BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025644
(250 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8J2J3|AMN1_PICAD Antagonist of mitotic exit network protein 1 OS=Pichia angusta
(strain ATCC 26012 / NRRL Y-7560 / DL-1) GN=AMN1 PE=3
SV=1
Length = 511
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 1 MSLADSSWEILDISGSDV-SDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSL 59
+ L + + L + GS V D L ++A + +L +D+ C+ IT AG+ HC +
Sbjct: 279 LHLYTAKLKKLVLPGSKVVDDVYLQQIAPLMPNLVHLDLRACEHITDAGLYAIGTHCPKI 338
Query: 60 ETLRCG 65
ETL CG
Sbjct: 339 ETLNCG 344
>sp|Q9VHH9|JHD1_DROME JmjC domain-containing histone demethylation protein 1 OS=Drosophila
melanogaster GN=Kdm2 PE=1 SV=2
Length = 1345
Score = 39.7 bits (91), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 9 EILDISGSDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEF 52
+++ ++G+D+SD + + Q L+ +D+S C RIT AGV++
Sbjct: 1215 KVMKLAGTDISDVAVRYITQSLPYLRHLDLSSCQRITDAGVAQI 1258
>sp|Q6BIN3|AMN1_DEBHA Antagonist of mitotic exit network protein 1 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=AMN1 PE=3 SV=2
Length = 536
Score = 39.3 bits (90), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 13 ISGSDVSDFGLVK-VAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGSPRSN 71
I+GS V D G + VA+ C +L+ +DI C+ I+ +G+ + C L T+ G + N
Sbjct: 320 ITGSKVIDDGFLSMVAKKCPNLEVLDIRACELISDSGIYQIAKRCTKLTTVNFGRKNKGN 379
Query: 72 HAARRCLGIL 81
+ IL
Sbjct: 380 LITDSSICIL 389
>sp|Q9UKC9|FBXL2_HUMAN F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3
Length = 423
Score = 37.7 bits (86), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 10/124 (8%)
Query: 16 SDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGSPRSNHAAR 75
+ + D L + C L ++++ C RIT GV + CH L+ L G A+
Sbjct: 193 TQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASL 252
Query: 76 RCLGILKPKLNDVEGDSWEELVNTDIG--------HGAQSLRWFVWPNIDKDSIEMMSTE 127
LG+ P+L +E L TD G H + + I ++ +S
Sbjct: 253 TALGLNCPRLQILEAARCSHL--TDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIH 310
Query: 128 CPRI 131
CP++
Sbjct: 311 CPKL 314
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 6 SSWEILDISGS-DVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRC 64
S + LD++ +++ L +++ C++L+ +++S CD+IT G+ + C L+ L
Sbjct: 130 SKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLL 189
Query: 65 GGSPR-----SNHAARRCLGILKPKLNDVEGDSWEELVNTDIG-HGAQSLRWFVWPNIDK 118
G + H C ++ L + E +V G H Q+L N+
Sbjct: 190 RGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTD 249
Query: 119 DSIEMMSTECPRI 131
S+ + CPR+
Sbjct: 250 ASLTALGLNCPRL 262
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 14 SGSDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGSPRSNHA 73
S S ++D G+V++ + C L+A+ +S C +T A ++ L+C L+ L + R +H
Sbjct: 217 SCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILE---AARCSHL 273
Query: 74 ARRCLGILKPKLNDVEGDSWEELV 97
+L +++E EE +
Sbjct: 274 TDAGFTLLARNCHELEKMDLEECI 297
>sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1
Length = 423
Score = 37.7 bits (86), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 10/124 (8%)
Query: 16 SDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGSPRSNHAAR 75
+ + D L + C L ++++ C RIT GV + CH L+ L G A+
Sbjct: 193 TQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASL 252
Query: 76 RCLGILKPKLNDVEGDSWEELVNTDIG--------HGAQSLRWFVWPNIDKDSIEMMSTE 127
LG+ P+L +E L TD G H + + I ++ +S
Sbjct: 253 TALGLNCPRLQILEAARCSHL--TDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIH 310
Query: 128 CPRI 131
