Query 025646
Match_columns 250
No_of_seqs 121 out of 1171
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 07:59:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025646.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025646hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02879 L-ascorbate peroxidas 100.0 1.6E-77 3.4E-82 527.2 23.6 249 1-250 2-250 (251)
2 PLN02364 L-ascorbate peroxidas 100.0 2.6E-77 5.6E-82 526.6 23.6 249 1-250 1-250 (250)
3 PLN02608 L-ascorbate peroxidas 100.0 1.1E-75 2.4E-80 523.5 23.5 244 5-249 3-246 (289)
4 cd00691 ascorbate_peroxidase A 100.0 1.8E-71 3.8E-76 491.1 22.4 243 6-249 2-252 (253)
5 PLN03030 cationic peroxidase; 100.0 9.8E-69 2.1E-73 484.9 17.2 229 2-249 31-310 (324)
6 cd00693 secretory_peroxidase H 100.0 8.9E-68 1.9E-72 477.4 19.2 229 2-249 8-285 (298)
7 cd00692 ligninase Ligninase an 100.0 1.1E-62 2.4E-67 446.9 22.1 234 8-249 16-277 (328)
8 cd00649 catalase_peroxidase_1 100.0 1.3E-59 2.8E-64 433.4 19.1 234 15-249 43-397 (409)
9 cd00314 plant_peroxidase_like 100.0 1.6E-58 3.4E-63 409.8 19.3 226 12-244 3-255 (255)
10 PF00141 peroxidase: Peroxidas 100.0 3.1E-58 6.7E-63 402.4 7.0 198 12-227 1-230 (230)
11 TIGR00198 cat_per_HPI catalase 100.0 4.6E-56 1E-60 433.0 18.5 234 11-245 44-398 (716)
12 PRK15061 catalase/hydroperoxid 100.0 5.4E-54 1.2E-58 416.5 18.7 232 15-247 55-408 (726)
13 cd08201 plant_peroxidase_like_ 100.0 9.5E-53 2.1E-57 369.8 14.5 209 28-244 37-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 1.8E-50 3.9E-55 359.4 19.5 218 26-246 23-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 5.5E-45 1.2E-49 355.5 19.5 218 26-246 441-709 (716)
16 PRK15061 catalase/hydroperoxid 100.0 6.4E-44 1.4E-48 346.4 20.0 218 26-246 448-721 (726)
17 COG0376 KatG Catalase (peroxid 100.0 2.5E-40 5.4E-45 308.9 16.6 231 16-247 69-417 (730)
18 COG0376 KatG Catalase (peroxid 99.9 5.5E-23 1.2E-27 193.0 12.4 219 25-246 457-725 (730)
19 cd07922 CarBa CarBa is the A s 46.8 13 0.00028 27.4 1.6 31 219-249 18-59 (81)
20 PRK12346 transaldolase A; Prov 37.8 41 0.00089 31.1 3.8 85 78-165 139-241 (316)
21 PF08383 Maf_N: Maf N-terminal 36.5 23 0.0005 21.8 1.3 15 147-161 19-34 (35)
22 cd00957 Transaldolase_TalAB Tr 35.2 49 0.0011 30.5 3.8 84 77-163 137-238 (313)
23 PTZ00411 transaldolase-like pr 32.7 51 0.0011 30.7 3.5 86 77-165 149-252 (333)
24 PRK05269 transaldolase B; Prov 28.4 43 0.00093 30.9 2.3 86 77-165 139-242 (318)
25 PRK12309 transaldolase/EF-hand 28.2 87 0.0019 29.8 4.4 86 77-165 143-246 (391)
26 TIGR00874 talAB transaldolase. 23.9 70 0.0015 29.6 2.8 86 77-165 137-240 (317)
27 cd00439 Transaldolase Transald 20.2 54 0.0012 29.1 1.2 74 77-153 128-209 (252)
No 1
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=1.6e-77 Score=527.17 Aligned_cols=249 Identities=78% Similarity=1.328 Sum_probs=242.9
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHhhhhhcCCchhhHHHhhhcccCccccCCCCCCCCCcccchhhhhccccCchHHHHHH
Q 025646 1 MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRL 80 (250)
Q Consensus 1 ~~~~cp~~~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~ 80 (250)
|++.||.+.+.++++++.++++|++++.++.++|.+|||+||||++||..++.|||||||++++|+++++|.||+.++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~~E~~~~~N~gL~~~~~~ 81 (251)
T PLN02879 2 VKKSYPEVKEEYKKAVQRCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHPQELAHDANNGLDIAVRL 81 (251)
T ss_pred CcccCCCccHHHHHHHHHHHHHHHHHHhCCCchhHhHHHHHhhhccccCCCCCCCCCeeecChhhccCCCcCChHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHhHHHhCCCCchhhHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhcCCChhhhhhhc
Q 025646 81 LEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS 160 (250)
Q Consensus 81 i~~~k~~~~~VS~AD~ialaa~~av~~~GGP~~~~~~GR~D~~~~~~~~~lP~~~~~~~~l~~~F~~~~Gls~~e~VaL~ 160 (250)
|++||+++++|||||||+|||++||+++|||.|+|++||+|+.+++++++||.|+.++++|++.| +++||+++|||||+
T Consensus 82 i~~iK~~~~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~~~~lP~p~~~~~~l~~~F-~~~Gl~~~dlVALs 160 (251)
T PLN02879 82 LDPIKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVF-GRMGLNDKDIVALS 160 (251)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCcccCCCCCCCCHHHHHHHH-HHcCCCHHHHeeee
Confidence 99999999999999999999999999999999999999999999988899999999999999999 99999999999999
Q ss_pred cCccccccccCCCCCCCCCCCCCcccChHHHHHHhhccCCCcccccccccccCCCCcHHHHHHhhhChHHHHHHHHHHHH
Q 025646 161 GGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHL 240 (250)
Q Consensus 161 GaHtiG~~~~~~~~~~g~~~~tp~~fDn~Yf~~ll~~~~~gll~l~sD~~L~~d~~t~~~v~~yA~~~~~F~~~F~~Am~ 240 (250)
||||||++||.++|+.|+|+.||.+|||+||++|+.++.+|+++|+||++|+.|++|+++|++||+||+.|+++|+.||.
T Consensus 161 GaHTiG~ah~~r~g~~g~~d~tp~~FDN~Yy~~ll~~~~~gll~L~SD~aL~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~ 240 (251)
T PLN02879 161 GGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHL 240 (251)
T ss_pred ccccccccccccccCCCCCCCCccceeHHHHHHHHcCCcCCCccchhhHHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987789999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCC
Q 025646 241 KLSELGFAEA 250 (250)
Q Consensus 241 Km~~lgv~~~ 250 (250)
||+++|+.|.
T Consensus 241 KL~~lg~~~~ 250 (251)
T PLN02879 241 KLSELGFADK 250 (251)
T ss_pred HHHccCCCCC
Confidence 9999999873
No 2
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=2.6e-77 Score=526.62 Aligned_cols=249 Identities=83% Similarity=1.365 Sum_probs=241.8
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHhhhhhcCCchhhHHHhhhcccCccccCCCCCCCCCcccchhhhhccccCchHHHHHH
Q 025646 1 MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRL 80 (250)
Q Consensus 1 ~~~~cp~~~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~ 80 (250)
|++.||.+.+.|++++++++++|++++.++.++|.+|||+||||++||.....|||||||.+++|+++++|.||.+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~~~E~~~~~N~gl~~~~~~ 80 (250)
T PLN02364 1 MTKNYPTVSEDYKKAVEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRFDAEQAHGANSGIHIALRL 80 (250)
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHccccCcCcCCCCCCCCccccccccccCCCccCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHhHHHhCCCCchhhHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhh-cCCChhhhhhh
Q 025646 81 LEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQ-MGLSDKDIVAL 159 (250)
Q Consensus 81 i~~~k~~~~~VS~AD~ialaa~~av~~~GGP~~~~~~GR~D~~~~~~~~~lP~~~~~~~~l~~~F~~~-~Gls~~e~VaL 159 (250)
|+.||+++++|||||||+|||++||+++|||.|+|++||+|++++.+.++||.|+.++++|++.| +. +||+++|||||
T Consensus 81 i~~ik~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F-~~~~Gl~~~d~VaL 159 (250)
T PLN02364 81 LDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPPEGRLPDATKGCDHLRDVF-AKQMGLSDKDIVAL 159 (250)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccccCCCCCCCcCHHHHHHHH-HHhcCCCHHHheee
Confidence 99999999999999999999999999999999999999999999998889999999999999999 75 69999999999
Q ss_pred ccCccccccccCCCCCCCCCCCCCcccChHHHHHHhhccCCCcccccccccccCCCCcHHHHHHhhhChHHHHHHHHHHH
Q 025646 160 SGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAH 239 (250)
Q Consensus 160 ~GaHtiG~~~~~~~~~~g~~~~tp~~fDn~Yf~~ll~~~~~gll~l~sD~~L~~d~~t~~~v~~yA~~~~~F~~~F~~Am 239 (250)
+||||||++||.+++|.|+|+.||.+|||+||++|+.++++|+++|+||++|+.|++|+.+|+.||.|++.|+++|+.||
T Consensus 160 sGaHTiG~~hc~r~~~~g~~~~tp~~fDn~Yy~~ll~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am 239 (250)
T PLN02364 160 SGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAH 239 (250)
T ss_pred ecceeeccccCCCCCCCCCCCCCCCccchHHHHHHhcCCcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998778999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCC
Q 025646 240 LKLSELGFAEA 250 (250)
Q Consensus 240 ~Km~~lgv~~~ 250 (250)
+||+++|+.++
T Consensus 240 ~Km~~lg~~~~ 250 (250)
T PLN02364 240 MKLSELGFADA 250 (250)
T ss_pred HHHHccCCCCC
Confidence 99999999875
No 3
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=1.1e-75 Score=523.47 Aligned_cols=244 Identities=69% Similarity=1.160 Sum_probs=237.0
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhhcCCchhhHHHhhhcccCccccCCCCCCCCCcccchhhhhccccCchHHHHHHHHhH
Q 025646 5 YPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPF 84 (250)
