSP+GRL+QVEYA EA+ +A+GI + DGVVL+ +K++TS+L++ + S EK
Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVE-AESIEK 65
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
+++IDDH+ A +G+++DA L++ ARV+AQ +Y E + VE + + +CD KQ YTQ+
Sbjct: 66 IFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQY 125
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RP+G + L AG D +L+ +DPSG +KA AIGA A + + DYK+D++
Sbjct: 126 GGVRPYGTALLIAGVDDKRP-RLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKEDMN 184
Query: 185 REEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALS----KLLVKH 240
E A+ L + L K + + LE+ V L K++ PE + ++L KH
Sbjct: 185 IEAAILLGMDALYKAAEG-KFDAGTLEVGVVSLQDK---KFRKLEPEEVGNYVQQILEKH 240
Query: 241 GVTQ 244
T+
Sbjct: 241 KETE 244
>sp|Q9UXC6|PSA_SULSO Proteasome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=psmA PE=3 SV=1
Length = 241
Score = 181 bits (460), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 136/209 (65%), Gaps = 3/209 (1%)
Query: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEK 64
YD TIFSP+G LYQV+YA EA+ +AIGI SK VV+ EK+ LL S EK
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVD-SIEK 68
Query: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQF 124
++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ
Sbjct: 69 VFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQH 128
Query: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDIS 184
GG+RPFGV+ + AG DK+ +L+M++PSG Y ++A AIG A L+++YK+D++
Sbjct: 129 GGVRPFGVALVIAGIDKSVP-KLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLN 187
Query: 185 REEAVQLALKVLSKTMD-STSLTSDKLEL 212
EE + LALK LS T+ + LT + +E+
Sbjct: 188 VEETILLALKALSATLKPNEKLTPNTVEI 216
>sp|Q9UT97|PSA5_SCHPO Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pup2 PE=1 SV=1
Length = 247
Score = 181 bits (458), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/225 (44%), Positives = 144/225 (64%), Gaps = 16/225 (7%)
Query: 1 MSR-RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTS 59
M+R YD FSPEGRL+QVEYA+EAI +AIG+ +KD VVL EK++TS L++ S
Sbjct: 3 MTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLME-S 61
Query: 60 TSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQ 119
S EK+++ID H+ CA++G+ +DA +I ARVQ Q + + Y EP +E QS+CD
Sbjct: 62 HSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLA- 120
Query: 120 GYTQFGG---------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQA 170
+FG RPFGV+ L AG D+ +G QLY S+PSG Y ++A AIG+ ++
Sbjct: 121 --LRFGEGEDGEERIMSRPFGVALLIAGIDE-HGPQLYHSEPSGTYFRYEAKAIGSGSEP 177
Query: 171 AQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 215
A+S L +++ D++ EEA L LKVL + M+ L S ++LA+V
Sbjct: 178 AKSELVKEFHKDMTLEEAEVLILKVLRQVMEE-KLDSKNVQLAKV 221
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,582,741
Number of Sequences: 539616
Number of extensions: 3257022
Number of successful extensions: 10265
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 9423
Number of HSP's gapped (non-prelim): 469
length of query: 250
length of database: 191,569,459
effective HSP length: 115
effective length of query: 135
effective length of database: 129,513,619
effective search space: 17484338565
effective search space used: 17484338565
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)