CP++
Sbjct: 311 CPKL 314
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 6 SSWEILDISGS-DVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRC 64
S + LD++ +++ L +++ C++L+ +++S CD+IT G+ + C L+ L
Sbjct: 130 SKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLL 189
Query: 65 GGSPR-----SNHAARRCLGILKPKLNDVEGDSWEELVNTDIG-HGAQSLRWFVWPNIDK 118
G + H C ++ L + E +V G H Q+L N+
Sbjct: 190 RGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTD 249
Query: 119 DSIEMMSTECPRI 131
S+ + CPR+
Sbjct: 250 ASLTALGLNCPRL 262
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 14 SGSDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGSPRSNHA 73
S S ++D G+V++ + C L+A+ +S C +T A ++ L+C L+ L + R +H
Sbjct: 217 SCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILE---AARCSHL 273
Query: 74 ARRCLGILKPKLNDVEGDSWEELV 97
+L +++E EE +
Sbjct: 274 TDAGFTLLARNCHELEKMDLEECI 297
>sp|Q9C5D2|FBL4_ARATH F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2
SV=1
Length = 610
Score = 37.4 bits (85), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 6 SSWEILDISGSDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHC 56
+S + LD+ G V D GL V + CK L+ +++ C+ +T GV + ++ C
Sbjct: 166 TSLKSLDLQGCYVGDQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGC 216
Score = 34.7 bits (78), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 52/134 (38%), Gaps = 15/134 (11%)
Query: 8 WEILDISGSDVSDFGLVKVAQMCKSLKAVDISCCD--RITAAGVSEFLLHCHSLETLRCG 65
E+L + + D GL+ VAQ C LK + + C + A V E C SLE L
Sbjct: 246 LEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGEL---CTSLERLALY 302
Query: 66 GSPRSNHAARRCLGILKPKLNDVE-GDSWEELVNTD----IGHGAQSLRWF---VWPNID 117
R +G KL D+ D + V+ I HG + L NI
Sbjct: 303 SFQHFTDKGMRAIGKGSKKLKDLTLSDCY--FVSCKGLEAIAHGCKELERVEINGCHNIG 360
Query: 118 KDSIEMMSTECPRI 131
IE + CPR+
Sbjct: 361 TRGIEAIGKSCPRL 374
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 7 SWEILD-ISGSDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETL 62
S EIL + S + D + +A+ C++LK + I C I G+ HC SL L
Sbjct: 399 SLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTEL 455
>sp|P34284|YKK7_CAEEL Uncharacterized F-box/LRR-repeat protein C02F5.7 OS=Caenorhabditis
elegans GN=C02F5.7 PE=4 SV=3
Length = 466
Score = 37.4 bits (85), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 16 SDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETL---RCGGSPRSNH 72
S ++D + + C +L ++IS CD I GV L +C SL+TL C G +
Sbjct: 186 SSITDRAMKYIGDGCPNLSYLNISWCDAIQDRGVQIILSNCKSLDTLILRGCEGLTENVF 245
Query: 73 AARRC-LGILKPKLNDVEGDSWEELVNTDIGHGAQSLRWFVWPNIDKDS 120
+ +G +K KLN ++ ++ +I +GA +L + N ++ S
Sbjct: 246 GSVEAHMGAIK-KLNLLQCFQLTDITVQNIANGATALEYLCMSNCNQIS 293
>sp|Q8BH16|FBXL2_MOUSE F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=1 SV=1
Length = 423
Score = 37.4 bits (85), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 10/124 (8%)
Query: 16 SDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGSPRSNHAAR 75
+ + D L + C L ++++ C RIT GV + CH L+ L G A+
Sbjct: 193 TQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDASL 252
Query: 76 RCLGILKPKLNDVEGDSWEELVNTDIG--------HGAQSLRWFVWPNIDKDSIEMMSTE 127
LG+ P+L +E L TD G H + + I ++ +S
Sbjct: 253 TALGLNCPRLQVLEAARCSHL--TDAGFTLLARNCHELEKMDLEECVLITDSTLVQLSIH 310
Query: 128 CPRI 131
CP++
Sbjct: 311 CPKL 314
Score = 34.3 bits (77), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Query: 6 SSWEILDISGS-DVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRC 64
S + LD++ V++ L +++ C++L+ +++S CD+IT G+ + C L+ L