Q Consensus 5 cp~~~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~i~~~ 84 (250)
.|.+...|-++|+.+|++|+++++++.++|.+|||+||||++||.+++.|||||||++.+|+++++|.||++++++|++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~~E~~~~~N~gL~~g~~vid~i 82 (289)
T PLN02608 3 APVVDAEYLKEIEKARRDLRALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNEEEYSHGANNGLKIAIDLCEPV 82 (289)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecccccCCccccchHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred HHhCCCCchhhHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhcCCChhhhhhhccCcc
Q 025646 85 KEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHT 164 (250)
Q Consensus 85 k~~~~~VS~AD~ialaa~~av~~~GGP~~~~~~GR~D~~~~~~~~~lP~~~~~~~~l~~~F~~~~Gls~~e~VaL~GaHt 164 (250)
|+++|+|||||||+|||++||+++|||.|+|++||+|+++++++++||.|+.+++++++.| +++||+++|||+|+||||
T Consensus 83 K~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~LP~p~~~~~~l~~~F-~~~Gl~~~D~VaLsGAHT 161 (289)
T PLN02608 83 KAKHPKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPEEGRLPDAKKGAKHLRDVF-YRMGLSDKDIVALSGGHT 161 (289)
T ss_pred HHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCccCCCcCCCCCHHHHHHHH-HHcCCCHHHHhhhccccc
Confidence 9999999999999999999999999999999999999999988889999999999999999 999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCcccChHHHHHHhhccCCCcccccccccccCCCCcHHHHHHhhhChHHHHHHHHHHHHHHHh
Q 025646 165 LGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSE 244 (250)
Q Consensus 165 iG~~~~~~~~~~g~~~~tp~~fDn~Yf~~ll~~~~~gll~l~sD~~L~~d~~t~~~v~~yA~~~~~F~~~F~~Am~Km~~ 244 (250)
||.+||.+.+|.|+|+.||.+|||+||++|+.++.+|+++|+||++|+.|++|+++|+.||.|++.|+++|+.||+||++
T Consensus 162 iG~ahc~r~g~~g~~~~Tp~~FDN~Yy~~ll~~~~~gll~L~SD~~L~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~ 241 (289)
T PLN02608 162 LGRAHPERSGFDGPWTKEPLKFDNSYFVELLKGESEGLLKLPTDKALLEDPEFRPYVELYAKDEDAFFRDYAESHKKLSE 241 (289)
T ss_pred cccccccCCCCCCCCCCCCCccChHHHHHHHcCCcCCccccccCHhhhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHc
Confidence 99999998888899999999999999999999866799888999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 025646 245 LGFAE 249 (250)
Q Consensus 245 lgv~~ 249 (250)
+||.+
T Consensus 242 lgvlt 246 (289)
T PLN02608 242 LGFTP 246 (289)
T ss_pred CCCCC
Confidence 99986
No 4
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1.8e-71 Score=491.13 Aligned_cols=243 Identities=63% Similarity=1.110 Sum_probs=220.1
Q ss_pred CChhHHH-HHHHHHHHHHHhhhhhcCCchhhHHHhhhcccCccccCCCCCCCCCcccchhhhhccccCchHHHHHHHHhH
Q 025646 6 PTVSEDY-KKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPF 84 (250)
Q Consensus 6 p~~~~~v-~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~i~~~ 84 (250)
|.|+..| ...++.+|+.|+++++++.++|.+|||+||||++||++++.|||||++.+++|+++++|.+|.+++++|++|
T Consensus 2 ~~~~~~~~~~~~~~V~~~v~~~~~~~~~~~~llRl~FHDc~~~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~i 81 (253)
T cd00691 2 PVVSAAYAAKDLEAARNDIAKLIDDKNCAPILVRLAWHDSGTYDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPI 81 (253)
T ss_pred CcccccccHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhccccccCCCCCCccccchhhcCCccccchHHHHHHHHHH
Confidence 3344333 233444455555555599999999999999999999999999999999888999999999998899999999
Q ss_pred HHhCCCCchhhHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCC---CCCCCCCCCCChHHHHHHHHhhcCCChhhhhhhcc
Q 025646 85 KEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP---QEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSG 161 (250)
Q Consensus 85 k~~~~~VS~AD~ialaa~~av~~~GGP~~~~~~GR~D~~~~~---~~~~lP~~~~~~~~l~~~F~~~~Gls~~e~VaL~G 161 (250)
|+++|+|||||||+|||++||+.+|||.|+|++||+|+.++. +.++||.|+.+++++++.| +++||+.+|||+|+|
T Consensus 82 K~~~~~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F-~~~Gls~~d~VaLsG 160 (253)
T cd00691 82 KKKYPDISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVF-YRMGFNDQEIVALSG 160 (253)
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHH-HhcCCCHHHHHHhcc
Confidence 999999999999999999999999999999999999999986 5778999999999999999 999999999999999
Q ss_pred CccccccccCCCCCCCCCCCCCcccChHHHHHHhhccC----CCcccccccccccCCCCcHHHHHHhhhChHHHHHHHHH
Q 025646 162 GHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEK----DGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAE 237 (250)
Q Consensus 162 aHtiG~~~~~~~~~~g~~~~tp~~fDn~Yf~~ll~~~~----~gll~l~sD~~L~~d~~t~~~v~~yA~~~~~F~~~F~~ 237 (250)
|||||.+||.++++.|+|+.||.+|||+||++|+.+.+ ++++.|+||++|+.|++|+++|+.||.|+++|+++|+.
T Consensus 161 aHTiG~a~c~~~~~~g~~~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L~sD~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~ 240 (253)
T cd00691 161 AHTLGRCHKERSGYDGPWTKNPLKFDNSYFKELLEEDWKLPTPGLLMLPTDKALLEDPKFRPYVELYAKDQDAFFKDYAE 240 (253)
T ss_pred cceeecccccCCCCCCCCCCCCCcccHHHHHHHhcCCCccCcCcceechhhHHHHcCccHHHHHHHHhhCHHHHHHHHHH
Confidence 99999999988888889999999999999999999843 34556779999999999999999999999999999999
Q ss_pred HHHHHHhCCCCC
Q 025646 238 AHLKLSELGFAE 249 (250)
Q Consensus 238 Am~Km~~lgv~~ 249 (250)
||+||+++||++
T Consensus 241 Am~Km~~l~v~~ 252 (253)
T cd00691 241 AHKKLSELGVPF 252 (253)
T ss_pred HHHHHHhcCCCC
Confidence 999999999986
No 5
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=9.8e-69 Score=484.93 Aligned_cols=229 Identities=28% Similarity=0.435 Sum_probs=208.4
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhhhhhcCCchhhHHHhhhcccCccccCCCCCCCCCcccch---hhhhccccCchHHHH
Q 025646 2 TKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLA---AEQAHSANNGLDIAV 78 (250)
Q Consensus 2 ~~~cp~~~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~~---~E~~~~~N~gl~~~~ 78 (250)
.++||++|+||+++|+++ +.+++.++|++|||+|||||+ +||||||++. .|++.++|.+|. +|
T Consensus 31 ~~sCP~aE~iV~~~v~~~------~~~d~~~aa~llRL~FHDCfv-------~GCDaSvLl~~~~~Ek~a~~N~~l~-Gf 96 (324)
T PLN03030 31 STTCPQAESIVRKTVQSH------FQSNPAIAPGLLRMHFHDCFV-------RGCDASILIDGSNTEKTALPNLLLR-GY 96 (324)
T ss_pred hCcCCCHHHHHHHHHHHH------HhhCcccchhhhhhhhhhhee-------cCCceEEeeCCCcccccCCCCcCcc-hH
Confidence 579999999999999999 999999999999999999997 9999999873 699999999984 89
Q ss_pred HHHHhHHHh----CC-CCchhhHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCC--CCCCCCCCCCChHHHHHHHHhhcCC
Q 025646 79 RLLEPFKEQ----FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP--QEGRLPDAKQGNDHLRQVFGAQMGL 151 (250)
Q Consensus 79 ~~i~~~k~~----~~-~VS~AD~ialaa~~av~~~GGP~~~~~~GR~D~~~~~--~~~~lP~~~~~~~~l~~~F~~~~Gl 151 (250)
++|+.||.+ || +|||||||++|||+||.++|||.|+|++||+|++++. ...+||.|+.+++++++.| +++||
T Consensus 97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F-~~~Gl 175 (324)
T PLN03030 97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKF-AAKGL 175 (324)
T ss_pred HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHH-HHcCC
Confidence 999999964 88 7999999999999999999999999999999999873 3458999999999999999 99999
Q ss_pred ChhhhhhhccCccccccccCC-----CCCCC---------------------C-----------CCCCCcccChHHHHHH
Q 025646 152 SDKDIVALSGGHTLGRCHKER-----SGFEG---------------------P-----------WTRNPLIFDNSYFTEL 194 (250)
Q Consensus 152 s~~e~VaL~GaHtiG~~~~~~-----~~~~g---------------------~-----------~~~tp~~fDn~Yf~~l 194 (250)
+.+|||+|+||||||++||.. ++|.+ | +..||.+|||+||++|
T Consensus 176 ~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nl 255 (324)
T PLN03030 176 NTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNL 255 (324)
T ss_pred CHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHH
Confidence 999999999999999999962 22211 0 1258999999999999
Q ss_pred hhccCCCcccccccccccCCCCcHHHHHHhhhCh----HHHHHHHHHHHHHHHhCCCCC
Q 025646 195 LTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADE----DAFFADYAEAHLKLSELGFAE 249 (250)
Q Consensus 195 l~~~~~gll~l~sD~~L~~d~~t~~~v~~yA~~~----~~F~~~F~~Am~Km~~lgv~~ 249 (250)
+.+ +|+|. ||++|+.|++|+++|+.||.|+ +.|+++|+.||+||+++||.|
T Consensus 256 l~~--rGlL~--SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlT 310 (324)
T PLN03030 256 KNG--RGILE--SDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKT 310 (324)
T ss_pred Hhc--CCCcC--CchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCC
