Query 025648
Match_columns 250
No_of_seqs 392 out of 1695
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 14:38:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025648.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025648hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3idv_A Protein disulfide-isome 100.0 4.7E-29 1.6E-33 210.4 6.6 176 9-209 30-237 (241)
2 3apo_A DNAJ homolog subfamily 99.9 8.5E-26 2.9E-30 221.2 6.6 181 10-208 454-655 (780)
3 3uem_A Protein disulfide-isome 99.9 2E-25 6.9E-30 199.8 3.2 180 10-209 134-357 (361)
4 2ywm_A Glutaredoxin-like prote 99.9 6.2E-25 2.1E-29 184.6 4.3 153 9-168 18-195 (229)
5 1a8l_A Protein disulfide oxido 99.9 1.6E-24 5.5E-29 181.4 6.0 156 10-173 21-203 (226)
6 2hls_A Protein disulfide oxido 99.9 2.7E-24 9.3E-29 183.5 3.7 185 8-220 22-237 (243)
7 1sji_A Calsequestrin 2, calseq 99.9 4.5E-24 1.5E-28 190.8 4.0 172 9-208 26-224 (350)
8 3apo_A DNAJ homolog subfamily 99.9 1.5E-23 5.3E-28 205.2 6.4 157 10-173 562-740 (780)
9 3us3_A Calsequestrin-1; calciu 99.9 2.1E-23 7.3E-28 187.9 5.9 174 9-208 28-226 (367)
10 3zzx_A Thioredoxin; oxidoreduc 99.9 4E-22 1.4E-26 148.8 11.5 87 8-96 17-104 (105)
11 3ed3_A Protein disulfide-isome 99.9 8.5E-23 2.9E-27 179.3 5.9 175 8-208 32-266 (298)
12 2r2j_A Thioredoxin domain-cont 99.9 1.8E-22 6.2E-27 182.6 7.5 174 9-208 20-217 (382)
13 3f8u_A Protein disulfide-isome 99.8 8.2E-22 2.8E-26 182.8 6.5 178 11-208 21-216 (481)
14 3h79_A Thioredoxin-like protei 99.8 2E-20 7E-25 143.1 10.4 90 7-96 29-126 (127)
15 3gnj_A Thioredoxin domain prot 99.8 5.1E-20 1.7E-24 136.6 11.9 91 8-98 19-110 (111)
16 2av4_A Thioredoxin-like protei 99.8 3E-20 1E-24 147.2 10.1 89 9-97 39-138 (160)
17 2trx_A Thioredoxin; electron t 99.8 1.5E-19 5.2E-24 133.5 12.6 91 8-98 17-108 (108)
18 3qfa_C Thioredoxin; protein-pr 99.8 8.3E-20 2.8E-24 137.8 11.3 86 10-97 30-116 (116)
19 2qsi_A Putative hydrogenase ex 99.8 4.9E-20 1.7E-24 143.3 10.2 90 8-97 30-122 (137)
20 4euy_A Uncharacterized protein 99.8 5.7E-20 2E-24 135.8 9.9 88 9-97 16-104 (105)
21 2voc_A Thioredoxin; electron t 99.8 1.9E-19 6.5E-24 134.6 12.2 91 10-100 16-107 (112)
22 3die_A Thioredoxin, TRX; elect 99.8 2.7E-19 9.3E-24 131.4 12.5 87 10-96 18-105 (106)
23 3tco_A Thioredoxin (TRXA-1); d 99.8 2.6E-19 8.9E-24 132.0 12.4 89 9-97 19-108 (109)
24 1dby_A Chloroplast thioredoxin 99.8 3.8E-19 1.3E-23 131.1 12.9 90 8-97 16-106 (107)
25 1t00_A Thioredoxin, TRX; redox 99.8 3.3E-19 1.1E-23 132.7 12.6 91 8-98 20-111 (112)
26 1w4v_A Thioredoxin, mitochondr 99.8 3.5E-19 1.2E-23 134.7 12.9 91 8-98 28-119 (119)
27 3q6o_A Sulfhydryl oxidase 1; p 99.8 8.4E-21 2.9E-25 161.2 4.3 94 7-101 26-130 (244)
28 1x5d_A Protein disulfide-isome 99.8 1.5E-19 5E-24 138.5 10.6 92 8-99 22-118 (133)
29 3f3q_A Thioredoxin-1; His TAG, 99.8 4.6E-19 1.6E-23 132.1 13.0 88 8-97 21-109 (109)
30 2o8v_B Thioredoxin 1; disulfid 99.8 2.7E-19 9.3E-24 137.5 11.8 91 8-98 37-128 (128)
31 3hz4_A Thioredoxin; NYSGXRC, P 99.8 3.1E-19 1.1E-23 139.0 12.0 93 7-99 20-113 (140)
32 1thx_A Thioredoxin, thioredoxi 99.8 5E-19 1.7E-23 131.9 12.7 92 8-99 22-114 (115)
33 1nsw_A Thioredoxin, TRX; therm 99.8 3.9E-19 1.3E-23 130.6 11.9 90 8-97 14-104 (105)
34 2ppt_A Thioredoxin-2; thiredox 99.8 4.7E-19 1.6E-23 140.8 13.1 91 9-99 62-153 (155)
35 2i4a_A Thioredoxin; acidophIle 99.8 4.8E-19 1.6E-23 130.3 12.0 89 8-96 17-106 (107)
36 3ul3_B Thioredoxin, thioredoxi 99.8 1.9E-19 6.6E-24 137.9 10.1 88 8-95 39-127 (128)
37 3p2a_A Thioredoxin 2, putative 99.8 5E-19 1.7E-23 138.7 12.7 92 9-100 53-145 (148)
38 2qgv_A Hydrogenase-1 operon pr 99.8 1.1E-19 3.7E-24 141.9 8.7 91 10-100 33-127 (140)
39 2dml_A Protein disulfide-isome 99.8 2.9E-19 9.9E-24 136.6 10.9 91 8-98 32-124 (130)
40 2dj1_A Protein disulfide-isome 99.8 4.6E-19 1.6E-23 137.2 12.2 93 9-102 32-128 (140)
41 3m9j_A Thioredoxin; oxidoreduc 99.8 6E-19 2E-23 129.5 12.2 86 10-97 19-105 (105)
42 1gh2_A Thioredoxin-like protei 99.8 1E-18 3.4E-23 129.3 13.0 88 9-98 19-107 (107)
43 2wz9_A Glutaredoxin-3; protein 99.8 8E-19 2.7E-23 138.8 13.2 88 11-100 32-120 (153)
44 1fb6_A Thioredoxin M; electron 99.8 8.8E-19 3E-23 128.4 12.5 91 7-97 14-105 (105)
45 3hxs_A Thioredoxin, TRXP; elec 99.8 8.1E-19 2.8E-23 136.1 12.8 89 10-98 50-139 (141)
46 2e0q_A Thioredoxin; electron t 99.8 1.1E-18 3.8E-23 127.2 12.6 89 9-98 14-103 (104)
47 2yzu_A Thioredoxin; redox prot 99.8 9.1E-19 3.1E-23 128.9 11.7 92 8-99 15-107 (109)
48 2vlu_A Thioredoxin, thioredoxi 99.8 1.4E-18 4.9E-23 131.3 13.0 88 10-99 33-121 (122)
49 1ep7_A Thioredoxin CH1, H-type 99.8 1.3E-18 4.3E-23 129.4 12.4 87 11-98 24-111 (112)
50 3uvt_A Thioredoxin domain-cont 99.8 1.1E-18 3.7E-23 129.2 11.7 86 11-96 21-110 (111)
51 2l5l_A Thioredoxin; structural 99.8 3.1E-18 1.1E-22 132.5 14.5 92 9-101 36-129 (136)
52 3gix_A Thioredoxin-like protei 99.8 7E-19 2.4E-23 139.0 10.9 89 9-97 21-120 (149)
53 2i1u_A Thioredoxin, TRX, MPT46 99.8 9.5E-19 3.2E-23 131.8 10.9 91 8-98 27-118 (121)
54 3apq_A DNAJ homolog subfamily 99.8 7.9E-19 2.7E-23 145.9 11.2 97 9-105 112-209 (210)
55 2l57_A Uncharacterized protein 99.8 2.2E-18 7.6E-23 131.2 12.8 95 7-101 22-120 (126)
56 2b5e_A Protein disulfide-isome 99.8 5.4E-19 1.8E-23 164.9 11.0 134 8-153 28-166 (504)
57 3t58_A Sulfhydryl oxidase 1; o 99.8 1.6E-19 5.6E-24 169.4 7.0 95 7-101 26-130 (519)
58 2pu9_C TRX-F, thioredoxin F-ty 99.8 3.3E-18 1.1E-22 127.2 12.7 86 10-97 23-110 (111)
59 3aps_A DNAJ homolog subfamily 99.8 1.1E-18 3.7E-23 131.9 10.1 92 8-99 18-114 (122)
60 2l6c_A Thioredoxin; oxidoreduc 99.8 1.6E-18 5.3E-23 129.4 10.7 90 9-99 17-107 (110)
61 3dxb_A Thioredoxin N-terminall 99.8 1.8E-18 6.1E-23 145.1 12.3 95 7-101 26-121 (222)
62 1r26_A Thioredoxin; redox-acti 99.8 2.7E-18 9.2E-23 131.5 12.2 88 9-98 35-123 (125)
63 2oe3_A Thioredoxin-3; electron 99.8 2.3E-18 7.8E-23 129.6 11.5 86 8-95 27-113 (114)
64 3ga4_A Dolichyl-diphosphooligo 99.8 2.6E-18 8.8E-23 139.6 12.1 102 9-110 35-165 (178)
65 1x5e_A Thioredoxin domain cont 99.8 1.6E-18 5.6E-23 132.0 10.3 90 13-103 24-115 (126)
66 1mek_A Protein disulfide isome 99.8 7.1E-19 2.4E-23 131.7 8.1 92 9-100 22-119 (120)
67 1xwb_A Thioredoxin; dimerizati 99.8 5.1E-18 1.7E-22 124.5 12.6 86 10-96 19-105 (106)
68 1syr_A Thioredoxin; SGPP, stru 99.8 5.3E-18 1.8E-22 126.6 12.1 87 9-97 24-111 (112)
69 1oaz_A Thioredoxin 1; immune s 99.8 7.2E-19 2.5E-23 134.3 7.4 91 8-98 18-123 (123)
70 1v98_A Thioredoxin; oxidoreduc 99.8 6.9E-18 2.3E-22 131.0 13.1 90 8-98 48-138 (140)
71 3qou_A Protein YBBN; thioredox 99.8 2.7E-18 9.3E-23 148.6 11.9 90 9-98 24-114 (287)
72 1faa_A Thioredoxin F; electron 99.8 5.8E-18 2E-22 128.4 12.3 87 9-97 35-123 (124)
73 2dj3_A Protein disulfide-isome 99.8 1.4E-18 4.7E-23 133.3 8.3 95 6-100 20-120 (133)
74 2vim_A Thioredoxin, TRX; thior 99.8 9.1E-18 3.1E-22 122.8 12.4 86 10-97 18-104 (104)
75 2xc2_A Thioredoxinn; oxidoredu 99.8 7.6E-18 2.6E-22 126.6 12.0 85 10-97 32-117 (117)
76 2djj_A PDI, protein disulfide- 99.8 2.5E-18 8.7E-23 129.6 9.3 89 8-99 22-118 (121)
77 3d6i_A Monothiol glutaredoxin- 99.8 8.3E-18 2.9E-22 125.1 11.7 88 9-98 19-109 (112)
78 3d22_A TRXH4, thioredoxin H-ty 99.8 7.3E-18 2.5E-22 130.5 11.6 89 10-100 45-134 (139)
79 1xfl_A Thioredoxin H1; AT3G510 99.7 1.4E-17 4.7E-22 127.2 12.6 86 10-97 37-123 (124)
80 1zma_A Bacterocin transport ac 99.7 1.5E-18 5.2E-23 130.8 6.9 86 9-94 27-117 (118)
81 2j23_A Thioredoxin; immune pro 99.7 6.3E-18 2.2E-22 128.2 9.9 88 9-97 31-120 (121)
82 1qgv_A Spliceosomal protein U5 99.7 7.8E-18 2.7E-22 131.9 10.5 89 10-98 22-121 (142)
83 3emx_A Thioredoxin; structural 99.7 5.8E-18 2E-22 131.0 9.0 87 13-101 33-129 (135)
84 2vm1_A Thioredoxin, thioredoxi 99.7 3.1E-17 1.1E-21 122.7 12.3 88 10-99 27-115 (118)
85 3cxg_A Putative thioredoxin; m 99.7 1.1E-17 3.7E-22 129.3 9.6 88 9-99 38-130 (133)
86 2f51_A Thioredoxin; electron t 99.7 2.2E-17 7.6E-22 124.8 10.8 90 9-100 21-115 (118)
87 1ti3_A Thioredoxin H, PTTRXH1; 99.7 3.5E-17 1.2E-21 121.5 10.9 86 10-97 25-111 (113)
88 2es7_A Q8ZP25_salty, putative 99.7 7.4E-18 2.5E-22 132.3 7.3 94 10-104 33-131 (142)
89 2dj0_A Thioredoxin-related tra 99.7 1.6E-18 5.6E-23 134.2 2.9 88 9-96 24-119 (137)
90 3idv_A Protein disulfide-isome 99.7 2.9E-17 9.9E-22 138.0 10.6 92 9-101 145-240 (241)
91 3evi_A Phosducin-like protein 99.7 5.6E-17 1.9E-21 123.4 11.1 82 11-96 23-112 (118)
92 1fo5_A Thioredoxin; disulfide 99.7 1.6E-17 5.6E-22 117.2 7.6 83 12-97 3-85 (85)
93 1nho_A Probable thioredoxin; b 99.7 2.1E-17 7.3E-22 116.6 8.1 82 13-97 3-84 (85)
94 1a8l_A Protein disulfide oxido 99.7 6.3E-17 2.2E-21 135.0 10.9 88 10-97 132-225 (226)
95 3fk8_A Disulphide isomerase; A 99.7 3.2E-17 1.1E-21 125.9 8.2 89 9-97 27-132 (133)
96 2kuc_A Putative disulphide-iso 99.7 5.3E-17 1.8E-21 123.9 9.2 92 9-100 25-123 (130)
97 2dbc_A PDCL2, unnamed protein 99.7 1.8E-16 6.2E-21 122.8 11.7 85 10-98 29-121 (135)
98 2fwh_A Thiol:disulfide interch 99.7 5.1E-17 1.7E-21 125.5 8.0 89 10-99 30-129 (134)
99 2yj7_A LPBCA thioredoxin; oxid 99.5 2.1E-18 7.2E-23 126.1 0.0 89 8-96 16-105 (106)
100 3kp8_A Vkorc1/thioredoxin doma 99.7 3.5E-17 1.2E-21 122.1 5.6 79 10-95 11-92 (106)
101 1wmj_A Thioredoxin H-type; str 99.7 3.1E-17 1E-21 125.0 2.9 89 10-100 35-124 (130)
102 3uem_A Protein disulfide-isome 99.6 2.8E-16 9.4E-21 140.3 9.4 90 7-98 263-357 (361)
103 3dml_A Putative uncharacterize 99.6 3.2E-16 1.1E-20 118.6 8.1 86 10-98 17-110 (116)
104 3f8u_A Protein disulfide-isome 99.6 4.1E-16 1.4E-20 144.4 9.7 95 6-101 365-464 (481)
105 2ju5_A Thioredoxin disulfide i 99.6 1.2E-15 3.9E-20 120.8 9.8 89 9-99 45-153 (154)
106 2hls_A Protein disulfide oxido 99.6 1.5E-15 5.3E-20 129.1 11.2 88 10-100 137-228 (243)
107 2lst_A Thioredoxin; structural 99.4 3E-17 1E-21 125.4 0.0 93 8-100 16-118 (130)
108 2trc_P Phosducin, MEKA, PP33; 99.6 4.2E-16 1.4E-20 130.6 6.1 86 10-97 119-212 (217)
109 3f9u_A Putative exported cytoc 99.6 5.9E-16 2E-20 124.1 6.7 88 9-97 45-165 (172)
110 1a0r_P Phosducin, MEKA, PP33; 99.6 1.2E-15 4.2E-20 130.0 8.9 87 10-98 132-226 (245)
111 2b5x_A YKUV protein, TRXY; thi 99.6 6.6E-15 2.2E-19 113.7 12.3 90 10-99 28-146 (148)
112 2ywm_A Glutaredoxin-like prote 99.6 2.9E-15 9.8E-20 125.4 10.5 85 11-98 136-220 (229)
113 1wou_A Thioredoxin -related pr 99.6 1.3E-15 4.4E-20 115.8 7.5 85 10-95 23-122 (123)
114 1ilo_A Conserved hypothetical 99.6 2.8E-15 9.6E-20 103.9 8.5 74 14-93 2-76 (77)
115 1lu4_A Soluble secreted antige 99.6 1.1E-14 3.7E-19 111.0 12.4 86 10-97 23-135 (136)
116 1zzo_A RV1677; thioredoxin fol 99.6 1.8E-14 6.1E-19 109.5 12.9 87 10-98 24-135 (136)
117 3erw_A Sporulation thiol-disul 99.6 1.2E-14 4.2E-19 111.8 11.0 84 10-94 33-145 (145)
118 3qcp_A QSOX from trypanosoma b 99.6 3.5E-16 1.2E-20 144.3 2.5 78 9-86 40-128 (470)
119 2c0g_A ERP29 homolog, windbeut 99.6 8E-15 2.7E-19 125.1 10.7 127 8-152 30-172 (248)
120 2h30_A Thioredoxin, peptide me 99.6 1.3E-14 4.6E-19 114.4 11.0 90 9-98 36-156 (164)
121 2b5e_A Protein disulfide-isome 99.6 2.2E-15 7.7E-20 140.4 7.4 92 8-101 373-470 (504)
122 3raz_A Thioredoxin-related pro 99.6 2.1E-14 7.3E-19 112.2 11.5 91 10-101 23-143 (151)
123 2qc7_A ERP31, ERP28, endoplasm 99.6 1.1E-14 3.9E-19 123.7 10.5 86 8-97 19-118 (240)
124 3eyt_A Uncharacterized protein 99.6 3.1E-14 1.1E-18 111.7 12.2 91 10-100 27-154 (158)
125 3or5_A Thiol:disulfide interch 99.6 4.5E-14 1.5E-18 111.3 12.9 92 10-101 33-154 (165)
126 3lor_A Thiol-disulfide isomera 99.6 3.3E-14 1.1E-18 111.7 11.9 90 10-99 29-156 (160)
127 3ia1_A THIO-disulfide isomeras 99.6 2.9E-14 9.8E-19 111.5 11.4 88 12-101 31-147 (154)
128 2f9s_A Thiol-disulfide oxidore 99.6 3.5E-14 1.2E-18 110.7 11.8 91 10-101 25-141 (151)
129 4evm_A Thioredoxin family prot 99.5 4.4E-14 1.5E-18 107.1 11.4 87 10-96 21-137 (138)
130 2djk_A PDI, protein disulfide- 99.5 2.1E-14 7.3E-19 110.8 8.8 92 8-100 20-117 (133)
131 2lja_A Putative thiol-disulfid 99.5 3.5E-14 1.2E-18 110.6 10.0 92 10-101 29-146 (152)
132 2b1k_A Thiol:disulfide interch 99.5 5.7E-14 1.9E-18 111.6 11.2 88 9-98 49-160 (168)
133 1sen_A Thioredoxin-like protei 99.5 2.2E-15 7.4E-20 120.6 2.4 90 8-98 43-148 (164)
134 3iv4_A Putative oxidoreductase 99.5 2.4E-14 8.2E-19 107.2 7.7 83 9-93 22-111 (112)
135 2l5o_A Putative thioredoxin; s 99.5 8.2E-14 2.8E-18 108.6 11.0 91 10-100 27-143 (153)
136 3gl3_A Putative thiol:disulfid 99.5 1.5E-13 5.3E-18 106.9 11.7 90 10-100 27-144 (152)
137 1kng_A Thiol:disulfide interch 99.5 1.1E-13 3.6E-18 108.2 10.7 87 10-97 41-151 (156)
138 3ph9_A Anterior gradient prote 99.5 1.8E-14 6.2E-19 114.1 6.3 89 8-98 41-145 (151)
139 1z6n_A Hypothetical protein PA 99.5 3.1E-14 1.1E-18 114.5 7.7 83 10-95 53-140 (167)
140 3hcz_A Possible thiol-disulfid 99.5 4E-14 1.4E-18 109.3 7.6 88 10-97 30-145 (148)
141 3fkf_A Thiol-disulfide oxidore 99.5 1.3E-13 4.4E-18 106.5 9.7 86 10-98 32-146 (148)
142 2fgx_A Putative thioredoxin; N 99.5 8.5E-14 2.9E-18 103.8 7.8 76 13-93 30-106 (107)
143 3kh7_A Thiol:disulfide interch 99.5 3.2E-13 1.1E-17 108.7 11.3 87 10-98 57-167 (176)
144 2lrn_A Thiol:disulfide interch 99.5 2.6E-13 8.9E-18 106.1 10.4 87 10-99 28-142 (152)
145 3lwa_A Secreted thiol-disulfid 99.5 3.4E-13 1.2E-17 108.7 11.3 89 10-98 58-181 (183)
146 3kcm_A Thioredoxin family prot 99.5 5.1E-13 1.8E-17 104.1 11.7 91 10-100 27-145 (154)
147 3hdc_A Thioredoxin family prot 99.5 5.6E-13 1.9E-17 104.9 11.6 89 10-99 40-153 (158)
148 3ha9_A Uncharacterized thiored 99.5 4.6E-13 1.6E-17 105.9 10.9 86 10-98 36-164 (165)
149 1ttz_A Conserved hypothetical 99.4 1.2E-13 4.3E-18 99.2 6.7 74 15-97 3-76 (87)
150 3kp9_A Vkorc1/thioredoxin doma 99.4 4.3E-14 1.5E-18 123.1 4.3 75 14-95 200-277 (291)
151 2lrt_A Uncharacterized protein 99.4 8.3E-13 2.8E-17 103.6 10.0 85 10-95 34-145 (152)
152 2ywi_A Hypothetical conserved 99.4 6.8E-13 2.3E-17 107.9 9.8 89 11-100 45-176 (196)
153 3ewl_A Uncharacterized conserv 99.4 5.5E-13 1.9E-17 102.7 8.5 85 10-98 26-141 (142)
154 3eur_A Uncharacterized protein 99.4 9.9E-13 3.4E-17 101.6 9.9 82 10-95 30-142 (142)
155 3ira_A Conserved protein; meth 99.4 1.3E-13 4.4E-18 111.5 5.0 72 8-79 36-120 (173)
156 2cvb_A Probable thiol-disulfid 99.4 2.1E-12 7.1E-17 104.5 11.0 91 10-101 32-162 (188)
157 1jfu_A Thiol:disulfide interch 99.4 4.1E-12 1.4E-16 102.5 12.3 90 10-100 59-182 (186)
158 2hyx_A Protein DIPZ; thioredox 99.4 1.8E-12 6.1E-17 116.0 10.4 87 10-97 81-198 (352)
159 3fw2_A Thiol-disulfide oxidore 99.4 5.2E-12 1.8E-16 98.4 10.9 84 10-97 32-147 (150)
160 3s9f_A Tryparedoxin; thioredox 99.3 3.8E-12 1.3E-16 101.4 9.4 63 10-73 47-136 (165)
161 1wjk_A C330018D20RIK protein; 99.3 4.2E-12 1.5E-16 93.3 8.0 85 6-98 10-96 (100)
162 3u5r_E Uncharacterized protein 99.3 1.5E-11 5.2E-16 102.4 12.2 89 10-101 57-190 (218)
163 2e7p_A Glutaredoxin; thioredox 99.3 7.4E-13 2.5E-17 99.0 3.3 80 11-96 19-106 (116)
164 4fo5_A Thioredoxin-like protei 99.3 8.1E-12 2.8E-16 96.5 9.2 82 10-95 31-142 (143)
165 1i5g_A Tryparedoxin II; electr 99.3 1.1E-11 3.9E-16 95.6 8.8 63 10-73 27-116 (144)
166 1o73_A Tryparedoxin; electron 99.3 1.1E-11 3.9E-16 95.4 8.7 63 10-73 27-116 (144)
167 1o8x_A Tryparedoxin, TRYX, TXN 99.3 1.3E-11 4.3E-16 95.7 8.8 63 10-73 27-116 (146)
168 2ggt_A SCO1 protein homolog, m 99.3 1.9E-11 6.6E-16 96.1 9.4 88 10-98 22-161 (164)
169 2rli_A SCO2 protein homolog, m 99.3 3.2E-11 1.1E-15 95.6 10.8 88 10-98 25-164 (171)
170 3cmi_A Peroxiredoxin HYR1; thi 99.2 1.2E-11 4.2E-16 98.6 7.4 88 10-98 31-168 (171)
171 2dlx_A UBX domain-containing p 99.2 1.4E-11 4.6E-16 97.6 7.0 90 8-98 39-136 (153)
172 2k6v_A Putative cytochrome C o 99.2 3E-11 1E-15 95.7 8.2 86 10-96 34-171 (172)
173 2k8s_A Thioredoxin; dimer, str 99.2 1.1E-11 3.6E-16 86.9 4.6 72 15-89 4-77 (80)
174 1hyu_A AHPF, alkyl hydroperoxi 99.2 4.7E-11 1.6E-15 111.9 10.4 83 10-96 116-198 (521)
175 3drn_A Peroxiredoxin, bacterio 99.2 1.2E-10 4.2E-15 91.9 10.9 86 10-96 27-147 (161)
176 2p5q_A Glutathione peroxidase 99.2 1.8E-11 6.1E-16 96.8 5.7 88 10-98 31-168 (170)
177 2ls5_A Uncharacterized protein 98.8 2E-12 6.7E-17 101.7 0.0 87 10-98 32-148 (159)
178 2vup_A Glutathione peroxidase- 99.2 9.2E-11 3.1E-15 95.3 9.6 88 10-98 47-185 (190)
179 2lus_A Thioredoxion; CR-Trp16, 98.8 2.4E-12 8.3E-17 98.9 0.0 73 10-84 24-128 (143)
180 3dwv_A Glutathione peroxidase- 99.2 3.8E-11 1.3E-15 97.4 6.6 89 10-99 45-184 (187)
181 2v1m_A Glutathione peroxidase; 99.2 1E-10 3.5E-15 92.3 8.8 88 10-98 30-167 (169)
182 1ego_A Glutaredoxin; electron 99.2 5.5E-11 1.9E-15 83.7 6.4 75 15-97 3-83 (85)
183 4f9z_D Endoplasmic reticulum r 99.2 1.7E-11 5.9E-16 102.7 4.4 149 8-171 24-198 (227)
184 1xvw_A Hypothetical protein RV 99.1 2.2E-10 7.5E-15 89.9 10.2 86 10-96 34-158 (160)
185 2bmx_A Alkyl hydroperoxidase C 99.1 1.6E-10 5.4E-15 94.3 9.1 88 10-98 44-170 (195)
186 2p31_A CL683, glutathione pero 99.1 1E-10 3.5E-15 94.3 7.0 87 10-97 48-180 (181)
187 1zof_A Alkyl hydroperoxide-red 99.1 9.5E-11 3.2E-15 95.8 6.8 87 10-97 32-160 (198)
188 1we0_A Alkyl hydroperoxide red 99.1 1.3E-10 4.3E-15 94.1 7.3 88 10-98 30-157 (187)
189 3gyk_A 27KDA outer membrane pr 99.1 3E-10 1E-14 90.8 9.3 84 9-97 20-172 (175)
190 3kij_A Probable glutathione pe 99.1 1.3E-10 4.4E-15 93.6 6.9 87 10-97 37-169 (180)
191 1eej_A Thiol:disulfide interch 99.1 1.1E-10 3.7E-15 97.2 5.7 83 10-97 85-210 (216)
192 2f8a_A Glutathione peroxidase 99.1 2.1E-10 7.1E-15 95.0 7.2 88 10-98 46-207 (208)
193 2obi_A PHGPX, GPX-4, phospholi 99.0 4E-10 1.4E-14 90.8 7.9 86 10-96 46-182 (183)
194 1qmv_A Human thioredoxin perox 99.0 8.9E-10 3E-14 89.9 9.6 87 10-97 33-162 (197)
195 2gs3_A PHGPX, GPX-4, phospholi 99.0 4.7E-10 1.6E-14 90.7 7.0 86 10-96 48-184 (185)
196 1uul_A Tryparedoxin peroxidase 99.0 1.1E-09 3.9E-14 89.7 9.4 87 10-97 35-164 (202)
197 2jsy_A Probable thiol peroxida 99.0 2.4E-09 8.2E-14 84.6 10.6 88 10-97 43-166 (167)
198 1zye_A Thioredoxin-dependent p 99.0 1.5E-09 5.2E-14 90.5 8.9 88 10-97 55-184 (220)
199 2h01_A 2-Cys peroxiredoxin; th 99.0 1.3E-09 4.6E-14 88.4 8.1 88 10-97 30-158 (192)
200 2i81_A 2-Cys peroxiredoxin; st 99.0 2.3E-09 7.7E-14 89.0 9.3 88 10-97 51-179 (213)
201 1xzo_A BSSCO, hypothetical pro 99.0 3.2E-09 1.1E-13 84.1 9.6 88 10-98 32-172 (174)
202 1t3b_A Thiol:disulfide interch 98.9 8.3E-10 2.8E-14 91.6 6.2 82 10-96 85-209 (211)
203 2b7k_A SCO1 protein; metalloch 98.9 1.9E-09 6.6E-14 88.3 7.4 88 10-98 40-179 (200)
204 3ztl_A Thioredoxin peroxidase; 98.9 5.8E-09 2E-13 87.0 10.0 86 10-96 68-196 (222)
205 3h93_A Thiol:disulfide interch 98.9 4.3E-09 1.5E-13 85.4 8.5 88 10-98 24-184 (192)
206 1xvq_A Thiol peroxidase; thior 98.9 8E-09 2.7E-13 82.7 10.0 88 10-98 43-168 (175)
207 1nm3_A Protein HI0572; hybrid, 98.8 1.8E-08 6E-13 84.8 10.6 85 10-94 32-163 (241)
208 1h75_A Glutaredoxin-like prote 98.8 3E-09 1E-13 74.0 4.8 71 15-96 3-76 (81)
209 2hze_A Glutaredoxin-1; thiored 98.8 3.6E-10 1.2E-14 84.7 -0.2 64 11-78 17-87 (114)
210 1kte_A Thioltransferase; redox 98.8 9.7E-10 3.3E-14 80.5 2.0 61 14-78 13-80 (105)
211 3hd5_A Thiol:disulfide interch 98.8 8.2E-09 2.8E-13 83.9 7.6 34 9-42 23-56 (195)
212 3gkn_A Bacterioferritin comigr 98.8 1.6E-08 5.6E-13 79.3 8.9 87 10-96 34-160 (163)
213 1r7h_A NRDH-redoxin; thioredox 98.8 2.3E-08 7.8E-13 68.2 8.2 69 15-94 3-74 (75)
214 2i3y_A Epididymal secretory gl 98.8 1.3E-08 4.6E-13 84.7 8.3 87 10-98 55-211 (215)
215 1v58_A Thiol:disulfide interch 98.8 1.2E-08 4.2E-13 86.2 7.9 87 10-97 96-232 (241)
216 2a4v_A Peroxiredoxin DOT5; yea 98.8 6.7E-08 2.3E-12 75.7 11.4 74 13-86 37-139 (159)
217 2c0d_A Thioredoxin peroxidase 98.7 3E-08 1E-12 82.8 8.7 88 10-97 55-183 (221)
218 1psq_A Probable thiol peroxida 98.7 5.7E-08 1.9E-12 76.6 9.9 86 10-95 41-162 (163)
219 2pn8_A Peroxiredoxin-4; thiore 98.7 4.7E-08 1.6E-12 80.9 9.2 88 10-97 47-176 (211)
220 3h79_A Thioredoxin-like protei 98.7 2E-10 6.7E-15 87.1 -5.0 88 99-207 15-126 (127)
221 2yzh_A Probable thiol peroxida 98.7 5.1E-08 1.8E-12 77.4 8.9 86 10-96 46-170 (171)
222 1n8j_A AHPC, alkyl hydroperoxi 98.7 5.3E-08 1.8E-12 78.8 9.1 89 10-98 29-156 (186)
223 1sji_A Calsequestrin 2, calseq 98.7 3.7E-08 1.3E-12 87.3 8.7 131 10-154 141-275 (350)
224 2r37_A Glutathione peroxidase 98.7 3.2E-08 1.1E-12 81.8 7.6 87 10-98 37-193 (207)
225 4dvc_A Thiol:disulfide interch 98.7 1.4E-07 4.9E-12 75.2 11.0 89 10-99 20-183 (184)
226 4g2e_A Peroxiredoxin; redox pr 98.7 1.1E-08 3.7E-13 80.7 4.2 87 10-96 29-156 (157)
227 3me7_A Putative uncharacterize 98.7 6.7E-08 2.3E-12 77.0 8.5 91 10-100 27-164 (170)
228 3ga4_A Dolichyl-diphosphooligo 98.6 5.4E-10 1.8E-14 90.5 -4.8 79 91-173 10-114 (178)
229 3p7x_A Probable thiol peroxida 98.6 7.9E-08 2.7E-12 76.0 7.9 85 10-95 45-165 (166)
230 3ixr_A Bacterioferritin comigr 98.6 1E-07 3.5E-12 76.6 8.6 88 10-97 50-177 (179)
231 3hz8_A Thiol:disulfide interch 98.6 3.1E-07 1.1E-11 74.8 10.9 33 10-42 23-55 (193)
232 3qpm_A Peroxiredoxin; oxidored 98.6 2E-07 6.7E-12 78.8 9.7 88 10-97 76-205 (240)
233 4gqc_A Thiol peroxidase, perox 98.6 1.6E-08 5.5E-13 80.4 2.6 89 10-98 32-160 (164)
234 1q98_A Thiol peroxidase, TPX; 98.6 1.5E-07 5E-12 74.4 8.1 73 10-82 42-148 (165)
235 3a2v_A Probable peroxiredoxin; 98.6 1.4E-07 4.9E-12 80.2 8.4 88 10-97 32-161 (249)
236 4f9z_D Endoplasmic reticulum r 98.6 7.1E-07 2.4E-11 74.4 12.3 87 12-98 132-225 (227)
237 3l9v_A Putative thiol-disulfid 98.5 1.8E-07 6.2E-12 75.9 7.6 33 10-42 13-48 (189)
238 1tp9_A Peroxiredoxin, PRX D (t 98.5 5E-07 1.7E-11 71.2 9.6 74 10-83 34-146 (162)
239 2cq9_A GLRX2 protein, glutared 98.5 5.3E-08 1.8E-12 74.5 3.6 75 15-96 29-113 (130)
240 2znm_A Thiol:disulfide interch 98.5 6.2E-07 2.1E-11 72.5 9.9 33 10-42 21-53 (195)
241 3us3_A Calsequestrin-1; calciu 98.5 2.1E-07 7.1E-12 83.3 7.1 131 10-154 143-277 (367)
242 3zrd_A Thiol peroxidase; oxido 98.5 5.7E-07 2E-11 73.7 9.1 83 10-92 77-198 (200)
243 3tjj_A Peroxiredoxin-4; thiore 98.5 3.7E-07 1.3E-11 77.8 8.1 88 10-97 90-219 (254)
244 1z6m_A Conserved hypothetical 98.5 7.3E-07 2.5E-11 70.9 9.2 81 10-94 26-174 (175)
245 3ic4_A Glutaredoxin (GRX-1); s 98.5 2.8E-07 9.5E-12 65.6 5.9 72 15-94 14-91 (92)
246 2ht9_A Glutaredoxin-2; thiored 98.4 7.7E-08 2.6E-12 75.3 2.6 57 15-78 51-114 (146)
247 2klx_A Glutaredoxin; thioredox 98.4 4.4E-07 1.5E-11 64.2 6.2 68 14-94 7-77 (89)
248 3feu_A Putative lipoprotein; a 98.4 6.8E-07 2.3E-11 72.3 8.1 86 11-98 22-184 (185)
249 2rem_A Disulfide oxidoreductas 98.4 2.3E-06 8E-11 68.9 11.2 33 10-42 24-56 (193)
250 2wfc_A Peroxiredoxin 5, PRDX5; 98.4 1E-06 3.5E-11 70.1 8.9 74 10-83 30-142 (167)
251 3gv1_A Disulfide interchange p 98.4 1.8E-07 6.2E-12 73.2 4.1 83 9-98 12-139 (147)
252 3uma_A Hypothetical peroxiredo 98.4 1.2E-06 4.2E-11 70.9 8.7 74 10-83 55-167 (184)
253 3c1r_A Glutaredoxin-1; oxidize 98.4 3.9E-07 1.3E-11 68.5 5.0 60 15-78 27-94 (118)
254 2pwj_A Mitochondrial peroxired 98.3 1.1E-06 3.8E-11 70.1 7.8 72 12-83 45-154 (171)
255 3mng_A Peroxiredoxin-5, mitoch 98.3 1.7E-06 5.9E-11 69.4 8.5 85 10-94 42-171 (173)
256 2lqo_A Putative glutaredoxin R 98.3 3.7E-06 1.3E-10 60.5 9.1 77 14-100 5-86 (92)
257 2l4c_A Endoplasmic reticulum r 98.3 5.5E-06 1.9E-10 62.8 10.3 80 9-96 37-122 (124)
258 3zzx_A Thioredoxin; oxidoreduc 98.3 8.9E-09 3E-13 76.0 -5.7 44 126-173 26-84 (105)
259 1fov_A Glutaredoxin 3, GRX3; a 98.3 2E-06 6.8E-11 59.4 6.8 68 15-95 3-74 (82)
260 3qmx_A Glutaredoxin A, glutare 98.3 4.4E-06 1.5E-10 60.7 8.7 62 9-77 12-78 (99)
261 2dml_A Protein disulfide-isome 98.3 2.7E-08 9.3E-13 75.0 -3.4 66 101-173 19-100 (130)
262 1prx_A HORF6; peroxiredoxin, h 98.3 5.2E-06 1.8E-10 69.2 10.3 85 13-97 34-168 (224)
263 3msz_A Glutaredoxin 1; alpha-b 98.3 1.5E-06 5E-11 61.0 5.8 75 13-98 4-87 (89)
264 2h8l_A Protein disulfide-isome 98.3 1.1E-05 3.9E-10 68.0 12.3 98 8-112 21-127 (252)
265 3ed3_A Protein disulfide-isome 98.2 9.9E-09 3.4E-13 89.5 -7.0 103 100-209 18-142 (298)
266 1un2_A DSBA, thiol-disulfide i 98.2 4.5E-07 1.6E-11 74.3 3.4 45 9-53 111-158 (197)
267 3nzn_A Glutaredoxin; structura 98.2 2.4E-06 8.4E-11 62.3 6.5 76 11-93 20-101 (103)
268 2v2g_A Peroxiredoxin 6; oxidor 98.2 1.5E-06 5.3E-11 73.0 6.0 87 11-97 29-164 (233)
269 3l9s_A Thiol:disulfide interch 98.2 2.4E-06 8.3E-11 69.5 7.0 33 10-42 20-55 (191)
270 4hde_A SCO1/SENC family lipopr 98.2 3.5E-06 1.2E-10 67.0 7.4 88 10-97 31-169 (170)
271 1xcc_A 1-Cys peroxiredoxin; un 98.2 4.3E-06 1.5E-10 69.5 7.5 85 13-97 34-165 (220)
272 2yan_A Glutaredoxin-3; oxidore 98.1 5E-06 1.7E-10 60.8 6.0 56 15-77 19-83 (105)
273 2voc_A Thioredoxin; electron t 98.1 1.2E-07 4.1E-12 69.8 -3.3 85 101-209 3-105 (112)
274 3keb_A Probable thiol peroxida 98.1 1.9E-05 6.5E-10 65.9 9.5 86 10-98 47-176 (224)
275 1hyu_A AHPF, alkyl hydroperoxi 98.0 3.2E-06 1.1E-10 79.0 4.6 141 10-168 17-176 (521)
276 2khp_A Glutaredoxin; thioredox 98.0 8.3E-06 2.8E-10 57.7 5.7 56 14-76 7-66 (92)
277 3rhb_A ATGRXC5, glutaredoxin-C 98.0 6.1E-06 2.1E-10 61.0 4.8 60 15-78 21-85 (113)
278 2c0g_A ERP29 homolog, windbeut 98.0 2.4E-07 8.2E-12 78.7 -3.8 91 100-216 17-139 (248)
279 2djj_A PDI, protein disulfide- 98.0 2.7E-07 9.1E-12 68.5 -3.3 86 101-208 9-116 (121)
280 1x5e_A Thioredoxin domain cont 98.0 1.4E-07 4.8E-12 70.8 -4.9 82 101-208 9-109 (126)
281 3qou_A Protein YBBN; thioredox 97.9 6.4E-07 2.2E-11 76.8 -2.1 67 100-173 8-91 (287)
282 2ec4_A FAS-associated factor 1 97.9 6.8E-05 2.3E-09 60.4 9.6 90 8-97 52-167 (178)
283 1x5d_A Protein disulfide-isome 97.9 2.1E-07 7.1E-12 70.2 -5.0 66 101-173 9-94 (133)
284 2yj7_A LPBCA thioredoxin; oxid 97.1 1.7E-06 5.8E-11 61.9 0.0 65 102-173 4-84 (106)
285 2qsi_A Putative hydrogenase ex 97.9 5E-07 1.7E-11 69.8 -3.3 64 103-173 19-100 (137)
286 3ec3_A Protein disulfide-isome 97.9 4.7E-05 1.6E-09 64.2 8.5 98 9-113 22-130 (250)
287 2l5l_A Thioredoxin; structural 97.8 9E-08 3.1E-12 73.1 -7.9 70 127-216 45-133 (136)
288 3q6o_A Sulfhydryl oxidase 1; p 97.8 3.5E-07 1.2E-11 76.8 -5.5 66 101-173 14-100 (244)
289 3uvt_A Thioredoxin domain-cont 97.8 9.7E-08 3.3E-12 69.5 -7.9 66 99-173 5-89 (111)
290 3gha_A Disulfide bond formatio 97.8 0.00017 5.7E-09 59.0 10.7 41 56-100 154-194 (202)
291 2dj1_A Protein disulfide-isome 97.8 3.2E-07 1.1E-11 69.9 -5.5 83 102-208 20-123 (140)
292 3hxs_A Thioredoxin, TRXP; elec 97.8 3.1E-07 1.1E-11 70.1 -5.6 43 127-173 58-116 (141)
293 2qc7_A ERP31, ERP28, endoplasm 97.8 6E-07 2E-11 75.9 -4.4 86 100-208 6-118 (240)
294 2i1u_A Thioredoxin, TRX, MPT46 97.8 5.2E-07 1.8E-11 66.8 -4.4 67 100-173 13-95 (121)
295 3ul3_B Thioredoxin, thioredoxi 97.8 1.4E-06 4.6E-11 65.7 -2.4 44 126-173 48-107 (128)
296 3ctg_A Glutaredoxin-2; reduced 97.8 6.7E-06 2.3E-10 62.7 1.5 59 15-77 39-105 (129)
297 2es7_A Q8ZP25_salty, putative 97.7 9.9E-07 3.4E-11 68.5 -3.7 68 100-173 18-102 (142)
298 2qgv_A Hydrogenase-1 operon pr 97.7 5.3E-07 1.8E-11 69.9 -5.2 65 101-173 19-102 (140)
299 3die_A Thioredoxin, TRX; elect 97.7 1.3E-06 4.3E-11 62.9 -3.0 66 99-173 3-84 (106)
300 1thx_A Thioredoxin, thioredoxi 97.7 1.5E-06 5E-11 63.5 -2.7 69 98-173 6-90 (115)
301 2dj3_A Protein disulfide-isome 97.7 1.6E-06 5.6E-11 65.3 -2.5 66 101-173 9-92 (133)
302 4euy_A Uncharacterized protein 97.7 1.3E-06 4.5E-11 63.3 -3.0 61 105-173 7-82 (105)
303 3gnj_A Thioredoxin domain prot 97.7 5.1E-07 1.8E-11 65.7 -5.3 66 101-173 6-87 (111)
304 3f4s_A Alpha-DSBA1, putative u 97.7 0.00032 1.1E-08 58.5 11.2 45 56-100 161-213 (226)
305 3evi_A Phosducin-like protein 97.7 5.4E-07 1.9E-11 67.8 -5.3 65 102-173 6-84 (118)
306 2trx_A Thioredoxin; electron t 97.7 1.4E-06 4.7E-11 63.1 -3.3 66 101-173 4-85 (108)
307 1mek_A Protein disulfide isome 97.7 3.9E-07 1.3E-11 67.0 -6.4 86 102-208 10-116 (120)
308 3tco_A Thioredoxin (TRXA-1); d 97.7 3.7E-07 1.3E-11 66.0 -6.7 66 100-173 5-86 (109)
309 3aps_A DNAJ homolog subfamily 97.7 9.1E-07 3.1E-11 65.7 -4.6 66 101-173 5-86 (122)
310 2ppt_A Thioredoxin-2; thiredox 97.7 3.3E-07 1.1E-11 72.0 -7.5 43 127-173 71-129 (155)
311 1oaz_A Thioredoxin 1; immune s 97.7 6.1E-07 2.1E-11 67.6 -5.7 85 101-207 5-121 (123)
312 2i4a_A Thioredoxin; acidophIle 97.7 2E-06 7E-11 61.9 -2.8 66 101-173 4-85 (107)
313 1t00_A Thioredoxin, TRX; redox 97.6 1.7E-06 5.8E-11 63.1 -3.3 66 101-173 7-88 (112)
314 2lst_A Thioredoxin; structural 96.8 7.1E-06 2.4E-10 61.5 0.0 41 126-170 25-86 (130)
315 4eo3_A Bacterioferritin comigr 97.6 0.00017 5.6E-09 63.4 8.8 86 10-97 23-138 (322)
316 3hz4_A Thioredoxin; NYSGXRC, P 97.6 1E-06 3.6E-11 67.5 -4.9 66 101-173 8-89 (140)
317 3h8q_A Thioredoxin reductase 3 97.6 0.00011 3.7E-09 54.5 6.0 56 15-77 19-81 (114)
318 1w4v_A Thioredoxin, mitochondr 97.6 3.3E-07 1.1E-11 68.2 -8.0 64 103-173 17-96 (119)
319 3p2a_A Thioredoxin 2, putative 97.6 3.1E-06 1.1E-10 65.2 -2.7 66 100-173 39-120 (148)
320 1fb6_A Thioredoxin M; electron 97.6 2.5E-06 8.5E-11 61.2 -3.1 65 102-173 3-83 (105)
321 2dj0_A Thioredoxin-related tra 97.6 2.8E-06 9.5E-11 64.7 -3.1 66 101-173 9-98 (137)
322 1nsw_A Thioredoxin, TRX; therm 97.6 1E-06 3.6E-11 63.4 -5.3 63 103-173 4-82 (105)
323 2pu9_C TRX-F, thioredoxin F-ty 97.6 1.4E-06 4.9E-11 63.6 -4.7 66 101-173 7-89 (111)
324 1dby_A Chloroplast thioredoxin 97.6 1.3E-06 4.4E-11 63.1 -4.9 64 103-173 5-84 (107)
325 3dxb_A Thioredoxin N-terminall 97.5 3.1E-06 1E-10 70.2 -3.9 66 101-173 14-95 (222)
326 2o8v_B Thioredoxin 1; disulfid 97.5 2.4E-06 8.2E-11 64.6 -4.2 66 101-173 24-105 (128)
327 1gh2_A Thioredoxin-like protei 97.5 1.6E-06 5.5E-11 62.9 -5.2 43 127-173 28-85 (107)
328 3qfa_C Thioredoxin; protein-pr 97.5 6E-07 2.1E-11 66.6 -7.6 43 127-173 38-95 (116)
329 3sbc_A Peroxiredoxin TSA1; alp 97.5 0.00035 1.2E-08 57.8 8.2 87 10-96 51-179 (216)
330 1v98_A Thioredoxin; oxidoreduc 97.5 4.8E-06 1.6E-10 63.6 -3.2 65 101-173 35-115 (140)
331 3bj5_A Protein disulfide-isome 97.4 0.0015 5.3E-08 50.5 11.0 91 11-101 31-130 (147)
332 3d6i_A Monothiol glutaredoxin- 97.4 1.9E-06 6.5E-11 62.9 -5.5 43 127-173 28-87 (112)
333 2yzu_A Thioredoxin; redox prot 97.4 1.3E-06 4.6E-11 62.9 -6.4 65 101-173 3-83 (109)
334 2l57_A Uncharacterized protein 97.4 6.6E-06 2.3E-10 61.4 -2.8 67 127-212 33-120 (126)
335 1un2_A DSBA, thiol-disulfide i 97.4 6.4E-05 2.2E-09 61.4 2.4 91 55-153 40-145 (197)
336 2av4_A Thioredoxin-like protei 97.4 5.6E-06 1.9E-10 65.3 -3.8 44 126-173 47-106 (160)
337 3kp8_A Vkorc1/thioredoxin doma 97.4 2E-06 6.7E-11 63.3 -6.2 39 126-168 18-72 (106)
338 1faa_A Thioredoxin F; electron 97.3 3.5E-06 1.2E-10 62.7 -5.1 67 100-173 19-102 (124)
339 1wik_A Thioredoxin-like protei 97.3 0.00034 1.2E-08 51.2 5.9 56 15-77 17-81 (109)
340 4f82_A Thioredoxin reductase; 97.3 0.00058 2E-08 54.7 7.5 72 11-82 47-157 (176)
341 2l6c_A Thioredoxin; oxidoreduc 97.3 7E-06 2.4E-10 60.1 -3.9 43 127-173 26-83 (110)
342 1wmj_A Thioredoxin H-type; str 97.3 3.9E-06 1.3E-10 62.7 -5.4 43 127-173 43-100 (130)
343 2r2j_A Thioredoxin domain-cont 97.3 0.0014 4.6E-08 58.5 10.1 93 9-101 234-332 (382)
344 1r26_A Thioredoxin; redox-acti 97.3 3.1E-06 1.1E-10 63.8 -6.2 43 127-173 44-101 (125)
345 2dbc_A PDCL2, unnamed protein 97.2 1.8E-06 6.1E-11 66.0 -8.1 44 126-173 36-91 (135)
346 1zma_A Bacterocin transport ac 97.2 2.4E-05 8.2E-10 57.7 -1.6 44 126-173 35-98 (118)
347 3bci_A Disulfide bond protein 97.2 0.0029 9.9E-08 50.3 10.5 37 57-97 141-177 (186)
348 2kuc_A Putative disulphide-iso 97.2 3.6E-06 1.2E-10 63.1 -6.5 65 102-173 9-98 (130)
349 2vlu_A Thioredoxin, thioredoxi 97.2 6.9E-06 2.4E-10 60.8 -5.0 43 127-173 41-98 (122)
350 2axo_A Hypothetical protein AT 97.2 0.0031 1.1E-07 53.8 10.9 81 13-98 44-143 (270)
351 2e0q_A Thioredoxin; electron t 97.2 6.1E-06 2.1E-10 58.7 -5.1 63 103-173 3-80 (104)
352 3f3q_A Thioredoxin-1; His TAG, 97.2 1.5E-05 5.1E-10 58.2 -3.2 43 127-173 31-88 (109)
353 3t58_A Sulfhydryl oxidase 1; o 97.2 2.1E-05 7.3E-10 73.5 -3.1 66 101-173 14-100 (519)
354 3gix_A Thioredoxin-like protei 97.1 1.5E-05 5.1E-10 62.0 -3.9 44 126-173 29-88 (149)
355 3gmf_A Protein-disulfide isome 97.1 0.0051 1.7E-07 50.3 11.2 38 57-98 159-197 (205)
356 2wz9_A Glutaredoxin-3; protein 97.1 1.1E-05 3.7E-10 62.7 -4.8 43 127-173 39-96 (153)
357 3apq_A DNAJ homolog subfamily 97.1 1.4E-05 4.9E-10 65.4 -4.5 44 126-173 120-179 (210)
358 2xc2_A Thioredoxinn; oxidoredu 97.1 3.8E-06 1.3E-10 61.9 -7.3 43 127-173 40-96 (117)
359 1qgv_A Spliceosomal protein U5 97.1 1.4E-05 4.9E-10 61.6 -4.3 44 126-173 29-88 (142)
360 3m9j_A Thioredoxin; oxidoreduc 97.1 2.6E-05 9E-10 55.7 -2.8 42 128-173 28-84 (105)
361 1ep7_A Thioredoxin CH1, H-type 97.0 4.4E-05 1.5E-09 55.3 -2.1 42 128-173 32-89 (112)
362 3l4n_A Monothiol glutaredoxin- 97.0 0.00055 1.9E-08 51.9 4.0 61 15-76 16-80 (127)
363 3qcp_A QSOX from trypanosoma b 97.0 3.4E-05 1.2E-09 71.1 -3.6 66 101-173 25-115 (470)
364 1a0r_P Phosducin, MEKA, PP33; 96.9 2.8E-05 9.6E-10 65.8 -4.2 44 126-173 139-196 (245)
365 2h8l_A Protein disulfide-isome 96.9 0.0029 9.8E-08 53.0 7.8 90 11-100 129-232 (252)
366 1nm3_A Protein HI0572; hybrid, 96.9 0.0011 3.9E-08 55.0 5.2 72 12-93 169-240 (241)
367 2oe3_A Thioredoxin-3; electron 96.8 5.1E-05 1.7E-09 55.9 -3.1 43 127-173 37-94 (114)
368 1ilo_A Conserved hypothetical 96.8 0.00019 6.3E-09 48.4 -0.1 40 128-173 7-59 (77)
369 1xwb_A Thioredoxin; dimerizati 96.7 7.3E-05 2.5E-09 53.4 -2.7 43 127-173 27-85 (106)
370 1xfl_A Thioredoxin H1; AT3G510 96.7 6.2E-05 2.1E-09 56.3 -3.2 43 127-173 45-102 (124)
371 3tue_A Tryparedoxin peroxidase 96.7 0.0033 1.1E-07 52.1 6.9 87 10-96 55-183 (219)
372 1syr_A Thioredoxin; SGPP, stru 96.7 6.5E-05 2.2E-09 54.7 -3.2 43 127-173 33-90 (112)
373 3kzq_A Putative uncharacterize 96.7 0.021 7.1E-07 46.2 11.5 43 56-98 160-203 (208)
374 2trc_P Phosducin, MEKA, PP33; 96.7 5.7E-05 2E-09 62.6 -4.1 44 126-173 126-183 (217)
375 1ti3_A Thioredoxin H, PTTRXH1; 96.7 0.00013 4.6E-09 52.6 -1.6 42 128-173 34-90 (113)
376 3d22_A TRXH4, thioredoxin H-ty 96.7 7.3E-05 2.5E-09 56.6 -3.3 43 127-173 53-110 (139)
377 2j23_A Thioredoxin; immune pro 96.6 0.00014 4.8E-09 53.9 -2.0 42 128-173 41-99 (121)
378 1xiy_A Peroxiredoxin, pfaop; a 96.6 0.018 6.1E-07 46.1 10.2 86 10-95 42-179 (182)
379 1nho_A Probable thioredoxin; b 96.6 0.00023 7.9E-09 48.6 -0.9 41 127-173 8-64 (85)
380 3emx_A Thioredoxin; structural 96.6 6.6E-05 2.3E-09 56.9 -4.1 43 127-173 38-103 (135)
381 2vm1_A Thioredoxin, thioredoxi 96.6 0.00011 3.8E-09 53.5 -2.9 42 128-173 36-92 (118)
382 1aba_A Glutaredoxin; electron 96.5 0.0079 2.7E-07 41.7 6.8 55 15-75 2-74 (87)
383 2vim_A Thioredoxin, TRX; thior 96.5 0.00012 4.2E-09 51.9 -2.9 42 128-173 27-83 (104)
384 2wci_A Glutaredoxin-4; redox-a 96.5 0.0032 1.1E-07 48.1 4.9 50 21-77 48-101 (135)
385 2f51_A Thioredoxin; electron t 96.4 0.00011 3.7E-09 54.4 -3.6 41 127-171 30-85 (118)
386 3cxg_A Putative thioredoxin; m 96.4 5.1E-05 1.7E-09 57.5 -5.5 41 126-170 46-100 (133)
387 3ec3_A Protein disulfide-isome 96.4 0.032 1.1E-06 46.6 11.4 90 11-101 132-231 (250)
388 1t1v_A SH3BGRL3, SH3 domain-bi 96.4 0.0058 2E-07 43.1 5.4 56 15-77 4-71 (93)
389 1fo5_A Thioredoxin; disulfide 96.3 0.00023 7.9E-09 48.6 -2.5 40 128-173 10-65 (85)
390 3kp9_A Vkorc1/thioredoxin doma 96.2 8.2E-05 2.8E-09 64.5 -6.0 38 126-167 203-256 (291)
391 3fk8_A Disulphide isomerase; A 96.0 0.00039 1.3E-08 52.0 -2.5 43 127-173 36-103 (133)
392 2ct6_A SH3 domain-binding glut 96.0 0.011 3.6E-07 43.4 5.4 57 14-77 9-83 (111)
393 3zyw_A Glutaredoxin-3; metal b 96.0 0.011 3.8E-07 43.4 5.4 67 15-94 18-93 (111)
394 3c7m_A Thiol:disulfide interch 95.9 0.012 4.3E-07 46.5 5.7 40 10-49 16-56 (195)
395 3f9u_A Putative exported cytoc 95.7 0.00014 4.9E-09 57.1 -6.5 19 155-173 123-142 (172)
396 2fwh_A Thiol:disulfide interch 95.6 0.0005 1.7E-08 51.8 -3.3 43 127-173 38-103 (134)
397 2wem_A Glutaredoxin-related pr 95.6 0.026 8.7E-07 41.9 6.2 51 21-77 33-87 (118)
398 2jad_A Yellow fluorescent prot 95.6 0.0047 1.6E-07 54.8 2.3 61 15-76 263-328 (362)
399 1t4y_A Adaptive-response senso 95.4 0.39 1.3E-05 34.6 11.4 84 14-97 13-98 (105)
400 3ipz_A Monothiol glutaredoxin- 95.4 0.027 9.2E-07 41.0 5.4 50 21-77 31-84 (109)
401 3gx8_A Monothiol glutaredoxin- 95.1 0.0068 2.3E-07 45.2 1.5 53 21-77 29-85 (121)
402 1wou_A Thioredoxin -related pr 95.1 0.00077 2.7E-08 50.0 -3.9 39 132-172 41-102 (123)
403 1z6n_A Hypothetical protein PA 95.0 0.00072 2.5E-08 53.6 -4.4 43 126-172 60-120 (167)
404 2in3_A Hypothetical protein; D 95.0 0.04 1.4E-06 44.4 6.0 43 56-98 167-210 (216)
405 3ph9_A Anterior gradient prote 94.4 0.0013 4.3E-08 51.3 -4.3 44 126-173 50-112 (151)
406 1sen_A Thioredoxin-like protei 94.2 0.0014 5E-08 51.3 -4.5 44 126-173 52-115 (164)
407 2ju5_A Thioredoxin disulfide i 93.8 0.0035 1.2E-07 48.4 -2.9 44 126-173 53-128 (154)
408 3tdg_A DSBG, putative uncharac 93.7 0.051 1.7E-06 46.4 4.0 31 9-39 145-175 (273)
409 3gn3_A Putative protein-disulf 93.6 0.084 2.9E-06 42.0 4.9 42 9-50 12-54 (182)
410 2e7p_A Glutaredoxin; thioredox 93.2 0.0033 1.1E-07 45.6 -3.8 41 127-173 25-82 (116)
411 2fgx_A Putative thioredoxin; N 92.5 0.0095 3.3E-07 43.6 -2.1 39 132-173 38-90 (107)
412 2lus_A Thioredoxion; CR-Trp16, 91.5 0.025 8.5E-07 42.0 0.0 24 126-153 32-55 (143)
413 1ttz_A Conserved hypothetical 92.1 0.0045 1.5E-07 43.5 -4.1 38 132-173 9-57 (87)
414 2xhf_A Peroxiredoxin 5; oxidor 91.9 0.037 1.3E-06 43.8 0.6 54 10-63 41-100 (171)
415 3dml_A Putative uncharacterize 91.4 0.0018 6E-08 48.3 -7.3 44 126-173 24-87 (116)
416 3ira_A Conserved protein; meth 91.0 0.0085 2.9E-07 47.7 -4.1 44 126-173 45-116 (173)
417 3iv4_A Putative oxidoreductase 90.7 0.023 8E-07 41.9 -1.6 40 132-173 34-92 (112)
418 2k8s_A Thioredoxin; dimer, str 90.5 0.0092 3.1E-07 40.5 -3.8 35 132-168 10-61 (80)
419 2x8g_A Thioredoxin glutathione 90.4 0.16 5.4E-06 47.6 3.4 60 15-78 20-83 (598)
420 3c7m_A Thiol:disulfide interch 90.4 0.13 4.6E-06 40.4 2.5 43 55-98 152-194 (195)
421 3gn3_A Putative protein-disulf 90.2 0.16 5.6E-06 40.3 2.8 37 56-93 145-181 (182)
422 1u6t_A SH3 domain-binding glut 89.5 0.73 2.5E-05 34.2 5.7 56 14-76 1-74 (121)
423 2wul_A Glutaredoxin related pr 89.4 0.83 2.8E-05 33.7 6.0 51 21-77 33-87 (118)
424 1ego_A Glutaredoxin; electron 88.7 0.059 2E-06 36.4 -0.7 33 132-166 9-62 (85)
425 2h30_A Thioredoxin, peptide me 88.7 0.012 4.2E-07 44.9 -4.8 23 126-152 44-66 (164)
426 2ls5_A Uncharacterized protein 87.4 0.11 3.6E-06 39.5 0.0 19 126-148 39-57 (159)
427 2imf_A HCCA isomerase, 2-hydro 85.7 0.84 2.9E-05 36.3 4.5 39 56-98 158-196 (203)
428 3raz_A Thioredoxin-related pro 85.6 0.027 9.1E-07 42.6 -4.4 24 126-153 30-53 (151)
429 2djk_A PDI, protein disulfide- 84.7 0.046 1.6E-06 40.8 -3.4 39 128-171 31-87 (133)
430 3gl5_A Putative DSBA oxidoredu 84.3 1.6 5.5E-05 35.9 5.7 41 56-99 174-214 (239)
431 1rw1_A Conserved hypothetical 83.4 0.84 2.9E-05 33.1 3.2 21 15-35 2-22 (114)
432 3or5_A Thiol:disulfide interch 82.7 0.085 2.9E-06 40.0 -2.7 23 127-153 41-63 (165)
433 2lrt_A Uncharacterized protein 82.3 0.099 3.4E-06 39.7 -2.4 24 126-153 41-64 (152)
434 1z3e_A Regulatory protein SPX; 81.9 1 3.5E-05 33.6 3.2 22 15-36 3-24 (132)
435 2kok_A Arsenate reductase; bru 81.4 1.1 3.8E-05 32.8 3.2 22 15-36 7-28 (120)
436 3fz5_A Possible 2-hydroxychrom 81.0 1.5 5.1E-05 34.9 4.1 36 56-95 164-199 (202)
437 2dlx_A UBX domain-containing p 79.5 0.13 4.6E-06 39.8 -2.6 40 132-171 52-110 (153)
438 3l78_A Regulatory protein SPX; 78.8 1.5 5.2E-05 32.1 3.2 76 15-96 2-86 (120)
439 3kcm_A Thioredoxin family prot 77.7 0.14 4.7E-06 38.4 -3.0 23 127-153 35-57 (154)
440 1wwj_A Circadian clock protein 76.2 1 3.5E-05 32.5 1.5 61 11-71 6-67 (105)
441 3fz4_A Putative arsenate reduc 75.0 2.2 7.6E-05 31.3 3.2 22 15-36 5-26 (120)
442 2in3_A Hypothetical protein; D 73.1 5.6 0.00019 31.4 5.4 29 13-41 8-36 (216)
443 3gkx_A Putative ARSC family re 71.5 2.4 8.3E-05 31.0 2.7 21 15-35 6-26 (120)
444 3rpp_A Glutathione S-transfera 71.4 5.7 0.0002 32.4 5.2 40 56-96 173-213 (234)
445 3fkf_A Thiol-disulfide oxidore 69.4 1.1 3.8E-05 32.7 0.4 24 126-153 39-62 (148)
446 3hcz_A Possible thiol-disulfid 67.6 2.6 9E-05 30.6 2.1 25 126-154 37-61 (148)
447 3eur_A Uncharacterized protein 67.3 1.2 4.2E-05 32.6 0.2 25 126-154 37-64 (142)
448 1r4w_A Glutathione S-transfera 66.9 11 0.00039 30.1 6.1 39 56-95 173-212 (226)
449 2g2q_A Glutaredoxin-2; thiored 66.0 3.2 0.00011 30.5 2.2 30 12-41 2-31 (124)
450 1i5g_A Tryparedoxin II; electr 65.5 1.2 4.2E-05 32.7 -0.1 25 126-154 34-58 (144)
451 1s3c_A Arsenate reductase; ARS 65.5 3.3 0.00011 31.3 2.3 76 15-96 4-88 (141)
452 3rdw_A Putative arsenate reduc 65.1 2.8 9.5E-05 30.8 1.8 21 15-35 7-27 (121)
453 1o8x_A Tryparedoxin, TRYX, TXN 65.0 1.3 4.3E-05 32.7 -0.1 25 126-154 34-58 (146)
454 2lrn_A Thiol:disulfide interch 63.4 2.5 8.5E-05 31.3 1.3 25 126-154 35-59 (152)
455 1s3a_A NADH-ubiquinone oxidore 63.3 36 0.0012 23.9 8.2 73 14-98 21-99 (102)
456 1o73_A Tryparedoxin; electron 62.9 2.1 7.1E-05 31.3 0.7 25 126-154 34-58 (144)
457 3f0i_A Arsenate reductase; str 62.8 4 0.00014 29.8 2.3 21 15-35 6-26 (119)
458 3s9f_A Tryparedoxin; thioredox 61.8 1.6 5.4E-05 33.3 -0.1 25 126-154 54-78 (165)
459 2l5o_A Putative thioredoxin; s 61.0 2.5 8.4E-05 31.1 0.9 23 127-153 35-57 (153)
460 3ir4_A Glutaredoxin 2; glutath 60.5 23 0.00079 27.6 6.7 75 15-99 4-78 (218)
461 2b5x_A YKUV protein, TRXY; thi 60.1 2.4 8.2E-05 30.8 0.6 23 127-153 36-58 (148)
462 3erw_A Sporulation thiol-disul 59.8 1.3 4.6E-05 32.1 -0.9 24 126-153 40-63 (145)
463 2imf_A HCCA isomerase, 2-hydro 59.6 9.3 0.00032 30.0 4.1 28 14-41 2-29 (203)
464 3ha9_A Uncharacterized thiored 58.5 2.5 8.5E-05 31.7 0.5 23 127-153 44-66 (165)
465 1lu4_A Soluble secreted antige 57.5 2.1 7.1E-05 30.7 -0.1 23 127-153 31-53 (136)
466 2lja_A Putative thiol-disulfid 55.4 3.6 0.00012 30.2 0.9 23 127-153 37-59 (152)
467 2f9s_A Thiol-disulfide oxidore 55.3 2.4 8.1E-05 31.3 -0.1 23 127-153 33-55 (151)
468 3gl3_A Putative thiol:disulfid 54.2 3.4 0.00011 30.3 0.6 23 127-153 35-57 (152)
469 3lwa_A Secreted thiol-disulfid 53.7 2.6 8.9E-05 32.3 -0.1 26 126-155 65-90 (183)
470 3lyk_A Stringent starvation pr 53.2 41 0.0014 26.1 7.0 75 13-98 5-80 (216)
471 3lor_A Thiol-disulfide isomera 52.8 2.1 7.1E-05 31.8 -0.8 25 126-154 36-61 (160)
472 1kng_A Thiol:disulfide interch 52.5 3.2 0.00011 30.5 0.2 22 126-151 48-69 (156)
473 3ia1_A THIO-disulfide isomeras 51.8 2.9 0.0001 30.8 -0.1 24 126-153 36-59 (154)
474 3ktb_A Arsenical resistance op 51.3 64 0.0022 23.0 7.1 36 56-93 66-101 (106)
475 2b1k_A Thiol:disulfide interch 51.2 2.6 9E-05 31.7 -0.5 21 127-151 58-78 (168)
476 2p31_A CL683, glutathione pero 51.0 5.4 0.00019 30.6 1.4 26 126-155 55-80 (181)
477 4g9p_A 4-hydroxy-3-methylbut-2 50.5 34 0.0012 30.5 6.5 55 43-97 335-398 (406)
478 4glt_A Glutathione S-transfera 50.5 23 0.00078 28.0 5.1 75 15-98 23-97 (225)
479 2ahe_A Chloride intracellular 50.4 60 0.0021 26.4 7.9 78 12-99 16-101 (267)
480 2r4v_A XAP121, chloride intrac 50.2 44 0.0015 26.7 7.0 70 19-99 26-96 (247)
481 4dej_A Glutathione S-transfera 49.8 47 0.0016 26.3 7.0 77 11-98 9-87 (231)
482 4hoj_A REGF protein; GST, glut 49.0 65 0.0022 24.7 7.6 74 15-98 4-77 (210)
483 2p5q_A Glutathione peroxidase 48.9 6.2 0.00021 29.4 1.4 26 126-155 38-63 (170)
484 2v1m_A Glutathione peroxidase; 48.7 6.3 0.00021 29.4 1.4 26 126-155 37-62 (169)
485 3kij_A Probable glutathione pe 47.8 8.8 0.0003 29.3 2.1 26 126-155 44-69 (180)
486 3kgk_A Arsenical resistance op 47.5 76 0.0026 22.8 8.1 37 56-94 63-99 (110)
487 2f8a_A Glutathione peroxidase 46.3 7 0.00024 31.1 1.4 27 126-156 53-79 (208)
488 3hdc_A Thioredoxin family prot 45.5 3.2 0.00011 31.0 -0.8 23 127-153 48-70 (158)
489 3dwv_A Glutathione peroxidase- 45.2 6.9 0.00023 30.2 1.1 27 126-156 52-78 (187)
490 1r4w_A Glutathione S-transfera 43.6 17 0.00059 29.0 3.4 28 13-40 6-33 (226)
491 1k0m_A CLIC1, NCC27, chloride 43.6 94 0.0032 24.6 7.9 78 12-99 5-90 (241)
492 3ubk_A Glutathione transferase 42.9 41 0.0014 26.7 5.6 74 15-99 4-77 (242)
493 4iel_A Glutathione S-transfera 42.8 31 0.001 27.2 4.8 78 14-99 23-101 (229)
494 2obi_A PHGPX, GPX-4, phospholi 41.7 9.3 0.00032 29.2 1.4 26 126-155 53-78 (183)
495 2ywi_A Hypothetical conserved 41.6 6 0.0002 30.5 0.2 25 126-154 52-76 (196)
496 2vup_A Glutathione peroxidase- 41.5 9.3 0.00032 29.5 1.4 26 126-155 54-79 (190)
497 3cmi_A Peroxiredoxin HYR1; thi 40.2 8.7 0.0003 29.0 1.0 25 126-155 38-62 (171)
498 3hz8_A Thiol:disulfide interch 39.4 4.5 0.00015 31.8 -0.9 20 132-153 34-53 (193)
499 1yy7_A SSPA, stringent starvat 39.3 1.3E+02 0.0043 23.0 7.9 74 14-98 10-84 (213)
500 3fw2_A Thiol-disulfide oxidore 38.9 11 0.00037 27.5 1.3 24 126-153 39-64 (150)
No 1
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.95 E-value=4.7e-29 Score=210.45 Aligned_cols=176 Identities=24% Similarity=0.372 Sum_probs=142.2
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCC---CEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCC
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI---PHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSR 84 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~---~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~ 84 (250)
..+++++|+|||+||++|+++.|.|+++++.+++. ..+..+|++.+++++++|+|+++||+++| +|+.+ +|.|.+
T Consensus 30 ~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~-~~~g~~ 108 (241)
T 3idv_A 30 ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIKILKKGQAV-DYEGSR 108 (241)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE-ECCSCS
T ss_pred hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEEEEEcCCCcc-cccCcc
Confidence 46789999999999999999999999999998764 66677789999999999999999999999 56554 799999
Q ss_pred CHHHHHHHHHHhhCCC-------CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH---
Q 025648 85 TLDSLVAFYSDVTGMN-------TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV--- 154 (250)
Q Consensus 85 ~~~~l~~fi~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~--- 154 (250)
+.++|.+++.+..... ...++.++++.++.... .+.+ .+++ |||++|+.+ .|.+..+|..+.
T Consensus 109 ~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v---~f~a--~wC~~C~~~--~p~~~~~a~~~~~~~ 180 (241)
T 3idv_A 109 TQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDAD-IILV---EFYA--PWCGHCKKL--APEYEKAAKELSKRS 180 (241)
T ss_dssp CHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCS-EEEE---EEEC--TTCTGGGGT--HHHHHHHHHHHHTSS
T ss_pred cHHHHHHHHhhccCcccccccccceeccHHHHHHhhccCC-eEEE---EEEC--CCCHHHHHh--HHHHHHHHHHHhccC
Confidence 9999999999988754 22346667776653322 2222 3466 999999999 999999998872
Q ss_pred ----------------HHHHHHHhhhhHHHHhhhHHHHHHHhhcccccccchHHHHh-hHH-HHHHHhccccc
Q 025648 155 ----------------LLRLVYIFLPTLLIFAQFTWRRLIRNLKLGSLLEHPRTYLN-RAI-QLFKTLNEPCK 209 (250)
Q Consensus 155 ----------------~~~~~i~~fPti~~f~~~~~~~~~~~~~~~~~~~~~~~y~g-r~~-~~~~~l~~~~~ 209 (250)
+.+|+|.++||+++|.+|. ...|.| +.. +|.+||+++++
T Consensus 181 ~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~----------------~~~~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 181 PPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGR----------------PYDYNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp SCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTE----------------EEECCSCCSHHHHHHHHHHHTT
T ss_pred CcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCe----------------EEEecCCCCHHHHHHHHHhhhC
Confidence 4899999999999998765 233667 444 89999987663
No 2
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.92 E-value=8.5e-26 Score=221.15 Aligned_cols=181 Identities=18% Similarity=0.257 Sum_probs=149.8
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSL 89 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l 89 (250)
.+++++|.|||+||++|+++.|.|+++++.+++.+.+..+|+++++.++++|||+++||+++++++.+..|.|.++.++|
T Consensus 454 ~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~~l 533 (780)
T 3apo_A 454 DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQSSIHEYEGHHSAEQI 533 (780)
T ss_dssp CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEECSCSCHHHH
T ss_pred CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcCCeEEEEcCCceeeecCcccHHHH
Confidence 67899999999999999999999999999998767777789999999999999999999999944445899999999999
Q ss_pred HHHHHHhhCCCCCCCCCCCccccCCCCCcc--cccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH--------------
Q 025648 90 VAFYSDVTGMNTASLDKISPDKVGKASNHE--KHNNTEEESCPFSWARSPENLLQQETYLALATAF-------------- 153 (250)
Q Consensus 90 ~~fi~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f-------------- 153 (250)
.+|+++.+++.+..++.+++++++.....+ +++ .+++ |||+||+++ .|.|+.+|..|
T Consensus 534 ~~fi~~~~~~~v~~l~~~~f~~~v~~~~~~~~~lv---~F~a--p~C~~c~~~--~p~~~~lA~~~~~~v~~~~vd~~~~ 606 (780)
T 3apo_A 534 LEFIEDLRNPSVVSLTPSTFNELVKQRKHDEVWMV---DFYS--PWSHPSQVL--MPEWKRMARTLTGLINVGSVDCGQY 606 (780)
T ss_dssp HHHHHHHHSCSEEECCHHHHHHHTTTCCTTCCEEE---EEEC--TTCHHHHHH--HHHHHHHHHHHTTTSEEEEEETTTT
T ss_pred HHHHHhhcccceeecCcccHHHHhhccCCCCeEEE---EEEC--CCCHHHHHh--hHHHHHHHHHhhCCeEEEEEECcch
Confidence 999999999888888888888887653322 222 3356 999999999 99999999987
Q ss_pred --HHHHHHHHhhhhHHHHhhhHHHHHHHhhcccccccchHHHHh--hH-HHHHHHhcccc
Q 025648 154 --VLLRLVYIFLPTLLIFAQFTWRRLIRNLKLGSLLEHPRTYLN--RA-IQLFKTLNEPC 208 (250)
Q Consensus 154 --~~~~~~i~~fPti~~f~~~~~~~~~~~~~~~~~~~~~~~y~g--r~-~~~~~~l~~~~ 208 (250)
+|.+++|.+||||++|+.|.- ....+..|.| |. ..|.+|+.+..
T Consensus 607 ~~l~~~~~v~~~Pti~~~~~~~~-----------~~~~~~~y~g~~~~~~~l~~fi~~~~ 655 (780)
T 3apo_A 607 HSFCTQENVQRYPEIRFYPQKSS-----------KAYQYHSYNGWNRDAYSLRSWGLGFL 655 (780)
T ss_dssp HHHHHHTTCCSSSEEEEECCCSS-----------SCCSCEECCCSCCSHHHHHHHHHTTS
T ss_pred HHHHHHcCCCCCCeEEEEcCCCc-----------CccchhhcCCCCCCHHHHHHHHhhhc
Confidence 257899999999999987650 0013555666 44 38888888665
No 3
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.90 E-value=2e-25 Score=199.80 Aligned_cols=180 Identities=15% Similarity=0.158 Sum_probs=142.2
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCC--CChhHHHhhCCCc--cCeEEEE-eCceeEEEe---
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA--IRPSILSKYGVHG--FPTLFLL-NSSMRVRYH--- 81 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~--~~~~l~~~~~I~~--~PTi~l~-~g~~~~~~~--- 81 (250)
..++++|+||++||++|+++.|.|+++++.|++...+..+|++ .++.+++.|||++ +||++++ .++...+|.
