Query 025641
Match_columns 250
No_of_seqs 297 out of 1654
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 14:28:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025641.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025641hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fuk_A Methionine aminopeptida 100.0 5.1E-43 1.7E-47 322.7 21.1 177 68-244 5-197 (337)
2 3s6b_A Methionine aminopeptida 100.0 5.3E-42 1.8E-46 319.8 21.4 177 68-244 56-240 (368)
3 2b3h_A Methionine aminopeptida 100.0 1.2E-41 4E-46 313.4 19.9 177 68-244 25-209 (329)
4 3pka_A Methionine aminopeptida 100.0 1.1E-39 3.8E-44 293.9 21.8 173 71-244 3-175 (285)
5 3tb5_A Methionine aminopeptida 100.0 1.1E-33 3.9E-38 250.9 18.0 138 107-244 1-138 (264)
6 3mx6_A Methionine aminopeptida 100.0 1.3E-32 4.5E-37 244.2 17.4 139 106-244 4-142 (262)
7 1o0x_A Methionine aminopeptida 100.0 2E-32 6.8E-37 243.3 17.3 140 105-244 11-151 (262)
8 3tav_A Methionine aminopeptida 100.0 5.5E-32 1.9E-36 243.6 18.7 142 103-244 25-169 (286)
9 2gg2_A Methionine aminopeptida 100.0 3.9E-32 1.3E-36 240.9 17.5 138 107-244 1-140 (263)
10 1qxy_A Methionyl aminopeptidas 100.0 1.6E-31 5.6E-36 235.1 12.5 135 110-244 3-138 (252)
11 3q6d_A Proline dipeptidase; st 100.0 2.5E-30 8.7E-35 238.0 13.9 139 101-244 121-259 (356)
12 2zsg_A Aminopeptidase P, putat 100.0 5.5E-30 1.9E-34 235.3 15.0 137 103-244 126-262 (359)
13 1wy2_A XAA-Pro dipeptidase; st 100.0 7.7E-30 2.6E-34 235.3 15.7 137 103-244 120-256 (351)
14 3ig4_A XAA-Pro aminopeptidase; 100.0 1.2E-29 4.2E-34 240.5 12.5 137 103-244 164-301 (427)
15 1wn1_A Dipeptidase; prolidase, 100.0 3.1E-29 1.1E-33 231.7 14.4 136 103-244 124-259 (356)
16 2v3z_A XAA-Pro aminopeptidase; 100.0 4E-29 1.4E-33 237.1 14.4 138 103-245 168-306 (440)
17 4fkc_A XAA-Pro aminopeptidase; 100.0 2.9E-29 9.8E-34 232.6 12.4 138 102-244 142-280 (377)
18 4ege_A Dipeptidase PEPE; struc 100.0 6.3E-29 2.1E-33 231.7 14.6 136 103-244 143-279 (378)
19 2q8k_A Proliferation-associate 100.0 1.1E-28 3.7E-33 232.4 15.5 141 103-244 12-165 (401)
20 1kp0_A Creatine amidinohydrola 100.0 5.8E-29 2E-33 231.9 10.8 142 103-244 150-292 (402)
21 3fm3_A Methionine aminopeptida 100.0 3.8E-28 1.3E-32 225.6 15.6 136 103-244 32-171 (358)
22 2iw2_A XAA-Pro dipeptidase; me 99.9 9E-28 3.1E-32 231.1 13.9 137 103-244 180-322 (494)
23 3rva_A Organophosphorus acid a 99.9 2.1E-27 7.3E-32 226.6 14.7 135 104-244 153-290 (451)
24 1chm_A Creatine amidinohydrola 99.9 7.3E-28 2.5E-32 225.4 11.0 142 103-245 150-293 (401)
25 4b28_A Metallopeptidase, famil 99.9 7.1E-27 2.4E-31 224.0 10.9 136 103-244 222-365 (470)
26 3l24_A XAA-Pro dipeptidase; PI 99.9 1.5E-26 5.3E-31 223.9 13.2 134 104-244 153-287 (517)
27 3biq_A FACT complex subunit SP 99.9 1.2E-26 4.1E-31 220.7 11.3 138 103-242 170-332 (467)
28 3cb6_A FACT complex subunit SP 99.9 2.8E-26 9.5E-31 216.5 11.0 140 103-244 170-327 (444)
29 1xgs_A Methionine aminopeptida 99.9 1.1E-25 3.8E-30 203.8 12.5 120 114-244 1-123 (295)
30 2nw5_A Methionine aminopeptida 99.9 2.1E-25 7.2E-30 207.4 13.3 128 111-244 42-173 (360)
31 3ctz_A XAA-Pro aminopeptidase 99.9 3.6E-24 1.2E-28 211.4 14.1 141 103-247 314-462 (623)
32 1b6a_A Methionine aminopeptida 99.9 4.5E-24 1.5E-28 204.7 11.1 130 106-244 154-292 (478)
33 4b6a_t Probable metalloproteas 99.6 4.1E-15 1.4E-19 145.0 15.7 137 107-243 37-219 (614)
34 3q6d_A Proline dipeptidase; st 97.2 0.0026 8.8E-08 57.7 11.2 100 118-220 239-340 (356)
35 4ege_A Dipeptidase PEPE; struc 97.1 0.0036 1.2E-07 57.7 10.8 99 118-219 259-359 (378)
36 2zsg_A Aminopeptidase P, putat 97.0 0.0041 1.4E-07 56.2 10.5 99 118-219 242-342 (359)
37 1wy2_A XAA-Pro dipeptidase; st 97.0 0.0052 1.8E-07 55.9 11.0 99 118-219 236-336 (351)
38 3mx6_A Methionine aminopeptida 97.0 0.004 1.4E-07 54.3 9.8 85 118-205 122-210 (262)
39 1wn1_A Dipeptidase; prolidase, 96.9 0.0053 1.8E-07 55.9 10.7 99 118-219 239-339 (356)
40 3pka_A Methionine aminopeptida 96.8 0.004 1.4E-07 55.2 8.7 85 118-205 155-243 (285)
41 1o0x_A Methionine aminopeptida 96.8 0.0044 1.5E-07 54.0 8.9 85 118-205 131-219 (262)
42 2gg2_A Methionine aminopeptida 96.7 0.0096 3.3E-07 51.7 10.0 85 118-205 120-208 (263)
43 1qxy_A Methionyl aminopeptidas 96.6 0.0095 3.2E-07 51.3 9.4 100 118-220 118-240 (252)
44 3tb5_A Methionine aminopeptida 96.6 0.011 3.9E-07 51.3 9.9 85 119-206 119-207 (264)
45 4fkc_A XAA-Pro aminopeptidase; 96.6 0.0096 3.3E-07 54.3 9.7 99 118-219 260-360 (377)
46 3cb6_A FACT complex subunit SP 96.6 0.014 4.6E-07 54.4 10.9 101 118-220 307-421 (444)
47 2v3z_A XAA-Pro aminopeptidase; 96.6 0.025 8.5E-07 53.0 12.5 100 119-219 286-412 (440)
48 3tav_A Methionine aminopeptida 96.5 0.0075 2.6E-07 53.3 8.4 99 119-220 150-276 (286)
49 1kp0_A Creatine amidinohydrola 96.4 0.0096 3.3E-07 54.6 8.7 98 118-218 272-380 (402)
50 3biq_A FACT complex subunit SP 96.4 0.022 7.7E-07 53.4 11.3 100 118-219 314-425 (467)
51 3ig4_A XAA-Pro aminopeptidase; 96.4 0.019 6.6E-07 53.9 10.5 100 119-219 282-390 (427)
52 2b3h_A Methionine aminopeptida 96.2 0.011 3.9E-07 53.6 8.0 99 118-219 189-309 (329)
53 3s6b_A Methionine aminopeptida 96.2 0.012 4.2E-07 54.4 8.1 84 119-205 221-308 (368)
54 1xgs_A Methionine aminopeptida 96.0 0.017 5.8E-07 51.5 7.7 84 118-204 103-191 (295)
55 1chm_A Creatine amidinohydrola 95.9 0.026 9.1E-07 51.9 9.0 98 118-218 272-380 (401)
56 3rva_A Organophosphorus acid a 95.3 0.15 5.1E-06 48.1 11.8 86 119-205 271-389 (451)
57 2nw5_A Methionine aminopeptida 95.2 0.03 1E-06 51.5 6.5 93 118-214 153-260 (360)
58 2q8k_A Proliferation-associate 94.9 0.15 5.1E-06 47.4 10.3 83 118-205 145-239 (401)
59 4b28_A Metallopeptidase, famil 94.7 0.037 1.3E-06 52.6 5.8 98 118-220 345-451 (470)
60 3l24_A XAA-Pro dipeptidase; PI 94.7 0.18 6E-06 48.6 10.5 86 119-205 268-386 (517)
61 4fuk_A Methionine aminopeptida 94.6 0.056 1.9E-06 48.9 6.5 85 119-206 178-266 (337)
62 3ctz_A XAA-Pro aminopeptidase 94.2 0.1 3.6E-06 51.1 7.9 95 119-218 440-542 (623)
63 2iw2_A XAA-Pro dipeptidase; me 93.7 0.32 1.1E-05 46.2 10.0 88 118-205 302-418 (494)
64 1b6a_A Methionine aminopeptida 93.6 0.15 5.2E-06 48.6 7.5 91 117-209 271-374 (478)
65 3fm3_A Methionine aminopeptida 83.2 2.1 7.2E-05 38.9 6.4 79 123-205 156-248 (358)
66 4b6a_t Probable metalloproteas 56.1 55 0.0019 32.0 9.6 31 132-162 230-260 (614)
67 2ki0_A DS119; beta-alpha-beta, 47.4 8.1 0.00028 22.9 1.4 24 212-235 4-27 (36)
68 3gty_X Trigger factor, TF; cha 34.0 33 0.0011 31.8 4.0 45 141-209 129-173 (433)
69 1w26_A Trigger factor, TF; cha 30.0 63 0.0022 29.8 5.2 57 139-219 130-190 (432)
70 1hxv_A Trigger factor; FKBP fo 29.0 54 0.0018 24.3 3.8 32 188-219 27-62 (113)
71 2pbc_A FK506-binding protein 2 27.0 74 0.0025 22.5 4.2 33 188-220 3-42 (102)
72 2m0n_A Putative uncharacterize 25.0 73 0.0025 24.3 3.8 28 87-119 22-49 (112)
73 2y78_A Peptidyl-prolyl CIS-tra 24.7 1.3E+02 0.0046 22.7 5.5 32 188-219 40-78 (133)
74 4dip_A Peptidyl-prolyl CIS-tra 23.8 1E+02 0.0034 22.8 4.5 34 187-220 25-68 (125)
75 2cjj_A Radialis; plant develop 22.8 1.8E+02 0.0063 21.0 5.6 52 110-162 10-70 (93)
76 1t11_A Trigger factor, TF; hel 21.4 49 0.0017 30.2 2.7 56 140-219 134-193 (392)
No 1
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=100.00 E-value=5.1e-43 Score=322.73 Aligned_cols=177 Identities=45% Similarity=0.738 Sum_probs=165.1
Q ss_pred CCCCCCCCCcccCCCCCCCCCCCCCCCCccCCCCC----------------CCCCCCcccCHHHHHHHHHHHHHHHHHHH
Q 025641 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPI----------------GIVSGPEVHDEKGIECMRVSGRLAAQVLE 131 (250)
Q Consensus 68 ~~~~~~~l~~g~~s~~~~vp~~i~~P~y~~~~~~~----------------~~~~~R~VKs~eEIe~mR~A~~ia~~~l~ 131 (250)
+|+|+|+||||++||++.||+||++|+|+...... .....|.|||++||+.||+|++|++++++
T Consensus 5 ~~~~~g~~~p~~~sp~~~vP~~i~~p~y~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~VKs~~EI~~mR~A~~i~~~a~~ 84 (337)
T 4fuk_A 5 TFDFTGPLRPGKITPRRAVPSHILRPDYADRAGGVSASEEKDRGSKVKVYNIQFLHDDSKKTAEIQRIKTVCQLSREVLD 84 (337)
T ss_dssp CCCCCSSCCCCCCCCCCCCCTTSCCCTTSSSTTCCCHHHHHHTTCCCCCCCCTTTTCTTC--CHHHHHHHHHHHHHHHHH
T ss_pred CcceecccccccCCCCCCCCCCCCCCCcccCCCCCCccccccccCccccccchhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999654311 12356899999999999999999999999
Q ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCCCCCcCCCCCEEEEEEeeEECCEEec
Q 025641 132 YAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGD 211 (250)
Q Consensus 132 ~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD 211 (250)
.+++.++||+||.||++.+++++.++|+++++.+|.+|++++|+|.|+++||++|++++|++||+|++|+|+.|+||++|
T Consensus 85 ~~~~~ikpG~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~~g~n~~~~H~~~~~~~l~~GD~v~iD~g~~~~GY~sD 164 (337)
T 4fuk_A 85 IATAAAKPGITTDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNEVICHGIPDSRELEEGDILNIDVSSYLNGFHGD 164 (337)
T ss_dssp HHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEE
T ss_pred HHHHHccCCCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceeeccccccccCCCCCCccccCCCEEEEecceeECCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 212 TSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 212 ~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
++|||++|+++++++++|+++++|+++|++++.
T Consensus 165 ~tRT~~vG~~~~~~~~l~~~v~ea~~~ai~~~k 197 (337)
T 4fuk_A 165 LNETVFIGRPDDDSVRLVHAAYECLCAGIGVVK 197 (337)
T ss_dssp EEEEEESSSCCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred eeeeEEeCCccHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999874
No 2
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=100.00 E-value=5.3e-42 Score=319.82 Aligned_cols=177 Identities=45% Similarity=0.726 Sum_probs=168.9
Q ss_pred CCCCCCCCCcccCCCCCCCCCCCCCCCCccCCCCCC-----CCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 025641 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIG-----IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (250)
Q Consensus 68 ~~~~~~~l~~g~~s~~~~vp~~i~~P~y~~~~~~~~-----~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvT 142 (250)
+|+|+++||||.+||++.||+||++|+|+.++.+.. ....+.|||++||+.||+|+++++++++.+.+.++||+|
T Consensus 56 ~~~~~~~~~~~~~~~~~~vp~~i~~p~y~~~~~~~~~~~~~~~~~~~IKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvT 135 (368)
T 3s6b_A 56 NFKFTGDVRPWPLSKINHVPSHIERPDYAISSIPESELIYKRKSDIYVNNEEEIQRIREACILGRKTLDYAHTLVSPGVT 135 (368)
T ss_dssp TCCCSSSCCCCCCCCCCCCCTTSCCCTTTTTSCCHHHHSCCCTTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCB
T ss_pred CCCcCCcccccccCCCCCCCcCCCCCccccCCCChhhhhccccCCceeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 488999999999999999999999999998876432 246789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCCCCCcCCCCCEEEEEEeeEECCEEeceeeEEEcC---
Q 025641 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCG--- 219 (250)
Q Consensus 143 e~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG--- 219 (250)
|.||++.+++.+.++|++|++++|.+|++++|+|+|+++||++|++++|++||+|+||+|+.|+||++|++|||+||
T Consensus 136 E~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~sg~N~~i~H~~p~~r~L~~GDiV~iD~G~~~~GY~sDitRT~~vGg~~ 215 (368)
T 3s6b_A 136 TDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCCTSVNEIVCHGIPDYRPLKSGDIINIDISVFYKGVHSDLNETYFVGDIN 215 (368)
T ss_dssp HHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSCGG
T ss_pred HHHHHHHHHHHHHHcCCccccccccCCCCeEEEcCccccccCCCCCccccCCCEEEEEEeEEECcEEEEEEEEEEECCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 220 DVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 220 ~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
+++++++++|+++++|++++++++.
T Consensus 216 ~~s~e~~~ly~~v~ea~~aai~~ik 240 (368)
T 3s6b_A 216 DVPKEGKELVETCYFSLMEAIKKCK 240 (368)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999875
No 3
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=100.00 E-value=1.2e-41 Score=313.36 Aligned_cols=177 Identities=48% Similarity=0.786 Sum_probs=167.8
Q ss_pred CCCCCCCCCc-ccCCCCCCCCCCCCCCCCccC--CCCCC-C----CCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 025641 68 PNRRRKRLRP-GKVSPHRPVPDHIPRPPYVNS--QKPIG-I----VSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKP 139 (250)
Q Consensus 68 ~~~~~~~l~~-g~~s~~~~vp~~i~~P~y~~~--~~~~~-~----~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~p 139 (250)
+|+|+++|+| |.++|.+.||++|++|+|+.. +.++. . ..+|.|||++||+.||+|+++++++++.+.+.++|
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~~~iKs~~EI~~mR~A~~ia~~al~~~~~~i~p 104 (329)
T 2b3h_A 25 PYRYTGKLRPHYPLMPTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEGMRLVCRLAREVLDVAAGMIKP 104 (329)
T ss_dssp -CCCSSSCCCCCCCCCCCCCCTTSCCCGGGGSTTCCCHHHHHTTTCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCT
T ss_pred CcccCCccCCCCccCCccCCCcccCChhhcccccCCCchhhhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 5999999999 999999999999999999987 54321 1 36899999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCCCCCcCCCCCEEEEEEeeEECCEEeceeeEEEcC
Q 025641 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCG 219 (250)
Q Consensus 140 GvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG 219 (250)
|+||.||++.+++.+.++|++|++++|.+||+++|+|+|++++|++|++++|++||+|+||+|+.|+||++|++|||+||
T Consensus 105 Gvte~el~~~~~~~~~~~G~~~~~~~y~~fp~iv~sg~n~~~~H~~p~~~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG 184 (329)
T 2b3h_A 105 GVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVG 184 (329)
T ss_dssp TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEEEEEEEECS
T ss_pred CCcHHHHHHHHHHHHHHcCCccccccccCCCCeEEecCCCCcCCCCCCCcCCCCCCEEEEEeeEEECCEEEeeEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 220 DVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 220 ~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
+++++++++|+++++|++++++++.