Confidence 998 79876 9999999999999999999875 599999999999999999986
No 6
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=8.9e-68 Score=477.37 Aligned_cols=229 Identities=36% Similarity=0.581 Sum_probs=209.6
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhhhhhcCCchhhHHHhhhcccCccccCCCCCCCCCcccc------hhhhhccccCchH
Q 025646 2 TKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRL------AAEQAHSANNGLD 75 (250)
Q Consensus 2 ~~~cp~~~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~------~~E~~~~~N~gl~ 75 (250)
.++||+||++|+++|+++ +..++.++|++|||+||||++ +||||||++ .+|+++++|.+|
T Consensus 8 ~~sCP~~e~iV~~~v~~~------~~~~~~~a~~~lRl~FHDc~v-------~GcDaSill~~~~~~~~E~~~~~N~~l- 73 (298)
T cd00693 8 SKSCPNAESIVRSVVRAA------VKADPRLAAALLRLHFHDCFV-------RGCDASVLLDSTANNTSEKDAPPNLSL- 73 (298)
T ss_pred cCCCCChHHHHHHHHHHH------HHhCCCcCchhhhhhhHhhhc-------cCcceeEEecCCCCCchhccCCCCCCc-
Confidence 579999999999999999 999999999999999999997 899999986 369999999999
Q ss_pred HHHHHHHhHHHh----CC-CCchhhHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCCC--CCCCCCCCCChHHHHHHHHhh
Q 025646 76 IAVRLLEPFKEQ----FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ--EGRLPDAKQGNDHLRQVFGAQ 148 (250)
Q Consensus 76 ~~~~~i~~~k~~----~~-~VS~AD~ialaa~~av~~~GGP~~~~~~GR~D~~~~~~--~~~lP~~~~~~~~l~~~F~~~ 148 (250)
+++++|+.||.. || +|||||||+|||++||+.+|||.|+|++||+|+..+.+ .+.||.|+.+++++++.| ++
T Consensus 74 ~g~~~i~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F-~~ 152 (298)
T cd00693 74 RGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDVGNLPSPFFSVSQLISLF-AS 152 (298)
T ss_pred chhHHHHHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccccCCCCcccCHHHHHHHH-HH
Confidence 489999999964 78 89999999999999999999999999999999987643 368999999999999999 99
Q ss_pred cCCChhhhhhhccCccccccccC----C-CCCCC--------------------CC----------C-CCCcccChHHHH
Q 025646 149 MGLSDKDIVALSGGHTLGRCHKE----R-SGFEG--------------------PW----------T-RNPLIFDNSYFT 192 (250)
Q Consensus 149 ~Gls~~e~VaL~GaHtiG~~~~~----~-~~~~g--------------------~~----------~-~tp~~fDn~Yf~ 192 (250)
+||+++|||+|+||||||++||. | ++|.| |+ + .||.+|||+||+
T Consensus 153 ~G~~~~d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~ 232 (298)
T cd00693 153 KGLTVTDLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYK 232 (298)
T ss_pred cCCCHHHheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHH
Confidence 99999999999999999999995 2 34422 22 2 789999999999
Q ss_pred HHhhccCCCcccccccccccCCCCcHHHHHHhhhChHHHHHHHHHHHHHHHhCCCCC
Q 025646 193 ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 249 (250)
Q Consensus 193 ~ll~~~~~gll~l~sD~~L~~d~~t~~~v~~yA~~~~~F~~~F~~Am~Km~~lgv~~ 249 (250)
+|+.+ +|+|. ||++|+.|++|+++|+.||.||+.|+++|+.||.||+++||.+
T Consensus 233 ~l~~~--~glL~--SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~t 285 (298)
T cd00693 233 NLLAG--RGLLT--SDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLT 285 (298)
T ss_pred HHHhc--ccCcc--CCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCcc
Confidence 99998 78754 9999999999999999999999999999999999999999986
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.1e-62 Score=446.95 Aligned_cols=234 Identities=31% Similarity=0.470 Sum_probs=203.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhhcCC---chhhHHHhhhcccCcccc-----CCCCCCCCCcccch--hhhhccccCchHHH
Q 025646 8 VSEDYKKAVEKCKRKLRGFIAEKN---CAPLMLRIAWHSAGTYDV-----KTKTGGPFGTMRLA--AEQAHSANNGLDIA 77 (250)
Q Consensus 8 ~~~~v~~~v~~~~~~~~~~~~~~~---~a~~~lRl~FHDc~~~d~-----s~~~gG~dgsi~~~--~E~~~~~N~gl~~~ 77 (250)
+|..|++.++.. +..+.. .|+.+|||+||||++||. ..+.|||||||++. .|+++++|.||+.+
T Consensus 16 ~~~~v~~dl~~~------~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~~E~~~~~N~gL~~v 89 (328)
T cd00692 16 VWFDILDDIQGN------LFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDDIETAFHANIGLDEI 89 (328)
T ss_pred chHHHHHHHHHH------HhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCcccccCCCCCCHHHH
Confidence 344444444444 443444 567799999999999994 56789999999874 59999999999877
Q ss_pred HHHHHhHHHhCCCCchhhHHHhhhhhhhhh-cCCCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhcCCChhhh
Q 025646 78 VRLLEPFKEQFPTISYADLYQLAGVVGVEV-TGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDI 156 (250)
Q Consensus 78 ~~~i~~~k~~~~~VS~AD~ialaa~~av~~-~GGP~~~~~~GR~D~~~~~~~~~lP~~~~~~~~l~~~F~~~~Gls~~e~ 156 (250)
++.|..++++++ |||||||+|||++||+. .|||.|+|++||+|++++.+.++||.|+.++++|++.| +++||+.+||
T Consensus 90 vd~lk~~~e~~c-VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~~g~LP~p~~sv~~l~~~F-~~~Gf~~~E~ 167 (328)
T cd00692 90 VEALRPFHQKHN-VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAPDGLVPEPFDSVDKILARF-ADAGFSPDEL 167 (328)
T ss_pred HHHHHHHHHhcC-cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCcccCCCCCCCCHHHHHHHH-HHcCCCHHHH
Confidence 777777777765 99999999999999995 69999999999999999999999999999999999999 9999999999
Q ss_pred hhhccCccccccccCCCCCCC-CCCCCCcccChHHHHHHhh-ccC---------------CCcccccccccccCCCCcHH
Q 025646 157 VALSGGHTLGRCHKERSGFEG-PWTRNPLIFDNSYFTELLT-GEK---------------DGLLQLPSDKALLDDPVFRP 219 (250)
Q Consensus 157 VaL~GaHtiG~~~~~~~~~~g-~~~~tp~~fDn~Yf~~ll~-~~~---------------~gll~l~sD~~L~~d~~t~~ 219 (250)
|+|+||||||++|...+.+.| +|+.||.+|||+||+|++. +.. +|+++|+||++|+.|++|+.
T Consensus 168 VaLsGAHTiG~a~~~Dps~~g~p~D~TP~~FDn~Yf~~ll~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~ 247 (328)
T cd00692 168 VALLAAHSVAAQDFVDPSIAGTPFDSTPGVFDTQFFIETLLKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTAC 247 (328)
T ss_pred hhhcccccccccCCCCCCCCCCCCCCCcchhcHHHHHHHHHcCCCCCCccccccccccCccccccccchHHHhcCCcHHH
Confidence 999999999999965555555 8999999999999999874 321 25677899999999999999
Q ss_pred HHHHhhhChHHHHHHHHHHHHHHHhCCCCC
Q 025646 220 LVEKYAADEDAFFADYAEAHLKLSELGFAE 249 (250)
Q Consensus 220 ~v~~yA~~~~~F~~~F~~Am~Km~~lgv~~ 249 (250)
+|+.||+||++|+++|+.||.||+++||+.
T Consensus 248 ~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~~ 277 (328)
T cd00692 248 EWQSFVNNQAKMNAAFAAAMLKLSLLGQDN 277 (328)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHcCCCCc
Confidence 999999999999999999999999999985
No 8
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=1.3e-59 Score=433.36 Aligned_cols=234 Identities=38% Similarity=0.648 Sum_probs=212.8
Q ss_pred HHHHHHHHHhhhhhcC---------CchhhHHHhhhcccCccccCCCCCCCC-CcccchhhhhccccCchHHHHHHHHhH
Q 025646 15 AVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPF 84 (250)
Q Consensus 15 ~v~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~s~~~gG~d-gsi~~~~E~~~~~N~gl~~~~~~i~~~ 84 (250)
.++.+|++|++++++. .++|.+|||+||++++||.+++.||++ |+|++++|.+++.|.||..++.+|++|
T Consensus 43 d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~pe~~~~~N~gL~~a~~~L~pi 122 (409)
T cd00649 43 DLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFAPLNSWPDNVNLDKARRLLWPI 122 (409)
T ss_pred cHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccccccCcHhhhhHHHHHHHHHHH
Confidence 3577899999999864 699999999999999999999999998 799999999999999999999999999
Q ss_pred HHhCC-CCchhhHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCC-------------------------------------
Q 025646 85 KEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP------------------------------------- 126 (250)
Q Consensus 85 k~~~~-~VS~AD~ialaa~~av~~~GGP~~~~~~GR~D~~~~~------------------------------------- 126 (250)
|++++ .||+||+|+||+++||+.+|||.|+|.+||.|+..+.
T Consensus 123 k~k~~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~a~~mgliyv 202 (409)
T cd00649 123 KQKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLAAVQMGLIYV 202 (409)
T ss_pred HHHcCCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchhhhhcccccc
Confidence 99998 7999999999999999999999999999999997542
Q ss_pred -CCC--CCCCCCCChHHHHHHHHhhcCCChhhhhhh-ccCccccccccCC------------------------------
Q 025646 127 -QEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKER------------------------------ 172 (250)
Q Consensus 127 -~~~--~lP~~~~~~~~l~~~F~~~~Gls~~e~VaL-~GaHtiG~~~~~~------------------------------ 172 (250)
|++ .||.|..++.+|++.| .+|||+.+||||| +||||||++||..