Sbjct: 130 SKLKHLDLTSCVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLL 189
Query: 65 GGSPR-----SNHAARRCLGILKPKLNDVEGDSWEELVNTDIG-HGAQSLRWFVWPNIDK 118
G + H C ++ L + + +V G H Q+L N+
Sbjct: 190 RGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTD 249
Query: 119 DSIEMMSTECPRIIV 133
S+ + CPR+ V
Sbjct: 250 ASLTALGLNCPRLQV 264
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 14 SGSDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGSPRSNHA 73
S S ++D G+V++ + C L+A+ +S C +T A ++ L+C L+ L + R +H
Sbjct: 217 SCSRITDDGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQVLE---AARCSHL 273
Query: 74 ARRCLGILKPKLNDVEGDSWEELV 97
+L +++E EE V
Sbjct: 274 TDAGFTLLARNCHELEKMDLEECV 297
>sp|A7Z026|PPR37_BOVIN Protein phosphatase 1 regulatory subunit 37 OS=Bos taurus
GN=PPP1R37 PE=2 SV=1
Length = 699
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 12/80 (15%)
Query: 5 DSSWEILDISGSDVSDFGLVKVAQMCKSLK------AVDISCCDRITAAGVSEF---LLH 55
+ S +ILD+ + V D GL A +C+ LK A + +++T G++ L H
Sbjct: 275 NCSLQILDLRNNHVLDSGL---AYICEGLKEQRKGLATLVLWNNQLTHTGMAFLGMTLPH 331
Query: 56 CHSLETLRCGGSPRSNHAAR 75
HSLETL G +P N R
Sbjct: 332 THSLETLNLGHNPIGNEGVR 351
>sp|Q6FRM1|AMN1_CANGA Antagonist of mitotic exit network protein 1 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=AMN1 PE=3 SV=1
Length = 511
Score = 36.6 bits (83), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 18 VSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCG 65
++D L+++ + +LK +D+ CD IT AG+ HC L + G
Sbjct: 316 INDSYLIQICRYLPNLKVLDLRACDNITDAGIVAVGTHCKQLVSCNIG 363
>sp|Q8LB33|FB330_ARATH F-box protein At3g58530 OS=Arabidopsis thaliana GN=At3g58530 PE=2
SV=1
Length = 353
Score = 36.6 bits (83), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 11 LDISGS-DVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGG 66
LDI G+ ++SD G+ +A+ C L++++++ C RIT AGV+ C SLE L G
Sbjct: 245 LDICGAQNISDEGIGHIAK-CNKLESLNLTWCVRITDAGVNTIANSCTSLEFLSLFG 300
>sp|Q8NEE6|FXL13_HUMAN F-box/LRR-repeat protein 13 OS=Homo sapiens GN=FBXL13 PE=2 SV=3
Length = 735
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 34/180 (18%)
Query: 11 LDISGSDVSDFGLVKVAQ----------------------MCKS---LKAVDISCCDRIT 45
+D+SG+D+S+ GL +++ CKS L+ +D+S C +++
Sbjct: 535 IDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQLS 594
Query: 46 AAGVSEFLLHCHSLETLRCGGSPRSNHAARRCLGILKPKLN--DVEGDS-WEELVNTDIG 102
+ ++C +L +L G P+ +A L L+ D+ G + + D+
Sbjct: 595 DMIIKALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQ 654
Query: 103 HGAQSLRWF---VWPNIDKDSIEMMSTECPRIIVNPKPSPFGFRGFEVPREAFPDITLDD 159
G + LR NI K + + MS++ + N P R F RE P LD+
Sbjct: 655 IGCKQLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPP---RWFGYDREGNPVTELDN 711
>sp|Q9C626|FB37_ARATH F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2
SV=1
Length = 518
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 18 VSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCG 65
+ D LVK++ C++LK + + C +T G++ F +C L+ CG
Sbjct: 117 IGDEALVKISLRCRNLKRLKLRACRELTDVGMAAFAENCKDLKIFSCG 164
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 17 DVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETL 62
+++D G+ A+ CK LK CD A GV L HC +LE L
Sbjct: 142 ELTDVGMAAFAENCKDLKIFSCGSCD-FGAKGVKAVLDHCSNLEEL 186
>sp|P38285|AMN1_YEAST Antagonist of mitotic exit network protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=AMN1 PE=1
SV=1
Length = 549
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 9 EILDISGS-DVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGS 67
E L I G+ ++ D L++++Q +LK + + CD ++ +GV L+C L+T G