T Consensus 134 ~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~ 213 (361)
T 3uem_A 134 EIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPES 213 (361)
T ss_dssp SCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CCEECCSS
T ss_pred CCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCcccccCCCc
Confidence 3457899999999999999999999999999988888888998 6899999999998 9999999 556677886
Q ss_pred CCCCHHHHHHHHHHhhCCCC------------------CCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCc
Q 025648 82 GSRTLDSLVAFYSDVTGMNT------------------ASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQ 143 (250)
Q Consensus 82 G~~~~~~l~~fi~~~~~~~~------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~ 143 (250)
|.++.++|.+|+++.+..+. ..++..+++.++......+++ .+|+ |||++|+.+ .
T Consensus 214 ~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv---~f~a--~wC~~C~~~--~ 286 (361)
T 3uem_A 214 EELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFV---EFYA--PWCGHCKQL--A 286 (361)
T ss_dssp CCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTCEEEE---EEEC--TTCHHHHHH--H
T ss_pred cccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcccCCCcEEE---EEec--CcCHhHHHH--H
Confidence 78999999999999875321 123445555544332333333 3467 999999999 9
Q ss_pred hHHHHHHHHHH----------------HHHHHHHhhhhHHHHhhhHHHHHHHhhcccccccchHHHHh-hHH-HHHHHhc
Q 025648 144 ETYLALATAFV----------------LLRLVYIFLPTLLIFAQFTWRRLIRNLKLGSLLEHPRTYLN-RAI-QLFKTLN 205 (250)
Q Consensus 144 ~~~~~lA~~f~----------------~~~~~i~~fPti~~f~~~~~~~~~~~~~~~~~~~~~~~y~g-r~~-~~~~~l~ 205 (250)
|.|..+|..|. +.+|+|.+|||+++|++|. + +.+..|.| |.. +|.+||+
T Consensus 287 p~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~Pt~~~~~~~~----------~---~~~~~~~G~~~~~~l~~~l~ 353 (361)
T 3uem_A 287 PIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASA----------D---RTVIDYNGERTLDGFKKFLE 353 (361)
T ss_dssp HHHHHHHHHTTTCSSEEEEEEETTTCBCSSCCCCSSSEEEEECSSS----------S---CCCEECCSCSSHHHHHHHHT
T ss_pred HHHHHHHHHhccCCcEEEEEEECCccchhhcCCcccCeEEEEECCC----------C---cceeEecCCCCHHHHHHHHH
Confidence 99999999873 2789999999999998763 0 45678888 665 9999999
Q ss_pred cccc
Q 025648 206 EPCK 209 (250)
Q Consensus 206 ~~~~ 209 (250)
++++
T Consensus 354 ~~~~ 357 (361)
T 3uem_A 354 SGGQ 357 (361)
T ss_dssp TTSC
T ss_pred hcCC
Confidence 7664
No 4
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.90 E-value=6.2e-25 Score=184.59 Aligned_cols=153 Identities=12% Similarity=0.091 Sum_probs=124.8
Q ss_pred cCCCeEEEEEE-----cCCChhHHhhhHHHHHHHHHc--CCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEE
Q 025648 9 NSHEYVAVLFY-----ASWCPFSRNFRPSFSVLSSLY--SSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRY 80 (250)
Q Consensus 9 ~~~~~vlV~Fy-----a~wC~~C~~~~p~~e~la~~~--~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~ 80 (250)
+..++++|.|| +|||++|+.+.|.|+++++.+ .+.+.++.+||++++++|++|+|+++||+++| +++...+|
T Consensus 18 ~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~~~~~~~~ 97 (229)
T 2ywm_A 18 EFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIEGDKDYGIRY 97 (229)
T ss_dssp HCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEESSSCCCEEE
T ss_pred hccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEECCCccccee
Confidence 34556666666 899999999999999998887 66778888899999999999999999999999 77788999
Q ss_pred eCCCCHHHHHHHHHHhhC--CCCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH-----
Q 025648 81 HGSRTLDSLVAFYSDVTG--MNTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----- 153 (250)
Q Consensus 81 ~G~~~~~~l~~fi~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----- 153 (250)
.|.++.+++.+|+...+. ..+..+++++++.+.......... .+++ |||++|+.+ .|.+..+|..+
T Consensus 98 ~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v---~F~a--~wC~~C~~~--~~~~~~~~~~~~~v~~ 170 (229)
T 2ywm_A 98 IGLPAGLEFTTLINGIFHVSQRKPQLSEKTLELLQVVDIPIEIW---VFVT--TSCGYCPSA--AVMAWDFALANDYITS 170 (229)
T ss_dssp ESCCCTTHHHHHHHHHHHHHTTCCSCCHHHHHHHTTCCSCEEEE---EEEC--TTCTTHHHH--HHHHHHHHHHCTTEEE
T ss_pred cCCccHHHHHHHHHHHHhccCCccCCCHHHHHHHHhcCCCeEEE---EEEC--CCCcchHHH--HHHHHHHHHHCCCeEE
Confidence 999999999999998764 345566777777665432221122 3466 999999999 99999999876
Q ss_pred ----------HHHHHHHHhhhhHHH
Q 025648 154 ----------VLLRLVYIFLPTLLI 168 (250)
Q Consensus 154 ----------~~~~~~i~~fPti~~ 168 (250)
++.+|+|.++||+++
T Consensus 171 ~~vd~~~~~~l~~~~~v~~~Pt~~~ 195 (229)
T 2ywm_A 171 KVIDASENQDLAEQFQVVGVPKIVI 195 (229)
T ss_dssp EEEEGGGCHHHHHHTTCCSSSEEEE
T ss_pred EEEECCCCHHHHHHcCCcccCEEEE
Confidence 348999999999988
No 5
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.90 E-value=1.6e-24 Score=181.42 Aligned_cols=156 Identities=12% Similarity=0.138 Sum_probs=124.0
Q ss_pred CCCeEEEEEEcC-CChhHHhhhHHHHHHHHHcCCCCEEEEEcCCC--ChhHHHhhCCCccCeEEEE-eCcee-EEEeCCC
Q 025648 10 SHEYVAVLFYAS-WCPFSRNFRPSFSVLSSLYSSIPHFAIEESAI--RPSILSKYGVHGFPTLFLL-NSSMR-VRYHGSR 84 (250)
Q Consensus 10 ~~~~vlV~Fya~-wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~--~~~l~~~~~I~~~PTi~l~-~g~~~-~~~~G~~ 84 (250)
.+..++|+||++ ||++|+++.|.++++++.. +.+.+..+|+++ +++++++|||+++||+++| +|+.. .+|.|.+
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~~-~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~ 99 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSELT-DKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLP 99 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTTC-TTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTBCCSEEEESCC
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhhC-CceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCceeeEEEeccC
Confidence 456778999999 9999999999999999764 445667778988 8999999999999999999 77664 8999999
Q ss_pred CHHHHHHHHHHhhCC--CCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH--------
Q 025648 85 TLDSLVAFYSDVTGM--NTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV-------- 154 (250)
Q Consensus 85 ~~~~l~~fi~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~-------- 154 (250)
+.+++.+|+...+.. ....+++++++.+.........+ .+++ |||++|+.+ .|.+..+|..+.
T Consensus 100 ~~~~l~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~v---~F~a--~wC~~C~~~--~p~~~~l~~~~~~~~~~~v~ 172 (226)
T 1a8l_A 100 AGHEFAAFLEDIVDVSREETNLMDETKQAIRNIDQDVRIL---VFVT--PTCPYCPLA--VRMAHKFAIENTKAGKGKIL 172 (226)
T ss_dssp CTTHHHHHHHHHHHHHHTCCCCCHHHHHHHTTCCSCEEEE---EEEC--SSCTTHHHH--HHHHHHHHHHHHHTTCCCEE
T ss_pred cHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcEEE---EEeC--CCCCccHHH--HHHHHHHHHhcccccCCcEE
Confidence 999999999886532 33455555666554332222122 3467 999999999 999999998874
Q ss_pred ------------HHHHHHHhhhhHHHHhhhH
Q 025648 155 ------------LLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 155 ------------~~~~~i~~fPti~~f~~~~ 173 (250)
+.+|+|.++||+++|.+|.
T Consensus 173 ~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 203 (226)
T 1a8l_A 173 GDMVEAIEYPEWADQYNVMAVPKIVIQVNGE 203 (226)
T ss_dssp EEEEEGGGCHHHHHHTTCCSSCEEEEEETTE
T ss_pred EEEEEcccCHHHHHhCCCcccCeEEEEeCCc
Confidence 3789999999999997665
No 6
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.89 E-value=2.7e-24 Score=183.48 Aligned_cols=185 Identities=11% Similarity=0.086 Sum_probs=137.7
Q ss_pred ccCCCeEEEEEEcCC--ChhHHhhhHHHHHHHHHcC---CC--CEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEE
Q 025648 8 KNSHEYVAVLFYASW--CPFSRNFRPSFSVLSSLYS---SI--PHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRY 80 (250)
Q Consensus 8 ~~~~~~vlV~Fya~w--C~~C~~~~p~~e~la~~~~---~~--~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~ 80 (250)
..-+++++|.||++| |++|+.+.|.++++++.++ +. +.+..+|++++++++++|||+++||+++|+| ..+|
T Consensus 22 ~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~~g--~~~~ 99 (243)
T 2hls_A 22 AEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFLGG--EVRW 99 (243)
T ss_dssp TTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEETTT--TEEE
T ss_pred HhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEECC--ceeE
Confidence 345689999999999 9999999999999999853 32 6677778999999999999999999999955 8899
Q ss_pred eCCCCHHHHHHHHHHhhC--CCCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH----
Q 025648 81 HGSRTLDSLVAFYSDVTG--MNTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV---- 154 (250)
Q Consensus 81 ~G~~~~~~l~~fi~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~---- 154 (250)
.|.++.+++..|+...+. .....++++.++.+....... .+..+++ |||++|+.+ .|.+..+|..+.
T Consensus 100 ~G~~~~~~l~~fv~~~l~~~~~~~~l~~~~~~~~~~~~~~~---~vv~F~a--~wC~~C~~~--~p~l~~la~~~~~~~~ 172 (243)
T 2hls_A 100 TGIPAGEEIRALVEVIMRLSEDESGLEDATKEALKSLKGRV---HIETIIT--PSCPYCPYA--VLLAHMFAYEAWKQGN 172 (243)
T ss_dssp ESCCCTTHHHHHHHHHHHHHTTCCCCCHHHHHHHHHCCSCE---EEEEEEC--SSCSSHHHH--HHHHHHHHHHHHHTTC
T ss_pred cCCCcHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHcCCCc---EEEEEEC--CCCCCcHHH--HHHHHHHHHHcccccC
Confidence 999888889998887652 222233333333322111111 1223467 999999999 999999998871
Q ss_pred ----------------HHHHHHHhhhhHHHHhhhHHHHHHHhhcccccccchHHHHh-hH-HHHHHHhcccccCCccccc
Q 025648 155 ----------------LLRLVYIFLPTLLIFAQFTWRRLIRNLKLGSLLEHPRTYLN-RA-IQLFKTLNEPCKRSNLQEG 216 (250)
Q Consensus 155 ----------------~~~~~i~~fPti~~f~~~~~~~~~~~~~~~~~~~~~~~y~g-r~-~~~~~~l~~~~~t~~~~~g 216 (250)
+.+|+|.++||+++ +|. . .|.| |. .++.++|++..++++..+|
T Consensus 173 ~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~G~--------------~---~~~G~~~~~~l~~~l~~~~~~~~~~~g 233 (243)
T 2hls_A 173 PVILSEAVEAYENPDIADKYGVMSVPSIAI--NGY--------------L---VFVGVPYEEDFLDYVKSAAEGRLTVKG 233 (243)
T ss_dssp CCEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTE--------------E---EEESCCCHHHHHHHHHHHHTTCCCCCC
T ss_pred CcEEEEEEECccCHHHHHHcCCeeeCeEEE--CCE--------------E---EEeCCCCHHHHHHHHHHHhhcccccCC
Confidence 27889999999987 443 1 2667 44 4899999988888999999
Q ss_pred cchh
Q 025648 217 ALNA 220 (250)
Q Consensus 217 ~~~~ 220 (250)
.+++
T Consensus 234 ~~~~ 237 (243)
T 2hls_A 234 PIRA 237 (243)
T ss_dssp ----
T ss_pred CcCc
Confidence 8764
No 7
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.88 E-value=4.5e-24 Score=190.84 Aligned_cols=172 Identities=13% Similarity=0.205 Sum_probs=136.2
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHH-------HHHHHHHcCC-CCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEE
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPS-------FSVLSSLYSS-IPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVR 79 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~-------~e~la~~~~~-~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~ 79 (250)
+.+++++|+||||||+ |++++|. |+++++.+++ .+.++.+||++++++|++|+|+++||+++| +|+ +.+
T Consensus 26 ~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~~~~g~-~~~ 103 (350)
T 1sji_A 26 KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFDEEGSLYVLKGDR-TIE 103 (350)
T ss_dssp TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTE-EEE
T ss_pred hhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCCccceEEEEECCc-EEE
Confidence 4578999999999999 9999999 9999999876 377888899999999999999999999999 666 779
Q ss_pred EeCCCCHHHHHHHHHHhhCCCCCCCC-CCCccccCC-CCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----
Q 025648 80 YHGSRTLDSLVAFYSDVTGMNTASLD-KISPDKVGK-ASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF---- 153 (250)
Q Consensus 80 ~~G~~~~~~l~~fi~~~~~~~~~~l~-~~~~~~~~~-~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f---- 153 (250)
|.|.++.++|.+|+.+.+++.+..++ .++++.++. ... ...+.+ +. +| |... .+.|.++|..+
T Consensus 104 ~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~-~~vv~f---f~--~~---~~~~--~~~~~~~A~~~~~~~ 172 (350)
T 1sji_A 104 FDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQ-IKLIGF---FK--SE---ESEY--YKAFEEAAEHFQPYI 172 (350)
T ss_dssp ECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSS-CEEEEE---CS--CT---TSHH--HHHHHHHHHHTTTTS
T ss_pred ecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCC-cEEEEE---EC--CC---CcHH--HHHHHHHHHhhccCc
Confidence 99999999999999999998877774 345666543 222 222222 22 33 5555 68899999987
Q ss_pred ---------HHHHHHHHhhhhHHHHhhhHHHHHHHhhcccccccchHHHHh--hH-HHHHHHhcccc
Q 025648 154 ---------VLLRLVYIFLPTLLIFAQFTWRRLIRNLKLGSLLEHPRTYLN--RA-IQLFKTLNEPC 208 (250)
Q Consensus 154 ---------~~~~~~i~~fPti~~f~~~~~~~~~~~~~~~~~~~~~~~y~g--r~-~~~~~~l~~~~ 208 (250)
++.+++|. +|+|++|.++. +.+..|.| +. ..|.+|+++.+
T Consensus 173 ~f~~~~~~~~~~~~~v~-~p~i~~~~~~~--------------~~~~~y~g~~~~~~~l~~fi~~~~ 224 (350)
T 1sji_A 173 KFFATFDKGVAKKLSLK-MNEVDFYEPFM--------------DEPIAIPDKPYTEEELVEFVKEHQ 224 (350)
T ss_dssp EEEEECCHHHHHHHTCC-TTCEEEECTTC--------------SSCEECSSSSCCHHHHHHHHHHHC
T ss_pred EEEEECCHHHHHHcCCC-CCcEEEEeCCC--------------CCceecCCCCCCHHHHHHHHHHcC
Confidence 56889999 99999998754 45667777 33 38889988655
No 8
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.88 E-value=1.5e-23 Score=205.15 Aligned_cols=157 Identities=14% Similarity=0.191 Sum_probs=134.1
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCc----eeEEEeC-C
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSS----MRVRYHG-S 83 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~----~~~~~~G-~ 83 (250)
.+.+++|.||+|||++|+++.|.|+++++.+++.+.++.+||+.+..+|++|+|+++||+++| .+. ....|.| .
T Consensus 562 ~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~ 641 (780)
T 3apo_A 562 HDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWN 641 (780)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSC
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCC
Confidence 367899999999999999999999999999998888999999999999999999999999999 443 2578999 8
Q ss_pred CCHHHHHHHHHHhhCCCCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------
Q 025648 84 RTLDSLVAFYSDVTGMNTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF---------- 153 (250)
Q Consensus 84 ~~~~~l~~fi~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f---------- 153 (250)
++.++|.+||.+.++..+..++.+++++.+......+.+ .+++ |||++|+.+ .|.+..+|..+
T Consensus 642 ~~~~~l~~fi~~~~~~~v~~l~~~~~~~~~~~~~~~v~v---~F~a--~wC~~C~~~--~p~~~~la~~~~~~~~~~~vd 714 (780)
T 3apo_A 642 RDAYSLRSWGLGFLPQASIDLTPQTFNEKVLQGKTHWVV---DFYA--PWSGPSQNF--APEFELLARMIKGKVRAGKVD 714 (780)
T ss_dssp CSHHHHHHHHHTTSCCCSEEECHHHHHHHTTTCSSCEEE---EEEC--TTCHHHHHH--HHHHHHHHHHHTTTCEEEEEE
T ss_pred CCHHHHHHHHhhhcccccccCCHHHHHHHHhcCCCeEEE---EEEC--CCCHHHHHH--HHHHHHHHHHhcCCceEEEEE
Confidence 999999999999998877788888886544333333333 3467 999999999 99999999987
Q ss_pred ------HHHHHHHHhhhhHHHHhhhH
Q 025648 154 ------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 154 ------~~~~~~i~~fPti~~f~~~~ 173 (250)
++.+|+|.++||+++|.+|.
T Consensus 715 ~~~~~~~~~~~~v~~~Pt~~~~~~g~ 740 (780)
T 3apo_A 715 CQAYPQTCQKAGIKAYPSVKLYQYER 740 (780)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEEEEET
T ss_pred CCCCHHHHHhcCCCcCCEEEEEcCCC
Confidence 24889999999999997765
No 9
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.88 E-value=2.1e-23 Score=187.93 Aligned_cols=174 Identities=14% Similarity=0.177 Sum_probs=134.7
Q ss_pred cCCCeEEEEEEcCCChhHHhhh------HHHHHHHHHcCC-CCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEE
Q 025648 9 NSHEYVAVLFYASWCPFSRNFR------PSFSVLSSLYSS-IPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRY 80 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~------p~~e~la~~~~~-~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~ 80 (250)
+.+++++|+||||||++|+... |.|+++++.+.+ .+.++.+||++++++|++|+|+++||+++| +|+ ...|
T Consensus 28 ~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~~PTl~~f~~G~-~~~y 106 (367)
T 3us3_A 28 KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTEEDSIYVFKEDE-VIEY 106 (367)
T ss_dssp HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTE-EEEC
T ss_pred hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCcCceEEEEECCc-EEEe
Confidence 4578999999999999974333 799999999876 477888899999999999999999999999 655 4699
Q ss_pred eCCCCHHHHHHHHHHhhCCCCCCCCC-CCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH-----
Q 025648 81 HGSRTLDSLVAFYSDVTGMNTASLDK-ISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----- 154 (250)
Q Consensus 81 ~G~~~~~~l~~fi~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~----- 154 (250)
.|.++.+.|.+|+.+.+++.+..++. ++++.++........+.+ +. +| |... .+.|.++|..+.
T Consensus 107 ~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~f---f~--~~---~~~~--~~~f~~~A~~~~~~~~F 176 (367)
T 3us3_A 107 DGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGY---FK--NK---DSEH--YKAFKEAAEEFHPYIPF 176 (367)
T ss_dssp CSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEE---CS--CT---TCHH--HHHHHHHHHHHTTTSCE
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEE---EC--CC---CchH--HHHHHHHHHhhcCCcEE
Confidence 99999999999999999988877743 566666542222222222 22 33 4455 778999999873
Q ss_pred --------HHHHHHHhhhhHHHHhhhHHHHHHHhhcccccccchHHHHh--hHH-HHHHHhcccc
Q 025648 155 --------LLRLVYIFLPTLLIFAQFTWRRLIRNLKLGSLLEHPRTYLN--RAI-QLFKTLNEPC 208 (250)
Q Consensus 155 --------~~~~~i~~fPti~~f~~~~~~~~~~~~~~~~~~~~~~~y~g--r~~-~~~~~l~~~~ 208 (250)
..+|+|.. |+|++|+++. +.+..|.| +.. .|.+|+++.+
T Consensus 177 ~~~~~~~~~~~~~v~~-p~i~lf~~~~--------------~~~~~y~g~~~~~~~l~~fi~~~~ 226 (367)
T 3us3_A 177 FATFDSKVAKKLTLKL-NEIDFYEAFM--------------EEPVTIPDKPNSEEEIVNFVEEHR 226 (367)
T ss_dssp EEECCHHHHHHHTCCT-TCEEEECTTC--------------SSCEECSSSSCCHHHHHHHHHHTC
T ss_pred EEECCHHHHHHcCCCC-CeEEEEcCCC--------------CCCeecCCCCCCHHHHHHHHHHcC
Confidence 47888885 9999998755 55677776 443 8999999665
No 10
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.88 E-value=4e-22 Score=148.83 Aligned_cols=87 Identities=21% Similarity=0.371 Sum_probs=78.8
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
...+++++|+|||+||++|+.+.|.++++++.++++. +..+|++++++++++|+|+++||+++| +|+.+.++.| .+.
T Consensus 17 ~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~-~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G~~v~~~~G-~~~ 94 (105)
T 3zzx_A 17 EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVV-FLKVDVDECEDIAQDNQIACMPTFLFMKNGQKLDSLSG-ANY 94 (105)
T ss_dssp HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEE-EEEEETTTCHHHHHHTTCCBSSEEEEEETTEEEEEEES-CCH
T ss_pred hcCCCEEEEEEECCCCCCccCCCcchhhhhhccCCeE-EEEEecccCHHHHHHcCCCeecEEEEEECCEEEEEEeC-cCH
Confidence 3467899999999999999999999999999998764 455688999999999999999999999 9999999999 589
Q ss_pred HHHHHHHHHh
Q 025648 87 DSLVAFYSDV 96 (250)
Q Consensus 87 ~~l~~fi~~~ 96 (250)
++|.++|+++
T Consensus 95 ~~l~~~i~k~ 104 (105)
T 3zzx_A 95 DKLLELVEKN 104 (105)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999999875
No 11
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.86 E-value=8.5e-23 Score=179.26 Aligned_cols=175 Identities=18% Similarity=0.271 Sum_probs=133.9
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCC--CChhHHHhhCCCccCeEEEE-eCc---------
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA--IRPSILSKYGVHGFPTLFLL-NSS--------- 75 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~--~~~~l~~~~~I~~~PTi~l~-~g~--------- 75 (250)
.+.+++++|+|||+||++|+++.|.|+++++.+++...+..++|+ .++++|++|+|.++||+++| +|+
T Consensus 32 ~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g~~ 111 (298)
T 3ed3_A 32 HNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPKIDLSKPIDN 111 (298)
T ss_dssp TSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEEEECCCC--------
T ss_pred HhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEEEECCceeecccccc
Confidence 456889999999999999999999999999999987778888887 68899999999999999999 665
Q ss_pred --------eeEEEeCCCCHHHHHHHHHHhhCCCCCCCCC-CCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHH
Q 025648 76 --------MRVRYHGSRTLDSLVAFYSDVTGMNTASLDK-ISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETY 146 (250)
Q Consensus 76 --------~~~~~~G~~~~~~l~~fi~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~ 146 (250)
....|.|.++.+.|.+|+.+.++..+..++. ++++.++.... ...+.++.. .... .+.|
T Consensus 112 ~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~-~~~vi~fs~---------~~~~--~~~f 179 (298)
T 3ed3_A 112 AKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSP-KLSVVLFSK---------QDKI--SPVY 179 (298)
T ss_dssp -----CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCS-SEEEEEEES---------SSSC--CHHH
T ss_pred cccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCC-ceEEEEEcC---------CCcc--hHHH
Confidence 4789999999999999999999988877743 55666665432 222211111 1123 6789
Q ss_pred HHHHHHHHH------------------HHH-----HH-------------HhhhhHHHHhhhHHHHHHHhhcccccccch
Q 025648 147 LALATAFVL------------------LRL-----VY-------------IFLPTLLIFAQFTWRRLIRNLKLGSLLEHP 190 (250)
Q Consensus 147 ~~lA~~f~~------------------~~~-----~i-------------~~fPti~~f~~~~~~~~~~~~~~~~~~~~~ 190 (250)
.++|..|.. .++ +| ..+|+|++|.+.. +.+
T Consensus 180 ~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~--------------~~~ 245 (298)
T 3ed3_A 180 KSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADK--------------DKF 245 (298)
T ss_dssp HHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTT--------------TEE
T ss_pred HHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCC--------------Cce
Confidence 999998732 112 34 5689999997655 667
Q ss_pred HHHHhh---HHHHHHHhcccc
Q 025648 191 RTYLNR---AIQLFKTLNEPC 208 (250)
Q Consensus 191 ~~y~gr---~~~~~~~l~~~~ 208 (250)
..|.|. ...|.+||.+..
T Consensus 246 ~~y~g~~~~~~~i~~fi~~~~ 266 (298)
T 3ed3_A 246 WEYEGNSINKNDISKFLRDTF 266 (298)
T ss_dssp EECCCSSCCHHHHHHHHHHHH
T ss_pred EEeccccCCHHHHHHHHHhhc
Confidence 788862 248999988544
No 12
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.86 E-value=1.8e-22 Score=182.55 Aligned_cols=174 Identities=18% Similarity=0.260 Sum_probs=117.3
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcC------CCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeE-EE
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS------SIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRV-RY 80 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~------~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~-~~ 80 (250)
+.+++++|+||||||++|+++.|.|+++++.+. +.+.++.+||+.++++|++|+|+++||+++| +|+.+. .|
T Consensus 20 ~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~f~~G~~~~~~~ 99 (382)
T 2r2j_A 20 NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREY 99 (382)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEESEEEEEETTEEEEEEC
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCCEEEEEeCCcEeeeee
Confidence 467899999999999999999999999999983 4477888899999999999999999999999 777766 59
Q ss_pred eCCCCHHHHHHHHHHhhCCCCCCCCC-CCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH-----
Q 025648 81 HGSRTLDSLVAFYSDVTGMNTASLDK-ISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----- 154 (250)
Q Consensus 81 ~G~~~~~~l~~fi~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~----- 154 (250)
.|.++.++|.+|+.+.+++.+..++. ++++.+ .... ...+.++ . ++ +... .+.|..+|..+.
T Consensus 100 ~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~l-~~~~-~~~v~ff---~--~~---~~~~--~~~f~~~A~~~~~~~~F 167 (382)
T 2r2j_A 100 RGQRSVKALADYIRQQKSDPIQEIRDLAEITTL-DRSK-RNIIGYF---E--QK---DSDN--YRVFERVANILHDDCAF 167 (382)
T ss_dssp CSCCSHHHHHHHHHHHHSCCCEEC-------------C-CEEEEEE---S--CS---SSHH--HHHHHHHHHHHTTTCEE
T ss_pred cCcchHHHHHHHHHHhccCCceecCCHHHHHHh-cCCC-CEEEEEE---C--CC---CChh--HHHHHHHHHHhhccceE
Confidence 99999999999999999988777743 456552 2211 1222221 1 12 2223 456889998873
Q ss_pred -------HHHHHHHhhhhHHHHhhhHHHHHHHhhcccccccchHHHHh-h-H-HHHHHHhcccc
Q 025648 155 -------LLRLVYIFLPTLLIFAQFTWRRLIRNLKLGSLLEHPRTYLN-R-A-IQLFKTLNEPC 208 (250)
Q Consensus 155 -------~~~~~i~~fPti~~f~~~~~~~~~~~~~~~~~~~~~~~y~g-r-~-~~~~~~l~~~~ 208 (250)
..+++|.++| +++++.+. .+.+..|.| + . ..|.+|+++++
T Consensus 168 ~~~~~~~~~~~~v~~~p-i~~~~~~~-------------~~~~~~y~g~~~~~~~l~~fi~~~~ 217 (382)
T 2r2j_A 168 LSAFGDVSKPERYSGDN-IIYKPPGH-------------SAPDMVYLGAMTNFDVTYNWIQDKC 217 (382)
T ss_dssp EEEESCC--------CE-EEEECSSS-------------SSCCEECCSCTTCHHHHHHHHHHHH
T ss_pred EEEehhhHHhhCCCCCc-eEECCCCC-------------CCcCcccCCCCCCHHHHHHHHHhcc
Confidence 3678899999 66655422 023455666 3 2 37777777544
No 13
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.84 E-value=8.2e-22 Score=182.78 Aligned_cols=178 Identities=19% Similarity=0.294 Sum_probs=131.1
Q ss_pred CCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHHH
Q 025648 11 HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSL 89 (250)
Q Consensus 11 ~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~l 89 (250)
+++++|+||||||++|+++.|.|+++++.+++.+.++.+||+.++++|++|+|+++||+++| +|+.+.+|.|.++.++|
T Consensus 21 ~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~g~~~~~~~G~~~~~~l 100 (481)
T 3f8u_A 21 AGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGI 100 (481)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEEEEETTEEEEECCSCSSHHHH
T ss_pred CCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEEEEeCCceeeeecCccCHHHH
Confidence 38999999999999999999999999999998777888899999999999999999999999 88889999999999999
Q ss_pred HHHHHHhhCCCCCCC-CCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH-------------HH
Q 025648 90 VAFYSDVTGMNTASL-DKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF-------------VL 155 (250)
Q Consensus 90 ~~fi~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f-------------~~ 155 (250)
.+|+.+.+++.+..+ +.++++.+....... .+.++ ...|... .+.|..+|..+ +.
T Consensus 101 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-vv~~~--------~~~~~~~--~~~f~~~a~~~~~~~~F~~~~~~~~~ 169 (481)
T 3f8u_A 101 VSHLKKQAGPASVPLRTEEEFKKFISDKDAS-IVGFF--------DDSFSEA--HSEFLKAASNLRDNYRFAHTNVESLV 169 (481)
T ss_dssp HHHHHHHTSCSEEEECSHHHHHHHTTSSSCE-EEEEE--------SCTTCHH--HHHHHHHHHHHTTTSCEEEECCHHHH
T ss_pred HHHHHhhcccCceecCCHHHHHHHHhcCCcE-EEEEE--------CCCccch--HHHHHHHHHHhccCceEEEECCHHHH
Confidence 999999999887776 334566655543211 11111 1234555 67799999887 24
Q ss_pred HHHHHHhhhhHHHHhhhHHHHHHHhhcccccccchHHHH-h--hHHHHHHHhcccc
Q 025648 156 LRLVYIFLPTLLIFAQFTWRRLIRNLKLGSLLEHPRTYL-N--RAIQLFKTLNEPC 208 (250)
Q Consensus 156 ~~~~i~~fPti~~f~~~~~~~~~~~~~~~~~~~~~~~y~-g--r~~~~~~~l~~~~ 208 (250)
.++++...| |++|..+. +.. ...+.+..|. | -...|.+|++..+
T Consensus 170 ~~~~v~~~~-i~~~~p~~---~~~-----~~~~~~~~y~~~~~~~~~l~~fi~~~~ 216 (481)
T 3f8u_A 170 NEYDDNGEG-IILFRPSH---LTN-----KFEDKTVAYTEQKMTSGKIKKFIQENI 216 (481)
T ss_dssp HHHCSSSEE-EEEECCGG---GCB-----TTBCSEEECCCSSCCHHHHHHHHHHHT
T ss_pred HHhCCCCCc-EEEEeccc---ccC-----ccCCcccccCCCCCCHHHHHHHHHHhC
Confidence 778888777 54454111 000 0113345555 3 2237788887554
No 14
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.83 E-value=2e-20 Score=143.05 Aligned_cols=90 Identities=23% Similarity=0.296 Sum_probs=79.3
Q ss_pred cccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcC-----CCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCcee--E
Q 025648 7 HKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS-----SIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMR--V 78 (250)
Q Consensus 7 ~~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~-----~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~--~ 78 (250)
..+.+++++|+|||+||++|+++.|.|+++++.+. +...+..+|++++++++++|+|+++||+++| +|+.. .
T Consensus 29 ~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~ 108 (127)
T 3h79_A 29 VMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGFPTMRYYTRIDKQEPF 108 (127)
T ss_dssp HTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEECSSCSSSCE
T ss_pred HhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccCCEEEEEeCCCCCCce
Confidence 34568999999999999999999999999998753 3567778899999999999999999999999 66543 7
Q ss_pred EEeCCCCHHHHHHHHHHh
Q 025648 79 RYHGSRTLDSLVAFYSDV 96 (250)
Q Consensus 79 ~~~G~~~~~~l~~fi~~~ 96 (250)
+|.|.++.++|.+||.++
T Consensus 109 ~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 109 EYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp ECCSCCCHHHHHHHHHHH
T ss_pred EecCCccHHHHHHHHHhc
Confidence 899999999999999875
No 15
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.83 E-value=5.1e-20 Score=136.63 Aligned_cols=91 Identities=14% Similarity=0.295 Sum_probs=84.5
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
.+.+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.
T Consensus 19 ~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~ 98 (111)
T 3gnj_A 19 YDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILYFKDGEYKGKMAGDVED 98 (111)
T ss_dssp TTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEEEEETTEEEEEEESSCCH
T ss_pred HhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEEEEECCEEEEEEeccCCH
Confidence 36789999999999999999999999999999998677777799999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHhhC
Q 025648 87 DSLVAFYSDVTG 98 (250)
Q Consensus 87 ~~l~~fi~~~~~ 98 (250)
++|.++|++.++
T Consensus 99 ~~l~~~l~~~l~ 110 (111)
T 3gnj_A 99 DEVEQMIADVLE 110 (111)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999998764
No 16
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.82 E-value=3e-20 Score=147.17 Aligned_cols=89 Identities=6% Similarity=0.065 Sum_probs=81.3
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCcee--E-------
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMR--V------- 78 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~--~------- 78 (250)
+.+++|+|+|||+||++|+.+.|.++++++++++...|..+|.|++++++++|+|+++||+++| +|+.+ .
T Consensus 39 ~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fFk~G~~v~vd~Gtgd~~ 118 (160)
T 2av4_A 39 EDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFFYRNKHMMIDLGTGNNN 118 (160)
T ss_dssp CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEEETTEEEEEECSSSCCS
T ss_pred cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEEEEecCCCCcC
Confidence 4788999999999999999999999999999998777888899999999999999999999988 88877 4
Q ss_pred EEeCCCC-HHHHHHHHHHhh
Q 025648 79 RYHGSRT-LDSLVAFYSDVT 97 (250)
Q Consensus 79 ~~~G~~~-~~~l~~fi~~~~ 97 (250)
+..|..+ .++|+++|+.++
T Consensus 119 k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 119 KINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp CBCSCCCCHHHHHHHHHHHH
T ss_pred eEEeecCCHHHHHHHHHHHH
Confidence 7889876 999999998875
No 17
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.82 E-value=1.5e-19 Score=133.54 Aligned_cols=91 Identities=23% Similarity=0.406 Sum_probs=83.9
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
.+.+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.
T Consensus 17 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 96 (108)
T 2trx_A 17 LKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSK 96 (108)
T ss_dssp TTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred HhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEEEEeCCEEEEEEecCCCH
Confidence 46789999999999999999999999999999987677777789999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHhhC
Q 025648 87 DSLVAFYSDVTG 98 (250)
Q Consensus 87 ~~l~~fi~~~~~ 98 (250)
++|.++|++.++
T Consensus 97 ~~l~~~l~~~l~ 108 (108)
T 2trx_A 97 GQLKEFLDANLA 108 (108)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhC
Confidence 999999998763
No 18
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.82 E-value=8.3e-20 Score=137.80 Aligned_cols=86 Identities=24% Similarity=0.384 Sum_probs=80.0
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 88 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~ 88 (250)
.+++++|+|||+||++|+++.|.++++++.+++ ..+..+|++++++++++|+|.++||+++| +|+.+.++.|. +.++
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~ 107 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSMPTFQFFKKGQKVGEFSGA-NKEK 107 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHHHHHHTTCCSSSEEEEESSSSEEEEEESC-CHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCccccEEEEEeCCeEEEEEcCC-CHHH
Confidence 789999999999999999999999999999988 56666689999999999999999999999 89999999999 9999
Q ss_pred HHHHHHHhh
Q 025648 89 LVAFYSDVT 97 (250)
Q Consensus 89 l~~fi~~~~ 97 (250)
|.++|++++
T Consensus 108 l~~~l~~~l 116 (116)
T 3qfa_C 108 LEATINELV 116 (116)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998763
No 19
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.82 E-value=4.9e-20 Score=143.33 Aligned_cols=90 Identities=13% Similarity=0.149 Sum_probs=84.4
Q ss_pred ccCCCeEEEEEEcCCC--hhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCC
Q 025648 8 KNSHEYVAVLFYASWC--PFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSR 84 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC--~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~ 84 (250)
.+.+++++|+|||+|| ++|+.+.|++++++++|++...+..+|.|++++++.+|||+++||+++| +|+.+.+..|.+
T Consensus 30 ~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPTlilFkdG~~v~~~vG~~ 109 (137)
T 2qsi_A 30 AHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPSLAVVQPERTLGVIAKIQ 109 (137)
T ss_dssp HTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSEEEEEECCEEEEEEESCC
T ss_pred hcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCEEEEEECCEEEEEEeCCC
Confidence 3445599999999999 9999999999999999998888888899999999999999999999999 999999999999
Q ss_pred CHHHHHHHHHHhh
Q 025648 85 TLDSLVAFYSDVT 97 (250)
Q Consensus 85 ~~~~l~~fi~~~~ 97 (250)
+.++|.++|++++
T Consensus 110 ~k~~l~~~l~~~l 122 (137)
T 2qsi_A 110 DWSSYLAQIGAML 122 (137)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 9999999999877
No 20
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.82 E-value=5.7e-20 Score=135.82 Aligned_cols=88 Identities=15% Similarity=0.103 Sum_probs=71.6
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLD 87 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~ 87 (250)
+.+++++|+|||+||++|+.+.|.++++++.+++ ..+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.+
T Consensus 16 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~ 94 (105)
T 4euy_A 16 EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYNY-VEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEILRESRFISLE 94 (105)
T ss_dssp TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCTT-EEEEEEEECCC---------CCCCEEEEEETTEEEEEEESSCCHH
T ss_pred hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcCC-ceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEEEEEeCCcCHH
Confidence 5789999999999999999999999999999975 45555688899999999999999999999 899999999999999
Q ss_pred HHHHHHHHhh
Q 025648 88 SLVAFYSDVT 97 (250)
Q Consensus 88 ~l~~fi~~~~ 97 (250)
+|.++|++++
T Consensus 95 ~l~~~l~~~~ 104 (105)
T 4euy_A 95 NLERTIQLFE 104 (105)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 21
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.81 E-value=1.9e-19 Score=134.64 Aligned_cols=91 Identities=21% Similarity=0.294 Sum_probs=84.7
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 88 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~ 88 (250)
.+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.++
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~ 95 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEA 95 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEEEETTEEEEEEESCCCHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEeCCEEEEEEeCCCCHHH
Confidence 688999999999999999999999999999987667777789999999999999999999999 8999999999999999
Q ss_pred HHHHHHHhhCCC
Q 025648 89 LVAFYSDVTGMN 100 (250)
Q Consensus 89 l~~fi~~~~~~~ 100 (250)
|.+|+.+.+++.
T Consensus 96 l~~~l~~~~~~~ 107 (112)
T 2voc_A 96 LQELVNKHLLEH 107 (112)
T ss_dssp HHHHHHTTSCSC
T ss_pred HHHHHHHHHHhh
Confidence 999999988765
No 22
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.81 E-value=2.7e-19 Score=131.40 Aligned_cols=87 Identities=20% Similarity=0.271 Sum_probs=81.9
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 88 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~ 88 (250)
.+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~ 97 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKEN 97 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEEEEEEESCCCHHH
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEEEEeCCeEEEEEeCCCCHHH
Confidence 789999999999999999999999999999998677777799999999999999999999999 8989999999999999
Q ss_pred HHHHHHHh
Q 025648 89 LVAFYSDV 96 (250)
Q Consensus 89 l~~fi~~~ 96 (250)
|.++|+++
T Consensus 98 l~~~l~~~ 105 (106)
T 3die_A 98 LAEVLDKH 105 (106)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 99999875
No 23
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.81 E-value=2.6e-19 Score=132.00 Aligned_cols=89 Identities=20% Similarity=0.346 Sum_probs=83.4
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLD 87 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~ 87 (250)
.++++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.+
T Consensus 19 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~ 98 (109)
T 3tco_A 19 RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLIFVNGQLVDSLVGAVDED 98 (109)
T ss_dssp HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHH
T ss_pred hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEEEEEcCCcEEEeeeccCCHH
Confidence 4589999999999999999999999999999998777778899999999999999999999999 899999999999999
Q ss_pred HHHHHHHHhh
Q 025648 88 SLVAFYSDVT 97 (250)
Q Consensus 88 ~l~~fi~~~~ 97 (250)
+|.++|++++
T Consensus 99 ~l~~~l~~~l 108 (109)
T 3tco_A 99 TLESTVNKYL 108 (109)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 24
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.81 E-value=3.8e-19 Score=131.14 Aligned_cols=90 Identities=20% Similarity=0.330 Sum_probs=83.0
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
.+.+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||++++ +|+.+.++.|..+.
T Consensus 16 ~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 95 (107)
T 1dby_A 16 LESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPK 95 (107)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEEESSSSEEEEEESCCCH
T ss_pred hcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEEEeCCEEEEEEeCCCCH
Confidence 45689999999999999999999999999999987666777789999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHhh
Q 025648 87 DSLVAFYSDVT 97 (250)
Q Consensus 87 ~~l~~fi~~~~ 97 (250)
++|.++|++.+
T Consensus 96 ~~l~~~l~~~l 106 (107)
T 1dby_A 96 ATIVQTVEKYL 106 (107)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 25
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.81 E-value=3.3e-19 Score=132.72 Aligned_cols=91 Identities=23% Similarity=0.388 Sum_probs=83.5
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
.+.+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||++++ +|+.+.++.|..+.
T Consensus 20 ~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 99 (112)
T 1t00_A 20 LKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVYQGGEVAKTIVGAKPK 99 (112)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred hhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEEEEeCCEEEEEEeCCCCH
Confidence 45688999999999999999999999999999977677777789999999999999999999999 88889999999999
Q ss_pred HHHHHHHHHhhC
Q 025648 87 DSLVAFYSDVTG 98 (250)
Q Consensus 87 ~~l~~fi~~~~~ 98 (250)
++|.++|++.+.
T Consensus 100 ~~l~~~l~~~l~ 111 (112)
T 1t00_A 100 AAIVRDLEDFIA 111 (112)
T ss_dssp HHHHHHTHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 999999998764
No 26
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.81 E-value=3.5e-19 Score=134.68 Aligned_cols=91 Identities=23% Similarity=0.354 Sum_probs=83.7
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
.+.+++++|+||++||++|+.+.|.++++++.+.+...+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.
T Consensus 28 ~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 107 (119)
T 1w4v_A 28 VNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDE 107 (119)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred HcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccEEEEEeCCcEEEEEcCCCCH
Confidence 45788999999999999999999999999999977667777789999999999999999999999 88889999999999
Q ss_pred HHHHHHHHHhhC
Q 025648 87 DSLVAFYSDVTG 98 (250)
Q Consensus 87 ~~l~~fi~~~~~ 98 (250)
++|.++|++.++
T Consensus 108 ~~l~~~l~~~l~ 119 (119)
T 1w4v_A 108 DQLEAFLKKLIG 119 (119)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999998764
No 27
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.81 E-value=8.4e-21 Score=161.22 Aligned_cols=94 Identities=20% Similarity=0.336 Sum_probs=79.2
Q ss_pred cccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC---CCEEEEEcC--CCChhHHHhhCCCccCeEEEE-eCc-----
Q 025648 7 HKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS---IPHFAIEES--AIRPSILSKYGVHGFPTLFLL-NSS----- 75 (250)
Q Consensus 7 ~~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~---~~~v~~~d~--~~~~~l~~~~~I~~~PTi~l~-~g~----- 75 (250)
..+.+++++|+|||+||++|+++.|.|+++++.+++ ...+..+|| +.++++|++|+|+++||+++| +|+
T Consensus 26 i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~g 105 (244)
T 3q6o_A 26 VLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXAFTXNGSG 105 (244)
T ss_dssp HSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECTTCCSSSC
T ss_pred HhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeCCCcCCCC
Confidence 345679999999999999999999999999999986 667777788 678999999999999999999 432
Q ss_pred eeEEEeCCCCHHHHHHHHHHhhCCCC
Q 025648 76 MRVRYHGSRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 76 ~~~~~~G~~~~~~l~~fi~~~~~~~~ 101 (250)
...++.| ++.+.|.++|.+.+....
T Consensus 106 ~~~~~~g-~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 106 AVFPVAG-ADVQTLRERLIDALESHH 130 (244)
T ss_dssp EECCCTT-CCHHHHHHHHHHHHHTCT
T ss_pred eeEecCC-CCHHHHHHHHHHHHHhcc
Confidence 2235555 799999999999886544
No 28
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=1.5e-19 Score=138.52 Aligned_cols=92 Identities=27% Similarity=0.530 Sum_probs=83.8
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcC----CCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeC
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS----SIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHG 82 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~----~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G 82 (250)
.+.+++++|+||++||++|+.+.|.++++++.++ +...+..+|++.+++++++|+|.++||+++| +|+.+.++.|
T Consensus 22 ~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~G 101 (133)
T 1x5d_A 22 LDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDG 101 (133)
T ss_dssp TTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSSEEEEEETTEEEEEECS
T ss_pred hcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeCeEEEEeCCCceEEecC
Confidence 4568899999999999999999999999999986 5567777799999999999999999999999 7888899999
Q ss_pred CCCHHHHHHHHHHhhCC
Q 025648 83 SRTLDSLVAFYSDVTGM 99 (250)
Q Consensus 83 ~~~~~~l~~fi~~~~~~ 99 (250)
.++.++|.+||.+.+..
T Consensus 102 ~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 102 GRTRSDIVSRALDLFSD 118 (133)
T ss_dssp CCSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhc
Confidence 99999999999998754
No 29
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.81 E-value=4.6e-19 Score=132.10 Aligned_cols=88 Identities=22% Similarity=0.336 Sum_probs=79.2
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
...+++++|+||++||++|+++.|.++++++.++++ .+..+|++++++++++|+|.++||+++| +|+.+.++.|. +.
T Consensus 21 ~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~-~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~ 98 (109)
T 3f3q_A 21 IAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQA-DFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEVAKVVGA-NP 98 (109)
T ss_dssp TTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTS-EEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESS-CH
T ss_pred HhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCC-EEEEEECCCCHHHHHHcCCCccCEEEEEECCEEEEEEeCC-CH
Confidence 456899999999999999999999999999999884 5555688899999999999999999999 88899999998 77
Q ss_pred HHHHHHHHHhh
Q 025648 87 DSLVAFYSDVT 97 (250)
Q Consensus 87 ~~l~~fi~~~~ 97 (250)
++|.++|++++
T Consensus 99 ~~l~~~i~~~l 109 (109)
T 3f3q_A 99 AAIKQAIAANA 109 (109)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhhC
Confidence 99999998763
No 30
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.80 E-value=2.7e-19 Score=137.52 Aligned_cols=91 Identities=23% Similarity=0.410 Sum_probs=83.9
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
.+.+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.
T Consensus 37 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 116 (128)
T 2o8v_B 37 LKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSK 116 (128)
T ss_dssp TTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred HhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEEeCCEEEEEEcCCCCH
Confidence 46789999999999999999999999999999987667777789999999999999999999999 88889999999999
Q ss_pred HHHHHHHHHhhC
Q 025648 87 DSLVAFYSDVTG 98 (250)
Q Consensus 87 ~~l~~fi~~~~~ 98 (250)
++|.++|++.++
T Consensus 117 ~~l~~~l~~~l~ 128 (128)
T 2o8v_B 117 GQLKEFLDANLA 128 (128)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhC
Confidence 999999998763
No 31
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.80 E-value=3.1e-19 Score=139.00 Aligned_cols=93 Identities=26% Similarity=0.383 Sum_probs=85.9
Q ss_pred cccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCC
Q 025648 7 HKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRT 85 (250)
Q Consensus 7 ~~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~ 85 (250)
..+.+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+
T Consensus 20 ~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~ 99 (140)
T 3hz4_A 20 VEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFKFFCHGRPVWEQVGQIY 99 (140)
T ss_dssp TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEEEEETTEEEEEEESSCC
T ss_pred HHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEEEEeCCcEEEEEcCCCC
Confidence 345689999999999999999999999999999998777777799999999999999999999999 8999999999999
Q ss_pred HHHHHHHHHHhhCC
Q 025648 86 LDSLVAFYSDVTGM 99 (250)
Q Consensus 86 ~~~l~~fi~~~~~~ 99 (250)
.++|.++|.+.++.
T Consensus 100 ~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 100 PSILKNAVRDMLQH 113 (140)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998754
No 32
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.80 E-value=5e-19 Score=131.86 Aligned_cols=92 Identities=25% Similarity=0.395 Sum_probs=84.6
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
...+++++|.||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.
T Consensus 22 ~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~ 101 (115)
T 1thx_A 22 LKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRLVKGEQILDSTEGVISK 101 (115)
T ss_dssp TTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred hcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEEEEcCCEEEEEecCCCCH
Confidence 46789999999999999999999999999999987677777799999999999999999999999 88889999999999
Q ss_pred HHHHHHHHHhhCC
Q 025648 87 DSLVAFYSDVTGM 99 (250)
Q Consensus 87 ~~l~~fi~~~~~~ 99 (250)
++|.++|++.++.
T Consensus 102 ~~l~~~l~~~l~~ 114 (115)
T 1thx_A 102 DKLLSFLDTHLNN 114 (115)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHhcC
Confidence 9999999998763
No 33
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.80 E-value=3.9e-19 Score=130.63 Aligned_cols=90 Identities=23% Similarity=0.338 Sum_probs=82.4
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
.+.+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.
T Consensus 14 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 93 (105)
T 1nsw_A 14 IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLIGYQPK 93 (105)
T ss_dssp HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEEeCCeEEEEEecCCCH
Confidence 45678999999999999999999999999999987667777789999999999999999999999 88889999999999
Q ss_pred HHHHHHHHHhh
Q 025648 87 DSLVAFYSDVT 97 (250)
Q Consensus 87 ~~l~~fi~~~~ 97 (250)
++|.++|++.+
T Consensus 94 ~~l~~~l~~~l 104 (105)
T 1nsw_A 94 EQLEAQLADVL 104 (105)
T ss_dssp HHHHHHTTTTT
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 34
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.80 E-value=4.7e-19 Score=140.79 Aligned_cols=91 Identities=22% Similarity=0.438 Sum_probs=84.5
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLD 87 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~ 87 (250)
+.+++++|+||++||++|+.+.|.|+++++.+++...+..+|++++++++++|+|+++||+++| +|+.+.++.|..+.+
T Consensus 62 ~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~ 141 (155)
T 2ppt_A 62 RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFILFHKGRELARAAGARPAS 141 (155)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHH
T ss_pred hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEEEEEeCCeEEEEecCCCCHH
Confidence 5788999999999999999999999999999987677777799999999999999999999999 899999999999999
Q ss_pred HHHHHHHHhhCC
Q 025648 88 SLVAFYSDVTGM 99 (250)
Q Consensus 88 ~l~~fi~~~~~~ 99 (250)
+|.+||++.++.
T Consensus 142 ~l~~~l~~~l~~ 153 (155)
T 2ppt_A 142 ELVGFVRGKLGA 153 (155)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHhcc
Confidence 999999998864
No 35
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.80 E-value=4.8e-19 Score=130.30 Aligned_cols=89 Identities=20% Similarity=0.338 Sum_probs=82.4
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
...+++++|.||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.
T Consensus 17 ~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 96 (107)
T 2i4a_A 17 LKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLVRDGKVIDKKVGALPK 96 (107)
T ss_dssp TTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred HhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEEEEeCCEEEEEecCCCCH
Confidence 46789999999999999999999999999999987667777789999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHh
Q 025648 87 DSLVAFYSDV 96 (250)
Q Consensus 87 ~~l~~fi~~~ 96 (250)
++|.++|+++
T Consensus 97 ~~l~~~l~~~ 106 (107)
T 2i4a_A 97 SQLKAWVESA 106 (107)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999999875
No 36
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.80 E-value=1.9e-19 Score=137.87 Aligned_cols=88 Identities=20% Similarity=0.364 Sum_probs=81.1
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
...+++++|+||++||++|+++.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|.++.
T Consensus 39 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 118 (128)
T 3ul3_B 39 NMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTMLARKDHFVSS 118 (128)
T ss_dssp TSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCH
T ss_pred HccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEEEEecCCCCH
Confidence 45789999999999999999999999999999987666677789999999999999999999999 89999999999999
Q ss_pred HHHHHHHHH
Q 025648 87 DSLVAFYSD 95 (250)
Q Consensus 87 ~~l~~fi~~ 95 (250)
++|.++|++
T Consensus 119 ~~l~~~l~~ 127 (128)
T 3ul3_B 119 NDLIALIKK 127 (128)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 999999875
No 37
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.80 E-value=5e-19 Score=138.75 Aligned_cols=92 Identities=17% Similarity=0.385 Sum_probs=85.7
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLD 87 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~ 87 (250)
..+++++|+||++||++|+.+.|.|+++++.+.+...+..+|++.+++++++|+|.++||+++| +|+.+.++.|.++.+
T Consensus 53 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~ 132 (148)
T 3p2a_A 53 QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTIMLYRNGKMIDMLNGAVPKA 132 (148)
T ss_dssp TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHH
T ss_pred hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCccCEEEEEECCeEEEEEeCCCCHH
Confidence 6789999999999999999999999999999987677777799999999999999999999999 899999999999999
Q ss_pred HHHHHHHHhhCCC
Q 025648 88 SLVAFYSDVTGMN 100 (250)
Q Consensus 88 ~l~~fi~~~~~~~ 100 (250)
+|.+||++.++..
T Consensus 133 ~l~~~l~~~l~~~ 145 (148)
T 3p2a_A 133 PFDNWLDEQLSRD 145 (148)
T ss_dssp HHHHHHHHHHHSC
T ss_pred HHHHHHHHHhccc
Confidence 9999999988754
No 38
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.80 E-value=1.1e-19 Score=141.90 Aligned_cols=91 Identities=14% Similarity=0.175 Sum_probs=84.9
Q ss_pred CCCeEEEEEEcCC--ChhHHhhhHHHHHHHHHcCCC-CEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCC
Q 025648 10 SHEYVAVLFYASW--CPFSRNFRPSFSVLSSLYSSI-PHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRT 85 (250)
Q Consensus 10 ~~~~vlV~Fya~w--C~~C~~~~p~~e~la~~~~~~-~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~ 85 (250)
.+++++|+|||+| |++|+.+.|++++++++|++. ..++.+|.|++++++.+|||+++||+++| +|+.+.+..|..+
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTlilFk~G~~v~~~~G~~~ 112 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATLVFTGGNYRGVLNGIHP 112 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEEEEETTEEEEEEESCCC
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEEEEECCEEEEEEecCCC
Confidence 6778999999999 999999999999999999988 88999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHHhhCCC
Q 025648 86 LDSLVAFYSDVTGMN 100 (250)
Q Consensus 86 ~~~l~~fi~~~~~~~ 100 (250)
.++|.++|++.+...
T Consensus 113 k~~l~~~i~~~l~~~ 127 (140)
T 2qgv_A 113 WAELINLMRGLVEPQ 127 (140)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999988544
No 39
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=2.9e-19 Score=136.61 Aligned_cols=91 Identities=23% Similarity=0.433 Sum_probs=83.3
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCce-eEEEeCCCC
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSM-RVRYHGSRT 85 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~-~~~~~G~~~ 85 (250)
.+.+++++|+||++||++|+++.|.++++++.+++...+..+|++.+++++++|+|+++||+++| +|+. +.++.|.++
T Consensus 32 ~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~~ 111 (130)
T 2dml_A 32 IQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRT 111 (130)
T ss_dssp TTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEEEEESSCTTSCEECCSCCS
T ss_pred hcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEEEEEeCCCCeEEEeecCCC
Confidence 45688999999999999999999999999999998777888899999999999999999999999 5555 889999999
Q ss_pred HHHHHHHHHHhhC
Q 025648 86 LDSLVAFYSDVTG 98 (250)
Q Consensus 86 ~~~l~~fi~~~~~ 98 (250)
.++|.+++.+.+.
T Consensus 112 ~~~l~~~l~~~l~ 124 (130)
T 2dml_A 112 GEAIVDAALSALR 124 (130)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 40
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=4.6e-19 Score=137.19 Aligned_cols=93 Identities=28% Similarity=0.517 Sum_probs=84.3
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCC---CEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCC
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI---PHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSR 84 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~---~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~ 84 (250)
..+++++|+||++||++|+++.|.|+++++.+++. +.+..+|++.+.+++++|+|.++||+++| +|+ +.+|.|.+
T Consensus 32 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~g~~ 110 (140)
T 2dj1_A 32 ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIKILKKGQ-AVDYDGSR 110 (140)
T ss_dssp TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSEEEEEETTE-EEECCSCC
T ss_pred hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCeEEEEECCc-EEEcCCCC
Confidence 45789999999999999999999999999998764 67777799999999999999999999999 777 88999999
Q ss_pred CHHHHHHHHHHhhCCCCC
Q 025648 85 TLDSLVAFYSDVTGMNTA 102 (250)
Q Consensus 85 ~~~~l~~fi~~~~~~~~~ 102 (250)
+.++|.+||.++++....
T Consensus 111 ~~~~l~~~l~~~~~~~~~ 128 (140)
T 2dj1_A 111 TQEEIVAKVREVSQPDWT 128 (140)
T ss_dssp CHHHHHHHHHHHHSSSCC
T ss_pred CHHHHHHHHHHhcCCCCC
Confidence 999999999999987654
No 41
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.80 E-value=6e-19 Score=129.50 Aligned_cols=86 Identities=23% Similarity=0.370 Sum_probs=79.3
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 88 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~ 88 (250)
.+++++|+||++||++|+.+.|.++++++.+++ ..+..+|++++++++++|+|.++||+++| +|+.+.++.|. +.++
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~-~~~~ 96 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQKVGEFSGA-NKEK 96 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEEEEEEESS-CHHH
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCeEEEEEeCC-CHHH
Confidence 689999999999999999999999999999988 55556688899999999999999999999 88999999999 9999
Q ss_pred HHHHHHHhh
Q 025648 89 LVAFYSDVT 97 (250)
Q Consensus 89 l~~fi~~~~ 97 (250)
|.++|++++
T Consensus 97 l~~~l~~~l 105 (105)
T 3m9j_A 97 LEATINELV 105 (105)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998763
No 42
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.79 E-value=1e-18 Score=129.26 Aligned_cols=88 Identities=17% Similarity=0.193 Sum_probs=78.0
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLD 87 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~ 87 (250)
..+++++|+||++||++|+++.|.++++++.+++ ..+..+|++.+++++++|+|.++||+++| +|+.+.++.|.. .+
T Consensus 19 ~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~ 96 (107)
T 1gh2_A 19 AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQ-AVFLEVDVHQCQGTAATNNISATPTFQFFRNKVRIDQYQGAD-AV 96 (107)
T ss_dssp TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEEEEEESSC-HH
T ss_pred CCCCEEEEEEECCCChhhHHHHHHHHHHHHHCCC-cEEEEEECccCHHHHHhcCCCcccEEEEEECCeEEEEEeCCC-HH
Confidence 4789999999999999999999999999999965 45556688899999999999999999999 888889999954 56
Q ss_pred HHHHHHHHhhC
Q 025648 88 SLVAFYSDVTG 98 (250)
Q Consensus 88 ~l~~fi~~~~~ 98 (250)
+|.++|++.+|
T Consensus 97 ~l~~~l~~~lg 107 (107)
T 1gh2_A 97 GLEEKIKQHLE 107 (107)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 69999998765
No 43
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.79 E-value=8e-19 Score=138.78 Aligned_cols=88 Identities=20% Similarity=0.349 Sum_probs=79.3
Q ss_pred CCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHHH
Q 025648 11 HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSL 89 (250)
Q Consensus 11 ~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~l 89 (250)
+++++|+||++||++|+++.|.++++++.++++ .+..+|++++++++++|+|.++||+++| +|+.+.++.| .+.++|
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v-~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~~l 109 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAELAKELPQV-SFVKLEAEGVPEVSEKYEISSVPTFLFFKNSQKIDRLDG-AHAPEL 109 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTS-EEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCHHHH
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHcCCe-EEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEEEEEeC-CCHHHH
Confidence 899999999999999999999999999999764 5555688899999999999999999999 8888888888 478899
Q ss_pred HHHHHHhhCCC
Q 025648 90 VAFYSDVTGMN 100 (250)
Q Consensus 90 ~~fi~~~~~~~ 100 (250)
.++|.+.++..
T Consensus 110 ~~~i~~~l~~~ 120 (153)
T 2wz9_A 110 TKKVQRHASSG 120 (153)
T ss_dssp HHHHHHHSCTT
T ss_pred HHHHHHHhccc
Confidence 99999998764
No 44
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.79 E-value=8.8e-19 Score=128.44 Aligned_cols=91 Identities=21% Similarity=0.316 Sum_probs=82.6
Q ss_pred cccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCC
Q 025648 7 HKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRT 85 (250)
Q Consensus 7 ~~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~ 85 (250)
..+.+++++|+||++||++|+.+.|.++++++.+++...+..++++.+++++++|+|.++||++++ +|+.+.++.|..+
T Consensus 14 ~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~ 93 (105)
T 1fb6_A 14 VLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVP 93 (105)
T ss_dssp TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEEECCC
T ss_pred HhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEEeCCeEEEEEecCCC
Confidence 345688999999999999999999999999999987666777789999999999999999999999 8889999999999
Q ss_pred HHHHHHHHHHhh
Q 025648 86 LDSLVAFYSDVT 97 (250)
Q Consensus 86 ~~~l~~fi~~~~ 97 (250)
.++|.++|++++
T Consensus 94 ~~~l~~~l~~~l 105 (105)
T 1fb6_A 94 KSTLTDSIEKYL 105 (105)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhC
Confidence 999999998763
No 45
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.79 E-value=8.1e-19 Score=136.09 Aligned_cols=89 Identities=19% Similarity=0.341 Sum_probs=81.4
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 88 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~ 88 (250)
.+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| .++.+.++.|..+.++
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~~ 129 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQSIPTIWFVPMKGEPQVNMGALSKEQ 129 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEECSSSCCEEEESCCCHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHHHcCCCCcCEEEEEeCCCCEEEEeCCCCHHH
Confidence 589999999999999999999999999999997677777799999999999999999999999 5555569999999999
Q ss_pred HHHHHHHhhC
Q 025648 89 LVAFYSDVTG 98 (250)
Q Consensus 89 l~~fi~~~~~ 98 (250)
|.++|++++.
T Consensus 130 l~~~l~~~l~ 139 (141)
T 3hxs_A 130 LKGYIDKVLL 139 (141)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHHc
Confidence 9999998865
No 46
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.79 E-value=1.1e-18 Score=127.17 Aligned_cols=89 Identities=25% Similarity=0.424 Sum_probs=82.8
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLD 87 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~ 87 (250)
+.+++++|+||++||++|+.+.|.++++++.+++ ..+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.+
T Consensus 14 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~ 92 (104)
T 2e0q_A 14 ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSLPTVIFFKDGEPVDEIIGAVPRE 92 (104)
T ss_dssp HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSCEEEEEETTEEEEEEESCCCHH
T ss_pred hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHHHHHhCCccccCEEEEEECCeEhhhccCCCCHH
Confidence 5678999999999999999999999999999988 66777789999999999999999999999 888889999999999
Q ss_pred HHHHHHHHhhC
Q 025648 88 SLVAFYSDVTG 98 (250)
Q Consensus 88 ~l~~fi~~~~~ 98 (250)
+|.+++++.++
T Consensus 93 ~l~~~l~~~l~ 103 (104)
T 2e0q_A 93 EIEIRIKNLLG 103 (104)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999998875
No 47
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.79 E-value=9.1e-19 Score=128.90 Aligned_cols=92 Identities=21% Similarity=0.288 Sum_probs=83.2
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
.+.+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.
T Consensus 15 ~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~ 94 (109)
T 2yzu_A 15 LGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVILFKDGQPVEVLVGAQPK 94 (109)
T ss_dssp HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEEEeCCcEeeeEeCCCCH
Confidence 35678999999999999999999999999999987667777789999999999999999999999 88888999999999
Q ss_pred HHHHHHHHHhhCC
Q 025648 87 DSLVAFYSDVTGM 99 (250)
Q Consensus 87 ~~l~~fi~~~~~~ 99 (250)
++|.++|.+.++.
T Consensus 95 ~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 95 RNYQAKIEKHLPA 107 (109)
T ss_dssp HHHHHHHHTTC--
T ss_pred HHHHHHHHHHhhh
Confidence 9999999988754
No 48
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.79 E-value=1.4e-18 Score=131.27 Aligned_cols=88 Identities=22% Similarity=0.375 Sum_probs=81.2
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 88 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~ 88 (250)
.+++++|+||++||++|+.+.|.++++++.+++ ..+..+|++.+++++++|+|.++||++++ +|+.+.++.|.. .++
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~ 110 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAI-KEE 110 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESSC-HHH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHcCCCcccEEEEEeCCEEEEEEeCcC-HHH
Confidence 688999999999999999999999999999988 56666788999999999999999999999 888899999999 999
Q ss_pred HHHHHHHhhCC
Q 025648 89 LVAFYSDVTGM 99 (250)
Q Consensus 89 l~~fi~~~~~~ 99 (250)
|.++|+++++.
T Consensus 111 l~~~l~~~l~~ 121 (122)
T 2vlu_A 111 LTAKVGLHAAA 121 (122)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHhcc
Confidence 99999998753
No 49
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.79 E-value=1.3e-18 Score=129.38 Aligned_cols=87 Identities=22% Similarity=0.368 Sum_probs=80.1
Q ss_pred CCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHHH
Q 025648 11 HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSL 89 (250)
Q Consensus 11 ~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~l 89 (250)
+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||++++ +|+.+.++.|. +.++|
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l 102 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGA-SQDKL 102 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEEEEEETTEEEEEEESC-CHHHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEEEEEECCeEEEEEcCC-CHHHH
Confidence 78999999999999999999999999999986566677788999999999999999999999 88888999998 99999
Q ss_pred HHHHHHhhC
Q 025648 90 VAFYSDVTG 98 (250)
Q Consensus 90 ~~fi~~~~~ 98 (250)
.++|++++.
T Consensus 103 ~~~l~~~l~ 111 (112)
T 1ep7_A 103 KALVAKHAA 111 (112)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 999998764
No 50
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.79 E-value=1.1e-18 Score=129.23 Aligned_cols=86 Identities=30% Similarity=0.486 Sum_probs=78.8
Q ss_pred CCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC---CCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 11 HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS---IPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 11 ~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~---~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
+++++|+||++||++|+.+.|.++++++.+.. ...+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~ 100 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLLFRGGKKVSEHSGGRDL 100 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEECSCCSH
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEEEEeCCcEEEeccCCcCH
Confidence 77999999999999999999999999998752 456667789999999999999999999999 89899999999999
Q ss_pred HHHHHHHHHh
Q 025648 87 DSLVAFYSDV 96 (250)
Q Consensus 87 ~~l~~fi~~~ 96 (250)
++|.+||.++
T Consensus 101 ~~l~~~l~~~ 110 (111)
T 3uvt_A 101 DSLHRFVLSQ 110 (111)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999999875
No 51
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.78 E-value=3.1e-18 Score=132.53 Aligned_cols=92 Identities=14% Similarity=0.286 Sum_probs=82.9
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE--eCceeEEEeCCCCH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTL 86 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~--~g~~~~~~~G~~~~ 86 (250)
..+++++|+||++||++|+++.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+ ++.|..+.
T Consensus 36 ~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~G~~~-~~~G~~~~ 114 (136)
T 2l5l_A 36 EGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKPE-MAQGAMPK 114 (136)
T ss_dssp CCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSCEEEEECSSSCCE-EEESCCCH
T ss_pred cCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHcCCCCCCEEEEECCCCcEE-EEeCCCCH
Confidence 3678999999999999999999999999999987677777799999999999999999999999 55554 89999999
Q ss_pred HHHHHHHHHhhCCCC
Q 025648 87 DSLVAFYSDVTGMNT 101 (250)
Q Consensus 87 ~~l~~fi~~~~~~~~ 101 (250)
++|.++|++.++...
T Consensus 115 ~~l~~~l~~~~~~~~ 129 (136)
T 2l5l_A 115 ASFKKAIDEFLLKKE 129 (136)
T ss_dssp HHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHhhccC
Confidence 999999999987654
No 52
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.78 E-value=7e-19 Score=138.95 Aligned_cols=89 Identities=11% Similarity=0.159 Sum_probs=82.1
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCcee---------E
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMR---------V 78 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~---------~ 78 (250)
+.+++++|+|||+||++|+.+.|.++++++.+++...+..+|++++++++++|+|.++||++++ +|+.+ .
T Consensus 21 ~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~g~~~~~ 100 (149)
T 3gix_A 21 TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHT 100 (149)
T ss_dssp CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEEEEECSSSCCS
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCeEEEeecCCCCCC
Confidence 5689999999999999999999999999999988667777789999999999999999999988 88888 8
Q ss_pred EEeC-CCCHHHHHHHHHHhh
Q 025648 79 RYHG-SRTLDSLVAFYSDVT 97 (250)
Q Consensus 79 ~~~G-~~~~~~l~~fi~~~~ 97 (250)
++.| ..+.++|.++|+...
T Consensus 101 ~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 101 KFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp CEESCCSSHHHHHHHHHHHH
T ss_pred eEeeecCCHHHHHHHHHHHH
Confidence 9999 899999999999874
No 53
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.78 E-value=9.5e-19 Score=131.81 Aligned_cols=91 Identities=23% Similarity=0.335 Sum_probs=83.2
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
.+.+++++|+||++||++|+.+.|.++++++.+++...+..++++.+++++++|+|.++||+++| +|+.+.++.|..+.
T Consensus 27 ~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~G~~~~ 106 (121)
T 2i1u_A 27 LSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGK 106 (121)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEEEEEECCEEEEEecCCCCH
Confidence 45688999999999999999999999999999987667777799999999999999999999999 88889999999999
Q ss_pred HHHHHHHHHhhC
Q 025648 87 DSLVAFYSDVTG 98 (250)
Q Consensus 87 ~~l~~fi~~~~~ 98 (250)
++|.++|.+.++
T Consensus 107 ~~l~~~l~~~l~ 118 (121)
T 2i1u_A 107 AALLRELSDVVP 118 (121)
T ss_dssp HHHHHHTCSCCC
T ss_pred HHHHHHHHHHHh
Confidence 999999987654
No 54
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.78 E-value=7.9e-19 Score=145.86 Aligned_cols=97 Identities=24% Similarity=0.422 Sum_probs=89.6
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLD 87 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~ 87 (250)
..+++++|+||++||++|+.+.|.|+++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|.++.+
T Consensus 112 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~ 191 (210)
T 3apq_A 112 NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYNGDRSKE 191 (210)
T ss_dssp HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEECTTSCCEECCSCCCHH
T ss_pred ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeEEEEECCCceeEecCCCCHH
Confidence 5678999999999999999999999999999988778888899999999999999999999999 898999999999999
Q ss_pred HHHHHHHHhhCCCCCCCC
Q 025648 88 SLVAFYSDVTGMNTASLD 105 (250)
Q Consensus 88 ~l~~fi~~~~~~~~~~l~ 105 (250)
+|.+||.+.++..+.+++
T Consensus 192 ~l~~~i~~~l~~~~~~i~ 209 (210)
T 3apq_A 192 SLVAFAMQHVRSTVTELS 209 (210)
T ss_dssp HHHHHHHHHHHCCSSCC-
T ss_pred HHHHHHHHhCcccceecC
Confidence 999999999988776654
No 55
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.78 E-value=2.2e-18 Score=131.19 Aligned_cols=95 Identities=12% Similarity=0.142 Sum_probs=84.0
Q ss_pred cccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEc--CCCChhHHHhhCCCccCeEEEE--eCceeEEEeC
Q 025648 7 HKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEE--SAIRPSILSKYGVHGFPTLFLL--NSSMRVRYHG 82 (250)
Q Consensus 7 ~~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d--~~~~~~l~~~~~I~~~PTi~l~--~g~~~~~~~G 82 (250)
....+++++|+||++||++|+.+.|.++++++.+++...+..++ ++.+++++++|+|.++||+++| +|+.+.++.|
T Consensus 22 ~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G 101 (126)
T 2l57_A 22 EAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQG 101 (126)
T ss_dssp TCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEES
T ss_pred HHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecC
Confidence 34577899999999999999999999999999996545555667 8888999999999999999999 6888889999
Q ss_pred CCCHHHHHHHHHHhhCCCC
Q 025648 83 SRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 83 ~~~~~~l~~fi~~~~~~~~ 101 (250)
..+.++|.++|++.++...
T Consensus 102 ~~~~~~l~~~l~~~~~~~~ 120 (126)
T 2l57_A 102 LMRKNNIETILNSLGVKEG 120 (126)
T ss_dssp CCCHHHHHHHHHHHCCCCC
T ss_pred CCCHHHHHHHHHHHhcccc
Confidence 9999999999999987654
No 56
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.78 E-value=5.4e-19 Score=164.89 Aligned_cols=134 Identities=19% Similarity=0.348 Sum_probs=107.5
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCC-CEEEEEcCCCChhHHHhhCCCccCeEEEE-eCce--eEEEeCC
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI-PHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSM--RVRYHGS 83 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~-~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~--~~~~~G~ 83 (250)
.+.+++++|+||||||++|+++.|.|+++++.+++. +.++.+||+.++++|++|+|+++||+++| +|+. +.+|.|.
T Consensus 28 ~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~ 107 (504)
T 2b5e_A 28 IQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGP 107 (504)
T ss_dssp HTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTCTTCEEECCSC
T ss_pred HhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCEEEEEeCCccccceeecCC
Confidence 356789999999999999999999999999999885 78888899999999999999999999999 7776 8999999
Q ss_pred CCHHHHHHHHHHhhCCCCCCCCCCCccccCCCCCc-ccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 84 RTLDSLVAFYSDVTGMNTASLDKISPDKVGKASNH-EKHNNTEEESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 84 ~~~~~l~~fi~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
++.+.|.+|+.+.+++.+..++. ++.++..... ...+.++ ....... .+.|.++|..|
T Consensus 108 ~~~~~l~~~l~~~~~~~v~~i~~--~~~~~~~~~~~~~~v~~f--------~~~~~~~--~~~f~~~A~~~ 166 (504)
T 2b5e_A 108 RTAEAIVQFMIKQSQPAVAVVAD--LPAYLANETFVTPVIVQS--------GKIDADF--NATFYSMANKH 166 (504)
T ss_dssp CSHHHHHHHHHHHTSCSEEECSC--HHHHHHHSCCSSCEEEEE--------ESCCHHH--HHHHHHHHHHT
T ss_pred CCHHHHHHHHHHhcCCcceeHHH--HHHHHhcCCCceEEEEEe--------CCCCchH--HHHHHHHHHHh
Confidence 99999999999999988777765 6666543220 1111111 1122334 67788888886
No 57
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.78 E-value=1.6e-19 Score=169.37 Aligned_cols=95 Identities=21% Similarity=0.337 Sum_probs=82.1
Q ss_pred cccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC---CCEEEEEcCC--CChhHHHhhCCCccCeEEEE-e----Cce
Q 025648 7 HKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS---IPHFAIEESA--IRPSILSKYGVHGFPTLFLL-N----SSM 76 (250)
Q Consensus 7 ~~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~---~~~v~~~d~~--~~~~l~~~~~I~~~PTi~l~-~----g~~ 76 (250)
..+.+++++|+|||+||++|+++.|.|+++++.+++ .+.+..+||+ +++++|++|+|+++||+++| + |+.
T Consensus 26 v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~g~~~G~~ 105 (519)
T 3t58_A 26 VLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFTKNGSG 105 (519)
T ss_dssp HSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECTTCCSCCC
T ss_pred HHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcCcccCCCc
Confidence 346679999999999999999999999999999986 5677777884 48999999999999999999 3 234
Q ss_pred eEEEeCCCCHHHHHHHHHHhhCCCC
Q 025648 77 RVRYHGSRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 77 ~~~~~G~~~~~~l~~fi~~~~~~~~ 101 (250)
...+.|.++.++|.++|.+.+....
T Consensus 106 ~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 106 ATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp EEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred eeEecCCCCHHHHHHHHHHHHhhcc
Confidence 5778889999999999999987544
No 58
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.77 E-value=3.3e-18 Score=127.25 Aligned_cols=86 Identities=17% Similarity=0.369 Sum_probs=76.5
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCC-CChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA-IRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLD 87 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~-~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~ 87 (250)
.+++++|+||++||++|+.+.|.++++++.++++.++ .+|++ .+++++++|+|+++||++++ +|+.+.++.|.. .+
T Consensus 23 ~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~-~vd~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~ 100 (111)
T 2pu9_C 23 GDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFL-KLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAK-YD 100 (111)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEE-EEECSSTTHHHHHHHCCSBSSEEEEESSSSEEEEEESSC-HH
T ss_pred CCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCCeEEE-EEecCcchHHHHHHcCCCeeeEEEEEeCCcEEEEEcCCC-HH
Confidence 6889999999999999999999999999999885444 44666 78999999999999998888 899889999985 89
Q ss_pred HHHHHHHHhh
Q 025648 88 SLVAFYSDVT 97 (250)
Q Consensus 88 ~l~~fi~~~~ 97 (250)
+|.++|++.+
T Consensus 101 ~l~~~l~~~~ 110 (111)
T 2pu9_C 101 KLLEAIQAAR 110 (111)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998875
No 59
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.77 E-value=1.1e-18 Score=131.95 Aligned_cols=92 Identities=20% Similarity=0.349 Sum_probs=82.6
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCC---
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGS--- 83 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~--- 83 (250)
.+.+++++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|.