T Consensus 203 ~Pegp~gLPdP~~sa~~LR~~F-~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg~dP~~~~~~~~gLgw~~~Cp~g~g 281 (409)
T cd00649 203 NPEGPDGNPDPLAAAKDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGPASHVGPEPEAAPIEQQGLGWKNSYGTGKG 281 (409)
T ss_pred CCCCCCCCCCCccCHHHHHHHH-HHcCCCHHHHeeeccCCcceeecCcccccccCCCCCCcCHHHHHhhcccccCCCCCC
Confidence 233 6899999999999999 9999999999999 5999999999942
Q ss_pred -----CCCCCCCCCCCcccChHHHHHHhhccC--------------------------------CCcccccccccccCCC
Q 025646 173 -----SGFEGPWTRNPLIFDNSYFTELLTGEK--------------------------------DGLLQLPSDKALLDDP 215 (250)
Q Consensus 173 -----~~~~g~~~~tp~~fDn~Yf~~ll~~~~--------------------------------~gll~l~sD~~L~~d~ 215 (250)
++++|+|+.+|.+|||+||++|+.+++ .++.+|+||++|+.|+
T Consensus 282 ~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~~~gmL~SD~aL~~Dp 361 (409)
T cd00649 282 KDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKHAPMMLTTDLALRFDP 361 (409)
T ss_pred CCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCccccccccCcccchhhHhhhcCc
Confidence 357789999999999999999998321 2567788999999999
Q ss_pred CcHHHHHHhhhChHHHHHHHHHHHHHH--HhCCCCC
Q 025646 216 VFRPLVEKYAADEDAFFADYAEAHLKL--SELGFAE 249 (250)
Q Consensus 216 ~t~~~v~~yA~~~~~F~~~F~~Am~Km--~~lgv~~ 249 (250)
+++++|++||.|++.|+++|++||.|| +.+|+++
T Consensus 362 ~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~ 397 (409)
T cd00649 362 EYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKS 397 (409)
T ss_pred cHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchh
Confidence 999999999999999999999999999 5777654
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=1.6e-58 Score=409.84 Aligned_cols=226 Identities=46% Similarity=0.744 Sum_probs=204.5
Q ss_pred HHHHHHHHHHHHhhhhhcCCchhhHHHhhhcccCccccCC-CCCCCCCcccchhhhhccccCchHHHHHHHHhHHHhCC-
Q 025646 12 YKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFP- 89 (250)
Q Consensus 12 v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~-~~gG~dgsi~~~~E~~~~~N~gl~~~~~~i~~~k~~~~- 89 (250)
|+..|++. +.+++.+++.+|||+||||++|+... ..|||||||++.+|+++|+|.+|.+++++|++||++++
T Consensus 3 v~~~l~~~------~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~e~~~~~N~~l~~~~~~l~~ik~~~~~ 76 (255)
T cd00314 3 IKAILEDL------ITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEPELDRPENGGLDKALRALEPIKSAYDG 76 (255)
T ss_pred HHHHHHHH------HHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccccccCcccccHHHHHHHHHHHHHHcCC
Confidence 45555554 55688999999999999999999887 78999999999999999999999889999999999985
Q ss_pred --CCchhhHHHhhhhhhhhhc--CCCCCCCCCCCCCCC-----CCCCCCCCCCCCCChHHHHHHHHhhcCCChhhhhhhc
Q 025646 90 --TISYADLYQLAGVVGVEVT--GGPDIPFHPGRDDKA-----EPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS 160 (250)
Q Consensus 90 --~VS~AD~ialaa~~av~~~--GGP~~~~~~GR~D~~-----~~~~~~~lP~~~~~~~~l~~~F~~~~Gls~~e~VaL~ 160 (250)
+|||||||++|+++||+.+ |||.|+|++||+|++ .+.|.+++|.+..+++++++.| .++||+++|||||+
T Consensus 77 ~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F-~~~Gl~~~e~VAL~ 155 (255)
T cd00314 77 GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKF-KRMGLSPSELVALS 155 (255)
T ss_pred CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHH-HHcCCCHHHHHhhc
Confidence 7999999999999999999 999999999999999 4567788999999999999999 89999999999999
Q ss_pred -cCccc-cccccCCCCCC--CCCCCCCcccChHHHHHHhhccC------------CCcccccccccccCCCCcHHHHHHh
Q 025646 161 -GGHTL-GRCHKERSGFE--GPWTRNPLIFDNSYFTELLTGEK------------DGLLQLPSDKALLDDPVFRPLVEKY 224 (250)
Q Consensus 161 -GaHti-G~~~~~~~~~~--g~~~~tp~~fDn~Yf~~ll~~~~------------~gll~l~sD~~L~~d~~t~~~v~~y 224 (250)
||||| |++||...+.. ++|+.||.+|||+||++|+.+.+ +++..|+||++|+.|++|+.+|+.|
T Consensus 156 ~GaHti~G~~~~~~~~~~~~~~~~~tp~~fDN~yy~~l~~~~~~~~~~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~y 235 (255)
T cd00314 156 AGAHTLGGKNHGDLLNYEGSGLWTSTPFTFDNAYFKNLLDMNWEWRVGSPDPDGVKGPGLLPSDYALLSDSETRALVERY 235 (255)
T ss_pred cCCeeccCcccCCCCCcccCCCCCCCCCccchHHHHHHhcCCcccccCCccCCCcccCCCchhhHHHhcCHhHHHHHHHH
Confidence 99999 99999765544 67889999999999999999753 2334567999999999999999999
Q ss_pred hhChHHHHHHHHHHHHHHHh
Q 025646 225 AADEDAFFADYAEAHLKLSE 244 (250)
Q Consensus 225 A~~~~~F~~~F~~Am~Km~~ 244 (250)
|.|++.|+++|++||.||++
T Consensus 236 a~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 236 ASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred HhCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999974
No 10
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=3.1e-58 Score=402.38 Aligned_cols=198 Identities=43% Similarity=0.738 Sum_probs=170.8
Q ss_pred HHHHHHHHHHHHhhhhhcCCchhhHHHhhhcccCccccCCCCCCCCCcccc-hhhhhccccCchHHHHHHHHhHHHh---
Q 025646 12 YKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRL-AAEQAHSANNGLDIAVRLLEPFKEQ--- 87 (250)
Q Consensus 12 v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~-~~E~~~~~N~gl~~~~~~i~~~k~~--- 87 (250)
||++|+++ +..++.++|++|||+||||++| |||||||++ .+|+++++|.||.+++++|+.||++
T Consensus 1 Vr~~v~~~------~~~~~~~~~~~lRl~FHDc~~~------~GcDgSil~~~~e~~~~~N~gl~~~~~~i~~ik~~~~~ 68 (230)
T PF00141_consen 1 VRSDVRAA------FKKDPTLAPGLLRLAFHDCFVY------GGCDGSILLFSAEKDAPPNRGLRDGFDVIDPIKAKLEA 68 (230)
T ss_dssp HHHHHHHH------HHHHTTSHHHHHHHHHHHHTTH------TSSSSGGGGSTTGGGSGGGTTHHHHHHHHHHHHHHHCH
T ss_pred CHHHHHHH------HHHCcCccHHHHHHHccccccc------cccccceeccccccccccccCcceeeechhhHHhhhcc
Confidence 56666666 6778999999999999999987 999999976 7899999999998899999999975
Q ss_pred -CC-CCchhhHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCCCCC--CCCCCCCChHHHHHHHHhhcCCChhhhhhhccCc
Q 025646 88 -FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGH 163 (250)
Q Consensus 88 -~~-~VS~AD~ialaa~~av~~~GGP~~~~~~GR~D~~~~~~~~--~lP~~~~~~~~l~~~F~~~~Gls~~e~VaL~GaH 163 (250)
|| +|||||||++||++||+.+|||.|+|++||+|+..+.+.+ +||.|+.++++|++.| +++|||++|||||+|||
T Consensus 69 ~cp~~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F-~~~Gls~~e~VaLsGaH 147 (230)
T PF00141_consen 69 ACPGVVSCADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGASNLPSPTDSVDQLLAFF-ARKGLSAEEMVALSGAH 147 (230)
T ss_dssp HSTTTS-HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHHHHSSTTTSHHHHHHHHH-HHTT--HHHHHHHHGGG
T ss_pred cccCCCCHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccchhhhhh-hccccchhhhcceeccc
Confidence 77 6999999999999999999999999999999999997643 5999999999999999 99999999999999999
Q ss_pred cccccccCCCC---C------C--------------C-CCCCCCcccChHHHHHHhhccCCCcccccccccccCCCCcHH
Q 025646 164 TLGRCHKERSG---F------E--------------G-PWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRP 219 (250)
Q Consensus 164 tiG~~~~~~~~---~------~--------------g-~~~~tp~~fDn~Yf~~ll~~~~~gll~l~sD~~L~~d~~t~~ 219 (250)
|||.+||.... + + . +++ ||.+|||+||++|+.+ +|++. ||++|++|++|++
T Consensus 148 TiG~~~c~~f~rl~~~~dp~~d~~~~~~~C~~~~~~~~~~d-tp~~fDN~Yy~~ll~~--~gll~--SD~~L~~d~~t~~ 222 (230)
T PF00141_consen 148 TIGRAHCSSFSRLYFPPDPTMDPGYAGQNCNSGGDNGVPLD-TPTVFDNSYYKNLLNG--RGLLP--SDQALLNDPETRP 222 (230)
T ss_dssp GSTEESGGCTGGTSCSSGTTSTHHHHHHSSSTSGCTCEESS-STTS-SSHHHHHHHHT--EEEEH--HHHHHHHSTTHHH
T ss_pred ccccceeccccccccccccccccccceeccCCCcccccccc-CCCcchhHHHHHHhcC--CCcCH--HHHHHhcCHHHHH
Confidence 99999996211 0 0 0 234 8999999999999998 67755 9999999999999
Q ss_pred HHHHhhhC
Q 025646 220 LVEKYAAD 227 (250)
Q Consensus 220 ~v~~yA~~ 227 (250)
+|++||+|
T Consensus 223 ~V~~yA~d 230 (230)
T PF00141_consen 223 IVERYAQD 230 (230)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhcC
Confidence 99999986
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=4.6e-56 Score=432.97 Aligned_cols=234 Identities=38% Similarity=0.646 Sum_probs=209.6
Q ss_pred HHHHHHHH-----HHHHHhhhhhcC---------CchhhHHHhhhcccCccccCCCCCCCC-CcccchhhhhccccCchH
Q 025646 11 DYKKAVEK-----CKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLD 75 (250)
Q Consensus 11 ~v~~~v~~-----~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~s~~~gG~d-gsi~~~~E~~~~~N~gl~ 75 (250)
+|++++++ +|++|++++++. .++|.+|||+||++++||.+++.||++ |+|++.+|++|+.|.+|.
T Consensus 44 ~y~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~P~~sw~~N~~Ld 123 (716)
T TIGR00198 44 DYAEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFAPLNSWPDNVNLD 123 (716)
T ss_pred cHHHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecccccCchhhhhHH
Confidence 45555554 899999999875 699999999999999999999999996 799999999999999999
Q ss_pred HHHHHHHhHHHhCC-CCchhhHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCC----------------------------
Q 025646 76 IAVRLLEPFKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP---------------------------- 126 (250)
Q Consensus 76 ~~~~~i~~~k~~~~-~VS~AD~ialaa~~av~~~GGP~~~~~~GR~D~~~~~---------------------------- 126 (250)
+++.+|++||++|| .|||||||+|||++||+.+|||.|+|.+||+|+..+.
T Consensus 124 ka~~lL~pIk~kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~ 203 (716)
T TIGR00198 124 KARRLLWPIKKKYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAA 203 (716)
T ss_pred HHHHHHHHHHHHCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchh
Confidence 99999999999998 7999999999999999999999999999999995431
Q ss_pred ---------CCC--CCCCCCCChHHHHHHHHhhcCCChhhhhhhc-cCccccccccC-----------------------
Q 025646 127 ---------QEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLGRCHKE----------------------- 171 (250)
Q Consensus 127 ---------~~~--~lP~~~~~~~~l~~~F~~~~Gls~~e~VaL~-GaHtiG~~~~~----------------------- 171 (250)
+++ .+|.|..++++|++.| .+||||.+|||||+ ||||||++||.
T Consensus 204 ~~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F-~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rlg~dP~~~~~~~~gLg~~ 282 (716)
T TIGR00198 204 TEMGLIYVNPEGPDGHPDPLCTAQDIRTTF-ARMGMNDEETVALIAGGHTVGKCHGAGPAELIGPDPEGAPIEEQGLGWH 282 (716)
T ss_pred hhccccccCcccccCCCCCCCCHHHHHHHH-HHcCCChHHHeeeecCceeccccCCCcccccCCCCCCcCHHHHHHhccc
Confidence 122 6899999999999999 99999999999995 99999999994
Q ss_pred ------------CCCCCCCCCCCCcccChHHHHHHhhccC------------------------------CCcccccccc
Q 025646 172 ------------RSGFEGPWTRNPLIFDNSYFTELLTGEK------------------------------DGLLQLPSDK 209 (250)
Q Consensus 172 ------------~~~~~g~~~~tp~~fDn~Yf~~ll~~~~------------------------------~gll~l~sD~ 209 (250)
.++++|+|+.||.+|||+||++|+.+++ ....+|.||+
T Consensus 283 c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~mL~SDl 362 (716)
T TIGR00198 283 NQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPIMLDADL 362 (716)
T ss_pred CCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccccccCccchhH
Confidence 1345688999999999999999997521 1245678999
Q ss_pred cccCCCCcHHHHHHhhhChHHHHHHHHHHHHHHHhC
Q 025646 210 ALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSEL 245 (250)
Q Consensus 210 ~L~~d~~t~~~v~~yA~~~~~F~~~F~~Am~Km~~l 245 (250)
+|..|++++++|++||.|++.|+++|+.||.||++.