Sbjct: 339 EKLIIPGNKNIDDNFLLRLSQSIPNLKHLVLRACDNVSDSGVVCIALNCPKLKTFNIGRH 398
Query: 68 PRSN 71
R N
Sbjct: 399 RRGN 402
>sp|Q9FE83|SKIP2_ARATH F-box protein SKIP2 OS=Arabidopsis thaliana GN=SKIP2 PE=1 SV=1
Length = 527
Score = 35.0 bits (79), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 17 DVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETL 62
+++D G+ A+ CK+LK + + C+ A GV+ L HC LE L
Sbjct: 145 EITDLGMEDFAKNCKNLKKLSVGSCN-FGAKGVNAMLEHCKLLEEL 189
>sp|Q5BJ29|FBXL7_MOUSE F-box/LRR-repeat protein 7 OS=Mus musculus GN=Fbxl7 PE=1 SV=1
Length = 491
Score = 35.0 bits (79), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 10 ILDISGSD---VSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGG 66
I ++S SD VSDFGL ++A++ L+ + I+ C RIT G+ +C L L G
Sbjct: 326 IKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRITDVGIRYVAKYCSKLRYLNARG 385
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 6 SSWEILDISGSD-VSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETL 62
S L+ G + ++D G+ +A+ C LK++DI C ++ G+ L+C +L+ L
Sbjct: 376 SKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLESLALNCFNLKRL 433
>sp|A1A5X2|FBXL7_DANRE F-box/LRR-repeat protein 7 OS=Danio rerio GN=fbxl7 PE=2 SV=1
Length = 489
Score = 34.7 bits (78), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 10 ILDISGSD---VSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGG 66
+ ++S SD +SDFGL ++A++ L+ + I+ C RIT GV +C L L G
Sbjct: 324 VRELSVSDCRFISDFGLREIAKLEGRLRYLSIAHCSRITDVGVRYVAKYCSRLRYLNARG 383
Query: 67 SPRSN-----HAARRCLGI 80
H A+ CL +
Sbjct: 384 CEGLTDHGIEHLAKSCLKL 402
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 34.7 bits (78), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 10/126 (7%)
Query: 16 SDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGSPRSNHAAR 75
+ + D L + C L +++ C +IT G+ CH L++L G A
Sbjct: 206 TQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAIL 265
Query: 76 RCLGILKPKLNDVEGDSWEELVNTDIG--------HGAQSLRWFVWPNIDKDSIEMMSTE 127
LG P+L +E +L TD+G H + + I ++ +S
Sbjct: 266 NALGQNCPRLRILEVARCSQL--TDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIH 323
Query: 128 CPRIIV 133
CPR+ V
Sbjct: 324 CPRLQV 329
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 10 ILDIS-GSDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGSP 68
IL+++ S ++D G +A+ C L+ +D+ C +IT + + + +HC L+ L
Sbjct: 277 ILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCE 336
Query: 69 RSNHAARRCLG---ILKPKLNDVEGDSWEELVNTDI-----GHGAQSLRWFVWPNIDKDS 120
R LG +L +E D+ + + + H + + + I +
Sbjct: 337 LITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAG 396
Query: 121 IEMMSTECPRIIVNPKPSP 139
I+ + T P I V+ +P
Sbjct: 397 IKRLRTHLPNIKVHAYFAP 415
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 34.7 bits (78), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 10/126 (7%)
Query: 16 SDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGSPRSNHAAR 75
+ + D L + C L +++ C +IT G+ CH L++L G A
Sbjct: 206 TQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAIL 265
Query: 76 RCLGILKPKLNDVEGDSWEELVNTDIG--------HGAQSLRWFVWPNIDKDSIEMMSTE 127
LG P+L +E +L TD+G H + + I ++ +S
Sbjct: 266 NALGQNCPRLRILEVARCSQL--TDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIH 323
Query: 128 CPRIIV 133
CPR+ V
Sbjct: 324 CPRLQV 329
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 10 ILDIS-GSDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGSP 68
IL+++ S ++D G +A+ C L+ +D+ C +IT + + + +HC L+ L
Sbjct: 277 ILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCE 336