T Consensus 18 ~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~g~~~~ 97 (122)
T 3aps_A 18 LQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKSIWEEQIN 97 (122)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEEGGGTEEEEEEEC
T ss_pred hcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEEEEeCCCccceeeccccC
Confidence 45788999999999999999999999999999987667777799999999999999999999999 66667778775
Q ss_pred -CCHHHHHHHHHHhhCC
Q 025648 84 -RTLDSLVAFYSDVTGM 99 (250)
Q Consensus 84 -~~~~~l~~fi~~~~~~ 99 (250)
++.++|.++|.+.+..
T Consensus 98 ~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 98 SRDAKTIAALIYGKLET 114 (122)
T ss_dssp CSCHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHh
Confidence 8999999999998754
No 60
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.77 E-value=1.6e-18 Score=129.43 Aligned_cols=90 Identities=18% Similarity=0.380 Sum_probs=79.1
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLD 87 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~ 87 (250)
..+++++|+||++||++|+.+.|.++++++.++++.+ ..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.+
T Consensus 17 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~-~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~ 95 (110)
T 2l6c_A 17 EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQVAI-SSVDSEARPELMKELGFERVPTLVFIRDGKVAKVFSGIMNPR 95 (110)
T ss_dssp TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTTSCE-EEEEGGGCHHHHHHTTCCSSCEEEEEESSSEEEEEESCCCHH
T ss_pred HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCCcEE-EEEcCcCCHHHHHHcCCcccCEEEEEECCEEEEEEcCCCCHH
Confidence 4568999999999999999999999999999986544 44577889999999999999999999 999999999999999
Q ss_pred HHHHHHHHhhCC
Q 025648 88 SLVAFYSDVTGM 99 (250)
Q Consensus 88 ~l~~fi~~~~~~ 99 (250)
+|.+++.+..+.
T Consensus 96 ~l~~~~~~~~~~ 107 (110)
T 2l6c_A 96 ELQALYASIHHH 107 (110)
T ss_dssp HHHHHHHTC---
T ss_pred HHHHHHHHHhhh
Confidence 999999987654
No 61
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.77 E-value=1.8e-18 Score=145.07 Aligned_cols=95 Identities=22% Similarity=0.375 Sum_probs=87.4
Q ss_pred cccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCC
Q 025648 7 HKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRT 85 (250)
Q Consensus 7 ~~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~ 85 (250)
..+.+++++|+|||+||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|.++
T Consensus 26 v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~ 105 (222)
T 3dxb_A 26 VLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALS 105 (222)
T ss_dssp HTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSEEEEEETTEEEEEEESCCC
T ss_pred HHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCEEEEEECCeEEEEeccccC
Confidence 356789999999999999999999999999999998677777799999999999999999999999 8889999999999
Q ss_pred HHHHHHHHHHhhCCCC
Q 025648 86 LDSLVAFYSDVTGMNT 101 (250)
Q Consensus 86 ~~~l~~fi~~~~~~~~ 101 (250)
.++|.++|++.+....
T Consensus 106 ~~~l~~~l~~~l~~~~ 121 (222)
T 3dxb_A 106 KGQLKEFLDANLAGSA 121 (222)
T ss_dssp HHHHHHHHHHHSCCSC
T ss_pred hHHHHHHHHhhccccc
Confidence 9999999999987543
No 62
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.77 E-value=2.7e-18 Score=131.54 Aligned_cols=88 Identities=18% Similarity=0.278 Sum_probs=79.8
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLD 87 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~ 87 (250)
+.+++++|+||++||++|+.+.|.++++++.+++ ..+..+|++++++++++|+|.++||+++| +|+.+.++.| .+.+
T Consensus 35 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~~~G~~~~~~~G-~~~~ 112 (125)
T 1r26_A 35 SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPT-VKFAKVDADNNSEIVSKCRVLQLPTFIIARSGKMLGHVIG-ANPG 112 (125)
T ss_dssp HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCHH
T ss_pred ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCCcccEEEEEeCCeEEEEEeC-CCHH
Confidence 5788999999999999999999999999999976 45566688999999999999999999999 8888899999 7899
Q ss_pred HHHHHHHHhhC
Q 025648 88 SLVAFYSDVTG 98 (250)
Q Consensus 88 ~l~~fi~~~~~ 98 (250)
+|.++|++.++
T Consensus 113 ~l~~~l~~~l~ 123 (125)
T 1r26_A 113 MLRQKLRDIIK 123 (125)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999998764
No 63
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.77 E-value=2.3e-18 Score=129.60 Aligned_cols=86 Identities=21% Similarity=0.380 Sum_probs=78.4
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
.+.+++++|+||++||++|+++.|.++++++.+++ ..+..+|++.+++++++|+|.++||++++ +|+.+.++.|.. .
T Consensus 27 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~ 104 (114)
T 2oe3_A 27 IKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQLIGKIIGAN-P 104 (114)
T ss_dssp HHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEEEEEEESSC-H
T ss_pred HhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHCCCCcccEEEEEeCCeEEEEEeCCC-H
Confidence 34678999999999999999999999999999988 56666688899999999999999999999 888899999988 9
Q ss_pred HHHHHHHHH
Q 025648 87 DSLVAFYSD 95 (250)
Q Consensus 87 ~~l~~fi~~ 95 (250)
++|.++|++
T Consensus 105 ~~l~~~l~~ 113 (114)
T 2oe3_A 105 TALEKGIKD 113 (114)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999999875
No 64
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.77 E-value=2.6e-18 Score=139.58 Aligned_cols=102 Identities=9% Similarity=0.231 Sum_probs=85.1
Q ss_pred cCCCeEEEEEEc-------CCChhHHhhhHHHHHHHHHcC-----CCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCc
Q 025648 9 NSHEYVAVLFYA-------SWCPFSRNFRPSFSVLSSLYS-----SIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSS 75 (250)
Q Consensus 9 ~~~~~vlV~Fya-------~wC~~C~~~~p~~e~la~~~~-----~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~ 75 (250)
..+.+++|+||| +||++|+.+.|+|+++++.|. +.+.++.+|.+++++++++|||+++||+++| +|+
T Consensus 35 ~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~~~~I~siPtl~~F~~g~ 114 (178)
T 3ga4_A 35 VPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVKDLKLQNVPHLVVYPPAE 114 (178)
T ss_dssp CTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHHHTTCCSSCEEEEECCCC
T ss_pred cCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHHHcCCCCCCEEEEEcCCC
Confidence 346789999999 499999999999999999987 6778888999999999999999999999999 553
Q ss_pred -ee-----------EEE---eC-CCCHHHHHHHHHHhhCCCCCCCCCCCcc
Q 025648 76 -MR-----------VRY---HG-SRTLDSLVAFYSDVTGMNTASLDKISPD 110 (250)
Q Consensus 76 -~~-----------~~~---~G-~~~~~~l~~fi~~~~~~~~~~l~~~~~~ 110 (250)
.. .+| .| +++++.|.+||.+.++..+....+.+..
T Consensus 115 ~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~rp~ny~ 165 (178)
T 3ga4_A 115 SNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITVPQAFNVQ 165 (178)
T ss_dssp GGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCCCSCC--
T ss_pred CCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCccccCCCChH
Confidence 22 456 35 8999999999999999877554444443
No 65
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=1.6e-18 Score=131.97 Aligned_cols=90 Identities=22% Similarity=0.477 Sum_probs=79.9
Q ss_pred eEEEEEEcCCChhHHhhhHHHHHHHHHcCC-CCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHHHH
Q 025648 13 YVAVLFYASWCPFSRNFRPSFSVLSSLYSS-IPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSLV 90 (250)
Q Consensus 13 ~vlV~Fya~wC~~C~~~~p~~e~la~~~~~-~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~l~ 90 (250)
.++|+|||+||++|+++.|.++++++.+++ ...+..+|++++++++++|+|.++||+++| +|+ +.++.|.++.++|.
T Consensus 24 ~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~G~~~~~~l~ 102 (126)
T 1x5e_A 24 DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYHCKDGE-FRRYQGPRTKKDFI 102 (126)
T ss_dssp EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE-EEECCSCCCHHHHH
T ss_pred CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEEEeCCe-EEEeecCCCHHHHH
Confidence 499999999999999999999999999875 456667789999999999999999999999 666 68999999999999
Q ss_pred HHHHHhhCCCCCC
Q 025648 91 AFYSDVTGMNTAS 103 (250)
Q Consensus 91 ~fi~~~~~~~~~~ 103 (250)
+||.+.++.....
T Consensus 103 ~~l~~~~~~~~~~ 115 (126)
T 1x5e_A 103 NFISDKEWKSIEP 115 (126)
T ss_dssp HHHHTCGGGGSCE
T ss_pred HHHHHHhhccCCC
Confidence 9999988655433
No 66
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.77 E-value=7.1e-19 Score=131.69 Aligned_cols=92 Identities=25% Similarity=0.557 Sum_probs=81.7
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC---CCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCcee--EEEeC
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS---IPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMR--VRYHG 82 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~---~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~--~~~~G 82 (250)
..+++++|+||++||++|+++.|.++++++.+++ ...+..+|++.+++++++|+|.++||+++| +|+.+ .++.|
T Consensus 22 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~g 101 (120)
T 1mek_A 22 AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTA 101 (120)
T ss_dssp HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEEEEEESSCSSSCEECCC
T ss_pred ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEEEEEeCCCcCCcccccC
Confidence 4678999999999999999999999999999863 345566688888999999999999999999 88876 89999
Q ss_pred CCCHHHHHHHHHHhhCCC
Q 025648 83 SRTLDSLVAFYSDVTGMN 100 (250)
Q Consensus 83 ~~~~~~l~~fi~~~~~~~ 100 (250)
.++.++|.+||++.++..
T Consensus 102 ~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 102 GREADDIVNWLKKRTGPA 119 (120)
T ss_dssp CSSHHHHHHHHHTTSCCC
T ss_pred ccCHHHHHHHHHhccCCC
Confidence 999999999999988754
No 67
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.77 E-value=5.1e-18 Score=124.53 Aligned_cols=86 Identities=20% Similarity=0.336 Sum_probs=78.5
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 88 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~ 88 (250)
.+++++|.||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||++++ +|+.+.++.| .+.++
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g-~~~~~ 97 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAG-ANAKR 97 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEES-CCHHH
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEEcCCcEEEEEcC-CCHHH
Confidence 688999999999999999999999999999965566667788999999999999999999999 8888899999 78999
Q ss_pred HHHHHHHh
Q 025648 89 LVAFYSDV 96 (250)
Q Consensus 89 l~~fi~~~ 96 (250)
|.++|+++
T Consensus 98 l~~~i~~~ 105 (106)
T 1xwb_A 98 LEDVIKAN 105 (106)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99999875
No 68
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.76 E-value=5.3e-18 Score=126.60 Aligned_cols=87 Identities=21% Similarity=0.324 Sum_probs=78.8
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLD 87 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~ 87 (250)
+.+++++|+||++||++|+++.|.++++++.+++ ..+..+|++.+++++++|+|.++||++++ +|+.+.++.|. +.+
T Consensus 24 ~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~ 101 (112)
T 1syr_A 24 SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK-MVFIKVDVDEVSEVTEKENITSMPTFKVYKNGSSVDTLLGA-NDS 101 (112)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTTHHHHHHTTCCSSSEEEEEETTEEEEEEESC-CHH
T ss_pred ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CEEEEEECCCCHHHHHHcCCCcccEEEEEECCcEEEEEeCC-CHH
Confidence 4688999999999999999999999999999987 45555688889999999999999999999 88888999999 999
Q ss_pred HHHHHHHHhh
Q 025648 88 SLVAFYSDVT 97 (250)
Q Consensus 88 ~l~~fi~~~~ 97 (250)
+|.++|++.+
T Consensus 102 ~l~~~l~~~l 111 (112)
T 1syr_A 102 ALKQLIEKYA 111 (112)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 69
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.76 E-value=7.2e-19 Score=134.30 Aligned_cols=91 Identities=23% Similarity=0.406 Sum_probs=77.9
Q ss_pred ccCCCeEEEEEEcCCCh--------------hHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-
Q 025648 8 KNSHEYVAVLFYASWCP--------------FSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL- 72 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~--------------~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~- 72 (250)
.+.+++++|+|||+||+ +|+.+.|.++++++.+++...+..+|++.+++++++|+|+++||+++|
T Consensus 18 ~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~ 97 (123)
T 1oaz_A 18 LKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 97 (123)
T ss_dssp TSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTGGGGTCCBSSEEEEEE
T ss_pred HhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEEE
Confidence 56789999999999999 999999999999999987677777799999999999999999999999
Q ss_pred eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 73 NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 73 ~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
+|+.+.++.|.++.++|.++|++.++
T Consensus 98 ~G~~~~~~~G~~~~~~l~~~l~~~l~ 123 (123)
T 1oaz_A 98 NGEVAATKVGALSKGQLKEFLDANLA 123 (123)
T ss_dssp SSSEEEEEESCCCHHHHHHHHTTTCC
T ss_pred CCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 89999999999999999999987653
No 70
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.76 E-value=6.9e-18 Score=131.02 Aligned_cols=90 Identities=20% Similarity=0.294 Sum_probs=81.5
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
.+.++ ++|+||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.
T Consensus 48 ~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 126 (140)
T 1v98_A 48 AGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTLVLFRRGAPVATWVGASPR 126 (140)
T ss_dssp -CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred HcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCccCEEEEEeCCcEEEEEeCCCCH
Confidence 34445 99999999999999999999999999987667777789999999999999999999999 88889999999999
Q ss_pred HHHHHHHHHhhC
Q 025648 87 DSLVAFYSDVTG 98 (250)
Q Consensus 87 ~~l~~fi~~~~~ 98 (250)
++|.+||.+.++
T Consensus 127 ~~l~~~i~~~l~ 138 (140)
T 1v98_A 127 RVLEERLRPYLE 138 (140)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 999999999875
No 71
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.76 E-value=2.7e-18 Score=148.62 Aligned_cols=90 Identities=17% Similarity=0.315 Sum_probs=84.3
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLD 87 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~ 87 (250)
+.+++|+|+||++||++|+.+.|.++++++.+++...+..+|++++++++++|+|+++||+++| +|+.+.++.|..+.+
T Consensus 24 ~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~ 103 (287)
T 3qou_A 24 SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEE 103 (287)
T ss_dssp TTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEEEEEETTEEEEEEESCCCHH
T ss_pred cCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeEEEEECCEEEEEeeCCCCHH
Confidence 3589999999999999999999999999999998777778899999999999999999999999 898999999999999
Q ss_pred HHHHHHHHhhC
Q 025648 88 SLVAFYSDVTG 98 (250)
Q Consensus 88 ~l~~fi~~~~~ 98 (250)
.+.+++...++
T Consensus 104 ~l~~~l~~~lp 114 (287)
T 3qou_A 104 AIRALLDXVLP 114 (287)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHHcC
Confidence 99999999874
No 72
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.76 E-value=5.8e-18 Score=128.39 Aligned_cols=87 Identities=16% Similarity=0.383 Sum_probs=76.9
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCC-CChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA-IRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~-~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
..+++++|+||++||++|+++.|.++++++.++++..+.+ |++ .+++++++|+|+++||++++ +|+.+.++.|.. .
T Consensus 35 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~v-d~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~ 112 (124)
T 1faa_A 35 AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKL-DCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAK-Y 112 (124)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEE-ECSSTTHHHHHHHCCSSSSEEEEEETTEEEEEEESSC-H
T ss_pred cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCCCEEEEE-ecCcchHHHHHHcCCCeeeEEEEEeCCcEEEEEcCCC-H
Confidence 3688999999999999999999999999999988555444 665 68999999999999999988 888888999986 8
Q ss_pred HHHHHHHHHhh
Q 025648 87 DSLVAFYSDVT 97 (250)
Q Consensus 87 ~~l~~fi~~~~ 97 (250)
++|.++|++..
T Consensus 113 ~~l~~~i~~~~ 123 (124)
T 1faa_A 113 DKLLEAIQAAR 123 (124)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 99999998864
No 73
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.76 E-value=1.4e-18 Score=133.33 Aligned_cols=95 Identities=22% Similarity=0.511 Sum_probs=80.8
Q ss_pred ccccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCce--eEEE
Q 025648 6 VHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSM--RVRY 80 (250)
Q Consensus 6 ~~~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~--~~~~ 80 (250)
...+.+++++|+||++||++|+.+.|.|+++++.+++ ...+..+|++.++.++++|+|.++||+++| +|+. ...|
T Consensus 20 ~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~ 99 (133)
T 2dj3_A 20 IVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTIYFAPSGDKKNPIKF 99 (133)
T ss_dssp CCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEEEEECTTCTTSCEEC
T ss_pred HhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEEEEEeCCCcccceEe
Confidence 3344689999999999999999999999999999973 456667789889999999999999999999 5543 3467
Q ss_pred e-CCCCHHHHHHHHHHhhCCC
Q 025648 81 H-GSRTLDSLVAFYSDVTGMN 100 (250)
Q Consensus 81 ~-G~~~~~~l~~fi~~~~~~~ 100 (250)
. |.++.++|.+||.+.++..
T Consensus 100 ~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 100 EGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp CSSCCSTTHHHHHHHHHSSSC
T ss_pred cCCCcCHHHHHHHHHHhcccc
Confidence 7 5589999999999998755
No 74
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.76 E-value=9.1e-18 Score=122.75 Aligned_cols=86 Identities=22% Similarity=0.388 Sum_probs=77.6
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 88 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~ 88 (250)
.+++++|.||++||++|+.+.|.++++++.+++ ..+..+|++.+++++++|+|.++||++++ +|+.+.++.| .+.++
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G-~~~~~ 95 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPE-VEFAKVDVDQNEEAAAKYSVTAMPTFVFIKDGKEVDRFSG-ANETK 95 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCHHH
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCCC-CEEEEEeccCCHHHHHHcCCccccEEEEEeCCcEEEEEeC-CCHHH
Confidence 788999999999999999999999999999985 45555688899999999999999999999 8888899999 68999
Q ss_pred HHHHHHHhh
Q 025648 89 LVAFYSDVT 97 (250)
Q Consensus 89 l~~fi~~~~ 97 (250)
|.++|++++
T Consensus 96 l~~~l~~~l 104 (104)
T 2vim_A 96 LRETITRHK 104 (104)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhhC
Confidence 999998763
No 75
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.76 E-value=7.6e-18 Score=126.60 Aligned_cols=85 Identities=21% Similarity=0.396 Sum_probs=76.5
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 88 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~ 88 (250)
.+++++|+||++||++|+++.|.++++++.+ + ..+..+|++.+++++++|+|.++||++++ +|+.+.++.| .+.++
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~~ 108 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY-D-AIFVKVDVDKLEETARKYNISAMPTFIAIKNGEKVGDVVG-ASIAK 108 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-S-SEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCHHH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-C-cEEEEEECCccHHHHHHcCCCccceEEEEeCCcEEEEEeC-CCHHH
Confidence 6889999999999999999999999999998 4 45556688899999999999999999999 8888899999 68999
Q ss_pred HHHHHHHhh
Q 025648 89 LVAFYSDVT 97 (250)
Q Consensus 89 l~~fi~~~~ 97 (250)
|.++|++++
T Consensus 109 l~~~l~~~l 117 (117)
T 2xc2_A 109 VEDMIKKFI 117 (117)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998763
No 76
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.75 E-value=2.5e-18 Score=129.57 Aligned_cols=89 Identities=27% Similarity=0.553 Sum_probs=76.9
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC-----CCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCce--eEE
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS-----IPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSM--RVR 79 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~-----~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~--~~~ 79 (250)
...+++++|+|||+||++|+++.|.|+++++.+++ ...+..+|++.++ +++ +|.++||+++| +|+. +.+
T Consensus 22 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~~Pt~~~~~~~~~~~~~~ 98 (121)
T 2djj_A 22 LDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQGFPTIKLYPAGAKGQPVT 98 (121)
T ss_dssp SCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSSSSEEEEECSSCTTSCCC
T ss_pred hcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCcCCeEEEEeCcCCCCceE
Confidence 46789999999999999999999999999999986 5667777887665 555 99999999999 5544 788
Q ss_pred EeCCCCHHHHHHHHHHhhCC
Q 025648 80 YHGSRTLDSLVAFYSDVTGM 99 (250)
Q Consensus 80 ~~G~~~~~~l~~fi~~~~~~ 99 (250)
+.|.++.++|.+||.++++.
T Consensus 99 ~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 99 YSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp CCCCSCHHHHHHHHHHTSSS
T ss_pred ecCCCCHHHHHHHHHhccCc
Confidence 99999999999999998764
No 77
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.75 E-value=8.3e-18 Score=125.14 Aligned_cols=88 Identities=14% Similarity=0.324 Sum_probs=74.9
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHH--cCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCC
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSL--YSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRT 85 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~--~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~ 85 (250)
..+++++|+||++||++|+.+.|.++++++. +++ ..+..+|++.+++++++|+|.++||+++| +|+.+.++.|..
T Consensus 19 ~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~- 96 (112)
T 3d6i_A 19 AGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSN-VSFLSIDADENSEISELFEISAVPYFIIIHKGTILKELSGAD- 96 (112)
T ss_dssp TTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEECSCC-
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCC-EEEEEEecccCHHHHHHcCCCcccEEEEEECCEEEEEecCCC-
Confidence 4589999999999999999999999999998 445 55666688899999999999999999999 888889999974
Q ss_pred HHHHHHHHHHhhC
Q 025648 86 LDSLVAFYSDVTG 98 (250)
Q Consensus 86 ~~~l~~fi~~~~~ 98 (250)
.++|.++|++.++
T Consensus 97 ~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 97 PKEYVSLLEDCKN 109 (112)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 5679999988763
No 78
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.75 E-value=7.3e-18 Score=130.47 Aligned_cols=89 Identities=21% Similarity=0.340 Sum_probs=80.2
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 88 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~ 88 (250)
.+++++|+||++||++|+.+.|.++++++.++++ .+..+|++.+++++++|+|.++||++++ +|+.+.++.|. +.++
T Consensus 45 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v-~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~ 122 (139)
T 3d22_A 45 DGKIVLANFSARWCGPSRQIAPYYIELSENYPSL-MFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGA-NKPE 122 (139)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTS-EEEEEETTTSHHHHHHTTCCEESEEEEEETTEEEEEEESC-CHHH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCC-EEEEEeCcccHHHHHHcCCCcccEEEEEcCCeEEEEEeCC-CHHH
Confidence 5789999999999999999999999999999765 4555588899999999999999999999 89999999998 8999
Q ss_pred HHHHHHHhhCCC
Q 025648 89 LVAFYSDVTGMN 100 (250)
Q Consensus 89 l~~fi~~~~~~~ 100 (250)
|.++|.+.++..
T Consensus 123 l~~~l~~~~~~~ 134 (139)
T 3d22_A 123 LHKKITAILDSL 134 (139)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHhccC
Confidence 999999987643
No 79
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.75 E-value=1.4e-17 Score=127.17 Aligned_cols=86 Identities=24% Similarity=0.378 Sum_probs=77.4
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 88 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~ 88 (250)
.+++++|+||++||++|+.+.|.++++++.++++ .+..+|++++++++++|+|.++||++++ +|+.+.++.| .+.++
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v-~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~~ 114 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNV-LFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVG-AKKDE 114 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCSSE-EEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEEEEEES-CCHHH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCc-EEEEEECccCHHHHHHcCCCccCEEEEEECCEEEEEEeC-CCHHH
Confidence 5889999999999999999999999999999854 4455588889999999999999999999 8888899999 58999
Q ss_pred HHHHHHHhh
Q 025648 89 LVAFYSDVT 97 (250)
Q Consensus 89 l~~fi~~~~ 97 (250)
|.++|++.+
T Consensus 115 l~~~l~~~l 123 (124)
T 1xfl_A 115 LQSTIAKHL 123 (124)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 999998865
No 80
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.75 E-value=1.5e-18 Score=130.77 Aligned_cols=86 Identities=17% Similarity=0.302 Sum_probs=71.5
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCC-CEEEEE---cCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCC
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI-PHFAIE---ESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGS 83 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~-~~v~~~---d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~ 83 (250)
+.+++++|+|||+||++|+++.|.++++++.++.. ..+.++ +++..++++++|+|.++||+++| +|+.+.++.|.
T Consensus 27 ~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~~G~~~~~~~G~ 106 (118)
T 1zma_A 27 DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDGQINVRCDSS 106 (118)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEETTEEEEECCTT
T ss_pred hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEECCEEEEEecCC
Confidence 45789999999999999999999999999988643 222221 12234588999999999999999 88889999999
Q ss_pred CCHHHHHHHHH
Q 025648 84 RTLDSLVAFYS 94 (250)
Q Consensus 84 ~~~~~l~~fi~ 94 (250)
++.++|.+||.
T Consensus 107 ~~~~~l~~~l~ 117 (118)
T 1zma_A 107 MSAQEIKDFAG 117 (118)
T ss_dssp CCHHHHHHHHT
T ss_pred CCHHHHHHHhh
Confidence 99999999985
No 81
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.74 E-value=6.3e-18 Score=128.21 Aligned_cols=88 Identities=19% Similarity=0.323 Sum_probs=80.0
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCC-CEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI-PHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~-~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
+.+++++|+||++||++|+.+.|.++++++.+++. ..+..+|++.+++++++|+|.++||+++| +|+.+.++.|. +.
T Consensus 31 ~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~ 109 (121)
T 2j23_A 31 GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFFKNGQKIDTVVGA-DP 109 (121)
T ss_dssp SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEEEETTEEEEEEESS-CH
T ss_pred cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEEEECCeEEeeEcCC-CH
Confidence 67889999999999999999999999999988763 55666688899999999999999999999 88889999998 99
Q ss_pred HHHHHHHHHhh
Q 025648 87 DSLVAFYSDVT 97 (250)
Q Consensus 87 ~~l~~fi~~~~ 97 (250)
++|.++|++.+
T Consensus 110 ~~l~~~l~~~l 120 (121)
T 2j23_A 110 SKLQAAITQHS 120 (121)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 99999999875
No 82
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.74 E-value=7.8e-18 Score=131.87 Aligned_cols=89 Identities=10% Similarity=0.142 Sum_probs=77.1
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeE---------E
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRV---------R 79 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~---------~ 79 (250)
.+++++|+|||+||++|+.+.|.++++++.+++...+..+|++++++++++|+|.++||+++| +|+.+. +
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~v~~~~g~~~~~~ 101 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNK 101 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEEEEEECC------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcEEEEecCCCCcce
Confidence 689999999999999999999999999999977667777799999999999999999999999 777765 3
Q ss_pred EeCCC-CHHHHHHHHHHhhC
Q 025648 80 YHGSR-TLDSLVAFYSDVTG 98 (250)
Q Consensus 80 ~~G~~-~~~~l~~fi~~~~~ 98 (250)
..|.. +.++|.++|++.+.
T Consensus 102 ~~g~~~~~~~l~~~i~~~~~ 121 (142)
T 1qgv_A 102 INWAMEDKQEMVDIIETVYR 121 (142)
T ss_dssp CCSCCSCHHHHHHHHHHHHH
T ss_pred eeeecCcHHHHHHHHHHHHH
Confidence 45555 48999999988763
No 83
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.74 E-value=5.8e-18 Score=131.05 Aligned_cols=87 Identities=17% Similarity=0.187 Sum_probs=76.1
Q ss_pred eEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcC---------CCChhHHHhhCCCccCeEEEE-eCceeEEEeC
Q 025648 13 YVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES---------AIRPSILSKYGVHGFPTLFLL-NSSMRVRYHG 82 (250)
Q Consensus 13 ~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~---------~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G 82 (250)
+++|+|||+||++|+.+.|.++++++.++ ..+..+|+ +++++++++|+|.++||+++| +|+.+.++.|
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~G 110 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFYKEGRIVDKLVG 110 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEEETTEEEEEEES
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEEcCCEEEEEEeC
Confidence 89999999999999999999999999997 44444566 677899999999999999999 8999999999
Q ss_pred CCCHHHHHHHHHHhhCCCC
Q 025648 83 SRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 83 ~~~~~~l~~fi~~~~~~~~ 101 (250)
..+.+.+.++++++++.+.
T Consensus 111 ~~~~~~~~~~i~~~~~~~~ 129 (135)
T 3emx_A 111 ATPWSLKVEKAREIYGGEG 129 (135)
T ss_dssp CCCHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHHhCCCc
Confidence 9999999999999987643
No 84
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.73 E-value=3.1e-17 Score=122.74 Aligned_cols=88 Identities=19% Similarity=0.334 Sum_probs=78.6
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 88 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~ 88 (250)
.+++++|.||++||++|+.+.|.++++++.++++ .+..+|++.+++++++|+|.++||++++ +|+.+.++.| .+.++
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g-~~~~~ 104 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGA-IFLKVDVDELKDVAEAYNVEAMPTFLFIKDGEKVDSVVG-GRKDD 104 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTS-EEEEEETTTSHHHHHHTTCCSBSEEEEEETTEEEEEEES-CCHHH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCCCc-EEEEEEcccCHHHHHHcCCCcCcEEEEEeCCeEEEEecC-CCHHH
Confidence 4789999999999999999999999999999864 4555588889999999999999999999 8888888998 58999
Q ss_pred HHHHHHHhhCC
Q 025648 89 LVAFYSDVTGM 99 (250)
Q Consensus 89 l~~fi~~~~~~ 99 (250)
|.++|.+.++.
T Consensus 105 l~~~l~~~~~~ 115 (118)
T 2vm1_A 105 IHTKIVALMGS 115 (118)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHhcc
Confidence 99999998764
No 85
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.73 E-value=1.1e-17 Score=129.33 Aligned_cols=88 Identities=14% Similarity=0.275 Sum_probs=76.4
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE---eCc--eeEEEeCC
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL---NSS--MRVRYHGS 83 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~---~g~--~~~~~~G~ 83 (250)
..+++++|+|||+||++|+.+.|.++++++.+ + ..+..+|++.+++++++|+|.++||+++| +|+ .+.++.|.
T Consensus 38 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~~~~G~ 115 (133)
T 3cxg_A 38 TQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-Y-VTLVDIDVDIHPKLNDQHNIKALPTFEFYFNLNNEWVLVHTVEGA 115 (133)
T ss_dssp -CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-E-CEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESC
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-C-EEEEEEeccchHHHHHhcCCCCCCEEEEEEecCCCeEEEEEEcCC
Confidence 34689999999999999999999999999888 3 44555588899999999999999999998 677 77888898
Q ss_pred CCHHHHHHHHHHhhCC
Q 025648 84 RTLDSLVAFYSDVTGM 99 (250)
Q Consensus 84 ~~~~~l~~fi~~~~~~ 99 (250)
+.++|.++|.+.++.
T Consensus 116 -~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 116 -NQNDIEKAFQKYCLE 130 (133)
T ss_dssp -CHHHHHHHHHHHSEE
T ss_pred -CHHHHHHHHHHHHHh
Confidence 899999999998753
No 86
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.73 E-value=2.2e-17 Score=124.81 Aligned_cols=90 Identities=17% Similarity=0.316 Sum_probs=77.1
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-e----CceeEEEeCC
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-N----SSMRVRYHGS 83 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~----g~~~~~~~G~ 83 (250)
+.+++++|+||++||++|+.+.|.++++++.+++ ..+..+|++.+++++++|+|.++||+++| + |+.+.++.|.
T Consensus 21 ~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~G~ 99 (118)
T 2f51_A 21 EAPGLVLVDFFATWCGPCQRLGQILPSIAEANKD-VTFIKVDVDKNGNAADAYGVSSIPALFFVKKEGNEIKTLDQFVGA 99 (118)
T ss_dssp HCSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESC
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-eEEEEEECCCCHHHHHhcCCCCCCEEEEEeCCCCcceEEEeecCC
Confidence 4588999999999999999999999999999944 55666688899999999999999999999 7 8888899997
Q ss_pred CCHHHHHHHHHHhhCCC
Q 025648 84 RTLDSLVAFYSDVTGMN 100 (250)
Q Consensus 84 ~~~~~l~~fi~~~~~~~ 100 (250)
.+ ++|.+.+.++....
T Consensus 100 ~~-~~l~~~~~~~~~~~ 115 (118)
T 2f51_A 100 DV-SRIKADIEKFKHHH 115 (118)
T ss_dssp CH-HHHHHHHHHHC---
T ss_pred CH-HHHHHHHHHhhhcc
Confidence 75 56999999887543
No 87
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.72 E-value=3.5e-17 Score=121.51 Aligned_cols=86 Identities=22% Similarity=0.430 Sum_probs=77.3
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 88 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~ 88 (250)
.+++++|+||++||++|+.+.|.++++++.+++ ..+..+|++.+++++++|+|.++||++++ +|+.+.++.| .+.++
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g-~~~~~ 102 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFPN-VTFLKVDVDELKAVAEEWNVEAMPTFIFLKDGKLVDKTVG-ADKDG 102 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSS-EEEEEEETTTCHHHHHHHHCSSTTEEEEEETTEEEEEEEC-CCTTH
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCCC-cEEEEEEccccHHHHHhCCCCcccEEEEEeCCEEEEEEec-CCHHH
Confidence 588999999999999999999999999999985 44555588889999999999999999999 8888888998 68899
Q ss_pred HHHHHHHhh
Q 025648 89 LVAFYSDVT 97 (250)
Q Consensus 89 l~~fi~~~~ 97 (250)
|.++|++++
T Consensus 103 l~~~l~~~~ 111 (113)
T 1ti3_A 103 LPTLVAKHA 111 (113)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999999875
No 88
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.72 E-value=7.4e-18 Score=132.30 Aligned_cols=94 Identities=13% Similarity=0.173 Sum_probs=71.9
Q ss_pred CCCeEEEEEEcCC--ChhHHhhhHHHHHHHHHcCCCCE--EEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCC
Q 025648 10 SHEYVAVLFYASW--CPFSRNFRPSFSVLSSLYSSIPH--FAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSR 84 (250)
Q Consensus 10 ~~~~vlV~Fya~w--C~~C~~~~p~~e~la~~~~~~~~--v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~ 84 (250)
.++.++|+|+++| |++|+.+.|.|++++++| +... +..+|++++++++++|+|+++||+++| +|+.+.++.|.+
T Consensus 33 ~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~~~fk~G~~v~~~~G~~ 111 (142)
T 2es7_A 33 RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNVRRFPATLVFTDGKLRGALSGIH 111 (142)
T ss_dssp -CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTCCSSSEEEEESCC----CEESCC
T ss_pred hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCCCcCCeEEEEeCCEEEEEEeCCC
Confidence 4456889999987 999999999999999999 5455 667788889999999999999999999 999999999999
Q ss_pred CHHHHHHHHHHhhCCCCCCC
Q 025648 85 TLDSLVAFYSDVTGMNTASL 104 (250)
Q Consensus 85 ~~~~l~~fi~~~~~~~~~~l 104 (250)
+.++|.++|++.++.....+
T Consensus 112 ~~~~l~~~i~~~l~~~~~~~ 131 (142)
T 2es7_A 112 PWAELLTLMRSIVDTPAAQE 131 (142)
T ss_dssp CHHHHHHHHHHHHC------
T ss_pred CHHHHHHHHHHHhcccccCC
Confidence 99999999999998765544
No 89
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=1.6e-18 Score=134.17 Aligned_cols=88 Identities=20% Similarity=0.306 Sum_probs=77.1
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC-CCEEEEEcCCCChhHHHhhCCC------ccCeEEEE-eCceeEEE
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS-IPHFAIEESAIRPSILSKYGVH------GFPTLFLL-NSSMRVRY 80 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~-~~~v~~~d~~~~~~l~~~~~I~------~~PTi~l~-~g~~~~~~ 80 (250)
..+++++|+|||+||++|+.+.|.|+++++.+++ ...+..+|++++++++++|+|. ++||+++| +|+.+.++
T Consensus 24 ~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~~~Pt~~~~~~G~~~~~~ 103 (137)
T 2dj0_A 24 DKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLPTLILFQGGKEAMRR 103 (137)
T ss_dssp STTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSSCSSEEEEESSSSEEEEE
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcCCCCEEEEEECCEEEEEe
Confidence 3455999999999999999999999999999985 5677777999999999999999 99999999 89999999
Q ss_pred eCCCCHHHHHHHHHHh
Q 025648 81 HGSRTLDSLVAFYSDV 96 (250)
Q Consensus 81 ~G~~~~~~l~~fi~~~ 96 (250)
.|..+.++|.+|+.+.
T Consensus 104 ~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 104 PQIDKKGRAVSWTFSE 119 (137)
T ss_dssp SCBCSSSCBCCCCCCH
T ss_pred cCcCchHHHHHHHhcc
Confidence 9988877776666543
No 90
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.71 E-value=2.9e-17 Score=137.97 Aligned_cols=92 Identities=22% Similarity=0.492 Sum_probs=80.9
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCC---CEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCC
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI---PHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSR 84 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~---~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~ 84 (250)
+.+++++|+|||+||++|+.+.|.|+++++.+.+. ..+..+|++.+++++++|+|+++||+++| +|+. ..|.|.+
T Consensus 145 ~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~-~~~~g~~ 223 (241)
T 3idv_A 145 NDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRP-YDYNGPR 223 (241)
T ss_dssp HHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE-EECCSCC
T ss_pred ccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCeE-EEecCCC
Confidence 45679999999999999999999999999998652 56667789999999999999999999999 6655 4599999
Q ss_pred CHHHHHHHHHHhhCCCC
Q 025648 85 TLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 85 ~~~~l~~fi~~~~~~~~ 101 (250)
+.++|.+||.+.+++.+
T Consensus 224 ~~~~l~~~l~~~~~~~~ 240 (241)
T 3idv_A 224 EKYGIVDYMIEQSGAAA 240 (241)
T ss_dssp SHHHHHHHHHHHTTCTT
T ss_pred CHHHHHHHHHhhhCCCC
Confidence 99999999999988653
No 91
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.71 E-value=5.6e-17 Score=123.36 Aligned_cols=82 Identities=18% Similarity=0.308 Sum_probs=70.3
Q ss_pred CCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCC-----
Q 025648 11 HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSR----- 84 (250)
Q Consensus 11 ~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~----- 84 (250)
+++++|+|||+||++|+.+.|.+++++++|+++.++ .+|.++. +++|+|+++||+++| +|+.+.++.|..
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~v~f~-kvd~d~~---~~~~~v~~~PT~~~fk~G~~v~~~~G~~~~gg~ 98 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFPETKFV-KAIVNSC---IQHYHDNCLPTIFVYKNGQIEAKFIGIIECGGI 98 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCTTSEEE-EEEGGGT---STTCCGGGCSEEEEEETTEEEEEEESTTTTTCS
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCCCCEEE-EEEhHHh---HHHCCCCCCCEEEEEECCEEEEEEeChhhhCCC
Confidence 449999999999999999999999999999875544 4465543 589999999999999 999999999854
Q ss_pred --CHHHHHHHHHHh
Q 025648 85 --TLDSLVAFYSDV 96 (250)
Q Consensus 85 --~~~~l~~fi~~~ 96 (250)
+.++|..+|.+.
T Consensus 99 ~~~~~~le~~L~~~ 112 (118)
T 3evi_A 99 NLKLEELEWKLAEV 112 (118)
T ss_dssp SCCHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHc
Confidence 689999988764
No 92
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.71 E-value=1.6e-17 Score=117.22 Aligned_cols=83 Identities=17% Similarity=0.292 Sum_probs=74.8
Q ss_pred CeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHH
Q 025648 12 EYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVA 91 (250)
Q Consensus 12 ~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~ 91 (250)
.+++|.||++||++|+++.|.++++++.+++...+..+|++++++++++|||.++||+++ +|+. ++.|..+.++|.+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~-~G~~--~~~G~~~~~~l~~ 79 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI-NGDV--EFIGAPTKEALVE 79 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE-TTEE--ECCSSSSSHHHHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE-CCEE--eeecCCCHHHHHH
Confidence 478999999999999999999999999998666777778888999999999999999999 7766 8899999999999
Q ss_pred HHHHhh
Q 025648 92 FYSDVT 97 (250)
Q Consensus 92 fi~~~~ 97 (250)
+|++.+
T Consensus 80 ~l~~~l 85 (85)
T 1fo5_A 80 AIKKRL 85 (85)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 998753
No 93
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.71 E-value=2.1e-17 Score=116.61 Aligned_cols=82 Identities=13% Similarity=0.233 Sum_probs=74.1
Q ss_pred eEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHH
Q 025648 13 YVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAF 92 (250)
Q Consensus 13 ~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~f 92 (250)
..+|.||++||++|+++.|.++++++.+++...+..+|.+++++++++|||+++||+++ +|+. ++.|..+.++|.++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~-~G~~--~~~G~~~~~~l~~~ 79 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI-NGVV--RFVGAPSREELFEA 79 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE-TTTE--EEECSSCCHHHHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE-CCEE--EEccCCCHHHHHHH
Confidence 46899999999999999999999999998656666778889999999999999999999 8776 89999999999999
Q ss_pred HHHhh
Q 025648 93 YSDVT 97 (250)
Q Consensus 93 i~~~~ 97 (250)
|++.+
T Consensus 80 l~~~l 84 (85)
T 1nho_A 80 INDEM 84 (85)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 98865
No 94
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.70 E-value=6.3e-17 Score=135.02 Aligned_cols=88 Identities=15% Similarity=0.186 Sum_probs=79.0
Q ss_pred CCCeE-EEEEEcCCChhHHhhhHHHHHHHHHcC----CCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCC
Q 025648 10 SHEYV-AVLFYASWCPFSRNFRPSFSVLSSLYS----SIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGS 83 (250)
Q Consensus 10 ~~~~v-lV~Fya~wC~~C~~~~p~~e~la~~~~----~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~ 83 (250)
.++++ +|.|||+||++|+++.|.++++++.++ +...+..+|++.+++++++|+|.++||+++| +|+...++.|.
T Consensus 132 ~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~ 211 (226)
T 1a8l_A 132 IDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNGEDRVEFEGA 211 (226)
T ss_dssp CCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETTEEEEEEESC
T ss_pred cCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCCceeEEEcCC
Confidence 34555 999999999999999999999999987 4566677788899999999999999999999 88889999999
Q ss_pred CCHHHHHHHHHHhh
Q 025648 84 RTLDSLVAFYSDVT 97 (250)
Q Consensus 84 ~~~~~l~~fi~~~~ 97 (250)
++.++|.++|.+.+
T Consensus 212 ~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 212 YPEKMFLEKLLSAL 225 (226)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhh
Confidence 99999999999875
No 95
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.70 E-value=3.2e-17 Score=125.88 Aligned_cols=89 Identities=18% Similarity=0.374 Sum_probs=78.0
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHH--HHHHHcCCCCEEEEEcC---CCChhHHHhhCC---CccCeEEEE--eCceeE
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFS--VLSSLYSSIPHFAIEES---AIRPSILSKYGV---HGFPTLFLL--NSSMRV 78 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e--~la~~~~~~~~v~~~d~---~~~~~l~~~~~I---~~~PTi~l~--~g~~~~ 78 (250)
..+++++|+||++||++|+.+.|.|+ ++++.+++...+..+|+ +.+++++++|+| .++||+++| +|+.+.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~ 106 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRY 106 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEE
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEE
Confidence 56899999999999999999999999 99998855444555577 789999999999 999999999 788888
Q ss_pred EEeC-------CCCHHHHHHHHHHhh
Q 025648 79 RYHG-------SRTLDSLVAFYSDVT 97 (250)
Q Consensus 79 ~~~G-------~~~~~~l~~fi~~~~ 97 (250)
++.| ..+.+++.+|+++..
T Consensus 107 ~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 107 TTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp ECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred EecCCcccccccCCHHHHHHHHHHhc
Confidence 9888 679999999998764
No 96
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=5.3e-17 Score=123.92 Aligned_cols=92 Identities=16% Similarity=0.281 Sum_probs=78.5
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHH---HHHHHHcCCCCEEEEEcCC--CChhHHHhhCCCccCeEEEE--eCceeEEEe
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSF---SVLSSLYSSIPHFAIEESA--IRPSILSKYGVHGFPTLFLL--NSSMRVRYH 81 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~---e~la~~~~~~~~v~~~d~~--~~~~l~~~~~I~~~PTi~l~--~g~~~~~~~ 81 (250)
..+++++|+||++||++|+.+.|.+ +++++.+.....+..+|++ ....++++|+|.++||+++| +|+.+.++.
T Consensus 25 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~ 104 (130)
T 2kuc_A 25 VEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLV 104 (130)
T ss_dssp HHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEEEEEE
T ss_pred hcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEEEEec
Confidence 3578999999999999999999999 7777766543444445666 46789999999999999999 788888999
Q ss_pred CCCCHHHHHHHHHHhhCCC
Q 025648 82 GSRTLDSLVAFYSDVTGMN 100 (250)
Q Consensus 82 G~~~~~~l~~fi~~~~~~~ 100 (250)
|..+.++|.++|++.+++.
T Consensus 105 G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 105 GAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp SCCCHHHHHHHHHHHHSCC
T ss_pred CCCCHHHHHHHHHHHHHhc
Confidence 9999999999999998764
No 97
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.69 E-value=1.8e-16 Score=122.79 Aligned_cols=85 Identities=21% Similarity=0.307 Sum_probs=73.0
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCC----
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSR---- 84 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~---- 84 (250)
.+++++|+|||+||++|+.+.|.|+++++.++++. +..+|++... ++|+|.++||+++| +|+.+.++.|..
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~v~-~~~vd~~~~~---~~~~i~~~Pt~~~~~~G~~v~~~~G~~~~~~ 104 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPETK-FVKAIVNSCI---EHYHDNCLPTIFVYKNGQIEGKFIGIIECGG 104 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSSEE-EEEECCSSSC---SSCCSSCCSEEEEESSSSCSEEEESTTTTTC
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCcE-EEEEEhhcCc---ccCCCCCCCEEEEEECCEEEEEEEeEEeeCC
Confidence 35799999999999999999999999999997644 4445666553 78999999999999 999999999975
Q ss_pred ---CHHHHHHHHHHhhC
Q 025648 85 ---TLDSLVAFYSDVTG 98 (250)
Q Consensus 85 ---~~~~l~~fi~~~~~ 98 (250)
+.++|.++|.+...
T Consensus 105 ~~~~~~~l~~~l~~~~~ 121 (135)
T 2dbc_A 105 INLKLEELEWKLSEVGA 121 (135)
T ss_dssp TTCCHHHHHHHHHHHTS
T ss_pred CcCCHHHHHHHHHHcCC
Confidence 78999999998754
No 98
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.69 E-value=5.1e-17 Score=125.45 Aligned_cols=89 Identities=18% Similarity=0.315 Sum_probs=75.1
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHH---HHHHHHcCCCCEEEEEcC----CCChhHHHhhCCCccCeEEEE--eCcee--E
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSF---SVLSSLYSSIPHFAIEES----AIRPSILSKYGVHGFPTLFLL--NSSMR--V 78 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~---e~la~~~~~~~~v~~~d~----~~~~~l~~~~~I~~~PTi~l~--~g~~~--~ 78 (250)
.+++++|+||++||++|+++.|.+ +++++.++++..+.+ |+ +...+++++|+|.++||+++| +|+.+ .
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~v-d~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~ 108 (134)
T 2fwh_A 30 KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQA-NVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQA 108 (134)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEE-ECTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBCGGG
T ss_pred cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEE-eCCCCcchHHHHHHHcCCCCCCEEEEECCCCCEeeee
Confidence 478999999999999999999999 999999988544444 56 456789999999999999999 66666 6
Q ss_pred EEeCCCCHHHHHHHHHHhhCC
Q 025648 79 RYHGSRTLDSLVAFYSDVTGM 99 (250)
Q Consensus 79 ~~~G~~~~~~l~~fi~~~~~~ 99 (250)
++.|..+.++|.++|++..+.
T Consensus 109 ~~~G~~~~~~l~~~l~~~~~~ 129 (134)
T 2fwh_A 109 RVTGFMDAETFSAHLRDRQPH 129 (134)
T ss_dssp CBCSCCCHHHHHHHHHHC---
T ss_pred eeeeccCHHHHHHHHHhcCcc
Confidence 899999999999999987653
No 99
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.51 E-value=2.1e-18 Score=126.12 Aligned_cols=89 Identities=25% Similarity=0.403 Sum_probs=80.2
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~ 86 (250)
.+.+++++|.||++||++|+.+.|.++++++.+++...+..+|++.+++++++|+|.++||+++| +|+.+.++.|..+.
T Consensus 16 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~ 95 (106)
T 2yj7_A 16 LKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKNGQVVDRLVGAQPK 95 (106)
Confidence 46788999999999999999999999999999986555666688888999999999999999999 88889999999999
Q ss_pred HHHHHHHHHh
Q 025648 87 DSLVAFYSDV 96 (250)
Q Consensus 87 ~~l~~fi~~~ 96 (250)
++|.++|++.
T Consensus 96 ~~l~~~l~~~ 105 (106)
T 2yj7_A 96 EALKERIDKH 105 (106)
Confidence 9999998865
No 100
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.67 E-value=3.5e-17 Score=122.09 Aligned_cols=79 Identities=18% Similarity=0.375 Sum_probs=64.6
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEE-cC--CCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIE-ES--AIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTL 86 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~-d~--~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~ 86 (250)
.+++++|+|||+||++|+++.|.|+++++.++ .+.++ +. +++++++++|+|+++||+++ +|+ .|.|.++.
T Consensus 11 ~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~---~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i-~G~---~~~G~~~~ 83 (106)
T 3kp8_A 11 LRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP---YVECSPNGPGTPQAQECTEAGITSYPTWII-NGR---TYTGVRSL 83 (106)
T ss_dssp HHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC---EEESCTTCTTSCCCHHHHHTTCCSSSEEEE-TTE---EEESCCCH
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC---EEEEecccccchhHHHHHHcCCeEeCEEEE-CCE---EecCCCCH
Confidence 45678999999999999999999999998875 33222 11 16789999999999999877 775 38999999
Q ss_pred HHHHHHHHH
Q 025648 87 DSLVAFYSD 95 (250)
Q Consensus 87 ~~l~~fi~~ 95 (250)
++|.+++.-
T Consensus 84 ~~l~~~~~~ 92 (106)
T 3kp8_A 84 EALAVASGY 92 (106)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhCC
Confidence 999998754
No 101
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.65 E-value=3.1e-17 Score=124.98 Aligned_cols=89 Identities=21% Similarity=0.357 Sum_probs=79.1
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDS 88 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~ 88 (250)
.+++++|+||++||++|+.+.|.++++++.++++. +..+|++.+++++++|+|.++||++++ +|+.+.++.| .+.++
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~-~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g-~~~~~ 112 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAV-FLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVG-ARKDD 112 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCTTBC-CEECCTTTSGGGHHHHTCCSSCCCCBCTTTTCCBCCCT-TCTTT
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCCE-EEEEeccchHHHHHHcCCCccceEEEEeCCeEEEEEeC-CCHHH
Confidence 57899999999999999999999999999998654 445588889999999999999999999 8888888888 58899
Q ss_pred HHHHHHHhhCCC
Q 025648 89 LVAFYSDVTGMN 100 (250)
Q Consensus 89 l~~fi~~~~~~~ 100 (250)
|.++|.+.++..
T Consensus 113 l~~~l~~~~~~~ 124 (130)
T 1wmj_A 113 LQNTIVKHVGAT 124 (130)
T ss_dssp HHHHHHHHTSSS
T ss_pred HHHHHHHHHhcc
Confidence 999999988654
No 102
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.65 E-value=2.8e-16 Score=140.32 Aligned_cols=90 Identities=29% Similarity=0.486 Sum_probs=78.6
Q ss_pred cccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCC--CEEEEEcCCCChhHHHhhCCCccCeEEEE-eC--ceeEEEe
Q 025648 7 HKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI--PHFAIEESAIRPSILSKYGVHGFPTLFLL-NS--SMRVRYH 81 (250)
Q Consensus 7 ~~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~--~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g--~~~~~~~ 81 (250)
..+.+++++|+||||||++|+++.|.|+++++.+++. ..++.+|++.+. +.+|+|+++||+++| .| +.+.+|.
T Consensus 263 ~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v~~~Pt~~~~~~~~~~~~~~~~ 340 (361)
T 3uem_A 263 AFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKVHSFPTLKFFPASADRTVIDYN 340 (361)
T ss_dssp HTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCCCCSSSEEEEECSSSSCCCEECC
T ss_pred cccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcCCcccCeEEEEECCCCcceeEec
Confidence 3467899999999999999999999999999999874 566667877665 789999999999999 44 5789999
Q ss_pred CCCCHHHHHHHHHHhhC
Q 025648 82 GSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 82 G~~~~~~l~~fi~~~~~ 98 (250)
|.++.++|.+||.+...
T Consensus 341 G~~~~~~l~~~l~~~~~ 357 (361)
T 3uem_A 341 GERTLDGFKKFLESGGQ 357 (361)
T ss_dssp SCSSHHHHHHHHTTTSC
T ss_pred CCCCHHHHHHHHHhcCC
Confidence 99999999999998754
No 103
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.65 E-value=3.2e-16 Score=118.55 Aligned_cols=86 Identities=15% Similarity=0.180 Sum_probs=67.6
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCC-----CEEEEEcCCCC--hhHHHhhCCCccCeEEEE-eCceeEEEe
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI-----PHFAIEESAIR--PSILSKYGVHGFPTLFLL-NSSMRVRYH 81 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~-----~~v~~~d~~~~--~~l~~~~~I~~~PTi~l~-~g~~~~~~~ 81 (250)
+.+.+||+|||+||++|+.+.+.+. ..++.. ..+..+|.+.+ ++++.+|+|.++||+++| +|+++.+..
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~---~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~ 93 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIA---PQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLE 93 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTT---TTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHH---hhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeec
Confidence 4568999999999999999986443 333321 33444455443 589999999999999999 999999999
Q ss_pred CCCCHHHHHHHHHHhhC
Q 025648 82 GSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 82 G~~~~~~l~~fi~~~~~ 98 (250)
|....+.|.++|++.++
T Consensus 94 G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 94 GYPGEDFFWPMLARLIG 110 (116)
T ss_dssp CCCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHh
Confidence 99999999999998764
No 104
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.64 E-value=4.1e-16 Score=144.41 Aligned_cols=95 Identities=24% Similarity=0.512 Sum_probs=82.5
Q ss_pred ccccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCce--eEEE
Q 025648 6 VHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSM--RVRY 80 (250)
Q Consensus 6 ~~~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~--~~~~ 80 (250)
+..+.+++++|+|||+||++|+++.|.|+++++.+++ ...+..+|++.+ +++.+|+|.++||+++| +|+. +.+|
T Consensus 365 ~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~-~~~~~~~v~~~Pt~~~~~~~~~~~~~~~ 443 (481)
T 3f8u_A 365 IVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEVRGFPTIYFSPANKKLNPKKY 443 (481)
T ss_dssp HHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS-CCCTTCCCCSSSEEEEECTTCTTSCEEC
T ss_pred HhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch-hhHhhCCCcccCEEEEEeCCCeEeeeEe
Confidence 3455689999999999999999999999999999987 355666677766 88999999999999999 5554 7899
Q ss_pred eCCCCHHHHHHHHHHhhCCCC
Q 025648 81 HGSRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 81 ~G~~~~~~l~~fi~~~~~~~~ 101 (250)
.|.++.++|.+||.+..+...
T Consensus 444 ~G~~~~~~l~~~l~~~~~~~~ 464 (481)
T 3f8u_A 444 EGGRELSDFISYLQREATNPP 464 (481)
T ss_dssp CSCCSHHHHHHHHHHHCSSCC
T ss_pred CCCCCHHHHHHHHHHhcCCcc
Confidence 999999999999999987554
No 105
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.63 E-value=1.2e-15 Score=120.77 Aligned_cols=89 Identities=16% Similarity=0.382 Sum_probs=74.2
Q ss_pred cCCCeEEEEEE-cCCChhHHhhhHHH---HHHHHHcC-CCCEEEEEcCCCC-----------hhHHHhhCCCccCeEEEE
Q 025648 9 NSHEYVAVLFY-ASWCPFSRNFRPSF---SVLSSLYS-SIPHFAIEESAIR-----------PSILSKYGVHGFPTLFLL 72 (250)
Q Consensus 9 ~~~~~vlV~Fy-a~wC~~C~~~~p~~---e~la~~~~-~~~~v~~~d~~~~-----------~~l~~~~~I~~~PTi~l~ 72 (250)
..+++++|+|| |+||++|+++.|.+ +++.+.+. ++..+.+ |++.. .+++++|+|.++||++++
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~v-d~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~ 123 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEV-DFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFI 123 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEE-ECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEE
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEe-cCccccCCChhhHhhHHHHHHHcCCCCCCEEEEE
Confidence 45789999999 99999999999999 78877663 4555554 55443 489999999999999999
Q ss_pred --eCceeEEEeCCC--CHHHHHHHHHHhhCC
Q 025648 73 --NSSMRVRYHGSR--TLDSLVAFYSDVTGM 99 (250)
Q Consensus 73 --~g~~~~~~~G~~--~~~~l~~fi~~~~~~ 99 (250)
+|+.+.++ |.. +.+++.++|++.++.
T Consensus 124 d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 124 DAEGKQLARM-GFEPGGGAAYVSKVKSALKL 153 (154)
T ss_dssp CTTCCEEEEE-CCCTTCHHHHHHHHHHHHTC
T ss_pred cCCCCEEEEe-cCCCCCHHHHHHHHHHHHhc
Confidence 78888888 988 999999999998753
No 106
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.63 E-value=1.5e-15 Score=129.14 Aligned_cols=88 Identities=14% Similarity=0.180 Sum_probs=77.0
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcC----CCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCCCC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS----SIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRT 85 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~----~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~ 85 (250)
.++++++.||||||++|+++.|.|++++..++ ..+.+..+|++.+++++++|+|.++||+++ +|+. .|.|.++
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i-~G~~--~~~G~~~ 213 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI-NGYL--VFVGVPY 213 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE-TTEE--EEESCCC
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE-CCEE--EEeCCCC
Confidence 45678999999999999999999999999982 335566778999999999999999999988 7764 3999999
Q ss_pred HHHHHHHHHHhhCCC
Q 025648 86 LDSLVAFYSDVTGMN 100 (250)
Q Consensus 86 ~~~l~~fi~~~~~~~ 100 (250)
.++|.++|.+.++..
T Consensus 214 ~~~l~~~l~~~~~~~ 228 (243)
T 2hls_A 214 EEDFLDYVKSAAEGR 228 (243)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhcc
Confidence 999999999998764
No 107
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.42 E-value=3e-17 Score=125.44 Aligned_cols=93 Identities=20% Similarity=0.270 Sum_probs=77.8
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHH---HHHHHHcCCCCEEEEEcC--CCChhHHHhhCCCccCeEEEE---eCce--e
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSF---SVLSSLYSSIPHFAIEES--AIRPSILSKYGVHGFPTLFLL---NSSM--R 77 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~---e~la~~~~~~~~v~~~d~--~~~~~l~~~~~I~~~PTi~l~---~g~~--~ 77 (250)
...+++++|+|||+||++|+.+.|.+ +++++.+++...+..+|+ ++...++++|+|.++||+++| +|+. +
T Consensus 16 ~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~ 95 (130)
T 2lst_A 16 QAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEV 95 (130)
Confidence 45678999999999999999999999 999988876333334455 456889999999999999999 3666 7
Q ss_pred EEEeCCCCHHHHHHHHHHhhCCC
Q 025648 78 VRYHGSRTLDSLVAFYSDVTGMN 100 (250)
Q Consensus 78 ~~~~G~~~~~~l~~fi~~~~~~~ 100 (250)
.++.|..+.++|.++|++.++..
T Consensus 96 ~~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 96 GRLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 88999999999999999887644
No 108
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.61 E-value=4.2e-16 Score=130.62 Aligned_cols=86 Identities=12% Similarity=0.211 Sum_probs=74.5
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCH--
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTL-- 86 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~-- 86 (250)
.+++|+|+||++||++|+.+.|.|+++++.|+++.++.+ |++ ++.++.+|+|.++||+++| +|+.+.++.|..+.
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~~v~f~~v-d~~-~~~l~~~~~i~~~PTl~~~~~G~~v~~~~G~~~~~g 196 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKI-RAS-NTGAGDRFSSDVLPTLLVYKGGELISNFISVAEQFA 196 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTTSEEEEE-EHH-HHTCSTTSCGGGCSEEEEEETTEEEEEETTGGGGSC
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEE-ECC-cHHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccCc
Confidence 358999999999999999999999999999986554444 665 7789999999999999999 88899999997764
Q ss_pred -----HHHHHHHHHhh
Q 025648 87 -----DSLVAFYSDVT 97 (250)
Q Consensus 87 -----~~l~~fi~~~~ 97 (250)
++|..+|.++.
T Consensus 197 ~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 197 EDFFAADVESFLNEYG 212 (217)
T ss_dssp SSCCHHHHHHHHHTTT
T ss_pred ccCCHHHHHHHHHHcC
Confidence 99999998753
No 109
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.61 E-value=5.9e-16 Score=124.09 Aligned_cols=88 Identities=13% Similarity=0.173 Sum_probs=69.4
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHH---HHHHHHcCC-CCEEEEEcCCCChhH--------------------------H
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSF---SVLSSLYSS-IPHFAIEESAIRPSI--------------------------L 58 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~---e~la~~~~~-~~~v~~~d~~~~~~l--------------------------~ 58 (250)
..+++++|+|||+||++|+.+.+.+ .++.+.+.+ +..+.+ +.+...++ +
T Consensus 45 ~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (172)
T 3f9u_A 45 QHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITL-YVDNKTPLTEPVKIMENGTERTLRTVGDKWSYLQR 123 (172)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEE-ETTCCCEEEEEEEEEETTEEEEEEEHHHHHHHHHH
T ss_pred HcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEE-ecCcccccchhhhhhhcchhhhhhhhhhhhhHHHH
Confidence 5689999999999999999984444 555555543 444444 55555544 7
Q ss_pred HhhCCCccCeEEEE--eCceeEEEeCCCC-HHHHHHHHHHhh
Q 025648 59 SKYGVHGFPTLFLL--NSSMRVRYHGSRT-LDSLVAFYSDVT 97 (250)
Q Consensus 59 ~~~~I~~~PTi~l~--~g~~~~~~~G~~~-~~~l~~fi~~~~ 97 (250)
.+|+|.++||++++ +|+.+.++.|..+ .+++.++|++.+
T Consensus 124 ~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 124 VKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp HHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred HHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 89999999999999 7888889999998 999999998875
No 110
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.61 E-value=1.2e-15 Score=130.03 Aligned_cols=87 Identities=11% Similarity=0.162 Sum_probs=74.0
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCC-----
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGS----- 83 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~----- 83 (250)
.+++|+|+|||+||++|+.+.|.|+++++.|+++.++.+ +++. +.++.+|+|.++||+++| +|+.+.++.|.
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~v~f~kV-d~d~-~~l~~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g 209 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYPMVKFCKI-KASN-TGAGDRFSSDVLPTLLVYKGGELLSNFISVTEQLA 209 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTTSEEEEE-EHHH-HCCTTSSCTTTCSEEEEEETTEEEEEETTGGGGSC
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCCEEEEE-eCCc-HHHHHHCCCCCCCEEEEEECCEEEEEEeCCccccc
Confidence 578999999999999999999999999999988555444 5544 778999999999999999 88888888874
Q ss_pred --CCHHHHHHHHHHhhC
Q 025648 84 --RTLDSLVAFYSDVTG 98 (250)
Q Consensus 84 --~~~~~l~~fi~~~~~ 98 (250)
.+.++|..+|.++..
T Consensus 210 ~~~~~e~Le~~L~~~g~ 226 (245)
T 1a0r_P 210 EEFFTGDVESFLNEYGL 226 (245)
T ss_dssp TTCCHHHHHHHHHTTTC
T ss_pred ccccHHHHHHHHHHcCC
Confidence 357889999988743
No 111
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.61 E-value=6.6e-15 Score=113.69 Aligned_cols=90 Identities=11% Similarity=0.219 Sum_probs=77.5
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC-CCEEEEEc--------------------------CCCChhHHHhhC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS-IPHFAIEE--------------------------SAIRPSILSKYG 62 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~-~~~v~~~d--------------------------~~~~~~l~~~~~ 62 (250)
.+++++|.||++||++|+.+.|.++++++.+++ +.++.+.- .+....++++|+
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 107 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFE 107 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTC
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhC
Confidence 578999999999999999999999999999987 44444431 345678999999
Q ss_pred CCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCC
Q 025648 63 VHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTGM 99 (250)
Q Consensus 63 I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~ 99 (250)
|.++||++++ +|+.+.++.|..+.++|.++|++.+..
T Consensus 108 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 108 NEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp CCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHTT
T ss_pred CCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHhc
Confidence 9999999999 788888999999999999999998753
No 112
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.60 E-value=2.9e-15 Score=125.38 Aligned_cols=85 Identities=9% Similarity=0.177 Sum_probs=74.9
Q ss_pred CCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHH
Q 025648 11 HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLV 90 (250)
Q Consensus 11 ~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~ 90 (250)
+..++|+||++||++|+.+.|.++++++.+++ ..+..+|++.+++++++|+|.++||+++ +|+ +.++.|.++.++|.
T Consensus 136 ~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~-~G~-~~~~~G~~~~~~l~ 212 (229)
T 2ywm_A 136 IPIEIWVFVTTSCGYCPSAAVMAWDFALANDY-ITSKVIDASENQDLAEQFQVVGVPKIVI-NKG-VAEFVGAQPENAFL 212 (229)
T ss_dssp SCEEEEEEECTTCTTHHHHHHHHHHHHHHCTT-EEEEEEEGGGCHHHHHHTTCCSSSEEEE-GGG-TEEEESCCCHHHHH
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHCCC-eEEEEEECCCCHHHHHHcCCcccCEEEE-CCE-EEEeeCCCCHHHHH
Confidence 34448899999999999999999999999954 5566668889999999999999999998 887 77899999999999
Q ss_pred HHHHHhhC
Q 025648 91 AFYSDVTG 98 (250)
Q Consensus 91 ~fi~~~~~ 98 (250)
++|.+.++
T Consensus 213 ~~l~~~~~ 220 (229)
T 2ywm_A 213 GYIMAVYE 220 (229)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99998764
No 113
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.60 E-value=1.3e-15 Score=115.85 Aligned_cols=85 Identities=16% Similarity=0.174 Sum_probs=70.7
Q ss_pred CCCeEEEEEEcC-------CChhHHhhhHHHHHHHHHcCCCCEEEEEcC-------CCChhHHHhhCCCccCeEEEE-eC
Q 025648 10 SHEYVAVLFYAS-------WCPFSRNFRPSFSVLSSLYSSIPHFAIEES-------AIRPSILSKYGVHGFPTLFLL-NS 74 (250)
Q Consensus 10 ~~~~vlV~Fya~-------wC~~C~~~~p~~e~la~~~~~~~~v~~~d~-------~~~~~l~~~~~I~~~PTi~l~-~g 74 (250)
.+++++|+|||+ ||++|+.+.|.++++++.+++...+..+|+ +.++.++++|+|.++||+++| ++
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~~~~~ 102 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGTP 102 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEETTSS
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEEEcCC
Confidence 589999999999 999999999999999999976555666677 788899999999999999999 54
Q ss_pred ceeEEEeCCCCHHHHHHHHHH
Q 025648 75 SMRVRYHGSRTLDSLVAFYSD 95 (250)
Q Consensus 75 ~~~~~~~G~~~~~~l~~fi~~ 95 (250)
+.+..+.| .+.+.|.+||.+
T Consensus 103 ~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 103 QKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp CEEEGGGG-GCHHHHHHHHHC
T ss_pred ceEecccc-CCHHHHHHHHhc
Confidence 44433333 578889998875
No 114
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.60 E-value=2.8e-15 Score=103.94 Aligned_cols=74 Identities=9% Similarity=0.204 Sum_probs=62.3
Q ss_pred EEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCCC-CHHHHHHH
Q 025648 14 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSR-TLDSLVAF 92 (250)
Q Consensus 14 vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~-~~~~l~~f 92 (250)
..|.||++||++|+.+.|.++++++.+++...+..+| +++++++|||.++||+++ +|+.+.+ |.. +.++|.++
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~~~-~G~~~~~--G~~~~~~~l~~~ 75 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGLAV-DGELKIM--GRVASKEEIKKI 75 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCEEE-TTEEEEC--SSCCCHHHHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEEEE-CCEEEEc--CCCCCHHHHHHH
Confidence 3589999999999999999999999998544444444 789999999999999999 7776555 887 99999887
Q ss_pred H
Q 025648 93 Y 93 (250)
Q Consensus 93 i 93 (250)
+
T Consensus 76 l 76 (77)
T 1ilo_A 76 L 76 (77)
T ss_dssp C
T ss_pred h
Confidence 5
No 115
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.60 E-value=1.1e-14 Score=111.00 Aligned_cols=86 Identities=19% Similarity=0.382 Sum_probs=74.3
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCC----------------------ChhHHHhhCCCccC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAI----------------------RPSILSKYGVHGFP 67 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~----------------------~~~l~~~~~I~~~P 67 (250)
.+++++|.||++||++|+.+.|.++++++.++++.++.+ +++. ..+++++|+|.++|
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P 101 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGI-ATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQP 101 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEE-ECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCCCcEEEEE-EcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCC
Confidence 578999999999999999999999999999986555555 4444 67899999999999
Q ss_pred eEEEE--eCceeEEEe---CCCCHHHHHHHHHHhh
Q 025648 68 TLFLL--NSSMRVRYH---GSRTLDSLVAFYSDVT 97 (250)
Q Consensus 68 Ti~l~--~g~~~~~~~---G~~~~~~l~~fi~~~~ 97 (250)
|++++ +|+.+ ++. |..+.++|.++|++.+
T Consensus 102 ~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 102 AFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp EEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred EEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 99999 67777 999 9999999999998864
No 116
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.59 E-value=1.8e-14 Score=109.48 Aligned_cols=87 Identities=16% Similarity=0.353 Sum_probs=75.1
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcC-----------------------CCChhHHHhhCCCcc
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES-----------------------AIRPSILSKYGVHGF 66 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~-----------------------~~~~~l~~~~~I~~~ 66 (250)
.+++++|.||++||++|+.+.|.++++.+.++++.++.+. + +....++++|+|.++
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~ 102 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVA-GLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQ 102 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEE-CSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcCCeEEEEEe-CCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCC
Confidence 5789999999999999999999999999999865555553 3 345789999999999
Q ss_pred CeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 67 PTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 67 PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
||++++ +|+.+ ++.|..+.++|.++|++.++
T Consensus 103 P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 103 PAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp SEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred ceEEEECCCCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 999999 67777 99999999999999998764
No 117
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.58 E-value=1.2e-14 Score=111.76 Aligned_cols=84 Identities=20% Similarity=0.411 Sum_probs=72.5
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcC--CCCEEEEEcC-------------------------CCChhHHHhhC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEES-------------------------AIRPSILSKYG 62 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~--~~~~v~~~d~-------------------------~~~~~l~~~~~ 62 (250)
.+++++|.||++||++|+.+.|.++++.+.++ ++.++.+ ++ +....++++|+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v-~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTV-NLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEE-ECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEE-EccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC
Confidence 78899999999999999999999999999998 3444444 33 33668999999
Q ss_pred CCccCeEEEE--eCceeEEEeCCCCHHHHHHHHH
Q 025648 63 VHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYS 94 (250)
Q Consensus 63 I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~ 94 (250)
|.++||++++ +|+.+.++.|..+.++|.++|+
T Consensus 112 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 112 IITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp CCEESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred cCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 9999999999 7888899999999999998873
No 118
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.58 E-value=3.5e-16 Score=144.30 Aligned_cols=78 Identities=23% Similarity=0.313 Sum_probs=65.9
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--------CCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCc--ee
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--------IPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSS--MR 77 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--------~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~--~~ 77 (250)
+.+++++|+|||+||++|+.+.|.|+++++.+++ .+.+..+|++++++++++|+|.++||+++| +|+ .+
T Consensus 40 ~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V~~~PTlilf~~gg~~~~ 119 (470)
T 3qcp_A 40 APLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDINFVPRLFFFYPRDSCRS 119 (470)
T ss_dssp GGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTCCSSCEEEEEEESSCCCT
T ss_pred CCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCCCccCeEEEEECCCceEE
Confidence 3457999999999999999999999999999972 367777899999999999999999999999 443 35
Q ss_pred EEEeCCCCH
Q 025648 78 VRYHGSRTL 86 (250)
Q Consensus 78 ~~~~G~~~~ 86 (250)
.+|.|.++.
T Consensus 120 ~~y~G~r~~ 128 (470)
T 3qcp_A 120 NEECGTSSL 128 (470)
T ss_dssp TSCCCCCCE
T ss_pred EEeeCCCCH
Confidence 667775443
No 119
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.58 E-value=8e-15 Score=125.15 Aligned_cols=127 Identities=20% Similarity=0.176 Sum_probs=93.8
Q ss_pred ccCCCeEEEEEE--cCCChhHHhhhHHHHHHHHHcC---CCCEEEEEcCCC-----ChhHHHhhCCC--ccCeEEEEeCc
Q 025648 8 KNSHEYVAVLFY--ASWCPFSRNFRPSFSVLSSLYS---SIPHFAIEESAI-----RPSILSKYGVH--GFPTLFLLNSS 75 (250)
Q Consensus 8 ~~~~~~vlV~Fy--a~wC~~C~~~~p~~e~la~~~~---~~~~v~~~d~~~-----~~~l~~~~~I~--~~PTi~l~~g~ 75 (250)
.+.+++|+|+|| ||||+ +.|.|+++++.+. +.+.|+.+||++ ++++|++|+|+ ++||+++|.|+
T Consensus 30 i~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~~PTl~~F~G~ 105 (248)
T 2c0g_A 30 VERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKNFPSIFLFKGN 105 (248)
T ss_dssp HTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTSCCEEEEESSS
T ss_pred HhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCCCCeEEEEeCC
Confidence 356789999999 99998 9999999999984 356788889888 89999999999 99999999744
Q ss_pred --eeEEE--eCCCCHHHHHHHHHHhhCCCCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHH
Q 025648 76 --MRVRY--HGSRTLDSLVAFYSDVTGMNTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALAT 151 (250)
Q Consensus 76 --~~~~~--~G~~~~~~l~~fi~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~ 151 (250)
.+.+| .|.++.++|.+||.+.++.... .+..++.+ +.+. ..+.. .|+.+++.+ .+..++++.
T Consensus 106 ~~~~~~y~~~G~~~~~~L~~fi~~~~~~~~~--~~g~i~~~------d~l~--~~f~~--~~~~~~~~~--~~~~~~~~~ 171 (248)
T 2c0g_A 106 ADEYVQLPSHVDVTLDNLKAFVSANTPLYIG--RDGCIKEF------NEVL--KNYAN--IPDAEQLKL--IEKLQAKQE 171 (248)
T ss_dssp SSSEEECCTTSCCCHHHHHHHHHHHSSCCCC--CTTCCHHH------HHHH--TTGGG--SCHHHHHHH--HHHHHHHHH
T ss_pred cCcceeecccCCCCHHHHHHHHHHhhccccC--CCCchHHH------HHHH--HHHhc--ccchhHHHH--HHHHHHHHH
Confidence 36788 8999999999999999873311 11111111 1110 01112 577778887 777776665
Q ss_pred H
Q 025648 152 A 152 (250)
Q Consensus 152 ~ 152 (250)
.
T Consensus 172 ~ 172 (248)
T 2c0g_A 172 Q 172 (248)
T ss_dssp H
T ss_pred H
Confidence 4
No 120
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.57 E-value=1.3e-14 Score=114.42 Aligned_cols=90 Identities=14% Similarity=0.237 Sum_probs=75.1
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcC--CCCEEEEE---------------------------cCCCChhHHH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS--SIPHFAIE---------------------------ESAIRPSILS 59 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~--~~~~v~~~---------------------------d~~~~~~l~~ 59 (250)
..+++++|+||++||++|+.+.|.++++++.|+ ++.++.+. +.+.+.++++
T Consensus 36 ~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 115 (164)
T 2h30_A 36 KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQ 115 (164)
T ss_dssp CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHH
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHH
Confidence 357899999999999999999999999998863 33333331 2334578999
Q ss_pred hhCCCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 60 KYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 60 ~~~I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
+|+|.++||++++ +|+.+.++.|..+.++|.++|++.+.
T Consensus 116 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 116 NLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp HTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred HcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 9999999999999 78888999999999999999998765
No 121
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.57 E-value=2.2e-15 Score=140.37 Aligned_cols=92 Identities=27% Similarity=0.531 Sum_probs=77.3
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcC-C--CCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCce--eEEEe
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS-S--IPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSM--RVRYH 81 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~-~--~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~--~~~~~ 81 (250)
.+.+++++|+||||||++|+.+.|.|+++++.++ + .+.+..+|++.+... . |+|+++||+++| +|+. +.+|.