T Consensus 185 ~~~~~~~~l~~~v~~a~~~ai~~~k 209 (329)
T 2b3h_A 185 EVDDGARKLVQTTYECLMQAIDAVK 209 (329)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999885
No 4
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=100.00 E-value=1.1e-39 Score=293.85 Aligned_cols=173 Identities=53% Similarity=0.828 Sum_probs=164.3
Q ss_pred CCCCCCcccCCCCCCCCCCCCCCCCccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHH
Q 025641 71 RRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAV 150 (250)
Q Consensus 71 ~~~~l~~g~~s~~~~vp~~i~~P~y~~~~~~~~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v 150 (250)
.++++|||.+||.+.||+||++|+|+..+..+. ..+|.|||++||+.||+|+++++++++.+.+.++||+||.||++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~R~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~el~~~~ 81 (285)
T 3pka_A 3 SRTALSPGVLSPTRPVPNWIARPEYVGKPAAQE-GSEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIA 81 (285)
T ss_dssp CCCCCCCCCCCCCCCCCTTSCCCTTTTSSSCSC-SCSCSBCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHH
T ss_pred CCCCCcccccCCCCCCcccCCCCcccccCCCCc-ccceecCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHH
Confidence 467899999999999999999999998765432 3789999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCCCCCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHH
Q 025641 151 HQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (250)
Q Consensus 151 ~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~ 230 (250)
++.+.++|+++++++|.+|++++|+|.|+.++|+.|++++|++||+|++|+|+.|+||++|++|||++|+++++++++|+
T Consensus 82 ~~~~~~~G~~~~~~~~~~f~~iv~~g~n~~~~H~~p~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~ 161 (285)
T 3pka_A 82 HEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVD 161 (285)
T ss_dssp HHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHH
T ss_pred HHHHHHcCCccccccccCCCCceEecccceeecCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHH
Confidence 99999999999888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc
Q 025641 231 VVCWNFKLHRVLCF 244 (250)
Q Consensus 231 ~~~eA~~aaia~~~ 244 (250)
+++++++++++++.
T Consensus 162 ~v~~a~~~~i~~~k 175 (285)
T 3pka_A 162 RTREATMRAINTVK 175 (285)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 5
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=100.00 E-value=1.1e-33 Score=250.94 Aligned_cols=138 Identities=32% Similarity=0.519 Sum_probs=134.5
Q ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCC
Q 025641 107 GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP 186 (250)
Q Consensus 107 ~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P 186 (250)
||.|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.++|+++.+.+|.+|+.++|+|.|+..+|+.|
T Consensus 1 M~~IKs~~EI~~mr~A~~i~~~a~~~~~~~ikpG~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~H~~~ 80 (264)
T 3tb5_A 1 MITLKSPREIEMMDESGELLADVHRHLRTFIKPGITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATCCSINDEICHGFP 80 (264)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCCSEEEEETTEEECCCC
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHHHcCCCcccccccCCCcceEECCcccccCCCC
Confidence 68999999999999999999999999999999999999999999999999999998888889999999999999999999
Q ss_pred CCCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 187 DSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 187 ~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
++++|++||+|++|+|+.|+||++|+||||++|+++++++++|+++++|++++++++.
T Consensus 81 ~~~~l~~Gdlv~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a~~~~i~~~k 138 (264)
T 3tb5_A 81 RKKVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQ 138 (264)
T ss_dssp CSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCccccCCCEEEEeccceecceeeecccccccCCccHHHHHHHHHHHHHHHHHHhhhC
Confidence 9999999999999999999999999999999999999999999999999999999874
No 6
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=100.00 E-value=1.3e-32 Score=244.25 Aligned_cols=139 Identities=41% Similarity=0.746 Sum_probs=133.5
Q ss_pred CCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCC
Q 025641 106 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI 185 (250)
Q Consensus 106 ~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~ 185 (250)
+++.|||++||+.||+|+++++++++.+.+.++||+||.||++.+++.+.++|+++++++|.+|++++|+|.|+.++|+.
T Consensus 4 ~~~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~~~~H~~ 83 (262)
T 3mx6_A 4 SMIKIHTEKDFIKMRAAGKLAAETLDFITDHVKPNVTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSICTSINHVVCHGI 83 (262)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHHGGGCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCC
T ss_pred CcceeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEecccccccCCC
Confidence 56899999999999999999999999999999999999999999999999999999888888899999999999999999
Q ss_pred CCCCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 186 PDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 186 P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
|++++|++||+|++|+|+.|+||++|++|||++|+++++++++|++++++++++++++.
T Consensus 84 p~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~k 142 (262)
T 3mx6_A 84 PNDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVR 142 (262)
T ss_dssp CCSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCS
T ss_pred CCCcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999998864
No 7
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00 E-value=2e-32 Score=243.27 Aligned_cols=140 Identities=26% Similarity=0.454 Sum_probs=134.0
Q ss_pred CCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccC
Q 025641 105 VSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG 184 (250)
Q Consensus 105 ~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg 184 (250)
..+|+|||++||+.||+|+++++++++.+.+.++||+||.||++.+++.+.++|+++.+.+|.+|++++|+|+|+.++|+
T Consensus 11 ~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~f~~~v~~g~n~~~~H~ 90 (262)
T 1o0x_A 11 HHMIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVVHG 90 (262)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEETTBCSCC
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHcCCccccccccCCCcceEecccccccCC
Confidence 36899999999999999999999999999999999999999999999999999998877777789999999999999999
Q ss_pred CCCCCc-CCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 185 IPDSRA-LEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 185 ~P~~r~-Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
.|++++ |++||+|++|+|+.|+||++|++|||++|+++++++++|++++++++++++++.
T Consensus 91 ~p~~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~k 151 (262)
T 1o0x_A 91 LPLKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIK 151 (262)
T ss_dssp CCCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999 999999999999999999999999999999999999999999999999999875
No 8
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=100.00 E-value=5.5e-32 Score=243.56 Aligned_cols=142 Identities=32% Similarity=0.530 Sum_probs=136.1
Q ss_pred CCCCCC--cccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCc
Q 025641 103 GIVSGP--EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 180 (250)
Q Consensus 103 ~~~~~R--~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~ 180 (250)
.+.++| .|||++||+.||+|+++++++++.+.+.++||+||.||++.+++.+.++|+++.+.+|.+|++++|+|.|+.
T Consensus 25 ~i~~~R~~~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~~ 104 (286)
T 3tav_A 25 LFGRKKTVEQRTPGELDAMAAAGSIVGAALVAVRDAAKAGVSTLELDQVAESVIREAGAVPSFLGYHGFPASICSSVNDQ 104 (286)
T ss_dssp TTCSCSBCCBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEETTB
T ss_pred HHHHhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCcccccccCCCCCceEEecCcc
Confidence 356788 999999999999999999999999999999999999999999999999999988777778999999999999
Q ss_pred cccCCCC-CCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 181 ICHGIPD-SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 181 ~~Hg~P~-~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
++|+.|+ +++|++||+|++|+|+.|+||++|++|||++|+++++++++|++++++++++++++.
T Consensus 105 ~~H~~p~~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~k 169 (286)
T 3tav_A 105 VVHGIPSATAVLADGDLVSIDCGAILDGWHGDSAWTFAVGTVIPSDEALSEATRLSMEAGIAAMI 169 (286)
T ss_dssp CSCCCCCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ccCCCCCCCcccCCCCEEEEEEEEEECCEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999 899999999999999999999999999999999999999999999999999999874
No 9
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=100.00 E-value=3.9e-32 Score=240.93 Aligned_cols=138 Identities=43% Similarity=0.724 Sum_probs=133.6
Q ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHH-HHHCCCCCCCCCCCCCCceeeecCCCccccCC
Q 025641 107 GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQM-IIDNGAYPSPLGYGGFPKSVCTSVNECICHGI 185 (250)
Q Consensus 107 ~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~-i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~ 185 (250)
+|.|||++||+.||+|+++++++++.+.+.++||+||.||++.+++. +.++|+++++++|.+|++++|+|.|+.++|+.
T Consensus 1 m~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~~~~~~~~g~~~~~~~~~~f~~iv~~g~n~~~~H~~ 80 (263)
T 2gg2_A 1 AISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGI 80 (263)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHGGGCSTTCBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSEEEETTEEECCC
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHhCCccccccccCCCcceEecccccccCCC
Confidence 58999999999999999999999999999999999999999999999 88999998888888999999999999999999
Q ss_pred CCC-CcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 186 PDS-RALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 186 P~~-r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
|++ ++|++||+|++|+|+.|+||++|++|||++|+++++++++|+++++|+++++++++
T Consensus 81 p~~~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~k 140 (263)
T 2gg2_A 81 PDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVK 140 (263)
T ss_dssp CCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred CCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 998 99999999999999999999999999999999999999999999999999999876
No 10
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=99.97 E-value=1.6e-31 Score=235.12 Aligned_cols=135 Identities=33% Similarity=0.582 Sum_probs=128.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCCCCC
Q 025641 110 VHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSR 189 (250)
Q Consensus 110 VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P~~r 189 (250)
|||++||+.||+|+++++++++.+.+.++||+||.||++.+++.+.++|+++.+++|.+|++++|+|.|+.++|+.|+++
T Consensus 3 iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~~~~~~~~f~~~v~~g~n~~~~H~~p~~~ 82 (252)
T 1qxy_A 3 VKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKR 82 (252)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTCEEHHHHHHCCSSSSEEEETTEEECCCCCSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEEcCCccccCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999876555557999999999999999999999
Q ss_pred cCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCH-HHHHHHHHHHHHHHHHHHHhc
Q 025641 190 ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDD-EARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 190 ~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~-e~~~l~~~~~eA~~aaia~~~ 244 (250)
+|++||+|++|+|+.|+||++|++|||++|++++ +++++|++++++++++++++.
T Consensus 83 ~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~~~~~a~~~~i~~~k 138 (252)
T 1qxy_A 83 VIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVK 138 (252)
T ss_dssp BCCTTCEEEEEEEEEETTEEEEEEEEEECSCCSCTHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999 999999999999999999874
No 11
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=99.97 E-value=2.5e-30 Score=237.96 Aligned_cols=139 Identities=18% Similarity=0.316 Sum_probs=132.3
Q ss_pred CCCCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCc
Q 025641 101 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 180 (250)
Q Consensus 101 ~~~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~ 180 (250)
.+.+..+|+|||++||+.||+|+++++.++..+.+.++||+||.||++.+++.+.++|+.+. +|++++|+|.|++
T Consensus 121 ~~~~~~~R~iK~~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~e~~~~~~~~~~~~g~~~~-----~f~~iv~~g~n~~ 195 (356)
T 3q6d_A 121 SGLVEKLRLIKTDSEIKILKEAAQIADAAFEHILSFIRPGVSEIEVSNELEFFMRKQGATSS-----SFDIIVASGLRSA 195 (356)
T ss_dssp CSHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTTCCTTCBHHHHHHHHHHHHHHTTCSEE-----SSCCEEEEGGGGG
T ss_pred hhhhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCCcC-----CCCCEEEEcCccc
Confidence 34567889999999999999999999999999999999999999999999999999998753 5899999999999
Q ss_pred cccCCCCCCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 181 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 181 ~~Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
.+|+.|++++|++||+|++|+|+.|+||++|++|||++|+++++++++|+++.++++++++++.
T Consensus 196 ~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~ 259 (356)
T 3q6d_A 196 LPHGVASEKVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIK 259 (356)
T ss_dssp CTTCBCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCCCCcccCCCCEEEEEEeEEECCEEeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999875
No 12
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=99.97 E-value=5.5e-30 Score=235.29 Aligned_cols=137 Identities=20% Similarity=0.266 Sum_probs=131.1
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccc
Q 025641 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (250)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~ 182 (250)
.+..+|.|||++||+.||+|+++++.+++.+.+.++||+||.||++.+++.+.++|+.+. +|++++|+|.|++++
T Consensus 126 ~i~~lr~iK~~~Ei~~~r~a~~~~~~~~~~~~~~~~~G~te~e~~~~~~~~~~~~g~~~~-----~f~~iv~~g~~~~~~ 200 (359)
T 2zsg_A 126 EVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQIRAGMTEKEIAALLEYTMRKEGAEGV-----AFDTIVASGCRSALP 200 (359)
T ss_dssp HHHHHHHBCCHHHHHHHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHHHHTTCSEE-----SSCCEEEEGGGGGST
T ss_pred hhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCC-----CCCCEEEEccccccc
Confidence 467889999999999999999999999999999999999999999999999999998752 599999999999999
Q ss_pred cCCCCCCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 183 Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
|+.|++++|++||+|++|+|+.|+||++|++|||++|+++++++++|+++.++++++++++.
T Consensus 201 h~~~~~~~l~~gd~v~iD~g~~~~gy~~D~tRt~~~G~~~~~~~~~~~~v~~~~~~~~~~~~ 262 (359)
T 2zsg_A 201 HGKASDKVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAK 262 (359)
T ss_dssp TCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCCcccCCCCEEEEEEeEEECCEEEeeeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999999999999999999874
No 13
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=99.97 E-value=7.7e-30 Score=235.28 Aligned_cols=137 Identities=19% Similarity=0.267 Sum_probs=131.3
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccc
Q 025641 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (250)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~ 182 (250)
.+..+|+|||++||+.||+|+++++++++.+.+.++||+||.||++.+++.+.++|+++ .+|++++|+|.|++.+
T Consensus 120 ~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~-----~~f~~iv~~g~n~~~~ 194 (351)
T 1wy2_A 120 VIRDMRIIKSEKEIKIIEKACEIADKAVMAAIEEITEGKKEREVAAKVEYLMKMNGAEK-----PAFDTIIASGYRSALP 194 (351)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCSE-----ESSCCEEEEGGGGGST
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCC-----CCCCCEEEEccccccc
Confidence 46678999999999999999999999999999999999999999999999999999875 2699999999999999
Q ss_pred cCCCCCCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 183 Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
|+.|++++|++||+|++|+|+.|+||++|++|||++|+++++++++|+++.++++++++++.
T Consensus 195 H~~~~~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~ 256 (351)
T 1wy2_A 195 HGVASDKRIERGDLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAK 256 (351)
T ss_dssp TCBCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCCcccCCCCEEEEEEEEEECCEEecceEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999875
No 14
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=99.96 E-value=1.2e-29 Score=240.54 Aligned_cols=137 Identities=15% Similarity=0.188 Sum_probs=130.5
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccc
Q 025641 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (250)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~ 182 (250)
.+.++|.|||++||+.||+|+++++++++.+++.++||+||.||++.++..+.++|+.. .+|+++||+|.|++++
T Consensus 164 ~i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~-----~~f~~ivasG~n~~~~ 238 (427)
T 3ig4_A 164 NICELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHAKADMMEYELEAQFDFTLKSSGIKH-----HAFNTILASGKNATVL 238 (427)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEHHHHHHHHHHHHHHTTCCE-----ESSCCEEEEGGGGGST
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC-----CCCCCEEEECcccccc
Confidence 35678999999999999999999999999999999999999999999999999999853 2599999999999999
Q ss_pred cCCCCCCcCCCCCEEEEEEeeEECCEEeceeeEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 183 Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~V-G~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
|+.|++++|++||+|++|+|+.|+||++|+||||+| |+++++++++|+++.++++++++++.
T Consensus 239 H~~~~~~~l~~GdlvliD~G~~~~gY~sDitRT~~v~G~~s~~~~~~y~~vl~a~~~~i~~~k 301 (427)
T 3ig4_A 239 HYEDNDAQIQNGDLVLLDLGAQKDYYNADISYTFPANGTFSSRQKQIYNIVLNALKETTEIIK 301 (427)
T ss_dssp TCCCCCSEECTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ccCcccccCCCCCEEEEEeeeEECcEEEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999 89999999999999999999999875
No 15
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=99.96 E-value=3.1e-29 Score=231.67 Aligned_cols=136 Identities=21% Similarity=0.211 Sum_probs=129.3
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccc
Q 025641 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (250)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~ 182 (250)
.+..+|+|||++||+.||+|+++++.+++.+.+.++||+||.||++.+++.+.++ +.+ .+|++++|+|.|+..+
T Consensus 124 ~i~~~R~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~-~~~-----~~f~~iv~~g~n~~~~ 197 (356)
T 1wn1_A 124 LIKELRMIKDKEEVKMMEHASRIADKVFEEILTWDLIGMKERELALKIELLIREL-SDG-----IAFEPIVASGENAANP 197 (356)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHHHHHHHHHHH-SSE-----ESSCCEEEEGGGGGCT
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHh-CcC-----CCCCcEEEEecccccc
Confidence 4667899999999999999999999999999999999999999999999999988 654 2589999999999999
Q ss_pred cCCCCCCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 183 Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
|+.|++++|++||+|++|+|+.|+||++|++|||++|+++++++++|+++.++++++++++.