Query: 69 RSNHAARRCLG---ILKPKLNDVEGDSWEELVNTDI-----GHGAQSLRWFVWPNIDKDS 120
R LG +L +E D+ + + + H + + + I +
Sbjct: 337 LITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAG 396
Query: 121 IEMMSTECPRIIVNPKPSP 139
I+ + T P I V+ +P
Sbjct: 397 IKRLRTHLPNIKVHAYFAP 415
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 34.7 bits (78), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 10/126 (7%)
Query: 16 SDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGSPRSNHAAR 75
+ + D L + C L +++ C +IT G+ CH L++L G A
Sbjct: 206 TQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAIL 265
Query: 76 RCLGILKPKLNDVEGDSWEELVNTDIG--------HGAQSLRWFVWPNIDKDSIEMMSTE 127
LG P+L +E +L TD+G H + + I ++ +S
Sbjct: 266 NALGQNCPRLRILEVARCSQL--TDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIH 323
Query: 128 CPRIIV 133
CPR+ V
Sbjct: 324 CPRLQV 329
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 10 ILDIS-GSDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGSP 68
IL+++ S ++D G +A+ C L+ +D+ C +IT + + + +HC L+ L
Sbjct: 277 ILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCE 336
Query: 69 RSNHAARRCLG---ILKPKLNDVEGDSWEELVNTDI-----GHGAQSLRWFVWPNIDKDS 120
R LG +L +E D+ + + + H + + + I +
Sbjct: 337 LITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAG 396
Query: 121 IEMMSTECPRIIVNPKPSP 139
I+ + T P I V+ +P
Sbjct: 397 IKRLRTHLPNIKVHAYFAP 415
>sp|A6H779|FBXL2_BOVIN F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1
Length = 423
Score = 34.3 bits (77), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 14 SGSDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGSPRSNHA 73
S S V+D G+V++ + C L+A+ +S C +T A ++ L+C L+ L + R +H
Sbjct: 217 SCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTDASLTALALNCPRLQILE---AARCSHL 273
Query: 74 ARRCLGILKPKLNDVEGDSWEELV 97
+L +D+E EE +
Sbjct: 274 TDAGFTLLARNCHDLEKMDLEECI 297
>sp|Q9UJT9|FBXL7_HUMAN F-box/LRR-repeat protein 7 OS=Homo sapiens GN=FBXL7 PE=2 SV=1
Length = 491
Score = 34.3 bits (77), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 10 ILDISGSD---VSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGG 66
I ++S SD VSDFGL ++A++ L+ + I+ C R+T G+ +C L L G
Sbjct: 326 IKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRVTDVGIRYVAKYCSKLRYLNARG 385
Score = 31.6 bits (70), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 6 SSWEILDISGSD-VSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETL 62
S L+ G + ++D G+ +A+ C LK++DI C ++ G+ L+C +L+ L
Sbjct: 376 SKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLECLALNCFNLKRL 433
>sp|Q8W104|FBL17_ARATH F-box/LRR-repeat protein 17 OS=Arabidopsis thaliana GN=FBL17 PE=1
SV=1
Length = 593
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 7 SWEILDISGSDVSDFGLVKVAQMC-KSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCG 65
+ E+LD+SGS ++D GL + + +L + ++ C IT++G+ LE + CG
Sbjct: 379 NLELLDLSGSSITDTGLGMICDVLPDTLSKLLVALCPNITSSGIQFATAQLPLLELMDCG 438
>sp|Q9SRR1|FBL12_ARATH F-box/LRR-repeat protein 12 OS=Arabidopsis thaliana GN=FBL12 PE=2
SV=1
Length = 395
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 18 VSDFGLVKVAQMCKSLKAVDISCCDRITAAGVS 50
VSDFG+ ++Q C L++V IS C IT G S
Sbjct: 181 VSDFGIKALSQACLQLESVKISNCKSITGVGFS 213
>sp|Q5ALR8|AMN1_CANAL Antagonist of mitotic exit network protein 1 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=AMN1 PE=3 SV=1
Length = 658
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 11 LDISGSD-VSDFGLVKVAQM-C-KSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGS 67
L I+GS + D L+K+ Q C +L+ +D+ C+ IT G+ + L+C +L + G