T Consensus 373 ~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~~~Pt~~~~~~G~~~~~~~~~ 450 (504)
T 2b5e_A 373 NDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVIEGYPTIVLYPGGKKSESVVYQ 450 (504)
T ss_dssp HCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCSSSSEEEEECCTTSCCCCBCC
T ss_pred ccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCceecCeEEEEeCCceecceEec
Confidence 4568899999999999999999999999999886 2 345555576665543 4 999999999999 7776 78999
Q ss_pred CCCCHHHHHHHHHHhhCCCC
Q 025648 82 GSRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 82 G~~~~~~l~~fi~~~~~~~~ 101 (250)
|.++.++|.+||.+......
T Consensus 451 G~~~~~~l~~~i~~~~~~~~ 470 (504)
T 2b5e_A 451 GSRSLDSLFDFIKENGHFDV 470 (504)
T ss_dssp SCCCHHHHHHHHHHHCTTCC
T ss_pred CCCCHHHHHHHHHhcCCCCC
Confidence 99999999999999876553
No 122
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.57 E-value=2.1e-14 Score=112.22 Aligned_cols=91 Identities=18% Similarity=0.204 Sum_probs=75.6
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCC------------------------CChhHHHhhC-
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA------------------------IRPSILSKYG- 62 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~------------------------~~~~l~~~~~- 62 (250)
.+++++|.||++||++|+.+.|.++++++.+.+ +.++.+ +++ ....++++|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGI-ALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGN 101 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEE-ESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEE-ECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCC
Confidence 578999999999999999999999999999854 334443 333 2356888999
Q ss_pred -CCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCCCC
Q 025648 63 -VHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 63 -I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~~~ 101 (250)
|.++||++++ +|+.+.++.|..+.++|.++|++......
T Consensus 102 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~~ 143 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKCR 143 (151)
T ss_dssp CSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC--
T ss_pred ccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHhh
Confidence 9999999999 78889999999999999999999876543
No 123
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.56 E-value=1.1e-14 Score=123.69 Aligned_cols=86 Identities=16% Similarity=0.273 Sum_probs=75.6
Q ss_pred ccCCCeEEEEEEc--CCChhHHhhhHHHHHHHHHcCC--CCEEEEEc-----CCCChhHHHhhCCC--ccCeEEEE-eCc
Q 025648 8 KNSHEYVAVLFYA--SWCPFSRNFRPSFSVLSSLYSS--IPHFAIEE-----SAIRPSILSKYGVH--GFPTLFLL-NSS 75 (250)
Q Consensus 8 ~~~~~~vlV~Fya--~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d-----~~~~~~l~~~~~I~--~~PTi~l~-~g~ 75 (250)
++.+++|+|+||| |||+ +.|.|+++++.+.+ .+.|+.+| |+.++++|++|+|+ ++||+++| +|+
T Consensus 19 i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~PTl~~f~~G~ 94 (240)
T 2qc7_A 19 IPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGD 94 (240)
T ss_dssp GGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGCSEEEEEETTC
T ss_pred HcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCCCEEEEEeCCC
Confidence 3567899999999 9999 99999999999863 45666667 66689999999999 99999999 776
Q ss_pred --eeEEEeCCCCHHHHHHHHHHhh
Q 025648 76 --MRVRYHGSRTLDSLVAFYSDVT 97 (250)
Q Consensus 76 --~~~~~~G~~~~~~l~~fi~~~~ 97 (250)
.+.+|.|.++.++|.+||.+.+
T Consensus 95 ~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 95 FENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp SSCCEECCSCSCHHHHHHHHHHTT
T ss_pred cCcceeecCCCCHHHHHHHHHHhc
Confidence 5789999999999999999986
No 124
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.56 E-value=3.1e-14 Score=111.73 Aligned_cols=91 Identities=14% Similarity=0.246 Sum_probs=75.7
Q ss_pred CCCeEEEEEEcCCChhHHhh-hHHHHHHHHHcCC--CCEEEEEc---------------------------CCCCh----
Q 025648 10 SHEYVAVLFYASWCPFSRNF-RPSFSVLSSLYSS--IPHFAIEE---------------------------SAIRP---- 55 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~-~p~~e~la~~~~~--~~~v~~~d---------------------------~~~~~---- 55 (250)
.+++++|.||++||++|+.. .|.++++.+.|++ +.++.+.- .+...
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 47899999999999999996 9999999999984 44444421 11122
Q ss_pred -hHHHhhCCCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCCC
Q 025648 56 -SILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTGMN 100 (250)
Q Consensus 56 -~l~~~~~I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~~ 100 (250)
.+++.|+|.++|+++++ +|+.+.++.|..+.++|.+.|++.+...
T Consensus 107 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~~ 154 (158)
T 3eyt_A 107 PRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGEA 154 (158)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTSC
T ss_pred HHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhccC
Confidence 58999999999999999 7888899999999999999999988643
No 125
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.56 E-value=4.5e-14 Score=111.34 Aligned_cols=92 Identities=21% Similarity=0.357 Sum_probs=76.6
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCC-CEEEEEcCCCChhHHHhh---------------------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI-PHFAIEESAIRPSILSKY--------------------------- 61 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~-~~v~~~d~~~~~~l~~~~--------------------------- 61 (250)
.+++++|.||++||++|+.+.|.++++.+.+++. ..+..++++..++...+|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 5789999999999999999999999999999863 444444666666666666
Q ss_pred CCCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCCCC
Q 025648 62 GVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 62 ~I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~~~ 101 (250)
+|.++|+++++ +|+.+.++.|..+.++|.++|++.+....
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~~ 154 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGAKA 154 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC---
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhhhc
Confidence 89999999999 78888899999999999999999987543
No 126
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.56 E-value=3.3e-14 Score=111.70 Aligned_cols=90 Identities=16% Similarity=0.234 Sum_probs=75.6
Q ss_pred CCCeEEEEEEcCCChhHHh-hhHHHHHHHHHcCC--CCEEEEEc---------------------------CCCChh---
Q 025648 10 SHEYVAVLFYASWCPFSRN-FRPSFSVLSSLYSS--IPHFAIEE---------------------------SAIRPS--- 56 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~-~~p~~e~la~~~~~--~~~v~~~d---------------------------~~~~~~--- 56 (250)
.+++++|.||++||++|+. +.|.++++.+.|++ +.++.+.- .+....
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 4789999999999999999 59999999999986 44444421 122333
Q ss_pred ---HHHhhCCCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCC
Q 025648 57 ---ILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTGM 99 (250)
Q Consensus 57 ---l~~~~~I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~ 99 (250)
++++|+|.++|+++++ +|+.+.++.|..+.++|.+.|++.+..
T Consensus 109 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 109 IPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred hhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 8999999999999999 788899999999999999999998864
No 127
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.56 E-value=2.9e-14 Score=111.46 Aligned_cols=88 Identities=16% Similarity=0.345 Sum_probs=77.2
Q ss_pred CeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcC---------------------------CCChhHHHhhCCC
Q 025648 12 EYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES---------------------------AIRPSILSKYGVH 64 (250)
Q Consensus 12 ~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~---------------------------~~~~~l~~~~~I~ 64 (250)
++++|.||++||++|+.+.|.++++.+.+ ++.++.+. + +....++++|+|.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~v~~v~v~-~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-GVPFYVIS-REPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVL 108 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-CCCEEEEE-CCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-CCeEEEEe-CCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCC
Confidence 89999999999999999999999999999 76666553 3 2557889999999
Q ss_pred ccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCCCC
Q 025648 65 GFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 65 ~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~~~ 101 (250)
++|+++++ +|+.+.++.|..+.++|.++|++..+.+.
T Consensus 109 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~ 147 (154)
T 3ia1_A 109 GQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADLE 147 (154)
T ss_dssp SSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC-
T ss_pred cccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCccc
Confidence 99999999 78888999999999999999999887553
No 128
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.55 E-value=3.5e-14 Score=110.72 Aligned_cols=91 Identities=19% Similarity=0.309 Sum_probs=76.2
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCCC----------------------ChhHHHhhCCCc
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI----------------------RPSILSKYGVHG 65 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~~----------------------~~~l~~~~~I~~ 65 (250)
.+++++|.||++||++|+.+.|.++++.+.+++ +.++.+ +.+. +..++++|+|.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v-~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAV-NVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEE-EESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEE-ECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCC
Confidence 578999999999999999999999999999875 344444 3332 458999999999
Q ss_pred cCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCCCC
Q 025648 66 FPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 66 ~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~~~ 101 (250)
+||++++ +|+.+.++.|..+.++|.++|++.+....
T Consensus 104 ~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~~ 141 (151)
T 2f9s_A 104 LPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGET 141 (151)
T ss_dssp SCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC--
T ss_pred CCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhhh
Confidence 9999999 78888899999999999999999876543
No 129
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.54 E-value=4.4e-14 Score=107.06 Aligned_cols=87 Identities=17% Similarity=0.323 Sum_probs=73.9
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC-CCEEEEEc---------------------------CCCChhHHHhh
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS-IPHFAIEE---------------------------SAIRPSILSKY 61 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~-~~~v~~~d---------------------------~~~~~~l~~~~ 61 (250)
.+++++|.||++||++|+.+.|.++++.+.+++ +..+.++. .+....++++|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 578999999999999999999999999999875 44444421 23356799999
Q ss_pred CCCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHh
Q 025648 62 GVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDV 96 (250)
Q Consensus 62 ~I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~ 96 (250)
+|.++||++++ +|+.+.++.|..+.++|.++|++.
T Consensus 101 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 101 GVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp TCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred CcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 99999999999 788889999999999999999864
No 130
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.53 E-value=2.1e-14 Score=110.76 Aligned_cols=92 Identities=10% Similarity=0.187 Sum_probs=80.4
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCc--cCeEEEE-e-CceeEEEe--
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHG--FPTLFLL-N-SSMRVRYH-- 81 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~--~PTi~l~-~-g~~~~~~~-- 81 (250)
.+.+.+++|+|||+ |++|+.+.|.++++|++|++...+..+|.+++++++++|||++ +||+++| + ++...++.
T Consensus 20 ~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~~~~~g~~~~~~~~ 98 (133)
T 2djk_A 20 MSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQEVAKNQKFPFDQE 98 (133)
T ss_dssp HHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEECTTTCCBCCCCSS
T ss_pred hcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEEEEecCcCcccCCCCc
Confidence 34678999999999 8999999999999999999888888889999999999999999 9999999 4 23335665
Q ss_pred CCCCHHHHHHHHHHhhCCC
Q 025648 82 GSRTLDSLVAFYSDVTGMN 100 (250)
Q Consensus 82 G~~~~~~l~~fi~~~~~~~ 100 (250)
|..+.+.|.+||++.+.-+
T Consensus 99 g~~~~~~l~~fi~~~l~Gk 117 (133)
T 2djk_A 99 KEITFEAIKAFVDDFVAGK 117 (133)
T ss_dssp SCCCHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHHHcCC
Confidence 9999999999999987543
No 131
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.53 E-value=3.5e-14 Score=110.58 Aligned_cols=92 Identities=17% Similarity=0.375 Sum_probs=76.9
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCC-CEEEEEcCCCCh-----------------------hHHHhhCCCc
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI-PHFAIEESAIRP-----------------------SILSKYGVHG 65 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~-~~v~~~d~~~~~-----------------------~l~~~~~I~~ 65 (250)
.+++++|.||++||++|+.+.|.++++.+.+++. ..+..++++... .++++|+|.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 5789999999999999999999999999999762 333333444433 7899999999
Q ss_pred cCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCCCC
Q 025648 66 FPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 66 ~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~~~ 101 (250)
+||++++ +|+.+.++.|..+.++|.++|++..+.+.
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~ 146 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLEG 146 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCCS
T ss_pred CCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhcccc
Confidence 9999999 67788888898999999999999987653
No 132
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.53 E-value=5.7e-14 Score=111.59 Aligned_cols=88 Identities=22% Similarity=0.252 Sum_probs=74.2
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEE----------------------cCCCChhHHHhhCCCcc
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIE----------------------ESAIRPSILSKYGVHGF 66 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~----------------------d~~~~~~l~~~~~I~~~ 66 (250)
..+++++|+||++||++|+.+.|.++++++. ++.++.+. ..+.+..++.+|+|.++
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 126 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGA 126 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSS
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCcccc
Confidence 4788999999999999999999999999987 55555553 13456789999999999
Q ss_pred CeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 67 PTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 67 PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
|+++++ +|+.+.++.|..+.+++.++|++.+.
T Consensus 127 P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 127 PETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp SEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred CEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 987777 78888899999999999999887653
No 133
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.52 E-value=2.2e-15 Score=120.63 Aligned_cols=90 Identities=11% Similarity=0.198 Sum_probs=70.5
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC-CCEEEEEcCCCChh-HHHhhCC--CccCeEEEE--eCceeEEEe
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS-IPHFAIEESAIRPS-ILSKYGV--HGFPTLFLL--NSSMRVRYH 81 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~-~~~v~~~d~~~~~~-l~~~~~I--~~~PTi~l~--~g~~~~~~~ 81 (250)
...+++++|+|||+||++|+.+.|.|+++++.++. +.++.+ +++..+. ++.+|++ .++||+++| +|+.+.++.
T Consensus 43 ~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v-~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~ 121 (164)
T 1sen_A 43 AASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMV-NLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEII 121 (164)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEE-EEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCTTCC
T ss_pred HhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEE-EecCCchHHHHHhcccCCcCCeEEEECCCCCEEEEEe
Confidence 35678999999999999999999999998776543 333332 3434444 7788888 669999999 678888888
Q ss_pred CC----------CCHHHHHHHHHHhhC
Q 025648 82 GS----------RTLDSLVAFYSDVTG 98 (250)
Q Consensus 82 G~----------~~~~~l~~fi~~~~~ 98 (250)
|. .+.++|.++|++.+.
T Consensus 122 G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 122 NENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp CTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred CCCCccchhcccCCHHHHHHHHHHHHH
Confidence 84 789999999998764
No 134
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.52 E-value=2.4e-14 Score=107.18 Aligned_cols=83 Identities=24% Similarity=0.273 Sum_probs=69.1
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChh----HHHhhCCC-ccCeEEEE-eCceeEE-Ee
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPS----ILSKYGVH-GFPTLFLL-NSSMRVR-YH 81 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~----l~~~~~I~-~~PTi~l~-~g~~~~~-~~ 81 (250)
+.+++++|+|+|+|||+|+.+.|.|+++++. +++.++ .+|.+++++ ++.+|||+ ..||+++| +|+.+.+ -.
T Consensus 22 ~~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~~v~~~-~vdVde~r~~Sn~IA~~~~V~h~sPq~il~k~G~~v~~~SH 99 (112)
T 3iv4_A 22 EENKYVFVLKHSETCPISANAYDQFNKFLYE-RDMDGY-YLIVQQERDLSDYIAKKTNVKHESPQAFYFVNGEMVWNRDH 99 (112)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHH-HTCCEE-EEEGGGGHHHHHHHHHHHTCCCCSSEEEEEETTEEEEEEEG
T ss_pred hcCCCEEEEEECCcCHhHHHHHHHHHHHhcc-CCceEE-EEEeecCchhhHHHHHHhCCccCCCeEEEEECCEEEEEeec
Confidence 3489999999999999999999999999986 444444 446667765 89999999 59999999 8888876 56
Q ss_pred CCCCHHHHHHHH
Q 025648 82 GSRTLDSLVAFY 93 (250)
Q Consensus 82 G~~~~~~l~~fi 93 (250)
+..+.++|.+.+
T Consensus 100 ~~I~~~~l~~~~ 111 (112)
T 3iv4_A 100 GDINVSSLAQAE 111 (112)
T ss_dssp GGCSHHHHHHHT
T ss_pred cccCHHHHHHhh
Confidence 788999888765
No 135
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.52 E-value=8.2e-14 Score=108.59 Aligned_cols=91 Identities=14% Similarity=0.214 Sum_probs=77.6
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEE----------------------cCCCChhHHHhhCCCc
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIE----------------------ESAIRPSILSKYGVHG 65 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~----------------------d~~~~~~l~~~~~I~~ 65 (250)
.+++++|.||++||++|+.+.|.++++++.+++ +.++.+. ..+....+++.|+|.+
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 578999999999999999999999999999875 3344332 2345678999999999
Q ss_pred cCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCCC
Q 025648 66 FPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTGMN 100 (250)
Q Consensus 66 ~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~~ 100 (250)
+||++++ +|+.+.++.|..+.++|.++|++.+...
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 143 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNS 143 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHCC
T ss_pred cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence 9999999 7888889999999999999999987644
No 136
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.50 E-value=1.5e-13 Score=106.90 Aligned_cols=90 Identities=27% Similarity=0.420 Sum_probs=73.9
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCCCCh----------------------hHHHhhCCCc
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAIRP----------------------SILSKYGVHG 65 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~~~~----------------------~l~~~~~I~~ 65 (250)
.+++++|.||++||++|+.+.|.++++.+.+++ +.++.+ +.+... .+++.|+|.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v-~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 105 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAV-NLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG 105 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEE-ECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEE-ECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC
Confidence 578999999999999999999999999999976 334443 444333 7889999999
Q ss_pred cCeEEEE--eCceeEEEeCCC--CHHHHHHHHHHhhCCC
Q 025648 66 FPTLFLL--NSSMRVRYHGSR--TLDSLVAFYSDVTGMN 100 (250)
Q Consensus 66 ~PTi~l~--~g~~~~~~~G~~--~~~~l~~fi~~~~~~~ 100 (250)
+||++++ +|+.+.++.|.. +.++|.++|++.++..
T Consensus 106 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 106 MPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp SSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred CCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccc
Confidence 9999999 788888999964 5689999999987654
No 137
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.50 E-value=1.1e-13 Score=108.17 Aligned_cols=87 Identities=20% Similarity=0.290 Sum_probs=72.9
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEE----------------------cCCCChhHHHhhCCCccC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIE----------------------ESAIRPSILSKYGVHGFP 67 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~----------------------d~~~~~~l~~~~~I~~~P 67 (250)
.+++++|.||++||++|+.+.|.++++.+. +++.++.+. ..+....++++|+|.++|
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 119 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD-KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVP 119 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC-TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSSC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCccC
Confidence 478999999999999999999999999887 445555543 123456899999999999
Q ss_pred eEEEE--eCceeEEEeCCCCHHHHHHHHHHhh
Q 025648 68 TLFLL--NSSMRVRYHGSRTLDSLVAFYSDVT 97 (250)
Q Consensus 68 Ti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~ 97 (250)
+++++ +|+.+.++.|..+.++|.++|++.+
T Consensus 120 ~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 120 ETFVVGREGTIVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp EEEEECTTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred eEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 88888 7888889999999999999998875
No 138
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.50 E-value=1.8e-14 Score=114.08 Aligned_cols=89 Identities=12% Similarity=0.171 Sum_probs=67.1
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHH---HHcC-CCCEEEEEcCCCChhHHHhhCCCccCeEEEE--eCceeEEEe
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLS---SLYS-SIPHFAIEESAIRPSILSKYGVHGFPTLFLL--NSSMRVRYH 81 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la---~~~~-~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~--~g~~~~~~~ 81 (250)
...+++++|+|||+||++|+.+.|.+.+.. +... +.+.+.++ ++..+++.+|+|.++||+++| +|+.+.+..
T Consensus 41 ~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD--~e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~ 118 (151)
T 3ph9_A 41 QKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLM--HETTDKNLSPDGQYVPRIMFVDPSLTVRADIA 118 (151)
T ss_dssp HHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEES--SCCSCGGGCTTCCCSSEEEEECTTSCBCTTCC
T ss_pred HHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEec--CCchhhHhhcCCCCCCEEEEECCCCCEEEEEe
Confidence 456899999999999999999999998643 2222 35555554 234567889999999999999 688888888
Q ss_pred CC----------CCHHHHHHHHHHhhC
Q 025648 82 GS----------RTLDSLVAFYSDVTG 98 (250)
Q Consensus 82 G~----------~~~~~l~~fi~~~~~ 98 (250)
|. .+.+++++.+++.+.
T Consensus 119 G~~~~~~~~~~~~~~~~ll~~~~~al~ 145 (151)
T 3ph9_A 119 GRYSNRLYTYEPRDLPLLIENMKKALR 145 (151)
T ss_dssp CSCTTSTTCCCGGGHHHHHHHHHHHHS
T ss_pred CCcCCcccccchhhHHHHHHHHHHHHH
Confidence 87 445667777766553
No 139
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.50 E-value=3.1e-14 Score=114.52 Aligned_cols=83 Identities=16% Similarity=0.211 Sum_probs=64.9
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhC---CCccCeEEEE-e-CceeEEEeCCC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYG---VHGFPTLFLL-N-SSMRVRYHGSR 84 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~---I~~~PTi~l~-~-g~~~~~~~G~~ 84 (250)
.+++++|.|||+|||+|+.+.|.++++++.++++ .+..++.+++++++.+|+ |.++||++++ + |+.+.++ |.+
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~v-~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~~~~~~-g~~ 130 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNI-ELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNLLGRF-VER 130 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTE-EEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCCEEEEE-ESS
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCc-EEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCCEEEEE-cCC
Confidence 5789999999999999999999999999998764 444556667788899997 9999999999 4 4665565 555
Q ss_pred CHHHHHHHHHH
Q 025648 85 TLDSLVAFYSD 95 (250)
Q Consensus 85 ~~~~l~~fi~~ 95 (250)
. ..+.+.+.+
T Consensus 131 p-~~~~~~i~~ 140 (167)
T 1z6n_A 131 P-QAVLDGGPQ 140 (167)
T ss_dssp C-HHHHHHCHH
T ss_pred C-HHHHHhHHH
Confidence 4 344455544
No 140
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.50 E-value=4e-14 Score=109.34 Aligned_cols=88 Identities=16% Similarity=0.264 Sum_probs=73.3
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCC-CEEEEEcCCCChh-------------------------HHHhhCC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI-PHFAIEESAIRPS-------------------------ILSKYGV 63 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~-~~v~~~d~~~~~~-------------------------l~~~~~I 63 (250)
.+++++|.||++||++|+.+.|.++++.+.+++. ..+..++++..++ ++++|+|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 5789999999999999999999999999999763 3333345555554 9999999
Q ss_pred CccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhh
Q 025648 64 HGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVT 97 (250)
Q Consensus 64 ~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~ 97 (250)
.++|+++++ +|+.+.++.|..+.+++.+.+.+.+
T Consensus 110 ~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 110 YATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp CSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHHh
Confidence 999999999 7888889989888888888877654
No 141
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.48 E-value=1.3e-13 Score=106.47 Aligned_cols=86 Identities=19% Similarity=0.289 Sum_probs=69.1
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHc-CCC-CEEEEEcCCC-------------------------ChhHHHhhC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLY-SSI-PHFAIEESAI-------------------------RPSILSKYG 62 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~-~~~-~~v~~~d~~~-------------------------~~~l~~~~~ 62 (250)
.+++++|.||++||++|+.+.|.++++.+.+ ++. ..+..++.+. ...++++|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 6789999999999999999999999999999 652 3333334443 458999999
Q ss_pred CCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 63 VHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 63 I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
|.++||++++ +|+.+.++. +.++|.++|++.+.
T Consensus 112 v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 112 ILTLPTNILLSPTGKILARDI---QGEALTGKLKELLK 146 (148)
T ss_dssp CCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHC-
T ss_pred CCCcCEEEEECCCCeEEEecC---CHHHHHHHHHHHHc
Confidence 9999999999 566655554 89999999998764
No 142
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.48 E-value=8.5e-14 Score=103.78 Aligned_cols=76 Identities=16% Similarity=0.154 Sum_probs=66.1
Q ss_pred eEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHHHHH
Q 025648 13 YVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSLVA 91 (250)
Q Consensus 13 ~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~l~~ 91 (250)
..+++|+++||++|+.+.|.+++++++++ ..+..+|.++++++..+|+++ +||+++| +|+.+ +.|..+.++|.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v--~~g~~~~~~L~~ 104 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL--CHYFLDSDVIGA 104 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE--ECSSCCCHHHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE--EecCCCHHHHHH
Confidence 67999999999999999999999999985 455566888899999999997 9999998 77765 458889999998
Q ss_pred HH
Q 025648 92 FY 93 (250)
Q Consensus 92 fi 93 (250)
+|
T Consensus 105 ~L 106 (107)
T 2fgx_A 105 YL 106 (107)
T ss_dssp HH
T ss_pred Hh
Confidence 87
No 143
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.47 E-value=3.2e-13 Score=108.75 Aligned_cols=87 Identities=18% Similarity=0.308 Sum_probs=73.6
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEE----------------------cCCCChhHHHhhCCCccC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIE----------------------ESAIRPSILSKYGVHGFP 67 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~----------------------d~~~~~~l~~~~~I~~~P 67 (250)
.+++++|.||++||++|+.+.|.++++.+. ++.++.+. -.+....++++|+|.++|
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 134 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ--GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAP 134 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCC
Confidence 478999999999999999999999999987 55555553 123456889999999999
Q ss_pred eEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 68 TLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 68 Ti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
+++++ +|+.+.++.|..+.+++.+.|.+.+.
T Consensus 135 ~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 135 ETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp EEEEECTTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred eEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 99888 78888999999999999998887753
No 144
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.47 E-value=2.6e-13 Score=106.07 Aligned_cols=87 Identities=17% Similarity=0.246 Sum_probs=69.5
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCC-CEEEEEcCCC-------------------------ChhHHHhhCC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI-PHFAIEESAI-------------------------RPSILSKYGV 63 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~-~~v~~~d~~~-------------------------~~~l~~~~~I 63 (250)
.+++++|.||++||++|+.+.|.++++.+.|++. ..+..++++. ...++++|+|
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 5789999999999999999999999999999763 3333335544 4678999999
Q ss_pred CccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCC
Q 025648 64 HGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTGM 99 (250)
Q Consensus 64 ~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~ 99 (250)
.++||++++ +|+.+.++. +.++|.++|++.+..
T Consensus 108 ~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l~~~ 142 (152)
T 2lrn_A 108 VGFPHIILVDPEGKIVAKEL---RGDDLYNTVEKFVNG 142 (152)
T ss_dssp CSSCEEEEECTTSEEEEECC---CTTHHHHHHHHHHTS
T ss_pred CcCCeEEEECCCCeEEEeeC---CHHHHHHHHHHHHhh
Confidence 999999999 666666653 456788888887654
No 145
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.46 E-value=3.4e-13 Score=108.71 Aligned_cols=89 Identities=10% Similarity=0.146 Sum_probs=73.1
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCC-C------EEEEEcCCC-ChhHHHhh--------------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSI-P------HFAIEESAI-RPSILSKY-------------------- 61 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~-~------~v~~~d~~~-~~~l~~~~-------------------- 61 (250)
.+++++|.||++||++|+.+.|.++++.+.|++. . .+..++++. .++..++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 5789999999999999999999999999998753 2 343445555 56555555
Q ss_pred -----CCCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 62 -----GVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 62 -----~I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
+|.++|+++++ +|+.+.++.|..+.++|.++|++.+.
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 78999998888 78888999999999999999998763
No 146
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.46 E-value=5.1e-13 Score=104.12 Aligned_cols=91 Identities=21% Similarity=0.353 Sum_probs=72.0
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC-CCEEEEEcCCCC-----------------------hhHHHhhCCCc
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS-IPHFAIEESAIR-----------------------PSILSKYGVHG 65 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~-~~~v~~~d~~~~-----------------------~~l~~~~~I~~ 65 (250)
.+++++|.||++||++|+.+.|.++++.+.+++ ...+..++.+.. ..++++|+|.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 678999999999999999999999999999986 223333344332 45889999999
Q ss_pred cCeEEEE--eCceeEEEeCCC--CHHHHHHHHHHhhCCC
Q 025648 66 FPTLFLL--NSSMRVRYHGSR--TLDSLVAFYSDVTGMN 100 (250)
Q Consensus 66 ~PTi~l~--~g~~~~~~~G~~--~~~~l~~fi~~~~~~~ 100 (250)
+|+++++ +|+.+.++.|.. +.+++.++|++..+..
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~~ 145 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSKA 145 (154)
T ss_dssp BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC----
T ss_pred CCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHHHh
Confidence 9988888 788888999976 6789999999876543
No 147
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.45 E-value=5.6e-13 Score=104.91 Aligned_cols=89 Identities=25% Similarity=0.545 Sum_probs=72.8
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCCC-------------------ChhHHHhhCCCccCe
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI-------------------RPSILSKYGVHGFPT 68 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~~-------------------~~~l~~~~~I~~~PT 68 (250)
.+++++|.||++||++|+.+.|.++++.+.+++ +.++.+ +.+. ..+++++|+|.++|+
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v-~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 118 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAV-NVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPD 118 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEE-ECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEE-eCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcce
Confidence 578999999999999999999999999999973 444444 4433 578999999999999
Q ss_pred EEEE--eCceeEEEeCCC--CHHHHHHHHHHhhCC
Q 025648 69 LFLL--NSSMRVRYHGSR--TLDSLVAFYSDVTGM 99 (250)
Q Consensus 69 i~l~--~g~~~~~~~G~~--~~~~l~~fi~~~~~~ 99 (250)
++++ +|+.+.++.|.. +.+++++.+.+..+.
T Consensus 119 ~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 119 TFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGH 153 (158)
T ss_dssp EEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC--
T ss_pred EEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccc
Confidence 9988 788889999964 678888888776553
No 148
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.45 E-value=4.6e-13 Score=105.93 Aligned_cols=86 Identities=23% Similarity=0.419 Sum_probs=70.5
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCC------------------CC-----------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA------------------IR----------------- 54 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~------------------~~----------------- 54 (250)
.+++++|.||++||++|+.+.|.++++.+.++++.++.+ +++ ..
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~~v~vv~i-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYREISVIAI-DFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEE-ECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcCCcEEEEE-EecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 578999999999999999999999999999996555544 343 22
Q ss_pred -----hhHHHhhCCCccCeEEEE--eCceeEEEeCCC-CHHHHHHHHHHhhC
Q 025648 55 -----PSILSKYGVHGFPTLFLL--NSSMRVRYHGSR-TLDSLVAFYSDVTG 98 (250)
Q Consensus 55 -----~~l~~~~~I~~~PTi~l~--~g~~~~~~~G~~-~~~~l~~fi~~~~~ 98 (250)
.+++++|+|.++||++++ +|+.+. .|.. +.++|.+.|++.++
T Consensus 115 ~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY--AGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp EEECCSHHHHHTTCCSSSEEEEEETTCCEEE--EEESCCHHHHHHHHHHC--
T ss_pred EEeChHHHHHHhCCCCceEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHHhc
Confidence 378999999999999999 455555 8888 99999999998753
No 149
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.45 E-value=1.2e-13 Score=99.15 Aligned_cols=74 Identities=14% Similarity=0.040 Sum_probs=62.3
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYS 94 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~ 94 (250)
+++||++||++|+.+.|.+++++..+ +..+|.+++++++++||++ +||+++.+|+.+. |..+.+.|.++|.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~l~~~~g~~-vPtl~~~~G~~v~---g~~~~~~L~~~l~ 73 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAALESAYGLR-VPVLRDPMGRELD---WPFDAPRLRAWLD 73 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHHHHHHHTTT-CSEEECTTCCEEE---SCCCHHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHHHHHHhCCC-cCeEEEECCEEEe---CCCCHHHHHHHHH
Confidence 78999999999999999999887654 3556788899999999998 9999874555553 8899999999998
Q ss_pred Hhh
Q 025648 95 DVT 97 (250)
Q Consensus 95 ~~~ 97 (250)
+.+
T Consensus 74 ~~~ 76 (87)
T 1ttz_A 74 AAP 76 (87)
T ss_dssp TCC
T ss_pred HHH
Confidence 754
No 150
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.44 E-value=4.3e-14 Score=123.05 Aligned_cols=75 Identities=19% Similarity=0.389 Sum_probs=61.6
Q ss_pred EEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEE--cC-CCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHH
Q 025648 14 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIE--ES-AIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLV 90 (250)
Q Consensus 14 vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~--d~-~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~ 90 (250)
.+|+|||||||||+++.|.|++++++++ .+.++ |. +++++++++|+|+++||+++ +|+ +|.|.++.++|.
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~---~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i-~G~---~~~G~~~~~~L~ 272 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP---YVECSPNGPGTPQAQECTEAGITSYPTWII-NGR---TYTGVRSLEALA 272 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC---EEESCSSCSSSCCCHHHHTTTCCSTTEEEE-TTE---EEESCCCHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC---EEEEeecCchhhHHHHHHHcCCcccCeEEE-CCE---EecCCCCHHHHH
Confidence 4799999999999999999999998773 33333 22 34899999999999999655 775 499999999999
Q ss_pred HHHHH
Q 025648 91 AFYSD 95 (250)
Q Consensus 91 ~fi~~ 95 (250)
+|+..
T Consensus 273 ~~l~~ 277 (291)
T 3kp9_A 273 VASGY 277 (291)
T ss_dssp HHTCC
T ss_pred HHHCC
Confidence 98754
No 151
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.42 E-value=8.3e-13 Score=103.65 Aligned_cols=85 Identities=20% Similarity=0.272 Sum_probs=68.9
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCCCChh-----------------------HHHhhCCC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAIRPS-----------------------ILSKYGVH 64 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~~~~~-----------------------l~~~~~I~ 64 (250)
.+++++|.||++||++|+...|.++++.+.|++ +.++.+ +.+...+ +.++|+|.
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i-~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 112 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQI-SLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVT 112 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEE-ECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEE-EccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcc
Confidence 468999999999999999999999999999875 344444 4444332 88999999
Q ss_pred ccCeEEEE--eCceeEEEeCCCCHHHHHHHHHH
Q 025648 65 GFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSD 95 (250)
Q Consensus 65 ~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~ 95 (250)
++||++++ +|+.+.++.|..+.++...-..+
T Consensus 113 ~~P~~~lid~~G~i~~~~~g~~~~e~~~~~~~~ 145 (152)
T 2lrt_A 113 NLPSVFLVNRNNELSARGENIKDLDEAIKKLLE 145 (152)
T ss_dssp SCSEEEEEETTTEEEEETTTCSCHHHHHHHHHG
T ss_pred cCceEEEECCCCeEEEecCCHHHHHHHHHHHHh
Confidence 99999999 78888889999888776655443
No 152
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.42 E-value=6.8e-13 Score=107.91 Aligned_cols=89 Identities=17% Similarity=0.291 Sum_probs=72.8
Q ss_pred CC-eEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcC-----------------------------CCChhHH
Q 025648 11 HE-YVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES-----------------------------AIRPSIL 58 (250)
Q Consensus 11 ~~-~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~-----------------------------~~~~~l~ 58 (250)
++ +++|+||++||++|+.+.|.++++.+.|++ +.++.+ ++ +.+..++
T Consensus 45 gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v-~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (196)
T 2ywi_A 45 SDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAI-NSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVA 123 (196)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEE-ECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHH
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEE-ECCccccccccCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 44 699999999999999999999999999875 455555 33 3456799
Q ss_pred HhhCCCccCeEEEE--eCceeEE---------EeCCCCHHHHHHHHHHhhCCC
Q 025648 59 SKYGVHGFPTLFLL--NSSMRVR---------YHGSRTLDSLVAFYSDVTGMN 100 (250)
Q Consensus 59 ~~~~I~~~PTi~l~--~g~~~~~---------~~G~~~~~~l~~fi~~~~~~~ 100 (250)
++|+|.++|+++++ +|+.+.+ +.|..+.++|.+.|++.+...
T Consensus 124 ~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 176 (196)
T 2ywi_A 124 KAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGR 176 (196)
T ss_dssp HHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTC
T ss_pred HHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCC
Confidence 99999999999999 6777766 457778999999999987544
No 153
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.41 E-value=5.5e-13 Score=102.67 Aligned_cols=85 Identities=20% Similarity=0.454 Sum_probs=63.4
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHH---HHHHcCC--CCEEEEEcCCCChh----------------------H--HHh
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSV---LSSLYSS--IPHFAIEESAIRPS----------------------I--LSK 60 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~---la~~~~~--~~~v~~~d~~~~~~----------------------l--~~~ 60 (250)
.+++++|+||++||++|+.+.|.+.+ +.+.+++ +.++.+ +.+..++ + ++.
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v-~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 104 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAI-YPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQL 104 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEE-ECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEE-EecCCHHHHHHHHHHcCCCcceeeCCccchhhHHH
Confidence 57899999999999999999999998 8888754 444444 3433332 2 348
Q ss_pred hCCCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 61 YGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 61 ~~I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
|+|.++||++++ +|+.+. +..+.++|.++|++..+
T Consensus 105 ~~v~~~P~~~lid~~G~i~~---~~~~~~~l~~~l~~~~~ 141 (142)
T 3ewl_A 105 YDIRATPTIYLLDGRKRVIL---KDTSMEQLIDYLATQAG 141 (142)
T ss_dssp SCCCSSSEEEEECTTCBEEE---CSCCHHHHHHHHHC---
T ss_pred cCCCCCCeEEEECCCCCEEe---cCCCHHHHHHHHHHHcc
Confidence 999999999999 454433 56889999999987654
No 154
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.41 E-value=9.9e-13 Score=101.57 Aligned_cols=82 Identities=16% Similarity=0.328 Sum_probs=63.7
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHH---HHHHcCC--CCEEEEEcCCCCh------------------------hHHHh
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSV---LSSLYSS--IPHFAIEESAIRP------------------------SILSK 60 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~---la~~~~~--~~~v~~~d~~~~~------------------------~l~~~ 60 (250)
.+++++|+|||+||++|+.+.|.+++ +.+.+++ +.++++ +.+... .+.+.
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i-~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 108 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSI-YPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNL 108 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEE-ECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEE-EcCCCHHHHHHHHHhcccccccccCccchhhhhhh
Confidence 46899999999999999999999999 9998854 444554 333332 25789
Q ss_pred hCCCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHH
Q 025648 61 YGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSD 95 (250)
Q Consensus 61 ~~I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~ 95 (250)
|+|.++||++++ +|+.+.+.. +.++|.++|++
T Consensus 109 ~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~e 142 (142)
T 3eur_A 109 YDLRAIPTLYLLDKNKTVLLKDA---TLQKVEQYLAE 142 (142)
T ss_dssp SCCTTCSEEEEECTTCBEEEEEE---CHHHHHHHHHC
T ss_pred cCCCcCCeEEEECCCCcEEecCC---CHHHHHHHHhC
Confidence 999999999999 666666655 47888888763
No 155
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.41 E-value=1.3e-13 Score=111.49 Aligned_cols=72 Identities=17% Similarity=0.216 Sum_probs=56.8
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHH-H--HHHHHHcCCCCEEEEEcCCCChhHHHhh--------CCCccCeEEEE--eC
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPS-F--SVLSSLYSSIPHFAIEESAIRPSILSKY--------GVHGFPTLFLL--NS 74 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~-~--e~la~~~~~~~~v~~~d~~~~~~l~~~~--------~I~~~PTi~l~--~g 74 (250)
...+++|+|+|||+||++|+.|.|. | .++++.+.+...+..+|.++.+++.+.| ||.++||++++ +|
T Consensus 36 ~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG 115 (173)
T 3ira_A 36 RKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGK 115 (173)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTS
T ss_pred HHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceeeECCCC
Confidence 4568999999999999999999993 3 4666666543344445788899999998 99999999999 56
Q ss_pred ceeEE
Q 025648 75 SMRVR 79 (250)
Q Consensus 75 ~~~~~ 79 (250)
+++..
T Consensus 116 ~~v~~ 120 (173)
T 3ira_A 116 KPFFA 120 (173)
T ss_dssp CEEEE
T ss_pred Cceee
Confidence 66554
No 156
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.39 E-value=2.1e-12 Score=104.54 Aligned_cols=91 Identities=16% Similarity=0.285 Sum_probs=71.3
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC-CCEEEEEcC-----------------------------CCChhHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS-IPHFAIEES-----------------------------AIRPSILS 59 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~-~~~v~~~d~-----------------------------~~~~~l~~ 59 (250)
.+++++|.||++||++|+...|.++++.+.|++ +.++.+ +. +....+++
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v-~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 110 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGI-NANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAK 110 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEE-ECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEE-EcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHH
Confidence 468999999999999999999999999999987 334444 33 34567899
Q ss_pred hhCCCccCeEEEE--eCceeEE--------EeCCCCHHHHHHHHHHhhCCCC
Q 025648 60 KYGVHGFPTLFLL--NSSMRVR--------YHGSRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 60 ~~~I~~~PTi~l~--~g~~~~~--------~~G~~~~~~l~~fi~~~~~~~~ 101 (250)
.|+|.++|+++++ +|+.+.+ +.|..+.++|.+.|++.+....
T Consensus 111 ~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 162 (188)
T 2cvb_A 111 AYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGEE 162 (188)
T ss_dssp HTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTCC
T ss_pred HcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCCC
Confidence 9999999999999 5655554 1123367899999999886543
No 157
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.38 E-value=4.1e-12 Score=102.48 Aligned_cols=90 Identities=21% Similarity=0.341 Sum_probs=71.4
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcC--CCCEEEEEcCCCC-----hhHHHhhCCC------------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEESAIR-----PSILSKYGVH------------------ 64 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~--~~~~v~~~d~~~~-----~~l~~~~~I~------------------ 64 (250)
.+++++|.||++||++|+.+.|.++++.+.++ ++.++.+ +.+.. ..+.+++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v-~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 137 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAI-NIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKA 137 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEE-ECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEE-ECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhcc
Confidence 57899999999999999999999999999997 3444444 33322 4566777764
Q ss_pred -----ccCeEEEE--eCceeEEEeCCCC--HHHHHHHHHHhhCCC
Q 025648 65 -----GFPTLFLL--NSSMRVRYHGSRT--LDSLVAFYSDVTGMN 100 (250)
Q Consensus 65 -----~~PTi~l~--~g~~~~~~~G~~~--~~~l~~fi~~~~~~~ 100 (250)
++|+++++ +|+.+.++.|..+ .+++.++|++.++..
T Consensus 138 ~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~~ 182 (186)
T 1jfu_A 138 IGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGKA 182 (186)
T ss_dssp TTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC--
T ss_pred ccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhccc
Confidence 89999999 7888889999764 799999999988654
No 158
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.37 E-value=1.8e-12 Score=115.98 Aligned_cols=87 Identities=13% Similarity=0.207 Sum_probs=75.0
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcC---------------------------CCChhHHHh
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES---------------------------AIRPSILSK 60 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~---------------------------~~~~~l~~~ 60 (250)
.+++++|+||++||++|+.+.|.+++++++|++ +.++.+ ++ +....++++
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~V-s~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ 159 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGV-HTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTN 159 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEE-ECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEE-ECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHH
Confidence 478999999999999999999999999999975 445554 22 234679999
Q ss_pred hCCCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhh
Q 025648 61 YGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVT 97 (250)
Q Consensus 61 ~~I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~ 97 (250)
|+|.++||++++ +|+.+.++.|..+.++|.++|++.+
T Consensus 160 ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 160 YRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp TTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred cCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 999999999999 7888999999999999999998876
No 159
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.35 E-value=5.2e-12 Score=98.36 Aligned_cols=84 Identities=14% Similarity=0.299 Sum_probs=67.5
Q ss_pred CCCeEEEEEEcCCChh--HHhhhHHHHHHHHHc-CC--CCEEEEEcCCCC-------------------------hhHHH
Q 025648 10 SHEYVAVLFYASWCPF--SRNFRPSFSVLSSLY-SS--IPHFAIEESAIR-------------------------PSILS 59 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~--C~~~~p~~e~la~~~-~~--~~~v~~~d~~~~-------------------------~~l~~ 59 (250)
.+++++|.||++||++ |+...|.++++.+.| ++ +.++.+ +.+.. ..+++
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v-~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 110 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGI-SLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAK 110 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEE-ECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEE-EcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHH
Confidence 5789999999999999 999999999999999 44 344444 33333 37899
Q ss_pred hhCCCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhh
Q 025648 60 KYGVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVT 97 (250)
Q Consensus 60 ~~~I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~ 97 (250)
+|+|.++|+++++ +|+.+.++. +.+++.+.|++.+
T Consensus 111 ~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll 147 (150)
T 3fw2_A 111 QYSIYKIPANILLSSDGKILAKNL---RGEELKKKIENIV 147 (150)
T ss_dssp HTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHH
T ss_pred HcCCCccCeEEEECCCCEEEEccC---CHHHHHHHHHHHH
Confidence 9999999999999 566666653 7888888888765
No 160
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.34 E-value=3.8e-12 Score=101.40 Aligned_cols=63 Identities=30% Similarity=0.449 Sum_probs=52.6
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC---CCEEEEEcCCCC------------------------hhHHHhhC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS---IPHFAIEESAIR------------------------PSILSKYG 62 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~---~~~v~~~d~~~~------------------------~~l~~~~~ 62 (250)
.+++++|+||++||++|+++.|.++++++.|++ +.++.+ +.+.. ..++++|+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 125 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILA-SWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYS 125 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE-ECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEE-ecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcC
Confidence 578999999999999999999999999999975 333333 33333 68999999
Q ss_pred CCccCeEEEEe
Q 025648 63 VHGFPTLFLLN 73 (250)
Q Consensus 63 I~~~PTi~l~~ 73 (250)
|.++||+++++
T Consensus 126 v~~~Pt~~lid 136 (165)
T 3s9f_A 126 VESIPTLIGLN 136 (165)
T ss_dssp CCSSSEEEEEE
T ss_pred CCCCCEEEEEe
Confidence 99999999993
No 161
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.32 E-value=4.2e-12 Score=93.26 Aligned_cols=85 Identities=14% Similarity=0.174 Sum_probs=67.0
Q ss_pred ccccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCC--CChhHHHhhCCCccCeEEEEeCceeEEEeCC
Q 025648 6 VHKNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA--IRPSILSKYGVHGFPTLFLLNSSMRVRYHGS 83 (250)
Q Consensus 6 ~~~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~--~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~ 83 (250)
.....+.+.+++|+++||++|+.+.|.++++++. ..+..+|.+ +++++.++|| .++|+++ .+|+.+ ..+.
T Consensus 10 ~~~~~~~~~v~~f~~~~C~~C~~~~~~L~~l~~~----i~~~~vdi~~~~~~el~~~~g-~~vP~l~-~~g~~~--~~~g 81 (100)
T 1wjk_A 10 SASNRALPVLTLFTKAPCPLCDEAKEVLQPYKDR----FILQEVDITLPENSTWYERYK-FDIPVFH-LNGQFL--MMHR 81 (100)
T ss_dssp CCSCCCCCEEEEEECSSCHHHHHHHHHTSTTSSS----SEEEEEETTSSTTHHHHHHSS-SSCSEEE-ESSSEE--EESS
T ss_pred hhccCCCCEEEEEeCCCCcchHHHHHHHHHhhhC----CeEEEEECCCcchHHHHHHHC-CCCCEEE-ECCEEE--EecC
Confidence 3444567899999999999999999999877543 455555665 6789999999 9999873 477764 4667
Q ss_pred CCHHHHHHHHHHhhC
Q 025648 84 RTLDSLVAFYSDVTG 98 (250)
Q Consensus 84 ~~~~~l~~fi~~~~~ 98 (250)
.+.+.|.++|.+.+.
T Consensus 82 ~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 82 VNTSKLEKQLRKLSG 96 (100)
T ss_dssp CCHHHHHHHHHSSSC
T ss_pred CCHHHHHHHHHHHHh
Confidence 899999999987654
No 162
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.31 E-value=1.5e-11 Score=102.40 Aligned_cols=89 Identities=26% Similarity=0.397 Sum_probs=70.2
Q ss_pred CCC-eEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcC-----------------------------CCChhH
Q 025648 10 SHE-YVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEES-----------------------------AIRPSI 57 (250)
Q Consensus 10 ~~~-~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~-----------------------------~~~~~l 57 (250)
.++ +++|.||++||++|+...|.++++.++|++ +.++.+ +. +....+
T Consensus 57 ~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~V-s~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~ 135 (218)
T 3u5r_E 57 KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAI-NSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSV 135 (218)
T ss_dssp TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEE-ECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHH
T ss_pred CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEE-ECCcccccccCCHHHHHHHHHHhCCCccEEECCccHH
Confidence 345 599999999999999999999999999976 344444 33 345689
Q ss_pred HHhhCCCccCeEEEE--eCceeEEEeC-----------CCCHHHHHHHHHHhhCCCC
Q 025648 58 LSKYGVHGFPTLFLL--NSSMRVRYHG-----------SRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 58 ~~~~~I~~~PTi~l~--~g~~~~~~~G-----------~~~~~~l~~fi~~~~~~~~ 101 (250)
++.|+|.++|+++++ +|+.+ |.| ..+.++|.+.|++.+....
T Consensus 136 ~~~~~v~~~P~~~liD~~G~i~--~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~ 190 (218)
T 3u5r_E 136 AKAYGAACTPDFFLYDRERRLV--YHGQFDDARPGNGKDVTGADLRAAVDAVLKGKD 190 (218)
T ss_dssp HHHHTCCEESEEEEECTTCBEE--EEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCC
T ss_pred HHHcCCCCCCeEEEECCCCcEE--EeccccccccccccccCHHHHHHHHHHHHcCCC
Confidence 999999999999999 45554 443 3457999999999886543
No 163
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.31 E-value=7.4e-13 Score=98.96 Aligned_cols=80 Identities=11% Similarity=0.242 Sum_probs=60.0
Q ss_pred CCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCC-----hhHHHhhCCCccCeEEEEeCceeEEEeCCC-
Q 025648 11 HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIR-----PSILSKYGVHGFPTLFLLNSSMRVRYHGSR- 84 (250)
Q Consensus 11 ~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~-----~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~- 84 (250)
++++++ ||++||++|+.+.|.++++...| ..+.+ +.+.. ..++++|+|.++||+ +++|+.+..+.|..
T Consensus 19 ~~~vv~-f~a~~C~~C~~~~~~l~~~~~~~---~~v~v-~~~~~~~~~~~~l~~~~~v~~~Pt~-~~~g~~v~~~~~~~~ 92 (116)
T 2e7p_A 19 SAPVVV-FSKTYCGYCNRVKQLLTQVGASY---KVVEL-DELSDGSQLQSALAHWTGRGTVPNV-FIGGKQIGGCDTVVE 92 (116)
T ss_dssp SSSEEE-EECTTCHHHHHHHHHHHHHTCCC---EEEEG-GGSTTHHHHHHHHHHHHSCCSSCEE-EETTEEEECHHHHHH
T ss_pred CCCEEE-EECCCChhHHHHHHHHHHcCCCe---EEEEc-cCCCChHHHHHHHHHHhCCCCcCEE-EECCEEECChHHHHH
Confidence 345655 99999999999999999986543 22222 43333 469999999999999 44888887776654
Q ss_pred --CHHHHHHHHHHh
Q 025648 85 --TLDSLVAFYSDV 96 (250)
Q Consensus 85 --~~~~l~~fi~~~ 96 (250)
+.+.|.++|.+.
T Consensus 93 ~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 93 KHQRNELLPLLQDA 106 (116)
T ss_dssp HHHTTCHHHHHHHT
T ss_pred HHhCChHHHHHHHc
Confidence 667788888775
No 164
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.30 E-value=8.1e-12 Score=96.47 Aligned_cols=82 Identities=16% Similarity=0.180 Sum_probs=62.9
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCCC--------------------------ChhHHHhh
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI--------------------------RPSILSKY 61 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~~--------------------------~~~l~~~~ 61 (250)
.+++++|+||++||++|+.+.|.++++.+.|++ +.++++ +.+. ...+++.|
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~v-s~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 109 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSI-SMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKY 109 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEE-ECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEE-EccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHc
Confidence 568999999999999999999999999999974 344444 2221 13578999
Q ss_pred CCCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHH
Q 025648 62 GVHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSD 95 (250)
Q Consensus 62 ~I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~ 95 (250)
+|.++|+++++ +|+.+.+. .+.+++.+.+++
T Consensus 110 ~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ 142 (143)
T 4fo5_A 110 DLRKGFKNFLINDEGVIIAAN---VTPEKLTEILKA 142 (143)
T ss_dssp TGGGCCCEEEECTTSBEEEES---CCHHHHHHHHTC
T ss_pred CCCCCCcEEEECCCCEEEEcc---CCHHHHHHHHHh
Confidence 99999999999 56665553 356777777654
No 165
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.28 E-value=1.1e-11 Score=95.62 Aligned_cols=63 Identities=25% Similarity=0.386 Sum_probs=52.2
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC---CCEEEEEcCCC------------------------ChhHHHhhC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS---IPHFAIEESAI------------------------RPSILSKYG 62 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~---~~~v~~~d~~~------------------------~~~l~~~~~ 62 (250)
.+++++|+||++||++|+.+.|.++++++.+++ +.++.+ +.+. ...++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v-~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLI-SWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFD 105 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE-ECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEE-eCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcC
Confidence 578999999999999999999999999999973 333333 3333 257899999
Q ss_pred CCccCeEEEEe
Q 025648 63 VHGFPTLFLLN 73 (250)
Q Consensus 63 I~~~PTi~l~~ 73 (250)
|.++||+++++
T Consensus 106 v~~~P~~~lid 116 (144)
T 1i5g_A 106 VKSIPTLVGVE 116 (144)
T ss_dssp CCSSSEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 99999999996
No 166
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.28 E-value=1.1e-11 Score=95.43 Aligned_cols=63 Identities=27% Similarity=0.452 Sum_probs=52.0
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcC---CCCEEEEEcCCC------------------------ChhHHHhhC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYS---SIPHFAIEESAI------------------------RPSILSKYG 62 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~---~~~~v~~~d~~~------------------------~~~l~~~~~ 62 (250)
.+++++|.||++||++|+.+.|.++++++.++ ++..+.+ +.+. ...++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLI-SWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG 105 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE-ECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEE-eCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC
Confidence 57899999999999999999999999999987 2333333 3333 346899999
Q ss_pred CCccCeEEEEe
Q 025648 63 VHGFPTLFLLN 73 (250)
Q Consensus 63 I~~~PTi~l~~ 73 (250)
|.++||+++++
T Consensus 106 v~~~Pt~~lid 116 (144)
T 1o73_A 106 VESIPTLITIN 116 (144)
T ss_dssp CCSSSEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 99999999996
No 167
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.27 E-value=1.3e-11 Score=95.70 Aligned_cols=63 Identities=22% Similarity=0.411 Sum_probs=52.2
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC---CCEEEEEcCCC------------------------ChhHHHhhC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS---IPHFAIEESAI------------------------RPSILSKYG 62 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~---~~~v~~~d~~~------------------------~~~l~~~~~ 62 (250)
.+++++|+||++||++|+.+.|.++++++.+++ +.++.+ +++. ...++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v-~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFC-TWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFN 105 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE-ECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTT
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEE-eCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhC
Confidence 578999999999999999999999999999972 333333 3333 257899999
Q ss_pred CCccCeEEEEe
Q 025648 63 VHGFPTLFLLN 73 (250)
Q Consensus 63 I~~~PTi~l~~ 73 (250)
|.++||+++++
T Consensus 106 v~~~Pt~~lid 116 (146)
T 1o8x_A 106 VESIPTLIGVD 116 (146)
T ss_dssp CCSSSEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 99999999996
No 168
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.26 E-value=1.9e-11 Score=96.08 Aligned_cols=88 Identities=10% Similarity=0.149 Sum_probs=71.5
Q ss_pred CCCeEEEEEEcCCChh-HHhhhHHHHHHHHHcC------CCCEEEEEcCCCC----------------------------
Q 025648 10 SHEYVAVLFYASWCPF-SRNFRPSFSVLSSLYS------SIPHFAIEESAIR---------------------------- 54 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~-C~~~~p~~e~la~~~~------~~~~v~~~d~~~~---------------------------- 54 (250)
.+++++|.||++||++ |+...|.++++.+.++ ++.++.+ ..+..
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~v-s~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~ 100 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFI-SIDPERDTKEAIANYVKEFSPKLVGLTGTREEV 100 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEE-ESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEE-EeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHH
Confidence 4789999999999998 9999999999999884 3344444 22221
Q ss_pred hhHHHhhCCCccC---------------eEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 55 PSILSKYGVHGFP---------------TLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 55 ~~l~~~~~I~~~P---------------Ti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
..+++.|+|.+.| +++++ +|+.+.++.|..+.++|.+.|++.+.
T Consensus 101 ~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 101 DQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 2488899999999 77777 78889999999999999999988763
No 169
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.26 E-value=3.2e-11 Score=95.56 Aligned_cols=88 Identities=14% Similarity=0.154 Sum_probs=72.0
Q ss_pred CCCeEEEEEEcCCChh-HHhhhHHHHHHHHHcC------CCCEEEEEcCCC---C-------------------------
Q 025648 10 SHEYVAVLFYASWCPF-SRNFRPSFSVLSSLYS------SIPHFAIEESAI---R------------------------- 54 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~-C~~~~p~~e~la~~~~------~~~~v~~~d~~~---~------------------------- 54 (250)
.+++++|.||++||++ |+...|.++++.+.|+ ++.++.+ ..+. .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~i-s~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFI-TVDPERDDVEAMARYVQDFHPRLLGLTGSTKQV 103 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEE-ESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEE-EECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHH
Confidence 4689999999999998 9999999999999883 4444444 2321 1
Q ss_pred hhHHHhhCCCccC---------------eEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 55 PSILSKYGVHGFP---------------TLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 55 ~~l~~~~~I~~~P---------------Ti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
..+++.|+|...| +++++ +|+.+.++.|..+.++|.+.|++++.
T Consensus 104 ~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 104 AQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 2588899999988 88888 78889999999999999999998764
No 170
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.24 E-value=1.2e-11 Score=98.59 Aligned_cols=88 Identities=18% Similarity=0.234 Sum_probs=67.1
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEE----------cCCCChhHH-------------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIE----------ESAIRPSIL------------------- 58 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~----------d~~~~~~l~------------------- 58 (250)
.+++++|.|||+||++|+ ..|.++++.++|++ +.++.+. +.+...+..
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 578999999999999999 99999999999875 4444442 111111121
Q ss_pred -----------HhhCCCccC------eEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 59 -----------SKYGVHGFP------TLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 59 -----------~~~~I~~~P------Ti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
..|+|.++| +++++ +|+.+.++.|..+.++|.+.|++.+.
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 247899999 88888 78889999999999999999998874
No 171
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.23 E-value=1.4e-11 Score=97.65 Aligned_cols=90 Identities=10% Similarity=0.168 Sum_probs=66.5
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHH---HHHHHHc-CCCCEEEEEc-CCCChhHHHhhCCCccCeEEEE--e-CceeEE
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSF---SVLSSLY-SSIPHFAIEE-SAIRPSILSKYGVHGFPTLFLL--N-SSMRVR 79 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~---e~la~~~-~~~~~v~~~d-~~~~~~l~~~~~I~~~PTi~l~--~-g~~~~~ 79 (250)
...+++++|+||++||..|+.|.... .++++.+ .+.+.+.++. .++...+.++|+|.++||++++ + |+.+..
T Consensus 39 k~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~ 118 (153)
T 2dlx_A 39 QMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVE 118 (153)
T ss_dssp HHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEE
T ss_pred HHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeee
Confidence 45689999999999999999996543 3344333 2344444432 2234578999999999999999 4 567777
Q ss_pred EeCCCCHHHHHHHHHHhhC
Q 025648 80 YHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 80 ~~G~~~~~~l~~fi~~~~~ 98 (250)
+.| .+.+++.++|.+.+.
T Consensus 119 ~~g-~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 119 WHQ-LDVSSFLDQVTGFLG 136 (153)
T ss_dssp ESS-CCHHHHHHHHHHHHH
T ss_pred cCC-CCHHHHHHHHHHHHH
Confidence 655 899999999988764
No 172
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.21 E-value=3e-11 Score=95.72 Aligned_cols=86 Identities=14% Similarity=0.202 Sum_probs=69.1
Q ss_pred CCCeEEEEEEcCCChh-HHhhhHHHHHHHHHcC-----CCCEEEEEcCCCC----------------------------h
Q 025648 10 SHEYVAVLFYASWCPF-SRNFRPSFSVLSSLYS-----SIPHFAIEESAIR----------------------------P 55 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~-C~~~~p~~e~la~~~~-----~~~~v~~~d~~~~----------------------------~ 55 (250)
.+++++|.||++||++ |+...|.++++.+.++ ++.++.+ +.+.. .
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~i-s~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~ 112 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFV-SVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVR 112 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEE-ESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEE-EECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHH
Confidence 5789999999999997 9999999999999987 4444444 33321 3
Q ss_pred hHHHhhCC---------------CccCeEEEE-eCceeEEEeCCC--CHHHHHHHHHHh
Q 025648 56 SILSKYGV---------------HGFPTLFLL-NSSMRVRYHGSR--TLDSLVAFYSDV 96 (250)
Q Consensus 56 ~l~~~~~I---------------~~~PTi~l~-~g~~~~~~~G~~--~~~~l~~fi~~~ 96 (250)
.++++|++ .++|+++++ +|+.+.++.|.. +.++|.+.|+++
T Consensus 113 ~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 113 EAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 56666664 578999999 788888898888 999999998875
No 173
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.20 E-value=1.1e-11 Score=86.93 Aligned_cols=72 Identities=17% Similarity=0.211 Sum_probs=51.8
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCC-CChhHHHhhCCCccCeEEEEeCceeEEEeCC-CCHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA-IRPSILSKYGVHGFPTLFLLNSSMRVRYHGS-RTLDSL 89 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~-~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~-~~~~~l 89 (250)
++.||++||++|+.+.|.++++.+.++....+..++.+ +..+++++|||+++||+++ +|+.+. .|. .+.++|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i-~g~~~~--~G~~~~~~~l 77 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI-DGAAFH--INFGAGIDDL 77 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE-TTEEEE--EEEEEEHHHH
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE-CCEEEE--eccCcCHHHh
Confidence 67899999999999999999988776432222222333 5778999999999999977 776542 443 345554
No 174
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.20 E-value=4.7e-11 Score=111.89 Aligned_cols=83 Identities=16% Similarity=0.246 Sum_probs=72.1
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSL 89 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l 89 (250)
.++..++.||++||++|+.+.|.+++++..+++ +.+..+|.++.++++++|+|.++||+++ +|+.+.. |..+.++|
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~~-v~~~~vd~~~~~~~~~~~~i~svPt~~i-~g~~~~~--G~~~~~~l 191 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNPR-IKHTAIDGGTFQNEITERNVMGVPAVFV-NGKEFGQ--GRMTLTEI 191 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCTT-EEEEEEETTTCHHHHHHTTCCSSSEEEE-TTEEEEE--SCCCHHHH
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcCc-eEEEEEechhhHHHHHHhCCCccCEEEE-CCEEEec--CCCCHHHH
Confidence 456789999999999999999999999999984 5566668889999999999999999977 8877644 99999999
Q ss_pred HHHHHHh
Q 025648 90 VAFYSDV 96 (250)
Q Consensus 90 ~~fi~~~ 96 (250)
.+++.+.
T Consensus 192 ~~~l~~~ 198 (521)
T 1hyu_A 192 VAKVDTG 198 (521)
T ss_dssp HHHHCCS
T ss_pred HHHHhhc
Confidence 9998664
No 175
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.19 E-value=1.2e-10 Score=91.92 Aligned_cols=86 Identities=16% Similarity=0.238 Sum_probs=66.8
Q ss_pred CCCe-EEEEEE-cCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCC---------------------CChhHHHhhCCC
Q 025648 10 SHEY-VAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA---------------------IRPSILSKYGVH 64 (250)
Q Consensus 10 ~~~~-vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~---------------------~~~~l~~~~~I~ 64 (250)
.+++ ++|.|| ++||++|+...|.++++.++|++ +.++.+ ..+ ...++++.|+|.
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v-s~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 105 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGV-SSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAK 105 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEE-ESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEE-eCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCC
Confidence 3555 999999 99999999999999999999865 344444 333 456899999999
Q ss_pred c----cCeEEEE--eCceeEEEeCCC----CHHHHHHHHHHh
Q 025648 65 G----FPTLFLL--NSSMRVRYHGSR----TLDSLVAFYSDV 96 (250)
Q Consensus 65 ~----~PTi~l~--~g~~~~~~~G~~----~~~~l~~fi~~~ 96 (250)
+ +|+++++ +|+.+..+.|.. +.+++.+.|++.
T Consensus 106 ~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 106 GFILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp CSSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHH
T ss_pred CcCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHh
Confidence 9 9999999 788888998832 345555555554
No 176
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.19 E-value=1.8e-11 Score=96.82 Aligned_cols=88 Identities=15% Similarity=0.232 Sum_probs=68.4
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCCC-------C----hhHHH-hh--------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI-------R----PSILS-KY-------------- 61 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~~-------~----~~l~~-~~-------------- 61 (250)
.+++++|.||++||++|+...|.++++.+.|++ +.++.+ +++. . .+.++ ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v-s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAF-PCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNG 109 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE-ECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEE-ECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCC
Confidence 578999999999999999999999999999875 444444 3321 1 22223 32
Q ss_pred ---------------CC--CccC---eEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 62 ---------------GV--HGFP---TLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 62 ---------------~I--~~~P---Ti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
+| .++| +++++ +|+.+.++.|..+.++|.+.|++.+.
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 110 ENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp TTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred CchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 55 6789 88888 78889999999999999999998865
No 177
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.81 E-value=2e-12 Score=101.66 Aligned_cols=87 Identities=16% Similarity=0.233 Sum_probs=62.1
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHH-HHHHcC---CCCEEEEEcCCCCh----------------------hHHHhhC-
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSV-LSSLYS---SIPHFAIEESAIRP----------------------SILSKYG- 62 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~-la~~~~---~~~~v~~~d~~~~~----------------------~l~~~~~- 62 (250)
.+++++|.||++||++|+.+.|.+++ +.+.+. ++.++.+ +.+..+ .+.+.|+
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v-~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 110 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGI-DRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYAL 110 (159)
Confidence 56899999999999999999999998 888776 2333333 222222 2334444
Q ss_pred -CCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 63 -VHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 63 -I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
+.++||++++ +|+.+.++.| .+.+++.+++++...
T Consensus 111 ~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~~ 148 (159)
T 2ls5_A 111 RDAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQINE 148 (159)
Confidence 5779999999 6777777776 566677777766543
No 178
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.18 E-value=9.2e-11 Score=95.32 Aligned_cols=88 Identities=15% Similarity=0.177 Sum_probs=69.3
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCCC-------C----hhHH-H----------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI-------R----PSIL-S---------------- 59 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~~-------~----~~l~-~---------------- 59 (250)
.+++++|.||++||++|+...|.++++.++|++ +.++.+ +++. . .+.+ +
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~v-s~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~ 125 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAF-PCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 125 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEE-ECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEE-EcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCc
Confidence 578999999999999999999999999999875 445554 3321 1 1222 1
Q ss_pred -------------hhCCCccC------eEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 60 -------------KYGVHGFP------TLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 60 -------------~~~I~~~P------Ti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
.|+|.++| +++++ +|+.+.++.|..+.++|.+.|++.+.
T Consensus 126 ~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 126 ENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 24888899 88888 78888999999999999999998874
No 179
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.79 E-value=2.4e-12 Score=98.89 Aligned_cols=73 Identities=23% Similarity=0.532 Sum_probs=54.5
Q ss_pred CCC-eEEEEEEcCCChhHHhhhHHHHHHHHHcC----CCCEEEEEcCCCC-------------------------hhHHH
Q 025648 10 SHE-YVAVLFYASWCPFSRNFRPSFSVLSSLYS----SIPHFAIEESAIR-------------------------PSILS 59 (250)
Q Consensus 10 ~~~-~vlV~Fya~wC~~C~~~~p~~e~la~~~~----~~~~v~~~d~~~~-------------------------~~l~~ 59 (250)
.++ +++|.||++||++|+.+.|.++++++.++ ++..+.+ +.+.. ..+++
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFV-SSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTA 102 (143)
Confidence 456 99999999999999999999999999883 3333333 22211 47899
Q ss_pred hhCCCccCeEEEE--eCceeEEEeCCC
Q 025648 60 KYGVHGFPTLFLL--NSSMRVRYHGSR 84 (250)
Q Consensus 60 ~~~I~~~PTi~l~--~g~~~~~~~G~~ 84 (250)
+|+|.++||++++ +|+.+.+ .|..
T Consensus 103 ~~~v~~~P~~~lid~~G~i~~~-~~~~ 128 (143)
T 2lus_A 103 KYGITGIPALVIVKKDGTLISM-NGRG 128 (143)
Confidence 9999999999999 4554444 4433
No 180
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.16 E-value=3.8e-11 Score=97.43 Aligned_cols=89 Identities=16% Similarity=0.182 Sum_probs=67.7
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCC--------CChhHH---------------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA--------IRPSIL--------------------- 58 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~--------~~~~l~--------------------- 58 (250)
.++++||+||++||++|+...|.++++.++|++ +.++++. ++ ....+.
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is-~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 123 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFP-SNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 123 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEE-BCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEE-CcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCC
Confidence 578999999999999999999999999999875 4555552 11 111111
Q ss_pred ---------------HhhCCCccC---eEEEE--eCceeEEEeCCCCHHHHHHHHHHhhCC
Q 025648 59 ---------------SKYGVHGFP---TLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTGM 99 (250)
Q Consensus 59 ---------------~~~~I~~~P---Ti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~~ 99 (250)
..+++.++| +++++ +|+.+.++.|..+.++|.+.|++.+..
T Consensus 124 ~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 124 ENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLGS 184 (187)
T ss_dssp C-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC--
T ss_pred cchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHhc
Confidence 222455677 88888 788889999999999999999998753
No 181
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.16 E-value=1e-10 Score=92.33 Aligned_cols=88 Identities=11% Similarity=0.101 Sum_probs=66.5
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCCC-------C----hhH-HHhh--------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI-------R----PSI-LSKY-------------- 61 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~~-------~----~~l-~~~~-------------- 61 (250)
.+++++|.||++||++|+...|.++++.+.|++ +.++.+ +++. . .+. .+++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 108 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAF-PCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNG 108 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE-ECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEE-ECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecC
Confidence 578999999999999999999999999999875 444444 2221 1 122 1222
Q ss_pred ---------------C-----CCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 62 ---------------G-----VHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 62 ---------------~-----I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
| |+.+|+++++ +|+.+.++.|..+.++|.+.|++.+.
T Consensus 109 ~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 167 (169)
T 2v1m_A 109 SDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLE 167 (169)
T ss_dssp TTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHH
T ss_pred ccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhc
Confidence 4 4456899888 78889999999899999999988764
No 182
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=99.15 E-value=5.5e-11 Score=83.67 Aligned_cols=75 Identities=19% Similarity=0.297 Sum_probs=57.5
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCC----ChhHHHhhC--CCccCeEEEEeCceeEEEeCCCCHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAI----RPSILSKYG--VHGFPTLFLLNSSMRVRYHGSRTLDS 88 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~----~~~l~~~~~--I~~~PTi~l~~g~~~~~~~G~~~~~~ 88 (250)
++.|+++|||+|+++.+.++++++.++++....+ |.+. ..++.+++| +.++|+++ ++|+.+. | .++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~v-di~~~~~~~~~l~~~~~~~~~~vP~i~-~~g~~i~---~---~~~ 74 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYV-DIRAEGITKEDLQQKAGKPVETVPQIF-VDQQHIG---G---YTD 74 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSSCEEEEE-CHHHHTCCSHHHHHHTCCCSCCSCEEE-ETTEEEE---S---SHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCCceEEEE-ecccChHHHHHHHHHhCCCCceeCeEE-ECCEEEE---C---HHH
Confidence 6789999999999999999999998877544444 3322 357999999 99999983 4776543 2 368
Q ss_pred HHHHHHHhh
Q 025648 89 LVAFYSDVT 97 (250)
Q Consensus 89 l~~fi~~~~ 97 (250)
|.+++++..
T Consensus 75 l~~~~~~~~ 83 (85)
T 1ego_A 75 FAAWVKENL 83 (85)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 888887754
No 183
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.15 E-value=1.7e-11 Score=102.70 Aligned_cols=149 Identities=14% Similarity=0.117 Sum_probs=113.0
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-e-CceeEEEeC---
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-N-SSMRVRYHG--- 82 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~-g~~~~~~~G--- 82 (250)
++.+++++|-||++| |..+.+.|+++|+.++ ...++.. .+++++++|+|++ |++++| . ......|.|
T Consensus 24 l~~~~v~vVgff~~~---~~~~~~~f~~~A~~l~-~~~F~~t---~~~~v~~~~~v~~-p~i~lfk~~~~~~~~~~~~~~ 95 (227)
T 4f9z_D 24 IAATEVAVIGFFQDL---EIPAVPILHSMVQKFP-GVSFGIS---TDSEVLTHYNITG-NTICLFRLVDNEQLNLEDEDI 95 (227)
T ss_dssp HHTSSEEEEEECSCS---CSTHHHHHHHHTTTCT-TSEEEEE---CCHHHHHHTTCCS-SEEEEEETTTTEEEEECHHHH
T ss_pred HhcCCeEEEEEecCC---CchhHHHHHHHHHhCC-CceEEEE---CCHHHHHHcCCCC-CeEEEEEecCccccccccccc
Confidence 456789999999998 5688999999999995 4555553 3688999999998 999999 3 345678884
Q ss_pred -CCCHHHHHHHHHHhhCCCCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHHH------
Q 025648 83 -SRTLDSLVAFYSDVTGMNTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFVL------ 155 (250)
Q Consensus 83 -~~~~~~l~~fi~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~~------ 155 (250)
.++.++|.+||....-+-+.+++.+++.++...........+ .. +||.+|+.+ .+.|..+|..|..
T Consensus 96 g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f---~~--~~~~~~~~~--~~~~~~vAk~~k~~i~F~~ 168 (227)
T 4f9z_D 96 ESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLI---MN--KASPEYEEN--MHRYQKAAKLFQGKILFIL 168 (227)
T ss_dssp HTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEE---EC--TTSTTHHHH--HHHHHHHHHHTTTTCEEEE
T ss_pred CCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEE---Ec--CCcchHHHH--HHHHHHHHHHhhCCEEEEE
Confidence 799999999999998888888888887765432211111111 12 799999999 9999999998742
Q ss_pred ------------HHHHHH--hhhhHHHHhh
Q 025648 156 ------------LRLVYI--FLPTLLIFAQ 171 (250)
Q Consensus 156 ------------~~~~i~--~fPti~~f~~ 171 (250)
..+|+. .+|+|.++..
T Consensus 169 vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~ 198 (227)
T 4f9z_D 169 VDSGMKENGKVISFFKLKESQLPALAIYQT 198 (227)
T ss_dssp EETTSGGGHHHHHHTTCCGGGCSEEEEEES
T ss_pred eCCccHhHHHHHHHcCCCcccCCEEEEEEC
Confidence 456666 6888887753
No 184
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.15 E-value=2.2e-10 Score=89.90 Aligned_cols=86 Identities=12% Similarity=0.190 Sum_probs=67.0
Q ss_pred CCC-eEEEEEE-cCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCC---------------------C--ChhHHHhhC
Q 025648 10 SHE-YVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA---------------------I--RPSILSKYG 62 (250)
Q Consensus 10 ~~~-~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~---------------------~--~~~l~~~~~ 62 (250)
.++ +++|.|| ++||++|+...|.++++.+.+.+ +.++.+. .+ . ...+++.|+
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is-~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 112 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAIS-VGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYG 112 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEE-SCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTT
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEe-CCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcC
Confidence 344 9999998 99999999999999999999864 4444442 22 1 567999999
Q ss_pred CC----ccC--eEEEE--eCceeEEEeCCC----CHHHHHHHHHHh
Q 025648 63 VH----GFP--TLFLL--NSSMRVRYHGSR----TLDSLVAFYSDV 96 (250)
Q Consensus 63 I~----~~P--Ti~l~--~g~~~~~~~G~~----~~~~l~~fi~~~ 96 (250)
|. ++| +++++ +|+.+.++.|.. +.+++.+.|++.
T Consensus 113 v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 113 VFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAAL 158 (160)
T ss_dssp CEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHHT
T ss_pred CccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 99 999 77777 788888888865 456777766653
No 185
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.13 E-value=1.6e-10 Score=94.30 Aligned_cols=88 Identities=13% Similarity=0.242 Sum_probs=72.8
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCC-------------------------CChhHHHhh
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA-------------------------IRPSILSKY 61 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~-------------------------~~~~l~~~~ 61 (250)
.+++++|.|| ++||++|+...|.++++.+.|++ +.++.+. .+ ....+++.|
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs-~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 122 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVS-IDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAA 122 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEE-SSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEE-CCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHh
Confidence 4689999999 99999999999999999999874 4444442 22 245788999
Q ss_pred CCC-----ccCeEEEE--eCceeEEEeCCC----CHHHHHHHHHHhhC
Q 025648 62 GVH-----GFPTLFLL--NSSMRVRYHGSR----TLDSLVAFYSDVTG 98 (250)
Q Consensus 62 ~I~-----~~PTi~l~--~g~~~~~~~G~~----~~~~l~~fi~~~~~ 98 (250)
+|. ++|+++++ +|+.+.++.|.. +.++|.+.|++...