T Consensus 198 H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~ 259 (356)
T 1wn1_A 198 HHEPGERKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVR 259 (356)
T ss_dssp TCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCB
T ss_pred cCCCCCCeecCCCEEEEEEEEEECCEEeccEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999874
No 16
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=99.96 E-value=4e-29 Score=237.10 Aligned_cols=138 Identities=22% Similarity=0.306 Sum_probs=131.5
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccc
Q 025641 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (250)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~ 182 (250)
.+..+|+|||++||+.||+|++++..++..+.+.++||+||.||++.++..+.++|+.+ .+|+++||+|.|++++
T Consensus 168 ~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~-----~~f~~iv~~G~n~~~~ 242 (440)
T 2v3z_A 168 VVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARY-----PSYNTIVGSGENGCIL 242 (440)
T ss_dssp HHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCCE-----ESSCCEEEEGGGGGST
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCc-----CCCCCeEEEcCccccc
Confidence 46678999999999999999999999999999999999999999999999999999864 2599999999999999
Q ss_pred cCCCCCCcCCCCCEEEEEEeeEECCEEeceeeEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcc
Q 025641 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVVCWNFKLHRVLCFL 245 (250)
Q Consensus 183 Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~V-G~~~~e~~~l~~~~~eA~~aaia~~~~ 245 (250)
|+.|++++|++||+|++|+|+.|+||++|+||||++ |+++++++++|+++.+++++++++++-
T Consensus 243 H~~~~~~~l~~gd~vliD~G~~~~gy~sD~tRT~~v~G~~~~~~~~~y~~v~~a~~~~i~~~~p 306 (440)
T 2v3z_A 243 HYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRP 306 (440)
T ss_dssp TCCCCCSBCCTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred cCCCCCccccCCCEEEEEeeEEECCEEEeeEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999 999999999999999999999998863
No 17
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=99.96 E-value=2.9e-29 Score=232.58 Aligned_cols=138 Identities=20% Similarity=0.212 Sum_probs=128.8
Q ss_pred CCCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHC-CCCCCCCCCCCCCceeeecCCCc
Q 025641 102 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN-GAYPSPLGYGGFPKSVCTSVNEC 180 (250)
Q Consensus 102 ~~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~-Ga~ps~l~y~gfp~~V~sg~N~~ 180 (250)
+.+.++|+|||++||+.||+|++++++++..+.+.++||+||.||++.++..+.++ |+.. .+|++++++|.|.+
T Consensus 142 ~~i~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~~G~tE~el~~~~~~~~~~~~g~~~-----~~f~~iv~~G~n~~ 216 (377)
T 4fkc_A 142 PVISELREIKDKDEIKAHKKAAEIVDKVFYRFIEGKLEGKSERELANRIEYMIKNEFGADD-----VSFEPIVASGPNGA 216 (377)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHHHHHHHHHTSTTCCE-----ESSCCEEEEGGGGG
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhhhccCCCccHHHHHHHHhhhhhhccCCCC-----cccCcccccccccc
Confidence 34667899999999999999999999999999999999999999999999888876 5443 36899999999999
Q ss_pred cccCCCCCCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 181 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 181 ~~Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
.+|+.|++++|++||+|++|+|+.|+||++|++|||++|+++++++++|+++.++++++++++.
T Consensus 217 ~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~ 280 (377)
T 4fkc_A 217 NPHHRPSHRKIRKGDVVIFDYGAKYLGYCSDVTRTVVVGPPSEEVKKVYEIVKEAQETAVQKVA 280 (377)
T ss_dssp CTTCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCTHHHHHHHHHHHHHHHHHHHCB
T ss_pred ccccccccccccccccccccccccccCcccccceeEEEecCCHHHHHhhhhhHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999999998764
No 18
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=99.96 E-value=6.3e-29 Score=231.71 Aligned_cols=136 Identities=16% Similarity=0.201 Sum_probs=129.4
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccc
Q 025641 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (250)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~ 182 (250)
.+..+|+|||++||+.||+|+++++++++.+.+.++||+||.||++.+++.+.++|+.+. +| +++++|.|...+
T Consensus 143 ~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~-----~f-~iv~sG~n~~~~ 216 (378)
T 4ege_A 143 VLRQLRMVKEAAEVDALAKAGAAIDRVHARVPAFLVPGRTEAQVAADIAEAIVAEGHSAV-----AF-VIVGSGPHGADP 216 (378)
T ss_dssp HHHHHHTBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCSEE-----EE-EEEEEGGGGGCT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCC-----Ce-eEEEeeCCCCcc
Confidence 356789999999999999999999999999999999999999999999999999998752 47 789999999999
Q ss_pred cCCCCCCcCCCCCEEEEEEeeEE-CCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 183 HGIPDSRALEDGDTINIDVTVYL-NGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 183 Hg~P~~r~Lq~GDiV~IDvg~~~-~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
|+.|++++|++||+|++|+|+.| +||++|+||||++|+++++++++|+++.++++++++++.
T Consensus 217 H~~~~~~~l~~Gd~v~iD~G~~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~ 279 (378)
T 4ege_A 217 HHGYSDRKLQVGDIVVVDIGGTYEPGYYSDSTRTYSIGDPSPDVAQQYSALQRAQRAAVDAVR 279 (378)
T ss_dssp TCCCCSCBCCTTCEEEEEEEEEETTTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCcCCCCEEEEEEEEEECCeEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999 999999999999999999999999999999999999875
No 19
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=99.96 E-value=1.1e-28 Score=232.39 Aligned_cols=141 Identities=19% Similarity=0.300 Sum_probs=126.3
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCC----CCCCCCceeeecCC
Q 025641 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPL----GYGGFPKSVCTSVN 178 (250)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l----~y~gfp~~V~sg~N 178 (250)
++..+|.|||++||+.||+|+++++++++.+.+.++||+||.||++.+++++.++|+ +.+. .|.+|+..+|+|+|
T Consensus 12 ~v~~~r~iKs~~EI~~mR~A~~i~~~~l~~~~~~ikpGvte~el~~~~~~~i~~~ga-~~~~~~~~~~~g~~f~~~vS~N 90 (401)
T 2q8k_A 12 DEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETG-KIFKKEKEMKKGIAFPTSISVN 90 (401)
T ss_dssp --CCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHCC-CCBHHHHHHHHHHHHHHHHH-TSSTTCTTCCEEEEEEEEEEET
T ss_pred cHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCC-hhhcccccccCCCCCCcEEeCC
Confidence 577899999999999999999999999999999999999999999999999999876 2222 23456667888999
Q ss_pred CccccCCC--C--CCcCCCCCEEEEEEeeEECCEEeceeeEEEcC-----CCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 179 ECICHGIP--D--SRALEDGDTINIDVTVYLNGYHGDTSATFFCG-----DVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 179 ~~~~Hg~P--~--~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG-----~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
+++|||+| + +++|++||+|+||+|+.|+||++|++|||+|| +++++++++|+++++|++++|+++.
T Consensus 91 ~~v~H~~P~~~d~~~~L~~GDiV~ID~G~~~~GY~sD~tRT~~vG~~~eg~~s~~~~~l~~~~~~a~~~~i~~~k 165 (401)
T 2q8k_A 91 NCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVK 165 (401)
T ss_dssp TEEECCCCCTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred cccccCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEECCccCCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999998 5 38999999999999999999999999999999 8999999999999999999999875
No 20
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=99.95 E-value=5.8e-29 Score=231.92 Aligned_cols=142 Identities=13% Similarity=0.131 Sum_probs=128.8
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCC-CCCCCCceeeecCCCcc
Q 025641 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPL-GYGGFPKSVCTSVNECI 181 (250)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l-~y~gfp~~V~sg~N~~~ 181 (250)
.+..+|.|||++||+.||+|+++++++++.+.+.++||+||.||++.+++.+.++|+.+.+. .+.++++++++|.|+.+
T Consensus 150 ~i~~lR~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~iv~~g~n~~~ 229 (402)
T 1kp0_A 150 PVMWZRVIKSSEEZBLIRZGARISDIGGAATAAAISAGVPEYEVAIATTBAMVRZIARBFPYVELMDTWIWFQSGINTDG 229 (402)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEEEEGGGGGS
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhcccccCcccccCccceeeccccccc
Confidence 35677999999999999999999999999999999999999999999999999887643211 12234457899999999
Q ss_pred ccCCCCCCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 182 CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 182 ~Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
+|+.|++++|++||+|++|+|+.|+||++|+||||++|+++++++++|+++++++++++++++
T Consensus 230 ~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~ 292 (402)
T 1kp0_A 230 AHNPVTBRVVZRGDILSLNCFPMIFGYYTALERTLFLZZVBDASLZIWZKNTAVHRRGLZLIK 292 (402)
T ss_dssp TTCCEECCBCCTTCEEEEEEEEEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccCCCCCcccCCCCEEEEEEEeeECCEeeecEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999986
No 21
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=99.95 E-value=3.8e-28 Score=225.60 Aligned_cols=136 Identities=18% Similarity=0.128 Sum_probs=123.6
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccc
Q 025641 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (250)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~ 182 (250)
...++|.+|+++||+.||+|++|++++++++.+.|+||+||.||++.+++++.+.|+.+.+.+| +|| +|+|+|+.++
T Consensus 32 ~~~~~~~~~~~d~l~~~R~Aa~I~~~v~~~~~~~ikpG~t~~el~~~~e~~i~~~~~~~~~~g~-~FP--~ciSvN~~v~ 108 (358)
T 3fm3_A 32 RNMEIENFTESDILQDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGERNNGI-GFP--AGMSMNSCAA 108 (358)
T ss_dssp TSCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSGGGGE-EEE--EEEEETTEEE
T ss_pred hHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHhcCCCcccCC-CCC--cEEeeCCEEE
Confidence 4567899999999999999999999999999999999999999999999999999998876655 787 6889999999
Q ss_pred cCCC----CCCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 183 HGIP----DSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 183 Hg~P----~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
||+| ++++|++||+|+||+|+.++||++|++|||.||+.. .++++++.+|+++||+++.
T Consensus 109 Hg~P~~~~~~~~L~~GDiV~ID~G~~~dGY~sD~arT~~vg~~~---~~l~~~~~~al~aai~~~~ 171 (358)
T 3fm3_A 109 HYTVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFKENL---EPLLVAAREGTETGIKSLG 171 (358)
T ss_dssp CCCCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCGGG---HHHHHHHHHHHHHHHHHCC
T ss_pred ecCCCCCCCCeEecCCCEEEEEeeEEECCEEEEEEEeccccccc---hhHHHHHHHHHHHHHHhhh
Confidence 9999 478999999999999999999999999999998644 4677889999999998764
No 22
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=99.95 E-value=9e-28 Score=231.12 Aligned_cols=137 Identities=15% Similarity=0.223 Sum_probs=127.6
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHC-CCCCCCCCCCCCCceeeecCCCcc
Q 025641 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN-GAYPSPLGYGGFPKSVCTSVNECI 181 (250)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~-Ga~ps~l~y~gfp~~V~sg~N~~~ 181 (250)
.+..+|.|||++||+.||+|++++.+++.++++.++||+||.||++.++..+.++ |+.. .+|+++|++|.|.++
T Consensus 180 ~l~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~~G~~~-----~~~~~iv~sG~n~~~ 254 (494)
T 2iw2_A 180 EIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRH-----SSYTCICGSGENSAV 254 (494)
T ss_dssp HHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHCCCE-----ESSCCEEEEGGGGGC
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhCCCCc-----CCCCceEEEcCcccc
Confidence 3567899999999999999999999999999999999999999999999888876 7753 258999999999999
Q ss_pred ccC----CCCCCcCCCCCEEEEEEeeEECCEEeceeeEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 182 CHG----IPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 182 ~Hg----~P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~V-G~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
+|+ .|++++|++||+|++|+|+.|+||++|+||||+| |+++++++++|+++.++++++++++.
T Consensus 255 ~Hy~~~g~p~~~~l~~Gd~vliD~G~~~~gY~sDitRT~~v~G~~s~~q~~~y~~v~~a~~~~i~~~k 322 (494)
T 2iw2_A 255 LHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMK 322 (494)
T ss_dssp SSCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccccccCCCCCCccCCCCEEEEEeeEEECCEEEEeeEEEEECCcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 995 6679999999999999999999999999999999 99999999999999999999999875
No 23
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=99.95 E-value=2.1e-27 Score=226.56 Aligned_cols=135 Identities=17% Similarity=0.154 Sum_probs=122.6
Q ss_pred CCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccc
Q 025641 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (250)
Q Consensus 104 ~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~H 183 (250)
+.++|.|||++||+.||+|+++++++++.+++.++||+||.||++.+...+ ..|.. +.+|+++||+|.|++++|
T Consensus 153 l~~lR~iKs~~EI~~mr~A~~ia~~a~~~~~~~i~pG~tE~el~~~~~~~~-~~g~~-----~~~f~~IVasG~naa~~H 226 (451)
T 3rva_A 153 LHYQRAYKTDYELDCMREANKLAVAGHKAAEQAFREGKSEFDINLAYAAAS-RQGDN-----DVPYTSIVALNEHASILH 226 (451)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH-TCCTT-----TSSSCCEEEEGGGGGCTT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHH-HcCCC-----cCCcCcEEEECCcccccC
Confidence 557899999999999999999999999999999999999999998876543 34442 136999999999999999
Q ss_pred CCCCCCc-CCCCCEEEEEEeeEECCEEeceeeEEEcCCC--CHHHHHHHHHHHHHHHHHHHHhc
Q 025641 184 GIPDSRA-LEDGDTINIDVTVYLNGYHGDTSATFFCGDV--DDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 184 g~P~~r~-Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~--~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
+.|+++. +++||+|+||+|+.|+||++|+||||++|++ +++++++|+++++|++++++++.
T Consensus 227 ~~~~~~~~l~~GdlVliD~G~~~~GY~sDiTRT~~vG~~~~~~~~~~ly~~vl~aq~aai~~ik 290 (451)
T 3rva_A 227 YMQCDTVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSLK 290 (451)
T ss_dssp CCCCCSSCCSSCCEEEEEEEEEETTEEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCcccCCCCEEEEEeeEEECCEEEEeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999875 6999999999999999999999999999997 78999999999999999999875
No 24
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=99.95 E-value=7.3e-28 Score=225.38 Aligned_cols=142 Identities=13% Similarity=0.060 Sum_probs=128.0
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCc--eeeecCCCc
Q 025641 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPK--SVCTSVNEC 180 (250)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~--~V~sg~N~~ 180 (250)
.+..+|+|||++||+.||+|+++++.+++.+.+.++||+||.||++.+++.+.+.|+...+. +..|++ ++++|.|..
T Consensus 150 ~i~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~n~~ 228 (401)
T 1chm_A 150 ACMRMRMIKSAEEHVMIRHGARIADIGGAAVVEALGDQVPEYEVALHATQAMVRAIADTFED-VELMDTWTWFQSGINTD 228 (401)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHCSS-CCBCCCEEEEEEGGGGG
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhccccCCC-ccccCcceeeeeccccc
Confidence 45678999999999999999999999999999999999999999999999888776532211 123565 478999999
Q ss_pred cccCCCCCCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcc
Q 025641 181 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCFL 245 (250)
Q Consensus 181 ~~Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~~ 245 (250)
.+|+.|++++|++||+|++|+|+.|+||++|+||||++|+++++++++|+++++++++++++++-
T Consensus 229 ~~H~~~~~~~l~~gd~v~iD~G~~~~gY~sD~tRT~~~G~~~~~~~~~y~~v~~a~~~~i~~~~p 293 (401)
T 1chm_A 229 GAHNPVTTRKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHEAGLKLIKP 293 (401)
T ss_dssp STTCCEESCBCCTTCEEEEEEECEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred ccccCCCCCccCCCCEEEEEEEEeeCCEeecceEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999874
No 25
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=99.94 E-value=7.1e-27 Score=224.01 Aligned_cols=136 Identities=10% Similarity=0.095 Sum_probs=128.8
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-----CHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecC
Q 025641 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGI-----TTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSV 177 (250)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGv-----Te~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~ 177 (250)
.+..+|+|||++||+.||+|+++++.+++.+.+.++||+ ||.||++.++..+.+.|++++ |++++++|.
T Consensus 222 ~v~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~~~~~~tE~el~~~l~~~~~~~G~~~~------~~~ivasG~ 295 (470)
T 4b28_A 222 VTEKARSVKGPDEIRAMRCASHACEVAVRKMEDFARSKVGDGVTCENDIWAILHSENVRRGGEWI------ETRLLASGP 295 (470)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCBHHHHHHHHHHHHHTTTCCEE------SCCCEEEGG
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcC------CCceeEEcC
Confidence 456889999999999999999999999999999999999 999999999999999998753 678899999
Q ss_pred CCccccCCCCCCcCCCCCEEEEEEeeE-ECCEEeceeeEEEcC--CCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 178 NECICHGIPDSRALEDGDTINIDVTVY-LNGYHGDTSATFFCG--DVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 178 N~~~~Hg~P~~r~Lq~GDiV~IDvg~~-~~GY~aD~sRT~~VG--~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
|...+|+.|++++|++||+|++|+|+. ++||++|+||||++| +++++++++|+++++|++++++++.