Sbjct: 402 LIITGSKTIDDEFLMKLGQFKCGDNLQILDLRACELITDFGIYQLSLYCRNLTFINFGRK 461
Query: 68 P 68
P
Sbjct: 462 P 462
>sp|Q9FDX1|SKIP1_ARATH F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1
Length = 300
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 14 SGSDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLR 63
S +V+D + K+A C+SLK +DIS C I+ + +C +L L+
Sbjct: 121 SSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILK 170
>sp|Q5VMP0|MAX2_ORYSJ F-box/LRR-repeat MAX2 homolog OS=Oryza sativa subsp. japonica GN=D3
PE=2 SV=2
Length = 720
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 12/60 (20%)
Query: 17 DVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEF------------LLHCHSLETLRC 64
D++D L + + C+ L I CD +T+AG+ +LHC L T C
Sbjct: 394 DLTDASLAAIGRGCRRLAKFGIHGCDLVTSAGIRRLAFTLRPTLKEVTVLHCRLLHTAEC 453
>sp|C8V4D4|GRRA_EMENI SCF E3 ubiquitin ligase complex F-box protein grrA OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=grrA PE=2 SV=1
Length = 585
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 9/37 (24%), Positives = 24/37 (64%)
Query: 16 SDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEF 52
S+++D ++++ + C ++ +D++CC R+T V +
Sbjct: 383 SNINDSAVIQLVKSCNRIRYIDLACCSRLTDRSVQQL 419
>sp|Q8CDU4|FXL13_MOUSE F-box/LRR-repeat protein 13 OS=Mus musculus GN=Fbxl13 PE=2 SV=2
Length = 790
Score = 32.3 bits (72), Expect = 3.1, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 9 EILDIS-GSDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGG 66
E LD+S S ++D + +A C + +++I+ C +IT AG+ CH L L G
Sbjct: 634 EHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDAGMEILSARCHYLHILDISG 692
Score = 31.6 bits (70), Expect = 6.1, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 1 MSLADSSWEILDISGSD---VSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCH 57
M++ ++ ++S SD ++DFG+ + L+ +D+S C ++T + + C
Sbjct: 598 MTILSRHRKLREVSVSDCVNITDFGIRAYCKTSLLLEHLDVSYCSQLTDDIIKTIAIFCT 657
Query: 58 SLETLRCGGSPRSNHAARRCL 78
+ +L G P+ A L
Sbjct: 658 RITSLNIAGCPKITDAGMEIL 678
>sp|Q8C7B6|FXL22_MOUSE F-box and leucine-rich protein 22 OS=Mus musculus GN=Fbxl22 PE=1
SV=1
Length = 236
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 16 SDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLR 63
S V+DF L++V C +L +V +S C +T ++ LL C L TLR
Sbjct: 100 SLVNDF-LLQVCNRCPNLTSVTLSGCGHVTDDCLARLLLSCPRLRTLR 146
>sp|Q9SN10|FBL16_ARATH F-box/LRR-repeat protein 16 OS=Arabidopsis thaliana GN=FBL16 PE=2
SV=1
Length = 522
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 17 DVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETL 62
+++D G+ A+ CKSL+ + C A G++ L HC LE L
Sbjct: 143 EITDLGMESFARNCKSLRKLSCGSCT-FGAKGINAMLEHCKVLEEL 187
Score = 31.2 bits (69), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 18 VSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCG 65
+SD L V+ C +L V + C IT G+ F +C SL L CG
Sbjct: 118 LSDEALFIVSIRCSNLIRVKLRGCREITDLGMESFARNCKSLRKLSCG 165
>sp|Q75A58|AMN1_ASHGO Antagonist of mitotic exit network protein 1 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=AMN1 PE=3 SV=1
Length = 392
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 18 VSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCG 65
VSD L++ L+ +D+ CDR++ AGV +C L T+ G
Sbjct: 198 VSDDFLIEACVHLPRLQVLDLRACDRVSDAGVVAVATNCPRLHTVNLG 245
>sp|Q5F4A3|AN32E_CHICK Acidic leucine-rich nuclear phosphoprotein 32 family member E
OS=Gallus gallus GN=ANP32E PE=2 SV=1
Length = 256
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 11 LDISGSDVSDFGLVKVAQMCKSLKAVDISCCD 42
L++SG+ + D G V+ Q K+LK++D+ C+