T Consensus 123 ~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 123 GVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp TCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred CCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 999 99999999 788888888764 78999999998875
No 186
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.11 E-value=1e-10 Score=94.29 Aligned_cols=87 Identities=11% Similarity=0.122 Sum_probs=66.6
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCCC-------C----hhHHHh----------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI-------R----PSILSK---------------- 60 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~~-------~----~~l~~~---------------- 60 (250)
.+++++|.||++||++|+...|.++++.++|++ +.++++ +++. . .+.+++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~v-s~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g 126 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAF-PCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTG 126 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE-ECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEE-ECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCC
Confidence 578999999999999999999999999999875 444444 3221 1 122232
Q ss_pred --------hCCCccC-------eEEEE--eCceeEEEeCCCCHHHHHHHHHHhh
Q 025648 61 --------YGVHGFP-------TLFLL--NSSMRVRYHGSRTLDSLVAFYSDVT 97 (250)
Q Consensus 61 --------~~I~~~P-------Ti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~ 97 (250)
|++.++| +++++ +|+.+.++.|..+.++|.+.|++.+
T Consensus 127 ~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 127 TGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred ccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 3355688 77777 7888899999999999999998764
No 187
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.11 E-value=9.5e-11 Score=95.77 Aligned_cols=87 Identities=15% Similarity=0.203 Sum_probs=71.2
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCC----------------------------CChhHH
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA----------------------------IRPSIL 58 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~----------------------------~~~~l~ 58 (250)
.+++++|.|| ++||++|+...|.++++.+.|++ +.++.+. .+ ...+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVS-IDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSIS 110 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEE-SSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEE-CCCHHHHHHHHHhhhhcccccCceeEEEECCchHHH
Confidence 5789999999 99999999999999999998853 4444442 22 245789
Q ss_pred HhhCCC-----ccCeEEEE--eCceeEEEeCCC----CHHHHHHHHHHhh
Q 025648 59 SKYGVH-----GFPTLFLL--NSSMRVRYHGSR----TLDSLVAFYSDVT 97 (250)
Q Consensus 59 ~~~~I~-----~~PTi~l~--~g~~~~~~~G~~----~~~~l~~fi~~~~ 97 (250)
+.|+|. ++|+++++ +|+.+.++.|.. +.++|.+.|++..
T Consensus 111 ~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 111 RDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 999999 99999999 688888888864 6889999998875
No 188
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.11 E-value=1.3e-10 Score=94.09 Aligned_cols=88 Identities=9% Similarity=0.135 Sum_probs=71.8
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcC--CCCEEEEEcCC-------------------------CChhHHHhh
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEESA-------------------------IRPSILSKY 61 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~--~~~~v~~~d~~-------------------------~~~~l~~~~ 61 (250)
.+++++|.|| ++||++|+...|.++++.+.|+ ++.++.+. .+ ...++++.|
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs-~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 108 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVS-TDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQF 108 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEE-SSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEE-CCCHHHHHHHHHHhccccCCCceEEECCchHHHHHh
Confidence 4689999999 9999999999999999999886 34444442 22 245789999
Q ss_pred CCC------ccCeEEEE--eCceeEEEeCCC----CHHHHHHHHHHhhC
Q 025648 62 GVH------GFPTLFLL--NSSMRVRYHGSR----TLDSLVAFYSDVTG 98 (250)
Q Consensus 62 ~I~------~~PTi~l~--~g~~~~~~~G~~----~~~~l~~fi~~~~~ 98 (250)
+|. ++|+++++ +|+.+.++.|.. +.++|.+.|++...
T Consensus 109 ~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 109 DVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred CCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 999 99999999 788888888854 78899999888763
No 189
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=99.10 E-value=3e-10 Score=90.81 Aligned_cols=84 Identities=17% Similarity=0.246 Sum_probs=66.2
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcC-------------------------------------
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES------------------------------------- 51 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~------------------------------------- 51 (250)
...+++++.|+++|||+|+++.|.++++.+.++++. +.....
T Consensus 20 ~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~v~-~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~ 98 (175)
T 3gyk_A 20 PEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNVR-LVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKA 98 (175)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEE-EEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCC
T ss_pred CCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCCEE-EEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCC
Confidence 356789999999999999999999999999987732 222221
Q ss_pred --------------------------------CCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHHHhh
Q 025648 52 --------------------------------AIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVT 97 (250)
Q Consensus 52 --------------------------------~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~~~~ 97 (250)
+.+..++.++||.++||+++ +|+ .+.|..+.+.|.+.|++.+
T Consensus 99 ~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i-~g~---~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 99 NETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV-EDA---LVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE-TTE---EECSCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE-CCE---EeeCCCCHHHHHHHHHHHH
Confidence 12235778899999999987 774 6679999999999998765
No 190
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.10 E-value=1.3e-10 Score=93.58 Aligned_cols=87 Identities=15% Similarity=0.185 Sum_probs=64.6
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCC-----------CChhHHHh-hCCC-----------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA-----------IRPSILSK-YGVH----------- 64 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~-----------~~~~l~~~-~~I~----------- 64 (250)
.+++++|.||++||++|+...|.++++.+.|++ +.++++. ++ +..+.+++ +++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is-~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~ 115 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFP-CNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILG 115 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEE-CCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEE-CCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccC
Confidence 578999999999999999999999999999986 3444442 21 12345555 5532
Q ss_pred ---------------ccCe----EEEE--eCceeEEEeCCCCHHHHHHHHHHhh
Q 025648 65 ---------------GFPT----LFLL--NSSMRVRYHGSRTLDSLVAFYSDVT 97 (250)
Q Consensus 65 ---------------~~PT----i~l~--~g~~~~~~~G~~~~~~l~~fi~~~~ 97 (250)
++|+ .+++ +|+.+.++.|..+.++|.+.|.+.+
T Consensus 116 ~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 169 (180)
T 3kij_A 116 SEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALV 169 (180)
T ss_dssp TTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHH
T ss_pred ccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 2677 7777 7888999999888777777666654
No 191
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=99.07 E-value=1.1e-10 Score=97.25 Aligned_cols=83 Identities=17% Similarity=0.266 Sum_probs=62.3
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEE---------------------------------------c
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIE---------------------------------------E 50 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~---------------------------------------d 50 (250)
.++++++.||++|||+|+++.|.++++.+. ++..+.+. .
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~~ 162 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL--GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPAS 162 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT--TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC--CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChhH
Confidence 567899999999999999999999998763 22111110 1
Q ss_pred C----CCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHHHhh
Q 025648 51 S----AIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVT 97 (250)
Q Consensus 51 ~----~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~~~~ 97 (250)
| +.+.++++++||+++||+++.+|. .+.|..+.++|.++|.+..
T Consensus 163 ~~~~v~~~~~l~~~~gV~gtPt~v~~dG~---~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 163 CDVDIADHYALGVQLGVSGTPAVVLSNGT---LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CSCCHHHHHHHHHHHTCCSSSEEECTTSC---EEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCccCEEEEcCCe---EecCCCCHHHHHHHHHHhh
Confidence 2 123568899999999999443663 5679999999999998754
No 192
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.07 E-value=2.1e-10 Score=95.05 Aligned_cols=88 Identities=10% Similarity=-0.027 Sum_probs=66.5
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCC-----C---Chh---HHH------hhC--------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA-----I---RPS---ILS------KYG-------- 62 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~-----~---~~~---l~~------~~~-------- 62 (250)
.++++||.|||+||++|+...|.++++.++|++ +.++++. ++ + ... .++ +++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~-~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~d 124 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFP-CNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEK 124 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE-CCCSTTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEE-CCcccccCCCCHHHHHHHHHhcccccccccceEEEEE
Confidence 578999999999999999999999999999875 4455552 22 1 111 222 332
Q ss_pred ---------------------------------------------CCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHH
Q 025648 63 ---------------------------------------------VHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSD 95 (250)
Q Consensus 63 ---------------------------------------------I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~ 95 (250)
|...||.+++ +|+.+.++.|..+.++|.+.|++
T Consensus 125 ~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~~ 204 (208)
T 2f8a_A 125 CEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEA 204 (208)
T ss_dssp CCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHH
T ss_pred eecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHHH
Confidence 3445889888 78899999999999999999988
Q ss_pred hhC
Q 025648 96 VTG 98 (250)
Q Consensus 96 ~~~ 98 (250)
.+.
T Consensus 205 ll~ 207 (208)
T 2f8a_A 205 LLS 207 (208)
T ss_dssp HHC
T ss_pred Hhh
Confidence 763
No 193
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.05 E-value=4e-10 Score=90.76 Aligned_cols=86 Identities=16% Similarity=0.089 Sum_probs=63.7
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCCC-------C----hhHHHh----------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI-------R----PSILSK---------------- 60 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~~-------~----~~l~~~---------------- 60 (250)
.+++++|.||++||++|+...|.++++.++|++ +.++.+ +++. . .+.+++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~v-s~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAF-PCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGD 124 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE-ECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEE-ECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCc
Confidence 578999999999999999999999999999875 444444 2210 0 111111
Q ss_pred -----h----------C-----CCccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHh
Q 025648 61 -----Y----------G-----VHGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDV 96 (250)
Q Consensus 61 -----~----------~-----I~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~ 96 (250)
| + |+.+|+++++ +|+.+.++.|..+.++|.+.|+++
T Consensus 125 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 125 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp TSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred chhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 2 4 3446999999 788889999998888888877654
No 194
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.03 E-value=8.9e-10 Score=89.92 Aligned_cols=87 Identities=16% Similarity=0.321 Sum_probs=70.1
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCC----------------------------CChhHH
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA----------------------------IRPSIL 58 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~----------------------------~~~~l~ 58 (250)
.+++++|.|| ++||++|+...|.+++++++|++ +.++++. .+ ...+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is-~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 111 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVS-VDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLS 111 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEE-SSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE-CCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHH
Confidence 4689999999 99999999999999999999854 4444442 22 234789
Q ss_pred HhhCCC------ccCeEEEE--eCceeEEEeCC----CCHHHHHHHHHHhh
Q 025648 59 SKYGVH------GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVT 97 (250)
Q Consensus 59 ~~~~I~------~~PTi~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~ 97 (250)
+.|+|. ++|+++++ +|+.+..+.|. ++.+++.+.|+...
T Consensus 112 ~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 112 EDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 999999 89999999 77888887774 56899999988764
No 195
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.01 E-value=4.7e-10 Score=90.69 Aligned_cols=86 Identities=16% Similarity=0.043 Sum_probs=63.9
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCCC-----------ChhHHHhh---------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESAI-----------RPSILSKY--------------- 61 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~~-----------~~~l~~~~--------------- 61 (250)
.+++++|.||++||++|+...|.++++.++|++ +.++++. ++. ..+.++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is-~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 126 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFP-CNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGD 126 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE-CCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSST
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEE-CcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCCh
Confidence 568999999999999999999999999999875 4445442 211 12222222
Q ss_pred ----------------CC-----CccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHh
Q 025648 62 ----------------GV-----HGFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDV 96 (250)
Q Consensus 62 ----------------~I-----~~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~ 96 (250)
|+ +.+|+++++ +|+.+.++.|..+.++|.+.|++.
T Consensus 127 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 127 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp TBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHH
T ss_pred hhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHh
Confidence 32 235899999 788889999988888888888765
No 196
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.01 E-value=1.1e-09 Score=89.68 Aligned_cols=87 Identities=17% Similarity=0.291 Sum_probs=70.2
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcC--CCCEEEEEcCC----------------------------CChhHH
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEESA----------------------------IRPSIL 58 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~--~~~~v~~~d~~----------------------------~~~~l~ 58 (250)
.+++++|.|| ++||++|+...|.++++.++|+ ++.++++. .+ ...+++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is-~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 113 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACS-MDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIM 113 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEE-SSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe-CCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHH
Confidence 4689999999 9999999999999999999985 34455542 22 245789
Q ss_pred HhhCCC------ccCeEEEE--eCceeEEEeCC----CCHHHHHHHHHHhh
Q 025648 59 SKYGVH------GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVT 97 (250)
Q Consensus 59 ~~~~I~------~~PTi~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~ 97 (250)
+.|+|. ++|+++++ +|+.+..+.|. ++.++|.+.|++..
T Consensus 114 ~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 114 KSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 999999 99999999 67777777664 46799999988765
No 197
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.00 E-value=2.4e-09 Score=84.65 Aligned_cols=88 Identities=11% Similarity=0.069 Sum_probs=68.4
Q ss_pred CCCeEEEEEEcCC-ChhHHhhhHHHHHHHHHcCCCCEEEEEcCC----------------------CChhHHHhhCCCc-
Q 025648 10 SHEYVAVLFYASW-CPFSRNFRPSFSVLSSLYSSIPHFAIEESA----------------------IRPSILSKYGVHG- 65 (250)
Q Consensus 10 ~~~~vlV~Fya~w-C~~C~~~~p~~e~la~~~~~~~~v~~~d~~----------------------~~~~l~~~~~I~~- 65 (250)
.+++++|.||++| |++|+...|.++++.++|+++.++.+.-.+ ...++.+.|+|..
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~ 122 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIK 122 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHHSSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBT
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccc
Confidence 4679999999999 999999999999999998665555553111 2356888999987
Q ss_pred -----cCeEEEE--eCceeEEEeCC-----CCHHHHHHHHHHhh
Q 025648 66 -----FPTLFLL--NSSMRVRYHGS-----RTLDSLVAFYSDVT 97 (250)
Q Consensus 66 -----~PTi~l~--~g~~~~~~~G~-----~~~~~l~~fi~~~~ 97 (250)
.|+++++ +|+.+.++.|. .+.+++.+.|++.+
T Consensus 123 ~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 123 ELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp TTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred cCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 4999999 78888888763 24588888887764
No 198
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.98 E-value=1.5e-09 Score=90.47 Aligned_cols=88 Identities=17% Similarity=0.304 Sum_probs=70.8
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcC--CCCEEEEEcC---------------------------CCChhHHH
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEES---------------------------AIRPSILS 59 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~--~~~~v~~~d~---------------------------~~~~~l~~ 59 (250)
.+++++|.|| ++||++|+...|.++++.++|. ++.++++.-. +...++++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 4689999999 9999999999999999999984 4555554211 12457899
Q ss_pred hhCCC------ccCeEEEE--eCceeEEEeCC----CCHHHHHHHHHHhh
Q 025648 60 KYGVH------GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVT 97 (250)
Q Consensus 60 ~~~I~------~~PTi~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~ 97 (250)
.|+|. ++|+++++ +|+.+..+.|. ++.+++.+.|+...
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 99999 99999999 67777777764 57799999998875
No 199
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.97 E-value=1.3e-09 Score=88.42 Aligned_cols=88 Identities=14% Similarity=0.265 Sum_probs=70.0
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcC--CCCEEEEEcC---------------------------CCChhHHH
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEES---------------------------AIRPSILS 59 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~--~~~~v~~~d~---------------------------~~~~~l~~ 59 (250)
.+++++|.|| ++||++|+...|.++++.++|. ++.++++.-. +...++++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 5789999999 9999999999999999999884 4444544211 11357899
Q ss_pred hhCCC-----ccCeEEEE--eCceeEEEeCC----CCHHHHHHHHHHhh
Q 025648 60 KYGVH-----GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVT 97 (250)
Q Consensus 60 ~~~I~-----~~PTi~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~ 97 (250)
.|||. .+|+++++ +|+.+..+.|. ++.+++.+.|+...
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 99999 89999999 67788888774 45888888888764
No 200
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.96 E-value=2.3e-09 Score=89.04 Aligned_cols=88 Identities=16% Similarity=0.283 Sum_probs=70.1
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcC--CCCEEEEEc---------------------------CCCChhHHH
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEE---------------------------SAIRPSILS 59 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~--~~~~v~~~d---------------------------~~~~~~l~~ 59 (250)
.+++++|.|| ++||++|+...|.+++++++|+ ++.++++.- .|...++++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 5789999999 9999999999999999999884 444444421 112457899
Q ss_pred hhCCC-----ccCeEEEE--eCceeEEEeCC----CCHHHHHHHHHHhh
Q 025648 60 KYGVH-----GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVT 97 (250)
Q Consensus 60 ~~~I~-----~~PTi~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~ 97 (250)
.|||. .+|+++++ +|+.+..+.|. ++.+++.+.|+...
T Consensus 131 ~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 131 DYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99999 89999999 77787777664 45899999988765
No 201
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.95 E-value=3.2e-09 Score=84.08 Aligned_cols=88 Identities=11% Similarity=0.171 Sum_probs=66.6
Q ss_pred CCCeEEEEEEcCCCh-hHHhhhHHHHHHHHHcCC----CCEEEEEcCCC----------------------------Chh
Q 025648 10 SHEYVAVLFYASWCP-FSRNFRPSFSVLSSLYSS----IPHFAIEESAI----------------------------RPS 56 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~-~C~~~~p~~e~la~~~~~----~~~v~~~d~~~----------------------------~~~ 56 (250)
.+++++|.||++||+ +|+...|.+.++.+.+++ +.++.+. .+. ..+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is-~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~ 110 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFS-VDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQS 110 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEE-SCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEE-eCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHH
Confidence 578999999999999 999999999999988753 4455543 221 112
Q ss_pred HHHh----------------hCCCccCeEEEE--eCceeEEEeCCC--CHHHHHHHHHHhhC
Q 025648 57 ILSK----------------YGVHGFPTLFLL--NSSMRVRYHGSR--TLDSLVAFYSDVTG 98 (250)
Q Consensus 57 l~~~----------------~~I~~~PTi~l~--~g~~~~~~~G~~--~~~~l~~fi~~~~~ 98 (250)
+.+. |++...|+++++ +|+.+.++.|.. +.++|.+.|++++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 111 EIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 2222 246778998888 788888899976 58999999998764
No 202
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.95 E-value=8.3e-10 Score=91.60 Aligned_cols=82 Identities=13% Similarity=0.232 Sum_probs=61.7
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEE---------------------------------------c
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIE---------------------------------------E 50 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~---------------------------------------d 50 (250)
+++++++.|+++|||+|+++.|.++++.+. ++....+. .
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~~ 162 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEVK 162 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSCC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChHH
Confidence 567899999999999999999999998763 21111100 0
Q ss_pred CC----CChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHHHh
Q 025648 51 SA----IRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDV 96 (250)
Q Consensus 51 ~~----~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~~~ 96 (250)
|. .+.++++++||+++||+++.+|+ .+.|..+.++|.++|++.
T Consensus 163 ~~~~v~~~~~l~~~~gV~gTPt~vi~nG~---~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 163 TPNIVKKHYELGIQFGVRGTPSIVTSTGE---LIGGYLKPADLLRALEET 209 (211)
T ss_dssp CSSHHHHHHHHHHHHTCCSSCEEECTTSC---CCCSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCCcCCEEEEeCCE---EecCCCCHHHHHHHHHhc
Confidence 11 23567899999999999875665 567889999999999763
No 203
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.92 E-value=1.9e-09 Score=88.30 Aligned_cols=88 Identities=14% Similarity=0.121 Sum_probs=63.8
Q ss_pred CCCeEEEEEEcCCChh-HHhhhHHHHHHHHHcC-----CCCEEEEEcCCC----------------------------Ch
Q 025648 10 SHEYVAVLFYASWCPF-SRNFRPSFSVLSSLYS-----SIPHFAIEESAI----------------------------RP 55 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~-C~~~~p~~e~la~~~~-----~~~~v~~~d~~~----------------------------~~ 55 (250)
.+++++|.||++||++ |+...|.++++.+.+. ++.++.+. .+. ..
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is-~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 118 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFIT-CDPARDSPAVLKEYLSDFHPSILGLTGTFDEVK 118 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE-SCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEE-CCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHH
Confidence 4789999999999997 9999999999877664 44444442 221 13
Q ss_pred hHHHhhCCC-ccC---------------eEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 56 SILSKYGVH-GFP---------------TLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 56 ~l~~~~~I~-~~P---------------Ti~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
.+++.|||. +.| +++++ +|+.+..+.|..+.+.+.+.|.+.+.
T Consensus 119 ~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 119 NACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp HHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHH
T ss_pred HHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 577889987 454 67777 78888888888887777777777653
No 204
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.91 E-value=5.8e-09 Score=87.00 Aligned_cols=86 Identities=22% Similarity=0.354 Sum_probs=68.0
Q ss_pred CCCeEEEEEEc-CCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCC----------------------------CChhHH
Q 025648 10 SHEYVAVLFYA-SWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA----------------------------IRPSIL 58 (250)
Q Consensus 10 ~~~~vlV~Fya-~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~----------------------------~~~~l~ 58 (250)
.+++++|.||+ +||++|+...|.++++.++|++ +.++.+. .+ ....+.
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is-~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 146 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACS-TDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEIS 146 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEE-SSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEE-CCCHHHHHHHHHHhhhhccccccceeEEeCCchHHH
Confidence 57899999996 9999999999999999999854 4444442 22 234688
Q ss_pred HhhCCC------ccCeEEEE--eCceeEEEeCC----CCHHHHHHHHHHh
Q 025648 59 SKYGVH------GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDV 96 (250)
Q Consensus 59 ~~~~I~------~~PTi~l~--~g~~~~~~~G~----~~~~~l~~fi~~~ 96 (250)
+.|+|. .+|+++++ +|+.+..+.|. ...+++++.|+..
T Consensus 147 ~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 147 KAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 999999 89999999 67788887774 3578888887764
No 205
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.90 E-value=4.3e-09 Score=85.41 Aligned_cols=88 Identities=17% Similarity=0.240 Sum_probs=67.9
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCC-------------------------------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA------------------------------------- 52 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~------------------------------------- 52 (250)
.+++++|.|+++|||+|+++.|.++++.+.+++.+.+......
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~lf~~~~~~~~ 103 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHKEHK 103 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECCCSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTSCC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEehhhccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCc
Confidence 4678999999999999999999999999999873333211110
Q ss_pred ------------------------------------CChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHHHh
Q 025648 53 ------------------------------------IRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDV 96 (250)
Q Consensus 53 ------------------------------------~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~~~ 96 (250)
.+..++.++||.|+||+++ ||+......|..+.+.|.+.|+..
T Consensus 104 ~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~v-ng~~~~~~~G~~~~e~l~~~i~~l 182 (192)
T 3h93_A 104 KLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVV-NGKYRFDIGSAGGPEETLKLADYL 182 (192)
T ss_dssp CCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCSSSEEEE-TTTEEEEHHHHTSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCeEEE-CCEEEecccccCCHHHHHHHHHHH
Confidence 0114567789999999987 888777766888999999988876
Q ss_pred hC
Q 025648 97 TG 98 (250)
Q Consensus 97 ~~ 98 (250)
+.
T Consensus 183 ~~ 184 (192)
T 3h93_A 183 IE 184 (192)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 206
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.89 E-value=8e-09 Score=82.68 Aligned_cols=88 Identities=15% Similarity=0.192 Sum_probs=65.4
Q ss_pred CCCeEEEEEEcCC-ChhHHhhhHHHHHHHHHcCCCCEEEEEcC---------------------CCChhHHHhhCCCcc-
Q 025648 10 SHEYVAVLFYASW-CPFSRNFRPSFSVLSSLYSSIPHFAIEES---------------------AIRPSILSKYGVHGF- 66 (250)
Q Consensus 10 ~~~~vlV~Fya~w-C~~C~~~~p~~e~la~~~~~~~~v~~~d~---------------------~~~~~l~~~~~I~~~- 66 (250)
.+++++|.||++| |++|+...|.++++.++ +++.++.+.-. +....+.+.|+|...
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~ 121 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIAD 121 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBCS
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccc
Confidence 4689999999999 99999999999999988 76655555311 113578899999887
Q ss_pred --------CeEEEE--eCceeEEEeC--C---CCHHHHHHHHHHhhC
Q 025648 67 --------PTLFLL--NSSMRVRYHG--S---RTLDSLVAFYSDVTG 98 (250)
Q Consensus 67 --------PTi~l~--~g~~~~~~~G--~---~~~~~l~~fi~~~~~ 98 (250)
|+++++ +|+.+..+.| . .+.+++++.+.+..|
T Consensus 122 ~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~~~~ 168 (175)
T 1xvq_A 122 GPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGATSG 168 (175)
T ss_dssp STTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHHTC-
T ss_pred cccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHhhcC
Confidence 899888 7888888863 2 245666666655444
No 207
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.84 E-value=1.8e-08 Score=84.80 Aligned_cols=85 Identities=11% Similarity=0.271 Sum_probs=63.0
Q ss_pred CCCeEEEEEE-cCCChhHH-hhhHHHHHHHHHcC--CC-CEEEEEcC---------------------CCChhHHHhhCC
Q 025648 10 SHEYVAVLFY-ASWCPFSR-NFRPSFSVLSSLYS--SI-PHFAIEES---------------------AIRPSILSKYGV 63 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~-~~~p~~e~la~~~~--~~-~~v~~~d~---------------------~~~~~l~~~~~I 63 (250)
.+++++|.|| ++||++|. ...|.++++.++|. ++ ..+++... |...++++.||+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 111 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGM 111 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCc
Confidence 5789999999 99999999 99999999998875 45 55655311 122467888888
Q ss_pred C-----------ccCeEEEE-eCceeEEEeCC---------CCHHHHHHHHH
Q 025648 64 H-----------GFPTLFLL-NSSMRVRYHGS---------RTLDSLVAFYS 94 (250)
Q Consensus 64 ~-----------~~PTi~l~-~g~~~~~~~G~---------~~~~~l~~fi~ 94 (250)
. ..|+.+++ +|+....+.|. .+.+++.+.+.
T Consensus 112 ~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~ 163 (241)
T 1nm3_A 112 LVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYLA 163 (241)
T ss_dssp EEECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHHHHC
T ss_pred eeecccccCcccceeEEEEEECCEEEEEEEeccCCCccceecCHHHHHHHhh
Confidence 6 35888888 78888777774 35666666654
No 208
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.83 E-value=3e-09 Score=74.03 Aligned_cols=71 Identities=8% Similarity=0.111 Sum_probs=50.1
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHH---hhCCCccCeEEEEeCceeEEEeCCCCHHHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILS---KYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVA 91 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~---~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~ 91 (250)
++.|+++||++|+++.+.+++. ++. +...|.+.++++.+ ++|+.++||++ .+|+. .++.+.++|.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-----~i~-~~~vdi~~~~~~~~~~~~~g~~~vP~~~-~~g~~----~~g~~~~~l~~ 71 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-----GFD-FEMINVDRVPEAAEALRAQGFRQLPVVI-AGDLS----WSGFRPDMINR 71 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCC-CEEEETTTCHHHHHHHHHTTCCSSCEEE-ETTEE----EESCCHHHHGG
T ss_pred EEEEcCCCChhHHHHHHHHHHC-----CCC-eEEEECCCCHHHHHHHHHhCCCccCEEE-ECCEE----EecCCHHHHHH
Confidence 6789999999999999999874 332 33446666655543 58999999993 36653 34567777777
Q ss_pred HHHHh
Q 025648 92 FYSDV 96 (250)
Q Consensus 92 fi~~~ 96 (250)
++.++
T Consensus 72 ~l~~~ 76 (81)
T 1h75_A 72 LHPAP 76 (81)
T ss_dssp GSCCC
T ss_pred HHhcc
Confidence 66543
No 209
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.83 E-value=3.6e-10 Score=84.65 Aligned_cols=64 Identities=17% Similarity=0.202 Sum_probs=46.4
Q ss_pred CCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCC-------hhHHHhhCCCccCeEEEEeCceeE
Q 025648 11 HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIR-------PSILSKYGVHGFPTLFLLNSSMRV 78 (250)
Q Consensus 11 ~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~-------~~l~~~~~I~~~PTi~l~~g~~~~ 78 (250)
....++.|+++|||+|+++.+.++++...++. +..+|.+.+ ..+.+.+|+.++|++++ +|+.+.
T Consensus 17 ~~~~vv~f~~~~Cp~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i-~g~~ig 87 (114)
T 2hze_A 17 ANNKVTIFVKYTCPFCRNALDILNKFSFKRGA---YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF-GKTSIG 87 (114)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHHTTSCBCTTS---EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE-TTEEEE
T ss_pred ccCCEEEEEeCCChhHHHHHHHHHHcCCCcCc---eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE-CCEEEe
Confidence 34467889999999999999999876543221 444455544 37889999999999744 776543
No 210
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.82 E-value=9.7e-10 Score=80.52 Aligned_cols=61 Identities=18% Similarity=0.266 Sum_probs=45.6
Q ss_pred EEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCC-------hhHHHhhCCCccCeEEEEeCceeE
Q 025648 14 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIR-------PSILSKYGVHGFPTLFLLNSSMRV 78 (250)
Q Consensus 14 vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~-------~~l~~~~~I~~~PTi~l~~g~~~~ 78 (250)
.++.|+++|||+|+++.+.++++...+++ +...+.+.+ ..+.+.+|+.++|+++ ++|+.+.
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~-~~g~~i~ 80 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEGL---LEFVDITATSDTNEIQDYLQQLTGARTVPRVF-IGKECIG 80 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTTS---EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEE-ETTEEEE
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCCc---cEEEEccCCCCHHHHHHHHHHHhCCCCcCeEE-ECCEEEe
Confidence 36779999999999999999988766554 333444443 3578899999999983 3776544
No 211
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.81 E-value=8.2e-09 Score=83.91 Aligned_cols=34 Identities=15% Similarity=0.267 Sum_probs=31.4
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS 42 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~ 42 (250)
..+++++|.||++|||+|+++.|.++++.+.+++
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~ 56 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ 56 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC
Confidence 3568899999999999999999999999999986
No 212
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.81 E-value=1.6e-08 Score=79.34 Aligned_cols=87 Identities=14% Similarity=0.224 Sum_probs=65.7
Q ss_pred CCCeEEEEEEc-CCChhHHhhhHHHHHHHHHcCC--CCEEEEEc--------------------CCCChhHHHhhCCCc-
Q 025648 10 SHEYVAVLFYA-SWCPFSRNFRPSFSVLSSLYSS--IPHFAIEE--------------------SAIRPSILSKYGVHG- 65 (250)
Q Consensus 10 ~~~~vlV~Fya-~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d--------------------~~~~~~l~~~~~I~~- 65 (250)
.+++++|.||+ +||++|+...|.++++.++|++ +..+++.- .+...++++.||+..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 46799999998 9999999999999999998863 44554421 113347888999987
Q ss_pred -----------cCeEEEE--eCceeEEEeCCC---CHHHHHHHHHHh
Q 025648 66 -----------FPTLFLL--NSSMRVRYHGSR---TLDSLVAFYSDV 96 (250)
Q Consensus 66 -----------~PTi~l~--~g~~~~~~~G~~---~~~~l~~fi~~~ 96 (250)
+|+++++ +|+.+..+.+.. ..+++.+.|++.
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 9999999 677777776533 356777777654
No 213
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.79 E-value=2.3e-08 Score=68.17 Aligned_cols=69 Identities=6% Similarity=0.122 Sum_probs=51.0
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHH---hhCCCccCeEEEEeCceeEEEeCCCCHHHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILS---KYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVA 91 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~---~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~ 91 (250)
++.|+++||++|+++.+.++++ ++. +...|.+.++++.+ ++++.++|++++ +|+. .++.+.++|.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~i~-~~~~di~~~~~~~~~~~~~~~~~vP~l~~-~g~~----~~g~~~~~l~~ 71 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-----GLA-YNTVDISLDDEARDYVMALGYVQAPVVEV-DGEH----WSGFRPERIKQ 71 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCC-CEEEETTTCHHHHHHHHHTTCBCCCEEEE-TTEE----EESCCHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----CCC-cEEEECCCCHHHHHHHHHcCCCccCEEEE-CCeE----EcCCCHHHHHH
Confidence 6789999999999999999875 332 33446666666555 899999999984 6643 34567888888
Q ss_pred HHH
Q 025648 92 FYS 94 (250)
Q Consensus 92 fi~ 94 (250)
+++
T Consensus 72 ~l~ 74 (75)
T 1r7h_A 72 LQA 74 (75)
T ss_dssp HHC
T ss_pred HHh
Confidence 763
No 214
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.79 E-value=1.3e-08 Score=84.67 Aligned_cols=87 Identities=11% Similarity=0.072 Sum_probs=65.8
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCC--------C---ChhHHH------hhCCC------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA--------I---RPSILS------KYGVH------ 64 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~--------~---~~~l~~------~~~I~------ 64 (250)
.++++||.|||+||++|+ ..|.++++.++|.+ +.++++. ++ . ..+.++ +|++.
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs-~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fpll~d 132 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFP-CNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEK 132 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEE-CCCSTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBCC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEE-ccccCcCCCCCHHHHHHHHHhccchhccCccceeEee
Confidence 578999999999999999 89999999999864 5555553 21 1 123444 45431
Q ss_pred -------------------------------------------ccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 65 -------------------------------------------GFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 65 -------------------------------------------~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
..||.+++ +|+.+.+|.|..+.++|.+.|++.+.
T Consensus 133 ~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~~~g~~~~~~l~~~I~~ll~ 211 (215)
T 2i3y_A 133 GDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLK 211 (215)
T ss_dssp CCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHGG
T ss_pred eccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 11688888 78889999999999999999998874
No 215
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.78 E-value=1.2e-08 Score=86.22 Aligned_cols=87 Identities=9% Similarity=0.217 Sum_probs=62.6
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEE----------------------------------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIE---------------------------------------- 49 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~---------------------------------------- 49 (250)
+.+.+++.|+.+|||+|+++.|.++++.+. .++.+..+.
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~-g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~ 174 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS-GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVP 174 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT-TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC-CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCcc
Confidence 456789999999999999999999987765 222211110
Q ss_pred ---------cCCCChhHHHhhCCCccCeEEEEeC-ceeEEEeCCCCHHHHHHHHHHhh
Q 025648 50 ---------ESAIRPSILSKYGVHGFPTLFLLNS-SMRVRYHGSRTLDSLVAFYSDVT 97 (250)
Q Consensus 50 ---------d~~~~~~l~~~~~I~~~PTi~l~~g-~~~~~~~G~~~~~~l~~fi~~~~ 97 (250)
..+.+..+++++||+++||+++.++ +......|..+.++|.++|++..
T Consensus 175 ~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 175 ANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEEEEEESSCCHHHHHHHTTC--
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCEEEecCCCCHHHHHHHHHHHH
Confidence 0012245778999999999999852 34467889999999999887754
No 216
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.77 E-value=6.7e-08 Score=75.72 Aligned_cols=74 Identities=14% Similarity=0.212 Sum_probs=55.7
Q ss_pred eEEEEEE-cCCChhHHhhhHHHHHHHHHcCCC-CEEEEE-c-------------------CCCChhHHHhhCCCccC---
Q 025648 13 YVAVLFY-ASWCPFSRNFRPSFSVLSSLYSSI-PHFAIE-E-------------------SAIRPSILSKYGVHGFP--- 67 (250)
Q Consensus 13 ~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~~-~~v~~~-d-------------------~~~~~~l~~~~~I~~~P--- 67 (250)
+++|.|| ++||++|....|.++++.++|++. .++++. | .|...++++.||+...|
T Consensus 37 ~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~~g 116 (159)
T 2a4v_A 37 VVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPLSG 116 (159)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSSSSC
T ss_pred eEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccccCC
Confidence 7888987 999999999999999999988742 333331 1 12345788999999998
Q ss_pred ---eEEEE-eCceeEEEeCCCCH
Q 025648 68 ---TLFLL-NSSMRVRYHGSRTL 86 (250)
Q Consensus 68 ---Ti~l~-~g~~~~~~~G~~~~ 86 (250)
+.+++ +|+.+..+.|....
T Consensus 117 ~~~~~~li~~G~i~~~~~g~~~~ 139 (159)
T 2a4v_A 117 SIRSHFIFVDGKLKFKRVKISPE 139 (159)
T ss_dssp BCCEEEEEETTEEEEEEESCCHH
T ss_pred ccceEEEEcCCEEEEEEccCCcc
Confidence 66666 67777888886544
No 217
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.73 E-value=3e-08 Score=82.84 Aligned_cols=88 Identities=18% Similarity=0.338 Sum_probs=67.7
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcC--CCCEEEEEc---------------------------CCCChhHHH
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIPHFAIEE---------------------------SAIRPSILS 59 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~--~~~~v~~~d---------------------------~~~~~~l~~ 59 (250)
.++++||.|| ++||++|+...|.++++.++|+ ++.++++.. .|....+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 5789999999 9999999999999999998884 444444421 012346788
Q ss_pred hhCC-----CccCeEEEE--eCceeEEEeCC----CCHHHHHHHHHHhh
Q 025648 60 KYGV-----HGFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVT 97 (250)
Q Consensus 60 ~~~I-----~~~PTi~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~ 97 (250)
.||| ..+|+++++ +|+.+..+.|. .+.+++.+.|++..
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 8999 478999999 67777777663 57889999888764
No 218
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.73 E-value=5.7e-08 Score=76.61 Aligned_cols=86 Identities=9% Similarity=0.047 Sum_probs=63.9
Q ss_pred CCCeEEEEEEc-CCChhHHhhhHHHHHHHHHcCCCCEEEEE---------------------cCC-CChhHHHhhCCC--
Q 025648 10 SHEYVAVLFYA-SWCPFSRNFRPSFSVLSSLYSSIPHFAIE---------------------ESA-IRPSILSKYGVH-- 64 (250)
Q Consensus 10 ~~~~vlV~Fya-~wC~~C~~~~p~~e~la~~~~~~~~v~~~---------------------d~~-~~~~l~~~~~I~-- 64 (250)
.+++++|.||+ .||++|....|.++++.++|+++..+++. -.+ ....+++.||+.
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~ 120 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGLDNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYALLIN 120 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTCTTEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTCBCT
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHcCCcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhCCccc
Confidence 56799999995 99999999999999999888544444431 012 345688889987
Q ss_pred --cc--CeEEEE--eCceeEEEeCC-----CCHHHHHHHHHH
Q 025648 65 --GF--PTLFLL--NSSMRVRYHGS-----RTLDSLVAFYSD 95 (250)
Q Consensus 65 --~~--PTi~l~--~g~~~~~~~G~-----~~~~~l~~fi~~ 95 (250)
++ |+++++ +|+.+..+.|. .+.+++.+.|++
T Consensus 121 ~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 121 EWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp TTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred cCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 43 999999 78888888763 345788887764
No 219
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.71 E-value=4.7e-08 Score=80.89 Aligned_cols=88 Identities=17% Similarity=0.276 Sum_probs=67.6
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcC--CCCEEEEE-c--------------------------CCCChhHHH
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIPHFAIE-E--------------------------SAIRPSILS 59 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~--~~~~v~~~-d--------------------------~~~~~~l~~ 59 (250)
.+++++|.|| ++||++|....|.++++.++|+ ++.++++. | .+....+++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 4689999999 9999999999999999999884 34444442 0 012246788
Q ss_pred hhCCC------ccCeEEEE--eCceeEEEeCC----CCHHHHHHHHHHhh
Q 025648 60 KYGVH------GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVT 97 (250)
Q Consensus 60 ~~~I~------~~PTi~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~ 97 (250)
.|||. .+|+++++ +|+.+..+.|. ++.+++++.|+...
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 89985 69999999 67777777663 57889999888764
No 220
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.71 E-value=2e-10 Score=87.06 Aligned_cols=88 Identities=14% Similarity=0.170 Sum_probs=65.4
Q ss_pred CCCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH---------------------HHHH
Q 025648 99 MNTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------------VLLR 157 (250)
Q Consensus 99 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------------~~~~ 157 (250)
..+..+++++|+..+......+++ .+|+ |||++|+.+ .|.|..+|..| ++.+
T Consensus 15 ~~v~~l~~~~f~~~~~~~~~~vlv---~F~a--~wC~~C~~~--~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~ 87 (127)
T 3h79_A 15 SRVVELTDETFDSIVMDPEKDVFV---LYYV--PWSRHSVAA--MRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIER 87 (127)
T ss_dssp CCCEECCTTTHHHHHTCTTCEEEE---EEEC--TTCHHHHHH--HHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHH
T ss_pred CceEECChhhHHHHHhCCCCCEEE---EEEC--CccHHHHHH--hHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHh
Confidence 445677888998877543333444 3467 999999999 99999999865 2489
Q ss_pred HHHHhhhhHHHHhhhHHHHHHHhhccccccc-chHHHHh-hHH-HHHHHhccc
Q 025648 158 LVYIFLPTLLIFAQFTWRRLIRNLKLGSLLE-HPRTYLN-RAI-QLFKTLNEP 207 (250)
Q Consensus 158 ~~i~~fPti~~f~~~~~~~~~~~~~~~~~~~-~~~~y~g-r~~-~~~~~l~~~ 207 (250)
|+|.+|||+++|.+|. + .+..|.| |.. .|.+||+++
T Consensus 88 ~~v~~~Pt~~~~~~g~--------------~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 88 MRVSGFPTMRYYTRID--------------KQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp TTCCSSSEEEEECSSC--------------SSSCEECCSCCCHHHHHHHHHHH
T ss_pred cCCccCCEEEEEeCCC--------------CCCceEecCCccHHHHHHHHHhc
Confidence 9999999999998876 2 2356777 554 888888743
No 221
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.71 E-value=5.1e-08 Score=77.41 Aligned_cols=86 Identities=12% Similarity=0.114 Sum_probs=63.6
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcCCCCEEEEEc---------------------CC-CChhHHHhhCCCc-
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSSIPHFAIEE---------------------SA-IRPSILSKYGVHG- 65 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~~~~v~~~d---------------------~~-~~~~l~~~~~I~~- 65 (250)
.+++++|.|| ++||++|....|.++++.++++++..+++.. .+ ...++ +.||+..
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~~ 124 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGMEGVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDM-EKYGVLIG 124 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTCTTEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGG-GGGTCBBC
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHcCCceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcH-HHhCCEec
Confidence 4679999999 8999999999999999988875444444310 12 23456 8888862
Q ss_pred --------cCeEEEE--eCceeEEEeC-----CCCHHHHHHHHHHh
Q 025648 66 --------FPTLFLL--NSSMRVRYHG-----SRTLDSLVAFYSDV 96 (250)
Q Consensus 66 --------~PTi~l~--~g~~~~~~~G-----~~~~~~l~~fi~~~ 96 (250)
.|+++++ +|+.+..+.| ..+.+++.+.|++.
T Consensus 125 ~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 125 EGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp SSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred ccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 6999999 6778888864 34578888888764
No 222
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.70 E-value=5.3e-08 Score=78.76 Aligned_cols=89 Identities=6% Similarity=0.071 Sum_probs=67.0
Q ss_pred CCCeEEEEEEc-CCChhHHhhhHHHHHHHHHcC--CCCEEEEE-c-----------------------CCCChhHHHhhC
Q 025648 10 SHEYVAVLFYA-SWCPFSRNFRPSFSVLSSLYS--SIPHFAIE-E-----------------------SAIRPSILSKYG 62 (250)
Q Consensus 10 ~~~~vlV~Fya-~wC~~C~~~~p~~e~la~~~~--~~~~v~~~-d-----------------------~~~~~~l~~~~~ 62 (250)
.+++++|.||+ +||++|....|.++++.++|+ ++.++++. | .+....+++.||
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 46899999995 999999999999999998875 34444442 0 012346778888
Q ss_pred CC------ccCeEEEE--eCceeEEEeCCC----CHHHHHHHHHHhhC
Q 025648 63 VH------GFPTLFLL--NSSMRVRYHGSR----TLDSLVAFYSDVTG 98 (250)
Q Consensus 63 I~------~~PTi~l~--~g~~~~~~~G~~----~~~~l~~fi~~~~~ 98 (250)
+. ..|+++++ +|+.+..+.|.. +.+++.+.|++...
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~~ 156 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQY 156 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 87 37999999 688888887753 68899998887653
No 223
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.70 E-value=3.7e-08 Score=87.35 Aligned_cols=131 Identities=9% Similarity=-0.001 Sum_probs=101.0
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-e-CceeEEEeCC-CCH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-N-SSMRVRYHGS-RTL 86 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~-g~~~~~~~G~-~~~ 86 (250)
.++.++|.||++||. ...+.|.++++.+.+...++... +++++++|+|. +|++++| . ++....|.|. ++.
T Consensus 141 ~~~~~vv~ff~~~~~---~~~~~~~~~A~~~~~~~~f~~~~---~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~ 213 (350)
T 1sji_A 141 EDQIKLIGFFKSEES---EYYKAFEEAAEHFQPYIKFFATF---DKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTE 213 (350)
T ss_dssp CSSCEEEEECSCTTS---HHHHHHHHHHHHTTTTSEEEEEC---CHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCH
T ss_pred CCCcEEEEEECCCCc---HHHHHHHHHHHhhccCcEEEEEC---CHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCH
Confidence 456789999999865 44689999999997766676653 47899999999 9999999 3 4566789997 899
Q ss_pred HHHHHHHHHhhCCCCCCCCCCCccccCCCCC-cccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH
Q 025648 87 DSLVAFYSDVTGMNTASLDKISPDKVGKASN-HEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV 154 (250)
Q Consensus 87 ~~l~~fi~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~ 154 (250)
++|.+||....-+.+.+++.+++..+..... ...... ... +||.+|..+ .+.+..+|..|.
T Consensus 214 ~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~~~~~~l~---f~~--~~~~~~~~~--~~~~~~vA~~~~ 275 (350)
T 1sji_A 214 EELVEFVKEHQRPTLRRLRPEDMFETWEDDLNGIHIVA---FAE--RSDPDGYEF--LEILKQVARDNT 275 (350)
T ss_dssp HHHHHHHHHHCCCSEEECCTTTHHHHHHSCSSSEEEEE---ECC--TTSHHHHHH--HHHHHHHHHHGG
T ss_pred HHHHHHHHHcCccchhhcChhhHHHHhcCCCCCcEEEE---EEc--CCCccHHHH--HHHHHHHHHHhC
Confidence 9999999999888888899988877643211 111111 122 677778888 899999999875
No 224
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.70 E-value=3.2e-08 Score=81.83 Aligned_cols=87 Identities=13% Similarity=0.083 Sum_probs=64.6
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEcCC-----------CChhHHH------hhCCC------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEESA-----------IRPSILS------KYGVH------ 64 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d~~-----------~~~~l~~------~~~I~------ 64 (250)
.++++||.|||+||++| ...|.++++.++|.+ +.++++. ++ +..+.++ +|++.
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs-~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fp~l~d 114 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFP-CNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEK 114 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEE-CCCBTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBCC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEE-CcccCcCCCCCHHHHHHHHHhcchhhccCccceeeeE
Confidence 57899999999999999 688999999999864 5555553 11 1123344 44431
Q ss_pred -------------------------------------------ccCeEEEE--eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 65 -------------------------------------------GFPTLFLL--NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 65 -------------------------------------------~~PTi~l~--~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
..||.+++ +|+.+.+|.|..+.++|.+.|++.+.
T Consensus 115 ~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~~~g~~~~~~l~~~I~~ll~ 193 (207)
T 2r37_A 115 GDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMR 193 (207)
T ss_dssp CCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred eccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 11688888 78888999999999999999888763
No 225
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.69 E-value=1.4e-07 Score=75.22 Aligned_cols=89 Identities=18% Similarity=0.359 Sum_probs=69.1
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCC------------------------------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAI------------------------------------ 53 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~------------------------------------ 53 (250)
.+++++|.|+.-.||+|+++.|.+.++.+.+++...+......-
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~~~~ 99 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVPVMFNRIHTL 99 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEECSSSSGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEecCCCCCchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999988744443311000
Q ss_pred ---------------------------------------ChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHH
Q 025648 54 ---------------------------------------RPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYS 94 (250)
Q Consensus 54 ---------------------------------------~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~ 94 (250)
...+++++||+|+||+++ ||+.+....+..+.+++.+.|+
T Consensus 100 ~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gTPtfiI-NGky~v~~~~~~s~e~~~~~i~ 178 (184)
T 4dvc_A 100 RKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDSGLTGVPAVVV-NNRYLVQGQSAKSLDEYFDLVN 178 (184)
T ss_dssp CCCCSSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHTCCSSSEEEE-TTTEEECGGGCSSHHHHHHHHH
T ss_pred hhccchHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEEEE-CCEEeeCCcCCCCHHHHHHHHH
Confidence 015678899999999877 9987666667789999999998
Q ss_pred HhhCC
Q 025648 95 DVTGM 99 (250)
Q Consensus 95 ~~~~~ 99 (250)
.++..
T Consensus 179 ~Ll~k 183 (184)
T 4dvc_A 179 YLLTL 183 (184)
T ss_dssp HHTTC
T ss_pred HHHhC
Confidence 77643
No 226
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.68 E-value=1.1e-08 Score=80.66 Aligned_cols=87 Identities=15% Similarity=0.276 Sum_probs=57.5
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcCC--CCEEEEEc--------------------CCCChhHHHhhCCC--
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEE--------------------SAIRPSILSKYGVH-- 64 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d--------------------~~~~~~l~~~~~I~-- 64 (250)
.+++++|.|| ++||++|....|.++++.+++.+ +..+++.. .|.+.+++++|||.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~ 108 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWE 108 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCccc
Confidence 5688999999 99999999999999999888764 44444421 12334678888874
Q ss_pred ---------ccCeEEEE--eCceeEEEeC-----CCCHHHHHHHHHHh
Q 025648 65 ---------GFPTLFLL--NSSMRVRYHG-----SRTLDSLVAFYSDV 96 (250)
Q Consensus 65 ---------~~PTi~l~--~g~~~~~~~G-----~~~~~~l~~fi~~~ 96 (250)
..|+++++ +|+.+..+.| ..+.+++.+.|+.+
T Consensus 109 ~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 109 FPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp CTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred cccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 46788888 6776666543 34678898888754
No 227
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.67 E-value=6.7e-08 Score=76.99 Aligned_cols=91 Identities=8% Similarity=-0.022 Sum_probs=67.8
Q ss_pred CCCeEEEEEEcCCCh-hHHhhhHHHHHHHHHcC----CCCEEEEE-cC-----------------------------CCC
Q 025648 10 SHEYVAVLFYASWCP-FSRNFRPSFSVLSSLYS----SIPHFAIE-ES-----------------------------AIR 54 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~-~C~~~~p~~e~la~~~~----~~~~v~~~-d~-----------------------------~~~ 54 (250)
.+++++|.||++||+ .|....|.++++.+.+. ++..+.+. |. +..
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 478999999999997 69999999999999984 24444432 10 011
Q ss_pred hhHHHhhCC---------CccCeEEEE--eCceeEEEeCC-CCHHHHHHHHHHhhCCC
Q 025648 55 PSILSKYGV---------HGFPTLFLL--NSSMRVRYHGS-RTLDSLVAFYSDVTGMN 100 (250)
Q Consensus 55 ~~l~~~~~I---------~~~PTi~l~--~g~~~~~~~G~-~~~~~l~~fi~~~~~~~ 100 (250)
.++++.||+ ...|+++++ +|+.+..|.|. .+.++|.+.|.+....+
T Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~~ 164 (170)
T 3me7_A 107 FKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGEG 164 (170)
T ss_dssp HHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTCS
T ss_pred HHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhccc
Confidence 246666564 456888899 77787788885 68999999999988654
No 228
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.63 E-value=5.4e-10 Score=90.48 Aligned_cols=79 Identities=9% Similarity=0.024 Sum_probs=57.7
Q ss_pred HHHHHhhCCCCCCCCCCCccccCCCC-CcccccCCCC----CCCCCcCCCChhhhcCchHHHHHHHHHH-----H-----
Q 025648 91 AFYSDVTGMNTASLDKISPDKVGKAS-NHEKHNNTEE----ESCPFSWARSPENLLQQETYLALATAFV-----L----- 155 (250)
Q Consensus 91 ~fi~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~----~~~~~pw~~~ck~~~~~~~~~~lA~~f~-----~----- 155 (250)
+++.......+..+++++|++++... ...++++|.. .+. +|||+|+.+ .|.|+.+|..|. .
T Consensus 10 ~l~~l~~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~--~wCgpCk~l--~P~~e~lA~~~~~~~~~~~v~f~ 85 (178)
T 3ga4_A 10 DILQLKDDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNG--MSCQLCHDF--EKTYHAVADVIRSQAPQSLNLFF 85 (178)
T ss_dssp HHHTTCCTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTS--CBCHHHHHH--HHHHHHHHHHHHHHCTTCCEEEE
T ss_pred HHHHhhccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCC--CCChhHHHH--HHHHHHHHHHhhhccCCCCEEEE
Confidence 33333334456678999999887532 2224444433 223 699999999 999999999875 2
Q ss_pred -----------HHHHHHhhhhHHHHhhhH
Q 025648 156 -----------LRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 156 -----------~~~~i~~fPti~~f~~~~ 173 (250)
.+|+|++.|||++|+.|.
T Consensus 86 kvD~d~~~~la~~~~I~siPtl~~F~~g~ 114 (178)
T 3ga4_A 86 TVDVNEVPQLVKDLKLQNVPHLVVYPPAE 114 (178)
T ss_dssp EEETTTCHHHHHHTTCCSSCEEEEECCCC
T ss_pred EEECccCHHHHHHcCCCCCCEEEEEcCCC
Confidence 899999999999999886
No 229
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.63 E-value=7.9e-08 Score=76.02 Aligned_cols=85 Identities=15% Similarity=0.078 Sum_probs=63.3
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcCCCCEEEEEc---------------------CCC-ChhHHHhhCCCc-
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSSIPHFAIEE---------------------SAI-RPSILSKYGVHG- 65 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~~~~v~~~d---------------------~~~-~~~l~~~~~I~~- 65 (250)
.+++++|.|| +.||++|....|.++++.++ .++..+++.. .|. ..++++.||+..
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~ 123 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-EEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVME 123 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEET
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-CCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCccc
Confidence 4678999999 88999999999999999877 6655555420 122 347788888885
Q ss_pred -----cCeEEEE--eCceeEEEeC-----CCCHHHHHHHHHH
Q 025648 66 -----FPTLFLL--NSSMRVRYHG-----SRTLDSLVAFYSD 95 (250)
Q Consensus 66 -----~PTi~l~--~g~~~~~~~G-----~~~~~~l~~fi~~ 95 (250)
.|+++++ +|+.+..+.+ ..+.+++.+.|++
T Consensus 124 ~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 124 ELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp TTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred cCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 8999999 6777776543 3466888877764
No 230
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.63 E-value=1e-07 Score=76.56 Aligned_cols=88 Identities=11% Similarity=0.205 Sum_probs=64.2
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcCC--CCEEEEEc--------------------CCCChhHHHhhCCCc-
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEE--------------------SAIRPSILSKYGVHG- 65 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d--------------------~~~~~~l~~~~~I~~- 65 (250)
.+++++|.|| +.||++|....|.++++.++|++ +.++++.. .+...++++.|++..
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~ 129 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKE 129 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCccc
Confidence 4678899998 99999999999999999999864 33444311 122347888898864
Q ss_pred -----------cCeEEEE--eCceeEEEeCC---CCHHHHHHHHHHhh
Q 025648 66 -----------FPTLFLL--NSSMRVRYHGS---RTLDSLVAFYSDVT 97 (250)
Q Consensus 66 -----------~PTi~l~--~g~~~~~~~G~---~~~~~l~~fi~~~~ 97 (250)
.|+++++ +|+.+..+.+. .+.+++.+.|++..
T Consensus 130 ~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l~ 177 (179)
T 3ixr_A 130 KTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAHA 177 (179)
T ss_dssp ECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHHH
T ss_pred ccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHHh
Confidence 6889999 67777777553 34577777776653
No 231
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.61 E-value=3.1e-07 Score=74.81 Aligned_cols=33 Identities=15% Similarity=0.459 Sum_probs=30.5
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS 42 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~ 42 (250)
.+++++|.|+++|||+|+++.|.++++.+.+++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~ 55 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD 55 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC
Confidence 467899999999999999999999999998876
No 232
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.59 E-value=2e-07 Score=78.77 Aligned_cols=88 Identities=18% Similarity=0.297 Sum_probs=67.6
Q ss_pred CCCeEEEEEEc-CCChhHHhhhHHHHHHHHHcCC--CCEEEEE-c--------------------------CCCChhHHH
Q 025648 10 SHEYVAVLFYA-SWCPFSRNFRPSFSVLSSLYSS--IPHFAIE-E--------------------------SAIRPSILS 59 (250)
Q Consensus 10 ~~~~vlV~Fya-~wC~~C~~~~p~~e~la~~~~~--~~~v~~~-d--------------------------~~~~~~l~~ 59 (250)
.+++++|.||+ .||++|....|.+.++.++|++ +.++++. | .|...++++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 56899999999 9999999999999999999863 4444442 1 012347888
Q ss_pred hhCCC------ccCeEEEE--eCceeEEEeC----CCCHHHHHHHHHHhh
Q 025648 60 KYGVH------GFPTLFLL--NSSMRVRYHG----SRTLDSLVAFYSDVT 97 (250)
Q Consensus 60 ~~~I~------~~PTi~l~--~g~~~~~~~G----~~~~~~l~~fi~~~~ 97 (250)
.||+. .+|+++++ +|+.+..+.+ .++.+++.+.|+...
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~lq 205 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAFQ 205 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 99998 68999999 6777777665 456888888887653
No 233
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.58 E-value=1.6e-08 Score=80.38 Aligned_cols=89 Identities=15% Similarity=0.266 Sum_probs=65.9
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcCC--CCEEEEEc--------------------CCCChhHHHhhCCC--
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEE--------------------SAIRPSILSKYGVH-- 64 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d--------------------~~~~~~l~~~~~I~-- 64 (250)
+++++++.|| ++|||+|....|.++++.++|.+ +..+++.. +|.+.++++.|||.
T Consensus 32 ~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~ 111 (164)
T 4gqc_A 32 RGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVYHE 111 (164)
T ss_dssp TSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEE
T ss_pred CCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCCccc
Confidence 5788899988 99999999999999998888864 44444421 12334788889884
Q ss_pred --------ccCeEEEE--eCceeEEEeC-----CCCHHHHHHHHHHhhC
Q 025648 65 --------GFPTLFLL--NSSMRVRYHG-----SRTLDSLVAFYSDVTG 98 (250)
Q Consensus 65 --------~~PTi~l~--~g~~~~~~~G-----~~~~~~l~~fi~~~~~ 98 (250)
..|+++++ +|+....+.+ ..+.+++++.+++..+
T Consensus 112 ~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 112 DLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp EETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHHH
T ss_pred ccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHhc
Confidence 36888888 6777666654 2378899988888765
No 234
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.58 E-value=1.5e-07 Score=74.42 Aligned_cols=73 Identities=11% Similarity=0.059 Sum_probs=55.4
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcCCCCEEEEEc---------------------CCC-ChhHHHhhCCCc-
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSSIPHFAIEE---------------------SAI-RPSILSKYGVHG- 65 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~~~~v~~~d---------------------~~~-~~~l~~~~~I~~- 65 (250)
.+++++|.|| +.||++|....|.++++.++|+++.++++.- .+. ...+++.||+..
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~ 121 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKLSNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQLGVDIQ 121 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHSTTEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHHHHTTCEEC
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHHHHhCceec
Confidence 4679999999 8999999999999999999885444444310 122 456888899864
Q ss_pred --------cCeEEEE--eCceeEEEeC
Q 025648 66 --------FPTLFLL--NSSMRVRYHG 82 (250)
Q Consensus 66 --------~PTi~l~--~g~~~~~~~G 82 (250)
.|+++++ +|+.+..+.|
T Consensus 122 ~~~~~g~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 122 TGPLAGLTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp SSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred ccccCCccceeEEEEcCCCEEEEEEeC
Confidence 4999999 6788888864
No 235
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.58 E-value=1.4e-07 Score=80.20 Aligned_cols=88 Identities=13% Similarity=0.199 Sum_probs=67.3
Q ss_pred CCCe-EEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEEc-C-------------------------CCChhHHHh
Q 025648 10 SHEY-VAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIEE-S-------------------------AIRPSILSK 60 (250)
Q Consensus 10 ~~~~-vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~d-~-------------------------~~~~~l~~~ 60 (250)
.++. +|+.|+++||+.|....|.+.++.++|++ +.++++.- . |...++++.
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ 111 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARR 111 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHH
Confidence 4564 56688999999999999999999998863 44444421 1 224578999
Q ss_pred hCCC-------ccCeEEEE--eCceeEEEeCC----CCHHHHHHHHHHhh
Q 025648 61 YGVH-------GFPTLFLL--NSSMRVRYHGS----RTLDSLVAFYSDVT 97 (250)
Q Consensus 61 ~~I~-------~~PTi~l~--~g~~~~~~~G~----~~~~~l~~fi~~~~ 97 (250)
|||. ++|+++++ +|+.+..+.|. ++.++|.+.|+...
T Consensus 112 ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 112 LGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred hCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 9997 89999999 67777776664 57999999998764
No 236
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.57 E-value=7.1e-07 Score=74.36 Aligned_cols=87 Identities=10% Similarity=0.169 Sum_probs=70.6
Q ss_pred CeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCC--CChhHHHhhCCC--ccCeEEEEeC--ceeEEEe-CCC
Q 025648 12 EYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA--IRPSILSKYGVH--GFPTLFLLNS--SMRVRYH-GSR 84 (250)
Q Consensus 12 ~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~--~~~~l~~~~~I~--~~PTi~l~~g--~~~~~~~-G~~ 84 (250)
..+++.|+.+||++|.++.+.|+++|+.+++...+..+|++ ....+++.||+. .+|++++++. .....+. +..
T Consensus 132 ~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~ 211 (227)
T 4f9z_D 132 QIHLLLIMNKASPEYEENMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEV 211 (227)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCC
T ss_pred ceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCC
Confidence 44566777999999999999999999999987777777875 366788999998 8999999942 2234443 678
Q ss_pred CHHHHHHHHHHhhC
Q 025648 85 TLDSLVAFYSDVTG 98 (250)
Q Consensus 85 ~~~~l~~fi~~~~~ 98 (250)
+.+.|.+|+++.+.
T Consensus 212 t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 212 SVEHVQNFCDGFLS 225 (227)
T ss_dssp CHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhC
Confidence 99999999998764
No 237
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.53 E-value=1.8e-07 Score=75.95 Aligned_cols=33 Identities=15% Similarity=0.402 Sum_probs=29.2
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHH---HHHHHHcCC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSF---SVLSSLYSS 42 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~---e~la~~~~~ 42 (250)
.+++++|.|++.|||+|+++.|.+ +++.+.+++
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~ 48 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ 48 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC
Confidence 457899999999999999999987 688888875
No 238
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.52 E-value=5e-07 Score=71.20 Aligned_cols=74 Identities=11% Similarity=0.150 Sum_probs=55.5
Q ss_pred CCCeEEEEEE-cCCChhHH-hhhHHHHHHHHHcC--CCC-EEEEEc----------------------CCCChhHHHhhC
Q 025648 10 SHEYVAVLFY-ASWCPFSR-NFRPSFSVLSSLYS--SIP-HFAIEE----------------------SAIRPSILSKYG 62 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~-~~~p~~e~la~~~~--~~~-~v~~~d----------------------~~~~~~l~~~~~ 62 (250)
.+++++|.|| ++||++|. ...|.++++.++|+ ++. .+++.- .|.+.++++.||
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHALG 113 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHHHcC
Confidence 5789999999 89999999 89999999998874 455 555521 122346788888
Q ss_pred CC------c-----cCeEEEE-eCceeEEEeCC
Q 025648 63 VH------G-----FPTLFLL-NSSMRVRYHGS 83 (250)
Q Consensus 63 I~------~-----~PTi~l~-~g~~~~~~~G~ 83 (250)
+. + .|+++++ +|+....+.|.
T Consensus 114 v~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~~ 146 (162)
T 1tp9_A 114 LELDLQEKGLGTRSRRFALLVDDLKVKAANIEG 146 (162)
T ss_dssp CEEEETTTTSEEEECCEEEEEETTEEEEEEECS
T ss_pred cccccccCCCCccceeEEEEEECCEEEEEEeeC
Confidence 86 3 7998888 67666666654
No 239
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.51 E-value=5.3e-08 Score=74.50 Aligned_cols=75 Identities=13% Similarity=0.254 Sum_probs=49.9
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCC---h----hHHHhhCCCccCeEEEEeCceeEEEe---CCC
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIR---P----SILSKYGVHGFPTLFLLNSSMRVRYH---GSR 84 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~---~----~l~~~~~I~~~PTi~l~~g~~~~~~~---G~~ 84 (250)
++.|+++||++|+++.+.++++.-. +..++.+.. + .+.+.+++.++|+++ ++|+.+..+. +..
T Consensus 29 vvvf~~~~Cp~C~~~~~~L~~~~i~------~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~-i~G~~igg~~~l~~~~ 101 (130)
T 2cq9_A 29 VVIFSKTSCSYCTMAKKLFHDMNVN------YKVVELDLLEYGNQFQDALYKMTGERTVPRIF-VNGTFIGGATDTHRLH 101 (130)
T ss_dssp EEEEECSSCSHHHHHHHHHHHHTCC------CEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE-ETTEEEEEHHHHHHHH
T ss_pred EEEEEcCCChHHHHHHHHHHHcCCC------cEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE-ECCEEEcChHHHHHHH
Confidence 4449999999999999999987422 223344333 3 378899999999984 3777654432 122
Q ss_pred CHHHHHHHHHHh
Q 025648 85 TLDSLVAFYSDV 96 (250)
Q Consensus 85 ~~~~l~~fi~~~ 96 (250)
....|.++|...
T Consensus 102 ~~~~L~~~L~~~ 113 (130)
T 2cq9_A 102 KEGKLLPLVHQC 113 (130)
T ss_dssp HHTSSHHHHHHH
T ss_pred HcCcHHHHHHHc
Confidence 344566666654
No 240
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.50 E-value=6.2e-07 Score=72.52 Aligned_cols=33 Identities=21% Similarity=0.411 Sum_probs=30.4
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS 42 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~ 42 (250)
.++++++.|+.+|||+|+.+.|.++++.+.+++
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~ 53 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS 53 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC
Confidence 467899999999999999999999999999875
No 241
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.48 E-value=2.1e-07 Score=83.29 Aligned_cols=131 Identities=8% Similarity=-0.002 Sum_probs=97.0
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-e-CceeEEEeCC-CCH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-N-SSMRVRYHGS-RTL 86 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~-g~~~~~~~G~-~~~ 86 (250)
.+++++|.||++||. ...+.|.++|..+.+...++... +.+++++|+|.. |+|++| . .+....|.|. ++.
T Consensus 143 ~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~~~~F~~~~---~~~~~~~~~v~~-p~i~lf~~~~~~~~~y~g~~~~~ 215 (367)
T 3us3_A 143 EDEIKLIGYFKNKDS---EHYKAFKEAAEEFHPYIPFFATF---DSKVAKKLTLKL-NEIDFYEAFMEEPVTIPDKPNSE 215 (367)
T ss_dssp CSSCEEEEECSCTTC---HHHHHHHHHHHHHTTTSCEEEEC---CHHHHHHHTCCT-TCEEEECTTCSSCEECSSSSCCH
T ss_pred CCCcEEEEEECCCCc---hHHHHHHHHHHhhcCCcEEEEEC---CHHHHHHcCCCC-CeEEEEcCCCCCCeecCCCCCCH
Confidence 468899999999865 56778999999998766666653 468999999996 999999 3 3667889995 999
Q ss_pred HHHHHHHHHhhCCCCCCCCCCCccccCCCC-CcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH
Q 025648 87 DSLVAFYSDVTGMNTASLDKISPDKVGKAS-NHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV 154 (250)
Q Consensus 87 ~~l~~fi~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~ 154 (250)
++|.+||....-+.+.+++.+++..+.... .......| .. +++.+++++ .+.+..+|..|.
T Consensus 216 ~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~~~~~~~~f---~~--~~~~~~~~~--~~~l~~vA~~~~ 277 (367)
T 3us3_A 216 EEIVNFVEEHRRSTLRKLKPESMYETWEDDMDGIHIVAF---AE--EADPDGYEF--LEILKSVAQDNT 277 (367)
T ss_dssp HHHHHHHHHTCSCSEEECCGGGHHHHHHSCBTTEEEEEE---CC--TTSHHHHHH--HHHHHHHHHHTT
T ss_pred HHHHHHHHHcCccceeecChhhHHHHHhhccCCcEEEEE---Ec--CCChhHHHH--HHHHHHHHHHcC
Confidence 999999999988888888888765443211 11111111 11 455567788 788999999875
No 242
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.47 E-value=5.7e-07 Score=73.66 Aligned_cols=83 Identities=12% Similarity=0.103 Sum_probs=59.8
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcCCCCEEEEEc---------------------CCC-ChhHHHhhCCC--
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSSIPHFAIEE---------------------SAI-RPSILSKYGVH-- 64 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~~~~v~~~d---------------------~~~-~~~l~~~~~I~-- 64 (250)
.+++++|.|| +.||++|....|.++++.++|.++.++++.. .|. ..++++.|||.
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~ygv~~~ 156 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGELENTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFKQAYGVAIT 156 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTSTTEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHHHHTTCEEC
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHHHHhCceee
Confidence 5689999999 7899999999999999999986554444420 112 45678888886
Q ss_pred -------ccCeEEEE--eCceeEEEeCC-----CCHHHHHHH
Q 025648 65 -------GFPTLFLL--NSSMRVRYHGS-----RTLDSLVAF 92 (250)
Q Consensus 65 -------~~PTi~l~--~g~~~~~~~G~-----~~~~~l~~f 92 (250)
..|+++++ +|+.+..+.+. .+.+++++.
T Consensus 157 ~~~~~g~~~p~~~lID~~G~I~~~~~~~~~~~~~~~~~~l~~ 198 (200)
T 3zrd_A 157 EGPLAGLTARAVVVLDGQDNVIYSELVNEITTEPNYDAALAA 198 (200)
T ss_dssp SSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHH
T ss_pred cccCCCccccEEEEECCCCeEEEEEecCCcccCCCHHHHHHh
Confidence 26999999 67777766542 345555543
No 243
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.46 E-value=3.7e-07 Score=77.77 Aligned_cols=88 Identities=18% Similarity=0.280 Sum_probs=66.8
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcCC--CCEEEEE-c--------------------------CCCChhHHH
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIE-E--------------------------SAIRPSILS 59 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~--~~~v~~~-d--------------------------~~~~~~l~~ 59 (250)
.+++++|.|| +.||++|....|.+.++.++|++ +.++++. | .|...++++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 5689999999 99999999999999999999853 4444442 0 012347888
Q ss_pred hhCCC------ccCeEEEE--eCceeEEEeC----CCCHHHHHHHHHHhh
Q 025648 60 KYGVH------GFPTLFLL--NSSMRVRYHG----SRTLDSLVAFYSDVT 97 (250)
Q Consensus 60 ~~~I~------~~PTi~l~--~g~~~~~~~G----~~~~~~l~~fi~~~~ 97 (250)
.|||. .+|+++++ +|+.+..+.+ .++.+++.+.|+...
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~alq 219 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 219 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhhc
Confidence 99986 58999999 6777777665 467888888887653
No 244
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.46 E-value=7.3e-07 Score=70.90 Aligned_cols=81 Identities=15% Similarity=0.144 Sum_probs=58.8
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHc--CCCCEEEEEcCC-----------------------------------
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLY--SSIPHFAIEESA----------------------------------- 52 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~--~~~~~v~~~d~~----------------------------------- 52 (250)
..+++++.|+..+||+|+++.|.++++.+.| ++.+.+......
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~lf~~~ 105 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMFATQ 105 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECCCCSTTTHHHHHHHTTCCTTCHHHHHHHHHHHHHTH
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHcC
Confidence 3567899999999999999999999998888 553222221100
Q ss_pred -------------------------------CChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHH
Q 025648 53 -------------------------------IRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYS 94 (250)
Q Consensus 53 -------------------------------~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~ 94 (250)
....+++++||+|+||+++ +|+ .+.|..+.+.|.+.|+
T Consensus 106 ~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~a~~~gv~gtPt~vv-ng~---~~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 106 DEWGNLTLEEVATYAEKNLGLKEQKDATLVSAVIAEANAAHIQFVPTIII-GEY---IFDESVTEEELRGYIE 174 (175)
T ss_dssp HHHTTSCHHHHHHHHHHTSCCCCCCCHHHHHHHHHHHHHHTCCSSCEEEE-TTE---EECTTCCHHHHHHHHT
T ss_pred hhhccCCHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHcCCCCcCeEEE-CCE---EccCCCCHHHHHHHhc
Confidence 0123467789999999655 876 3578889999988775
No 245
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.45 E-value=2.8e-07 Score=65.56 Aligned_cols=72 Identities=13% Similarity=0.110 Sum_probs=51.6
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCC--CC----hhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA--IR----PSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDS 88 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~--~~----~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~ 88 (250)
++.|+++||++|+++.+.++++.-.| ..+.++..+ .. +++.+.+++.++|++++ +|+ ..|+.+.+.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~gi~~---~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~-~g~----~i~G~~~~~ 85 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREGVDF---EVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK-GDK----HVLGYNEEK 85 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHTCCC---EEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE-TTE----EEESCCHHH
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCc---EEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE-CCE----EEeCCCHHH
Confidence 66799999999999999998874332 222222111 22 56778899999999987 664 334568999
Q ss_pred HHHHHH
Q 025648 89 LVAFYS 94 (250)
Q Consensus 89 l~~fi~ 94 (250)
|.+++.
T Consensus 86 l~~~l~ 91 (92)
T 3ic4_A 86 LKELIR 91 (92)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 998875
No 246
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.43 E-value=7.7e-08 Score=75.28 Aligned_cols=57 Identities=18% Similarity=0.335 Sum_probs=40.6
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCC---h----hHHHhhCCCccCeEEEEeCceeE
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIR---P----SILSKYGVHGFPTLFLLNSSMRV 78 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~---~----~l~~~~~I~~~PTi~l~~g~~~~ 78 (250)
++.|+++|||+|+++.+.++++.-.| ..+ +.+.. + .+.+.+|+.++|+++ ++|+.+.
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~~i~~---~~v---dId~~~~~~~~~~~L~~~~g~~tvP~if-i~G~~ig 114 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDMNVNY---KVV---ELDLLEYGNQFQDALYKMTGERTVPRIF-VNGTFIG 114 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHTCCC---EEE---EGGGCTTHHHHHHHHHHHHSCCCSCEEE-ETTEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHcCCCe---EEE---ECccCcCCHHHHHHHHHHhCCCCcCeEE-ECCEEEe
Confidence 44499999999999999999874322 222 33322 3 478899999999984 3776543
No 247
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.42 E-value=4.4e-07 Score=64.20 Aligned_cols=68 Identities=18% Similarity=0.406 Sum_probs=47.8
Q ss_pred EEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCC--CChhHHHhh-CCCccCeEEEEeCceeEEEeCCCCHHHHH
Q 025648 14 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA--IRPSILSKY-GVHGFPTLFLLNSSMRVRYHGSRTLDSLV 90 (250)
Q Consensus 14 vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~--~~~~l~~~~-~I~~~PTi~l~~g~~~~~~~G~~~~~~l~ 90 (250)
.++.|+++||++|+++.+.+++.. + .+...|.+ ..+++.+++ ++.++|++++ +|+.+. ..++|.
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~-----i-~~~~vdv~~~~~~~l~~~~~~~~~vP~l~~-~g~~i~------g~~~i~ 73 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG-----V-KYTDIDASTSLRQEMVQRANGRNTFPQIFI-GDYHVG------GCDDLY 73 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT-----C-CEEEECSCHHHHHHHHHHHHSSCCSCEEEE-TTEECC------SHHHHH
T ss_pred eEEEEECCCChhHHHHHHHHHHcC-----C-CcEEEECCHHHHHHHHHHhCCCCCcCEEEE-CCEEEe------ChHHHH
Confidence 377899999999999999998763 2 23444554 456788889 9999999853 765432 335555
Q ss_pred HHHH
Q 025648 91 AFYS 94 (250)
Q Consensus 91 ~fi~ 94 (250)
++++
T Consensus 74 ~~~~ 77 (89)
T 2klx_A 74 ALEN 77 (89)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 248
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=98.41 E-value=6.8e-07 Score=72.33 Aligned_cols=86 Identities=15% Similarity=0.126 Sum_probs=64.7
Q ss_pred CCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEE--E-----------------cCCC------------------
Q 025648 11 HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAI--E-----------------ESAI------------------ 53 (250)
Q Consensus 11 ~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~--~-----------------d~~~------------------ 53 (250)
+++++|.|++.|||||+++.|.++++.+.+ ++.+... . ....
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~v~~~~~p~~~~~~~~~aa~a~~Aa~~q~g~~~~~~~~~~lf~a~~~~~ 100 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-GTDIGKMHITFNQSAHIASMFYYAAEMQVDGAPDHAFMEDLFAATQMGE 100 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-TSCCEEEECCSSSHHHHHHHHHHHHHTTSSSSCCHHHHHHHHHHHTCCT
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-CCeEEEEeccCCccchHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHhc
Confidence 689999999999999999999999999887 4221111 0 0000
Q ss_pred C----------------------------------------hhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHH
Q 025648 54 R----------------------------------------PSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFY 93 (250)
Q Consensus 54 ~----------------------------------------~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi 93 (250)
. ..++.++||+|+||+++ ||+......|..+.+.+.+.|
T Consensus 101 ~~~~~~~~~~L~~~a~~~Gl~d~~~~~~~~~~~~~~~v~~~~~~a~~~gv~GtPtfvv-ng~~~v~~~Ga~~~e~~~~~i 179 (185)
T 3feu_A 101 GTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRDTLIKKVDNAKMLSEKSGISSVPTFVV-NGKYNVLIGGHDDPKQIADTI 179 (185)
T ss_dssp TSCHHHHHHHHHHHHHTTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCCSSSEEEE-TTTEEECGGGCSSHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCEEEE-CCEEEEecCCCCCHHHHHHHH
Confidence 0 03356778999999987 888777778999999999998
Q ss_pred HHhhC
Q 025648 94 SDVTG 98 (250)
Q Consensus 94 ~~~~~ 98 (250)
+..+.
T Consensus 180 ~~ll~ 184 (185)
T 3feu_A 180 RYLLE 184 (185)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 87653
No 249
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.41 E-value=2.3e-06 Score=68.87 Aligned_cols=33 Identities=12% Similarity=0.279 Sum_probs=29.9
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSS 42 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~ 42 (250)
..+++++.|+.+|||+|..+.|.+.++.+.+++
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~ 56 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK 56 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC
Confidence 356799999999999999999999999998875
No 250
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.41 E-value=1e-06 Score=70.08 Aligned_cols=74 Identities=4% Similarity=-0.019 Sum_probs=52.5
Q ss_pred CCCeEEEEEE-cCCChhHHh-hhHHHHHHHHHcC--CC-CEEEEEc----------------------CCCChhHHHhhC
Q 025648 10 SHEYVAVLFY-ASWCPFSRN-FRPSFSVLSSLYS--SI-PHFAIEE----------------------SAIRPSILSKYG 62 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~-~~p~~e~la~~~~--~~-~~v~~~d----------------------~~~~~~l~~~~~ 62 (250)
.+++++|.|| ++|||+|+. ..|.|+++.++|. ++ ..+++.. .|...++++.||
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~~g 109 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKVQMLADPGGAFTKAVD 109 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcceEEEECCCCcHHHHcC
Confidence 5678888887 999999999 9999999988874 45 5555521 112345677777
Q ss_pred CCcc-----------CeEEEE-eCceeEEEeCC
Q 025648 63 VHGF-----------PTLFLL-NSSMRVRYHGS 83 (250)
Q Consensus 63 I~~~-----------PTi~l~-~g~~~~~~~G~ 83 (250)
+... |+.+++ +|+.+..+.+.