T Consensus 363 aL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~ 398 (716)
T TIGR00198 363 ALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHR 398 (716)
T ss_pred HhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHccc
Confidence 999999999999999999999999999999999953
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=5.4e-54 Score=416.50 Aligned_cols=232 Identities=38% Similarity=0.641 Sum_probs=209.0
Q ss_pred HHHHHHHHHhhhhhcC---------CchhhHHHhhhcccCccccCCCCCCCC-CcccchhhhhccccCchHHHHHHHHhH
Q 025646 15 AVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPF 84 (250)
Q Consensus 15 ~v~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~s~~~gG~d-gsi~~~~E~~~~~N~gl~~~~~~i~~~ 84 (250)
.++.+|++|++++++. .+.|.+|||+||++++||.+++.||++ |+|++.+|.+++.|.||.+++.+|++|
T Consensus 55 d~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~pe~~w~~N~gL~ka~~~L~pi 134 (726)
T PRK15061 55 DLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNVNLDKARRLLWPI 134 (726)
T ss_pred hHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCcccccchhhhhHHHHHHHHHHH
Confidence 4566899999999875 689999999999999999999999997 799999999999999999999999999
Q ss_pred HHhCC-CCchhhHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCCC------------------------------------
Q 025646 85 KEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ------------------------------------ 127 (250)
Q Consensus 85 k~~~~-~VS~AD~ialaa~~av~~~GGP~~~~~~GR~D~~~~~~------------------------------------ 127 (250)
|++|+ .||+||+|+||+++||+.+|||.|+|.+||.|...+..
T Consensus 135 k~ky~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl~a~~mgliy 214 (726)
T PRK15061 135 KQKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPLAAVQMGLIY 214 (726)
T ss_pred HHHhCCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccchhhhhcccee
Confidence 99997 79999999999999999999999999999999875421
Q ss_pred ---C--CCCCCCCCChHHHHHHHHhhcCCChhhhhhhc-cCccccccccCC-----------------------------
Q 025646 128 ---E--GRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLGRCHKER----------------------------- 172 (250)
Q Consensus 128 ---~--~~lP~~~~~~~~l~~~F~~~~Gls~~e~VaL~-GaHtiG~~~~~~----------------------------- 172 (250)
+ .-+|.|..++.+|++.| .+|||+.+|||||+ ||||||++||..
T Consensus 215 vnpegp~glPdP~~sa~~lR~tF-~RMGmnDeEtVALiaGgHT~GkaHca~~~~rlgpdP~~a~~~~qgLgw~~~c~~g~ 293 (726)
T PRK15061 215 VNPEGPNGNPDPLAAARDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGDASHVGPEPEAAPIEEQGLGWKNSYGSGK 293 (726)
T ss_pred cCCCCCCCCCCcccCHHHHHHHH-HHcCCCHHHheeeccCCceeeeCCCcCcccccCCCCCcCHHHHHhccccccCCCCC
Confidence 1 12789999999999999 99999999999995 999999999941
Q ss_pred ------CCCCCCCCCCCcccChHHHHHHhhccC--------------------------------CCcccccccccccCC
Q 025646 173 ------SGFEGPWTRNPLIFDNSYFTELLTGEK--------------------------------DGLLQLPSDKALLDD 214 (250)
Q Consensus 173 ------~~~~g~~~~tp~~fDn~Yf~~ll~~~~--------------------------------~gll~l~sD~~L~~d 214 (250)
++++|+|+.||.+|||+||++|+.+++ .++.+|.||++|..|
T Consensus 294 g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~~~~~MLtSD~AL~~D 373 (726)
T PRK15061 294 GADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKKHAPTMLTTDLALRFD 373 (726)
T ss_pred CCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCcccccccccCcccccccHHhhcC
Confidence 356788999999999999999998631 136778899999999
Q ss_pred CCcHHHHHHhhhChHHHHHHHHHHHHHHHh--CCC
Q 025646 215 PVFRPLVEKYAADEDAFFADYAEAHLKLSE--LGF 247 (250)
Q Consensus 215 ~~t~~~v~~yA~~~~~F~~~F~~Am~Km~~--lgv 247 (250)
++++++|++||.|++.|+++|+.||.||+. +|.
T Consensus 374 P~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp 408 (726)
T PRK15061 374 PEYEKISRRFLENPEEFADAFARAWFKLTHRDMGP 408 (726)
T ss_pred CcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCc
Confidence 999999999999999999999999999955 553
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=9.5e-53 Score=369.82 Aligned_cols=209 Identities=29% Similarity=0.442 Sum_probs=182.0
Q ss_pred hcCCchhhHHHhhhcccCccccCCCCCCCCCcccchhhhhccccCchH--HHHHHHHhHHHhCCCCchhhHHHhhhhhhh
Q 025646 28 AEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLD--IAVRLLEPFKEQFPTISYADLYQLAGVVGV 105 (250)
Q Consensus 28 ~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgsi~~~~E~~~~~N~gl~--~~~~~i~~~k~~~~~VS~AD~ialaa~~av 105 (250)
.++.+++.+|||+||||++||...+.|||||||++ |..+++|.|+. ..+..++.++ .++|||||||+|||++||
T Consensus 37 ~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIll--e~~~~En~G~~~n~~l~~~~~i~--~~~VScADiialAa~~AV 112 (264)
T cd08201 37 PGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQY--ELDRPENIGSGFNTTLNFFVNFY--SPRSSMADLIAMGVVTSV 112 (264)
T ss_pred CCccHHHHHHHHHHHhhcCcccCCCCCCCCcceee--cCCChhhccCchhhccccceeec--cCccCHHHHHHHHHHHHH
Confidence 45578999999999999999999999999999998 56788998875 2233344442 248999999999999999
Q ss_pred hhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhcCCChhhhhhhcc-CccccccccCCC------CCC--
Q 025646 106 EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSG-GHTLGRCHKERS------GFE-- 176 (250)
Q Consensus 106 ~~~GGP~~~~~~GR~D~~~~~~~~~lP~~~~~~~~l~~~F~~~~Gls~~e~VaL~G-aHtiG~~~~~~~------~~~-- 176 (250)
+.+|||.|+|++||+|++++.+.+ ||.|+.++++|++.| +++||+.+|||+|+| |||||++||... ++.
T Consensus 113 ~~~GGP~i~v~~GR~Da~~s~~~g-lP~P~~~v~~l~~~F-a~~Gfs~~DmVaLsggaHTiG~ahc~~f~~~~~~g~~~~ 190 (264)
T cd08201 113 ASCGGPVVPFRAGRIDATEAGQAG-VPEPQTDLGTTTESF-RRQGFSTSEMIALVACGHTLGGVHSEDFPEIVPPGSVPD 190 (264)
T ss_pred HHcCCCeecccccCCCcccccccc-CCCCccCHHHHHHHH-HHcCCChHHHheeecCCeeeeecccccchhhcCCccccC
Confidence 999999999999999999998876 999999999999999 999999999999995 999999999764 443
Q ss_pred C--CCCCCCcccChHHHHHHhhccCCCcccc------cccccccCCCCcHHHHHHhhhChHHHHHHHHHHHHHHHh
Q 025646 177 G--PWTRNPLIFDNSYFTELLTGEKDGLLQL------PSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSE 244 (250)
Q Consensus 177 g--~~~~tp~~fDn~Yf~~ll~~~~~gll~l------~sD~~L~~d~~t~~~v~~yA~~~~~F~~~F~~Am~Km~~ 244 (250)
+ ||++||.+|||+||.+++++++.++|.| .||..+++.+.... ++..| +++.|.+.++..++||++
T Consensus 191 ~~~p~dstp~~FDn~~f~E~l~g~~~~~L~~~~~~~~~sd~r~f~~d~n~t-~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 191 TVLQFFDTTIQFDNKVVTEYLSGTTNNPLVVGPNNTTNSDLRIFSSDGNVT-MNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred CCCCCCCCccccchHHHHHHhcCCCCCceeecCCCCccchhhheecCccHH-HHHhc-ChHHHHHHHHHHHHHHhC
Confidence 3 8999999999999999999988888754 58888888776644 47777 799999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=1.8e-50 Score=359.36 Aligned_cols=218 Identities=28% Similarity=0.449 Sum_probs=192.1
Q ss_pred hhhcCCchhhHHHhhhcccCccccCCCCCCCCCc-ccchhhhhccccCc--hHHHHHHHHhHHHhCC-------CCchhh
Q 025646 26 FIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSANNG--LDIAVRLLEPFKEQFP-------TISYAD 95 (250)
Q Consensus 26 ~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgs-i~~~~E~~~~~N~g--l~~~~~~i~~~k~~~~-------~VS~AD 95 (250)
++....+++.+|||+||++++||.+++.||+||+ |++++|++|+.|.+ |.+++.+|++||+++| .||+||
T Consensus 23 i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~~~~~~~~vS~AD 102 (297)
T cd08200 23 ILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLAPQKDWEVNEPEELAKVLAVLEGIQKEFNESQSGGKKVSLAD 102 (297)
T ss_pred HHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCccccCcCccCcHHHHHHHHHHHHHHHHhcccccCCccccHHH
Confidence 5566678999999999999999999999999986 99999999999999 9999999999999997 799999
Q ss_pred HHHhhhhhhhhhcCC-----CCCCCCCCCCCCCCCCC--C---CCCCCCCC------------ChHHHHHHHHhhcCCCh
Q 025646 96 LYQLAGVVGVEVTGG-----PDIPFHPGRDDKAEPPQ--E---GRLPDAKQ------------GNDHLRQVFGAQMGLSD 153 (250)
Q Consensus 96 ~ialaa~~av~~~GG-----P~~~~~~GR~D~~~~~~--~---~~lP~~~~------------~~~~l~~~F~~~~Gls~ 153 (250)
+|+||+.+|||.+|| |.|+|.+||.|++.+.. + .++|.+.. ..+.|++.| .++|||+
T Consensus 103 LivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~Lrd~f-~rlglsd 181 (297)
T cd08200 103 LIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEMLVDKA-QLLTLTA 181 (297)
T ss_pred HHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHHHHHH-HhCCCCh
Confidence 999999999999999 99999999999998632 1 24464432 336799999 9999999
Q ss_pred hhhhhhccCc-cccccccCCCCCCCCCCCCCcccChHHHHHHhhcc--C----------------CCcc---cccccccc
Q 025646 154 KDIVALSGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGE--K----------------DGLL---QLPSDKAL 211 (250)
Q Consensus 154 ~e~VaL~GaH-tiG~~~~~~~~~~g~~~~tp~~fDn~Yf~~ll~~~--~----------------~gll---~l~sD~~L 211 (250)
+|||||+||| ++|.+|. ++ +.|+|+.+|.+|||.||++|++.. | .|.+ ++++|++|
T Consensus 182 ~EmvaL~Gg~r~lG~~~~-~s-~~G~wT~~p~~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l 259 (297)
T cd08200 182 PEMTVLVGGLRVLGANYG-GS-KHGVFTDRPGVLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVF 259 (297)
T ss_pred HHHhheecchhhcccCCC-CC-CCCCCcCCCCccccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhh
Confidence 9999999998 7999987 45 469999999999999999999631 1 1222 36899999
Q ss_pred cCCCCcHHHHHHhhhC--hHHHHHHHHHHHHHHHhCC
Q 025646 212 LDDPVFRPLVEKYAAD--EDAFFADYAEAHLKLSELG 246 (250)
Q Consensus 212 ~~d~~t~~~v~~yA~~--~~~F~~~F~~Am~Km~~lg 246 (250)
.+|+++|++|+.||.| +++|++||++||.||+++.
