Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>025643
MGRGSSTLCDSIQRLCHSLSSFFPTQLFHLSSNPPGFWFGLVSSIFLLILVYLIFSHSFL
VLSMLLWQDFVLHGVSQYQTYEDAFFSKVKDELVSAREHPAAATGVALTAGLLFMRGPRR
FLFRHTFGRLRSEEAMFVRAEKNVNELNLSGELMKKESKKLLERAALAEKEMIRGETELK
NAGNQVQRLAKQVYKVETQAADLMEGLREIPGREALKLRAEVASMASLLKRQRAMMDKQI
MKISELGVSV

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025643
        (250 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2131473 - symbol:AT4G26410 "AT4G26410" species...   522  3.6e-50   1
TAIR|locus:2055578 - symbol:AT2G45060 "AT2G45060" species...   276  4.2e-24   1


>TAIR|locus:2131473 [details] [associations]
            symbol:AT4G26410 "AT4G26410" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA]
            GO:GO:0005739 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:BT002964
            EMBL:BT004440 IPI:IPI00521531 RefSeq:NP_194371.2 UniGene:At.46172
            PRIDE:Q84K90 EnsemblPlants:AT4G26410.1 GeneID:828747
            KEGG:ath:AT4G26410 TAIR:At4g26410 InParanoid:Q84K90 OMA:PRRFLFR
            PhylomeDB:Q84K90 ProtClustDB:CLSN2680097 Genevestigator:Q84K90
            InterPro:IPR016803 PIRSF:PIRSF022280 Uniprot:Q84K90
        Length = 263

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 103/183 (56%), Positives = 133/183 (72%)

Query:    68 QDFVLHGVSQYQTYEDAFFSKVKDELVSAREHPXXXXXXXXXXXXXFMRGPRRFLFRHTF 127
             QDF+ H ++QY+TYE+AFFSKV DEL+ A+EHP              MRGPRRFLFR+T 
Sbjct:    81 QDFIPHALTQYKTYENAFFSKVTDELIYAKEHPAAAIGIGVAASLVLMRGPRRFLFRNTL 140

Query:   128 GRLRSEEAMFVRAEKNVNELNXXXXXXXXXXXXXXXRAALAEKEMIRGETELKNAGNQVQ 187
             GR +SEEA F++AEK+V ELN               R ALAEK+M RG +EL N+GN + 
Sbjct:   141 GRFQSEEAQFLKAEKHVQELNMSVDLMKKESRKLLERTALAEKDMKRGLSELMNSGNDIH 200

Query:   188 RLAKQVYKVETQAADLMEGLREIPGREALKLRAEVASMASLLKRQRAMMDKQIMKISELG 247
             RLAK V+K E +AADLM+GLR+IPGR+A+KLRAEVASM SLL+++R  ++K+IM +S+LG
Sbjct:   201 RLAKSVHKAECEAADLMDGLRQIPGRDAIKLRAEVASMTSLLRQKRIALNKRIMGMSDLG 260

Query:   248 VSV 250
             VSV
Sbjct:   261 VSV 263


>TAIR|locus:2055578 [details] [associations]
            symbol:AT2G45060 "AT2G45060" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006007
            "glucose catabolic process" evidence=RCA] GO:GO:0005739
            EMBL:CP002685 GenomeReviews:CT485783_GR InterPro:IPR016803
            PIRSF:PIRSF022280 EMBL:AY045585 EMBL:AY085438 EMBL:AY143908
            IPI:IPI00521606 RefSeq:NP_566034.1 UniGene:At.26163 PaxDb:Q94AZ5
            PRIDE:Q94AZ5 EnsemblPlants:AT2G45060.1 GeneID:819113
            KEGG:ath:AT2G45060 TAIR:At2g45060 eggNOG:NOG318876
            HOGENOM:HOG000005752 InParanoid:Q94AZ5 OMA:ISNYGIS PhylomeDB:Q94AZ5
            ProtClustDB:CLSN2688937 Genevestigator:Q94AZ5 Uniprot:Q94AZ5
        Length = 272

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 60/175 (34%), Positives = 91/175 (52%)

Query:    76 SQYQTYEDAFFSKVKDELVSAREHPXXXXXXXXXXXXXFMRGPRRFLFRHTFGRLRSEEA 135
             S+Y  YE   F K+KD +  A  HP              ++  RRF++ +T     SEEA
Sbjct:    98 SEYNVYEQMVFGKIKDGVNVAASHPLISGTLAFGVGIFALKKTRRFVYYNTVRMFVSEEA 157

Query:   136 MFVRAEKNVNELNXXXXXXXXXXXXXXXRAALAEKEMIRGETELKNAGNQVQRLAKQVYK 195
             +  RA+  V EL                 A +AE+E IRG  +L+ AG Q++      YK
Sbjct:   158 LLSRADLKVKELRQSMDRLKAESEKLERVATVAEEEFIRGRMKLRQAGKQIRGAISSAYK 217

Query:   196 VETQAADLMEGLREIPGREALKLRAEVASMASLLKRQRAMMDKQIMKISELGVSV 250
             +E QAA L + L+E+P REA + R +++  AS +K++R  + K++ KIS  G+SV
Sbjct:   218 IEKQAAGLKDVLKELPTREASRFRTQISKRASEVKQERNALTKEVNKISNYGISV 272


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.136   0.389    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      250       222   0.00096  112 3  11 22  0.45    32
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  154 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.02u 0.11s 19.13t   Elapsed:  00:00:01
  Total cpu time:  19.02u 0.11s 19.13t   Elapsed:  00:00:01
  Start:  Mon May 20 23:26:59 2013   End:  Mon May 20 23:27:00 2013

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