T Consensus 296 n~~~~H~~~~~~~l~~Gd~vliD~G~~g~~GY~sDitRT~~vG~~~~s~~~~~~y~~v~~a~~a~i~~ik 365 (470)
T 4b28_A 296 RSNPWFQECGPRVCQRNEIISFDTDLVGAYGICTDISRSWWIGDQKPRADMIYAMQHGVEHIRTNMEMLK 365 (470)
T ss_dssp GGSSTTCCCCSCBCCSSEEEEEECCEECGGGCEECCEEEEEESSSCCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ccccCCCCCCCccccCCCEEEEEecccccCeEEEeeEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999998 899999999999999 6999999999999999999999875
No 26
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=99.94 E-value=1.5e-26 Score=223.88 Aligned_cols=134 Identities=19% Similarity=0.113 Sum_probs=120.6
Q ss_pred CCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccc
Q 025641 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (250)
Q Consensus 104 ~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~H 183 (250)
+.++|.|||++||+.||+|+++++++++.+.+.++||+||.||++.+...+ ..|.. +.+|+++||+|.|++++|
T Consensus 153 l~~lR~iKs~~EIe~mR~A~~ia~~a~~~~~~~ikpG~tE~el~~~~~~~~-~~g~~-----~~sf~~IVasG~naa~~H 226 (517)
T 3l24_A 153 YHYHRAYKTQYELACMREANKIAVQGHKAARDAFFQGKSEFEIQQAYLLAT-QHSEN-----DNPYGNIVALNENCAILH 226 (517)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH-TCCGG-----GSSSCCEEEEGGGGGCTT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH-HcCCC-----cCCcCCEEEEcccccccc
Confidence 557899999999999999999999999999999999999999998876544 34432 236999999999999999
Q ss_pred CCCCCCc-CCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 184 GIPDSRA-LEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 184 g~P~~r~-Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
+.|+++. +++||+|+||+|+.|+||++|+||||++|++ ++++++|+++.+|++++++++.
T Consensus 227 ~~p~~~~~l~~GDlVliD~G~~~~GY~sDiTRT~~vG~~-~e~~~ly~~vl~Aq~aai~~ik 287 (517)
T 3l24_A 227 YTHFDRVAPATHRSFLIDAGANFNGYAADITRTYDFTGE-GEFAELVATMKQHQIALMNQLA 287 (517)
T ss_dssp CCCCCSSCCSSCCEEEEEEEEEETTEEEEEEEEEESSSC-SHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCccccCCCEEEEeecEEECCEEEEeEEEEEcCCC-HHHHHHHHHHHHHHHHHHHHcC
Confidence 9999875 7999999999999999999999999999975 7889999999999999999874
No 27
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=99.93 E-value=1.2e-26 Score=220.68 Aligned_cols=138 Identities=14% Similarity=0.071 Sum_probs=126.5
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHhhcC------CCCHHHHHHHHHHHHHH-----CC-------------
Q 025641 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKP------GITTDEIDKAVHQMIID-----NG------------- 158 (250)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I~p------GvTe~EI~~~v~~~i~~-----~G------------- 158 (250)
.+..+|+|||++||+.||+|+++++.++..+.+.++| |+||.||++.++..+.+ +|
T Consensus 170 ~i~~lr~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~~i~~g~g~te~el~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 249 (467)
T 3biq_A 170 GLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKITNAKLSDKIENKIDDVKFLKQLSPDLSALCPPNYK 249 (467)
T ss_dssp HHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBHHHHHHHHHHGGGCHHHHHHHHHHHHTTSCTTCC
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCccHHHHHHHHHHHHHhhhhhhcCCcccccccccccc
Confidence 4667899999999999999999999999999999998 99999999999998887 55
Q ss_pred CCCCCCCCCCCCceeeecCCCc-cccCCCCCCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHH
Q 025641 159 AYPSPLGYGGFPKSVCTSVNEC-ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFK 237 (250)
Q Consensus 159 a~ps~l~y~gfp~~V~sg~N~~-~~Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~ 237 (250)
+.+... ..+|+++|++|.|.. ++|+.|++++|++||+|++|+|+.|+||++|++|||++| ++++++++|++++++++
T Consensus 250 ~~~~~~-~~~f~~iv~~G~n~~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~g-~~~~~~~~~~~v~~a~~ 327 (467)
T 3biq_A 250 FNFDLL-DWTYSPIIQSGKKFDLRVSARSTNDQLYGNGCILASCGIRYNNYCSNITRTFLID-PSEEMANNYDFLLTLQK 327 (467)
T ss_dssp CCGGGE-EESSCCEEECTTCCCCSTTCCCCSSBCCCSEEEEEEECEEETTEECCEEEEEEES-CCHHHHHHHHHHHHHHH
T ss_pred CCcccc-cCCCCCeEEecCCcceeeccCCCCCccCCCCEEEEEEeEEECCEEeeeeEEEEeC-CCHHHHHHHHHHHHHHH
Confidence 432211 246999999999998 999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHH
Q 025641 238 LHRVL 242 (250)
Q Consensus 238 aaia~ 242 (250)
+++++
T Consensus 328 ~~~~~ 332 (467)
T 3biq_A 328 EIVTN 332 (467)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99998
No 28
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=99.93 E-value=2.8e-26 Score=216.53 Aligned_cols=140 Identities=16% Similarity=0.209 Sum_probs=122.9
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHH-HHH----HhhcCC--CCHHHHHHHHHHHHHHC--------CC--CCCCCC
Q 025641 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLE-YAG----TLVKPG--ITTDEIDKAVHQMIIDN--------GA--YPSPLG 165 (250)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~A~~ia~~~l~-~a~----~~I~pG--vTe~EI~~~v~~~i~~~--------Ga--~ps~l~ 165 (250)
.+..+|+|||++||+.||+|+++++.++. .+. +.++|| +||.||++.++..+.+. |+ .+....
T Consensus 170 ~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~~~~~~i~~G~~~te~el~~~~~~~~~~~~~~~g~~~ga~~~~~~~~ 249 (444)
T 3cb6_A 170 GLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYIDQGKKITHSKFSDQMESLIDNEAFFQTKSLKLGDIDLDQL 249 (444)
T ss_dssp HHHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCBHHHHHHHHHGGGGCHHHHTCGGGCCTTCCGGGE
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCHHHHHHHHHHHHHHhcccccccccccccccccc
Confidence 46678999999999999999999999999 554 788999 99999999999988752 32 110011
Q ss_pred CCCCCceeeecCCCc-cccCCCCCCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 166 YGGFPKSVCTSVNEC-ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 166 y~gfp~~V~sg~N~~-~~Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
+.+|++++|+|.|.. ++|+.|++++|+ ||+|++|+|+.|+||++|+||||++| ++++++++|++++++++++++++.
T Consensus 250 ~~~f~~iv~~g~n~~~~~H~~~~~~~l~-gd~v~iD~g~~~~gy~sD~tRT~~v~-~~~~~~~~y~~v~~a~~~~~~~~~ 327 (444)
T 3cb6_A 250 EWCYTPIIQSGGSYDLKPSAITDDRNLH-GDVVLCSLGFRYKSYCSNVGRTYLFD-PDSEQQKNYSFLVALQKKLFEYCR 327 (444)
T ss_dssp EESSCCEEECTTCCCCSTTCCCCSSBCC-SSEEEEEECEEETTEECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred ccccCceEeccCCcCceeccCCCCCccc-CCEEEEEEeEeeCCEeeeeeEEEEec-CCHHHHHHHHHHHHHHHHHHHHcC
Confidence 246999999999998 999999999998 99999999999999999999999998 899999999999999999999873
No 29
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=99.93 E-value=1.1e-25 Score=203.81 Aligned_cols=120 Identities=29% Similarity=0.441 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCCC---CCc
Q 025641 114 KGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRA 190 (250)
Q Consensus 114 eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P~---~r~ 190 (250)
+||+.||+|+++++++++.+.+.++||+||.||++.+++.+.++|++| +||++ +|.|+.++|++|+ +++
T Consensus 1 eEI~~mr~A~~i~~~~l~~~~~~i~pG~te~el~~~~~~~~~~~G~~~------~fp~~--vs~n~~~~H~~p~~~~~~~ 72 (295)
T 1xgs_A 1 MDTEKLMKAGEIAKKVREKAIKLARPGMLLLELAESIEKMIMELGGKP------AFPVN--LSINEIAAHYTPYKGDTTV 72 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEE------SSCCE--EEETTEEECCCCCTTCCCB
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHcCCCC------CCCcE--EeeCCccccccCCCCCCcc
Confidence 589999999999999999999999999999999999999999999986 48854 4689999999996 799
Q ss_pred CCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 191 LEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 191 Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
|++||+|+||+|+.|+||++|++|||+||+ +++++|+++++|++++|+++.
T Consensus 73 L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~---~~~~l~~~~~~a~~~~i~~~k 123 (295)
T 1xgs_A 73 LKEGDYLKIDVGVHIDGFIADTAVTVRVGM---EEDELMEAAKEALNAAISVAR 123 (295)
T ss_dssp CCTTCEEEEEEEEEETTEEEEEEEEEETTS---CCCHHHHHHHHHHHHHHHHCS
T ss_pred ccCCCEEEEEEeEEECCEEEEEEEEEEeCH---HHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999997 788999999999999999875
No 30
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=99.92 E-value=2.1e-25 Score=207.42 Aligned_cols=128 Identities=18% Similarity=0.141 Sum_probs=117.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCCC---
Q 025641 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD--- 187 (250)
Q Consensus 111 Ks~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P~--- 187 (250)
.|++||+.||+|+++++++++++.+.++||+||.||++.+++.+.+.|+.+. ..+.+||++ +|.|++++|+.|+
T Consensus 42 ~s~~EI~~mR~A~~I~~~a~~~~~~~ikpG~te~El~~~ie~~~~~~g~~~~-~~~~aFpt~--~s~N~~~~H~~P~~~d 118 (360)
T 2nw5_A 42 TESDILQDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGER-NNGIGFPAG--MSMNSCAAHYTVNPGE 118 (360)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSG-GGGEEEEEE--EEETTEEECCCCCTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhcCCCc-cCccccCce--eeccccccCCCCCccc
Confidence 3999999999999999999999999999999999999999999999988654 344578865 5899999999998
Q ss_pred -CCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 188 -SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 188 -~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
+++|++||+|+||+|+.++||++|++|||+++ ++++++++++++|+++||+++.
T Consensus 119 ~~~~L~~GDlV~ID~G~~~~GY~sD~tRT~~v~---~~~~~l~~av~eA~~aai~~~k 173 (360)
T 2nw5_A 119 QDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFK---ENLEPLLVAAREGTETGIKSLG 173 (360)
T ss_dssp CCCBCCTTCEEEEEEEEEETTEEEEEEEEEECC---GGGHHHHHHHHHHHHHHHHHCC
T ss_pred CCcCcCCCCEEEEEEEEEECCEEEEEEEEEEcC---HHHHHHHHHHHHHHHHHHHHhc
Confidence 78999999999999999999999999999994 6899999999999999999864
No 31
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=99.91 E-value=3.6e-24 Score=211.36 Aligned_cols=141 Identities=18% Similarity=0.074 Sum_probs=124.9
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHH----hh-cCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecC
Q 025641 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGT----LV-KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSV 177 (250)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~A~~ia~~~l~~a~~----~I-~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~ 177 (250)
.+..+|+|||++||+.||+|++++..++..++. .+ +||+||.|+++.++.+..+.+... ..+|++++++|.
T Consensus 314 ~i~~~R~iK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~g~tE~el~~~l~~~~~~~~g~~----~~sf~~iv~~G~ 389 (623)
T 3ctz_A 314 PICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQADFV----DLSFPTISSTGP 389 (623)
T ss_dssp HHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCBHHHHHHHHHHHHHTSTTEE----EESSCCEEEEGG
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhcCCCc----CCCCCceeeecC
Confidence 466789999999999999999999998877664 46 899999999999988766543211 125999999999
Q ss_pred CCccccCCCC---CCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcccc
Q 025641 178 NECICHGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCFLFI 247 (250)
Q Consensus 178 N~~~~Hg~P~---~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~~~~ 247 (250)
|.+++|+.|+ +++|++||+|++|+|+.|+||++|+||||++|+++++++++|+++.+++++++++++--|
T Consensus 390 n~a~~H~~~~~~~~~~l~~gd~vliD~G~~y~gy~sDiTRT~~vG~~s~~~~~~y~~vl~a~~~~~~~~~p~G 462 (623)
T 3ctz_A 390 TGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKGHIAVSAAVFPTG 462 (623)
T ss_dssp GGGCTTCCCCGGGCCBCCTTSCEEEEECEEETTEECCEEEEECSSCCCHHHHHHHHHHHHHHHHHHTCCEETT
T ss_pred ccccccCCCCCCCCcccCCCCEEEEEEeEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhCcCC
Confidence 9999999996 899999999999999999999999999999999999999999999999999999988644
No 32
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=99.90 E-value=4.5e-24 Score=204.73 Aligned_cols=130 Identities=24% Similarity=0.255 Sum_probs=113.8
Q ss_pred CCCcc--cCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHH----CCCCCCCCCCCCCCceeeecCCC
Q 025641 106 SGPEV--HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIID----NGAYPSPLGYGGFPKSVCTSVNE 179 (250)
Q Consensus 106 ~~R~V--Ks~eEIe~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~----~Ga~ps~l~y~gfp~~V~sg~N~ 179 (250)
++|.+ ||++||+.||+|++++.++++.+.+.++||+||.||++.+++.+.+ +|+.. + .+||+++ |.|+
T Consensus 154 elR~i~iKs~~EIe~mR~A~~Ia~~al~~~~~~ikpGvTe~ELa~~le~~~~~~i~~~Ga~~---g-~~FP~iv--SvN~ 227 (478)
T 1b6a_A 154 EKKALDQASEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNA---G-LAFPTGC--SLNN 227 (478)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHCCTTSBHHHHHHHHHHHHHHHHTCBTTTE---E-EEEEEEE--EETT
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHHHHhcCCcc---c-CCCCeEE--ECCC
Confidence 34554 9999999999999999999999999999999999998777776654 47631 1 2688654 5699
Q ss_pred ccccCCCC---CCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 025641 180 CICHGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVVCWNFKLHRVLCF 244 (250)
Q Consensus 180 ~~~Hg~P~---~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~~~e~~~l~~~~~eA~~aaia~~~ 244 (250)
.++|++|+ +++|++||+|+||+|+.|+||++|++|||+|| ++++++|+++++|++++|+++.
T Consensus 228 ~v~Hg~P~~~d~r~Lk~GDiV~ID~G~~~dGY~sD~tRT~~Vg---~e~~~L~eav~eA~~aaI~~~k 292 (478)
T 1b6a_A 228 CAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFN---PKYDTLLKAVKDATNTGIKCAG 292 (478)
T ss_dssp EEECCCCCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECSS---GGGHHHHHHHHHHHHHHHHHCC
T ss_pred ccccCCCCcccCccccCCCeEEEEEEEEECCEEEEEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhc
Confidence 99999997 58999999999999999999999999999996 6899999999999999999874
No 33
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=99.63 E-value=4.1e-15 Score=145.05 Aligned_cols=137 Identities=18% Similarity=0.276 Sum_probs=113.1
Q ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHHHHhh---------cCCCCHHHHHHHHHHHHHHCC--CCCCCCCCCCCCceeee
Q 025641 107 GPEVHDEKGIECMRVSGRLAAQVLEYAGTLV---------KPGITTDEIDKAVHQMIIDNG--AYPSPLGYGGFPKSVCT 175 (250)
Q Consensus 107 ~R~VKs~eEIe~mR~A~~ia~~~l~~a~~~I---------~pGvTe~EI~~~v~~~i~~~G--a~ps~l~y~gfp~~V~s 175 (250)
-.-|-+++-++++|.|++|+.++++++.+.+ +||++..||+...+.++.+.+ +|.......|+...+|+
T Consensus 37 ekniln~dvltKYr~AgeIa~~vLk~v~~li~~G~~~~~~kpga~I~ELCe~GD~~I~e~~akvyk~K~~~KGIAFPT~I 116 (614)
T 4b6a_t 37 DKNILQESVLNKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPELCLLTDSFILTRLEQYYKNKVNERGIAIPTTI 116 (614)
T ss_dssp CSSSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTCCCBTTHHHHHHHHHHHHHHHTSSTTCSCCEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCCcHHHHHHHHHHHHHHHHHhhhcCCcccCCCccCcee
Confidence 3568889999999999999999999999876 566888999999999888754 45544444444444788
Q ss_pred cCCCccccCCCC----------------------CCcCCCCCEEEEEEeeEECCEEeceeeEEEcCCC------------
Q 025641 176 SVNECICHGIPD----------------------SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDV------------ 221 (250)
Q Consensus 176 g~N~~~~Hg~P~----------------------~r~Lq~GDiV~IDvg~~~~GY~aD~sRT~~VG~~------------ 221 (250)
|+|++++|+.|. +..|++||+|.||+|+..|||.+|++.|++||..