T Consensus 260 ~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klmeld 296 (297)
T cd08200 260 GSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMNLD 296 (297)
T ss_pred ccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhcC
Confidence 9999999999999999 9999999999999999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=5.5e-45 Score=355.48 Aligned_cols=218 Identities=28% Similarity=0.445 Sum_probs=190.7
Q ss_pred hhhcCCchhhHHHhhhcccCccccCCCCCCCCCc-ccchhhhhcccc--CchHHHHHHHHhHHHhCC--CCchhhHHHhh
Q 025646 26 FIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSAN--NGLDIAVRLLEPFKEQFP--TISYADLYQLA 100 (250)
Q Consensus 26 ~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgs-i~~~~E~~~~~N--~gl~~~~~~i~~~k~~~~--~VS~AD~iala 100 (250)
++.+...++.+||++||+|++||.+++.||+||+ |++++|++++.| .||..++.+|++||+++| .||.||+|+||
T Consensus 441 i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~pe~~w~~N~p~gL~~vl~~Le~Ik~~f~~~~vS~ADLivLa 520 (716)
T TIGR00198 441 ILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLEPQKNWPVNEPTRLAKVLAVLEKIQAEFAKGPVSLADLIVLG 520 (716)
T ss_pred HHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecchhcCcccCCHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHH
Confidence 5566778999999999999999999999999985 999999999999 899999999999999999 89999999999
Q ss_pred hhhhhhhc---CCC--CCCCCCCCCCCCCCC--CCCCCC---CC------------CCChHHHHHHHHhhcCCChhhhhh
Q 025646 101 GVVGVEVT---GGP--DIPFHPGRDDKAEPP--QEGRLP---DA------------KQGNDHLRQVFGAQMGLSDKDIVA 158 (250)
Q Consensus 101 a~~av~~~---GGP--~~~~~~GR~D~~~~~--~~~~lP---~~------------~~~~~~l~~~F~~~~Gls~~e~Va 158 (250)
+.+|||.+ ||| .|+|.+||.|++.+. +++..| .+ ....+.|++.| .++|||+.||||
T Consensus 521 G~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td~~~~~~l~p~adgfRn~~~~~~~~~~~~~l~d~a-~~lglt~~Emva 599 (716)
T TIGR00198 521 GGAAVEKAALDAGISVNVPFLPGRVDATQAMTDAESFTPLEPIADGFRNYLKRDYAVTPEELLLDKA-QLLTLTAPEMTV 599 (716)
T ss_pred HHHHHHHHHHhCCCCcccCcCCCCCccccCCCCccccccCCCCCcccchhccccccCCHHHHHHHHH-HhCCCChHHHHh
Confidence 99999998 897 689999999999863 333222 11 12345689999 999999999999
Q ss_pred hccCc-cccccccCCCCCCCCCCCCCcccChHHHHHHhhcc--C----------------CCcccc---cccccccCCCC
Q 025646 159 LSGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGE--K----------------DGLLQL---PSDKALLDDPV 216 (250)
Q Consensus 159 L~GaH-tiG~~~~~~~~~~g~~~~tp~~fDn~Yf~~ll~~~--~----------------~gll~l---~sD~~L~~d~~ 216 (250)
|+||| ++|.+|.. + +.|+|+.+|.+|||.||++|++.. + .|.+++ ++|++|.+|++
T Consensus 600 L~Gg~r~lG~~~~~-s-~~G~~T~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~ 677 (716)
T TIGR00198 600 LIGGMRVLGANHGG-S-KHGVFTDRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSI 677 (716)
T ss_pred eecchhhccccCCC-C-CCCCCcCCCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHH
Confidence 99995 99999984 3 469999999999999999999732 1 244444 78999999999
Q ss_pred cHHHHHHhhhCh--HHHHHHHHHHHHHHHhCC
Q 025646 217 FRPLVEKYAADE--DAFFADYAEAHLKLSELG 246 (250)
Q Consensus 217 t~~~v~~yA~~~--~~F~~~F~~Am~Km~~lg 246 (250)
+|++|+.||+|+ ++|++||++||.|++++|
T Consensus 678 lra~aE~YA~dd~~~~F~~DF~~Aw~Klm~ld 709 (716)
T TIGR00198 678 LRAVAEVYAQDDAREKFVKDFVAAWTKVMNLD 709 (716)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHhCC
Confidence 999999999997 899999999999999987
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=6.4e-44 Score=346.37 Aligned_cols=218 Identities=29% Similarity=0.462 Sum_probs=191.2
Q ss_pred hhhcCCchhhHHHhhhcccCccccCCCCCCCCCc-ccchhhhhccccC--chHHHHHHHHhHHHhC-------CCCchhh
Q 025646 26 FIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSANN--GLDIAVRLLEPFKEQF-------PTISYAD 95 (250)
Q Consensus 26 ~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dgs-i~~~~E~~~~~N~--gl~~~~~~i~~~k~~~-------~~VS~AD 95 (250)
|+.+....+.+||++||++++||.+++.||+||. |++++|++++.|. +|..++.+|++||+++ |.||.||
T Consensus 448 i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~~~~~~~~vS~AD 527 (726)
T PRK15061 448 ILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNEPAQLAKVLAVLEGIQAEFNAAQSGGKKVSLAD 527 (726)
T ss_pred HHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecccccCccccCHHHHHHHHHHHHHHHHHHhhccCCCCceeHHH
Confidence 5566668999999999999999999999999986 9999999999999 9999999999999987 6799999
Q ss_pred HHHhhhhhhhhhc---CC--CCCCCCCCCCCCCCCCC--C---CCCCCCC------------CChHHHHHHHHhhcCCCh
Q 025646 96 LYQLAGVVGVEVT---GG--PDIPFHPGRDDKAEPPQ--E---GRLPDAK------------QGNDHLRQVFGAQMGLSD 153 (250)
Q Consensus 96 ~ialaa~~av~~~---GG--P~~~~~~GR~D~~~~~~--~---~~lP~~~------------~~~~~l~~~F~~~~Gls~ 153 (250)
+|+||+.+|||.+ || |.|||.+||.|++.... + .++|... ...+.|++.| .++|||+
T Consensus 528 LivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~~~~~~~e~~L~d~a-~~lglt~ 606 (726)
T PRK15061 528 LIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKKGYSVSPEELLVDKA-QLLTLTA 606 (726)
T ss_pred HHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccccCCCCHHHHHHHHH-HhCCCCh
Confidence 9999999999998 58 99999999999998632 2 2567543 1236799999 9999999
Q ss_pred hhhhhhccCc-cccccccCCCCCCCCCCCCCcccChHHHHHHhhcc--C----------------CCccc---ccccccc
Q 025646 154 KDIVALSGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGE--K----------------DGLLQ---LPSDKAL 211 (250)
Q Consensus 154 ~e~VaL~GaH-tiG~~~~~~~~~~g~~~~tp~~fDn~Yf~~ll~~~--~----------------~gll~---l~sD~~L 211 (250)
.|||||+||| ++|.+|. ++ +.|+|+.+|.+|||.||++|++.. + .|.++ +++|++|
T Consensus 607 ~EmvaL~Gg~r~Lg~~~~-~S-~~G~~T~~p~~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvf 684 (726)
T PRK15061 607 PEMTVLVGGLRVLGANYG-GS-KHGVFTDRPGVLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVF 684 (726)
T ss_pred HHHhheecchhhcccCCC-CC-CCCCCcCCCCccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheec
Confidence 9999999997 7899885 44 479999999999999999999631 1 13332 4789999
Q ss_pred cCCCCcHHHHHHhhhC--hHHHHHHHHHHHHHHHhCC
Q 025646 212 LDDPVFRPLVEKYAAD--EDAFFADYAEAHLKLSELG 246 (250)
Q Consensus 212 ~~d~~t~~~v~~yA~~--~~~F~~~F~~Am~Km~~lg 246 (250)
.+|+++|++|+.||+| +++|++||++||.|+++++
T Consensus 685 gsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvmeld 721 (726)
T PRK15061 685 GSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVMNLD 721 (726)
T ss_pred ccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCC
Confidence 9999999999999999 9999999999999999986
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-40 Score=308.86 Aligned_cols=231 Identities=38% Similarity=0.650 Sum_probs=206.7
Q ss_pred HHHHHHHHhhhhhcC---------CchhhHHHhhhcccCccccCCCCCCCC-CcccchhhhhccccCchHHHHHHHHhHH
Q 025646 16 VEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFK 85 (250)
Q Consensus 16 v~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~s~~~gG~d-gsi~~~~E~~~~~N~gl~~~~~~i~~~k 85 (250)
+..++++|++++++. ...|.+|||+||-+++|+..++.||+. |..+|.++.+||.|.+|++++.+|++||
T Consensus 69 ~~Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G~qRFaPlnSWPDN~nLDKarRLLWPIK 148 (730)
T COG0376 69 LAAVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNANLDKARRLLWPIK 148 (730)
T ss_pred HHHHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCCceecccccCCCcccchHHHHHHhhhHh
Confidence 445789999998876 378999999999999999999999988 6999999999999999999999999999
Q ss_pred HhCC-CCchhhHHHhhhhhhhhhcCCCCCCCCCCCCCCCCCCC-------------------------------------
Q 025646 86 EQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ------------------------------------- 127 (250)
Q Consensus 86 ~~~~-~VS~AD~ialaa~~av~~~GGP~~~~~~GR~D~~~~~~------------------------------------- 127 (250)
++|+ .||+||+|+|++++|++.+|++.+.|..||.|..++..
T Consensus 149 kKYG~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqMGLIYVN 228 (730)
T COG0376 149 KKYGRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQMGLIYVN 228 (730)
T ss_pred HhhcccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhheeeeEEeC
Confidence 9998 89999999999999999999999999999999988732
Q ss_pred -C--CCCCCCCCChHHHHHHHHhhcCCChhhhhhhc-cCccccccccCC-------------------------------
Q 025646 128 -E--GRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLGRCHKER------------------------------- 172 (250)
Q Consensus 128 -~--~~lP~~~~~~~~l~~~F~~~~Gls~~e~VaL~-GaHtiG~~~~~~------------------------------- 172 (250)
+ +..|+|..+..+++..| ++|+++.+|+|||+ ||||+|++|...