T Consensus 110 v~~~~~~~~g~~~~~p~t~lI~~G~I~~~~~~~ 142 (167)
T 2wfc_A 110 MELDLSAVLGNVRSKRYSLVIEDGVVTKVNVEP 142 (167)
T ss_dssp CEECCHHHHSSCEECCEEEEEETTEEEEEEECT
T ss_pred CccccccccCcccceEEEEEEeCCEEEEEEecC
Confidence 7643 887777 66666666553
No 251
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.40 E-value=1.8e-07 Score=73.23 Aligned_cols=83 Identities=17% Similarity=0.351 Sum_probs=61.3
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEE----------------------------------------
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAI---------------------------------------- 48 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~---------------------------------------- 48 (250)
.+.+.++|.|..++||+|+++.+.++++ +++..+.+
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~ 87 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM----TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVG 87 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC----CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTT
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc----CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCc
Confidence 4567899999999999999999988764 33211111
Q ss_pred -EcCC----CChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 49 -EESA----IRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 49 -~d~~----~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
..|+ ++.++++++||+++||+++-+|+ .+.|..+.+.|.+.|++...
T Consensus 88 ~~~~~~~v~~~~~la~~~gI~gtPt~vi~nG~---~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 88 GSICDNPVAETTSLGEQFGFNGTPTLVFPNGR---TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp CCCCSCSHHHHHHHHHHTTCCSSCEEECTTSC---EEESCCCTTHHHHHHHHTSC
T ss_pred cHHHHHHHHHHHHHHHHhCCCccCEEEEECCE---EeeCCCCHHHHHHHHHHHHH
Confidence 0111 13478899999999999984554 47799999999999988653
No 252
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.37 E-value=1.2e-06 Score=70.93 Aligned_cols=74 Identities=7% Similarity=0.047 Sum_probs=52.0
Q ss_pred CCCe-EEEEEEcCCChhHHh-hhHHHHHHHHHcC--CCC-EEEEEcC----------------------CCChhHHHhhC
Q 025648 10 SHEY-VAVLFYASWCPFSRN-FRPSFSVLSSLYS--SIP-HFAIEES----------------------AIRPSILSKYG 62 (250)
Q Consensus 10 ~~~~-vlV~Fya~wC~~C~~-~~p~~e~la~~~~--~~~-~v~~~d~----------------------~~~~~l~~~~~ 62 (250)
.+++ +|+.|+++|||+|+. ..|.|++++++|+ ++. .+++.-. |...++++.||
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yG 134 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTKAIG 134 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHHHHcC
Confidence 3554 555566999999999 6999999999885 455 5555211 12245778888
Q ss_pred CC-----------ccCeEEEE-eCceeEEEeCC
Q 025648 63 VH-----------GFPTLFLL-NSSMRVRYHGS 83 (250)
Q Consensus 63 I~-----------~~PTi~l~-~g~~~~~~~G~ 83 (250)
+. ..|+.+++ +|+....+.+.
T Consensus 135 v~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~ 167 (184)
T 3uma_A 135 MEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEE 167 (184)
T ss_dssp CEEEEGGGTCEEEECCEEEEEETTEEEEEEECS
T ss_pred CceeccccCCcccceeEEEEECCCEEEEEEEeC
Confidence 85 35778888 77777777653
No 253
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.36 E-value=3.9e-07 Score=68.46 Aligned_cols=60 Identities=12% Similarity=0.264 Sum_probs=41.6
Q ss_pred EEEEEcCCChhHHhh-hHHHHHHHHHcCCCCEEEEEcCCCC-------hhHHHhhCCCccCeEEEEeCceeE
Q 025648 15 AVLFYASWCPFSRNF-RPSFSVLSSLYSSIPHFAIEESAIR-------PSILSKYGVHGFPTLFLLNSSMRV 78 (250)
Q Consensus 15 lV~Fya~wC~~C~~~-~p~~e~la~~~~~~~~v~~~d~~~~-------~~l~~~~~I~~~PTi~l~~g~~~~ 78 (250)
++.|+++|||+|+++ .+.++++.. .. ..+...|.+.. ..+.+.+|+.++|+++ ++|+.+.
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~--~~-i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~vf-i~g~~ig 94 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV--PR-SKVLVLQLNDMKEGADIQAALYEINGQRTVPNIY-INGKHIG 94 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC--CG-GGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEE-ETTEEEE
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC--CC-CCeEEEECccCCChHHHHHHHHHHhCCCCcCEEE-ECCEEEE
Confidence 666999999999999 888876541 11 23334444433 3588899999999973 3776543
No 254
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.35 E-value=1.1e-06 Score=70.08 Aligned_cols=72 Identities=4% Similarity=0.003 Sum_probs=49.5
Q ss_pred CeEEEEEEcCCChhHHhh-hHHHHHHHHHcC--CCC-EEEEEcC----------------------CCChhHHHhhCCCc
Q 025648 12 EYVAVLFYASWCPFSRNF-RPSFSVLSSLYS--SIP-HFAIEES----------------------AIRPSILSKYGVHG 65 (250)
Q Consensus 12 ~~vlV~Fya~wC~~C~~~-~p~~e~la~~~~--~~~-~v~~~d~----------------------~~~~~l~~~~~I~~ 65 (250)
+++|+.||++||++|+.. .|.|+++.++|. ++. ++++.-. |...++++.||+..
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~ 124 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTT 124 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEE
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCcc
Confidence 477888999999999998 999999998874 466 6666311 12235667777752
Q ss_pred -----------cCeEEEE-eCceeEEEeCC
Q 025648 66 -----------FPTLFLL-NSSMRVRYHGS 83 (250)
Q Consensus 66 -----------~PTi~l~-~g~~~~~~~G~ 83 (250)
.|+.+++ +|+....+.|.
T Consensus 125 ~~~~~~~g~~~~~~t~~I~~G~I~~~~~~~ 154 (171)
T 2pwj_A 125 DLSAGLLGIRSERWSAYVVDGKVKALNVEE 154 (171)
T ss_dssp ECTTTTCCEEECCEEEEEETTEEEEEEECS
T ss_pred ccccccCCcccceeEEEEECCEEEEEEeec
Confidence 3455555 66666666653
No 255
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.33 E-value=1.7e-06 Score=69.36 Aligned_cols=85 Identities=7% Similarity=-0.052 Sum_probs=57.1
Q ss_pred CCCeEEEEE-EcCCChhHH-hhhHHHHHHHHHcCC--CCEEEEEcC-----------------------CCChhHHHhhC
Q 025648 10 SHEYVAVLF-YASWCPFSR-NFRPSFSVLSSLYSS--IPHFAIEES-----------------------AIRPSILSKYG 62 (250)
Q Consensus 10 ~~~~vlV~F-ya~wC~~C~-~~~p~~e~la~~~~~--~~~v~~~d~-----------------------~~~~~l~~~~~ 62 (250)
.+++++|.| +++||++|. ...|.|++++++|++ +..++++.. |...++++.||
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yG 121 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETD 121 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHHHHHT
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHHHHhC
Confidence 456555555 599999999 589999999998853 555552211 12346888888
Q ss_pred CC-------------ccCeEEEE-eCceeEEEeCC----CCHHHHHHHHH
Q 025648 63 VH-------------GFPTLFLL-NSSMRVRYHGS----RTLDSLVAFYS 94 (250)
Q Consensus 63 I~-------------~~PTi~l~-~g~~~~~~~G~----~~~~~l~~fi~ 94 (250)
|. ..|+.+++ +|+....+.+. ++.++..+.|+
T Consensus 122 v~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~~~~g~~~~~~~~vl~ 171 (173)
T 3mng_A 122 LLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIIS 171 (173)
T ss_dssp CBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECTTSSCSSTTSHHHHHH
T ss_pred CCcccccccccCCcceEEEEEEEECCEEEEEEEeCCCCCcchHHHHHHHH
Confidence 86 34999999 67776666653 45555555443
No 256
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.32 E-value=3.7e-06 Score=60.47 Aligned_cols=77 Identities=14% Similarity=0.282 Sum_probs=54.7
Q ss_pred EEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhh-----CCCccCeEEEEeCceeEEEeCCCCHHH
Q 025648 14 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKY-----GVHGFPTLFLLNSSMRVRYHGSRTLDS 88 (250)
Q Consensus 14 vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~-----~I~~~PTi~l~~g~~~~~~~G~~~~~~ 88 (250)
.++.|.++|||+|++....+++. ++.+ ...|.+.+++..+.+ |.+++|+|++-+|.... ..+.++
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~-----gi~y-~~idi~~d~~~~~~~~~~~~G~~tVP~I~i~Dg~~l~----~~~~~e 74 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN-----RIAY-DEVDIEHNRAAAEFVGSVNGGNRTVPTVKFADGSTLT----NPSADE 74 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT-----TCCC-EEEETTTCHHHHHHHHHHSSSSSCSCEEEETTSCEEE----SCCHHH
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc-----CCce-EEEEcCCCHHHHHHHHHHcCCCCEeCEEEEeCCEEEe----CCCHHH
Confidence 37789999999999999888763 3333 333555555543332 78899998764565432 458899
Q ss_pred HHHHHHHhhCCC
Q 025648 89 LVAFYSDVTGMN 100 (250)
Q Consensus 89 l~~fi~~~~~~~ 100 (250)
|.+.+.+..|.+
T Consensus 75 l~~~L~el~gL~ 86 (92)
T 2lqo_A 75 VKAKLVKIAGLE 86 (92)
T ss_dssp HHHHHHHHHCCS
T ss_pred HHHHHHHhcCCc
Confidence 999999998865
No 257
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.30 E-value=5.5e-06 Score=62.83 Aligned_cols=80 Identities=15% Similarity=0.193 Sum_probs=65.8
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eC-ceeEEEeC----
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NS-SMRVRYHG---- 82 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g-~~~~~~~G---- 82 (250)
+.+++++|-|+++||++| .+.|.++|+.+ +...++..+ +++++++|++. .|++++| +. .....|.|
T Consensus 37 ~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~---~~~v~~~~~v~-~~~vvlfkkfde~~~~~~g~~~~ 108 (124)
T 2l4c_A 37 AATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGIST---DSEVLTHYNIT-GNTICLFRLVDNEQLNLEDEDIE 108 (124)
T ss_dssp HTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEEC---CHHHHHHTTCC-SSCEEEEETTTTEEEEECHHHHT
T ss_pred hcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEEC---hHHHHHHcCCC-CCeEEEEEcCCCCceeecCcccC
Confidence 457889999999999999 67899999999 444555543 37899999999 8999999 43 46678886
Q ss_pred CCCHHHHHHHHHHh
Q 025648 83 SRTLDSLVAFYSDV 96 (250)
Q Consensus 83 ~~~~~~l~~fi~~~ 96 (250)
..+.++|.+||...
T Consensus 109 ~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 109 SIDATKLSRFIEIN 122 (124)
T ss_dssp TCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh
Confidence 78999999999875
No 258
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.28 E-value=8.9e-09 Score=75.97 Aligned_cols=44 Identities=11% Similarity=0.198 Sum_probs=38.7
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
.+++ |||++|+.+ .|.+..+|..+ ++.+|+|+++||+++|.+|.
T Consensus 26 ~F~a--~wC~~C~~~--~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G~ 84 (105)
T 3zzx_A 26 DFYA--TWCGPCKMI--APKLEELSQSMSDVVFLKVDVDECEDIAQDNQIACMPTFLFMKNGQ 84 (105)
T ss_dssp EEEC--TTCHHHHHH--HHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCBSSEEEEEETTE
T ss_pred EEEC--CCCCCccCC--CcchhhhhhccCCeEEEEEecccCHHHHHHcCCCeecEEEEEECCE
Confidence 3477 999999999 99999999886 35999999999999998765
No 259
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=98.28 E-value=2e-06 Score=59.38 Aligned_cols=68 Identities=16% Similarity=0.329 Sum_probs=46.1
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCC----hhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIR----PSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLV 90 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~----~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~ 90 (250)
++.|+++||++|+++.+.+++.. +. +...+.+.+ .++.+.+++.++|++++ +|+.+. | .++|.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~-----i~-~~~~~i~~~~~~~~~~~~~~~~~~vP~l~~-~g~~i~---g---~~~i~ 69 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSKG-----VS-FQELPIDGNAAKREEMIKRSGRTTVPQIFI-DAQHIG---G---YDDLY 69 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHT-----CC-CEEEECTTCSHHHHHHHHHHSSCCSCEEEE-TTEEEE---S---HHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHCC-----CC-cEEEECCCCHHHHHHHHHHhCCCCcCEEEE-CCEEEe---C---HHHHH
Confidence 67799999999999999998752 22 223333333 34667899999999853 775432 2 35677
Q ss_pred HHHHH
Q 025648 91 AFYSD 95 (250)
Q Consensus 91 ~fi~~ 95 (250)
+++++
T Consensus 70 ~~~~~ 74 (82)
T 1fov_A 70 ALDAR 74 (82)
T ss_dssp HHHHT
T ss_pred HHHHC
Confidence 76654
No 260
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=98.27 E-value=4.4e-06 Score=60.72 Aligned_cols=62 Identities=13% Similarity=0.129 Sum_probs=42.9
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHH----hh-CCCccCeEEEEeCcee
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILS----KY-GVHGFPTLFLLNSSMR 77 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~----~~-~I~~~PTi~l~~g~~~ 77 (250)
+.+..-++.|+++|||+|+++.+.++++.-. +...|.+.+++..+ .. |..++|+++ ++|+.+
T Consensus 12 ~~~~~~v~vy~~~~Cp~C~~ak~~L~~~~i~------y~~idI~~~~~~~~~l~~~~~g~~~vP~if-i~g~~i 78 (99)
T 3qmx_A 12 SAVSAKIEIYTWSTCPFCMRALALLKRKGVE------FQEYCIDGDNEAREAMAARANGKRSLPQIF-IDDQHI 78 (99)
T ss_dssp SCCCCCEEEEECTTCHHHHHHHHHHHHHTCC------CEEEECTTCHHHHHHHHHHTTTCCCSCEEE-ETTEEE
T ss_pred ccCCCCEEEEEcCCChhHHHHHHHHHHCCCC------CEEEEcCCCHHHHHHHHHHhCCCCCCCEEE-ECCEEE
Confidence 3445667889999999999999999987422 23335555554444 34 999999884 377543
No 261
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.26 E-value=2.7e-08 Score=75.01 Aligned_cols=66 Identities=18% Similarity=0.085 Sum_probs=48.8
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhh
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLP 164 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fP 164 (250)
+..++.++|+..+......+++ .+++ |||++|+.+ .|.+..++..+ ++.+|+|.++|
T Consensus 19 v~~l~~~~f~~~~~~~~~~~lv---~f~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 91 (130)
T 2dml_A 19 VIELTPSNFNREVIQSDGLWLV---EFYA--PWCGHCQRL--TPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFP 91 (130)
T ss_dssp SEECCTTTHHHHTTTCSSCEEE---EEEC--TTCSTTGGG--HHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSS
T ss_pred cEECCHHHHHHHHhcCCCeEEE---EEEC--CCCHHHHhh--CHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccC
Confidence 3456777777644332322222 3466 899999999 99999999876 34899999999
Q ss_pred hHHHHhhhH
Q 025648 165 TLLIFAQFT 173 (250)
Q Consensus 165 ti~~f~~~~ 173 (250)
|+++|.+|.
T Consensus 92 t~~~~~~~~ 100 (130)
T 2dml_A 92 TIKIFGANK 100 (130)
T ss_dssp EEEEESSCT
T ss_pred EEEEEeCCC
Confidence 999998766
No 262
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.26 E-value=5.2e-06 Score=69.21 Aligned_cols=85 Identities=8% Similarity=0.160 Sum_probs=62.9
Q ss_pred eEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEE-c-----------------------------CCCChhHHHh
Q 025648 13 YVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIE-E-----------------------------SAIRPSILSK 60 (250)
Q Consensus 13 ~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~-d-----------------------------~~~~~~l~~~ 60 (250)
.+|+.|+++||+.|....|.+.++.++|++ +..+++. | .|...++++.
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ 113 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAIL 113 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHHH
Confidence 566667899999999999999999998864 3344431 0 1123467888
Q ss_pred hCCC------------ccCeEEEE--eCceeEEEeC----CCCHHHHHHHHHHhh
Q 025648 61 YGVH------------GFPTLFLL--NSSMRVRYHG----SRTLDSLVAFYSDVT 97 (250)
Q Consensus 61 ~~I~------------~~PTi~l~--~g~~~~~~~G----~~~~~~l~~fi~~~~ 97 (250)
||+. .+|+++++ +|+.+..+.+ .++.++|.+.|+.+.
T Consensus 114 ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 114 LGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp TTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred hCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 9984 37999999 6777777765 468899999988764
No 263
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=98.26 E-value=1.5e-06 Score=60.98 Aligned_cols=75 Identities=13% Similarity=0.239 Sum_probs=50.9
Q ss_pred eEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCC----hhHHHhhCC-----CccCeEEEEeCceeEEEeCC
Q 025648 13 YVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIR----PSILSKYGV-----HGFPTLFLLNSSMRVRYHGS 83 (250)
Q Consensus 13 ~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~----~~l~~~~~I-----~~~PTi~l~~g~~~~~~~G~ 83 (250)
..++.|+++|||+|++..+.++++.-.| ..+.+ |.+.. .++.+.+|. .++|++++ +|+.+ |
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~i~~---~~~~v-d~~~~~~~~~el~~~~g~~~~~~~~vP~i~i-~g~~i----~- 73 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENNIAF---DETII-DDYAQRSKFYDEMNQSGKVIFPISTVPQIFI-DDEHI----G- 73 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTTCCC---EEEEC-CSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE-TTEEE----E-
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcCCCc---eEEEe-ecCCChhHHHHHHHHhCCCCCCCCccCEEEE-CCEEE----e-
Confidence 3478899999999999998887654222 12222 22222 457788888 99999965 77543 2
Q ss_pred CCHHHHHHHHHHhhC
Q 025648 84 RTLDSLVAFYSDVTG 98 (250)
Q Consensus 84 ~~~~~l~~fi~~~~~ 98 (250)
..+++.+++++..+
T Consensus 74 -g~~~i~~~~~~~~~ 87 (89)
T 3msz_A 74 -GFTELKANADKILN 87 (89)
T ss_dssp -SHHHHHHTHHHHTT
T ss_pred -ChHHHHHHHHHHhc
Confidence 56788888877654
No 264
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=98.25 E-value=1.1e-05 Score=68.01 Aligned_cols=98 Identities=16% Similarity=0.152 Sum_probs=80.3
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEe-C-------ceeEE
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLN-S-------SMRVR 79 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~-g-------~~~~~ 79 (250)
++.+++++|-|+++| |....+.|.++|+.+.+...++.. .+.+++++|++.+ |++++|. + .....
T Consensus 21 l~~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~~~F~~~---~~~~v~~~~~~~~-p~i~~fk~~~~~~kf~e~~~~ 93 (252)
T 2h8l_A 21 ISDKDASIVGFFDDS---FSEAHSEFLKAASNLRDNYRFAHT---NVESLVNEYDDNG-EGIILFRPSHLTNKFEDKTVA 93 (252)
T ss_dssp HTSSSCEEEEEESCT---TSHHHHHHHHHHHHTTTTSCEEEE---CCHHHHHHHCSSS-EEEEEECCGGGCCTTSCSEEE
T ss_pred hhcCCeEEEEEECCC---CChHHHHHHHHHHhcccCcEEEEE---ChHHHHHHhCCCC-CcEEEEcchhhcccccccccc
Confidence 445678999999998 456677999999999765556554 2477999999997 9999993 2 35678
Q ss_pred E-eCCCCHHHHHHHHHHhhCCCCCCCCCCCcccc
Q 025648 80 Y-HGSRTLDSLVAFYSDVTGMNTASLDKISPDKV 112 (250)
Q Consensus 80 ~-~G~~~~~~l~~fi~~~~~~~~~~l~~~~~~~~ 112 (250)
| .|..+.++|.+||....-+-+.+++.+++..+
T Consensus 94 y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~ 127 (252)
T 2h8l_A 94 YTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLI 127 (252)
T ss_dssp CCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHH
T ss_pred cCCCCcCHHHHHHHHHhcccCCeeecccccHhhh
Confidence 8 89999999999999999888889999988776
No 265
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.25 E-value=9.9e-09 Score=89.50 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=67.0
Q ss_pred CCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH------------------HHHHHHHH
Q 025648 100 NTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF------------------VLLRLVYI 161 (250)
Q Consensus 100 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f------------------~~~~~~i~ 161 (250)
.+.+++.++|++++......+++ .+|+ |||++|+.+ .|.|+.+|..+ ++.+|+|.
T Consensus 18 ~vv~lt~~~f~~~i~~~~~~vlV---~F~A--~wC~~C~~~--~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~ 90 (298)
T 3ed3_A 18 HISELTPKSFDKAIHNTNYTSLV---EFYA--PWCGHCKKL--SSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVN 90 (298)
T ss_dssp TCEECCHHHHHHHHTSSSSCEEE---EEEC--TTCHHHHHH--HHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCC
T ss_pred CeEEeCHHHHHHHHHhCCCeEEE---EEEC--CCCHHHHHH--HHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCC
Confidence 34566777888776433333333 3477 999999999 99999999876 35899999
Q ss_pred hhhhHHHHhhhHHHHH-HHhhccccc-ccchHHHHh-hHH-HHHHHhccccc
Q 025648 162 FLPTLLIFAQFTWRRL-IRNLKLGSL-LEHPRTYLN-RAI-QLFKTLNEPCK 209 (250)
Q Consensus 162 ~fPti~~f~~~~~~~~-~~~~~~~~~-~~~~~~y~g-r~~-~~~~~l~~~~~ 209 (250)
+|||+++|.+|..... .+....... ...+..|.| |.. .|.+|+.+..+
T Consensus 91 ~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~ 142 (298)
T 3ed3_A 91 GFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIR 142 (298)
T ss_dssp BSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCC
T ss_pred ccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcc
Confidence 9999999987641100 000000000 013567888 665 89999986664
No 266
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.25 E-value=4.5e-07 Score=74.31 Aligned_cols=45 Identities=9% Similarity=0.169 Sum_probs=37.9
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHH---HHHHHHcCCCCEEEEEcCCC
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSF---SVLSSLYSSIPHFAIEESAI 53 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~---e~la~~~~~~~~v~~~d~~~ 53 (250)
..+++++|+||++|||||+++.|.+ +++++.+++.+.+...+.+.
T Consensus 111 ~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~ 158 (197)
T 1un2_A 111 VAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNF 158 (197)
T ss_dssp CTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSS
T ss_pred CCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCc
Confidence 3467999999999999999999999 99999998766666666554
No 267
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=98.22 E-value=2.4e-06 Score=62.26 Aligned_cols=76 Identities=9% Similarity=0.077 Sum_probs=50.3
Q ss_pred CCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcC--CCChhH----HHhhCCCccCeEEEEeCceeEEEeCCC
Q 025648 11 HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES--AIRPSI----LSKYGVHGFPTLFLLNSSMRVRYHGSR 84 (250)
Q Consensus 11 ~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~--~~~~~l----~~~~~I~~~PTi~l~~g~~~~~~~G~~ 84 (250)
++..++.|+++|||+|+++.+.++++.-.|. .+.++.. +..+++ .+.+++.++|++++ +|+ ++.|+.
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~~i~y~---~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i-~~~---~~igg~ 92 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDLGVDFD---YVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII-NDE---KAIVGF 92 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHHTBCEE---EEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE-TTT---EEEESC
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCCcE---EEEeeccCcccHHHHHHHHHHhCCCCccCEEEE-CCC---EEEEcC
Confidence 3455778999999999999999998754331 2222110 011223 23468999999876 442 456778
Q ss_pred CHHHHHHHH
Q 025648 85 TLDSLVAFY 93 (250)
Q Consensus 85 ~~~~l~~fi 93 (250)
+.++|.++|
T Consensus 93 ~~~~l~~~L 101 (103)
T 3nzn_A 93 KEKEIRESL 101 (103)
T ss_dssp CHHHHHHHT
T ss_pred CHHHHHHHh
Confidence 888888765
No 268
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.21 E-value=1.5e-06 Score=73.01 Aligned_cols=87 Identities=9% Similarity=0.215 Sum_probs=64.3
Q ss_pred CCeEEEEEE-cCCChhHHhhhHHHHHHHHHcCC--CCEEEEE-c---------------------------CCCChhHHH
Q 025648 11 HEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIE-E---------------------------SAIRPSILS 59 (250)
Q Consensus 11 ~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~--~~~v~~~-d---------------------------~~~~~~l~~ 59 (250)
++++++.|| ++||+.|....|.+.++.++|.+ +..+++. | .|...++++
T Consensus 29 k~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~ 108 (233)
T 2v2g_A 29 NSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAV 108 (233)
T ss_dssp SSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHH
T ss_pred CCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHH
Confidence 348889998 99999999999999999888753 3333331 0 012346788
Q ss_pred hhCCC------------ccCeEEEE--eCceeEEEeC----CCCHHHHHHHHHHhh
Q 025648 60 KYGVH------------GFPTLFLL--NSSMRVRYHG----SRTLDSLVAFYSDVT 97 (250)
Q Consensus 60 ~~~I~------------~~PTi~l~--~g~~~~~~~G----~~~~~~l~~fi~~~~ 97 (250)
.||+. .+|+++++ +|+.+..+.+ .++.++|.+.|+.+.
T Consensus 109 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 109 KLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp HTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 89985 57999999 6777777654 467899999988764
No 269
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=98.21 E-value=2.4e-06 Score=69.48 Aligned_cols=33 Identities=15% Similarity=0.375 Sum_probs=29.6
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHH---HHHHHHcCC
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSF---SVLSSLYSS 42 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~---e~la~~~~~ 42 (250)
.+++++|.|+..|||+|+++.|.+ .++.+.+++
T Consensus 20 ~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~ 55 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE 55 (191)
T ss_dssp CSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT
T ss_pred CCCCeEEEEECCCChhHHHhChhccchHHHHHhCCC
Confidence 457899999999999999999986 699999985
No 270
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.19 E-value=3.5e-06 Score=67.00 Aligned_cols=88 Identities=10% Similarity=0.276 Sum_probs=57.9
Q ss_pred CCCeEEEEEEcCCCh-hHHhhhHHHHHHHHHcC----CCCEEEEE-cCCC-C----hhHHHhhC----------------
Q 025648 10 SHEYVAVLFYASWCP-FSRNFRPSFSVLSSLYS----SIPHFAIE-ESAI-R----PSILSKYG---------------- 62 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~-~C~~~~p~~e~la~~~~----~~~~v~~~-d~~~-~----~~l~~~~~---------------- 62 (250)
.+++++|.||++||+ .|....+.+.++.+.++ ++..+.+. |.+. . ++..++|+
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~~~~~~~~ltg~~~~~ 110 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTEDTSNWNLLTGYSLED 110 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCSCCTTEEEEBCSCHHH
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCCCCCCceecCcccHHH
Confidence 578999999999997 79999999988887763 24344431 2111 1 11222222
Q ss_pred --------------------CCccCeEEEE--eCceeEEEeCC--CCHHHHHHHHHHhh
Q 025648 63 --------------------VHGFPTLFLL--NSSMRVRYHGS--RTLDSLVAFYSDVT 97 (250)
Q Consensus 63 --------------------I~~~PTi~l~--~g~~~~~~~G~--~~~~~l~~fi~~~~ 97 (250)
|...|+++++ +|+.+..|.|. .+.++|.+-|++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 111 ITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRLA 169 (170)
T ss_dssp HHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHHh
Confidence 2224678888 78888888874 45688888777654
No 271
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.15 E-value=4.3e-06 Score=69.50 Aligned_cols=85 Identities=6% Similarity=0.115 Sum_probs=61.9
Q ss_pred eEEEEEEcCCChhHHhhhHHHHHHHHHcCC--CCEEEEE-c--------------------------CCCChhHHHhhCC
Q 025648 13 YVAVLFYASWCPFSRNFRPSFSVLSSLYSS--IPHFAIE-E--------------------------SAIRPSILSKYGV 63 (250)
Q Consensus 13 ~vlV~Fya~wC~~C~~~~p~~e~la~~~~~--~~~v~~~-d--------------------------~~~~~~l~~~~~I 63 (250)
.+|+.|+++||+.|....|.+.++.++|++ +..+++. | .|....+++.||+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv 113 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKI 113 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTC
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCC
Confidence 455556899999999999999999998864 3344431 1 0123468888998
Q ss_pred C------------ccCeEEEE--eCceeEEEeC----CCCHHHHHHHHHHhh
Q 025648 64 H------------GFPTLFLL--NSSMRVRYHG----SRTLDSLVAFYSDVT 97 (250)
Q Consensus 64 ~------------~~PTi~l~--~g~~~~~~~G----~~~~~~l~~fi~~~~ 97 (250)
. .+|+++++ +|+.+..+.+ .++.++|.+.|+.+.
T Consensus 114 ~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 114 MDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp EEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 4 47999999 6777776654 478999999988764
No 272
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.10 E-value=5e-06 Score=60.77 Aligned_cols=56 Identities=13% Similarity=0.290 Sum_probs=39.1
Q ss_pred EEEEEc-----CCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChh----HHHhhCCCccCeEEEEeCcee
Q 025648 15 AVLFYA-----SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPS----ILSKYGVHGFPTLFLLNSSMR 77 (250)
Q Consensus 15 lV~Fya-----~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~----l~~~~~I~~~PTi~l~~g~~~ 77 (250)
++.|++ +|||+|+++.+.++++. +. +...|.+.++. +...+|+.++|+++ ++|+.+
T Consensus 19 vvvf~~g~~~~~~C~~C~~~~~~L~~~~-----i~-~~~vdi~~~~~~~~~l~~~~g~~~vP~v~-i~g~~i 83 (105)
T 2yan_A 19 VMLFMKGNKQEAKCGFSKQILEILNSTG-----VE-YETFDILEDEEVRQGLKAYSNWPTYPQLY-VKGELV 83 (105)
T ss_dssp EEEEESBCSSSBCTTHHHHHHHHHHHHT-----CC-CEEEEGGGCHHHHHHHHHHHTCCSSCEEE-ETTEEE
T ss_pred EEEEEecCCCCCCCccHHHHHHHHHHCC-----CC-eEEEECCCCHHHHHHHHHHHCCCCCCeEE-ECCEEE
Confidence 334777 99999999999998873 22 23334444554 56678999999984 377643
No 273
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.07 E-value=1.2e-07 Score=69.82 Aligned_cols=85 Identities=12% Similarity=0.074 Sum_probs=59.3
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhh
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLP 164 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fP 164 (250)
+..++.++|++.+ . ...... .+++ +||++|+.+ .|.+.+++..+ ++.+|+|.++|
T Consensus 3 v~~l~~~~~~~~~-~-~~~~lv---~f~a--~wC~~C~~~--~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 73 (112)
T 2voc_A 3 IVKATDQSFSAET-S-EGVVLA---DFWA--PWCGPSKMI--APVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIP 73 (112)
T ss_dssp CEECCTTTHHHHH-S-SSEEEE---EEEC--TTBGGGGGH--HHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBS
T ss_pred eEEecHHHHHHHh-C-CCEEEE---EEEC--CCCHHHHHH--HHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCccc
Confidence 3456777887766 2 222222 3366 899999999 99999999887 34899999999
Q ss_pred hHHHHhhhHHHHHHHhhcccccccchHHHHh-hH-HHHHHHhccccc
Q 025648 165 TLLIFAQFTWRRLIRNLKLGSLLEHPRTYLN-RA-IQLFKTLNEPCK 209 (250)
Q Consensus 165 ti~~f~~~~~~~~~~~~~~~~~~~~~~~y~g-r~-~~~~~~l~~~~~ 209 (250)
|+++|.+|. ....+.| +. .++.++|+.+.+
T Consensus 74 t~~~~~~G~---------------~~~~~~G~~~~~~l~~~l~~~~~ 105 (112)
T 2voc_A 74 TLLVLKDGE---------------VVETSVGFKPKEALQELVNKHLL 105 (112)
T ss_dssp EEEEEETTE---------------EEEEEESCCCHHHHHHHHHTTSC
T ss_pred EEEEEeCCE---------------EEEEEeCCCCHHHHHHHHHHHHH
Confidence 999996544 2234555 33 377788875554
No 274
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=98.06 E-value=1.9e-05 Score=65.95 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=62.4
Q ss_pred CCCeEEEEEEcCC-ChhHH-----hhhHHHHHHHHHcCCCCEEEEE---------------------cCCC-ChhHHHhh
Q 025648 10 SHEYVAVLFYASW-CPFSR-----NFRPSFSVLSSLYSSIPHFAIE---------------------ESAI-RPSILSKY 61 (250)
Q Consensus 10 ~~~~vlV~Fya~w-C~~C~-----~~~p~~e~la~~~~~~~~v~~~---------------------d~~~-~~~l~~~~ 61 (250)
.+++++|.||+.| ||+|. ...+.|.++ |.++.++++. -+|. ..++++.|
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~vak~y 123 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WPHLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFHKRY 123 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CTTSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTHHHHT
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cCCCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHHHHHh
Confidence 4678999999988 99999 777777776 5665555542 0122 36788999
Q ss_pred CCCc---------cCeEEEE--eCceeEEEe-----CCCCHHHHHHHHHHhhC
Q 025648 62 GVHG---------FPTLFLL--NSSMRVRYH-----GSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 62 ~I~~---------~PTi~l~--~g~~~~~~~-----G~~~~~~l~~fi~~~~~ 98 (250)
||.. .|+++++ +|.....+. +..+.+++.+.|.....
T Consensus 124 Gv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~ 176 (224)
T 3keb_A 124 GVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGEQ 176 (224)
T ss_dssp TCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHHH
T ss_pred CCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhhh
Confidence 9975 7999999 566665544 24678999998887653
No 275
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.02 E-value=3.2e-06 Score=78.96 Aligned_cols=141 Identities=9% Similarity=0.066 Sum_probs=95.2
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE-eC-ceeEEEeCCCCHH
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL-NS-SMRVRYHGSRTLD 87 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~-~g-~~~~~~~G~~~~~ 87 (250)
-.+++.+.++.+.|..|.++...++++++.-+. +.+...+. .. ...|++.+. +| ..-.+|.|-..-.
T Consensus 17 ~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~s~~-i~~~~~~~--~~--------~~~p~~~~~~~~~~~~i~f~g~p~g~ 85 (521)
T 1hyu_A 17 LTKPVELIATLDDSAKSAEIKELLAEIAELSDK-VTFKEDNT--LP--------VRKPSFLITNPGSQQGPRFAGSPLGH 85 (521)
T ss_dssp CCSCEEEEEECCSSHHHHHHHHHHHHHHTTCTT-EEEEECTT--SS--------SCSSEEEEECTTCCCSCEEESCCCGG
T ss_pred CCCCEEEEEEeCCCcchHHHHHHHHHHHHhCCc-eEEEEcCC--cc--------cCCCEEEEecCCCcceEEEeccCcch
Confidence 346777777778899999999999999877654 33433221 10 568999998 44 3458999966666
Q ss_pred HHHHHHHHhhCC--CCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH------------
Q 025648 88 SLVAFYSDVTGM--NTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF------------ 153 (250)
Q Consensus 88 ~l~~fi~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f------------ 153 (250)
++..|+...+.. .+..++++.++.+...+... .+..+++ |||++|+.+ .|.+..+|..+
T Consensus 86 e~~s~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~---~i~~f~a--~~C~~C~~~--~~~l~~~a~~~~~v~~~~vd~~~ 158 (521)
T 1hyu_A 86 EFTSLVLALLWTGGHPSKEAQSLLEQIRDIDGDF---EFETYYS--LSCHNCPDV--VQALNLMAVLNPRIKHTAIDGGT 158 (521)
T ss_dssp GHHHHHHHHHHHTTCCCCSCHHHHHHHHHCCSCE---EEEEEEC--TTCSSHHHH--HHHHHHHHHHCTTEEEEEEETTT
T ss_pred hHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCc---ceEEEEC--CCCcCcHHH--HHHHHHHHhHcCceEEEEEechh
Confidence 666666654432 23345555555553222211 1223356 999999999 99999998876
Q ss_pred ---HHHHHHHHhhhhHHH
Q 025648 154 ---VLLRLVYIFLPTLLI 168 (250)
Q Consensus 154 ---~~~~~~i~~fPti~~ 168 (250)
+..+|+|.+.||+++
T Consensus 159 ~~~~~~~~~i~svPt~~i 176 (521)
T 1hyu_A 159 FQNEITERNVMGVPAVFV 176 (521)
T ss_dssp CHHHHHHTTCCSSSEEEE
T ss_pred hHHHHHHhCCCccCEEEE
Confidence 237899999999965
No 276
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=98.02 E-value=8.3e-06 Score=57.73 Aligned_cols=56 Identities=16% Similarity=0.417 Sum_probs=39.5
Q ss_pred EEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCCh----hHHHhhCCCccCeEEEEeCce
Q 025648 14 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKYGVHGFPTLFLLNSSM 76 (250)
Q Consensus 14 vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~----~l~~~~~I~~~PTi~l~~g~~ 76 (250)
.++.|+++||++|+++.+.+++. ++. +...|.+.++ ++.+.+++.++|+++ ++|+.
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~-----~i~-~~~~di~~~~~~~~~l~~~~~~~~vP~l~-~~g~~ 66 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK-----GAE-FNEIDASATPELRAEMQERSGRNTFPQIF-IGSVH 66 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-----TCC-CEEEESTTSHHHHHHHHHHHTSSCCCEEE-ETTEE
T ss_pred cEEEEECCCChhHHHHHHHHHHc-----CCC-cEEEECCCCHHHHHHHHHHhCCCCcCEEE-ECCEE
Confidence 37789999999999999998875 222 3333444443 455689999999763 37754
No 277
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.99 E-value=6.1e-06 Score=61.00 Aligned_cols=60 Identities=15% Similarity=0.337 Sum_probs=39.6
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCC-CC----hhHHHhhCCCccCeEEEEeCceeE
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA-IR----PSILSKYGVHGFPTLFLLNSSMRV 78 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~-~~----~~l~~~~~I~~~PTi~l~~g~~~~ 78 (250)
++.|+++|||+|++..+.++++.-.| ..+.++... .. ..+.+.+|+.++|+++ ++|+.+.
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~~i~~---~~~di~~~~~~~~~~~~~l~~~~g~~tvP~if-i~g~~ig 85 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRLGVQP---LVVELDQLGPQGPQLQKVLERLTGQHTVPNVF-VCGKHIG 85 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCC---EEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEE-ETTEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHcCCCC---eEEEeecCCCChHHHHHHHHHHhCCCCcCEEE-ECCEEEc
Confidence 67799999999999999998764332 223332210 11 2355667999999994 3776543
No 278
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.97 E-value=2.4e-07 Score=78.74 Aligned_cols=91 Identities=12% Similarity=0.078 Sum_probs=66.2
Q ss_pred CCCCCCCCCccccCCCCCcccccCCCCCC--CCCcCCCChhhhcCchHHHHHHHHH------------------------
Q 025648 100 NTASLDKISPDKVGKASNHEKHNNTEEES--CPFSWARSPENLLQQETYLALATAF------------------------ 153 (250)
Q Consensus 100 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~pw~~~ck~~~~~~~~~~lA~~f------------------------ 153 (250)
.+..+++.+|+.++.. ...+++ .+| + |||+ + .|.|+.+|..|
T Consensus 17 ~v~~Lt~~nF~~vi~~-~~~vlV---~Fy~~A--pWCg----l--~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~ 84 (248)
T 2c0g_A 17 GCVDLDELSFEKTVER-FPYSVV---KFDIAS--PYGE----K--HEAFTAFSKSAHKATKDLLIATVGVKDYGELENKA 84 (248)
T ss_dssp TCEECCTTTHHHHHTT-SSEEEE---EEEESS--CCSH----H--HHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHH
T ss_pred CcEECCHHHHHHHHhc-CCCEEE---EEECCC--CCCc----c--HHHHHHHHHHHhccCCCeEEEEEECCcccccccHH
Confidence 3556788999987643 233444 335 6 9998 8 99999999887
Q ss_pred HHHHHHHH--hhhhHHHHhhhHHHHHHHhhcccccccchHHH--Hh-hHH-HHHHHhcccccCCccccc
Q 025648 154 VLLRLVYI--FLPTLLIFAQFTWRRLIRNLKLGSLLEHPRTY--LN-RAI-QLFKTLNEPCKRSNLQEG 216 (250)
Q Consensus 154 ~~~~~~i~--~fPti~~f~~~~~~~~~~~~~~~~~~~~~~~y--~g-r~~-~~~~~l~~~~~t~~~~~g 216 (250)
++.+|+|. +||||++|+ |. . ..+..| .| |.. +|.+||++++++..-..|
T Consensus 85 la~~~~V~~~~~PTl~~F~-G~------------~-~~~~~y~~~G~~~~~~L~~fi~~~~~~~~~~~g 139 (248)
T 2c0g_A 85 LGDRYKVDDKNFPSIFLFK-GN------------A-DEYVQLPSHVDVTLDNLKAFVSANTPLYIGRDG 139 (248)
T ss_dssp HHHHTTCCTTSCCEEEEES-SS------------S-SSEEECCTTSCCCHHHHHHHHHHHSSCCCCCTT
T ss_pred HHHHhCCCcCCCCeEEEEe-CC------------c-CcceeecccCCCCHHHHHHHHHHhhccccCCCC
Confidence 23578999 999999998 65 1 135667 66 665 899999988876654444
No 279
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=97.96 E-value=2.7e-07 Score=68.46 Aligned_cols=86 Identities=16% Similarity=0.200 Sum_probs=59.2
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHHH-------------------HHHHHH
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFVL-------------------LRLVYI 161 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~~-------------------~~~~i~ 161 (250)
+..++.++|+..+......+++ .+++ |||++|+.+ .|.+.+++..+.. .+ +|.
T Consensus 9 v~~l~~~~f~~~v~~~~~~vlv---~f~a--~wC~~C~~~--~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~-~v~ 80 (121)
T 2djj_A 9 VTVVVAKNYNEIVLDDTKDVLI---EFYA--PWCGHCKAL--APKYEELGALYAKSEFKDRVVIAKVDATANDVPD-EIQ 80 (121)
T ss_dssp SEECCTTTTTTSSSCTTSCEEE---EEEC--SSCTTHHHH--HHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS-CCS
T ss_pred eEEecccCHHHHhhcCCCCEEE---EEEC--CCCHhHHHh--hHHHHHHHHHHhhcccCCceEEEEEECccccccc-ccC
Confidence 4456778888775333333333 3467 899999999 9999999988731 23 889
Q ss_pred hhhhHHHHhhhHHHHHHHhhccccccc-chHHHHh-hH-HHHHHHhcccc
Q 025648 162 FLPTLLIFAQFTWRRLIRNLKLGSLLE-HPRTYLN-RA-IQLFKTLNEPC 208 (250)
Q Consensus 162 ~fPti~~f~~~~~~~~~~~~~~~~~~~-~~~~y~g-r~-~~~~~~l~~~~ 208 (250)
++||+++|.+|. + ....|.| +. ..|.+||+++.
T Consensus 81 ~~Pt~~~~~~~~--------------~~~~~~~~G~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 81 GFPTIKLYPAGA--------------KGQPVTYSGSRTVEDLIKFIAENG 116 (121)
T ss_dssp SSSEEEEECSSC--------------TTSCCCCCCCSCHHHHHHHHHHTS
T ss_pred cCCeEEEEeCcC--------------CCCceEecCCCCHHHHHHHHHhcc
Confidence 999999998765 2 1344556 43 37778887554
No 280
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.96 E-value=1.4e-07 Score=70.79 Aligned_cols=82 Identities=16% Similarity=0.132 Sum_probs=58.7
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH-----------------HHHHHHHHhh
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF-----------------VLLRLVYIFL 163 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f-----------------~~~~~~i~~f 163 (250)
+..+++++|++++... +++ .+++ +||++|+.+ .|.+..++..+ ++.+|+|.++
T Consensus 9 v~~l~~~~f~~~~~~~---vlv---~f~a--~wC~~C~~~--~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~ 78 (126)
T 1x5e_A 9 VRVITDENWRELLEGD---WMI---EFYA--PWCPACQNL--QPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINAL 78 (126)
T ss_dssp EEECCTTTHHHHTSSE---EEE---EEEC--SSCHHHHHH--HHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSS
T ss_pred cEEecHHHHHHHhCCC---EEE---EEEC--CCCHHHHHH--hHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCccc
Confidence 3456778888765432 222 3466 899999999 99999999876 2488999999
Q ss_pred hhHHHHhhhHHHHHHHhhcccccccchHHHHh-hH-HHHHHHhcccc
Q 025648 164 PTLLIFAQFTWRRLIRNLKLGSLLEHPRTYLN-RA-IQLFKTLNEPC 208 (250)
Q Consensus 164 Pti~~f~~~~~~~~~~~~~~~~~~~~~~~y~g-r~-~~~~~~l~~~~ 208 (250)
||+++|.+|. ...|.| +. .++.++|++..
T Consensus 79 Pt~~~~~~G~----------------~~~~~G~~~~~~l~~~l~~~~ 109 (126)
T 1x5e_A 79 PTIYHCKDGE----------------FRRYQGPRTKKDFINFISDKE 109 (126)
T ss_dssp SEEEEEETTE----------------EEECCSCCCHHHHHHHHHTCG
T ss_pred CEEEEEeCCe----------------EEEeecCCCHHHHHHHHHHHh
Confidence 9999996544 234555 33 37788887543
No 281
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.92 E-value=6.4e-07 Score=76.78 Aligned_cols=67 Identities=13% Similarity=0.101 Sum_probs=52.0
Q ss_pred CCCCCCCCCccccCCCC-CcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHh
Q 025648 100 NTASLDKISPDKVGKAS-NHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIF 162 (250)
Q Consensus 100 ~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~ 162 (250)
.+..++.++|++++..+ ...+.+ .+|+ |||++|+.+ .|.+..++..+ ++.+|+|.+
T Consensus 8 ~v~~~~~~~f~~~~~~~~~~~v~v---~f~a--~wC~~C~~~--~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~ 80 (287)
T 3qou_A 8 NIVNINESNLQQVLEQSMTTPVLF---YFWS--ERSQHCLQL--TPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRA 80 (287)
T ss_dssp TEEECCTTTHHHHHTTTTTSCEEE---EEEC--TTCTTTTTT--HHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCS
T ss_pred ccEECCHHHHHHHHHhcCCCeEEE---EEEC--CCChHHHHH--HHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCC
Confidence 45577888998876543 222333 3477 999999999 99999999987 348999999
Q ss_pred hhhHHHHhhhH
Q 025648 163 LPTLLIFAQFT 173 (250)
Q Consensus 163 fPti~~f~~~~ 173 (250)
+||+++|.+|.
T Consensus 81 ~Pt~~~~~~G~ 91 (287)
T 3qou_A 81 IPTVYLFQNGQ 91 (287)
T ss_dssp SSEEEEEETTE
T ss_pred CCeEEEEECCE
Confidence 99999997763
No 282
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.89 E-value=6.8e-05 Score=60.37 Aligned_cols=90 Identities=12% Similarity=0.194 Sum_probs=62.0
Q ss_pred ccCCCeEEEEEEcCCChhHHhhhHHH---HHHHHHcC-CCCEEEEEcCC-C-------------ChhHHHh---hCCCcc
Q 025648 8 KNSHEYVAVLFYASWCPFSRNFRPSF---SVLSSLYS-SIPHFAIEESA-I-------------RPSILSK---YGVHGF 66 (250)
Q Consensus 8 ~~~~~~vlV~Fya~wC~~C~~~~p~~---e~la~~~~-~~~~v~~~d~~-~-------------~~~l~~~---~~I~~~ 66 (250)
.++.|+++|+++++||..|..+.... +++.+.+. +.+..+.+-.+ + ...++.. |+++++
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~ 131 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQF 131 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTC
T ss_pred hhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCC
Confidence 55789999999999999999986332 22333332 23444443222 1 1234443 899999
Q ss_pred CeEEEE--eC---ceeEEEeCCCCHHHHHHHHHHhh
Q 025648 67 PTLFLL--NS---SMRVRYHGSRTLDSLVAFYSDVT 97 (250)
Q Consensus 67 PTi~l~--~g---~~~~~~~G~~~~~~l~~fi~~~~ 97 (250)
|++.++ .+ +.+.+..|..++++|.+.+.+..
T Consensus 132 P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 132 PLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp SEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 999999 32 45788999999999998887654
No 283
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.89 E-value=2.1e-07 Score=70.16 Aligned_cols=66 Identities=24% Similarity=0.145 Sum_probs=49.2
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH--------------------HHHHHH
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV--------------------LLRLVY 160 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~--------------------~~~~~i 160 (250)
+..++.++|++.+......+++ .+++ +||++|+.+ .|.+..++..+. +.+|+|
T Consensus 9 v~~l~~~~~~~~~~~~~~~~lv---~f~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v 81 (133)
T 1x5d_A 9 VIELTDDSFDKNVLDSEDVWMV---EFYA--PWCGHCKNL--EPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGI 81 (133)
T ss_dssp CEECCTTHHHHHTTTSSSEEEE---EEEC--TTCHHHHTH--HHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTC
T ss_pred CEEcCHhhHHHHHhcCCCeEEE---EEEC--CCCHHHHhh--cHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCC
Confidence 4456777777665433323333 3466 899999999 999999998874 388999
Q ss_pred HhhhhHHHHhhhH
Q 025648 161 IFLPTLLIFAQFT 173 (250)
Q Consensus 161 ~~fPti~~f~~~~ 173 (250)
.++||+++|.+|.
T Consensus 82 ~~~Pt~~~~~~g~ 94 (133)
T 1x5d_A 82 RGFPTIKIFQKGE 94 (133)
T ss_dssp CSSSEEEEEETTE
T ss_pred CeeCeEEEEeCCC
Confidence 9999999998754
No 284
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.11 E-value=1.7e-06 Score=61.92 Aligned_cols=65 Identities=14% Similarity=0.116 Sum_probs=44.1
Q ss_pred CCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhhh
Q 025648 102 ASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPT 165 (250)
Q Consensus 102 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fPt 165 (250)
..++.++++..+......... .++. +||++|+.+ .|.+..++..+ ++.+|+|.++||
T Consensus 4 ~~l~~~~~~~~~~~~~~~~~v---~f~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt 76 (106)
T 2yj7_A 4 IEVTDENFEQEVLKSDKPVLV---DFWA--PWCGPCRMI--APIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPT 76 (106)
Confidence 345666666544322222222 3355 899999999 88888777655 238899999999
Q ss_pred HHHHhhhH
Q 025648 166 LLIFAQFT 173 (250)
Q Consensus 166 i~~f~~~~ 173 (250)
+++|.+|.
T Consensus 77 ~~~~~~g~ 84 (106)
T 2yj7_A 77 LLLFKNGQ 84 (106)
Confidence 99996655
No 285
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.86 E-value=5e-07 Score=69.81 Aligned_cols=64 Identities=16% Similarity=0.054 Sum_probs=51.4
Q ss_pred CCCCCCccccCCCCCcccccCCCCCCCCCcCC--CChhhhcCchHHHHHHHHHH----------------HHHHHHHhhh
Q 025648 103 SLDKISPDKVGKASNHEKHNNTEEESCPFSWA--RSPENLLQQETYLALATAFV----------------LLRLVYIFLP 164 (250)
Q Consensus 103 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~--~~ck~~~~~~~~~~lA~~f~----------------~~~~~i~~fP 164 (250)
.+++++|++.+......+++ .+|+ +|| |+|+.+ .|..++||..|- ..+|+|++.|
T Consensus 19 ~vt~~~F~~~v~~~~~~vlV---dF~A--~wCr~gpCk~i--aPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siP 91 (137)
T 2qsi_A 19 LVDEATVDDFIAHSGKIVVL---FFRG--DAVRFPEAADL--AVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCP 91 (137)
T ss_dssp EECTTTHHHHHHTSSSEEEE---EECC--CTTTCTTHHHH--HHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSS
T ss_pred ccCHhHHHHHHhcCCCcEEE---EEeC--CccCCCchhhH--HhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCC
Confidence 67788998876443323444 3467 799 999999 999999999983 3999999999
Q ss_pred hHHHHhhhH
Q 025648 165 TLLIFAQFT 173 (250)
Q Consensus 165 ti~~f~~~~ 173 (250)
|+++|.+|.
T Consensus 92 TlilFkdG~ 100 (137)
T 2qsi_A 92 SLAVVQPER 100 (137)
T ss_dssp EEEEEECCE
T ss_pred EEEEEECCE
Confidence 999999876
No 286
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.86 E-value=4.7e-05 Score=64.21 Aligned_cols=98 Identities=9% Similarity=-0.027 Sum_probs=79.2
Q ss_pred cC-CCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEe--------CceeEE
Q 025648 9 NS-HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLN--------SSMRVR 79 (250)
Q Consensus 9 ~~-~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~--------g~~~~~ 79 (250)
+. +++++|-|++++| ....+.|.++|+.+.+...++.. .+++++.+|++.+ |++++|. ......
T Consensus 22 ~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t---~~~~v~~~~~v~~-p~ivlfk~~~~~~kfde~~~~ 94 (250)
T 3ec3_A 22 KDGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHT---FSTEIAKFLKVSL-GKLVLMQPEKFQSKYEPRMHV 94 (250)
T ss_dssp HHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEE---CCHHHHHHHTCCS-SEEEEECCGGGCCTTSCSCEE
T ss_pred hcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEE---CcHHHHHHcCCCC-CeEEEEecchhhcccccccee
Confidence 44 7899999999985 57788999999999765556554 3578899999998 9999993 245678
Q ss_pred Ee--CCCCHHHHHHHHHHhhCCCCCCCCCCCccccC
Q 025648 80 YH--GSRTLDSLVAFYSDVTGMNTASLDKISPDKVG 113 (250)
Q Consensus 80 ~~--G~~~~~~l~~fi~~~~~~~~~~l~~~~~~~~~ 113 (250)
|. |..+.++|.+||....-+-+.+++.++...+.
T Consensus 95 y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~ 130 (250)
T 3ec3_A 95 MDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRY 130 (250)
T ss_dssp EECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHS
T ss_pred ccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhh
Confidence 88 47899999999999988888888888876544
No 287
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.84 E-value=9e-08 Score=73.15 Aligned_cols=70 Identities=11% Similarity=0.114 Sum_probs=52.0
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhhhHHHH-hhhHHHHHHHhhcccccccc
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTLLIF-AQFTWRRLIRNLKLGSLLEH 189 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fPti~~f-~~~~~~~~~~~~~~~~~~~~ 189 (250)
+++ +||++|+.+ .|.+..++..| ++.+|+|.++||+++| .+|.
T Consensus 45 f~a--~wC~~C~~~--~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~G~---------------- 104 (136)
T 2l5l_A 45 FYA--DWCGPCKMV--APILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGK---------------- 104 (136)
T ss_dssp EEC--TTSHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSCEEEEECSSSC----------------
T ss_pred EEC--CcCHHHHHH--HHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHcCCCCCCEEEEECCCCc----------------
Confidence 366 899999999 99999999876 3488999999999999 5554
Q ss_pred hHHHHh-hH-HHHHHHhcccccCCccccc
Q 025648 190 PRTYLN-RA-IQLFKTLNEPCKRSNLQEG 216 (250)
Q Consensus 190 ~~~y~g-r~-~~~~~~l~~~~~t~~~~~g 216 (250)
...|.| +. .++.++|++..+..+-++|
T Consensus 105 ~~~~~G~~~~~~l~~~l~~~~~~~~~~~~ 133 (136)
T 2l5l_A 105 PEMAQGAMPKASFKKAIDEFLLKKEGHHH 133 (136)
T ss_dssp CEEEESCCCHHHHHHHHHHHHTSCTTSSC
T ss_pred EEEEeCCCCHHHHHHHHHHHhhccCCCCC
Confidence 123444 22 3777888877766655555
No 288
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.81 E-value=3.5e-07 Score=76.85 Aligned_cols=66 Identities=23% Similarity=0.150 Sum_probs=50.7
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH---------------------HHHHHH
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------------VLLRLV 159 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------------~~~~~~ 159 (250)
+..++.++++..+......+.+ .+|+ +||++|+++ .|.+..+|..+ ++.+|+
T Consensus 14 v~~l~~~~f~~~i~~~~~~vlv---~F~a--~wC~~C~~~--~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~ 86 (244)
T 3q6o_A 14 LTLLQADTVRGAVLGSRSAWAV---EFFA--SWCGHCIAF--APTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFN 86 (244)
T ss_dssp SEEECTTTHHHHHSSCSSEEEE---EEEC--TTCHHHHHH--HHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTT
T ss_pred ceeCChhhHHHHHhhCCCeEEE---EEEC--CcCHHHHHH--HHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcC
Confidence 4456778888765544333333 3467 899999999 99999999876 348899
Q ss_pred HHhhhhHHHHhhhH
Q 025648 160 YIFLPTLLIFAQFT 173 (250)
Q Consensus 160 i~~fPti~~f~~~~ 173 (250)
|.++||+++|.+|.
T Consensus 87 v~~~Pt~~~~~~g~ 100 (244)
T 3q6o_A 87 IPGFPTVRFFXAFT 100 (244)
T ss_dssp CCSSSEEEEECTTC
T ss_pred CCccCEEEEEeCCC
Confidence 99999999998754
No 289
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.81 E-value=9.7e-08 Score=69.51 Aligned_cols=66 Identities=17% Similarity=0.122 Sum_probs=49.8
Q ss_pred CCCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH-------------------HHHHHH
Q 025648 99 MNTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF-------------------VLLRLV 159 (250)
Q Consensus 99 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f-------------------~~~~~~ 159 (250)
..+..+++++|++.+.. . .... .+++ +||++|+.+ .|.+..++..+ ++.+|+
T Consensus 5 ~~v~~l~~~~~~~~~~~-~-~~lv---~f~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~ 75 (111)
T 3uvt_A 5 STVLALTENNFDDTIAE-G-ITFI---KFYA--PWCGHCKTL--APTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYS 75 (111)
T ss_dssp CCSEECCTTTHHHHHHS-S-EEEE---EEEC--SSCHHHHHH--HHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTT
T ss_pred CcceEcChhhHHHHhcC-C-cEEE---EEEC--CCChhHHHh--hHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcC
Confidence 34556788888877652 2 2222 3466 899999999 99999999764 348999
Q ss_pred HHhhhhHHHHhhhH
Q 025648 160 YIFLPTLLIFAQFT 173 (250)
Q Consensus 160 i~~fPti~~f~~~~ 173 (250)
|.++||+++|.+|.
T Consensus 76 v~~~Pt~~~~~~g~ 89 (111)
T 3uvt_A 76 VRGYPTLLLFRGGK 89 (111)
T ss_dssp CCSSSEEEEEETTE
T ss_pred CCcccEEEEEeCCc
Confidence 99999999997665
No 290
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.80 E-value=0.00017 Score=58.99 Aligned_cols=41 Identities=12% Similarity=0.213 Sum_probs=33.1
Q ss_pred hHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHHHhhCCC
Q 025648 56 SILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVTGMN 100 (250)
Q Consensus 56 ~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~~~~~~~ 100 (250)
.++.++||+++||+++ ||+. +.|..+.+.|.+.|++.+..+
T Consensus 154 ~~a~~~gV~gtPtfvv-nG~~---~~G~~~~e~l~~~i~~~~~~~ 194 (202)
T 3gha_A 154 DLNQKMNIQATPTIYV-NDKV---IKNFADYDEIKETIEKELKGK 194 (202)
T ss_dssp HHHHHTTCCSSCEEEE-TTEE---CSCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCcCCEEEE-CCEE---ecCCCCHHHHHHHHHHHHHhh
Confidence 4566789999999988 7764 568899999999999876543
No 291
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.80 E-value=3.2e-07 Score=69.93 Aligned_cols=83 Identities=14% Similarity=0.134 Sum_probs=56.4
Q ss_pred CCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH-------------------HHHHHHHh
Q 025648 102 ASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV-------------------LLRLVYIF 162 (250)
Q Consensus 102 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~-------------------~~~~~i~~ 162 (250)
..++.++|+..+.... .+++ .+++ +||++|+.+ .|.+..++..+. +.+|+|.+
T Consensus 20 ~~l~~~~~~~~~~~~~-~vlv---~f~a--~wC~~C~~~--~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~ 91 (140)
T 2dj1_A 20 WVLNDGNFDNFVADKD-TVLL---EFYA--PWCGHCKQF--APEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSG 91 (140)
T ss_dssp EECCTTTHHHHHTTCS-EEEE---EECC--TTCHHHHTT--HHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCS
T ss_pred EEcChHhHHHHHhcCC-eEEE---EEEC--CCCHHHHHh--hHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCc
Confidence 3456667776654322 2222 3466 899999999 999999988762 48899999
Q ss_pred hhhHHHHhhhHHHHHHHhhcccccccchHHHHh-hH-HHHHHHhcccc
Q 025648 163 LPTLLIFAQFTWRRLIRNLKLGSLLEHPRTYLN-RA-IQLFKTLNEPC 208 (250)
Q Consensus 163 fPti~~f~~~~~~~~~~~~~~~~~~~~~~~y~g-r~-~~~~~~l~~~~ 208 (250)
+||+++|.+|. ...|.| +. .+|.+||+++.
T Consensus 92 ~Pt~~~~~~G~----------------~~~~~g~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 92 YPTIKILKKGQ----------------AVDYDGSRTQEEIVAKVREVS 123 (140)
T ss_dssp SSEEEEEETTE----------------EEECCSCCCHHHHHHHHHHHH
T ss_pred cCeEEEEECCc----------------EEEcCCCCCHHHHHHHHHHhc
Confidence 99999996543 234445 33 36777777544
No 292
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.79 E-value=3.1e-07 Score=70.12 Aligned_cols=43 Identities=9% Similarity=0.123 Sum_probs=36.8
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ +||++|+.+ .|.+..++..| ++.+|+|.++||+++|.++.
T Consensus 58 f~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~~g 116 (141)
T 3hxs_A 58 FYA--DWCGPCKMV--APILEELSKEYAGKIYIYKVNVDKEPELARDFGIQSIPTIWFVPMKG 116 (141)
T ss_dssp EEC--TTCTTHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEECSSS
T ss_pred EEC--CCCHHHHHH--HHHHHHHHHHhcCceEEEEEECCCCHHHHHHcCCCCcCEEEEEeCCC
Confidence 466 899999999 99999999887 34899999999999995443
No 293
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.79 E-value=6e-07 Score=75.93 Aligned_cols=86 Identities=15% Similarity=0.174 Sum_probs=62.1
Q ss_pred CCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH-----------------------HHH
Q 025648 100 NTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF-----------------------VLL 156 (250)
Q Consensus 100 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f-----------------------~~~ 156 (250)
.+..+++.+|+.++.. ...+++.| |+..|||+ + .|.|+.+|..| ++.
T Consensus 6 ~v~~Lt~~nF~~~i~~-~~~vlV~F---yA~~pWCg----l--~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~ 75 (240)
T 2qc7_A 6 GALPLDTVTFYKVIPK-SKFVLVKF---DTQYPYGE----K--QDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSE 75 (240)
T ss_dssp TCEECCTTHHHHHGGG-CSEEEEEE---CCSSCCSH----H--HHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHH
T ss_pred CceECCHHHHHHHHcC-CCCEEEEE---eCCCCCCc----c--hHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHH
Confidence 3456788889887643 22344433 43348998 8 99999999886 347
Q ss_pred HHHHH--hhhhHHHHhhhHHHHHHHhhcccccccchHHHHh-hHH-HHHHHhcccc
Q 025648 157 RLVYI--FLPTLLIFAQFTWRRLIRNLKLGSLLEHPRTYLN-RAI-QLFKTLNEPC 208 (250)
Q Consensus 157 ~~~i~--~fPti~~f~~~~~~~~~~~~~~~~~~~~~~~y~g-r~~-~~~~~l~~~~ 208 (250)
+|+|. +|||+++|++|. . +.+..|.| |.. .|.+||++++
T Consensus 76 ~~~V~~~~~PTl~~f~~G~------------~-~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 76 KYKLDKESYPVFYLFRDGD------------F-ENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp HTTCCGGGCSEEEEEETTC------------S-SCCEECCSCSCHHHHHHHHHHTT
T ss_pred HcCCCCCCCCEEEEEeCCC------------c-CcceeecCCCCHHHHHHHHHHhc
Confidence 89999 999999998765 0 13567777 655 8889998776
No 294
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.78 E-value=5.2e-07 Score=66.76 Aligned_cols=67 Identities=16% Similarity=0.131 Sum_probs=48.7
Q ss_pred CCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhh
Q 025648 100 NTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFL 163 (250)
Q Consensus 100 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~f 163 (250)
.+..++.++++..+......... .+++ +||++|+.+ .|.+..++..+ ++.+|+|.++
T Consensus 13 ~v~~l~~~~~~~~~~~~~~~~lv---~f~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~ 85 (121)
T 2i1u_A 13 ATIKVTDASFATDVLSSNKPVLV---DFWA--TWCGPCKMV--APVLEEIATERATDLTVAKLDVDTNPETARNFQVVSI 85 (121)
T ss_dssp CSEECCTTTHHHHTTTCSSCEEE---EEEC--TTCHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSS
T ss_pred cceecCHHHHHHHHHhCCCcEEE---EEEC--CCCHHHHHH--HHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcC
Confidence 44567777777544332322222 3356 899999999 99999999876 3488999999
Q ss_pred hhHHHHhhhH
Q 025648 164 PTLLIFAQFT 173 (250)
Q Consensus 164 Pti~~f~~~~ 173 (250)
||+++|.+|.
T Consensus 86 Pt~~~~~~g~ 95 (121)
T 2i1u_A 86 PTLILFKDGQ 95 (121)
T ss_dssp SEEEEEETTE
T ss_pred CEEEEEECCE
Confidence 9999997654
No 295
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.76 E-value=1.4e-06 Score=65.69 Aligned_cols=44 Identities=14% Similarity=0.182 Sum_probs=37.6
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhhhHHHHhhhH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fPti~~f~~~~ 173 (250)
.+++ +||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 48 ~F~a--~wC~~C~~~--~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~ 107 (128)
T 3ul3_B 48 YFFA--KWCQACTMQ--STEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKT 107 (128)
T ss_dssp EEEC--TTCHHHHHH--HHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTE
T ss_pred EEEC--CCCHHHHHH--hHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCE
Confidence 3466 899999999 99999999987 24889999999999996654
No 296
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.76 E-value=6.7e-06 Score=62.70 Aligned_cols=59 Identities=14% Similarity=0.251 Sum_probs=40.2
Q ss_pred EEEEEcCCChhHHhh-hHHHHHHHHHcCCCCEEEEEcCCCC-------hhHHHhhCCCccCeEEEEeCcee
Q 025648 15 AVLFYASWCPFSRNF-RPSFSVLSSLYSSIPHFAIEESAIR-------PSILSKYGVHGFPTLFLLNSSMR 77 (250)
Q Consensus 15 lV~Fya~wC~~C~~~-~p~~e~la~~~~~~~~v~~~d~~~~-------~~l~~~~~I~~~PTi~l~~g~~~ 77 (250)
++.|+++|||+|++. .+.++++.... ..+...+.+.. ..+.+.+|+.++|+++ ++|+.+
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~~~~~---i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~vf-i~g~~i 105 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQELNVPK---SKALVLELDEMSNGSEIQDALEEISGQKTVPNVY-INGKHI 105 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTSCCCG---GGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEE-ETTEEE
T ss_pred EEEEECCCCCchHHHHHHHHHhcCccC---CCcEEEEccccCCHHHHHHHHHHHhCCCCCCEEE-ECCEEE
Confidence 678999999999999 88887654211 12233333222 4688889999999973 377654
No 297
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.73 E-value=9.9e-07 Score=68.47 Aligned_cols=68 Identities=13% Similarity=0.002 Sum_probs=38.4
Q ss_pred CCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH-----------------HHHHHHHHh
Q 025648 100 NTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF-----------------VLLRLVYIF 162 (250)
Q Consensus 100 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f-----------------~~~~~~i~~ 162 (250)
....++.++|++++..... ..+.| ++.-+||++|+.+ .|.++++|..| +..+|+|.+
T Consensus 18 ~~~~l~~~~f~~~i~~~~~-~vv~f---~~~~~~C~~C~~l--~P~l~~la~~~~~v~~~~~~Vd~d~~~~la~~~~V~~ 91 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGD-GVILL---SSDPRRTPEVSDN--PVMIAELLREFPQFDWQVAVADLEQSEAIGDRFNVRR 91 (142)
T ss_dssp TCEECCCC--------CCS-EEEEE---CCCSCC----CCH--HHHHHHHHHTCTTSCCEEEEECHHHHHHHHHTTTCCS
T ss_pred cCcccccccHHHHHHhCCC-EEEEE---ECCCCCCccHHHH--HHHHHHHHHHhcccceeEEEEECCCCHHHHHhcCCCc
Confidence 4557788899988764332 33322 2311369999999 99999999864 237899999
Q ss_pred hhhHHHHhhhH
Q 025648 163 LPTLLIFAQFT 173 (250)
Q Consensus 163 fPti~~f~~~~ 173 (250)
+||+++|.+|.
T Consensus 92 iPT~~~fk~G~ 102 (142)
T 2es7_A 92 FPATLVFTDGK 102 (142)
T ss_dssp SSEEEEESCC-
T ss_pred CCeEEEEeCCE
Confidence 99999997665
No 298
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.73 E-value=5.3e-07 Score=69.91 Aligned_cols=65 Identities=12% Similarity=-0.053 Sum_probs=50.3
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcC--CCChhhhcCchHHHHHHHHHH-----------------HHHHHHH
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSW--ARSPENLLQQETYLALATAFV-----------------LLRLVYI 161 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw--~~~ck~~~~~~~~~~lA~~f~-----------------~~~~~i~ 161 (250)
...+++++|++.+. ....++++ ++| +| ||+|+.+ .|..++||..|- ..+|+|+
T Consensus 19 ~~~~t~~~F~~~v~-~~~~vlVd---F~a--~~crCgpCk~i--aPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~ 90 (140)
T 2qgv_A 19 WTPVSESRLDDWLT-QAPDGVVL---LSS--DPKRTPEVSDN--PVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAF 90 (140)
T ss_dssp CEECCHHHHHHHHH-TCSSEEEE---ECC--CTTTCTTTTHH--HHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCC
T ss_pred CccCCHHHHHHHHh-CCCCEEEE---EeC--CcccCCcHHHH--HhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCc
Confidence 34677788887764 23334443 356 67 8999999 999999998872 2899999
Q ss_pred hhhhHHHHhhhH
Q 025648 162 FLPTLLIFAQFT 173 (250)
Q Consensus 162 ~fPti~~f~~~~ 173 (250)
+.||+++|.+|.
T Consensus 91 sIPTlilFk~G~ 102 (140)
T 2qgv_A 91 RFPATLVFTGGN 102 (140)
T ss_dssp SSSEEEEEETTE
T ss_pred cCCEEEEEECCE
Confidence 999999999876
No 299
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.72 E-value=1.3e-06 Score=62.90 Aligned_cols=66 Identities=12% Similarity=0.102 Sum_probs=50.1
Q ss_pred CCCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHh
Q 025648 99 MNTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIF 162 (250)
Q Consensus 99 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~ 162 (250)
..+..+++++++..+ ....... .+++ +||++|+.+ .|.+..++..+ ++.+|+|.+
T Consensus 3 ~~v~~l~~~~~~~~~--~~~~~lv---~f~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 73 (106)
T 3die_A 3 MAIVKVTDADFDSKV--ESGVQLV---DFWA--TACGPCKMI--APVLEELAADYEGKADILKLDVDENPSTAAKYEVMS 73 (106)
T ss_dssp CCCEECCTTTHHHHS--CSSEEEE---EEEC--SBCHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCS
T ss_pred cceEECCHHHHHHHh--cCCcEEE---EEEC--CCCHHHHHH--hHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcc
Confidence 345567888888777 2222222 3356 899999999 99999999886 348999999
Q ss_pred hhhHHHHhhhH
Q 025648 163 LPTLLIFAQFT 173 (250)
Q Consensus 163 fPti~~f~~~~ 173 (250)
+||+++|.+|.
T Consensus 74 ~Pt~~~~~~G~ 84 (106)
T 3die_A 74 IPTLIVFKDGQ 84 (106)
T ss_dssp BSEEEEEETTE
T ss_pred cCEEEEEeCCe
Confidence 99999997664
No 300
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.72 E-value=1.5e-06 Score=63.52 Aligned_cols=69 Identities=7% Similarity=-0.006 Sum_probs=49.1
Q ss_pred CCCCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHH
Q 025648 98 GMNTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYI 161 (250)
Q Consensus 98 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~ 161 (250)
+..+..++.++|+..+......... .+++ +||++|+.+ .|.+..++..+ ++.+|+|.
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv---~f~~--~~C~~C~~~--~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~ 78 (115)
T 1thx_A 6 SKGVITITDAEFESEVLKAEQPVLV---YFWA--SWCGPCQLM--SPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVE 78 (115)
T ss_dssp CCSEEECCGGGHHHHTTTCSSCEEE---EEEC--TTCTTHHHH--HHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCC
T ss_pred cCceEEeeccchhhHhhcCCceEEE---EEEC--CCCHHHHHh--HHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCC
Confidence 3345566777777554322222222 3356 899999999 99999999876 34889999
Q ss_pred hhhhHHHHhhhH
Q 025648 162 FLPTLLIFAQFT 173 (250)
Q Consensus 162 ~fPti~~f~~~~ 173 (250)
++||+++|.+|.
T Consensus 79 ~~Pt~~~~~~G~ 90 (115)
T 1thx_A 79 GVPALRLVKGEQ 90 (115)
T ss_dssp SSSEEEEEETTE
T ss_pred ceeEEEEEcCCE
Confidence 999999996654
No 301
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.72 E-value=1.6e-06 Score=65.28 Aligned_cols=66 Identities=12% Similarity=0.083 Sum_probs=50.0
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH------------------HHHHHHHh
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV------------------LLRLVYIF 162 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~------------------~~~~~i~~ 162 (250)
+..++.++|+..+......+++ .+++ |||++|+.+ .|.+..++..+. +.+|+|.+
T Consensus 9 v~~l~~~~~~~~~~~~~~~vlv---~f~a--~wC~~C~~~--~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~ 81 (133)
T 2dj3_A 9 VKVVVGKTFDAIVMDPKKDVLI---EFYA--PWCGHCKQL--EPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEG 81 (133)
T ss_dssp SEECCTTTCCCCCTCTTSEEEE---EECC--TTCSHHHHH--HHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSS
T ss_pred eEEEcCCCHHHHhccCCCcEEE---EEEC--CCChhHHHH--HHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCc
Confidence 4567778888776543333333 3466 899999999 999999998873 26799999
Q ss_pred hhhHHHHhhhH
Q 025648 163 LPTLLIFAQFT 173 (250)
Q Consensus 163 fPti~~f~~~~ 173 (250)
+||+++|.+|.
T Consensus 82 ~Pt~~~~~~g~ 92 (133)
T 2dj3_A 82 FPTIYFAPSGD 92 (133)
T ss_dssp SSEEEEECTTC
T ss_pred CCEEEEEeCCC
Confidence 99999998765
No 302
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.72 E-value=1.3e-06 Score=63.29 Aligned_cols=61 Identities=8% Similarity=-0.102 Sum_probs=38.5
Q ss_pred CCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHH
Q 025648 105 DKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIF 169 (250)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f 169 (250)
+.+++++.+.... .+.. .+++ |||++|+.+ .|.+..++..| ++.+|+|.++||+++|
T Consensus 7 ~~~~~~~~~~~~~-~vlv---~f~a--~wC~~C~~~--~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 78 (105)
T 4euy_A 7 TIEELATYIEEQQ-LVLL---FIKT--ENCGVCDVM--LRKVNYVLENYNYVEKIEILLQDMQEIAGRYAVFTGPTVLLF 78 (105)
T ss_dssp ---CCSSSTTCSS-EEEE---EEEE--SSCHHHHHH--HHHHHHHHHTCTTEEEEEEEECCC---------CCCCEEEEE
T ss_pred CHHHHHHHHhcCC-CEEE---EEeC--CCCcchHHH--HHHHHHHHHHcCCceEEEEECCCCHHHHHhcCCCCCCEEEEE
Confidence 3456666653322 2222 3466 899999999 99999999876 3489999999999999
Q ss_pred hhhH
Q 025648 170 AQFT 173 (250)
Q Consensus 170 ~~~~ 173 (250)
.+|.