T Consensus 117 SvN~~vaHysP~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDGyiadvA~Tvvvg~~~~~~~~~~~~~p 196 (614)
T 4b6a_t 117 DIDQISGGWCPEIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDGYTSEVSHTMVIYPVDETKPILQPTGP 196 (614)
T ss_dssp EETTEEECCCCCTTS------------------CCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCCCTTTSTTTTTTSC
T ss_pred cHHHcccCCCCCCcchhhcccccccccccccccccccccCCCEEEEEeeEEECCeEEEEEEEEEECCccccccccccccc
Confidence 999999999984 2479999999999999999999999999999853
Q ss_pred -CHHHHHHHHHHHHHHHHHHHHh
Q 025641 222 -DDEARNLVKVVCWNFKLHRVLC 243 (250)
Q Consensus 222 -~~e~~~l~~~~~eA~~aaia~~ 243 (250)
.....++..+++.|.++|+.++
T Consensus 197 vtGrkADli~AA~~A~EaalrLl 219 (614)
T 4b6a_t 197 LLGGKADAVAAAHIAMETVVALL 219 (614)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccchhhhHHHHHHHHHHHHHHHH
Confidence 3445678899999999988765
No 34
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=97.19 E-value=0.0026 Score=57.68 Aligned_cols=100 Identities=14% Similarity=0.126 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCC-CCCcCCCCCE
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDT 196 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P-~~r~Lq~GDi 196 (250)
.++++.+++.++++.+.+.++||++-.||+..+++.+.+.|..+.. . ++..+.|....++ .|.-.+ ++.+|++|++
T Consensus 239 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~~-~-h~~GHgiGl~~he-~p~i~~~~~~~l~~Gmv 315 (356)
T 3q6d_A 239 KLKEIYNIVLEAQLRGVNGIKAGLTGREADALTRDYITEKGYGEYF-G-HSTGHGIGLEIHE-APGLAFRSDTVLEPGMA 315 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGC-C-SCSEEECSSSSSE-EEEESTTCCCBCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccC-C-CCCcccCCCCcCc-CCCCCCCCCCCcCCCCE
Confidence 3567778888999999999999999999999999999999863311 0 1112222211212 111112 4678999999
Q ss_pred EEEEEeeEECC-EEeceeeEEEcCC
Q 025641 197 INIDVTVYLNG-YHGDTSATFFCGD 220 (250)
Q Consensus 197 V~IDvg~~~~G-Y~aD~sRT~~VG~ 220 (250)
+.++.+.+..| +-.-+.-|++|.+
T Consensus 316 ~tiEPgiy~~g~~gvriEd~v~vt~ 340 (356)
T 3q6d_A 316 VTVEPGIYIPGIGGVRIEDDIIVTS 340 (356)
T ss_dssp EEECCEEEETTTEEEECBEEEEECS
T ss_pred EEECCEEEECCCCeEEEccEEEEeC
Confidence 99999999877 4556788888853
No 35
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=97.05 E-value=0.0036 Score=57.68 Aligned_cols=99 Identities=16% Similarity=0.193 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCC-CCCcCCCCCE
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDT 196 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P-~~r~Lq~GDi 196 (250)
.++++.+++.++++.+.+.++||++-.||+..+++.+.+.|...... ++....|.....+. |.-.+ ++.+|++|++
T Consensus 259 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~--h~~GHgiGl~~hE~-P~i~~~~~~~L~~Gmv 335 (378)
T 4ege_A 259 DVAQQYSALQRAQRAAVDAVRPGVTAAQVDAAARDVLADAGLAEYFV--HRTGHGIGLCVHEE-PYIVAGNELPLVAGMA 335 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGCC--SCSEEECSSSSSEE-EEECTTCCCBCCTTBE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCcCC--CCCcccCCCCcCCC-CccCCCCCCccCCCCE
Confidence 35777888889999999999999999999999999999998533110 11122222222211 11122 4679999999
Q ss_pred EEEEEeeEECC-EEeceeeEEEcC
Q 025641 197 INIDVTVYLNG-YHGDTSATFFCG 219 (250)
Q Consensus 197 V~IDvg~~~~G-Y~aD~sRT~~VG 219 (250)
+.++-+.+..| +-.-+.-|++|.
T Consensus 336 ~tiEPgiy~~g~~gvriEd~v~Vt 359 (378)
T 4ege_A 336 FSIEPGIYFPGRWGARIEDIVVVT 359 (378)
T ss_dssp EEECCEEEETTTEEEECBEEEEEE
T ss_pred EEECCEEEeCCccEEEEeeEEEEe
Confidence 99999999876 456678888884
No 36
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=96.99 E-value=0.0041 Score=56.17 Aligned_cols=99 Identities=14% Similarity=0.133 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCC-CCCcCCCCCE
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDT 196 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P-~~r~Lq~GDi 196 (250)
..|++.+++.++++.+.+.++||++-.||+..+++.+.+.|...... ++....+.....+ .|.-.+ ++.+|++|.+
T Consensus 242 ~~~~~~~~v~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~--h~~GHgiGl~~he-~p~i~~~~~~~l~~gmv 318 (359)
T 2zsg_A 242 EVKEVHSIVLEAQERALKIAKAGVTGKLLDSVAREFIREKGYGEFFG--HSLGHGIGLEVHE-GPAISFRNDSPLPENVV 318 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGBC--SCSEEECSSSSSE-EEEESTTCCCBCCTTBE
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCcccCC--CCCccccCcccCC-CCCcCCCCCCCcCCCCE
Confidence 35778888899999999999999999999999999999998632100 1112222211212 121112 4678999999
Q ss_pred EEEEEeeEECC-EEeceeeEEEcC
Q 025641 197 INIDVTVYLNG-YHGDTSATFFCG 219 (250)
Q Consensus 197 V~IDvg~~~~G-Y~aD~sRT~~VG 219 (250)
+.+.-+.+..| +-.-+.-|++|.
T Consensus 319 ~tiEPgiy~~~~~gvriEd~v~vt 342 (359)
T 2zsg_A 319 FTVEPGIYLEGKFGIRIEEDVVLK 342 (359)
T ss_dssp EEECCEEEETTTEEEECBEEEEEE
T ss_pred EEECCEEEECCCcEEEEeeEEEEc
Confidence 99999999877 455677788874
No 37
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=96.97 E-value=0.0052 Score=55.87 Aligned_cols=99 Identities=20% Similarity=0.180 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCC-CCCcCCCCCE
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDT 196 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P-~~r~Lq~GDi 196 (250)
..|++.+++.++++.+.+.++||++-.||+..+++.+.+.|...... ++....+.....+ .|.-.+ ++.+|++|++
T Consensus 236 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~--h~~GHgiGl~~hE-~p~i~~~~~~~l~~Gmv 312 (351)
T 1wy2_A 236 KQKEIYEIVLEAQKKAVESAKPGITAKELDSIARNIIAEYGYGEYFN--HSLGHGVGLEVHE-WPRVSQYDETVLREGMV 312 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGCC--SCSEEECSSSSSE-EEEESTTCCCBCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcccCC--CCcccccCCCcCC-CCccCCCCCCCcCCCCE
Confidence 35677888899999999999999999999999999999988532110 1122222222222 121112 4678999999
Q ss_pred EEEEEeeEECC-EEeceeeEEEcC
Q 025641 197 INIDVTVYLNG-YHGDTSATFFCG 219 (250)
Q Consensus 197 V~IDvg~~~~G-Y~aD~sRT~~VG 219 (250)
+.++-+.+..| +-.-+.-|++|.
T Consensus 313 ~tiEPgiy~~g~~gvriEd~v~Vt 336 (351)
T 1wy2_A 313 ITIEPGIYIPKIGGVRIEDTILIT 336 (351)
T ss_dssp EEECCEEEETTTEEEECBEEEEEE
T ss_pred EEECCEEEeCCCCeEEEeeEEEEC
Confidence 99999999865 445666777763
No 38
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=96.97 E-value=0.004 Score=54.29 Aligned_cols=85 Identities=9% Similarity=0.064 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC--ccccC-CC-CCCcCCC
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHG-IP-DSRALED 193 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~--~~~Hg-~P-~~r~Lq~ 193 (250)
..+++.+++.++++.+.+.++||++-.||+..+++.+.+.|..... . .....+.....+ .++|. .+ ++.+|++
T Consensus 122 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~-~--~~GHgiG~~~hE~p~i~~~~~~~~~~~L~~ 198 (262)
T 3mx6_A 122 KPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNYSVVR-D--YTGHGIGRVFHDKPSILNYGRNGTGLTLKE 198 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSTTCBHHHHHHHHHHHHHHTTCEECC-S--CCEEECSSSSSEEEEECSSCCTTCSCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCC-C--ccccccCCcccCCCcccccCCCCCCCEeCC
Confidence 3566778888899999999999999999999999999998864311 1 112223222222 13332 23 4678999
Q ss_pred CCEEEEEEeeEE
Q 025641 194 GDTINIDVTVYL 205 (250)
Q Consensus 194 GDiV~IDvg~~~ 205 (250)
|+++.|+-+.+.
T Consensus 199 Gmv~tiEPgiy~ 210 (262)
T 3mx6_A 199 GMFFTVEPMINA 210 (262)
T ss_dssp TCEEEECCEEES
T ss_pred CCEEEEeCEEEc
Confidence 999999999875
No 39
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=96.93 E-value=0.0053 Score=55.92 Aligned_cols=99 Identities=17% Similarity=0.135 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCC-CCCcCCCCCE
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDT 196 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P-~~r~Lq~GDi 196 (250)
..|++.+++.++++.+.+.++||++-.||+..+++.+.+.|...... ++....+.....+. |...+ ++.+|++|++
T Consensus 239 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~~~--h~~GHgiGl~~he~-p~i~~~~~~~l~~Gmv 315 (356)
T 1wn1_A 239 RLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAREVISKAGYGEYFI--HRTGHGLGLDVHEE-PYIGPDGEVILKNGMT 315 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTSBHHHHHHHHHHHHHTTTCGGGCC--SCSEEECSSSSSEE-EEESTTCCCBCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCC--CCCcccCCCccCCC-cccCCCCCCCcCCCCE
Confidence 35777888889999999999999999999999999999988633110 11122222222221 22122 4679999999
Q ss_pred EEEEEeeEECC-EEeceeeEEEcC
Q 025641 197 INIDVTVYLNG-YHGDTSATFFCG 219 (250)
Q Consensus 197 V~IDvg~~~~G-Y~aD~sRT~~VG 219 (250)
+.++-+.+..| +-.-+.-|++|.
T Consensus 316 ~tiEPgiy~~g~~gvriEd~v~Vt 339 (356)
T 1wn1_A 316 FTIEPGIYVPGLGGVRIEDDIVVD 339 (356)
T ss_dssp EEECCEEEETTTEEEECBEEEEEE
T ss_pred EEECCeeEeCCCcEEEEeeEEEEe
Confidence 99999998855 556677888884
No 40
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=96.83 E-value=0.004 Score=55.19 Aligned_cols=85 Identities=18% Similarity=0.121 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCc--cccC-CC-CCCcCCC
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHG-IP-DSRALED 193 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~--~~Hg-~P-~~r~Lq~ 193 (250)
.++++.+++.++++.+.+.++||++-.||+..+.+.+.+.|.... .. .....+.....+. +.|. .+ ++.+|++
T Consensus 155 ~~~~~~~~v~~a~~~~i~~~kpG~~~~di~~~~~~~~~~~G~~~~-~~--~~GHgiG~~~hE~P~i~~~~~~~~~~~L~~ 231 (285)
T 3pka_A 155 EHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVV-RD--FTGHGIGTTFHNGLVVLHYDQPAVETIMQP 231 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSBTTHHHHHHHHHHHTTTCEEC-CS--SCEEBCSSSSSCSCEECSSCCTTCCCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHcCCccC-CC--cccccCCCcccCCCcccCccCCCCCCccCC
Confidence 456778888899999999999999999999999999999886431 11 1122222222221 2222 12 4678999
Q ss_pred CCEEEEEEeeEE
Q 025641 194 GDTINIDVTVYL 205 (250)
Q Consensus 194 GDiV~IDvg~~~ 205 (250)
|+++.|+.+.+.
T Consensus 232 Gmv~tiEPgiy~ 243 (285)
T 3pka_A 232 GMTFTIEPMINL 243 (285)
T ss_dssp TBEEEECCEEES
T ss_pred CCEEEEcCEEEc
Confidence 999999999876
No 41
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=96.82 E-value=0.0044 Score=54.04 Aligned_cols=85 Identities=22% Similarity=0.244 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC--ccccC-CC-CCCcCCC
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHG-IP-DSRALED 193 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~--~~~Hg-~P-~~r~Lq~ 193 (250)
..++..+++.++++.+.+.++||++-.||+..+++.+.+.|..... . .....+.....+ .+++. .+ ++.+|++
T Consensus 131 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G~~~~~-~--~~GHgiG~~~he~p~i~~~~~~~~~~~L~~ 207 (262)
T 1o0x_A 131 RGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGFNVIR-D--YVGHGVGRELHEDPQIPNYGTPGTGVVLRK 207 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHTTCEECC-S--SCEEECSSSSSEEEEECSCCCTTCSCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccC-C--cccCcccccccCCCccCCCCCCCCCCccCC
Confidence 4677788888999999999999999999999999999998864311 1 111222211111 12221 12 4678999
Q ss_pred CCEEEEEEeeEE
Q 025641 194 GDTINIDVTVYL 205 (250)
Q Consensus 194 GDiV~IDvg~~~ 205 (250)
|+++.|+.+.+.
T Consensus 208 Gmv~tiEPgi~~ 219 (262)
T 1o0x_A 208 GMTLAIEPMVSE 219 (262)
T ss_dssp TCEEEECCEEES
T ss_pred CCEEEECCEEEc
Confidence 999999998876
No 42
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=96.69 E-value=0.0096 Score=51.70 Aligned_cols=85 Identities=24% Similarity=0.266 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC--ccccC-CC-CCCcCCC
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHG-IP-DSRALED 193 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~--~~~Hg-~P-~~r~Lq~ 193 (250)
..+++.+++.++++.+.+.++||++-.||+..+++.+.+.|..... .+ ....+.....+ .+.+. .+ ++.+|++
T Consensus 120 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G~~~~~-~~--~GHgiG~~~he~p~i~~~~~~~~~~~l~~ 196 (263)
T 2gg2_A 120 MGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVR-EY--CGHGIGRGFHEEPQVLHYDSRETNVVLKP 196 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHTTCEECS-SC--CEEECSSSSSEEEEECSSCCTTCCCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEECC-Cc--ccccCCcceecCCcccCccCCCCCCCcCC
Confidence 4577788888999999999999999999999999999998864311 11 11222111111 12221 22 4678999
Q ss_pred CCEEEEEEeeEE
Q 025641 194 GDTINIDVTVYL 205 (250)
Q Consensus 194 GDiV~IDvg~~~ 205 (250)
|+++.|+.+.+.
T Consensus 197 Gmv~tiEPgi~~ 208 (263)
T 2gg2_A 197 GMTFTIEPMVNA 208 (263)
T ss_dssp TCEEEECCEEES
T ss_pred CCEEEEecEEEc
Confidence 999999998875
No 43
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=96.61 E-value=0.0095 Score=51.28 Aligned_cols=100 Identities=22% Similarity=0.242 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCc---cccCC-C-CCCcCC
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC---ICHGI-P-DSRALE 192 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~---~~Hg~-P-~~r~Lq 192 (250)
..+++.+++.++++.+.+.++||++-.||+..+++.+.+.|..... .+ ....+.....+. +++.. + ++.+|+
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~g~~~~~-~~--~GHgiG~~~he~p~~i~~~~~~~~~~~l~ 194 (252)
T 1qxy_A 118 MKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIK-NL--TGHGVGLSLHEAPAHVLNYFDPKDKTLLT 194 (252)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTCBTHHHHHHHHHHHHHTTCEECT-TC--CEEECSSSSSEEEEEECSSCCTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEecC-Cc--cccccCcccccCCccccCCCCCCCCCCcc
Confidence 4567788888999999999999999999999999999998864311 11 122222222211 12221 2 467899
Q ss_pred CCCEEEEEEeeEE------------------CCEEeceeeEEEcCC
Q 025641 193 DGDTINIDVTVYL------------------NGYHGDTSATFFCGD 220 (250)
Q Consensus 193 ~GDiV~IDvg~~~------------------~GY~aD~sRT~~VG~ 220 (250)
+|+++.|+.+.+. +++-.-+.-|++|.+
T Consensus 195 ~Gmv~tiEPgi~~g~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt~ 240 (252)
T 1qxy_A 195 EGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTK 240 (252)
T ss_dssp TTBEEEECCEEESSCSSCEECSSSSCEECTTCCCEEEEEEEEECCT
T ss_pred CCCEEEEecEEEcCCCceEecCCCceEEecCCCcEEEEEEEEEECC
Confidence 9999999998764 124445677888743
No 44
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=96.61 E-value=0.011 Score=51.27 Aligned_cols=85 Identities=16% Similarity=0.213 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCc--ccc-CCC-CCCcCCCC
Q 025641 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICH-GIP-DSRALEDG 194 (250)
Q Consensus 119 mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~--~~H-g~P-~~r~Lq~G 194 (250)
.|+..+++.++++.+.+.++||++-.||+..+++.+.+.|.... ..+ ++..+.....+. +.+ +.+ ++.+|++|
T Consensus 119 ~~~l~~~v~~a~~~~i~~~kpG~~~~di~~a~~~~~~~~g~~~~-~~~--~GHgiG~~~~e~p~i~~~~~~~~~~~L~~G 195 (264)
T 3tb5_A 119 IDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGYGVV-RDF--VGHGIGPTIHESPMIPHYGEAGKGLRLKEG 195 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEEC-CSC--CEEECSSSSSEEEEECSSCCTTCSCBCCTT
T ss_pred HHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHcCCcee-eec--eecCCCCCCccCCccCccccCCCCCCccCC
Confidence 45678888999999999999999999999999999999886321 111 122221111111 111 112 34689999
Q ss_pred CEEEEEEeeEEC
Q 025641 195 DTINIDVTVYLN 206 (250)
Q Consensus 195 DiV~IDvg~~~~ 206 (250)
+++.|+-+.++.