Sbjct: 93 LNLSGNKIKDLGTVEALQNLKNLKSLDLFNCE 124
>sp|Q708Y0|EBF2_ARATH EIN3-binding F-box protein 2 OS=Arabidopsis thaliana GN=EBF2 PE=1
SV=1
Length = 623
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 19/121 (15%)
Query: 16 SDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETL---RCGGSPRSNH 72
S V+D GL VA C SL+ V + ++ G+SE C +E L RC G S
Sbjct: 152 SKVTDVGLGAVAHGCPSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGL 211
Query: 73 A--ARRCLGILKPKLNDVEGDSWEELVNTDIGHGAQSLRWFVWPNIDKDSIEMMSTECPR 130
A C+ L+D+ DS G G + LR ++ SI + S CPR
Sbjct: 212 VAIAENCV-----NLSDLTIDSCS-------GVGNEGLRAIARRCVNLRSISIRS--CPR 257
Query: 131 I 131
I
Sbjct: 258 I 258
>sp|Q0P4D1|AMN1_DANRE Protein AMN1 homolog OS=Danio rerio GN=amn1 PE=2 SV=1
Length = 249
Score = 31.2 bits (69), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 16 SDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETL 62
++++ GL +A C L+ VD++ C +T +G+ HC LE +
Sbjct: 91 AEITSEGLEVLAPRCPYLQVVDLTGCTAVTDSGIQALARHCKCLEVI 137
>sp|A2RT62|FXL16_MOUSE F-box/LRR-repeat protein 16 OS=Mus musculus GN=Fbxl16 PE=2 SV=1
Length = 479
Score = 31.2 bits (69), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 11 LDISG-SDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETL---RC 64
L +SG S V+D G+ VA+ + L+++D+S C RIT + H LE L RC
Sbjct: 325 LSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRC 382
>sp|Q5MJ12|FXL16_RAT F-box/LRR-repeat protein 16 OS=Rattus norvegicus GN=Fbxl16 PE=2
SV=1
Length = 479
Score = 30.8 bits (68), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 11 LDISG-SDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETL---RC 64
L +SG S V+D G+ VA+ + L+++D+S C RIT + H LE L RC
Sbjct: 325 LSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRC 382
>sp|Q8N461|FXL16_HUMAN F-box/LRR-repeat protein 16 OS=Homo sapiens GN=FBXL16 PE=1 SV=2
Length = 479
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 11 LDISG-SDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETL---RC 64
L +SG S V+D G+ VA+ + L+++D+S C RIT + H LE L RC
Sbjct: 325 LSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRC 382
>sp|Q8N1E6|FXL14_HUMAN F-box/LRR-repeat protein 14 OS=Homo sapiens GN=FBXL14 PE=1 SV=1
Length = 418
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 9 EILDISGS-DVSDFGLVKV-AQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGG 66
E L++SG +++D GL Q SL+A+++S C +IT + + + LE L GG
Sbjct: 93 ESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLELGG 152
Query: 67 SPRSNHAARRCLGILKPKLNDVEGDSWEELVNTDIGH 103
+ + +L + S L + IGH
Sbjct: 153 CSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGH 189
>sp|Q3EC97|FBL14_ARATH F-box/LRR-repeat protein 14 OS=Arabidopsis thaliana GN=FBL14 PE=2
SV=1
Length = 480
Score = 30.8 bits (68), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 15 GSDVSDFGLVKVAQMCKSLKAVDISCCDRITAAGVSEFLLHCHSLETLRCGGSPR 69
G V D GL+ + C SL + +S C IT G+ L C L +L+ +PR
Sbjct: 94 GKQVDDQGLLVLTTNCHSLTDLTLSFCTFITDVGIGH-LSSCPELSSLKLNFAPR 147
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,316,348
Number of Sequences: 539616
Number of extensions: 3643538
Number of successful extensions: 8469
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 8302
Number of HSP's gapped (non-prelim): 179
length of query: 250
length of database: 191,569,459
effective HSP length: 115
effective length of query: 135
effective length of database: 129,513,619
effective search space: 17484338565
effective search space used: 17484338565
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)