T Consensus 79 ~~G~ 82 (105)
T 4euy_A 79 YNGK 82 (105)
T ss_dssp ETTE
T ss_pred eCCe
Confidence 7665
No 303
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.71 E-value=5.1e-07 Score=65.67 Aligned_cols=66 Identities=12% Similarity=0.051 Sum_probs=47.4
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhh
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLP 164 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fP 164 (250)
+..++.++|+..+......+.. .+++ +||++|+.+ .|.+..++..+ ++.+|+|.++|
T Consensus 6 v~~l~~~~~~~~~~~~~~~vlv---~f~a--~~C~~C~~~--~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 78 (111)
T 3gnj_A 6 LEKLDTNTFEQLIYDEGKACLV---MFSR--KNCHVCQKV--TPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVP 78 (111)
T ss_dssp SEECCHHHHHHHHTTSCCCEEE---EEEC--SSCHHHHHH--HHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSC
T ss_pred ceecCHHHHHHHHHhcCCEEEE---EEeC--CCChhHHHH--HHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCC
Confidence 3445556666655322222222 3366 899999999 99999999886 34899999999
Q ss_pred hHHHHhhhH
Q 025648 165 TLLIFAQFT 173 (250)
Q Consensus 165 ti~~f~~~~ 173 (250)
|+++|.+|.
T Consensus 79 t~~~~~~g~ 87 (111)
T 3gnj_A 79 QILYFKDGE 87 (111)
T ss_dssp EEEEEETTE
T ss_pred EEEEEECCE
Confidence 999997665
No 304
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=97.71 E-value=0.00032 Score=58.45 Aligned_cols=45 Identities=18% Similarity=0.360 Sum_probs=33.7
Q ss_pred hHHHh-hCCCccCeEEEE--eCcee-----EEEeCCCCHHHHHHHHHHhhCCC
Q 025648 56 SILSK-YGVHGFPTLFLL--NSSMR-----VRYHGSRTLDSLVAFYSDVTGMN 100 (250)
Q Consensus 56 ~l~~~-~~I~~~PTi~l~--~g~~~-----~~~~G~~~~~~l~~fi~~~~~~~ 100 (250)
.++.+ +||+|+||+++. ||+.+ ....|..+.+.|.+.|++.++..
T Consensus 161 ~~a~~~~GV~GtPtfvv~~~nG~~~~Ga~~~~~~G~~~~e~l~~~I~~~l~~~ 213 (226)
T 3f4s_A 161 SLAINKLGITAVPIFFIKLNDDKSYIEHNKVKHGGYKELKYFTNVIDKLYGKA 213 (226)
T ss_dssp HHHHHHHCCCSSCEEEEEECCTTCCCCGGGGEEESCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCCEEEEEcCCCEEeeCCCCcccccccCHHHHHHHHHHHHhcC
Confidence 45667 999999999997 66543 24456666999999999887543
No 305
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=97.71 E-value=5.4e-07 Score=67.82 Aligned_cols=65 Identities=11% Similarity=-0.090 Sum_probs=48.3
Q ss_pred CCCCCCCccccCCCCCc--ccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHHH------------HHHHHHhhhhHH
Q 025648 102 ASLDKISPDKVGKASNH--EKHNNTEEESCPFSWARSPENLLQQETYLALATAFVL------------LRLVYIFLPTLL 167 (250)
Q Consensus 102 ~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~~------------~~~~i~~fPti~ 167 (250)
.+++.++|.+.+..... .+.+ .+|+ |||++|+.| .|.++.||..|-. .+|+|++.||++
T Consensus 6 ~~it~~~f~~~v~~~~~~~~vvv---~F~a--~wc~~C~~~--~p~l~~la~~~~~v~f~kvd~d~~~~~~~v~~~PT~~ 78 (118)
T 3evi_A 6 REISGNQYVNEVTNAEEDVWVII---HLYR--SSIPMCLLV--NQHLSLLARKFPETKFVKAIVNSCIQHYHDNCLPTIF 78 (118)
T ss_dssp EECCGGGHHHHTTTCCTTCEEEE---EEEC--TTSHHHHHH--HHHHHHHHHHCTTSEEEEEEGGGTSTTCCGGGCSEEE
T ss_pred EEeCHHHHHHHHHhcCCCCeEEE---EEeC--CCChHHHHH--HHHHHHHHHHCCCCEEEEEEhHHhHHHCCCCCCCEEE
Confidence 34566666655443332 2222 3477 999999999 9999999998731 689999999999
Q ss_pred HHhhhH
Q 025648 168 IFAQFT 173 (250)
Q Consensus 168 ~f~~~~ 173 (250)
+|.+|.
T Consensus 79 ~fk~G~ 84 (118)
T 3evi_A 79 VYKNGQ 84 (118)
T ss_dssp EEETTE
T ss_pred EEECCE
Confidence 999886
No 306
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.68 E-value=1.4e-06 Score=63.09 Aligned_cols=66 Identities=15% Similarity=0.086 Sum_probs=47.9
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhh
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLP 164 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fP 164 (250)
+..++.++|+..+......... .+++ +||++|+.+ .|.+..++..+ ++.+|+|.++|
T Consensus 4 v~~l~~~~f~~~~~~~~~~~~v---~f~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~P 76 (108)
T 2trx_A 4 IIHLTDDSFDTDVLKADGAILV---DFWA--EWCGPCKMI--APILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIP 76 (108)
T ss_dssp EEECCTTTHHHHTTTCSSEEEE---EEEC--TTCHHHHHH--HHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSS
T ss_pred ceecchhhHHHHHHhcCCeEEE---EEEC--CCCHhHHHH--HHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccC
Confidence 3456777887554332322222 3356 899999999 99999999876 24889999999
Q ss_pred hHHHHhhhH
Q 025648 165 TLLIFAQFT 173 (250)
Q Consensus 165 ti~~f~~~~ 173 (250)
|+++|.+|.
T Consensus 77 t~~~~~~G~ 85 (108)
T 2trx_A 77 TLLLFKNGE 85 (108)
T ss_dssp EEEEEETTE
T ss_pred EEEEEeCCE
Confidence 999996654
No 307
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.68 E-value=3.9e-07 Score=66.98 Aligned_cols=86 Identities=17% Similarity=0.120 Sum_probs=58.1
Q ss_pred CCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH-------------------HHHHHHHh
Q 025648 102 ASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV-------------------LLRLVYIF 162 (250)
Q Consensus 102 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~-------------------~~~~~i~~ 162 (250)
..++.+++++...... .+.. .+++ +||++|+.+ .|.+..++..+. +.+|+|.+
T Consensus 10 ~~l~~~~~~~~~~~~~-~~lv---~f~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~ 81 (120)
T 1mek_A 10 LVLRKSNFAEALAAHK-YLLV---EFYA--PWCGHCKAL--APEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRG 81 (120)
T ss_dssp EECCTTTHHHHHHHCS-EEEE---EEEC--SSCSTTSTT--HHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCS
T ss_pred EEechhhHHHHHccCC-eEEE---EEEC--CCCHHHHHh--hHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCc
Confidence 4566677776553221 2222 3366 899999999 999999988752 48999999
Q ss_pred hhhHHHHhhhHHHHHHHhhcccccccchHHHHh-hH-HHHHHHhcccc
Q 025648 163 LPTLLIFAQFTWRRLIRNLKLGSLLEHPRTYLN-RA-IQLFKTLNEPC 208 (250)
Q Consensus 163 fPti~~f~~~~~~~~~~~~~~~~~~~~~~~y~g-r~-~~~~~~l~~~~ 208 (250)
+||+++|.+|. .. .+..|.| +. .++.++|++..
T Consensus 82 ~Pt~~~~~~g~------------~~-~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 82 YPTIKFFRNGD------------TA-SPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp SSEEEEEESSC------------SS-SCEECCCCSSHHHHHHHHHTTS
T ss_pred ccEEEEEeCCC------------cC-CcccccCccCHHHHHHHHHhcc
Confidence 99999997655 10 1244555 33 47888887544
No 308
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.66 E-value=3.7e-07 Score=66.04 Aligned_cols=66 Identities=18% Similarity=0.175 Sum_probs=48.8
Q ss_pred CCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH----------------HHHHHHHhh
Q 025648 100 NTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFL 163 (250)
Q Consensus 100 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~----------------~~~~~i~~f 163 (250)
.+..++.++++..+.... .... .+++ +||++|+.+ .|.+..++..|. +.+|+|.++
T Consensus 5 ~v~~l~~~~~~~~~~~~~-~~lv---~f~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~ 76 (109)
T 3tco_A 5 VTLVLTEENFDEVIRNNK-LVLV---DCWA--EWCAPCHLY--EPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNI 76 (109)
T ss_dssp CCEECCTTTHHHHHHHSS-EEEE---EEEC--TTCHHHHHH--HHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSS
T ss_pred eEEEecHHHHHHHHhcCC-eEEE---EEEC--CCCHHHHhh--hHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccC
Confidence 344567777877654322 2222 3356 899999999 999999999873 489999999
Q ss_pred hhHHHHhhhH
Q 025648 164 PTLLIFAQFT 173 (250)
Q Consensus 164 Pti~~f~~~~ 173 (250)
||+++|.+|.
T Consensus 77 Pt~~~~~~g~ 86 (109)
T 3tco_A 77 PTTLIFVNGQ 86 (109)
T ss_dssp SEEEEEETTE
T ss_pred CEEEEEcCCc
Confidence 9999996654
No 309
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.66 E-value=9.1e-07 Score=65.69 Aligned_cols=66 Identities=9% Similarity=0.072 Sum_probs=46.5
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhh
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLP 164 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fP 164 (250)
+..++.++|+..+......++. .+++ |||++|+.+ .|.+..++..+ ++.+|+|.++|
T Consensus 5 v~~l~~~~f~~~~~~~~~~~lv---~f~a--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~P 77 (122)
T 3aps_A 5 SIDLTPQTFNEKVLQGKTHWVV---DFYA--PWCGPCQNF--APEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYP 77 (122)
T ss_dssp SEECCHHHHHHHTTTCSSCEEE---EEEC--TTCHHHHHH--HHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSS
T ss_pred hhcCCHHHHHHHHhcCCCeEEE---EEEC--CCCHHHHHH--HHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccc
Confidence 4455556664322222222222 3366 899999999 99999999887 24889999999
Q ss_pred hHHHHhhhH
Q 025648 165 TLLIFAQFT 173 (250)
Q Consensus 165 ti~~f~~~~ 173 (250)
|+++|.+|.
T Consensus 78 t~~~~~~~~ 86 (122)
T 3aps_A 78 SVKLYQYER 86 (122)
T ss_dssp EEEEEEEEG
T ss_pred eEEEEeCCC
Confidence 999997765
No 310
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.66 E-value=3.3e-07 Score=71.97 Aligned_cols=43 Identities=16% Similarity=0.233 Sum_probs=37.4
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+|+ |||++|+.+ .|.+..++..| ++.+|+|.++||+++|.+|.
T Consensus 71 F~a--~wC~~C~~~--~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~G~ 129 (155)
T 2ppt_A 71 FWA--PWCGPCRQM--APQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFILFHKGR 129 (155)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEEEEEETTE
T ss_pred EEC--CCCHHHHHH--HHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEEEEEeCCe
Confidence 366 899999999 99999999987 34899999999999997654
No 311
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.66 E-value=6.1e-07 Score=67.55 Aligned_cols=85 Identities=16% Similarity=0.071 Sum_probs=54.4
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCC--------------ChhhhcCchHHHHHHHHHH------------
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWAR--------------SPENLLQQETYLALATAFV------------ 154 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~--------------~ck~~~~~~~~~~lA~~f~------------ 154 (250)
+..++.++|+..+......+.. .+++ |||+ +|+.+ .|.+..++..+.
T Consensus 5 v~~l~~~~f~~~~~~~~k~vlv---~F~a--~wC~~c~~l~~~~~~~~~~C~~~--~p~~~~l~~~~~~~~~~~~vd~d~ 77 (123)
T 1oaz_A 5 IIHLTDDSFDTDVLKADGAILV---DFWA--EWCGPIEESDDRRYDLVGPCKMI--APILDEIADEYQGKLTVAKLNIDQ 77 (123)
T ss_dssp CEECCSTTHHHHTTSCSSEEEE---EEEC--SSCSCBSSSTTSCCSCCCCCCTT--HHHHTTC-------CEEEEEETTS
T ss_pred cEecChhhHHHHHHhCCCeEEE---EEEC--CCCccccccccccccCCCCcHHH--HHHHHHHHHHhcCCeEEEEEECCC
Confidence 4567778887554333333333 3366 8999 99999 999998888763
Q ss_pred ----HHHHHHHhhhhHHHHhhhHHHHHHHhhcccccccchHHHHh-hH-HHHHHHhccc
Q 025648 155 ----LLRLVYIFLPTLLIFAQFTWRRLIRNLKLGSLLEHPRTYLN-RA-IQLFKTLNEP 207 (250)
Q Consensus 155 ----~~~~~i~~fPti~~f~~~~~~~~~~~~~~~~~~~~~~~y~g-r~-~~~~~~l~~~ 207 (250)
+.+|+|.++||+++|.+|. ...++.| +. .++.++|++.
T Consensus 78 ~~~l~~~~~v~~~Pt~~~~~~G~---------------~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 78 NPGTAPKYGIRGIPTLLLFKNGE---------------VAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp CTTTGGGGTCCBSSEEEEEESSS---------------EEEEEESCCCHHHHHHHHTTT
T ss_pred CHHHHHHcCCCccCEEEEEECCE---------------EEEEEeCCCCHHHHHHHHHHH
Confidence 3899999999999996654 1223445 33 3777777743
No 312
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.65 E-value=2e-06 Score=61.87 Aligned_cols=66 Identities=12% Similarity=0.050 Sum_probs=47.9
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhh
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLP 164 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fP 164 (250)
+..++.++++..+......... .+++ |||++|+.+ .|.+..++..+ ++.+|+|.++|
T Consensus 4 v~~l~~~~~~~~~~~~~~~~lv---~f~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~P 76 (107)
T 2i4a_A 4 TLAVSDSSFDQDVLKASGLVLV---DFWA--EWCGPCKMI--GPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIP 76 (107)
T ss_dssp EEECCTTTHHHHTTTCSSEEEE---EEEC--TTCHHHHHH--HHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSS
T ss_pred eeecchhhhhHHHHhCCCEEEE---EEEC--CCChhHHHH--hHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccC
Confidence 3456777777554332222222 3355 899999999 99999999887 24889999999
Q ss_pred hHHHHhhhH
Q 025648 165 TLLIFAQFT 173 (250)
Q Consensus 165 ti~~f~~~~ 173 (250)
|+++|.+|.
T Consensus 77 t~~~~~~G~ 85 (107)
T 2i4a_A 77 TLMLVRDGK 85 (107)
T ss_dssp EEEEEETTE
T ss_pred EEEEEeCCE
Confidence 999996654
No 313
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.65 E-value=1.7e-06 Score=63.13 Aligned_cols=66 Identities=11% Similarity=0.115 Sum_probs=47.9
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhh
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLP 164 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fP 164 (250)
+..++.++++..+......... .+++ +||++|+.+ .|.+..++..+ ++.+|+|.++|
T Consensus 7 v~~l~~~~~~~~~~~~~~~~vv---~f~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~P 79 (112)
T 1t00_A 7 LKHVTDDSFEQDVLKNDKPVLV---DFWA--AWCGPCRQI--APSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIP 79 (112)
T ss_dssp CEEECTTTHHHHTTTCSSCEEE---EEEC--TTCHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSS
T ss_pred EEecchhhHHHHHhhCCCeEEE---EEEC--CCCHhHHhc--CHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCccc
Confidence 4556777776544332322222 3356 899999999 99999999876 34899999999
Q ss_pred hHHHHhhhH
Q 025648 165 TLLIFAQFT 173 (250)
Q Consensus 165 ti~~f~~~~ 173 (250)
|+++|.+|.
T Consensus 80 t~~~~~~G~ 88 (112)
T 1t00_A 80 TLNVYQGGE 88 (112)
T ss_dssp EEEEEETTE
T ss_pred EEEEEeCCE
Confidence 999987655
No 314
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=96.81 E-value=7.1e-06 Score=61.52 Aligned_cols=41 Identities=7% Similarity=-0.002 Sum_probs=31.3
Q ss_pred CCCCCCcCCCChhhhcCchHH---HHHHHHH------------------HHHHHHHHhhhhHHHHh
Q 025648 126 EESCPFSWARSPENLLQQETY---LALATAF------------------VLLRLVYIFLPTLLIFA 170 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~---~~lA~~f------------------~~~~~~i~~fPti~~f~ 170 (250)
.+++ |||++|+.+ .|.+ ..++..+ ++.+|+|.++||+++|.
T Consensus 25 ~f~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d 86 (130)
T 2lst_A 25 YFHS--EHCPYCQQM--NTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLV 86 (130)
Confidence 3466 999999998 7777 5555432 23789999999999994
No 315
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=97.64 E-value=0.00017 Score=63.40 Aligned_cols=86 Identities=13% Similarity=0.130 Sum_probs=62.1
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcCCCCEEEEE--------------------cCCCChhHHHhhCCC----
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSSIPHFAIE--------------------ESAIRPSILSKYGVH---- 64 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~~~~v~~~--------------------d~~~~~~l~~~~~I~---- 64 (250)
.++++++.|| +.|||.|....+.|.+ ..+++...+++. -.|.+.++++.|||.
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~e~~~~~~--~~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~ygv~~~~~ 100 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTREAVEFSR--ENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVLENGK 100 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHHHHHHHHH--SCCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHTTCEETTE
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHH--HhhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhcCCCCCCc
Confidence 5688999999 6799999998887764 234454445542 112345889999994
Q ss_pred ccCeEEEE--eCceeEEEeCC---CCHHHHHHHHHHhh
Q 025648 65 GFPTLFLL--NSSMRVRYHGS---RTLDSLVAFYSDVT 97 (250)
Q Consensus 65 ~~PTi~l~--~g~~~~~~~G~---~~~~~l~~fi~~~~ 97 (250)
.+|+.+++ +|.....|.+. ...+++.+++++..
T Consensus 101 ~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~~ 138 (322)
T 4eo3_A 101 TVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLI 138 (322)
T ss_dssp ECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHHH
T ss_pred CccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhhc
Confidence 57899999 77777777764 35788888888764
No 316
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.63 E-value=1e-06 Score=67.50 Aligned_cols=66 Identities=8% Similarity=-0.022 Sum_probs=47.0
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhh
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLP 164 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fP 164 (250)
+..++.++|++.+......+++ .+++ |||++|+.+ .|.+..++..+ ++.+|+|.++|
T Consensus 8 v~~l~~~~f~~~~~~~~~~vlv---~F~a--~wC~~C~~~--~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 80 (140)
T 3hz4_A 8 IIEFEDMTWSQQVEDSKKPVVV---MFYS--PACPYCKAM--EPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTP 80 (140)
T ss_dssp EEEECHHHHHHHTTTCSSCEEE---EEEC--TTCHHHHHH--HHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEES
T ss_pred eEEcchHhHHHHHHhCCCcEEE---EEEC--CCChhHHHH--HHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCC
Confidence 3445556666333222222222 3366 899999999 99999999887 35899999999
Q ss_pred hHHHHhhhH
Q 025648 165 TLLIFAQFT 173 (250)
Q Consensus 165 ti~~f~~~~ 173 (250)
|+++|.+|.
T Consensus 81 t~~~~~~G~ 89 (140)
T 3hz4_A 81 TFKFFCHGR 89 (140)
T ss_dssp EEEEEETTE
T ss_pred EEEEEeCCc
Confidence 999997665
No 317
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.60 E-value=0.00011 Score=54.48 Aligned_cols=56 Identities=23% Similarity=0.390 Sum_probs=39.0
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCC--C-----hhHHHhhCCCccCeEEEEeCcee
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAI--R-----PSILSKYGVHGFPTLFLLNSSMR 77 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~--~-----~~l~~~~~I~~~PTi~l~~g~~~ 77 (250)
++.|.++|||+|++..+.++++. +. +...+.+. + ..+.+..|..++|++++ +|+.+
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~~-----i~-~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi-~g~~i 81 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSLG-----VE-CNVLELDQVDDGARVQEVLSEITNQKTVPNIFV-NKVHV 81 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT-----CC-CEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE-TTEEE
T ss_pred EEEEEcCCCCcHHHHHHHHHHcC-----CC-cEEEEecCCCChHHHHHHHHHHhCCCccCEEEE-CCEEE
Confidence 45599999999999999998753 22 23333332 2 23667789999999966 77544
No 318
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.59 E-value=3.3e-07 Score=68.22 Aligned_cols=64 Identities=11% Similarity=0.020 Sum_probs=45.1
Q ss_pred CCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhhhH
Q 025648 103 SLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTL 166 (250)
Q Consensus 103 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fPti 166 (250)
.+++++|++.+......... .+++ +||++|+.+ .|.+..++..+ ++.+|+|.++||+
T Consensus 17 ~~~~~~f~~~v~~~~k~vlv---~f~a--~~C~~C~~~--~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~ 89 (119)
T 1w4v_A 17 IQDGPDFQDRVVNSETPVVV---DFHA--QWCGPCKIL--GPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTV 89 (119)
T ss_dssp CCSHHHHHHHTTTCSSCEEE---EEEC--TTCHHHHHH--HHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred ecChhhHHHHHHcCCCcEEE---EEEC--CCCHHHHHH--HHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccEE
Confidence 44555666544332222222 3356 899999999 99999998876 3488999999999
Q ss_pred HHHhhhH
Q 025648 167 LIFAQFT 173 (250)
Q Consensus 167 ~~f~~~~ 173 (250)
++|.+|.
T Consensus 90 ~~~~~G~ 96 (119)
T 1w4v_A 90 LAMKNGD 96 (119)
T ss_dssp EEEETTE
T ss_pred EEEeCCc
Confidence 9996554
No 319
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.59 E-value=3.1e-06 Score=65.25 Aligned_cols=66 Identities=11% Similarity=0.135 Sum_probs=49.0
Q ss_pred CCCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhh
Q 025648 100 NTASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFL 163 (250)
Q Consensus 100 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~f 163 (250)
.+..++.++++..+.. ...+++ .+++ +||++|+.+ .|.+..++..+ +..+|+|.++
T Consensus 39 ~v~~l~~~~~~~~~~~-~k~vlv---~F~a--~wC~~C~~~--~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 110 (148)
T 3p2a_A 39 EVINATAETLDKLLQD-DLPMVI---DFWA--PWCGPCRSF--APIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSI 110 (148)
T ss_dssp CCEECCTTTHHHHTTC-SSCEEE---EEEC--SSCHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSS
T ss_pred CceecCHHHHHHHHhc-CCcEEE---EEEC--CCCHHHHHH--HHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCcc
Confidence 3445667777776632 222222 3366 899999999 99999999887 2489999999
Q ss_pred hhHHHHhhhH
Q 025648 164 PTLLIFAQFT 173 (250)
Q Consensus 164 Pti~~f~~~~ 173 (250)
||+++|.+|.
T Consensus 111 Pt~~~~~~G~ 120 (148)
T 3p2a_A 111 PTIMLYRNGK 120 (148)
T ss_dssp SEEEEEETTE
T ss_pred CEEEEEECCe
Confidence 9999997665
No 320
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.59 E-value=2.5e-06 Score=61.18 Aligned_cols=65 Identities=14% Similarity=0.116 Sum_probs=47.3
Q ss_pred CCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhhh
Q 025648 102 ASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPT 165 (250)
Q Consensus 102 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fPt 165 (250)
..++.+++++.+......... .+++ +||++|+.+ .|.+..++..+ ++.+|+|.++||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v---~f~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt 75 (105)
T 1fb6_A 3 QDVNDSSWKEFVLESEVPVMV---DFWA--PWCGPCKLI--APVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPT 75 (105)
T ss_dssp EECCTTTHHHHTTTCSSCEEE---EEEC--TTCHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred eechhhhHHHHHhcCCCcEEE---EEEC--CCChHHHHH--HHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccE
Confidence 356677777755433322222 3356 899999999 99999998876 348899999999
Q ss_pred HHHHhhhH
Q 025648 166 LLIFAQFT 173 (250)
Q Consensus 166 i~~f~~~~ 173 (250)
++++.+|.
T Consensus 76 ~~~~~~g~ 83 (105)
T 1fb6_A 76 VLFFKNGE 83 (105)
T ss_dssp EEEEETTE
T ss_pred EEEEeCCe
Confidence 99987665
No 321
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.58 E-value=2.8e-06 Score=64.72 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=48.5
Q ss_pred CCCCCCCCccccCCCCCc-ccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH-----------------HHHHHHHH-
Q 025648 101 TASLDKISPDKVGKASNH-EKHNNTEEESCPFSWARSPENLLQQETYLALATAF-----------------VLLRLVYI- 161 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f-----------------~~~~~~i~- 161 (250)
+..++.++|++.+..... .+++ .+++ |||++|+.+ .|.+..++..| ++.+|+|.
T Consensus 9 v~~l~~~~f~~~~~~~~~~~vlv---~f~a--~wC~~C~~~--~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~ 81 (137)
T 2dj0_A 9 IKYFNDKTIDEELERDKRVTWIV---EFFA--NWSNDCQSF--APIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVST 81 (137)
T ss_dssp CEECCTTHHHHHHHHSTTSCEEE---EECC--TTCSTTTTT--HHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCC
T ss_pred EEEccHhhHHHHHhcCCCCEEEE---EEEC--CCCHHHHHH--HHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcc
Confidence 345566777766543321 1222 3466 999999999 99999999887 24889999
Q ss_pred -----hhhhHHHHhhhH
Q 025648 162 -----FLPTLLIFAQFT 173 (250)
Q Consensus 162 -----~fPti~~f~~~~ 173 (250)
++||+++|.+|.
T Consensus 82 ~~~~~~~Pt~~~~~~G~ 98 (137)
T 2dj0_A 82 SPLTKQLPTLILFQGGK 98 (137)
T ss_dssp CSSSSCSSEEEEESSSS
T ss_pred cCCcCCCCEEEEEECCE
Confidence 999999998775
No 322
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.57 E-value=1e-06 Score=63.40 Aligned_cols=63 Identities=13% Similarity=0.148 Sum_probs=45.8
Q ss_pred CCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhhhH
Q 025648 103 SLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTL 166 (250)
Q Consensus 103 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fPti 166 (250)
.+++++|+.+..... .... .+++ |||++|+.+ .|.+..++..+ ++.+|+|.++||+
T Consensus 4 ~l~~~~~~~~~~~~~-~~~v---~f~~--~~C~~C~~~--~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~ 75 (105)
T 1nsw_A 4 TLTDANFQQAIQGDG-PVLV---DFWA--AWCGPCRMM--APVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTL 75 (105)
T ss_dssp EECTTTHHHHHSSSS-CEEE---EEEC--TTCHHHHHH--HHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred eccHHhHHHHHhCCC-cEEE---EEEC--CCCHHHHHH--HHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEE
Confidence 456677775544322 2222 3356 899999999 99999998876 3488999999999
Q ss_pred HHHhhhH
Q 025648 167 LIFAQFT 173 (250)
Q Consensus 167 ~~f~~~~ 173 (250)
++|.+|.
T Consensus 76 ~~~~~G~ 82 (105)
T 1nsw_A 76 ILFKGGR 82 (105)
T ss_dssp EEEETTE
T ss_pred EEEeCCe
Confidence 9996554
No 323
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.56 E-value=1.4e-06 Score=63.59 Aligned_cols=66 Identities=17% Similarity=0.218 Sum_probs=48.0
Q ss_pred CCCCCCCCccccCCC-CCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhh
Q 025648 101 TASLDKISPDKVGKA-SNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFL 163 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~f 163 (250)
+..++.+++++.+.. ....... .+++ |||++|+.+ .|.+..++..+ ++.+|+|.++
T Consensus 7 v~~l~~~~~~~~~~~~~~~~vlv---~f~a--~wC~~C~~~--~~~l~~~~~~~~~v~~~~vd~~~~~~~~~~~~~v~~~ 79 (111)
T 2pu9_C 7 VTEVNKDTFWPIVKAAGDKPVVL---DMFT--QWCGPSKAM--APKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVV 79 (111)
T ss_dssp EEEECTTTHHHHHTTCTTSCEEE---EEEC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSBS
T ss_pred cEEechHHHHHHHHhcCCCEEEE---EEEC--CcCHhHHHH--CHHHHHHHHHCCCeEEEEEecCcchHHHHHHcCCCee
Confidence 345677777776653 2222222 3466 899999999 99999998875 2488999999
Q ss_pred hhHHHHhhhH
Q 025648 164 PTLLIFAQFT 173 (250)
Q Consensus 164 Pti~~f~~~~ 173 (250)
||++++.+|.
T Consensus 80 Pt~~~~~~G~ 89 (111)
T 2pu9_C 80 PTFKILKENS 89 (111)
T ss_dssp SEEEEESSSS
T ss_pred eEEEEEeCCc
Confidence 9988887765
No 324
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.56 E-value=1.3e-06 Score=63.11 Aligned_cols=64 Identities=13% Similarity=0.097 Sum_probs=44.9
Q ss_pred CCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhhhH
Q 025648 103 SLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTL 166 (250)
Q Consensus 103 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fPti 166 (250)
.++++++++.+......... .+++ +||++|+.+ .|.+..++..+ ++.+|+|.++||+
T Consensus 5 ~l~~~~~~~~~~~~~~~~lv---~f~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 77 (107)
T 1dby_A 5 AVNDDTFKNVVLESSVPVLV---DFWA--PWCGPCRII--APVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTI 77 (107)
T ss_dssp EECHHHHHHHTTTCSSCEEE---EEEC--TTCHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEE
T ss_pred eccHHHHHHHHhcCCCcEEE---EEEC--CCCHhHHHH--HHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEE
Confidence 34455555544332222222 3356 899999999 99999998876 2488999999999
Q ss_pred HHHhhhH
Q 025648 167 LIFAQFT 173 (250)
Q Consensus 167 ~~f~~~~ 173 (250)
++|.+|.
T Consensus 78 ~~~~~G~ 84 (107)
T 1dby_A 78 MVFKGGK 84 (107)
T ss_dssp EEESSSS
T ss_pred EEEeCCE
Confidence 9887655
No 325
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.52 E-value=3.1e-06 Score=70.16 Aligned_cols=66 Identities=15% Similarity=0.078 Sum_probs=49.8
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH----------------HHHHHHHhhh
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLP 164 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~----------------~~~~~i~~fP 164 (250)
...++.++|+..+......+.+ .+|+ |||++|+.+ .|.+..++..+. +.+|+|.++|
T Consensus 14 ~~~lt~~~f~~~v~~~~k~vvv---~F~a--~wC~~C~~~--~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~P 86 (222)
T 3dxb_A 14 IIHLTDDSFDTDVLKADGAILV---DFWA--EWCGPCKMI--APILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIP 86 (222)
T ss_dssp CEECCTTTHHHHHTTCSSCEEE---EEEC--TTCHHHHHH--HHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBS
T ss_pred ceeCCHHHHHHHHHhcCCEEEE---EEEC--CcCHHHHHH--HHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCC
Confidence 3467888888743332323333 3467 999999999 999999998873 4899999999
Q ss_pred hHHHHhhhH
Q 025648 165 TLLIFAQFT 173 (250)
Q Consensus 165 ti~~f~~~~ 173 (250)
|+++|.+|.
T Consensus 87 t~~~~~~G~ 95 (222)
T 3dxb_A 87 TLLLFKNGE 95 (222)
T ss_dssp EEEEEETTE
T ss_pred EEEEEECCe
Confidence 999997664
No 326
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.51 E-value=2.4e-06 Score=64.60 Aligned_cols=66 Identities=15% Similarity=0.096 Sum_probs=48.1
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH----------------HHHHHHHhhh
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLP 164 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~----------------~~~~~i~~fP 164 (250)
+..++.++|+..+......+.. .+++ +||++|+.+ .|.+..++..+- +.+|+|.++|
T Consensus 24 v~~l~~~~f~~~~~~~~k~vlv---~F~a--~wC~~C~~~--~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 96 (128)
T 2o8v_B 24 IIHLTDDSFDTDVLKADGAILV---DFWA--EWCGPAKMI--APILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIP 96 (128)
T ss_dssp SEEECTTTHHHHTTTCSSEEEE---EEEC--SSCHHHHHT--HHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSS
T ss_pred cEecChhhHHHHHHhcCCEEEE---EEEC--CCCHHHHHH--hHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccC
Confidence 4566777887544322222222 3366 899999999 999999998762 3889999999
Q ss_pred hHHHHhhhH
Q 025648 165 TLLIFAQFT 173 (250)
Q Consensus 165 ti~~f~~~~ 173 (250)
|+++|.+|.
T Consensus 97 t~~~~~~G~ 105 (128)
T 2o8v_B 97 TLLLFKNGE 105 (128)
T ss_dssp EEEEEETTE
T ss_pred EEEEEeCCE
Confidence 999996554
No 327
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.50 E-value=1.6e-06 Score=62.86 Aligned_cols=43 Identities=7% Similarity=0.034 Sum_probs=36.9
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ |||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 28 f~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~ 85 (107)
T 1gh2_A 28 FTM--RGCGPCLRI--APAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTFQFFRNKV 85 (107)
T ss_dssp EEC--SSCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSSSEEEEEETTE
T ss_pred EEC--CCChhhHHH--HHHHHHHHHHCCCcEEEEEECccCHHHHHhcCCCcccEEEEEECCe
Confidence 366 899999999 99999999875 34889999999999997665
No 328
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.50 E-value=6e-07 Score=66.61 Aligned_cols=43 Identities=16% Similarity=0.294 Sum_probs=37.1
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ +||++|+.+ .|.+..++..| ++.+|+|.++||+++|.+|.
T Consensus 38 F~a--~wC~~C~~~--~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~ 95 (116)
T 3qfa_C 38 FSA--TWCGPSKMI--KPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKSMPTFQFFKKGQ 95 (116)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTCCSSSEEEEESSSS
T ss_pred EEC--CCCHHHHHH--HHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCccccEEEEEeCCe
Confidence 366 899999999 99999999875 35899999999999997665
No 329
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.48 E-value=0.00035 Score=57.84 Aligned_cols=87 Identities=17% Similarity=0.265 Sum_probs=63.3
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcCC--CCEEEEE-c--------------------------CCCChhHHH
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIE-E--------------------------SAIRPSILS 59 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~--~~~v~~~-d--------------------------~~~~~~l~~ 59 (250)
.++++++.|| +.||+.|....+.|++..++|.. ...+++- | +|...++++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak 130 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSR 130 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHHH
Confidence 5688999999 99999999999999999998863 4444442 0 123457999
Q ss_pred hhCCC------ccCeEEEE--eCceeEEE-e---CCCCHHHHHHHHHHh
Q 025648 60 KYGVH------GFPTLFLL--NSSMRVRY-H---GSRTLDSLVAFYSDV 96 (250)
Q Consensus 60 ~~~I~------~~PTi~l~--~g~~~~~~-~---G~~~~~~l~~fi~~~ 96 (250)
.|||- .++.++++ +|...... . -+|+.+++++.|+..
T Consensus 131 ~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 131 DYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAF 179 (216)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHh
Confidence 99983 35778888 45443322 1 268999999988865
No 330
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.46 E-value=4.8e-06 Score=63.55 Aligned_cols=65 Identities=14% Similarity=0.083 Sum_probs=39.8
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH----------------HHHHHHHhhh
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLP 164 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~----------------~~~~~i~~fP 164 (250)
+..++.++++..+..... +.+ .+++ +||++|+.+ .|.+..++..|- +.+|+|.++|
T Consensus 35 v~~l~~~~~~~~~~~~~~-vvv---~f~~--~~C~~C~~~--~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 106 (140)
T 1v98_A 35 VVEADEKGFAQEVAGAPL-TLV---DFFA--PWCGPCRLV--SPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVP 106 (140)
T ss_dssp --------------CCCE-EEE---EEEC--TTCHHHHHH--HHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSS
T ss_pred cccCCHHHHHHHHHcCCC-EEE---EEEC--CCCHHHHHH--HHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCccC
Confidence 345666777766554333 333 3356 899999999 999999998762 3789999999
Q ss_pred hHHHHhhhH
Q 025648 165 TLLIFAQFT 173 (250)
Q Consensus 165 ti~~f~~~~ 173 (250)
|+++|.+|.
T Consensus 107 t~~~~~~G~ 115 (140)
T 1v98_A 107 TLVLFRRGA 115 (140)
T ss_dssp EEEEEETTE
T ss_pred EEEEEeCCc
Confidence 999997665
No 331
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.44 E-value=0.0015 Score=50.51 Aligned_cols=91 Identities=15% Similarity=0.187 Sum_probs=65.7
Q ss_pred CCeEEEE-EEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcC--CCChhHHHhhCCCc--cCeEEEEeC-ceeEEEe---
Q 025648 11 HEYVAVL-FYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES--AIRPSILSKYGVHG--FPTLFLLNS-SMRVRYH--- 81 (250)
Q Consensus 11 ~~~vlV~-Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~--~~~~~l~~~~~I~~--~PTi~l~~g-~~~~~~~--- 81 (250)
+-++.++ |...--..-..+++.++++|+.|++...+..+|. +....+.+.||+.. +|++.+++. .....|.
T Consensus 31 ~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~v~i~~~~~~~~Ky~~~~ 110 (147)
T 3bj5_A 31 EIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPES 110 (147)
T ss_dssp SCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCGGGCSEEEEEECSSSCEEECCSC
T ss_pred CCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCcccCCEEEEEecccccccCCCCc
Confidence 3344444 4433334466788999999999998777777777 55567889999996 999999942 2232343
Q ss_pred CCCCHHHHHHHHHHhhCCCC
Q 025648 82 GSRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 82 G~~~~~~l~~fi~~~~~~~~ 101 (250)
+..+.+.|.+|+++.+.-+.
T Consensus 111 ~~~t~~~i~~Fv~d~l~GkL 130 (147)
T 3bj5_A 111 EELTAERITEFCHRFLEGKI 130 (147)
T ss_dssp CCCCHHHHHHHHHHHHTTCS
T ss_pred ccCCHHHHHHHHHHHHcCCc
Confidence 67899999999999986554
No 332
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.43 E-value=1.9e-06 Score=62.91 Aligned_cols=43 Identities=19% Similarity=0.249 Sum_probs=34.6
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH-----------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF-----------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f-----------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ +||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 28 f~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~ 87 (112)
T 3d6i_A 28 FHT--SWAEPCKAL--KQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFIIIHKGT 87 (112)
T ss_dssp EEC--CC--CHHHH--HHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred EEC--CCCHHHHHH--HHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEEEEECCE
Confidence 366 899999999 99999999874 24889999999999997655
No 333
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.43 E-value=1.3e-06 Score=62.89 Aligned_cols=65 Identities=11% Similarity=0.145 Sum_probs=46.7
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhh
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLP 164 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fP 164 (250)
+..++.++++.+..... .... .++. +||++|+.+ .|.+..++..+ ++.+|+|.++|
T Consensus 3 v~~l~~~~~~~~~~~~~-~~lv---~f~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~P 74 (109)
T 2yzu_A 3 PIEVTDQNFDETLGQHP-LVLV---DFWA--EWCAPCRMI--APILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIP 74 (109)
T ss_dssp CEECCTTTHHHHHHHCS-EEEE---EEEC--TTCHHHHHH--HHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSS
T ss_pred ceEccHhHHHHHhcCCC-eEEE---EEEC--CCCHHHHHh--hHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCC
Confidence 34567777775543222 2222 2355 899999999 99999998876 34899999999
Q ss_pred hHHHHhhhH
Q 025648 165 TLLIFAQFT 173 (250)
Q Consensus 165 ti~~f~~~~ 173 (250)
|+++|.+|.
T Consensus 75 t~~~~~~g~ 83 (109)
T 2yzu_A 75 TVILFKDGQ 83 (109)
T ss_dssp EEEEEETTE
T ss_pred EEEEEeCCc
Confidence 999996654
No 334
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.42 E-value=6.6e-06 Score=61.42 Aligned_cols=67 Identities=7% Similarity=-0.058 Sum_probs=47.8
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH------------------HHHHHHHHhhhhHHHHh-hhHHHHHHHhhcccccc
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF------------------VLLRLVYIFLPTLLIFA-QFTWRRLIRNLKLGSLL 187 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f------------------~~~~~~i~~fPti~~f~-~~~~~~~~~~~~~~~~~ 187 (250)
+++ +||++|+.+ .|.+..++..+ +..+|+|.++||+++|. +|.
T Consensus 33 f~a--~wC~~C~~~--~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~-------------- 94 (126)
T 2l57_A 33 FKT--DTCPYCVEM--QKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGN-------------- 94 (126)
T ss_dssp EEC--SSCHHHHHH--HHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCC--------------
T ss_pred EEC--CCCccHHHH--HHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCC--------------
Confidence 366 899999999 99999988876 23789999999999998 443
Q ss_pred cchHHHHh-hH-HHHHHHhcccccCCc
Q 025648 188 EHPRTYLN-RA-IQLFKTLNEPCKRSN 212 (250)
Q Consensus 188 ~~~~~y~g-r~-~~~~~~l~~~~~t~~ 212 (250)
....+.| +. .++.++|+...+...
T Consensus 95 -~~~~~~G~~~~~~l~~~l~~~~~~~~ 120 (126)
T 2l57_A 95 -KFYVHQGLMRKNNIETILNSLGVKEG 120 (126)
T ss_dssp -EEEEEESCCCHHHHHHHHHHHCCCCC
T ss_pred -EEEEecCCCCHHHHHHHHHHHhcccc
Confidence 1223444 22 367777776555444
No 335
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.38 E-value=6.4e-05 Score=61.36 Aligned_cols=91 Identities=11% Similarity=0.117 Sum_probs=47.5
Q ss_pred hhHHHhhCCCccCeEEEEeCceeEEEeCCCC--H----HHHHHHHHHhhCCCCC-----CCCCCCccccCC-CCCccccc
Q 025648 55 PSILSKYGVHGFPTLFLLNSSMRVRYHGSRT--L----DSLVAFYSDVTGMNTA-----SLDKISPDKVGK-ASNHEKHN 122 (250)
Q Consensus 55 ~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~--~----~~l~~fi~~~~~~~~~-----~l~~~~~~~~~~-~~~~~~~~ 122 (250)
...++.+||+++||+++ +|+......+..+ . +++.+.+..+...... .....++..+.. .......+
T Consensus 40 ~~~a~~~gi~gvP~fvi-ngk~~~~~~~~~~~~~~~f~~~~~~l~~~L~s~~~p~~~~~~~~g~~y~~l~~p~~~~~~vv 118 (197)
T 1un2_A 40 EKAAADVQLRGVPAMFV-NGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEKKGGGTGAQYEDGKQYTTLEKPVAGAPQVL 118 (197)
T ss_dssp HHHHHHTTCCSSSEEEE-TTTEEECGGGSCCSSHHHHHHHHHHHHHHHTC---------CCBTTTEEECSSCCTTCCSEE
T ss_pred HHHHHHcCCCcCCEEEE-cceEecCccccccccHHHHHHHHHHHHHHHHhCcccccccccCCCCCceEccCCCCCCCEEE
Confidence 45688999999999865 7775543223221 2 2233322222211111 112233443332 11111111
Q ss_pred CCCCCCCCCcCCCChhhhcCchHH---HHHHHHH
Q 025648 123 NTEEESCPFSWARSPENLLQQETY---LALATAF 153 (250)
Q Consensus 123 ~~~~~~~~~pw~~~ck~~~~~~~~---~~lA~~f 153 (250)
.++. +||+||+++ .|.+ +.++..+
T Consensus 119 ---eFf~--~~C~~C~~~--~p~~~~~~~l~~~~ 145 (197)
T 1un2_A 119 ---EFFS--FFCPHCYQF--EEVLHISDNVKKKL 145 (197)
T ss_dssp ---EEEC--TTCHHHHHH--HHTSCHHHHHTTSS
T ss_pred ---EEEC--CCChhHHHh--CcccccHHHHHHHC
Confidence 3356 899999999 9988 8877764
No 336
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.37 E-value=5.6e-06 Score=65.31 Aligned_cols=44 Identities=7% Similarity=-0.019 Sum_probs=39.5
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHH----------------HHHHHHHhhhhHHHHhhhH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~----------------~~~~~i~~fPti~~f~~~~ 173 (250)
.+++ +||++|+.+ .|.+++||..+- ..+|+|.+-||+++|.+|.
T Consensus 47 dF~A--~WCgPCk~m--~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fFk~G~ 106 (160)
T 2av4_A 47 RFGH--DYDPDCMKM--DELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFFYRNK 106 (160)
T ss_dssp EEEC--TTSHHHHHH--HHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEEETTE
T ss_pred EEEC--CCChhHHHH--HHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEEECCE
Confidence 4477 999999999 999999999983 2999999999999999877
No 337
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=97.37 E-value=2e-06 Score=63.32 Aligned_cols=39 Identities=15% Similarity=0.119 Sum_probs=32.7
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhhhHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTLLI 168 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fPti~~ 168 (250)
.+++ |||++|+.+ .|.+..+|..+ ++.+|+|.++||+++
T Consensus 18 ~F~A--~WC~~C~~~--~p~~~~~a~~~~~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i 72 (106)
T 3kp8_A 18 MYGA--YWCPHCQDQ--KELFGAAFDQVPYVECSPNGPGTPQAQECTEAGITSYPTWII 72 (106)
T ss_dssp EEEC--TTCHHHHHH--HHHHGGGGGGSCEEESCTTCTTSCCCHHHHHTTCCSSSEEEE
T ss_pred EEEC--CCCHHHHHH--HHHHHHHHHhCCEEEEecccccchhHHHHHHcCCeEeCEEEE
Confidence 3467 999999999 99999888654 457899999999776
No 338
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.34 E-value=3.5e-06 Score=62.70 Aligned_cols=67 Identities=16% Similarity=0.201 Sum_probs=47.8
Q ss_pred CCCCCCCCCccccCCC-CCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHh
Q 025648 100 NTASLDKISPDKVGKA-SNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIF 162 (250)
Q Consensus 100 ~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~ 162 (250)
.+..++.+++++.+.. ....... .+++ +||++|+.+ .|.+..++..+ ++.+|+|.+
T Consensus 19 ~v~~l~~~~~~~~~~~~~~~~~vv---~f~a--~wC~~C~~~--~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~v~~ 91 (124)
T 1faa_A 19 KVTEVNKDTFWPIVKAAGDKPVVL---DMFT--QWCGPCKAM--APKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRV 91 (124)
T ss_dssp SEEEECTTTHHHHHHHTTTSCEEE---EEEC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSS
T ss_pred ceEEecchhHHHHHHhcCCCEEEE---EEEC--CcCHhHHHH--hHHHHHHHHHCCCCEEEEEecCcchHHHHHHcCCCe
Confidence 3445677777765542 1222222 3366 899999999 99999998876 247899999
Q ss_pred hhhHHHHhhhH
Q 025648 163 LPTLLIFAQFT 173 (250)
Q Consensus 163 fPti~~f~~~~ 173 (250)
+||++++.+|.
T Consensus 92 ~Pt~~~~~~G~ 102 (124)
T 1faa_A 92 VPTFKILKENS 102 (124)
T ss_dssp SSEEEEEETTE
T ss_pred eeEEEEEeCCc
Confidence 99998887765
No 339
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.34 E-value=0.00034 Score=51.22 Aligned_cols=56 Identities=13% Similarity=0.291 Sum_probs=38.9
Q ss_pred EEEEEc-----CCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCCh----hHHHhhCCCccCeEEEEeCcee
Q 025648 15 AVLFYA-----SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKYGVHGFPTLFLLNSSMR 77 (250)
Q Consensus 15 lV~Fya-----~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~----~l~~~~~I~~~PTi~l~~g~~~ 77 (250)
++.|+. +||++|++..+.+++. ++ .+...|.+.++ .+.+..|..++|+++ ++|+.+
T Consensus 17 vvvy~~g~~~~~~Cp~C~~ak~~L~~~-----~i-~~~~vdi~~~~~~~~~l~~~~g~~~vP~if-i~g~~i 81 (109)
T 1wik_A 17 VMLFMKGNKQEAKCGFSKQILEILNST-----GV-EYETFDILEDEEVRQGLKTFSNWPTYPQLY-VRGDLV 81 (109)
T ss_dssp EEEEESSTTTCCCSSTHHHHHHHHHHT-----CS-CEEEEESSSCHHHHHHHHHHHSCCSSCEEE-CSSSEE
T ss_pred EEEEEecCCCCCCCchHHHHHHHHHHc-----CC-CeEEEECCCCHHHHHHHHHHhCCCCCCEEE-ECCEEE
Confidence 445777 9999999999999875 33 34444555555 355667899999853 277644
No 340
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=97.33 E-value=0.00058 Score=54.74 Aligned_cols=72 Identities=8% Similarity=0.158 Sum_probs=49.6
Q ss_pred CC-eEEEEEEcCCChhHHh-hhHHHHHHHHHcC--CC-CEEEEE-c---------------------CCCChhHHHhhCC
Q 025648 11 HE-YVAVLFYASWCPFSRN-FRPSFSVLSSLYS--SI-PHFAIE-E---------------------SAIRPSILSKYGV 63 (250)
Q Consensus 11 ~~-~vlV~Fya~wC~~C~~-~~p~~e~la~~~~--~~-~~v~~~-d---------------------~~~~~~l~~~~~I 63 (250)
++ .+|+.|++.|||.|.. ..|.|.+..++|+ +. ..+++- | +|.+.++++.||+
T Consensus 47 Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l~~~f~lLsD~~~~va~ayGv 126 (176)
T 4f82_A 47 GKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGL 126 (176)
T ss_dssp TCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTC
T ss_pred CCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhCCCCCceEEEcCchHHHHHhCC
Confidence 44 5566777999999999 9999999998885 34 444441 0 1224578888887
Q ss_pred C------c-----cCeEEEE-eCceeEEEeC
Q 025648 64 H------G-----FPTLFLL-NSSMRVRYHG 82 (250)
Q Consensus 64 ~------~-----~PTi~l~-~g~~~~~~~G 82 (250)
. + .|+.+++ +|+....+.+
T Consensus 127 ~~~~~~~G~g~~s~R~tfII~dG~I~~~~~~ 157 (176)
T 4f82_A 127 TQDLSARGMGIRSLRYAMVIDGGVVKTLAVE 157 (176)
T ss_dssp EEECGGGTCCEEECCEEEEEETTEEEEEEEC
T ss_pred CccccccCCCcccccEEEEEcCCEEEEEEEc
Confidence 3 2 4777777 7776666654
No 341
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.29 E-value=7e-06 Score=60.06 Aligned_cols=43 Identities=12% Similarity=0.109 Sum_probs=36.4
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ |||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 26 f~a--~wC~~C~~~--~~~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 83 (110)
T 2l6c_A 26 FHK--NLCPHCKNM--EKVLDKFGARAPQVAISSVDSEARPELMKELGFERVPTLVFIRDGK 83 (110)
T ss_dssp EEC--SSCSTHHHH--HHHHHHHHTTCTTSCEEEEEGGGCHHHHHHTTCCSSCEEEEEESSS
T ss_pred EEC--CCCHhHHHH--HHHHHHHHHHCCCcEEEEEcCcCCHHHHHHcCCcccCEEEEEECCE
Confidence 466 899999999 99999998765 34889999999999996654
No 342
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=97.29 E-value=3.9e-06 Score=62.73 Aligned_cols=43 Identities=19% Similarity=0.267 Sum_probs=36.8
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
++. +||++|+.+ .|.+..++..| ++.+|+|.++||+++|.+|.
T Consensus 43 f~~--~~C~~C~~~--~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~ 100 (130)
T 1wmj_A 43 FTA--SWCGPCRFI--APVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGA 100 (130)
T ss_dssp CCS--SSCSCSSSS--HHHHHHHHHHCTTBCCEECCTTTSGGGHHHHTCCSSCCCCBCTTTT
T ss_pred EEC--CCChhHHHH--HHHHHHHHHHCCCCEEEEEeccchHHHHHHcCCCccceEEEEeCCe
Confidence 356 899999999 99999998876 24889999999999997665
No 343
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.27 E-value=0.0014 Score=58.51 Aligned_cols=93 Identities=10% Similarity=-0.054 Sum_probs=70.6
Q ss_pred cCCCeEEEEEEcCCCh-hHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCC--ccCeEEEEeCceeEEEe---C
Q 025648 9 NSHEYVAVLFYASWCP-FSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVH--GFPTLFLLNSSMRVRYH---G 82 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~-~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~--~~PTi~l~~g~~~~~~~---G 82 (250)
..+.+++|.|+.++|. .++.+...+.+++..+++...+..+|++..+.+++.+|+. .+|++++++.+....|. +
T Consensus 234 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~~~~~~~~~gl~~~~~P~i~i~~~~~~y~~~~~~~ 313 (382)
T 2r2j_A 234 EEGLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDKFRHPLLHIQKTPADCPVIAIDSFRHMYVFGDFKD 313 (382)
T ss_dssp TTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTTTHHHHHHTTCCGGGCSEEEEECSSCEEECCCSGG
T ss_pred cCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchHHhHHHHHHcCCCccCCCEEEEEcchhcCCCCcccc
Confidence 4577899999999984 4666667777777778777778888888889999999997 68999988443333332 3
Q ss_pred CCCHHHHHHHHHHhhCCCC
Q 025648 83 SRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 83 ~~~~~~l~~fi~~~~~~~~ 101 (250)
..+.+.|.+|+++.+.-+.
T Consensus 314 ~~~~~~i~~F~~d~~~Gkl 332 (382)
T 2r2j_A 314 VLIPGKLKQFVFDLHSGKL 332 (382)
T ss_dssp GGSTTHHHHHHHHHHHTTT
T ss_pred ccCHHHHHHHHHHHHCCCc
Confidence 3467899999999875443
No 344
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.27 E-value=3.1e-06 Score=63.83 Aligned_cols=43 Identities=16% Similarity=0.295 Sum_probs=36.9
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ +||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 44 F~a--~wC~~C~~~--~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~~~G~ 101 (125)
T 1r26_A 44 FTA--VWCGPCKTI--ERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRVLQLPTFIIARSGK 101 (125)
T ss_dssp EEC--TTCHHHHHT--HHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred EEC--CcCHhHHHH--HHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCcccEEEEEeCCe
Confidence 366 899999999 99999999876 34889999999999997665
No 345
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.22 E-value=1.8e-06 Score=66.00 Aligned_cols=44 Identities=16% Similarity=0.073 Sum_probs=37.8
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHH------------HHHHHHHhhhhHHHHhhhH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFV------------LLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~------------~~~~~i~~fPti~~f~~~~ 173 (250)
.+|+ |||++|+.+ .|.+..+|..|. ..+|+|.++||+++|.+|.
T Consensus 36 ~f~a--~wC~~C~~~--~p~l~~la~~~~~v~~~~vd~~~~~~~~~i~~~Pt~~~~~~G~ 91 (135)
T 2dbc_A 36 HLYR--SSVPMCLVV--NQHLSVLARKFPETKFVKAIVNSCIEHYHDNCLPTIFVYKNGQ 91 (135)
T ss_dssp EECC--TTCHHHHHH--HHHHHHHHHHCSSEEEEEECCSSSCSSCCSSCCSEEEEESSSS
T ss_pred EEEC--CCChHHHHH--HHHHHHHHHHCCCcEEEEEEhhcCcccCCCCCCCEEEEEECCE
Confidence 3467 999999999 999999999872 1689999999999998775
No 346
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.22 E-value=2.4e-05 Score=57.66 Aligned_cols=44 Identities=7% Similarity=-0.110 Sum_probs=36.5
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHH--------------------HHHHHHHHhhhhHHHHhhhH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAF--------------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f--------------------~~~~~~i~~fPti~~f~~~~ 173 (250)
.+++ |||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 35 ~f~a--~wC~~C~~~--~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~~G~ 98 (118)
T 1zma_A 35 FIGR--KTCPYCRKF--AGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDGQ 98 (118)
T ss_dssp EEEC--TTCHHHHHH--HHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEETTE
T ss_pred EEEC--CCCccHHHH--HHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEECCE
Confidence 3467 999999999 99999998765 22789999999999997665
No 347
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=97.21 E-value=0.0029 Score=50.29 Aligned_cols=37 Identities=19% Similarity=0.252 Sum_probs=28.7
Q ss_pred HHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHHHhh
Q 025648 57 ILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVT 97 (250)
Q Consensus 57 l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~~~~ 97 (250)
++.++||.|+||+++ ||+. +.|..+.+.|.+.|.+.+
T Consensus 141 ~a~~~gv~GtPt~vv-nG~~---~~G~~~~~~l~~~i~~~~ 177 (186)
T 3bci_A 141 IAKDNHIKTTPTAFI-NGEK---VEDPYDYESYEKLLKDKI 177 (186)
T ss_dssp HHHHTTCCSSSEEEE-TTEE---CSCTTCHHHHHHHHHC--
T ss_pred HHHHcCCCCCCeEEE-CCEE---cCCCCCHHHHHHHHHHHH
Confidence 356679999999987 7763 468889999999998765
No 348
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.20 E-value=3.6e-06 Score=63.12 Aligned_cols=65 Identities=15% Similarity=0.144 Sum_probs=41.7
Q ss_pred CCCCCCCccccCCCC---CcccccCCCCCCCCCcCCCChhhhcCchHH---HHHHHHH------------------HHHH
Q 025648 102 ASLDKISPDKVGKAS---NHEKHNNTEEESCPFSWARSPENLLQQETY---LALATAF------------------VLLR 157 (250)
Q Consensus 102 ~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~---~~lA~~f------------------~~~~ 157 (250)
..++..++++.+... ...+++ .+++ +||++|+.+ .|.+ ..++..+ ++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv---~f~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~ 81 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFV---DCFT--TWCGPCKRL--SKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKK 81 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEE---EECC--TTCTHHHHH--HHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHhcCCeEEE---EEEC--CCCccHHHH--HHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHH
Confidence 345666776554321 111222 3366 899999999 8877 5555433 2478
Q ss_pred HHHHhhhhHHHH-hhhH
Q 025648 158 LVYIFLPTLLIF-AQFT 173 (250)
Q Consensus 158 ~~i~~fPti~~f-~~~~ 173 (250)
|+|.++||+++| .+|.
T Consensus 82 ~~v~~~Pt~~~~d~~G~ 98 (130)
T 2kuc_A 82 YGVHAYPTLLFINSSGE 98 (130)
T ss_dssp TTCCSSCEEEEECTTSC
T ss_pred cCCCCCCEEEEECCCCc
Confidence 899999999999 4544
No 349
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.19 E-value=6.9e-06 Score=60.80 Aligned_cols=43 Identities=19% Similarity=0.318 Sum_probs=36.5
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ +||++|+.+ .|.+..++..| ++.+|+|.++||+++|.+|.
T Consensus 41 f~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~ 98 (122)
T 2vlu_A 41 FTA--SWCGPCRIM--APVFADLAKKFPNAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGD 98 (122)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred EEC--CCCHHHHHH--HHHHHHHHHHCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEeCCE
Confidence 355 899999999 99999998876 34899999999999997655
No 350
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=97.19 E-value=0.0031 Score=53.83 Aligned_cols=81 Identities=11% Similarity=0.077 Sum_probs=57.6
Q ss_pred eEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEE--cCC---------------CChhHHHhhCCCcc--CeEEEEe
Q 025648 13 YVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIE--ESA---------------IRPSILSKYGVHGF--PTLFLLN 73 (250)
Q Consensus 13 ~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~--d~~---------------~~~~l~~~~~I~~~--PTi~l~~ 73 (250)
..+..|.+++||+|......+++++..+. +..+... +.+ .++.+.+++|.+++ |++++ +
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~~-vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPqI~I-n 121 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKGD-VVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQAIL-N 121 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHTS-SEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSEEEE-T
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccCC-eeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCEEEE-C
Confidence 57888999999999999999999988753 3322332 222 12347788999999 99776 7
Q ss_pred CceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 74 SSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 74 g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
|+. ..|+.+.+.|.+.|.+...
T Consensus 122 g~~---~v~G~d~~~l~~~l~~~~~ 143 (270)
T 2axo_A 122 GRD---HVKGADVRGIYDRLDAFKR 143 (270)
T ss_dssp TTE---EEETTCHHHHHHHHHHHHH
T ss_pred CEE---eecCCCHHHHHHHHHHhhc
Confidence 764 2344578889888876543
No 351
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.18 E-value=6.1e-06 Score=58.69 Aligned_cols=63 Identities=19% Similarity=0.182 Sum_probs=45.4
Q ss_pred CCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHH
Q 025648 103 SLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLL 167 (250)
Q Consensus 103 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~ 167 (250)
.++.+++++.+.. ...... ..++ +||++|+.+ .|.+..++..+ ++.+|+|.++||++
T Consensus 3 ~l~~~~~~~~~~~-~~~~~v---~f~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 74 (104)
T 2e0q_A 3 HLDSKNFDSFLAS-HEIAVV---DFWA--EWCAPCLIL--APIIEELAEDYPQVGFGKLNSDENPDIAARYGVMSLPTVI 74 (104)
T ss_dssp ECCTTTHHHHHHH-SSEEEE---EEEC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSCEEE
T ss_pred ecCHHHHHHHHhc-CCcEEE---EEEC--CCChhHHHH--hHHHHHHHHHcCCceEEEEECCCCHHHHHhCCccccCEEE
Confidence 4566677766532 212222 2355 899999999 99999998876 34889999999999
Q ss_pred HHhhhH
Q 025648 168 IFAQFT 173 (250)
Q Consensus 168 ~f~~~~ 173 (250)
+|.+|.
T Consensus 75 ~~~~g~ 80 (104)
T 2e0q_A 75 FFKDGE 80 (104)
T ss_dssp EEETTE
T ss_pred EEECCe
Confidence 996654
No 352
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.18 E-value=1.5e-05 Score=58.17 Aligned_cols=43 Identities=16% Similarity=0.240 Sum_probs=37.4
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ +||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 31 f~a--~wC~~C~~~--~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 88 (109)
T 3f3q_A 31 FYA--TWCGPCKMI--APMIEKFSEQYPQADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGK 88 (109)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred EEC--CcCHhHHHH--HHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCccCEEEEEECCE
Confidence 366 899999999 99999999876 35899999999999998664
No 353
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.16 E-value=2.1e-05 Score=73.52 Aligned_cols=66 Identities=23% Similarity=0.166 Sum_probs=50.4
Q ss_pred CCCCCCCCccccCCCCCcccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHHH---------------------HHHHH
Q 025648 101 TASLDKISPDKVGKASNHEKHNNTEEESCPFSWARSPENLLQQETYLALATAFV---------------------LLRLV 159 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f~---------------------~~~~~ 159 (250)
+..++.++|+..+......+++ .+|+ +||++|+.+ .|.++.+|..+. +.+|+
T Consensus 14 V~~Lt~~~f~~~v~~~~k~vlV---~FyA--~WC~pCk~~--~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~ 86 (519)
T 3t58_A 14 LTLLDADSVRPTVLGSSSAWAV---EFFA--SWCGHAIAF--APTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFN 86 (519)
T ss_dssp SEEECTTTHHHHHSSCSSEEEE---EEEC--TTSHHHHHH--HHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTT
T ss_pred cEECChHHHHHHHHhCCCeEEE---EEEC--CCCHHHHHH--HHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcC
Confidence 4456778888765443333333 3477 899999999 999999998872 48899
Q ss_pred HHhhhhHHHHhhhH
Q 025648 160 YIFLPTLLIFAQFT 173 (250)
Q Consensus 160 i~~fPti~~f~~~~ 173 (250)
|.++||+++|.+|.
T Consensus 87 V~~~PTl~~f~~g~ 100 (519)
T 3t58_A 87 IAGFPTVRFFQAFT 100 (519)
T ss_dssp CCSBSEEEEECTTC
T ss_pred CcccCEEEEEcCcc
Confidence 99999999998653
No 354
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=97.12 E-value=1.5e-05 Score=61.99 Aligned_cols=44 Identities=7% Similarity=0.006 Sum_probs=38.1
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhhhHHHHhhhH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fPti~~f~~~~ 173 (250)
.+|+ |||++|+.+ .|.+..++..+ +..+|+|.++||+++|.+|.
T Consensus 29 ~F~a--~WC~~C~~~--~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~ 88 (149)
T 3gix_A 29 RFGR--DEDPVCLQL--DDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQ 88 (149)
T ss_dssp EEEC--TTSHHHHHH--HHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTE
T ss_pred EEEC--CCCHHHHHH--HHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCe
Confidence 3477 999999999 99999999876 34899999999999888775
No 355
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=97.11 E-value=0.0051 Score=50.27 Aligned_cols=38 Identities=18% Similarity=0.275 Sum_probs=32.1
Q ss_pred HH-HhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 57 IL-SKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 57 l~-~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
.+ .++||+++||+++ ||+ .+.|..+.+.|.+.|++...
T Consensus 159 ~a~~~~GV~GtPtfvv-ng~---~~~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 159 EAINQYNVSGTPSFMI-DGI---LLAGTHDWASLRPQILARLN 197 (205)
T ss_dssp HHHHHHCCCSSSEEEE-TTE---ECTTCCSHHHHHHHHHHHHT
T ss_pred HHHHHcCCccCCEEEE-CCE---EEeCCCCHHHHHHHHHHHhh
Confidence 45 7889999999987 776 36789999999999998765
No 356
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.11 E-value=1.1e-05 Score=62.72 Aligned_cols=43 Identities=23% Similarity=0.302 Sum_probs=37.2
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ |||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 39 F~a--~wC~~C~~~--~p~l~~l~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 96 (153)
T 2wz9_A 39 FWA--PWAPQCAQM--NEVMAELAKELPQVSFVKLEAEGVPEVSEKYEISSVPTFLFFKNSQ 96 (153)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSSSEEEEEETTE
T ss_pred EEC--CCCHhHHHH--HHHHHHHHHHcCCeEEEEEECCCCHHHHHHcCCCCCCEEEEEECCE
Confidence 366 899999999 99999998875 35889999999999998665
No 357
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.09 E-value=1.4e-05 Score=65.36 Aligned_cols=44 Identities=16% Similarity=0.060 Sum_probs=37.8
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhhhHHHHhhhH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fPti~~f~~~~ 173 (250)
.+++ |||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 120 ~F~a--~wC~~C~~~--~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 179 (210)
T 3apq_A 120 NFYS--PGCSHCHDL--APTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGM 179 (210)
T ss_dssp EEEC--TTCHHHHHH--HHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEECTTS
T ss_pred EEeC--CCChhHHHH--HHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeEEEEECCC
Confidence 3466 899999999 99999999876 35899999999999997655
No 358
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.09 E-value=3.8e-06 Score=61.93 Aligned_cols=43 Identities=9% Similarity=0.209 Sum_probs=36.4
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH--------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF--------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f--------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ +||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 40 f~a--~wC~~C~~~--~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~ 96 (117)
T 2xc2_A 40 FFA--TWCGPCKTI--APLFKELSEKYDAIFVKVDVDKLEETARKYNISAMPTFIAIKNGE 96 (117)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHTTSSSEEEEEETTTSHHHHHHTTCCSSSEEEEEETTE
T ss_pred EEC--CCCHhHHHH--hHHHHHHHHHcCcEEEEEECCccHHHHHHcCCCccceEEEEeCCc
Confidence 366 899999999 99999998764 34889999999999997665
No 359
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=97.09 E-value=1.4e-05 Score=61.57 Aligned_cols=44 Identities=11% Similarity=0.076 Sum_probs=38.1
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHH----------------HHHHHHHhhhhHHHHhhhH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~----------------~~~~~i~~fPti~~f~~~~ 173 (250)
.+++ |||++|+.+ .|.+.+++..+. +.+|+|.++||+++|.+|.
T Consensus 29 ~F~a--~wC~~C~~~--~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~ 88 (142)
T 1qgv_A 29 RFGH--DWDPTCMKM--DEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNK 88 (142)
T ss_dssp EEEC--TTSHHHHHH--HHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTE
T ss_pred EEEC--CCCHHHHHH--HHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEECCc
Confidence 3467 999999999 999999998872 3789999999999998765
No 360
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.06 E-value=2.6e-05 Score=55.73 Aligned_cols=42 Identities=17% Similarity=0.299 Sum_probs=36.9
Q ss_pred CCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 128 SCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 128 ~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
++ +||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 28 ~~--~~C~~C~~~--~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~ 84 (105)
T 3m9j_A 28 SA--TWCGPCKMI--KPFFHSLSEKYSNVIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQ 84 (105)
T ss_dssp EC--TTCHHHHHH--HHHHHHHHHHSTTSEEEEEETTTCHHHHHHTTCCBSSEEEEEETTE
T ss_pred EC--CCChhhHHH--HHHHHHHHHHccCeEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCe
Confidence 55 899999999 99999999886 34899999999999997665
No 361
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.00 E-value=4.4e-05 Score=55.30 Aligned_cols=42 Identities=10% Similarity=0.252 Sum_probs=36.3
Q ss_pred CCCCcCCCChhhhcCchHHHHHHHHHH----------------HHHHHHHhhhhHHHHhhhH
Q 025648 128 SCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 128 ~~~~pw~~~ck~~~~~~~~~~lA~~f~----------------~~~~~i~~fPti~~f~~~~ 173 (250)
++ |||++|+.+ .|.+..++..|- +.+|+|.++||+++|.+|.
T Consensus 32 ~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~ 89 (112)
T 1ep7_A 32 TA--TWCGPCKMI--APLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGV 89 (112)
T ss_dssp EC--TTCHHHHHH--HHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEEEEEETTE
T ss_pred EC--CCCHHHHHH--HHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEEEEEECCe
Confidence 55 899999999 999999998762 4899999999999987665
No 362
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.00055 Score=51.90 Aligned_cols=61 Identities=15% Similarity=0.251 Sum_probs=38.2
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCC----ChhHHHhhCCCccCeEEEEeCce
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAI----RPSILSKYGVHGFPTLFLLNSSM 76 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~----~~~l~~~~~I~~~PTi~l~~g~~ 76 (250)
++.|..+|||+|++....+++....-.....+.++.... ...+.+..|...+|++++ +|+.
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI-~G~~ 80 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLV-NGVS 80 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEE-TTEE
T ss_pred EEEEEcCCCccHHHHHHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEE-CCEE
Confidence 778999999999999988887411111223333322111 122445568999999965 7754
No 363
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=96.96 E-value=3.4e-05 Score=71.08 Aligned_cols=66 Identities=12% Similarity=0.048 Sum_probs=50.0
Q ss_pred CCCCCCCCccccCCCCCc-ccccCCCCCCCCCcCCCChhhhcCchHHHHHHHHH------------------------HH
Q 025648 101 TASLDKISPDKVGKASNH-EKHNNTEEESCPFSWARSPENLLQQETYLALATAF------------------------VL 155 (250)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~pw~~~ck~~~~~~~~~~lA~~f------------------------~~ 155 (250)
+..++.++|+.++..... .+++ .+|+ |||++|+.+ .|.+..+|..| ++
T Consensus 25 V~~Lt~~~F~~~l~~~~~k~VlV---~FyA--~WC~pCk~~--~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la 97 (470)
T 3qcp_A 25 VVDLSGDDFSRVHRVAPLCPWIV---LFYN--DGCGACRRY--ASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLC 97 (470)
T ss_dssp EEECSCSCGGGTCTTGGGSCEEE---EEEC--TTCHHHHHH--HHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHH
T ss_pred cEECCHHHHHHHHHhCCCCeEEE---EEEC--CCCHHHHHH--HHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHH
Confidence 446778888877654321 2233 4477 999999999 99999999865 23
Q ss_pred HHHHHHhhhhHHHHhhhH
Q 025648 156 LRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 156 ~~~~i~~fPti~~f~~~~ 173 (250)
.+|+|.+|||+++|.+|.
T Consensus 98 ~~y~V~~~PTlilf~~gg 115 (470)
T 3qcp_A 98 RKYDINFVPRLFFFYPRD 115 (470)
T ss_dssp HHTTCCSSCEEEEEEESS
T ss_pred HHcCCCccCeEEEEECCC
Confidence 899999999999997554
No 364
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=96.93 E-value=2.8e-05 Score=65.79 Aligned_cols=44 Identities=20% Similarity=0.200 Sum_probs=37.9
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHH--------------HHHHHHHhhhhHHHHhhhH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFV--------------LLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~--------------~~~~~i~~fPti~~f~~~~ 173 (250)
.+|+ |||++|+.+ .|.+..||..|. +.+|+|.++||+++|.+|.
T Consensus 139 ~Fya--~wC~~Ck~l--~p~l~~La~~~~~v~f~kVd~d~~~l~~~~~I~~~PTll~~~~G~ 196 (245)
T 1a0r_P 139 HIYE--DGIKGCDAL--NSSLICLAAEYPMVKFCKIKASNTGAGDRFSSDVLPTLLVYKGGE 196 (245)
T ss_dssp EEEC--TTSTTHHHH--HHHHHHHHHHCTTSEEEEEEHHHHCCTTSSCTTTCSEEEEEETTE
T ss_pred EEEC--CCChHHHHH--HHHHHHHHHHCCCCEEEEEeCCcHHHHHHCCCCCCCEEEEEECCE
Confidence 4477 999999999 999999999872 2579999999999998775
No 365
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=96.86 E-value=0.0029 Score=53.04 Aligned_cols=90 Identities=16% Similarity=0.213 Sum_probs=66.3
Q ss_pred CCeEEEEEEcCCChh----HHhhhHHHHHHHHHcCCC---CEEEEEcCCCChhHHHhhCC----CccCeEEEEe-CceeE
Q 025648 11 HEYVAVLFYASWCPF----SRNFRPSFSVLSSLYSSI---PHFAIEESAIRPSILSKYGV----HGFPTLFLLN-SSMRV 78 (250)
Q Consensus 11 ~~~vlV~Fya~wC~~----C~~~~p~~e~la~~~~~~---~~v~~~d~~~~~~l~~~~~I----~~~PTi~l~~-g~~~~ 78 (250)
+.+++|.|+.+.+.. ...+...+.++|+.|++. ..+..+|++....+.+.||+ ..+|++++++ .+...
T Consensus 129 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~ky 208 (252)
T 2h8l_A 129 GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKF 208 (252)
T ss_dssp SSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSCEE
T ss_pred CCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCcEe
Confidence 446677777554321 224778888899999764 77777788888889999999 3699999993 33445
Q ss_pred EEeCCCCHHH--HHHHHHHhhCCC
Q 025648 79 RYHGSRTLDS--LVAFYSDVTGMN 100 (250)
Q Consensus 79 ~~~G~~~~~~--l~~fi~~~~~~~ 100 (250)
.+.+..+.+. |.+|+++.+.-+
T Consensus 209 ~~~~~~t~~~~~i~~F~~~~~~Gk 232 (252)
T 2h8l_A 209 VMQEEFSRDGKALERFLQDYFDGN 232 (252)
T ss_dssp ECCSCCCTTSHHHHHHHHHHHHTC
T ss_pred cCCcccCcchHHHHHHHHHHHCCC
Confidence 5667778888 999999987543
No 366
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.85 E-value=0.0011 Score=54.99 Aligned_cols=72 Identities=17% Similarity=0.298 Sum_probs=45.3
Q ss_pred CeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHH
Q 025648 12 EYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVA 91 (250)
Q Consensus 12 ~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~ 91 (250)
...++.|..+||++|++....+++..-.| ..+.+.......++.+.+|..++|++++ +|+.+ | ..++|.+
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~~i~~---~~~~i~~~~~~~~l~~~~g~~~vP~~~~-~g~~i----~--g~~~i~~ 238 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDKGLSF---EEIILGHDATIVSVRAVSGRTTVPQVFI-GGKHI----G--GSDDLEK 238 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHTCCC---EEEETTTTCCHHHHHHHTCCSSSCEEEE-TTEEE----E--SHHHHHH
T ss_pred cceEEEEECCCChHHHHHHHHHHHcCCce---EEEECCCchHHHHHHHHhCCCCcCEEEE-CCEEE----E--CHHHHHH
Confidence 34577889999999999999888753222 2222221112245888899999999854 66432 2 3455655
Q ss_pred HH
Q 025648 92 FY 93 (250)
Q Consensus 92 fi 93 (250)
++
T Consensus 239 ~l 240 (241)
T 1nm3_A 239 YF 240 (241)
T ss_dssp C-
T ss_pred Hh
Confidence 44
No 367
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=96.81 E-value=5.1e-05 Score=55.88 Aligned_cols=43 Identities=14% Similarity=0.175 Sum_probs=36.4
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ |||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 37 F~a--~wC~~C~~~--~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 94 (114)
T 2oe3_A 37 FYA--TWCGPCKMM--QPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQ 94 (114)
T ss_dssp EEC--TTCHHHHHT--HHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSBSEEEEEETTE
T ss_pred EEC--CCCHHHHHH--HHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCcccEEEEEeCCe
Confidence 356 899999999 99999998875 34889999999999887655
No 368
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=96.80 E-value=0.00019 Score=48.38 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=33.8
Q ss_pred CCCCcCCCChhhhcCchHHHHHHHHH-------------HHHHHHHHhhhhHHHHhhhH
Q 025648 128 SCPFSWARSPENLLQQETYLALATAF-------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 128 ~~~~pw~~~ck~~~~~~~~~~lA~~f-------------~~~~~~i~~fPti~~f~~~~ 173 (250)
++ +||++|+.+ .|.+..++..+ +..+|+|.++||+++ +|.
T Consensus 7 ~a--~wC~~C~~~--~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~Pt~~~--~G~ 59 (77)
T 1ilo_A 7 YG--TGCANCQML--EKNAREAVKELGIDAEFEKIKEMDQILEAGLTALPGLAV--DGE 59 (77)
T ss_dssp EC--SSSSTTHHH--HHHHHHHHHHTTCCEEEEEECSHHHHHHHTCSSSSCEEE--TTE
T ss_pred Ec--CCChhHHHH--HHHHHHHHHHcCCceEEEEecCHHHHHHCCCCcCCEEEE--CCE
Confidence 55 899999999 99999988876 358999999999988 554
No 369
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=96.75 E-value=7.3e-05 Score=53.35 Aligned_cols=43 Identities=14% Similarity=0.284 Sum_probs=36.8
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ +||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 27 f~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~ 85 (106)
T 1xwb_A 27 FFA--TWCGPCKMI--SPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGV 85 (106)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred EEC--CcCHHHHHh--hHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEEcCCc
Confidence 355 899999999 99999999887 34889999999999987665
No 370
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.74 E-value=6.2e-05 Score=56.26 Aligned_cols=43 Identities=16% Similarity=0.245 Sum_probs=36.8
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ +||++|+.+ .|.+..++..| ++.+|+|.++||+++|.+|.