T Consensus 196 mv~tiEPgiy~~ 207 (264)
T 3tb5_A 196 MVITIEPMVNTG 207 (264)
T ss_dssp CEEEECCEEESS
T ss_pred cEEEEeeeEEcC
Confidence 999999988764
No 45
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=96.59 E-value=0.0096 Score=54.28 Aligned_cols=99 Identities=18% Similarity=0.157 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCC-CCCcCCCCCE
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDT 196 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P-~~r~Lq~GDi 196 (250)
..|++.+++.++++.+.+.++||++-.|++..+.+.+.+.|...... ++....+....++ .|...| ++.+|++|++
T Consensus 260 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~~~--h~~GHgiGl~~hE-~P~i~~~~~~~L~~Gmv 336 (377)
T 4fkc_A 260 EVKKVYEIVKEAQETAVQKVAEGIPAEVVDATARGIISKYGYGEYFI--HRTGHGLGIDVHE-EPYISPGNKKILKDGMV 336 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTCBHHHHHHHHHHHHHHTTCTTTCC--SCSEEECSSSSSE-EEEECSSCCCBCCTTCE
T ss_pred HHHHhhhhhHHHHHHHHHhhcCCcchhhhHHHHHHHHHHhcccccCC--CCCeEeCCCcccc-CCcccCCCCCEeCCCCE
Confidence 35677778888899999999999999999999999999988643211 1111222222222 122223 4678999999
Q ss_pred EEEEEeeEECCE-EeceeeEEEcC
Q 025641 197 INIDVTVYLNGY-HGDTSATFFCG 219 (250)
Q Consensus 197 V~IDvg~~~~GY-~aD~sRT~~VG 219 (250)
+.|+-|.+..|. -.-+.-|++|.
T Consensus 337 ~tiEPgiy~~g~~GvriEd~v~Vt 360 (377)
T 4fkc_A 337 FTIEPGIYLQGKFGVRIEDDVALV 360 (377)
T ss_dssp EEECCEEEETTTEEEECBEEEEEE
T ss_pred EEECCeeEECCccEEEEccEEEEE
Confidence 999999988764 34456677774
No 46
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=96.58 E-value=0.014 Score=54.40 Aligned_cols=101 Identities=12% Similarity=0.084 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCC-CCCCCCCCCCCCceeeecCCCccccCC-C-CCCcCCCC
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG-AYPSPLGYGGFPKSVCTSVNECICHGI-P-DSRALEDG 194 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~G-a~ps~l~y~gfp~~V~sg~N~~~~Hg~-P-~~r~Lq~G 194 (250)
..|++.+++.++++.+.+.++||++-.||+..+++.+.+.| .+...+. ++..+.|.....+. +..+ + ++++|++|
T Consensus 307 ~~~~~y~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~~~g~~~~~~-h~~GHgiGl~~he~-p~~~~~~~~~~l~~G 384 (444)
T 3cb6_A 307 EQQKNYSFLVALQKKLFEYCRDGAVIGDIYTKILGLIRAKRPDLEPNFV-RNLGAGIGIEFRES-SLLVNAKNPRVLQAG 384 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHHCGGGGGGBC-SCCEEECSSSSCBG-GGCCSTTCCCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhhhhhhHhhcc-cccccccCccccCC-ccccCCCCCcccCCC
Confidence 45777888889999999999999999999999999999985 2221000 11222232222222 2111 2 46899999
Q ss_pred CEEEEEEeeE-E----------CCEEeceeeEEEcCC
Q 025641 195 DTINIDVTVY-L----------NGYHGDTSATFFCGD 220 (250)
Q Consensus 195 DiV~IDvg~~-~----------~GY~aD~sRT~~VG~ 220 (250)
.++.|..|.+ . +++-.-+.-|++|.+
T Consensus 385 mv~tiEPgiy~~~~~~~~~~~~~~~gvriEd~v~vt~ 421 (444)
T 3cb6_A 385 MTLNLSIGFGNLINPHPKNSQSKEYALLLIDTIQITR 421 (444)
T ss_dssp CEEEEEEEEEEEECSSCCTTSCSEEEEEEEEEEECCS
T ss_pred CEEEEEeccccccCcccccccCCceEEEEEEEEEECC
Confidence 9999999987 2 346677888999853
No 47
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=96.55 E-value=0.025 Score=52.99 Aligned_cols=100 Identities=18% Similarity=0.229 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHH----CCCCC----------CCCCC--CCCCceeeecCCCccc
Q 025641 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIID----NGAYP----------SPLGY--GGFPKSVCTSVNECIC 182 (250)
Q Consensus 119 mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~----~Ga~p----------s~l~y--~gfp~~V~sg~N~~~~ 182 (250)
.|++-+++.++++.+.+.++||++-.||+..+.+.+.+ .|... ..-.| ++....+...+++ .+
T Consensus 286 ~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~GHgiGl~~he-~p 364 (440)
T 2v3z_A 286 QREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHD-VG 364 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCSSSSSC-CS
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCCCCcCCccccc-CC
Confidence 56778888899999999999999999999999888753 34210 00001 1222223222222 22
Q ss_pred cCCC-CCCcCCCCCEEEEEEeeEEC----------CEEeceeeEEEcC
Q 025641 183 HGIP-DSRALEDGDTINIDVTVYLN----------GYHGDTSATFFCG 219 (250)
Q Consensus 183 Hg~P-~~r~Lq~GDiV~IDvg~~~~----------GY~aD~sRT~~VG 219 (250)
+..+ ++++|++|.++.|.-|.+.. |+-.-+.-|++|.
T Consensus 365 ~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~~~~GvriEd~vlVt 412 (440)
T 2v3z_A 365 VYGQDRSRILEPGMVLTVAPGLYIAPDAEVPEQYRGIGIRIEDDIVIT 412 (440)
T ss_dssp CCCGGGCCCCCTTCEEEECCEEEECTTCSSCGGGTTEEEECBEEEEEE
T ss_pred CcCCCCCCccCCCCEEEECCEEEeCCccccccccceeEEEEeeEEEEC
Confidence 3222 46799999999999999987 5777788888884
No 48
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=96.53 E-value=0.0075 Score=53.33 Aligned_cols=99 Identities=13% Similarity=0.060 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHH----HHC--CCCCCCCCCCCCCceeeecCCCc--cccCC-C-CC
Q 025641 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMI----IDN--GAYPSPLGYGGFPKSVCTSVNEC--ICHGI-P-DS 188 (250)
Q Consensus 119 mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i----~~~--Ga~ps~l~y~gfp~~V~sg~N~~--~~Hg~-P-~~ 188 (250)
.+++.+++.++++.+.+.++||++-.||+..+.+.+ .+. |..+. ..+ +...|.....+. +.+.. + ++
T Consensus 150 ~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~~~~~~~g~~~~-~~~--~GHgiG~~~hE~P~i~~~~~~~~~ 226 (286)
T 3tav_A 150 DEALSEATRLSMEAGIAAMIPGNRLTDVSHAIELGTRAAEKQFDRAFGIV-DGY--GGHGIGRSMHLDPFLPNEGAPGKG 226 (286)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHHHHHHTCCCEEC-TTC--CEEECSSSSSEEEEECSSCCSSCS
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCccc-CCc--ccCcccccccCCccccCcCCCCCC
Confidence 567778888899999999999999999999999999 887 64321 111 122222212111 22211 2 46
Q ss_pred CcCCCCCEEEEEEeeEEC------------------CEEeceeeEEEcCC
Q 025641 189 RALEDGDTINIDVTVYLN------------------GYHGDTSATFFCGD 220 (250)
Q Consensus 189 r~Lq~GDiV~IDvg~~~~------------------GY~aD~sRT~~VG~ 220 (250)
.+|++|+++.|+.+.+.. +|-.-+.-|++|.+
T Consensus 227 ~~L~~GmV~tiEPgiy~~~~~~~~~~~~w~~~t~dg~~gvriEd~v~Vt~ 276 (286)
T 3tav_A 227 PLLAVGSVLAIEPMLTLGTTQTRVLADDWTVVTTDGSRAAHWEHTVAVTE 276 (286)
T ss_dssp SBCCTTBEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEECCT
T ss_pred CCcCCCCEEEEcCEEEcCCCceEecCCCceEEecCCCcEEEeeeEEEECC
Confidence 789999999999998753 34556677888843
No 49
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=96.43 E-value=0.0096 Score=54.61 Aligned_cols=98 Identities=14% Similarity=0.057 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCC------CCCCcC
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI------PDSRAL 191 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~------P~~r~L 191 (250)
..+++.+++.++++.+.+.++||++-.||+..+.+.+.+.|.... .. +++...+...+++ .+|++ .++.+|
T Consensus 272 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~G~~~~-~~-~~~GHgiG~~~He-~~~~~g~~~~~~~~~~l 348 (402)
T 1kp0_A 272 ASLZIWZKNTAVHRRGLZLIKPGARCKDIASELNBMYRZWDLLRY-RT-FGYGHSFGVLBHY-YGREAGVELREDIZTVL 348 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGG-BC-SCSCBBCEEEETT-EECCTTCBCCTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCee-cC-CCcccccCCcccc-CCcccCcccCCCCCCcc
Confidence 457778888899999999999999999999999999999986431 11 1223333222222 23321 246789
Q ss_pred CCCCEEEEEEeeEEC----CEE-eceeeEEEc
Q 025641 192 EDGDTINIDVTVYLN----GYH-GDTSATFFC 218 (250)
Q Consensus 192 q~GDiV~IDvg~~~~----GY~-aD~sRT~~V 218 (250)
++|+++.|+-+.+.. |.. .=+.-+++|
T Consensus 349 ~~Gmv~tiEPgiy~~~~~~~~~G~ried~v~V 380 (402)
T 1kp0_A 349 EPGMVVSMEPMVMBPEGEPGAGGYREHDILVI 380 (402)
T ss_dssp CTTCEEEECCEEEECTTSTTCEEEECBEEEEE
T ss_pred CCCcEEEECCceeecCccCCCCcEEEEEEEEE
Confidence 999999999999876 432 233455555
No 50
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=96.41 E-value=0.022 Score=53.37 Aligned_cols=100 Identities=17% Similarity=0.145 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHCC-CCCCCCCCCCCCceeeecCCCccccCC-C-C-CCcCC
Q 025641 118 CMRVSGRLAAQVLEYAGTL-VKPGITTDEIDKAVHQMIIDNG-AYPSPLGYGGFPKSVCTSVNECICHGI-P-D-SRALE 192 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~-I~pGvTe~EI~~~v~~~i~~~G-a~ps~l~y~gfp~~V~sg~N~~~~Hg~-P-~-~r~Lq 192 (250)
.++++.+++.++++.+.+. ++||++-.||+..+.+.+.+.| .+...+. ++....|....++. |..+ + + +.+|+
T Consensus 314 ~~~~~~~~v~~a~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~g~~~~~~-h~~GHgiGl~~hE~-p~~~~~~~~~~~l~ 391 (467)
T 3biq_A 314 EMANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVPNFT-KNIGSLIGLEFRDS-NFILNVKNDYRKIQ 391 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGGGGBC-SCCEEECSSSSCCG-GGBSSTTCCSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCcCCCcHHHHHHHHHHHHHHhCcchhhcCC-CCcccccccccccC-CccCCCCCCCCccC
Confidence 4577888888999999999 9999999999999999999987 2221000 11222222222222 2111 2 3 67999
Q ss_pred CCCEEEEEEeeE-E-----C-CEEeceeeEEEcC
Q 025641 193 DGDTINIDVTVY-L-----N-GYHGDTSATFFCG 219 (250)
Q Consensus 193 ~GDiV~IDvg~~-~-----~-GY~aD~sRT~~VG 219 (250)
+|.++.+.-|.+ . . .|-.-+.-|++|.
T Consensus 392 ~Gmv~tiEPgiy~~~~~~~~g~~gvriEd~v~Vt 425 (467)
T 3biq_A 392 RGDCFNISFGFNNLKDSQSANNYALQLADTVQIP 425 (467)
T ss_dssp TTCEEEEEEEEEEECCSSCSSCEEEEEEEEEECC
T ss_pred CCCEEEEeCeEEeeecCCCCCccEEEEEEEEEEe
Confidence 999999999998 4 4 5667788899986
No 51
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=96.37 E-value=0.019 Score=53.88 Aligned_cols=100 Identities=14% Similarity=0.254 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHC----CCCCCCCCC-CCCCceeeecCCCccccCCC--CCCcC
Q 025641 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN----GAYPSPLGY-GGFPKSVCTSVNECICHGIP--DSRAL 191 (250)
Q Consensus 119 mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~----Ga~ps~l~y-~gfp~~V~sg~N~~~~Hg~P--~~r~L 191 (250)
.|++.+++.++++.+.+.++||++-.||+..+.+.+.+. |......+| ..|++.+.-|.. ...|-.| .+++|
T Consensus 282 ~~~~y~~vl~a~~~~i~~~kpG~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~iG-l~vhe~~~~~~~~L 360 (427)
T 3ig4_A 282 QKQIYNIVLNALKETTEIIKPGLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLG-LDTHDVGTYKDRVL 360 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCS-SSSSCCCCCTTCBC
T ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcCC-cCCCcCCCCCCCEe
Confidence 467788888999999999999999999999999888765 432100001 013332221111 1235444 57899
Q ss_pred CCCCEEEEEEeeEEC--CEEeceeeEEEcC
Q 025641 192 EDGDTINIDVTVYLN--GYHGDTSATFFCG 219 (250)
Q Consensus 192 q~GDiV~IDvg~~~~--GY~aD~sRT~~VG 219 (250)
++|.++.|+-|.+.. |+-.-+.-|++|.
T Consensus 361 ~~GMV~tiEPgiy~~~~g~GvriEd~vlVt 390 (427)
T 3ig4_A 361 EEGMVITIEPGLYIEEESIGIRIEDDILVT 390 (427)
T ss_dssp CTTCEEEECCEEEEGGGTEEEECBEEEEEC
T ss_pred CCCCEEEECCEEEECCCceEEEEeeEEEEe
Confidence 999999999999874 5666778899984
No 52
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=96.24 E-value=0.011 Score=53.61 Aligned_cols=99 Identities=16% Similarity=0.190 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC--ccccCCCC--CCcCCC
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGIPD--SRALED 193 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~--~~~Hg~P~--~r~Lq~ 193 (250)
..|+..+++.++++.+.+.++||++-.||+..+++.+.+.|.... ..+ +...|.....+ .++|+..+ +.+|++
T Consensus 189 ~~~~l~~~v~~a~~~ai~~~kPG~~~~dI~~~~~~~~~~~G~~~~-~~~--~GHGIG~~~HE~P~i~~~~~~~~~~~L~~ 265 (329)
T 2b3h_A 189 GARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGFSVV-RSY--CGHGIHKLFHTAPNVPHYAKNKAVGVMKS 265 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBTTHHHHHHHHHHHHTTCEEC-CSC--CEEECSSSSSEEEEECCSSSCCCCCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCcc-CCc--ccCCcCcccccCCcccccccCCCCCEECC
Confidence 356778888899999999999999999999999999999986421 111 12222211111 12332211 478999
Q ss_pred CCEEEEEEeeEEC-----------------C-EEeceeeEEEcC
Q 025641 194 GDTINIDVTVYLN-----------------G-YHGDTSATFFCG 219 (250)
Q Consensus 194 GDiV~IDvg~~~~-----------------G-Y~aD~sRT~~VG 219 (250)
|.++.|+-+.+.. | +-.-+.-|++|.
T Consensus 266 GMVftIEPgiy~~~~~~~~~~d~w~~~~~~G~~g~riEdtvlVT 309 (329)
T 2b3h_A 266 GHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVT 309 (329)
T ss_dssp TCEEEECCEEESSCCCEEECTTSCCEEETTCCCEEECBEEEEEC
T ss_pred CCEEEEeCCcCcCcccccccCCCceeEeeCCeEEEEEeeEEEEc
Confidence 9999999888742 2 334567788874
No 53
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=96.20 E-value=0.012 Score=54.39 Aligned_cols=84 Identities=13% Similarity=0.058 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC--ccccCC-C-CCCcCCCC
Q 025641 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGI-P-DSRALEDG 194 (250)
Q Consensus 119 mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~--~~~Hg~-P-~~r~Lq~G 194 (250)
.|+..+++.++++.+.+.++||++-.||++.+++.+.+.|.... ..+ ....|.....+ .+.|+. + ++.+|++|
T Consensus 221 ~~~ly~~v~ea~~aai~~ikPG~~~~dI~~aa~~~i~~~G~~~~-~~~--~GHGIG~~vHE~P~i~~~~~~~~~~~L~~G 297 (368)
T 3s6b_A 221 GKELVETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVSKKNFSVV-RSY--SGHGVGKLFHSNPTVPHFKKNKAVGIMKPG 297 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCBTHHHHHHHHHHHHTTTCEEC-CSC--CEEECSSSSSEEEEECSSSSCCCCCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCcc-cce--eeCCCCccccCCCccccccCCCCCCEECCC
Confidence 56777888899999999999999999999999999999886421 111 11222221221 233332 1 35689999
Q ss_pred CEEEEEEeeEE
Q 025641 195 DTINIDVTVYL 205 (250)
Q Consensus 195 DiV~IDvg~~~ 205 (250)
+++.|+-+.+.