T Consensus 229 PEGpng~PDpl~aA~dIRetF-aRMaMNDeETVALiaGGHtfGKtHGag~a~~vg~ePe~a~ie~qGlGW~~~~g~G~G~ 307 (730)
T COG0376 229 PEGPNGNPDPLAAARDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGPASNVGPEPEAAPIEQQGLGWANTYGSGKGP 307 (730)
T ss_pred CCCCCCCCChhhhHHHHHHHH-HHhcCCcHhhhhhhhcccccccccCCCchhhcCCCccccchhhhccccccccCCCcCc
Confidence 1 23678888889999999 99999999999997 699999999742
Q ss_pred ----CCCCCCCCCCCcccChHHHHHHhhccC-------------------------------CCcccccccccccCCCCc
Q 025646 173 ----SGFEGPWTRNPLIFDNSYFTELLTGEK-------------------------------DGLLQLPSDKALLDDPVF 217 (250)
Q Consensus 173 ----~~~~g~~~~tp~~fDn~Yf~~ll~~~~-------------------------------~gll~l~sD~~L~~d~~t 217 (250)
+|.+++|+.+|++|||+||.+|+..++ ..++||.+|++|--||..
T Consensus 308 dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~MlttDlaLr~DP~Y 387 (730)
T COG0376 308 DTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTTDLALRFDPEY 387 (730)
T ss_pred ccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeeccchhhhcChHH
Confidence 123567999999999999999997642 146789999999999999
Q ss_pred HHHHHHhhhChHHHHHHHHHHHHHHHhCCC
Q 025646 218 RPLVEKYAADEDAFFADYAEAHLKLSELGF 247 (250)
Q Consensus 218 ~~~v~~yA~~~~~F~~~F~~Am~Km~~lgv 247 (250)
++|.++|..|++.|.+.|+.||.||..-..
T Consensus 388 ~kIs~rf~e~pd~F~~~FArAWfKLtHRDM 417 (730)
T COG0376 388 EKISRRFLEDPDEFADAFARAWFKLTHRDM 417 (730)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHhhccC
Confidence 999999999999999999999999987544
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.89 E-value=5.5e-23 Score=192.96 Aligned_cols=219 Identities=29% Similarity=0.451 Sum_probs=177.1
Q ss_pred hhhhcCCchhhHHHhhhcccCccccCCCCCCCCC-cccchhhhhccccC--chHHHHHHHHhHHHhCC-CCchhhHHHhh
Q 025646 25 GFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFG-TMRLAAEQAHSANN--GLDIAVRLLEPFKEQFP-TISYADLYQLA 100 (250)
Q Consensus 25 ~~~~~~~~a~~~lRl~FHDc~~~d~s~~~gG~dg-si~~~~E~~~~~N~--gl~~~~~~i~~~k~~~~-~VS~AD~iala 100 (250)
+|+.+.-..+.+|-.+|..+.+|..|++.||+|| .|++.+.++|+.|. .|.+++.+++.|++++. .||.||+|+|+
T Consensus 457 ~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLaPqkdWevN~P~~l~kvl~~le~iq~~fnkkvSlADlIVL~ 536 (730)
T COG0376 457 KILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNQPAELAKVLAVLEKIQKEFNKKVSLADLIVLG 536 (730)
T ss_pred HHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeecccccCCCCCHHHHHHHHHHHHHHHHHhcCccchhHheeec
Confidence 3667777889999999999999999999999997 89999999999996 57788999999999987 69999999999
Q ss_pred hhhhhhhc---CC--CCCCCCCCCCCCCCCCC--C---CCCCCC-----------CCCh-HHHHHHHHhhcCCChhhhhh
Q 025646 101 GVVGVEVT---GG--PDIPFHPGRDDKAEPPQ--E---GRLPDA-----------KQGN-DHLRQVFGAQMGLSDKDIVA 158 (250)
Q Consensus 101 a~~av~~~---GG--P~~~~~~GR~D~~~~~~--~---~~lP~~-----------~~~~-~~l~~~F~~~~Gls~~e~Va 158 (250)
+.+||+.+ +| -.+||.+||.|+++... + -.-|.. ..+. +-|++.- +.++||..||++
T Consensus 537 G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvDkA-qlL~LtapemtV 615 (730)
T COG0376 537 GNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVDKA-QLLTLTAPEMTV 615 (730)
T ss_pred chHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHHHH-HHhccCCccceE
Confidence 99999974 45 46788999999988631 1 111211 1233 3477888 899999999999
Q ss_pred hccCc-cccccccCCCCCCCCCCCCCcccChHHHHHHhhccC------------------CCccc---ccccccccCCCC
Q 025646 159 LSGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEK------------------DGLLQ---LPSDKALLDDPV 216 (250)
Q Consensus 159 L~GaH-tiG~~~~~~~~~~g~~~~tp~~fDn~Yf~~ll~~~~------------------~gll~---l~sD~~L~~d~~ 216 (250)
|+||- .+|.-+.. + -+|.|+..|.++.|.||.||++... .|.+. -..|+.+-++++
T Consensus 616 LiGGlRvLg~n~g~-s-~~GVfT~~pg~LtndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~ 693 (730)
T COG0376 616 LIGGLRVLGANYGG-S-KHGVFTDRPGVLTNDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSE 693 (730)
T ss_pred EEcceEeeccCCCC-C-ccceeccCcccccchhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHH
Confidence 99987 44543331 1 2588999999999999999997521 13221 238999999999
Q ss_pred cHHHHHHhhhC--hHHHHHHHHHHHHHHHhCC
Q 025646 217 FRPLVEKYAAD--EDAFFADYAEAHLKLSELG 246 (250)
Q Consensus 217 t~~~v~~yA~~--~~~F~~~F~~Am~Km~~lg 246 (250)
.|.+.+.||++ +++|.+||+.||.|..++.
T Consensus 694 LRA~aEVYa~dda~ekFv~DFvaaw~kVMn~D 725 (730)
T COG0376 694 LRALAEVYASDDAKEKFVKDFVAAWTKVMNLD 725 (730)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHhccc
Confidence 99999999986 8899999999999998863
No 19
>cd07922 CarBa CarBa is the A subunit of 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. CarBa is the A subunit of 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. 2-aminophenol 1,6-dioxygenase is a key enzyme in the carbazole degradation pathway isolated from bacterial strains with carbazole degradation ability. The enzyme is a heterotetramer composed of two A and two B subunits. CarB belongs to the class III extradiol dioxygenase family, composed of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Although the enzyme was originally isolated as a meta-cleavage enzyme for 2'-aminobiphenyl-2,3-diol involved in carbazole degradation, the enzyme has also shown high specificity for 2,3-dihydroxybiphenyl.
Probab=46.83 E-value=13 Score=27.40 Aligned_cols=31 Identities=26% Similarity=0.543 Sum_probs=22.1
Q ss_pred HHHHHhhhChHHHHHHHH-----------HHHHHHHhCCCCC
Q 025646 219 PLVEKYAADEDAFFADYA-----------EAHLKLSELGFAE 249 (250)
Q Consensus 219 ~~v~~yA~~~~~F~~~F~-----------~Am~Km~~lgv~~ 249 (250)
.+.++|..|++.+++.+. --|.+|..+||+|
T Consensus 18 ~~rerF~~DPea~~~~~gLt~eE~~aL~~~D~~~L~~lGvhp 59 (81)
T cd07922 18 GLIERFQDDPSAVFEEYGLTPAERAALREGTFGALTSIGVHP 59 (81)
T ss_pred HHHHHHHHCHHHHHHHcCCCHHHHHHHHccCHHHHHHcCCCH
Confidence 355667788888877762 3367888888875
No 20
>PRK12346 transaldolase A; Provisional
Probab=37.76 E-value=41 Score=31.07 Aligned_cols=85 Identities=15% Similarity=0.137 Sum_probs=50.7
Q ss_pred HHHHHhHHHhCCCCchhhHHHhhhhhhhhh--cCCCCCCCCCCCCCCCCCCC---CCCCCCCC---CChHHHHHHHHhhc
Q 025646 78 VRLLEPFKEQFPTISYADLYQLAGVVGVEV--TGGPDIPFHPGRDDKAEPPQ---EGRLPDAK---QGNDHLRQVFGAQM 149 (250)
Q Consensus 78 ~~~i~~~k~~~~~VS~AD~ialaa~~av~~--~GGP~~~~~~GR~D~~~~~~---~~~lP~~~---~~~~~l~~~F~~~~ 149 (250)
+..+..++++ .|+|-=.+.+....|+.+ +|-..+..++||.|...-.. ...-|... ..+.++.+.| ++.
T Consensus 139 i~A~~~L~~~--GI~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~-k~~ 215 (316)
T PRK12346 139 IRAAEELEKE--GINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYY-KQH 215 (316)
T ss_pred HHHHHHHHHC--CCceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccccccccccCCChHHHHHHHHHHH-HHc
Confidence 3444444332 555555555655555443 67788999999998754221 11112222 2356688888 787
Q ss_pred CCC----------hhhhhhhccCccc
Q 025646 150 GLS----------DKDIVALSGGHTL 165 (250)
Q Consensus 150 Gls----------~~e~VaL~GaHti 165 (250)
|+. .+|+.+|.|+|.+
T Consensus 216 ~~~T~Vm~ASfRn~~qi~alaG~d~l 241 (316)
T PRK12346 216 RYETIVMGASFRRTEQILALAGCDRL 241 (316)
T ss_pred CCCcEEEecccCCHHHHHHHhCCCEE
Confidence 764 5777888888843
No 21
>PF08383 Maf_N: Maf N-terminal region; InterPro: IPR013592 This region is found in various leucine zipper transcription factors of the Maf family. These are implicated in the regulation of insulin gene expression [], in erythroid differentiation [], and in differentiation of the neuroretina [].
Probab=36.49 E-value=23 Score=21.84 Aligned_cols=15 Identities=47% Similarity=0.749 Sum_probs=12.3
Q ss_pred hhcCCChhhhh-hhcc
Q 025646 147 AQMGLSDKDIV-ALSG 161 (250)
Q Consensus 147 ~~~Gls~~e~V-aL~G 161 (250)
...|||++|.| ||+|
T Consensus 19 e~l~LtpEDAvEaLi~ 34 (35)
T PF08383_consen 19 EALGLTPEDAVEALIG 34 (35)
T ss_pred hhcCCCHHHHHHHHhc
Confidence 56799999999 7765
No 22
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.