T Consensus 298 MVfTIEPgiy~ 308 (368)
T 3s6b_A 298 HVFTIEPMINQ 308 (368)
T ss_dssp CEEEECCEEES
T ss_pred CEEEEcCeEEc
Confidence 99999998875
No 54
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=95.99 E-value=0.017 Score=51.53 Aligned_cols=84 Identities=19% Similarity=0.225 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceee-ecCCC--ccccCC-CC-CCcCC
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC-TSVNE--CICHGI-PD-SRALE 192 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~-sg~N~--~~~Hg~-P~-~r~Lq 192 (250)
..++..+++.++++.+.+.++||++-.||+..+++.+.+.|.... .++ ....+. ....+ .++|.. ++ +.+|+
T Consensus 103 ~~~~l~~~~~~a~~~~i~~~kpG~~~~dI~~a~~~~~~~~G~~~~-~~~--~GHgIG~l~~He~p~ip~~~~~~~~~~L~ 179 (295)
T 1xgs_A 103 EEDELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRGFKPI-VNL--SGHKIERYKLHAGISIPNIYRPHDNYVLK 179 (295)
T ss_dssp CCCHHHHHHHHHHHHHHHHCSTTCBTHHHHHHHHHHHHTTTCEEC-TTC--CEEECBTTBSSCSCEECSSCCTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHCCCeEE-CCC--cCCCCCCcccCCCCcCCccCCCCCCCEeC
Confidence 345778888999999999999999999999999999999886421 111 112221 01111 133432 33 67999
Q ss_pred CCCEEEEEEeeE
Q 025641 193 DGDTINIDVTVY 204 (250)
Q Consensus 193 ~GDiV~IDvg~~ 204 (250)
+|+++.|+-+.+
T Consensus 180 ~GmV~tIEP~i~ 191 (295)
T 1xgs_A 180 EGDVFAIEPFAT 191 (295)
T ss_dssp TTCEEEECCEEE
T ss_pred CCCEEEEcceeE
Confidence 999999999887
No 55
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=95.93 E-value=0.026 Score=51.94 Aligned_cols=98 Identities=15% Similarity=0.168 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCC------CCCCcC
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI------PDSRAL 191 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~------P~~r~L 191 (250)
..|++.+++.++++.+.+.++||++-.||++.+.+.+.+.|.... .. +++...+..-.++ .+|+. .++.+|
T Consensus 272 ~~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~~~G~~~~-~~-~~~GHgiG~~~h~-~~~~~g~~~~~~~~~~L 348 (401)
T 1chm_A 272 DHLRLWQVNVEVHEAGLKLIKPGARCSDIARELNEIFLKHDVLQY-RT-FGYGHSFGTLSHY-YGREAGLELREDIDTVL 348 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTCGGG-BC-SCSCBBCSBEETT-EECCTTSBCCTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcc-cC-CCCCcccCccCCc-cccccCccccCCCCCcc
Confidence 357788888899999999999999999999999999999886321 00 1222222211111 12221 246789
Q ss_pred CCCCEEEEEEeeEEC----CE-EeceeeEEEc
Q 025641 192 EDGDTINIDVTVYLN----GY-HGDTSATFFC 218 (250)
Q Consensus 192 q~GDiV~IDvg~~~~----GY-~aD~sRT~~V 218 (250)
++|.++.+.-|.+.. |. -.=+.-+++|
T Consensus 349 ~~Gmv~tiEPgiy~~~~~~g~~GvriEd~vlV 380 (401)
T 1chm_A 349 EPGMVVSMEPMIMLPEGLPGAGGYREHDILIV 380 (401)
T ss_dssp CTTCEEEECCEEEECTTSTTCEEEECBEEEEE
T ss_pred CCCCEEEEcCeeeeccccCCCCeEEEeeeEEE
Confidence 999999999999875 43 2234455555
No 56
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=95.31 E-value=0.15 Score=48.14 Aligned_cols=86 Identities=17% Similarity=0.218 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH-----------------HCCCCCCCCCCCCCCceeeecCCCc-
Q 025641 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII-----------------DNGAYPSPLGYGGFPKSVCTSVNEC- 180 (250)
Q Consensus 119 mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~-----------------~~Ga~ps~l~y~gfp~~V~sg~N~~- 180 (250)
.++..+++.++.+++.+.++||++-.||+..+++.+. +.|.+...+. ++....+...+.+.
T Consensus 271 ~~~ly~~vl~aq~aai~~ikPG~~~~di~~aa~~~i~~~l~~~G~~~~~~~~~~~~g~~~~~f~-H~~GHgiGldvHe~p 349 (451)
T 3rva_A 271 FRDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFP-HGIGHFLGLQVHDVG 349 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCC-SCSCCBCSSSSSCTT
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCC-CCCcccccCCcccCc
Confidence 4567888999999999999999999999999887664 3332110000 11222232222222
Q ss_pred -cccC-----------C---CCCCcCCCCCEEEEEEeeEE
Q 025641 181 -ICHG-----------I---PDSRALEDGDTINIDVTVYL 205 (250)
Q Consensus 181 -~~Hg-----------~---P~~r~Lq~GDiV~IDvg~~~ 205 (250)
+.++ . .++++|++|+++.|.-|.++
T Consensus 350 ~~~~~~~g~~~~~~~~~~~l~~~~~L~~GMV~TIEPGiY~ 389 (451)
T 3rva_A 350 GLVNDDRGTPKPAPDDHPFLRCTRMVEARQVFTIEPGLYF 389 (451)
T ss_dssp TTBSSTTCCBCCCCTTCTTCCCCCBCCTTCEEEECCEEEC
T ss_pred cccccccccccccccccccCCCCCCcCCCCEEEECCEEeE
Confidence 1110 1 13578999999999999987
No 57
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=95.20 E-value=0.03 Score=51.50 Aligned_cols=93 Identities=11% Similarity=0.027 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCC------C--CCCCCCCCCceeeecCCC-----ccccC
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAY------P--SPLGYGGFPKSVCTSVNE-----CICHG 184 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~------p--s~l~y~gfp~~V~sg~N~-----~~~Hg 184 (250)
..++..+++.++++.+.+.++||++-.||++.+++.+.+.|.. + ...++ ... .+|.+. .++|.
T Consensus 153 ~~~~l~~av~eA~~aai~~~kPGv~~~dI~~ai~~vi~~~G~~~~g~~~~~~~v~~~--~GH--gIG~y~iHe~P~I~~~ 228 (360)
T 2nw5_A 153 NLEPLLVAAREGTETGIKSLGVDVRVCDIGRDINEVISSYEVEIGGRMWPIRPISDL--HGH--SISQFRIHGGISIPAV 228 (360)
T ss_dssp GGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHTTCEEECSSSEEECEECTTC--CEE--EEBTTBSCCSCEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccccccccccccCCe--eEe--eecCceeccCCEeccc
Confidence 3566677888999999999999999999999999999888742 1 00111 111 233311 12222
Q ss_pred CC-CCCcCCCCCEEEEEEeeEE-CCEEeceee
Q 025641 185 IP-DSRALEDGDTINIDVTVYL-NGYHGDTSA 214 (250)
Q Consensus 185 ~P-~~r~Lq~GDiV~IDvg~~~-~GY~aD~sR 214 (250)
.+ ++.+|++|+++.|+.+++. .|+.-|-.+
T Consensus 229 ~~~~~~~Le~GmV~aIEP~i~~G~G~Vr~~~~ 260 (360)
T 2nw5_A 229 NNRDTTRIKGDSFYAVETFATTGKGSIDDRPP 260 (360)
T ss_dssp CCCCCCBCCSSEEEEEEEEEESSCSCCEECSC
T ss_pred cCCCCcEEeCCcEEEEeceEECCcceEEeCCc
Confidence 22 4578999999999998873 344434333
No 58
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=94.89 E-value=0.15 Score=47.43 Aligned_cols=83 Identities=19% Similarity=0.121 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCC--Cc----cccCC------
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN--EC----ICHGI------ 185 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N--~~----~~Hg~------ 185 (250)
..++..+++.++++.+++.++||++-.||...+++.+.+.|..+. .+|.| . .+|.. +. .++..
T Consensus 145 ~~~~l~~~~~~a~~~~i~~~kPG~~~~dI~~ai~~~~~~~G~~~v-~~~~G--H--GIG~~~HE~P~~i~~~~~~~~~~~ 219 (401)
T 2q8k_A 145 RKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPI-EGMLS--H--QLKQHVIDGEKTIIQNPTDQQKKD 219 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHTTTCEEC-TTCEE--E--EEBTTBSSCSCEEESSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCeec-CCccc--c--cCCCccccCCcccccCCCcccccC
Confidence 356677888899999999999999999999999999999886432 12211 1 22322 11 11110
Q ss_pred CCCCcCCCCCEEEEEEeeEE
Q 025641 186 PDSRALEDGDTINIDVTVYL 205 (250)
Q Consensus 186 P~~r~Lq~GDiV~IDvg~~~ 205 (250)
.++.+|++|+++.|+.+++.
T Consensus 220 ~~~~~L~~GmV~tIEP~i~~ 239 (401)
T 2q8k_A 220 HEKAEFEVHEVYAVDVLVSS 239 (401)
T ss_dssp SCCCBCCTTCEEEEEEEEES
T ss_pred CCCCEeCCCCEEEEeCceEe
Confidence 13568999999999999874
No 59
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=94.72 E-value=0.037 Score=52.62 Aligned_cols=98 Identities=14% Similarity=0.162 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC--ccccC-----CCCCCc
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHG-----IPDSRA 190 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~--~~~Hg-----~P~~r~ 190 (250)
.+|+..+++.++++.+.+.++||++-.||+..+++.+.+.|... |++....|.. +.+ .+.|. ..++.+
T Consensus 345 ~~~~~y~~v~~a~~a~i~~ikpG~~~~di~~~ar~~i~~~~~~~----~~~~GHGIGl-~HE~P~i~~~~~~~~~~~~~~ 419 (470)
T 4b28_A 345 DMIYAMQHGVEHIRTNMEMLKPGVMIPELSANTHVLDAKFQKQK----YGCLMHGVGL-CDEWPLVAYPDHAVAGAYDYP 419 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHTCCCCCHHHHTTC----CSCSEEEESS-SEEEEEECCTTTCCTTSSCCB
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhhhcC----CCCccCCCCc-CCCCCcccCccccccCCCCCE
Confidence 45777888899999999999999999999999887766544321 1112222221 111 11111 124678
Q ss_pred CCCCCEEEEEEeeEE-C-CEEeceeeEEEcCC
Q 025641 191 LEDGDTINIDVTVYL-N-GYHGDTSATFFCGD 220 (250)
Q Consensus 191 Lq~GDiV~IDvg~~~-~-GY~aD~sRT~~VG~ 220 (250)
|++|.++.|+-+.+. . .+-.-+.-|++|.+
T Consensus 420 L~~GMV~tiEPgiy~~~g~~GvriEd~vlVte 451 (470)
T 4b28_A 420 LEPGMTLCVEALISEEGGDFSIKLEDQVLITE 451 (470)
T ss_dssp CCTTCEEEEEEEEECTTCSCEEEEEEEEEECS
T ss_pred ECCCCEEEEcCeeecCCCcEEEEEeeEEEEeC
Confidence 999999999998876 4 45667888998853
No 60
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=94.69 E-value=0.18 Score=48.63 Aligned_cols=86 Identities=15% Similarity=0.147 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH----HCC-------------CCCCCCCCCCCCceeeecCCCc-
Q 025641 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNG-------------AYPSPLGYGGFPKSVCTSVNEC- 180 (250)
Q Consensus 119 mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~----~~G-------------a~ps~l~y~gfp~~V~sg~N~~- 180 (250)
.++..+++.++.+++.+.++||++-.||+..+++.+. +.| .+...+. ++....+...+++.
T Consensus 268 ~~~ly~~vl~Aq~aai~~ikPGv~~~dI~~aa~~~i~~~L~~~G~~~~~~~~~~~~g~~~~~f~-HglGHgiGLdvHE~p 346 (517)
T 3l24_A 268 FAELVATMKQHQIALMNQLAPGKLYGELHLDCHQRVAQTLSDFNIVDLSADEIVAKGITSTFFP-HGLGHHIGLQVHDVG 346 (517)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHHHHHHHHTTSBSSCHHHHHHTTCGGGTCC-SCSCCBCSSSSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCC-CCCCCCCCcccccCc
Confidence 5677889999999999999999999999998887653 333 2111000 11222232223322
Q ss_pred -cccC-----------C---CCCCcCCCCCEEEEEEeeEE
Q 025641 181 -ICHG-----------I---PDSRALEDGDTINIDVTVYL 205 (250)
Q Consensus 181 -~~Hg-----------~---P~~r~Lq~GDiV~IDvg~~~ 205 (250)
+.++ . -++++|++|.++.|.-|.++
T Consensus 347 ~~~~~~~g~~~~~~~~~p~l~~~~~Le~GMV~TIEPGiY~ 386 (517)
T 3l24_A 347 GFMADEQGAHQEPPEGHPFLRCTRKIEANQVFTIEPGLYF 386 (517)
T ss_dssp CTTC---------------CCTTCBCCTTEEEEECCEEEC
T ss_pred cccccccccccccccccccCCCCccccCCcEEEECCEEee
Confidence 1110 1 13578999999999999987
No 61
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=94.60 E-value=0.056 Score=48.89 Aligned_cols=85 Identities=15% Similarity=0.128 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC--ccccCC-C-CCCcCCCC
Q 025641 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGI-P-DSRALEDG 194 (250)
Q Consensus 119 mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~--~~~Hg~-P-~~r~Lq~G 194 (250)
.++..+++.++++.+.+.++||++-.||...+++.+.+.|.... ..+ ++..+.....+ .++|+. + ++.+|++|
T Consensus 178 ~~~l~~~v~ea~~~ai~~~kpG~~~~di~~~~~~~~~~~g~~~~-~~~--~GHGIG~~~he~p~~~~~~~~~~~~~L~~G 254 (337)
T 4fuk_A 178 SVRLVHAAYECLCAGIGVVKPEALYKQVGDAIEACASQYQCSVV-RTY--TGHGVGHLFHTSPTVCHYANNKSLGMMRPG 254 (337)
T ss_dssp HHHHHHHHHHHHHHHHTTCSTTCBTTHHHHHHHHHHHTTTCEEC-SSE--EEEECSSSSSEEEEECCSCC---CCBCCTT
T ss_pred HHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhcCCcc-cCc--ccCCCCCccccCCcccccccCCCCCEeCCC
Confidence 45567888899999999999999999999999998888765321 111 11222111111 122222 1 24689999
Q ss_pred CEEEEEEeeEEC
Q 025641 195 DTINIDVTVYLN 206 (250)
Q Consensus 195 DiV~IDvg~~~~ 206 (250)
+++.|.-+.+..
T Consensus 255 MV~TIEPgiy~~ 266 (337)
T 4fuk_A 255 HVFTIEPMINLG 266 (337)
T ss_dssp CEEEECCEEESS
T ss_pred CEEEECCeeEcC
Confidence 999999888764
No 62
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=94.21 E-value=0.1 Score=51.10 Aligned_cols=95 Identities=18% Similarity=0.143 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcC-CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceee--ecCCCccccCC----CCCCcC
Q 025641 119 MRVSGRLAAQVLEYAGTLVKP-GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGI----PDSRAL 191 (250)
Q Consensus 119 mR~A~~ia~~~l~~a~~~I~p-GvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~--sg~N~~~~Hg~----P~~r~L 191 (250)
+|++..++.+++..+.+.++| |++-.+|+..+.+.+.+.|.+.. ++..+.|. ..+++. |+++ .++.+|
T Consensus 440 ~~~~y~~vl~a~~~~~~~~~p~G~~~~~id~~ar~~l~~~G~~~~----h~~GHgvG~~l~vHE~-P~~i~~~~~~~~~L 514 (623)
T 3ctz_A 440 EKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYL----HGTGHGVGSFLNVHEG-PCGISYKTFSDEPL 514 (623)
T ss_dssp HHHHHHHHHHHHHHHHTCCEETTCBGGGGGGGGTHHHHHTTCCCS----SCSEEBCCSSSCSSCC-SCEECTTCSCSCBC
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHhCCCCC----CCccccCCCCCCCCCC-CccCCCCCCCCCcc
Confidence 567788888899999999999 99999999999999999986311 22223332 223331 2211 145789
Q ss_pred CCCCEEEEEEeeEECC-EEeceeeEEEc
Q 025641 192 EDGDTINIDVTVYLNG-YHGDTSATFFC 218 (250)
Q Consensus 192 q~GDiV~IDvg~~~~G-Y~aD~sRT~~V 218 (250)
++|+++.+.-|.+..| |-.-+.-|++|
T Consensus 515 ~~GMv~tiEPGiy~~g~~GiRiEd~vlV 542 (623)
T 3ctz_A 515 EAGMIVTDEPGYYEDGAFGIRIENVVLV 542 (623)
T ss_dssp CTTCEEEECCEEEETTTEEEECBEEEEE
T ss_pred CCCeEEEEeCcEEECCceEEEEeeEEEE
Confidence 9999999999999876 44455556665
No 63
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=93.73 E-value=0.32 Score=46.20 Aligned_cols=88 Identities=14% Similarity=0.232 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH----HCCCCCCC--------CC--C--CCCCceeeecCCCc-
Q 025641 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNGAYPSP--------LG--Y--GGFPKSVCTSVNEC- 180 (250)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~----~~Ga~ps~--------l~--y--~gfp~~V~sg~N~~- 180 (250)
..|+.-+++.++++++.+.++||++-.||...+++.+. +.|..... +. | ++....+...+.+.
T Consensus 302 ~q~~~y~~v~~a~~~~i~~~kpG~~~~di~~~a~~~i~~~l~~~G~~~g~~~~~~~~g~~~~~~~H~~GHgiGl~vHd~~ 381 (494)
T 2iw2_A 302 DQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVG 381 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCSSSSSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHcCCccccHHHHHhcccccccCCCCCcCCCCcccccCC
Confidence 45777888889999999999999999999999987764 44531100 00 0 11222222222221
Q ss_pred -c---------ccC-C-CCCCcCCCCCEEEEEEeeEE
Q 025641 181 -I---------CHG-I-PDSRALEDGDTINIDVTVYL 205 (250)
Q Consensus 181 -~---------~Hg-~-P~~r~Lq~GDiV~IDvg~~~ 205 (250)
. ++. . -++++|++|.++.|+-|.+.
T Consensus 382 ~~~~~~~~~~~p~~~~~~~~~~L~~GMV~tiEPGiy~ 418 (494)
T 2iw2_A 382 GYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYF 418 (494)
T ss_dssp SSCTTCCCCCSTTGGGCSCCCBCCTTCEEEECCEEEC
T ss_pred CcccccccccccccccCCCCCEeCCCCEEEECCcccc
Confidence 1 111 0 14679999999999998875
No 64
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=93.61 E-value=0.15 Score=48.63 Aligned_cols=91 Identities=7% Similarity=-0.004 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCC--C------CCCCCCCCCcee-eecCCCc--cccCC
Q 025641 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAY--P------SPLGYGGFPKSV-CTSVNEC--ICHGI 185 (250)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~--p------s~l~y~gfp~~V-~sg~N~~--~~Hg~ 185 (250)
+..++..+++.++++.+++.++||++-.||...+++.+.++|.. + ...++ ....| .....+. ++|..
T Consensus 271 ~e~~~L~eav~eA~~aaI~~~kPG~~~~dI~~ai~~~i~~~G~~l~g~~~~~~~v~h~--~GHGIGGl~iHE~P~vP~~~ 348 (478)
T 1b6a_A 271 PKYDTLLKAVKDATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNL--NGHSIGQYRIHAGKTVPIVK 348 (478)
T ss_dssp GGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHTCEEEETTEEEECEECTTC--EEEEEBTTBSCCSCEEESSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCcccccccceeecCc--ceeCCCCccccCCCccceec
Confidence 35778888899999999999999999999999999999998742 0 00011 11222 1112221 45544
Q ss_pred C-CCCcCCCCCEEEEEEeeEEC-CEE
Q 025641 186 P-DSRALEDGDTINIDVTVYLN-GYH 209 (250)
Q Consensus 186 P-~~r~Lq~GDiV~IDvg~~~~-GY~ 209 (250)
+ ++.+|++|+++.|+.+++.. |+.
T Consensus 349 ~~~~~~Le~GMVftIEP~i~~G~G~~ 374 (478)
T 1b6a_A 349 GGEATRMEEGEVYAIETFGSTGKGVV 374 (478)
T ss_dssp SCCCCBCCTTCEEEEEEEEESSCSCC
T ss_pred CCCCCEeCCCCEEEEeCeeECCCCEE
Confidence 4 36789999999999987743 443
No 65
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=83.16 E-value=2.1 Score=38.92 Aligned_cols=79 Identities=9% Similarity=-0.050 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHCCCCCC--------CCCCCCCCceeeecCC-----CccccCCC-CC
Q 025641 123 GRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPS--------PLGYGGFPKSVCTSVN-----ECICHGIP-DS 188 (250)
Q Consensus 123 ~~ia~~~l~~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps--------~l~y~gfp~~V~sg~N-----~~~~Hg~P-~~ 188 (250)
.+.+..+++++.+.++||++..+|...+++.+.+.|..-. .-+| +.. .+|.+ ..++|..+ ++
T Consensus 156 ~~~~~~al~aai~~~~pG~~~~dig~ai~~v~~~~~~~v~~~~~~~~~v~~~--~GH--giG~~~~he~~~ip~~~~~~~ 231 (358)
T 3fm3_A 156 LVAAREGTETGIKSLGVDVRVCDIGRDINEVISSYEVEIGGRMWPIRPISDL--HGH--SISQFRIHGGISIPAVNNRDT 231 (358)
T ss_dssp HHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHTTCEEECSSSEEECEECTTC--CEE--EEBTTBSCCSCEECSSCCCCC
T ss_pred HHHHHHHHHHHHHhhhcCCccccccHHHHHHHhhccceeccccccccccccc--ccc--ccCCccccCCCccCccCCCCC
Confidence 3566778889999999999999999999999888763210 0111 112 22321 12344332 35
Q ss_pred CcCCCCCEEEEEEeeEE
Q 025641 189 RALEDGDTINIDVTVYL 205 (250)
Q Consensus 189 r~Lq~GDiV~IDvg~~~ 205 (250)
..|++|+++.|+.-+..
T Consensus 232 ~~le~GmV~tIEP~is~ 248 (358)
T 3fm3_A 232 TRIKGDSFYAVETFATT 248 (358)
T ss_dssp CBCCSSEEEEEEEEEES
T ss_pred cEEeeeeeEEeeeeeec
Confidence 68999999999998774
No 66
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=56.15 E-value=55 Score=32.03 Aligned_cols=31 Identities=16% Similarity=-0.009 Sum_probs=22.5
Q ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHCCCCCC
Q 025641 132 YAGTLVKPGITTDEIDKAVHQMIIDNGAYPS 162 (250)
Q Consensus 132 ~a~~~I~pGvTe~EI~~~v~~~i~~~Ga~ps 162 (250)
.....++||+|..+|...++..+...++.+.
T Consensus 230 a~l~~~~~gvt~~~It~~IekvaksY~ck~V 260 (614)
T 4b6a_t 230 ASLGGTSSGITGQLIRTIVDTIARSYNCGVV 260 (614)
T ss_dssp ------STTCBHHHHHHHHHHHHHTTTCEEC
T ss_pred hhhhccCCCcchHHHHHHHHHHHhcCCcEEe
Confidence 3445569999999999999999999887653
No 67
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=47.38 E-value=8.1 Score=22.94 Aligned_cols=24 Identities=17% Similarity=0.213 Sum_probs=18.9
Q ss_pred eeeEEEcCCCCHHHHHHHHHHHHH
Q 025641 212 TSATFFCGDVDDEARNLVKVVCWN 235 (250)
Q Consensus 212 ~sRT~~VG~~~~e~~~l~~~~~eA 235 (250)
.-||+.||-.++|.+++-+-+.+|
T Consensus 4 qvrtiwvggtpeelkklkeeakka 27 (36)
T 2ki0_A 4 QVRTIWVGGTPEELKKLKEEAKKA 27 (36)
T ss_dssp SCCCCCBCCCHHHHHHHHHHHHHH
T ss_pred eeEEEEecCCHHHHHHHHHHHHhc
Confidence 358999998888998888766654
No 68
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=33.98 E-value=33 Score=31.77 Aligned_cols=45 Identities=13% Similarity=0.323 Sum_probs=33.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCCCCCcCCCCCEEEEEEeeEECCEE
Q 025641 141 ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYH 209 (250)
Q Consensus 141 vTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P~~r~Lq~GDiV~IDvg~~~~GY~ 209 (250)
+|+.+|+..+.....+++-. + +-+++.+.||.|.||+.+..+|-.
T Consensus 129 Vtde~Vd~~l~~l~~~~a~~------------~------------~ve~~a~~gD~V~id~~~~~dG~~ 173 (433)
T 3gty_X 129 VLEKYVERRIEDLRESHALL------------E------------PKEGPAEAGDLVRVNMEVYNEEGK 173 (433)
T ss_dssp HHHHHHHHHHHHHHHHTCCE------------E------------ECCSCCCTTSEEEEEEEEECTTSC
T ss_pred CCHHHHHHHHHHHHHhcCee------------e------------ccccccCCCCEEEEEEEEEECCEE
Confidence 47889999988777765521 1 224678999999999998877743
No 69
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=30.05 E-value=63 Score=29.80 Aligned_cols=57 Identities=18% Similarity=0.269 Sum_probs=38.8
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCCCCCcCCCCCEEEEEEeeEECCEEece----ee
Q 025641 139 PGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDT----SA 214 (250)
Q Consensus 139 pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~----sR 214 (250)
.-+|+.+|+..+.....+++-. + +.++.++.||.|.+|+.+..+|=.-|. ..
T Consensus 130 ~eVtde~Vd~~l~~l~~~~a~~------------~------------~~~~~~~~gD~V~i~y~g~~dG~~fd~~~~~~~ 185 (432)
T 1w26_A 130 VEVTDADVDGMLDTLRKQQATW------------K------------EKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDF 185 (432)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEE------------C------------CCSSCCCTTCEEEECEEEESSSCBCSSCCCSSE
T ss_pred CCcCHHHHHHHHHHHHHhCCee------------e------------ecCCCCCCCCEEEEEEEEeeCCeEccCCCccce
Confidence 4589999999998777765421 1 224667899999999988766643332 34
Q ss_pred EEEcC
Q 025641 215 TFFCG 219 (250)
Q Consensus 215 T~~VG 219 (250)
+|.+|
T Consensus 186 ~~~lG 190 (432)
T 1w26_A 186 VLAMG 190 (432)
T ss_dssp EEETT
T ss_pred EEEeC
Confidence 66666
No 70
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=28.97 E-value=54 Score=24.35 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=24.7
Q ss_pred CCcCCCCCEEEEEEeeEECCEEecee----eEEEcC
Q 025641 188 SRALEDGDTINIDVTVYLNGYHGDTS----ATFFCG 219 (250)
Q Consensus 188 ~r~Lq~GDiV~IDvg~~~~GY~aD~s----RT~~VG 219 (250)
++.+++||.|.+|+.+..+|---|.+ .+|.+|
T Consensus 27 ~~~~~~gD~V~v~Y~g~~dG~~fdss~~~p~~f~lG 62 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIVDNKKLASASAQNYELTIG 62 (113)
T ss_dssp --CCCSSEEEEEEEEEEETTEECSTTCCSEEEEEET
T ss_pred CCCCCCCCEEEEEEEEEECCEEcccCCccCEEEEEC
Confidence 57899999999999998888776765 467766
No 71
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=27.01 E-value=74 Score=22.52 Aligned_cols=33 Identities=27% Similarity=0.326 Sum_probs=24.4
Q ss_pred CCcCCCCCEEEEEEeeEE-CCEEecee------eEEEcCC
Q 025641 188 SRALEDGDTINIDVTVYL-NGYHGDTS------ATFFCGD 220 (250)
Q Consensus 188 ~r~Lq~GDiV~IDvg~~~-~GY~aD~s------RT~~VG~ 220 (250)
++.+++||.|.+++..+. +|-.-|.+ .+|.+|.
T Consensus 3 g~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~ 42 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGT 42 (102)
T ss_dssp CCCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTS
T ss_pred CCcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCC
Confidence 456789999999999886 77655544 4677753
No 72
>2m0n_A Putative uncharacterized protein; tuberculosis, structural genomics, seattle structural genomi for infectious disease, ssgcid; NMR {Mycobacterium abscessus}
Probab=24.95 E-value=73 Score=24.30 Aligned_cols=28 Identities=11% Similarity=0.128 Sum_probs=21.3
Q ss_pred CCCCCCCCCccCCCCCCCCCCCcccCHHHHHHH
Q 025641 87 PDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECM 119 (250)
Q Consensus 87 p~~i~~P~y~~~~~~~~~~~~R~VKs~eEIe~m 119 (250)
|+.+|.++|. |.+.-+|..-|++||..+
T Consensus 22 PeGVP~~Dy~-----PLLALL~R~LtdeEV~~V 49 (112)
T 2m0n_A 22 PEGVPPTDRF-----PLLALLRRTLTEEQVQEV 49 (112)
T ss_dssp CCSCCSCSCC-----GGGGCCCSSCCHHHHHHH
T ss_pred CCCCCCCccH-----HHHHHhhccCCHHHHHHH
Confidence 8889988885 445567778999999744
No 73
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=24.67 E-value=1.3e+02 Score=22.66 Aligned_cols=32 Identities=28% Similarity=0.457 Sum_probs=25.4
Q ss_pred CCcCCCCCEEEEEEeeEE-CCEEecee------eEEEcC
Q 025641 188 SRALEDGDTINIDVTVYL-NGYHGDTS------ATFFCG 219 (250)
Q Consensus 188 ~r~Lq~GDiV~IDvg~~~-~GY~aD~s------RT~~VG 219 (250)
++..++||.|.+++..+. +|-.-|.+ -+|.+|
T Consensus 40 G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG 78 (133)
T 2y78_A 40 GAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLG 78 (133)
T ss_dssp SCBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETT
T ss_pred CCCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeC
Confidence 467899999999999987 78666655 378887
No 74
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=23.79 E-value=1e+02 Score=22.77 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=26.9
Q ss_pred CCCcCCCCCEEEEEEeeEE--CCEEecee--------eEEEcCC
Q 025641 187 DSRALEDGDTINIDVTVYL--NGYHGDTS--------ATFFCGD 220 (250)
Q Consensus 187 ~~r~Lq~GDiV~IDvg~~~--~GY~aD~s--------RT~~VG~ 220 (250)
..+.++.||.|.+++..+. +|-.-|.+ .+|.+|.
T Consensus 25 ~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~ 68 (125)
T 4dip_A 25 CHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGI 68 (125)
T ss_dssp CSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTS
T ss_pred CCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCC
Confidence 4678899999999999997 78766665 3677763
No 75
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=22.79 E-value=1.8e+02 Score=21.01 Aligned_cols=52 Identities=17% Similarity=0.216 Sum_probs=36.2
Q ss_pred ccCHHHHHHHHHHHHHHH----HHHHHHHHhhcCCCCHHHHHHHHHHHH-----HHCCCCCC
Q 025641 110 VHDEKGIECMRVSGRLAA----QVLEYAGTLVKPGITTDEIDKAVHQMI-----IDNGAYPS 162 (250)
Q Consensus 110 VKs~eEIe~mR~A~~ia~----~~l~~a~~~I~pGvTe~EI~~~v~~~i-----~~~Ga~ps 162 (250)
--|++|-+.+.+|...-. .=...+.+.+ ||.|..|+.......+ ++.|..|.
T Consensus 10 ~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~v-pGRT~~q~k~ry~~l~~dv~~iesg~vp~ 70 (93)
T 2cjj_A 10 PWSAKENKAFERALAVYDKDTPDRWANVARAV-EGRTPEEVKKHYEILVEDIKYIESGKVPF 70 (93)
T ss_dssp SCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHS-TTCCHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CCCHHHHHHHHHHHHHcCCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 458999999999876542 1133344444 8999999998887763 46677764
No 76
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=21.42 E-value=49 Score=30.18 Aligned_cols=56 Identities=14% Similarity=0.269 Sum_probs=34.8
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccCCCCCCcCCCCCEEEEEEeeEECCEEece----eeE
Q 025641 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDT----SAT 215 (250)
Q Consensus 140 GvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~V~sg~N~~~~Hg~P~~r~Lq~GDiV~IDvg~~~~GY~aD~----sRT 215 (250)
-+|+.+|+..+.....+++-. + +.++..+.||.|.+|+.+..+|=.-|. ..+
T Consensus 134 ~Vtde~Vd~~l~~l~~~~a~~------------~------------~~~~~~~~gD~V~i~y~g~~dG~~fd~~~~~~~~ 189 (392)
T 1t11_A 134 EVTDADVAEMLETLRKQQATW------------K------------EVDEAAENGKRVSIDFVGSIDGVEFEGGKAENFP 189 (392)
T ss_dssp ---CTHHHHHHHHHHHHHCEE------------E------------ECSCCCCTTCEEEEEEEEESSSSCCTTCEEEEEE
T ss_pred CcCHHHHHHHHHHHHHhcCee------------e------------ecCCCCCCCCEEEEEEEEEECCEEccCCCccceE
Confidence 467888888888766665421 1 124677899999999988766643332 345
Q ss_pred EEcC
Q 025641 216 FFCG 219 (250)
Q Consensus 216 ~~VG 219 (250)
|.+|
T Consensus 190 ~~lG 193 (392)
T 1t11_A 190 LEMG 193 (392)
T ss_dssp EETT
T ss_pred EEec
Confidence 5555
Done!