Probab=35.16 E-value=49 Score=30.52 Aligned_cols=84 Identities=14% Similarity=0.141 Sum_probs=47.9
Q ss_pred HHHHHHhHHHhCCCCchhhHHHhhhhhhhhh--cCCCCCCCCCCCCCCCCCCCCC--CCCC----CCCChHHHHHHHHhh
Q 025646 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVEV--TGGPDIPFHPGRDDKAEPPQEG--RLPD----AKQGNDHLRQVFGAQ 148 (250)
Q Consensus 77 ~~~~i~~~k~~~~~VS~AD~ialaa~~av~~--~GGP~~~~~~GR~D~~~~~~~~--~lP~----~~~~~~~l~~~F~~~ 148 (250)
++..+..++++ .|+|-=.+.+....|+.+ +|-..+..++||.|-..-...+ ..+. +-..+.++.+.| ++
T Consensus 137 Gi~A~~~L~~~--GI~vn~TlvFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~d~Gv~~v~~i~~~~-~~ 213 (313)
T cd00957 137 GIQAAKQLEKE--GIHCNLTLLFSFAQAVACAEAGVTLISPFVGRILDWYKKHSGDKAYTAEEDPGVASVKKIYNYY-KK 213 (313)
T ss_pred HHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEeecchHHHhhhhccccccCCccCCcHHHHHHHHHHHH-HH
Confidence 34444444432 455544455555544443 5777889999999865322111 1111 112456788888 88
Q ss_pred cCCC----------hhhhhhhccCc
Q 025646 149 MGLS----------DKDIVALSGGH 163 (250)
Q Consensus 149 ~Gls----------~~e~VaL~GaH 163 (250)
.|+. ..|+..|.|+|
T Consensus 214 ~~~~T~vmaASfRn~~~v~~laG~d 238 (313)
T cd00957 214 FGYKTKVMGASFRNIGQILALAGCD 238 (313)
T ss_pred cCCCcEEEecccCCHHHHHHHhCCC
Confidence 8875 45666677776
No 23
>PTZ00411 transaldolase-like protein; Provisional
Probab=32.67 E-value=51 Score=30.69 Aligned_cols=86 Identities=14% Similarity=0.134 Sum_probs=49.4
Q ss_pred HHHHHHhHHHhCCCCchhhHHHhhhhhhhh--hcCCCCCCCCCCCCCCCCCCCC---CCCCCCCC---ChHHHHHHHHhh
Q 025646 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQE---GRLPDAKQ---GNDHLRQVFGAQ 148 (250)
Q Consensus 77 ~~~~i~~~k~~~~~VS~AD~ialaa~~av~--~~GGP~~~~~~GR~D~~~~~~~---~~lP~~~~---~~~~l~~~F~~~ 148 (250)
++..+..++++ .|.|-=.+.+....|+. .+|-..+..++||.+...-.+. ...+.... .+.++.+.| ++
T Consensus 149 Gi~Aa~~L~~e--GI~~N~TlvFS~~QA~aaaeAGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~-k~ 225 (333)
T PTZ00411 149 GIQAAKALEKE--GIHCNLTLLFSFAQAVACAQAGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYY-KK 225 (333)
T ss_pred HHHHHHHHHHC--CCceeEeEecCHHHHHHHHHcCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHH-HH
Confidence 34444444432 34444444454444443 3577788999999966543221 11122222 356678888 88
Q ss_pred cCCC----------hhhhhhhccCccc
Q 025646 149 MGLS----------DKDIVALSGGHTL 165 (250)
Q Consensus 149 ~Gls----------~~e~VaL~GaHti 165 (250)
.|+. .+|+..|.|+|.+
T Consensus 226 ~g~~T~Im~ASfRn~~qi~~laG~D~l 252 (333)
T PTZ00411 226 HGYKTIVMGASFRNTGEILELAGCDKL 252 (333)
T ss_pred cCCCeEEEecccCCHHHHHHHHCCCEE
Confidence 7864 5788888999944
No 24
>PRK05269 transaldolase B; Provisional
Probab=28.39 E-value=43 Score=30.94 Aligned_cols=86 Identities=15% Similarity=0.113 Sum_probs=48.0
Q ss_pred HHHHHHhHHHhCCCCchhhHHHhhhhhhhh--hcCCCCCCCCCCCCCCCCCCC---CCCCCCC---CCChHHHHHHHHhh
Q 025646 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQ---EGRLPDA---KQGNDHLRQVFGAQ 148 (250)
Q Consensus 77 ~~~~i~~~k~~~~~VS~AD~ialaa~~av~--~~GGP~~~~~~GR~D~~~~~~---~~~lP~~---~~~~~~l~~~F~~~ 148 (250)
++..+..++++ .|.|-=.+.+....|+. .+|-..+..++||.|...-.. ...-+.. -..+.++.+.| +.
T Consensus 139 Gi~A~~~L~~~--GI~vn~TlvFs~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~-k~ 215 (318)
T PRK05269 139 GIRAAEQLEKE--GINCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKKNTGKKEYAPAEDPGVVSVTKIYNYY-KK 215 (318)
T ss_pred HHHHHHHHHHc--CCceeEeEecCHHHHHHHHHcCCCEEEeeccHHHHHhhhcccccccCcCCCcHHHHHHHHHHHH-HH
Confidence 34444444332 34444344444444433 357778899999998653211 1111112 22456788888 88
Q ss_pred cCCC----------hhhhhhhccCccc
Q 025646 149 MGLS----------DKDIVALSGGHTL 165 (250)
Q Consensus 149 ~Gls----------~~e~VaL~GaHti 165 (250)
.|+. ..++..|.|+|++
T Consensus 216 ~~~~t~im~ASfrn~~~v~~laG~d~v 242 (318)
T PRK05269 216 HGYKTVVMGASFRNTGQILELAGCDRL 242 (318)
T ss_pred cCCCceEEeeccCCHHHHHHHhCCCeE
Confidence 8875 4666778888854
No 25
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=28.24 E-value=87 Score=29.80 Aligned_cols=86 Identities=16% Similarity=0.203 Sum_probs=50.5
Q ss_pred HHHHHHhHHHhCCCCchhhHHHhhhhhhhhh--cCCCCCCCCCCCCCCCCCCCCC--CCCCCCC----ChHHHHHHHHhh
Q 025646 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVEV--TGGPDIPFHPGRDDKAEPPQEG--RLPDAKQ----GNDHLRQVFGAQ 148 (250)
Q Consensus 77 ~~~~i~~~k~~~~~VS~AD~ialaa~~av~~--~GGP~~~~~~GR~D~~~~~~~~--~lP~~~~----~~~~l~~~F~~~ 148 (250)
++..+..++++ .|.|-=.+.+....|+.+ +|-..+..++||.|...-...+ .+|...+ .+.++.+.| +.
T Consensus 143 Gi~A~~~L~~~--GI~~n~TlvFS~~QA~aaaeAGa~~ISPfVgRi~dw~~~~~g~~~~~~~~dpGv~~v~~i~~~~-~~ 219 (391)
T PRK12309 143 GIKAAEVLEKE--GIHCNLTLLFGFHQAIACAEAGVTLISPFVGRILDWYKKETGRDSYPGAEDPGVQSVTQIYNYY-KK 219 (391)
T ss_pred HHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEeecchhhhhhhhccCCCccccccchHHHHHHHHHHHH-Hh
Confidence 34444444432 444444445555544443 5778899999999885432221 1332222 356688888 77
Q ss_pred cCCC----------hhhhhhhccCccc
Q 025646 149 MGLS----------DKDIVALSGGHTL 165 (250)
Q Consensus 149 ~Gls----------~~e~VaL~GaHti 165 (250)
.|+. ..++..|.|+|.+
T Consensus 220 ~~~~T~Im~ASfRn~~~v~~laG~d~~ 246 (391)
T PRK12309 220 FGYKTEVMGASFRNIGEIIELAGCDLL 246 (391)
T ss_pred cCCCcEEEecccCCHHHHHHHHCCCee
Confidence 7764 5677888888844
No 26
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=23.92 E-value=70 Score=29.56 Aligned_cols=86 Identities=15% Similarity=0.133 Sum_probs=48.3
Q ss_pred HHHHHHhHHHhCCCCchhhHHHhhhhhhhh--hcCCCCCCCCCCCCCCCCCCCC---CCCCCCC---CChHHHHHHHHhh
Q 025646 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQE---GRLPDAK---QGNDHLRQVFGAQ 148 (250)
Q Consensus 77 ~~~~i~~~k~~~~~VS~AD~ialaa~~av~--~~GGP~~~~~~GR~D~~~~~~~---~~lP~~~---~~~~~l~~~F~~~ 148 (250)
++..+..++++ .|+|-=.+.+....|+. .+|-..+..++||.+-..-... ...+... ..+.++.+.| ++
T Consensus 137 Gi~A~~~L~~~--GI~vN~TliFS~~Qa~aaa~AGa~~ISPFVgRi~dw~~~~~g~~~~~~~~d~Gv~~v~~i~~~~-k~ 213 (317)
T TIGR00874 137 GIRAAEELEKE--GIHCNLTLLFSFVQAIACAEAKVTLISPFVGRILDWYKAATGKKEYSIEEDPGVASVKKIYNYY-KK 213 (317)
T ss_pred HHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEeecchHhHhhhhccCccccccccCchHHHHHHHHHHH-HH
Confidence 34444444433 33333333444443333 3577889999999977432211 1112222 3456688888 88
Q ss_pred cCCC----------hhhhhhhccCccc
Q 025646 149 MGLS----------DKDIVALSGGHTL 165 (250)
Q Consensus 149 ~Gls----------~~e~VaL~GaHti 165 (250)
.|+. .+|+.+|.|+|.+
T Consensus 214 ~g~~T~Im~ASfRn~~qv~~laG~d~~ 240 (317)
T TIGR00874 214 HGYPTEVMGASFRNKEEILALAGCDRL 240 (317)
T ss_pred cCCCcEEEeeccCCHHHHHHHHCCCeE
Confidence 8874 5777888888843
No 27
>cd00439 Transaldolase Transaldolase. Enzymes found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.
Probab=20.24 E-value=54 Score=29.15 Aligned_cols=74 Identities=12% Similarity=-0.044 Sum_probs=39.9
Q ss_pred HHHHHHhHHHhCCCCchhhHHHhhhhhhhh--hcCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCh---HHHHHHHHhh
Q 025646 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQ---EGRLPDAKQGN---DHLRQVFGAQ 148 (250)
Q Consensus 77 ~~~~i~~~k~~~~~VS~AD~ialaa~~av~--~~GGP~~~~~~GR~D~~~~~~---~~~lP~~~~~~---~~l~~~F~~~ 148 (250)
++..+..++++ .|++-=.+.+....|+. .+|...+.+++||.|...-.. .+.=|.....+ .++.+.| +.
T Consensus 128 Gl~A~~~L~~~--GI~vn~T~vfs~~Qa~~aa~Aga~~ispfvgRid~~~~~~~~~~~~d~~~~~gi~~~~~~~~~~-~~ 204 (252)
T cd00439 128 GIPAIKDLIAA--GISVNVTLIFSIAQYEAVADAGTSVASPFVSRIDTLMDKMLEQIGLDLRGKAGVAQVTLAYKLY-KQ 204 (252)
T ss_pred HHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEEeccHHHHHhhhhccccccccccCcHHHHHHHHHHHH-HH
Confidence 45555555543 44444444555554444 357778899999999876521 11112212333 3566666 66
Q ss_pred cCCCh
Q 025646 149 MGLSD 153 (250)
Q Consensus 149 ~Gls~ 153 (250)
.|...
T Consensus 205 ~~~~t 209 (252)
T cd00439 205 KFKKQ 209 (252)
T ss_pred hCCCC
Confidence 66543
Done!