T Consensus 45 f~a--~wC~~C~~~--~~~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~ 102 (124)
T 1xfl_A 45 FTA--SWCGPCRFI--APFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGK 102 (124)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHHHCSSEEEEEEETTTSHHHHHHTTCCSSSEEEEEETTE
T ss_pred EEC--CCCHHHHHH--HHHHHHHHHHCCCcEEEEEECccCHHHHHHcCCCccCEEEEEECCE
Confidence 356 899999999 99999999875 34889999999999997665
No 371
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=96.73 E-value=0.0033 Score=52.11 Aligned_cols=87 Identities=18% Similarity=0.315 Sum_probs=62.2
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcCC--CCEEEEE-c--------------------------CCCChhHHH
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYSS--IPHFAIE-E--------------------------SAIRPSILS 59 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~~--~~~v~~~-d--------------------------~~~~~~l~~ 59 (250)
.++.+++.|| +.||+.|......|++..++|.. ...+++- | +|...++++
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~ 134 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIAR 134 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHHHH
Confidence 5678999999 99999999999999999998875 3344441 0 123467899
Q ss_pred hhCCC----ccC--eEEEE--eCceeEEEe----CCCCHHHHHHHHHHh
Q 025648 60 KYGVH----GFP--TLFLL--NSSMRVRYH----GSRTLDSLVAFYSDV 96 (250)
Q Consensus 60 ~~~I~----~~P--Ti~l~--~g~~~~~~~----G~~~~~~l~~fi~~~ 96 (250)
.|||- +++ .++++ +|.....+. -.++.+++++.|+.+
T Consensus 135 ~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 135 SYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHh
Confidence 99983 333 46666 555444332 257899999988865
No 372
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.72 E-value=6.5e-05 Score=54.74 Aligned_cols=43 Identities=12% Similarity=0.213 Sum_probs=36.6
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ +||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 33 f~a--~~C~~C~~~--~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~ 90 (112)
T 1syr_A 33 FFA--EWCGPCKRI--APFYEECSKTYTKMVFIKVDVDEVSEVTEKENITSMPTFKVYKNGS 90 (112)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTCCSSSEEEEEETTE
T ss_pred EEC--CCCHHHHHH--HHHHHHHHHHcCCCEEEEEECCCCHHHHHHcCCCcccEEEEEECCc
Confidence 356 899999999 99999998875 34889999999999987665
No 373
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=96.69 E-value=0.021 Score=46.20 Aligned_cols=43 Identities=16% Similarity=0.199 Sum_probs=35.1
Q ss_pred hHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 56 SILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 56 ~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
..+.++||.|+||+++. +|+......|..+.+.+.+.|++.+.
T Consensus 160 ~~a~~~gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~~ 203 (208)
T 3kzq_A 160 SLAKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERII 203 (208)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHHH
T ss_pred HHHHHcCCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHHh
Confidence 45667899999999998 56666677788899999999988763
No 374
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.69 E-value=5.7e-05 Score=62.59 Aligned_cols=44 Identities=23% Similarity=0.184 Sum_probs=37.3
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHH--------------HHHHHHHhhhhHHHHhhhH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFV--------------LLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~--------------~~~~~i~~fPti~~f~~~~ 173 (250)
.+|+ |||++|+.+ .|.+..||..|- +.+|+|.++||+++|.+|.
T Consensus 126 ~F~a--~wC~~C~~l--~p~l~~la~~~~~v~f~~vd~~~~~l~~~~~i~~~PTl~~~~~G~ 183 (217)
T 2trc_P 126 NIYE--DGVRGCDAL--NSSLECLAAEYPMVKFCKIRASNTGAGDRFSSDVLPTLLVYKGGE 183 (217)
T ss_dssp EEEC--TTSTTHHHH--HHHHHHHHTTCTTSEEEEEEHHHHTCSTTSCGGGCSEEEEEETTE
T ss_pred EEEC--CCCccHHHH--HHHHHHHHHHCCCeEEEEEECCcHHHHHHCCCCCCCEEEEEECCE
Confidence 3467 999999999 999999998751 2589999999999998775
No 375
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.68 E-value=0.00013 Score=52.64 Aligned_cols=42 Identities=19% Similarity=0.316 Sum_probs=36.3
Q ss_pred CCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 128 SCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 128 ~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
++ +||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 34 ~~--~~C~~C~~~--~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~ 90 (113)
T 1ti3_A 34 TA--SWCPPCKMI--APIFAELAKKFPNVTFLKVDVDELKAVAEEWNVEAMPTFIFLKDGK 90 (113)
T ss_dssp EC--SSCHHHHHH--HHHHHHHHHHCSSEEEEEEETTTCHHHHHHHHCSSTTEEEEEETTE
T ss_pred EC--CCCHHHHHH--HHHHHHHHHhCCCcEEEEEEccccHHHHHhCCCCcccEEEEEeCCE
Confidence 55 899999999 99999998875 35899999999999997665
No 376
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=96.66 E-value=7.3e-05 Score=56.57 Aligned_cols=43 Identities=14% Similarity=0.270 Sum_probs=36.8
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ +||++|+.+ .|.+..++..+ ++.+|+|.++||++++.+|.
T Consensus 53 f~a--~wC~~C~~~--~~~l~~l~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~ 110 (139)
T 3d22_A 53 FSA--RWCGPSRQI--APYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQ 110 (139)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCEESEEEEEETTE
T ss_pred EEC--CCCHHHHHH--HHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCCCcccEEEEEcCCe
Confidence 366 899999999 99999999876 34899999999999997665
No 377
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.62 E-value=0.00014 Score=53.86 Aligned_cols=42 Identities=10% Similarity=0.210 Sum_probs=35.5
Q ss_pred CCCCcCCCChhhhcCchHHHHHHHHH-----------------HHHHHHHHhhhhHHHHhhhH
Q 025648 128 SCPFSWARSPENLLQQETYLALATAF-----------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 128 ~~~~pw~~~ck~~~~~~~~~~lA~~f-----------------~~~~~~i~~fPti~~f~~~~ 173 (250)
++ +||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 41 ~a--~~C~~C~~~--~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~~G~ 99 (121)
T 2j23_A 41 WA--TWCGPCKMI--GPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFFKNGQ 99 (121)
T ss_dssp EC--TTCSTHHHH--HHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEEEETTE
T ss_pred EC--CCCHhHHHH--HHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEEEECCe
Confidence 55 899999999 99999888765 24889999999999997665
No 378
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=96.59 E-value=0.018 Score=46.14 Aligned_cols=86 Identities=9% Similarity=0.231 Sum_probs=56.3
Q ss_pred CCCeEEEEEE-cCCChhHH-hhhHHHHHHHHHc-C--CCC-EEEEE-c--------------------CCCChhHHHhhC
Q 025648 10 SHEYVAVLFY-ASWCPFSR-NFRPSFSVLSSLY-S--SIP-HFAIE-E--------------------SAIRPSILSKYG 62 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~-~~~p~~e~la~~~-~--~~~-~v~~~-d--------------------~~~~~~l~~~~~ 62 (250)
.++.+++.|| +.|||.|. ...+.|++..+++ . +.. .+++- | +|.+.++++.||
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yG 121 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFTDSMN 121 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHHHHhC
Confidence 4667777676 78999999 8899999999888 4 443 44431 1 123357888888
Q ss_pred CC------c-----cCeEEEE-eCceeEEEeCC-------------CCHHHHHHHHHH
Q 025648 63 VH------G-----FPTLFLL-NSSMRVRYHGS-------------RTLDSLVAFYSD 95 (250)
Q Consensus 63 I~------~-----~PTi~l~-~g~~~~~~~G~-------------~~~~~l~~fi~~ 95 (250)
+. + ..+.+++ +|.....+... .+.+++.+.|++
T Consensus 122 v~~~~~~~G~g~~~~R~tfvIddG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~ 179 (182)
T 1xiy_A 122 MLVDKSNFFMGMRPWRFVAIVENNILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKN 179 (182)
T ss_dssp CEEECGGGTCCEEECCEEEEEETTEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHC
T ss_pred CceeccccCCCCceEEEEEEEcCCEEEEEEEeCCcccccccCcccCCCHHHHHHHHHh
Confidence 73 2 3456666 66655555322 457788777753
No 379
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=96.59 E-value=0.00023 Score=48.64 Aligned_cols=41 Identities=10% Similarity=-0.045 Sum_probs=34.4
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHHH----------------HHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f~----------------~~~~~i~~fPti~~f~~~~ 173 (250)
+++ |||++|+.+ .|.+..++..+- ..+|+|.++||+++ +|.
T Consensus 8 f~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~ 64 (85)
T 1nho_A 8 FTS--PTCPYCPMA--IEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGV 64 (85)
T ss_dssp ESC--SSSCCSTTH--HHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTT
T ss_pred EEC--CCCcchHHH--HHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE--CCE
Confidence 355 899999999 999999998762 38899999999988 554
No 380
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.59 E-value=6.6e-05 Score=56.93 Aligned_cols=43 Identities=7% Similarity=-0.082 Sum_probs=36.4
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH-----------------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF-----------------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f-----------------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+|+ +||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 38 F~a--~wC~~C~~~--~p~l~~l~~~~~v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~~~G~ 103 (135)
T 3emx_A 38 VYS--KTCPHCHRD--WPQLIQASKEVDVPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFYKEGR 103 (135)
T ss_dssp EEE--TTCHHHHHH--HHHHHHHHTTCCSCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEEETTE
T ss_pred EEC--CcCHhhhHh--ChhHHHHHHHCCCEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEEcCCE
Confidence 466 899999999 99999988753 23799999999999999765
No 381
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=96.55 E-value=0.00011 Score=53.52 Aligned_cols=42 Identities=19% Similarity=0.280 Sum_probs=36.1
Q ss_pred CCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 128 SCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 128 ~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+. +||++|+.+ .|.+..++..| ++.+|+|.++||+++|.+|.
T Consensus 36 ~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~ 92 (118)
T 2vm1_A 36 TA--SWCGPCRVI--APVFAEYAKKFPGAIFLKVDVDELKDVAEAYNVEAMPTFLFIKDGE 92 (118)
T ss_dssp EC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSBSEEEEEETTE
T ss_pred EC--CCCHhHHHH--hHHHHHHHHHCCCcEEEEEEcccCHHHHHHcCCCcCcEEEEEeCCe
Confidence 55 899999999 99999999875 24889999999999997655
No 382
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=96.52 E-value=0.0079 Score=41.72 Aligned_cols=55 Identities=20% Similarity=0.311 Sum_probs=37.1
Q ss_pred EEEEEcC----CChhHHhhhHHHHHHHHHcCCCCEEEEEcCC-----CC----hhHHHhhCCC-----ccCeEEEEeCc
Q 025648 15 AVLFYAS----WCPFSRNFRPSFSVLSSLYSSIPHFAIEESA-----IR----PSILSKYGVH-----GFPTLFLLNSS 75 (250)
Q Consensus 15 lV~Fya~----wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~-----~~----~~l~~~~~I~-----~~PTi~l~~g~ 75 (250)
++.|+.+ |||+|++....+++. ++. +...|.+ .+ .++.+..|.. ++|++++=+|+
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~-----gi~-y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i~~g~ 74 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK-----KQP-FEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGS 74 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT-----TCC-EEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc-----CCC-EEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEEECCE
Confidence 5678899 999999999888764 222 2233333 33 3467788888 89997641444
No 383
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=96.49 E-value=0.00012 Score=51.95 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=36.1
Q ss_pred CCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhhhH
Q 025648 128 SCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 128 ~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~~~ 173 (250)
++ +||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+|.
T Consensus 27 ~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~ 83 (104)
T 2vim_A 27 FA--QWCGPCRNI--APKVEALAKEIPEVEFAKVDVDQNEEAAAKYSVTAMPTFVFIKDGK 83 (104)
T ss_dssp EC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred EC--CCCHHHHHh--hHHHHHHHHHCCCCEEEEEeccCCHHHHHHcCCccccEEEEEeCCc
Confidence 55 899999999 99999998876 34889999999999987665
No 384
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=96.49 E-value=0.0032 Score=48.14 Aligned_cols=50 Identities=18% Similarity=0.292 Sum_probs=33.1
Q ss_pred CCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCCh----hHHHhhCCCccCeEEEEeCcee
Q 025648 21 SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKYGVHGFPTLFLLNSSMR 77 (250)
Q Consensus 21 ~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~----~l~~~~~I~~~PTi~l~~g~~~ 77 (250)
||||+|++....+++. ++. +..+|.+.++ .+.+..|..++|++++ +|+.+
T Consensus 48 ~~Cp~C~~ak~~L~~~-----gv~-y~~vdI~~d~~~~~~L~~~~G~~tvP~VfI-~G~~i 101 (135)
T 2wci_A 48 PSCGFSAQAVQALAAC-----GER-FAYVDILQNPDIRAELPKYANWPTFPQLWV-DGELV 101 (135)
T ss_dssp BSSHHHHHHHHHHHTT-----CSC-CEEEEGGGCHHHHHHHHHHHTCCSSCEEEE-TTEEE
T ss_pred CCCccHHHHHHHHHHc-----CCc-eEEEECCCCHHHHHHHHHHHCCCCcCEEEE-CCEEE
Confidence 9999999999888765 332 2333444444 4455568899998754 77543
No 385
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=96.45 E-value=0.00011 Score=54.39 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=35.6
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH---------------HHHHHHHHhhhhHHHHhh
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF---------------VLLRLVYIFLPTLLIFAQ 171 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f---------------~~~~~~i~~fPti~~f~~ 171 (250)
+++ +||++|+.+ .|.+..++..+ ++.+|+|.++||+++|.+
T Consensus 30 f~a--~wC~~C~~~--~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~ 85 (118)
T 2f51_A 30 FFA--TWCGPCQRL--GQILPSIAEANKDVTFIKVDVDKNGNAADAYGVSSIPALFFVKK 85 (118)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEEE
T ss_pred EEC--CCCHHHHHH--HHHHHHHHHHCCCeEEEEEECCCCHHHHHhcCCCCCCEEEEEeC
Confidence 356 899999999 99999999875 348999999999999976
No 386
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=96.45 E-value=5.1e-05 Score=57.52 Aligned_cols=41 Identities=12% Similarity=0.222 Sum_probs=34.7
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHH--------------HHHHHHHHhhhhHHHHh
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAF--------------VLLRLVYIFLPTLLIFA 170 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f--------------~~~~~~i~~fPti~~f~ 170 (250)
.+++ +||++|+.+ .|.+..++..| ++.+|+|.++||+++|.
T Consensus 46 ~F~a--~wC~~C~~~--~p~l~~l~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 100 (133)
T 3cxg_A 46 KFGA--VWCKPCNKI--KEYFKNQLNYYYVTLVDIDVDIHPKLNDQHNIKALPTFEFYF 100 (133)
T ss_dssp EEEC--TTCHHHHHT--HHHHHGGGGTEECEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred EEEC--CCCHHHHHH--HHHHHHHHHhcCEEEEEEeccchHHHHHhcCCCCCCEEEEEE
Confidence 3467 899999999 99999888754 34889999999999985
No 387
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=96.45 E-value=0.032 Score=46.57 Aligned_cols=90 Identities=13% Similarity=0.168 Sum_probs=65.7
Q ss_pred CCeEEEEEEcC-CC---h-hHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCc--cC-eEEEEe-CceeEEEe
Q 025648 11 HEYVAVLFYAS-WC---P-FSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHG--FP-TLFLLN-SSMRVRYH 81 (250)
Q Consensus 11 ~~~vlV~Fya~-wC---~-~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~--~P-Ti~l~~-g~~~~~~~ 81 (250)
+++.++.|+.+ .+ . ....+...+.++|+.|+ ...+..+|.+......+.||+.. +| .+++++ .+....+.
T Consensus 132 ~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~~ky~~~ 210 (250)
T 3ec3_A 132 KRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDESGKKFAME 210 (250)
T ss_dssp SSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTTSCEEECC
T ss_pred cCccEEEEEecccccccchhHHHHHHHHHHHHHhhc-ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCCceecCC
Confidence 56777777753 22 3 34557899999999999 66677778888888889999974 44 666663 33344444
Q ss_pred -CCCCHHHHHHHHHHhhCCCC
Q 025648 82 -GSRTLDSLVAFYSDVTGMNT 101 (250)
Q Consensus 82 -G~~~~~~l~~fi~~~~~~~~ 101 (250)
+..+.+.|.+|+++.+.-+.
T Consensus 211 ~~~~t~~~i~~Fv~~~~~Gkl 231 (250)
T 3ec3_A 211 PEEFDSDALREFVMAFKKGKL 231 (250)
T ss_dssp CCSCCHHHHHHHHHHHHTTCC
T ss_pred cccCCHHHHHHHHHHHHCCCc
Confidence 57899999999999876554
No 388
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=96.37 E-value=0.0058 Score=43.08 Aligned_cols=56 Identities=7% Similarity=0.022 Sum_probs=36.7
Q ss_pred EEEEEcCCChhH------HhhhHHHHHHHHHcCCCCEEEEEcCCCCh----hHHHhhC--CCccCeEEEEeCcee
Q 025648 15 AVLFYASWCPFS------RNFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKYG--VHGFPTLFLLNSSMR 77 (250)
Q Consensus 15 lV~Fya~wC~~C------~~~~p~~e~la~~~~~~~~v~~~d~~~~~----~l~~~~~--I~~~PTi~l~~g~~~ 77 (250)
++.|+.+|||+| ++....+++. ++. +...|.+.++ .+.+.+| ...+|++++ +|+.+
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~~-----~i~-~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi-~g~~i 71 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDGK-----RIQ-YQLVDISQDNALRDEMRTLAGNPKATPPQIVN-GNHYC 71 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHHT-----TCC-CEEEETTSCHHHHHHHHHHTTCTTCCSCEEEE-TTEEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHHC-----CCc-eEEEECCCCHHHHHHHHHHhCCCCCCCCEEEE-CCEEE
Confidence 677899999999 7777666642 332 3333444443 4556778 779998854 76543
No 389
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=96.25 E-value=0.00023 Score=48.63 Aligned_cols=40 Identities=10% Similarity=0.102 Sum_probs=33.8
Q ss_pred CCCCcCCCChhhhcCchHHHHHHHHHH----------------HHHHHHHhhhhHHHHhhhH
Q 025648 128 SCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 128 ~~~~pw~~~ck~~~~~~~~~~lA~~f~----------------~~~~~i~~fPti~~f~~~~ 173 (250)
++ +||++|+.+ .|.+..++..+- ..+|+|.++||+++ +|.
T Consensus 10 ~~--~~C~~C~~~--~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~ 65 (85)
T 1fo5_A 10 TS--PMCPHCPAA--KRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGD 65 (85)
T ss_dssp EC--CCSSCCCTH--HHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTE
T ss_pred eC--CCCCchHHH--HHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE--CCE
Confidence 55 899999999 999999988762 38899999999988 544
No 390
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=96.23 E-value=8.2e-05 Score=64.46 Aligned_cols=38 Identities=13% Similarity=0.087 Sum_probs=30.6
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHH----------------HHHHHHHHhhhhHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAF----------------VLLRLVYIFLPTLL 167 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f----------------~~~~~~i~~fPti~ 167 (250)
.+++ |||+||+++ .|.++++|..+ ++.+++|++|||+.
T Consensus 203 ~F~A--~WC~~Ck~l--~p~le~lA~~l~~Vd~d~~d~~~~~~~la~~~gI~~vPT~~ 256 (291)
T 3kp9_A 203 MYGA--YWCPHCQDQ--KELFGAAFDQVPYVECSPNGPGTPQAQECTEAGITSYPTWI 256 (291)
T ss_dssp EEEC--TTCHHHHHH--HHHHGGGGGGSCEEESCSSCSSSCCCHHHHTTTCCSTTEEE
T ss_pred EEEC--CCCHHHHHH--HHHHHHHHHHcCEEEEeecCchhhHHHHHHHcCCcccCeEE
Confidence 3466 999999999 99999988543 24689999999943
No 391
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=96.01 E-value=0.00039 Score=52.02 Aligned_cols=43 Identities=7% Similarity=0.080 Sum_probs=35.8
Q ss_pred CCCCCcCCCChhhhcCchHHH--HHHHHH-------------------HHHHHHH---HhhhhHHHH-hhhH
Q 025648 127 ESCPFSWARSPENLLQQETYL--ALATAF-------------------VLLRLVY---IFLPTLLIF-AQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~--~lA~~f-------------------~~~~~~i---~~fPti~~f-~~~~ 173 (250)
+++ +||++|+.+ .|.+. .++..+ +..+|+| .++||+++| .+|.
T Consensus 36 f~a--~wC~~C~~~--~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~ 103 (133)
T 3fk8_A 36 FGA--NWCTDCRAL--DKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGK 103 (133)
T ss_dssp EEC--TTCHHHHHH--HHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSC
T ss_pred EcC--CCCHHHHHH--HHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCC
Confidence 366 899999999 89888 888766 2389999 999999999 6664
No 392
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.00 E-value=0.011 Score=43.38 Aligned_cols=57 Identities=18% Similarity=0.179 Sum_probs=36.7
Q ss_pred EEEEEEcCCChhHH------hhhHHHHHHHHHcCCCCEEEEEcCCCChh----HHHhh--------CCCccCeEEEEeCc
Q 025648 14 VAVLFYASWCPFSR------NFRPSFSVLSSLYSSIPHFAIEESAIRPS----ILSKY--------GVHGFPTLFLLNSS 75 (250)
Q Consensus 14 vlV~Fya~wC~~C~------~~~p~~e~la~~~~~~~~v~~~d~~~~~~----l~~~~--------~I~~~PTi~l~~g~ 75 (250)
-++.|+.++|++|+ +....+++. ++ .+...|.+.+++ +.+.+ |...+|++++ +|+
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~-----gi-~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vfi-~g~ 81 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEAN-----KI-EFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIFN-GDR 81 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-----TC-CEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEEE-TTE
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHc-----CC-CEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEEE-CCE
Confidence 46788999999999 666666642 33 334445555543 44554 7778898754 665
Q ss_pred ee
Q 025648 76 MR 77 (250)
Q Consensus 76 ~~ 77 (250)
.+
T Consensus 82 ~i 83 (111)
T 2ct6_A 82 YC 83 (111)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 393
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=95.98 E-value=0.011 Score=43.36 Aligned_cols=67 Identities=18% Similarity=0.334 Sum_probs=41.3
Q ss_pred EEEEEc-----CCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChh----HHHhhCCCccCeEEEEeCceeEEEeCCCC
Q 025648 15 AVLFYA-----SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPS----ILSKYGVHGFPTLFLLNSSMRVRYHGSRT 85 (250)
Q Consensus 15 lV~Fya-----~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~----l~~~~~I~~~PTi~l~~g~~~~~~~G~~~ 85 (250)
+|.|.. +|||+|++....+++. ++. +...|.+.+++ +.+..|...+|++++ +|+.+ |+
T Consensus 18 Vvlf~kg~~~~~~Cp~C~~ak~~L~~~-----gi~-y~~~di~~d~~~~~~l~~~~g~~tvP~ifi-~g~~i----GG-- 84 (111)
T 3zyw_A 18 CMLFMKGTPQEPRCGFSKQMVEILHKH-----NIQ-FSSFDIFSDEEVRQGLKAYSSWPTYPQLYV-SGELI----GG-- 84 (111)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHHT-----TCC-CEEEEGGGCHHHHHHHHHHHTCCSSCEEEE-TTEEE----EC--
T ss_pred EEEEEecCCCCCcchhHHHHHHHHHHc-----CCC-eEEEECcCCHHHHHHHHHHHCCCCCCEEEE-CCEEE----ec--
Confidence 456777 9999999999888864 222 22223333443 344458889999865 76433 33
Q ss_pred HHHHHHHHH
Q 025648 86 LDSLVAFYS 94 (250)
Q Consensus 86 ~~~l~~fi~ 94 (250)
.+++.++.+
T Consensus 85 ~d~l~~l~~ 93 (111)
T 3zyw_A 85 LDIIKELEA 93 (111)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 355665544
No 394
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=95.87 E-value=0.012 Score=46.54 Aligned_cols=40 Identities=15% Similarity=0.290 Sum_probs=32.7
Q ss_pred CCCeEEEEEEcCCChhHHhhhHHH-HHHHHHcCCCCEEEEE
Q 025648 10 SHEYVAVLFYASWCPFSRNFRPSF-SVLSSLYSSIPHFAIE 49 (250)
Q Consensus 10 ~~~~vlV~Fya~wC~~C~~~~p~~-e~la~~~~~~~~v~~~ 49 (250)
..++++|.||..+||+|..+.+.+ .++.+.+++.+.+...
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~ 56 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPF 56 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEE
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEE
Confidence 356789999999999999999999 9999998764444443
No 395
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=95.67 E-value=0.00014 Score=57.14 Aligned_cols=19 Identities=5% Similarity=-0.001 Sum_probs=15.4
Q ss_pred HHHHHHHhhhhHHHH-hhhH
Q 025648 155 LLRLVYIFLPTLLIF-AQFT 173 (250)
Q Consensus 155 ~~~~~i~~fPti~~f-~~~~ 173 (250)
..+|+|.++||++++ ++|.
T Consensus 123 ~~~~~v~~~Pt~~lid~~G~ 142 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDNEGN 142 (172)
T ss_dssp HHHHSCCCSSEEEEECTTSC
T ss_pred HHHcCCCCcceEEEECCCCC
Confidence 357999999999999 5554
No 396
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=95.63 E-value=0.0005 Score=51.80 Aligned_cols=43 Identities=23% Similarity=0.337 Sum_probs=33.9
Q ss_pred CCCCCcCCCChhhhcCchHH---HHHHHHH-------------------HHHHHHHHhhhhHHHH-hhhH
Q 025648 127 ESCPFSWARSPENLLQQETY---LALATAF-------------------VLLRLVYIFLPTLLIF-AQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~---~~lA~~f-------------------~~~~~~i~~fPti~~f-~~~~ 173 (250)
+++ +||++|+.+ .|.+ ..++..+ ++.+|+|.++||+++| .+|.
T Consensus 38 F~a--~wC~~C~~~--~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~ 103 (134)
T 2fwh_A 38 LYA--DWCVACKEF--EKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQ 103 (134)
T ss_dssp EEC--TTCHHHHHH--HHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTCCSSSEEEEECTTSC
T ss_pred EEC--CCCHHHHHH--HHHhcCCHHHHHHhcCcEEEEEeCCCCcchHHHHHHHcCCCCCCEEEEECCCCC
Confidence 366 899999998 7777 6666654 2478999999999999 6655
No 397
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=95.62 E-value=0.026 Score=41.94 Aligned_cols=51 Identities=18% Similarity=0.273 Sum_probs=32.2
Q ss_pred CCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChh----HHHhhCCCccCeEEEEeCcee
Q 025648 21 SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPS----ILSKYGVHGFPTLFLLNSSMR 77 (250)
Q Consensus 21 ~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~----l~~~~~I~~~PTi~l~~g~~~ 77 (250)
||||+|++....+++.. +..+...|.+.+++ +.+..|...+|++++ +|+.+
T Consensus 33 p~Cp~C~~ak~lL~~~g-----v~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vfI-~g~~I 87 (118)
T 2wem_A 33 PQCGFSNAVVQILRLHG-----VRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYL-NGEFV 87 (118)
T ss_dssp BSSHHHHHHHHHHHHTT-----CCCCEEEESSSCHHHHHHHHHHHTCCSSCEEEE-TTEEE
T ss_pred CccHHHHHHHHHHHHcC-----CCCCEEEEcCCCHHHHHHHHHHhCCCCcCeEEE-CCEEE
Confidence 59999999998888652 21122334344443 344458889999855 77543
No 398
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=95.59 E-value=0.0047 Score=54.84 Aligned_cols=61 Identities=15% Similarity=0.313 Sum_probs=38.2
Q ss_pred EEEEEcCCChhHHhhhH-HHHHHHHHcCCCCEEEEEcCCCC----hhHHHhhCCCccCeEEEEeCce
Q 025648 15 AVLFYASWCPFSRNFRP-SFSVLSSLYSSIPHFAIEESAIR----PSILSKYGVHGFPTLFLLNSSM 76 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p-~~e~la~~~~~~~~v~~~d~~~~----~~l~~~~~I~~~PTi~l~~g~~ 76 (250)
++.|..+|||+|++... .+++..-.|..+..+.+++.+.. ..|.+..|.+.+|++++ +|+.
T Consensus 263 VvVYsk~~CPyC~~Ak~~LL~~~gV~y~eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVFI-~Gk~ 328 (362)
T 2jad_A 263 IFVASKTYCPYSHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYI-NGKH 328 (362)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTTCCCTTTEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEEE-TTEE
T ss_pred EEEEEcCCCcchHHHHHHHHHHcCCCcceEEEEEeccccCCHHHHHHHHHHHCCCCcCEEEE-CCEE
Confidence 66799999999999875 45554333332223333332222 34566789999999864 7753
No 399
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=95.37 E-value=0.39 Score=34.63 Aligned_cols=84 Identities=13% Similarity=0.160 Sum_probs=71.1
Q ss_pred EEEEEEcCCChhHHhhhHHHHHHHHH-c-CCCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHH
Q 025648 14 VAVLFYASWCPFSRNFRPSFSVLSSL-Y-SSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVA 91 (250)
Q Consensus 14 vlV~Fya~wC~~C~~~~p~~e~la~~-~-~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~ 91 (250)
....|.|..-+.+++....+.++-+. + ++...+.++|..+++++++.++|-.+||++=....++.+..|.-=.+.|..
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eqPeLAE~~~IvATPTLIK~~P~P~rriiGd~i~~ql~~ 92 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQPQLVEYYRLVVTPALVKIGPGSRQVLSGIDLTDQLAN 92 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTCHHHHHHTTCCSSSEEEEEESSSCEEEESSCHHHHHHH
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccCHHHHhHcCeeeccHhhccCCCCceEEeChHHHHHHHH
Confidence 44578888889999988888886655 4 457889999999999999999999999999887788899999988899998
Q ss_pred HHHHhh
Q 025648 92 FYSDVT 97 (250)
Q Consensus 92 fi~~~~ 97 (250)
|.-+-.
T Consensus 93 wwprWq 98 (105)
T 1t4y_A 93 QLPQWL 98 (105)
T ss_dssp HHHHHH
T ss_pred HhHHHH
Confidence 876643
No 400
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=95.35 E-value=0.027 Score=40.95 Aligned_cols=50 Identities=18% Similarity=0.308 Sum_probs=32.1
Q ss_pred CCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCCh----hHHHhhCCCccCeEEEEeCcee
Q 025648 21 SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKYGVHGFPTLFLLNSSMR 77 (250)
Q Consensus 21 ~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~----~l~~~~~I~~~PTi~l~~g~~~ 77 (250)
||||+|++....+++.. +. +...|.+.++ .+.+..|...+|++++ +|+.+
T Consensus 31 p~Cp~C~~ak~~L~~~g-----i~-~~~~dI~~~~~~~~~l~~~~g~~tvP~ifi-~g~~i 84 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNLN-----VP-FEDVNILENEMLRQGLKEYSNWPTFPQLYI-GGEFF 84 (109)
T ss_dssp BSSHHHHHHHHHHHHTT-----CC-CEEEEGGGCHHHHHHHHHHHTCSSSCEEEE-TTEEE
T ss_pred CCChhHHHHHHHHHHcC-----CC-cEEEECCCCHHHHHHHHHHHCCCCCCeEEE-CCEEE
Confidence 59999999998888753 22 2222333333 4455568899997754 77543
No 401
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=95.10 E-value=0.0068 Score=45.24 Aligned_cols=53 Identities=21% Similarity=0.181 Sum_probs=34.0
Q ss_pred CCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCCh----hHHHhhCCCccCeEEEEeCcee
Q 025648 21 SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKYGVHGFPTLFLLNSSMR 77 (250)
Q Consensus 21 ~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~----~l~~~~~I~~~PTi~l~~g~~~ 77 (250)
||||+|++....|++..-.+. .+..+|.+.++ .+.+..|...+|++++ +|+.+
T Consensus 29 p~Cp~C~~ak~lL~~~gv~~~---~~~~~dv~~~~~~~~~l~~~sg~~tvP~vfI-~g~~i 85 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQGVDPA---KFAAYNVLEDPELREGIKEFSEWPTIPQLYV-NKEFI 85 (121)
T ss_dssp BCTTHHHHHHHHHHHHTBCGG---GEEEEECTTCHHHHHHHHHHHTCCSSCEEEE-TTEEE
T ss_pred CCCccHHHHHHHHHHcCCCcc---eEEEEEecCCHHHHHHHHHHhCCCCCCeEEE-CCEEE
Confidence 599999999999988632211 13333444444 3445568889999865 77543
No 402
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=95.06 E-value=0.00077 Score=50.00 Aligned_cols=39 Identities=18% Similarity=0.152 Sum_probs=32.7
Q ss_pred cCCCChhhhcCchHHHHHHHHH-----------------------HHHHHHHHhhhhHHHHhhh
Q 025648 132 SWARSPENLLQQETYLALATAF-----------------------VLLRLVYIFLPTLLIFAQF 172 (250)
Q Consensus 132 pw~~~ck~~~~~~~~~~lA~~f-----------------------~~~~~~i~~fPti~~f~~~ 172 (250)
+||++|+.+ .|.+..++..+ +..+|+|.++||+++|.++
T Consensus 41 ~wC~~C~~~--~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~~~~~ 102 (123)
T 1wou_A 41 SWCPDCVQA--EPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGTP 102 (123)
T ss_dssp BSCHHHHHH--HHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEETTSS
T ss_pred CcCHHHHHh--hHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEEEcCC
Confidence 399999999 99999888765 2367999999999999763
No 403
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=95.02 E-value=0.00072 Score=53.60 Aligned_cols=43 Identities=12% Similarity=0.057 Sum_probs=35.2
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHH---------------HHHHH---HHhhhhHHHHhhh
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFV---------------LLRLV---YIFLPTLLIFAQF 172 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~---------------~~~~~---i~~fPti~~f~~~ 172 (250)
.+++ +||++|+.+ .|.+.+++..+- ..+|+ +.+.||+++|.+|
T Consensus 60 ~F~A--~WC~pC~~~--~P~l~~l~~~~~~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~ 120 (167)
T 1z6n_A 60 VAGE--MWCPDCQIN--LAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEE 120 (167)
T ss_dssp EECC--TTCHHHHHH--HHHHHHHHHHCTTEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTT
T ss_pred EEEC--CCChhHHHH--HHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCC
Confidence 4577 899999999 999999988651 15565 8999999999875
No 404
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=95.00 E-value=0.04 Score=44.42 Aligned_cols=43 Identities=19% Similarity=0.407 Sum_probs=36.7
Q ss_pred hHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 56 SILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 56 ~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
+++.++||.++||++++ +|+....+.|..+.+.|.+.|++.+.
T Consensus 167 ~~a~~~gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~~~ 210 (216)
T 2in3_A 167 QRVAQWGISGFPALVVESGTDRYLITTGYRPIEALRQLLDTWLQ 210 (216)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHHHH
Confidence 45778899999999988 88776678899999999999988763
No 405
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=94.40 E-value=0.0013 Score=51.33 Aligned_cols=44 Identities=11% Similarity=0.191 Sum_probs=32.1
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHH-------HHH-----------HHHHHHHhhhhHHHHh-hhH
Q 025648 126 EESCPFSWARSPENLLQQETYLALAT-------AFV-----------LLRLVYIFLPTLLIFA-QFT 173 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~-------~f~-----------~~~~~i~~fPti~~f~-~~~ 173 (250)
.+++ +||++|+.| .|.+...+. .|+ ..++++.++||+++|. +|.
T Consensus 50 ~F~A--~WC~~Ck~m--~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~ 112 (151)
T 3ph9_A 50 IHHL--EDCQYSQAL--KKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLT 112 (151)
T ss_dssp EECC--TTCHHHHHH--HHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSC
T ss_pred EEEC--CCCHhHHHH--HHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCC
Confidence 3467 999999999 887774321 221 2578889999999997 654
No 406
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=94.18 E-value=0.0014 Score=51.29 Aligned_cols=44 Identities=11% Similarity=0.116 Sum_probs=33.8
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHH-----------------HHHHHH--HhhhhHHHH-hhhH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFV-----------------LLRLVY--IFLPTLLIF-AQFT 173 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~-----------------~~~~~i--~~fPti~~f-~~~~ 173 (250)
.+++ +||++|+.+ .|.+..++..+. ..++++ .++||+++| ++|.
T Consensus 52 ~F~a--~WC~~C~~~--~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~ 115 (164)
T 1sen_A 52 IIHK--SWCGACKAL--KPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGK 115 (164)
T ss_dssp EEEC--TTCHHHHHH--HHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSC
T ss_pred EEEC--CCCHHHHHH--HHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCC
Confidence 4467 999999999 999888766542 256777 559999999 6665
No 407
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=93.82 E-value=0.0035 Score=48.37 Aligned_cols=44 Identities=11% Similarity=0.069 Sum_probs=32.0
Q ss_pred CCC-CCCcCCCChhhhcCchHH---HHHHHHH---------------------------HHHHHHHHhhhhHHHH-hhhH
Q 025648 126 EES-CPFSWARSPENLLQQETY---LALATAF---------------------------VLLRLVYIFLPTLLIF-AQFT 173 (250)
Q Consensus 126 ~~~-~~~pw~~~ck~~~~~~~~---~~lA~~f---------------------------~~~~~~i~~fPti~~f-~~~~ 173 (250)
.+| + +||++|+.+ .|.+ ..++..+ +..+|+|.++||++++ ++|.
T Consensus 53 ~F~ga--~wC~~C~~~--~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~ 128 (154)
T 2ju5_A 53 FFTGS--DWCMWCIKM--QDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFIDAEGK 128 (154)
T ss_dssp EEECT--TTCHHHHHH--HHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEECTTCC
T ss_pred EEeCC--CCCHhHHHH--HHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEEcCCCC
Confidence 345 6 899999998 7776 4544432 2367899999999999 5554
No 408
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=93.73 E-value=0.051 Score=46.36 Aligned_cols=31 Identities=6% Similarity=0.114 Sum_probs=26.4
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHH
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSL 39 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~ 39 (250)
.+++.+++.|+.|.||+|+++.+.+++..+.
T Consensus 145 ~~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 145 ANKDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp GGTTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCCCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 3567999999999999999999999965543
No 409
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=93.59 E-value=0.084 Score=42.01 Aligned_cols=42 Identities=17% Similarity=0.108 Sum_probs=32.2
Q ss_pred cCCCeEEEEEEcCCChhHHhhhHHHHHHHHHc-CCCCEEEEEc
Q 025648 9 NSHEYVAVLFYASWCPFSRNFRPSFSVLSSLY-SSIPHFAIEE 50 (250)
Q Consensus 9 ~~~~~vlV~Fya~wC~~C~~~~p~~e~la~~~-~~~~~v~~~d 50 (250)
.....++|.|....||+|+++.+.+.++.+.+ ++.+.+...+
T Consensus 12 g~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~ 54 (182)
T 3gn3_A 12 GHGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRL 54 (182)
T ss_dssp ECCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEE
T ss_pred CCCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 35678899999999999999999988877665 6655444433
No 410
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=93.16 E-value=0.0033 Score=45.65 Aligned_cols=41 Identities=7% Similarity=0.034 Sum_probs=30.8
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH-----------------HHHHHHHHhhhhHHHHhhhH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF-----------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f-----------------~~~~~~i~~fPti~~f~~~~ 173 (250)
+++ +||++|+.+ .|.+..++..| +..+|++.++||+ |.+|.
T Consensus 25 f~a--~~C~~C~~~--~~~l~~~~~~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~ 82 (116)
T 2e7p_A 25 FSK--TYCGYCNRV--KQLLTQVGASYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGK 82 (116)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHTCCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTE
T ss_pred EEC--CCChhHHHH--HHHHHHcCCCeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCE
Confidence 355 899999999 88877776533 3467899999999 55554
No 411
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=92.46 E-value=0.0095 Score=43.61 Aligned_cols=39 Identities=10% Similarity=-0.015 Sum_probs=32.2
Q ss_pred cCCCChhhhcCchHHHHHHHHH--------------HHHHHHHHhhhhHHHHhhhH
Q 025648 132 SWARSPENLLQQETYLALATAF--------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 132 pw~~~ck~~~~~~~~~~lA~~f--------------~~~~~~i~~fPti~~f~~~~ 173 (250)
|||+.|+.+ .|..+.++..+ +..+|++. .|||++|.+|.
T Consensus 38 ~~C~~C~~a--~~~L~~l~~e~~i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~ 90 (107)
T 2fgx_A 38 EGCHLCEEM--IASLRVLQKKSWFELEVINIDGNEHLTRLYNDR-VPVLFAVNEDK 90 (107)
T ss_dssp SSCHHHHHH--HHHHHHHHHHSCCCCEEEETTTCHHHHHHSTTS-CSEEEETTTTE
T ss_pred CCChhHHHH--HHHHHHHHHhcCCeEEEEECCCCHHHHHHhCCC-CceEEEEECCE
Confidence 899999999 99888887664 23688887 99999888765
No 412
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=91.53 E-value=0.025 Score=42.02 Aligned_cols=24 Identities=8% Similarity=0.159 Sum_probs=16.2
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
.+++ +||++|+.+ .|.+..++..|
T Consensus 32 ~F~a--~wC~~C~~~--~~~l~~~~~~~ 55 (143)
T 2lus_A 32 YFSA--HWCPPCRGF--TPILADMYSEL 55 (143)
Confidence 4466 899999887 66655554433
No 413
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=92.11 E-value=0.0045 Score=43.50 Aligned_cols=38 Identities=11% Similarity=-0.060 Sum_probs=30.8
Q ss_pred cCCCChhhhcCchHHHHHHHH-H----------HHHHHHHHhhhhHHHHhhhH
Q 025648 132 SWARSPENLLQQETYLALATA-F----------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 132 pw~~~ck~~~~~~~~~~lA~~-f----------~~~~~~i~~fPti~~f~~~~ 173 (250)
|||+.|+.+ .|..+.++.. | +..+|+++ .||+++ .+|.
T Consensus 9 ~~C~~C~~~--~~~L~~~~~~~~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~ 57 (87)
T 1ttz_A 9 DDCHLCDQA--VEALAQARAGAFFSVFIDDDAALESAYGLR-VPVLRD-PMGR 57 (87)
T ss_dssp SSCHHHHHH--HHHHHHTTCCCEEEEECTTCHHHHHHHTTT-CSEEEC-TTCC
T ss_pred CCCchHHHH--HHHHHHHHHhheEEEECCCCHHHHHHhCCC-cCeEEE-ECCE
Confidence 999999999 8888888775 3 23789998 999988 5554
No 414
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=91.89 E-value=0.037 Score=43.83 Aligned_cols=54 Identities=11% Similarity=0.081 Sum_probs=36.4
Q ss_pred CCCeEEEEEE-cCCChhHHhhhHHHHHHHHHcC--CCC-EEEEE--cCCCChhHHHhhCC
Q 025648 10 SHEYVAVLFY-ASWCPFSRNFRPSFSVLSSLYS--SIP-HFAIE--ESAIRPSILSKYGV 63 (250)
Q Consensus 10 ~~~~vlV~Fy-a~wC~~C~~~~p~~e~la~~~~--~~~-~v~~~--d~~~~~~l~~~~~I 63 (250)
.++.+++.|| ..|||.|....+.|.+..+++. +.. .+++- +...+...++++++
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~~ 100 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVDP 100 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHCT
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCC
Confidence 4567777777 6799999999999999888886 453 44442 11123355566655
No 415
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=91.38 E-value=0.0018 Score=48.33 Aligned_cols=44 Identities=11% Similarity=-0.059 Sum_probs=29.4
Q ss_pred CCCCCCcCCCChhhhcCchHH----HHHHHH--H--------------HHHHHHHHhhhhHHHHhhhH
Q 025648 126 EESCPFSWARSPENLLQQETY----LALATA--F--------------VLLRLVYIFLPTLLIFAQFT 173 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~----~~lA~~--f--------------~~~~~~i~~fPti~~f~~~~ 173 (250)
.+++ +||++|+.| .+.. ...+.. + +..+|+|.+-||+++|.+|.
T Consensus 24 ~F~A--~wC~~Ck~~--~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ 87 (116)
T 3dml_A 24 MFEQ--PGCLYCARW--DAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDV 87 (116)
T ss_dssp EEEC--TTCHHHHHH--HHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTE
T ss_pred EEEC--CCCHHHHHH--HHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCE
Confidence 3467 899999997 4322 211111 1 12678899999999999765
No 416
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=91.02 E-value=0.0085 Score=47.70 Aligned_cols=44 Identities=14% Similarity=-0.075 Sum_probs=29.0
Q ss_pred CCCCCCcCCCChhhhcCchH-H--HHHHHH----HH------------HHHH--------HHHhhhhHHHHh-hhH
Q 025648 126 EESCPFSWARSPENLLQQET-Y--LALATA----FV------------LLRL--------VYIFLPTLLIFA-QFT 173 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~-~--~~lA~~----f~------------~~~~--------~i~~fPti~~f~-~~~ 173 (250)
.+++ +||++|+.| .+. | .+++.. |+ ...| +|.++||++++. +|.
T Consensus 45 dF~A--~WC~~Ck~m--~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 45 SIGY--STCHWCHMM--AHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKK 116 (173)
T ss_dssp EEEC--TTCHHHHHH--HHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTSC
T ss_pred eccc--chhHhhccc--cccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceeeECCCCC
Confidence 4467 899999998 652 2 233332 31 2455 789999999995 443
No 417
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=90.75 E-value=0.023 Score=41.89 Aligned_cols=40 Identities=8% Similarity=-0.032 Sum_probs=34.3
Q ss_pred cCCCChhhhcCchHHHHHHHHH------------------HHHHHHHH-hhhhHHHHhhhH
Q 025648 132 SWARSPENLLQQETYLALATAF------------------VLLRLVYI-FLPTLLIFAQFT 173 (250)
Q Consensus 132 pw~~~ck~~~~~~~~~~lA~~f------------------~~~~~~i~-~fPti~~f~~~~ 173 (250)
.|||.|+.+ .|.++.++..= +..+++|+ .-||+++|.+|.
T Consensus 34 twCgpc~~~--~~~~e~~~~~~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~il~k~G~ 92 (112)
T 3iv4_A 34 ETCPISANA--YDQFNKFLYERDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFVNGE 92 (112)
T ss_dssp TTCHHHHHH--HHHHHHHHHHHTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEEEEETTE
T ss_pred CcCHhHHHH--HHHHHHHhccCCceEEEEEeecCchhhHHHHHHhCCccCCCeEEEEECCE
Confidence 799999999 99999887641 34899999 599999999886
No 418
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=90.50 E-value=0.0092 Score=40.52 Aligned_cols=35 Identities=9% Similarity=-0.060 Sum_probs=26.4
Q ss_pred cCCCChhhhcCchHHHHHHHHH-----------------HHHHHHHHhhhhHHH
Q 025648 132 SWARSPENLLQQETYLALATAF-----------------VLLRLVYIFLPTLLI 168 (250)
Q Consensus 132 pw~~~ck~~~~~~~~~~lA~~f-----------------~~~~~~i~~fPti~~ 168 (250)
|||++|+.+ .+....++..+ ...+|++.+.||+++
T Consensus 10 ~~C~~C~~~--~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i 61 (80)
T 2k8s_A 10 AGCPVCVSA--EQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI 61 (80)
T ss_dssp CSCHHHHHH--HHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE
T ss_pred CCCCchHHH--HHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE
Confidence 899999999 77766655432 236788889999865
No 419
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=90.44 E-value=0.16 Score=47.65 Aligned_cols=60 Identities=12% Similarity=0.302 Sum_probs=38.5
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCC----ChhHHHhhCCCccCeEEEEeCceeE
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAI----RPSILSKYGVHGFPTLFLLNSSMRV 78 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~----~~~l~~~~~I~~~PTi~l~~g~~~~ 78 (250)
++.|..+|||+|++....+++..-.| ..+.++..+. ...+.+..+...+|.+++ +|+.+.
T Consensus 20 v~vy~~~~Cp~C~~~k~~L~~~~i~~---~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v~i-~g~~ig 83 (598)
T 2x8g_A 20 VILFSKTTCPYCKKVKDVLAEAKIKH---ATIELDQLSNGSAIQKCLASFSKIETVPQMFV-RGKFIG 83 (598)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCC---EEEEGGGSTTHHHHHHHTHHHHSCCCSCEEEE-TTEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHCCCCc---EEEEcccCcchHHHHHHHHHHhCCceeCEEEE-CCEEEE
Confidence 67799999999999998888653222 2333322111 133445678899999843 776543
No 420
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=90.38 E-value=0.13 Score=40.38 Aligned_cols=43 Identities=9% Similarity=0.295 Sum_probs=33.2
Q ss_pred hhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 55 PSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 55 ~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
..++.++||.++||+++ ||+......|..+.+.|.+.|++.+.
T Consensus 152 ~~~a~~~gv~gtPt~~i-ng~~~~~~~g~~~~~~l~~~i~~~l~ 194 (195)
T 3c7m_A 152 KASYDVAKIQGVPAYVV-NGKYLIYTKSIKSIDAMADLIRELAS 194 (195)
T ss_dssp GGHHHHHHHHCSSEEEE-TTTEEECGGGCCCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCccCEEEE-CCEEEeccCCCCCHHHHHHHHHHHHh
Confidence 35678899999999655 88754444477899999999988753
No 421
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=90.18 E-value=0.16 Score=40.29 Aligned_cols=37 Identities=16% Similarity=0.252 Sum_probs=31.0
Q ss_pred hHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHH
Q 025648 56 SILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFY 93 (250)
Q Consensus 56 ~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi 93 (250)
..+.++||+++||+++ ||+......|..+.+++.++|
T Consensus 145 ~~a~~~GV~gtPtf~i-ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 145 KYARQNGIHVSPTFMI-NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHTCCSSSEEEE-TTEECTTCCTTSCHHHHHHHH
T ss_pred HHHHHCCCCccCEEEE-CCEEccCCCCCCCHHHHHHHh
Confidence 5678899999999987 887766678889999988876
No 422
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=89.51 E-value=0.73 Score=34.23 Aligned_cols=56 Identities=16% Similarity=0.098 Sum_probs=33.2
Q ss_pred EEEEEEcCCChhHH------hhhHHHHHHHHHcCCCCEEEEEcCCCCh----hHHHhh--------CCCccCeEEEEeCc
Q 025648 14 VAVLFYASWCPFSR------NFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKY--------GVHGFPTLFLLNSS 75 (250)
Q Consensus 14 vlV~Fya~wC~~C~------~~~p~~e~la~~~~~~~~v~~~d~~~~~----~l~~~~--------~I~~~PTi~l~~g~ 75 (250)
|++.|.++.||+|+ +....|+. .++.+-. .|.+.++ .+.++. |...+|.|++ ++.
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~~-----kgV~feE-idI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi-~~~ 73 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLEA-----NKIGFEE-KDIAANEENRKWMRENVPENSRPATGYPLPPQIFN-ESQ 73 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHHH-----TTCCEEE-EECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEE-TTE
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHHH-----CCCceEE-EECCCCHHHHHHHHHhccccccccCCCcCCCEEEE-CCE
Confidence 46788999999994 44444332 2343333 3444443 455566 7778887765 554
Q ss_pred e
Q 025648 76 M 76 (250)
Q Consensus 76 ~ 76 (250)
.
T Consensus 74 ~ 74 (121)
T 1u6t_A 74 Y 74 (121)
T ss_dssp E
T ss_pred E
Confidence 3
No 423
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=89.42 E-value=0.83 Score=33.73 Aligned_cols=51 Identities=18% Similarity=0.274 Sum_probs=31.3
Q ss_pred CCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCCh----hHHHhhCCCccCeEEEEeCcee
Q 025648 21 SWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRP----SILSKYGVHGFPTLFLLNSSMR 77 (250)
Q Consensus 21 ~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~----~l~~~~~I~~~PTi~l~~g~~~ 77 (250)
|.||+|++....+++. ++..+..++.+.++ .+.+.-|-+.+|.|++ +|+.+
T Consensus 33 P~C~fc~~ak~lL~~~-----gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPqIFI-~g~~I 87 (118)
T 2wul_A 33 PQCGFSNAVVQILRLH-----GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYL-NGEFV 87 (118)
T ss_dssp BSSHHHHHHHHHHHHT-----TCCSCEEEETTSCHHHHHHHHHHHTCCSSCEEEE-TTEEE
T ss_pred CCCHHHHHHHHHHHHh-----CCcCeEeecccCCHHHHHHHHHhccCCCCCeEeE-CCEEE
Confidence 6799999998777643 22222333444444 3455557778888865 77543
No 424
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=88.72 E-value=0.059 Score=36.39 Aligned_cols=33 Identities=9% Similarity=-0.069 Sum_probs=25.2
Q ss_pred cCCCChhhhcCchHHHHHHHHH-------------------HHHHHH--HHhhhhH
Q 025648 132 SWARSPENLLQQETYLALATAF-------------------VLLRLV--YIFLPTL 166 (250)
Q Consensus 132 pw~~~ck~~~~~~~~~~lA~~f-------------------~~~~~~--i~~fPti 166 (250)
|||++|+.+ .+....++..+ +..+++ +..+|++
T Consensus 9 ~~C~~C~~~--~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i 62 (85)
T 1ego_A 9 SGCPYCVRA--KDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI 62 (85)
T ss_dssp TTSTHHHHH--HHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE
T ss_pred CCCCCHHHH--HHHHHHHHhcCCCceEEEEecccChHHHHHHHHHhCCCCceeCeE
Confidence 899999999 88888877653 124566 7788887
No 425
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=88.70 E-value=0.012 Score=44.91 Aligned_cols=23 Identities=13% Similarity=-0.081 Sum_probs=18.1
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATA 152 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~ 152 (250)
.+++ +||++|+.+ .|.+..++..
T Consensus 44 ~F~a--~~C~~C~~~--~~~l~~l~~~ 66 (164)
T 2h30_A 44 KFWA--SWCPLCLSE--LGQAEKWAQD 66 (164)
T ss_dssp EECC--TTCHHHHHH--HHHHHHHHTC
T ss_pred EEEC--CCCHHHHHH--HHHHHHHHHH
Confidence 3466 899999998 8888877654
No 426
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=87.45 E-value=0.11 Score=39.45 Aligned_cols=19 Identities=11% Similarity=0.044 Sum_probs=13.4
Q ss_pred CCCCCCcCCCChhhhcCchHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLA 148 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~ 148 (250)
.+++ +||++|+.. .|.+..
T Consensus 39 ~f~a--~~C~~C~~~--~~~l~~ 57 (159)
T 2ls5_A 39 QFTA--SWCGVCRKE--MPFIEK 57 (159)
Confidence 3456 899999887 555554
No 427
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=85.73 E-value=0.84 Score=36.30 Aligned_cols=39 Identities=23% Similarity=0.319 Sum_probs=31.7
Q ss_pred hHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHHHhhC
Q 025648 56 SILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVTG 98 (250)
Q Consensus 56 ~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~~~~~ 98 (250)
..+.++||.|+||+++ +|+ .+.|....+.|.+.|.+...
T Consensus 158 ~~a~~~Gv~G~Ptfvi-~g~---~~~G~~~~~~l~~~l~~~~~ 196 (203)
T 2imf_A 158 HAAIERKVFGVPTMFL-GDE---MWWGNDRLFMLESAMGRLCR 196 (203)
T ss_dssp HHHHHTTCCSSSEEEE-TTE---EEESGGGHHHHHHHHHHHHH
T ss_pred HHHHHCCCCcCCEEEE-CCE---EEECCCCHHHHHHHHhcccc
Confidence 4567789999999887 775 57898999999999987653
No 428
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=85.55 E-value=0.027 Score=42.59 Aligned_cols=24 Identities=8% Similarity=-0.003 Sum_probs=19.5
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
.+++ +||++|+.+ .|.+..++..|
T Consensus 30 ~F~a--~wC~~C~~~--~~~l~~l~~~~ 53 (151)
T 3raz_A 30 NLWA--TWCGPCRKE--MPAMSKWYKAQ 53 (151)
T ss_dssp EEEC--TTCHHHHHH--HHHHHHHHHTS
T ss_pred EEEc--CcCHHHHHH--HHHHHHHHHHh
Confidence 3466 899999998 88888887765
No 429
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=84.73 E-value=0.046 Score=40.85 Aligned_cols=39 Identities=18% Similarity=0.130 Sum_probs=33.8
Q ss_pred CCCCcCCCChhhhcCchHHHHHHHHHH----------------HHHHHHHh--hhhHHHHhh
Q 025648 128 SCPFSWARSPENLLQQETYLALATAFV----------------LLRLVYIF--LPTLLIFAQ 171 (250)
Q Consensus 128 ~~~~pw~~~ck~~~~~~~~~~lA~~f~----------------~~~~~i~~--fPti~~f~~ 171 (250)
|+ + |++|+.+ .|.++.+|..|. ..+|+|.+ .||+++|..
T Consensus 31 ~a--~-~~~c~~~--~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~~~ 87 (133)
T 2djk_A 31 AE--T-AEERKEL--SDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQEV 87 (133)
T ss_dssp CS--C-SSSHHHH--HHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEECT
T ss_pred ec--C-hhhHHHH--HHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEEEEec
Confidence 55 6 7899999 999999999883 27899999 999999986
No 430
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=84.25 E-value=1.6 Score=35.90 Aligned_cols=41 Identities=15% Similarity=0.292 Sum_probs=33.6
Q ss_pred hHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHHHhhCC
Q 025648 56 SILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVTGM 99 (250)
Q Consensus 56 ~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~~~~~~ 99 (250)
..+.++||.|+||+++ +|+ ..+.|..+.+.|.+.|++.+..
T Consensus 174 ~~a~~~Gv~GvPtfvv-~g~--~~v~Ga~~~e~~~~~i~~~~~~ 214 (239)
T 3gl5_A 174 REAAQLGATGVPFFVL-DRA--YGVSGAQPAEVFTQALTQAWGE 214 (239)
T ss_dssp HHHHHTTCCSSSEEEE-TTT--EEEESSCCHHHHHHHHHHHHHT
T ss_pred HHHHHCCCCeeCeEEE-CCc--EeecCCCCHHHHHHHHHHHHhh
Confidence 4567899999999987 775 3447999999999999988764
No 431
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=83.42 E-value=0.84 Score=33.13 Aligned_cols=21 Identities=19% Similarity=0.200 Sum_probs=18.1
Q ss_pred EEEEEcCCChhHHhhhHHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSV 35 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~ 35 (250)
++.|+.|+|+.|++....+++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~ 22 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE 22 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 467889999999999888876
No 432
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=82.67 E-value=0.085 Score=40.02 Aligned_cols=23 Identities=4% Similarity=0.144 Sum_probs=19.5
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
+++ +||++|+.+ .|.+..++..|
T Consensus 41 f~~--~~C~~C~~~--~~~l~~l~~~~ 63 (165)
T 3or5_A 41 FFA--TWCPPCRSE--IPDMVQVQKTW 63 (165)
T ss_dssp EEC--TTSHHHHHH--HHHHHHHHHHH
T ss_pred EEc--CcCHHHHHH--HHHHHHHHHHh
Confidence 356 899999999 88888888876
No 433
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=82.29 E-value=0.099 Score=39.65 Aligned_cols=24 Identities=4% Similarity=-0.080 Sum_probs=18.8
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
.+++ +||+.|... .|.+..++..|
T Consensus 41 ~F~a--~wC~~C~~~--~~~l~~l~~~~ 64 (152)
T 2lrt_A 41 DFTV--YNNAMSAAH--NLALRELYNKY 64 (152)
T ss_dssp EEEC--TTCHHHHHH--HHHHHHHHHHH
T ss_pred EEEc--CCChhhHHH--HHHHHHHHHHh
Confidence 3466 899999988 78888777766
No 434
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=81.92 E-value=1 Score=33.56 Aligned_cols=22 Identities=18% Similarity=0.270 Sum_probs=18.8
Q ss_pred EEEEEcCCChhHHhhhHHHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSVL 36 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~l 36 (250)
++.|+.|+|+.|++....+++.
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~ 24 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH 24 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEeCCCChHHHHHHHHHHHc
Confidence 5678999999999999888763
No 435
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=81.36 E-value=1.1 Score=32.79 Aligned_cols=22 Identities=9% Similarity=0.067 Sum_probs=18.9
Q ss_pred EEEEEcCCChhHHhhhHHHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSVL 36 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~l 36 (250)
++.|+.|+|+.|++....+++.
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~ 28 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH 28 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc
Confidence 5678899999999999888764
No 436
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=80.99 E-value=1.5 Score=34.94 Aligned_cols=36 Identities=11% Similarity=0.329 Sum_probs=29.5
Q ss_pred hHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHHH
Q 025648 56 SILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSD 95 (250)
Q Consensus 56 ~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~~ 95 (250)
..+.++||.|+||+++ +|+ .+.|....+.|.++|.+
T Consensus 164 ~~a~~~Gv~GvPtfvv-~g~---~~~G~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 164 EDAVARGIFGSPFFLV-DDE---PFWGWDRMEMMAEWIRT 199 (202)
T ss_dssp HHHHHTTCCSSSEEEE-TTE---EEESGGGHHHHHHHHHT
T ss_pred HHHHHCCCCcCCEEEE-CCE---EEecCCCHHHHHHHHhc
Confidence 4567789999999987 774 67898889999888865
No 437
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=79.46 E-value=0.13 Score=39.78 Aligned_cols=40 Identities=13% Similarity=0.026 Sum_probs=28.3
Q ss_pred cCCCChhhh----cCchHHHHHH-HHH--------------HHHHHHHHhhhhHHHHhh
Q 025648 132 SWARSPENL----LQQETYLALA-TAF--------------VLLRLVYIFLPTLLIFAQ 171 (250)
Q Consensus 132 pw~~~ck~~----~~~~~~~~lA-~~f--------------~~~~~~i~~fPti~~f~~ 171 (250)
+||..|+.| +.+|.-.++- ..| +..+|++.++||++++-.
T Consensus 52 ~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~ 110 (153)
T 2dlx_A 52 VQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDP 110 (153)
T ss_dssp SCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECT
T ss_pred CCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeC
Confidence 799999887 4445544332 333 237899999999999954
No 438
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=78.80 E-value=1.5 Score=32.13 Aligned_cols=76 Identities=13% Similarity=0.141 Sum_probs=40.0
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCC----hhHHHhhCCCccCeEEEEeCc-eeEEE----eCCCC
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIR----PSILSKYGVHGFPTLFLLNSS-MRVRY----HGSRT 85 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~----~~l~~~~~I~~~PTi~l~~g~-~~~~~----~G~~~ 85 (250)
+..|+.|+|+.|++....+++. ++. +...|..++ .++.+-++-.+.|.--++|.+ ...+- ....+
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~-----gi~-~~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~~~~ls 75 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNRH-----DVV-FQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDIDVDELS 75 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-----TCC-EEEEETTTSCCCHHHHHHHHHHCSSTHHHHBCTTCHHHHHTTCCGGGCC
T ss_pred EEEEeCCCCHHHHHHHHHHHHc-----CCC-eEEEecccCCCcHHHHHHHHhhcCCCHHHhhcCCcHHHHHcCCCcccCC
Confidence 5678899999999999888753 333 233333222 233333333344433344211 11100 12356
Q ss_pred HHHHHHHHHHh
Q 025648 86 LDSLVAFYSDV 96 (250)
Q Consensus 86 ~~~l~~fi~~~ 96 (250)
.+++.+.+.++
T Consensus 76 ~~~~~~~m~~~ 86 (120)
T 3l78_A 76 VSELINLISKN 86 (120)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 77777777664
No 439
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=77.70 E-value=0.14 Score=38.41 Aligned_cols=23 Identities=13% Similarity=0.202 Sum_probs=18.3
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
+++ +||++|+.. .|.+..++..|
T Consensus 35 f~~--~~C~~C~~~--~~~l~~~~~~~ 57 (154)
T 3kcm_A 35 FWA--TWCPPCREE--IPSMMRLNAAM 57 (154)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHHHT
T ss_pred EEC--CCCHHHHHH--HHHHHHHHHHh
Confidence 355 899999998 78888777765
No 440
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=76.22 E-value=1 Score=32.52 Aligned_cols=61 Identities=16% Similarity=0.186 Sum_probs=50.0
Q ss_pred CCeEEEEEEcCCChhHHhhhHHHHHHHH-HcCCCCEEEEEcCCCChhHHHhhCCCccCeEEE
Q 025648 11 HEYVAVLFYASWCPFSRNFRPSFSVLSS-LYSSIPHFAIEESAIRPSILSKYGVHGFPTLFL 71 (250)
Q Consensus 11 ~~~vlV~Fya~wC~~C~~~~p~~e~la~-~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l 71 (250)
...++..|-+-.-+.+++....+.++-+ .+++...+.++|..+++++++.++|-.+||++-
T Consensus 6 ~~~~L~LyVaG~tp~S~~ai~nL~~i~e~~l~~~y~LeVIDv~~~PelAe~~~IvAtPTLiK 67 (105)
T 1wwj_A 6 KTYVLKLYVAGNTPNSVRALKMLKNILEQEFQGVYALKVIDVLKNPQLAEEDKILATPTLAK 67 (105)
T ss_dssp EEEEEEEEESSCCHHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCSCCTTCEEECHHHHGG
T ss_pred CceEEEEEEeCCCchHHHHHHHHHHHHHHhcCCCeEEEEEEcccCHhHHhHCCeEEechhhh
Confidence 3466777777688888888888887654 466788999999999999999999999999873
No 441
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=75.00 E-value=2.2 Score=31.26 Aligned_cols=22 Identities=14% Similarity=0.262 Sum_probs=18.5
Q ss_pred EEEEEcCCChhHHhhhHHHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSVL 36 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~l 36 (250)
+..|+.|+|+.|++....+++-
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~~ 26 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDDL 26 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc
Confidence 5678899999999999887754
No 442
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=73.06 E-value=5.6 Score=31.40 Aligned_cols=29 Identities=21% Similarity=0.355 Sum_probs=24.8
Q ss_pred eEEEEEEcCCChhHHhhhHHHHHHHHHcC
Q 025648 13 YVAVLFYASWCPFSRNFRPSFSVLSSLYS 41 (250)
Q Consensus 13 ~vlV~Fya~wC~~C~~~~p~~e~la~~~~ 41 (250)
..++.|+..-||+|....+.++++.+...
T Consensus 8 ~~I~~f~D~~CP~C~~~~~~~~~l~~~~~ 36 (216)
T 2in3_A 8 PVLWYIADPMCSWCWGFAPVIENIRQEYS 36 (216)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred eeEEEEECCCCchhhcchHHHHHHHhcCC
Confidence 56888999999999999999999988433
No 443
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=71.54 E-value=2.4 Score=31.05 Aligned_cols=21 Identities=5% Similarity=0.100 Sum_probs=17.9
Q ss_pred EEEEEcCCChhHHhhhHHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSV 35 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~ 35 (250)
+..|+.|+|+.|++....+++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~ 26 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE 26 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 567889999999999887775
No 444
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=71.43 E-value=5.7 Score=32.36 Aligned_cols=40 Identities=18% Similarity=0.367 Sum_probs=30.6
Q ss_pred hHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHHHHHHHHHh
Q 025648 56 SILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDV 96 (250)
Q Consensus 56 ~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~l~~fi~~~ 96 (250)
..+.++||.|+||+++= +|+ -..|.|.-..+.|.++|.+.
T Consensus 173 ~~a~~~Gv~GvPtfvv~~~g~-~~~f~G~drl~~l~~~L~~~ 213 (234)
T 3rpp_A 173 EAACRYGAFGLPITVAHVDGQ-THMLFGSDRMELLAHLLGEK 213 (234)
T ss_dssp HHHHHTTCSSSCEEEEEETTE-EEEEESSSCHHHHHHHHTCC
T ss_pred HHHHHcCCCCCCEEEEeCCCC-cCceeCccCHHHHHHHhccc
Confidence 45667899999999872 343 45788988899998888654
No 445
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=69.39 E-value=1.1 Score=32.71 Aligned_cols=24 Identities=13% Similarity=0.238 Sum_probs=19.7
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
.+++ +||++|+.+ .|.+..++..|
T Consensus 39 ~F~~--~~C~~C~~~--~~~l~~l~~~~ 62 (148)
T 3fkf_A 39 NFWA--SWCDPQPEA--NAELKRLNKEY 62 (148)
T ss_dssp EEEC--GGGCCCHHH--HHHHHHHHHHT
T ss_pred EEEC--CCCHHHHHH--hHHHHHHHHHh
Confidence 3466 899999999 88888888766
No 446
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=67.55 E-value=2.6 Score=30.60 Aligned_cols=25 Identities=4% Similarity=-0.407 Sum_probs=20.0
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFV 154 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~ 154 (250)
.+++ +||++|..+ .|.+..++..|.
T Consensus 37 ~f~~--~~C~~C~~~--~~~l~~l~~~~~ 61 (148)
T 3hcz_A 37 FFWD--SQCGHCQQE--TPKLYDWWLKNR 61 (148)
T ss_dssp EEEC--GGGCTTCSH--HHHHHHHHHHHG
T ss_pred EEEC--CCCccHHHH--HHHHHHHHHHhc
Confidence 3466 899999998 888888887763
No 447
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=67.31 E-value=1.2 Score=32.62 Aligned_cols=25 Identities=8% Similarity=-0.136 Sum_probs=20.0
Q ss_pred CCCCCCcCCCChhhhcCchHHHH---HHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLA---LATAFV 154 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~---lA~~f~ 154 (250)
.+|+ +||++|+.. .|.+.. +...|.
T Consensus 37 ~F~a--~wC~~C~~~--~~~l~~~~~l~~~~~ 64 (142)
T 3eur_A 37 FINN--PGCHACAEM--IEGLKASPVINGFTA 64 (142)
T ss_dssp EECC--SSSHHHHHH--HHHHHHCHHHHHHHH
T ss_pred EEEC--CCCccHHHH--HHHHhhhHHHHHHhc
Confidence 3466 899999998 888888 777664
No 448
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=66.94 E-value=11 Score=30.09 Aligned_cols=39 Identities=23% Similarity=0.418 Sum_probs=28.5
Q ss_pred hHHHhhCCCccCeEEEE-eCceeEEEeCCCCHHHHHHHHHH
Q 025648 56 SILSKYGVHGFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSD 95 (250)
Q Consensus 56 ~l~~~~~I~~~PTi~l~-~g~~~~~~~G~~~~~~l~~fi~~ 95 (250)
+.+.++||.|+||+++= +|+ -..+.|....+.|.+.|.+
T Consensus 173 ~~a~~~gv~G~Ptfvv~~~g~-~~~~~G~~~~~~l~~~l~~ 212 (226)
T 1r4w_A 173 GAACKYGAFGLPTTVAHVDGK-TYMLFGSDRMELLAYLLGE 212 (226)
T ss_dssp HHHHHTTCCSSCEEEEEETTE-EEEEESTTCHHHHHHHHTC
T ss_pred HHHHHCCCCCCCEEEEeCCCC-cCceeCCCcHHHHHHHhcC
Confidence 44677899999999663 222 2467798888888888875
No 449
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=65.96 E-value=3.2 Score=30.48 Aligned_cols=30 Identities=23% Similarity=0.475 Sum_probs=26.2
Q ss_pred CeEEEEEEcCCChhHHhhhHHHHHHHHHcC
Q 025648 12 EYVAVLFYASWCPFSRNFRPSFSVLSSLYS 41 (250)
Q Consensus 12 ~~vlV~Fya~wC~~C~~~~p~~e~la~~~~ 41 (250)
+.+++.|.-|-|+-|+.....+.++.++|.
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~ledeY~ 31 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKSEYD 31 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTTTEE
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhcccc
Confidence 568999999999999999999988877773
No 450
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=65.51 E-value=1.2 Score=32.69 Aligned_cols=25 Identities=16% Similarity=0.259 Sum_probs=20.2
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFV 154 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~ 154 (250)
.+++ +||++|+.+ .|.+..++..|.
T Consensus 34 ~F~a--~wC~~C~~~--~~~l~~l~~~~~ 58 (144)
T 1i5g_A 34 YFSA--SWCPPSRAF--TPQLIDFYKAHA 58 (144)
T ss_dssp EEEC--TTCHHHHHH--HHHHHHHHHHHT
T ss_pred EEEC--CCCHHHHHH--HHHHHHHHHHhc
Confidence 3466 899999999 898888887654
No 451
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=65.47 E-value=3.3 Score=31.30 Aligned_cols=76 Identities=16% Similarity=0.035 Sum_probs=40.8
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCC----ChhHHHhhCCCccCeEEEEe-CceeEEE----eCCCC
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAI----RPSILSKYGVHGFPTLFLLN-SSMRVRY----HGSRT 85 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~----~~~l~~~~~I~~~PTi~l~~-g~~~~~~----~G~~~ 85 (250)
+..|+.|+|+.|++....+++- ++. +...|..+ ..++.+-++-.++|.--+++ ....++- ....+
T Consensus 4 itiY~~p~C~~crkak~~L~~~-----gi~-~~~idi~~~~~~~~eL~~~~~~~g~p~~~l~n~~~~~yk~l~l~~~~ls 77 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRNS-----GTE-PTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAEDKFT 77 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHHT-----TCC-CEEECTTTSCCCHHHHHHHHHHHTSCHHHHBCSSSHHHHHTTTTSSCCC
T ss_pred EEEEECCCChHHHHHHHHHHHc-----CCC-EEEEECCCCCccHHHHHHHhcccCCCHHHhccCCchhHHhcCCccccCC
Confidence 4568899999999998887752 332 22233322 22343444444556544442 1111110 02357
Q ss_pred HHHHHHHHHHh
Q 025648 86 LDSLVAFYSDV 96 (250)
Q Consensus 86 ~~~l~~fi~~~ 96 (250)
.+++.+.+.++
T Consensus 78 ~~~~~~lm~~~ 88 (141)
T 1s3c_A 78 DDQLIDFMLQH 88 (141)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhC
Confidence 77777777764
No 452
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=65.10 E-value=2.8 Score=30.78 Aligned_cols=21 Identities=14% Similarity=0.213 Sum_probs=17.7
Q ss_pred EEEEEcCCChhHHhhhHHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSV 35 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~ 35 (250)
+..|+.|+|+.|++....+++
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~ 27 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ 27 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHH
Confidence 567889999999999887764
No 453
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=64.97 E-value=1.3 Score=32.74 Aligned_cols=25 Identities=16% Similarity=0.299 Sum_probs=20.2
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFV 154 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~ 154 (250)
.+++ +||++|+.+ .|.+..++..|.
T Consensus 34 ~F~a--~wC~~C~~~--~p~l~~l~~~~~ 58 (146)
T 1o8x_A 34 YFSA--SWCPPARGF--TPQLIEFYDKFH 58 (146)
T ss_dssp EEEC--TTCHHHHHH--HHHHHHHHHHHT
T ss_pred EEEc--cCCHHHHHH--HHHHHHHHHHhh
Confidence 3466 899999999 888888887654
No 454
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=63.40 E-value=2.5 Score=31.31 Aligned_cols=25 Identities=12% Similarity=-0.131 Sum_probs=19.8
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFV 154 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~ 154 (250)
.+++ +||++|+.. .|.+..++..|.
T Consensus 35 ~F~a--~~C~~C~~~--~~~l~~l~~~~~ 59 (152)
T 2lrn_A 35 DFWF--AGCSWCRKE--TPYLLKTYNAFK 59 (152)
T ss_dssp EEEC--TTCTTHHHH--HHHHHHHHHHHT
T ss_pred EEEC--CCChhHHHH--HHHHHHHHHHhc
Confidence 3466 899999998 888888877763
No 455
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=63.32 E-value=36 Score=23.89 Aligned_cols=73 Identities=15% Similarity=0.071 Sum_probs=51.5
Q ss_pred EEEEEEcCCChhHHhhhHHH----HHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEE--eCceeEEEeCCCCHH
Q 025648 14 VAVLFYASWCPFSRNFRPSF----SVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLL--NSSMRVRYHGSRTLD 87 (250)
Q Consensus 14 vlV~Fya~wC~~C~~~~p~~----e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~--~g~~~~~~~G~~~~~ 87 (250)
-+...|-+|.+.++.++..+ .+++...|++.++..... ..-|.+... +|.+...-....+.+
T Consensus 21 ~l~~~yc~~~~sS~G~R~Fl~~~l~~~k~~NP~v~i~v~~~~------------~~~P~i~a~Y~~G~ek~i~l~n~s~~ 88 (102)
T 1s3a_A 21 EIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECS------------DVQPKLWARYAFGQETNVPLNNFSAD 88 (102)
T ss_dssp EEEEECCSSSCCCHHHHHHHHHTHHHHHHHSTTCCEEEECCC------------SSSCEEEEEESSCCEEEEECTTCCHH
T ss_pred EEEEEEcCCCCCchhHHHHHHHhhHHHHHHCCCceEEEEECC------------CCCCEEEEEECCCCEEEEECCCCCHH
Confidence 36667788988888776654 446667777765544221 257887666 787776666789999
Q ss_pred HHHHHHHHhhC
Q 025648 88 SLVAFYSDVTG 98 (250)
Q Consensus 88 ~l~~fi~~~~~ 98 (250)
+|.+.+..+..
T Consensus 89 eI~~~l~~l~~ 99 (102)
T 1s3a_A 89 QVTRALENVLS 99 (102)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988754
No 456
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=62.93 E-value=2.1 Score=31.28 Aligned_cols=25 Identities=12% Similarity=0.105 Sum_probs=20.0
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFV 154 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~ 154 (250)
.+++ +||++|+.+ .|.+..++..|.
T Consensus 34 ~F~a--~wC~~C~~~--~~~l~~l~~~~~ 58 (144)
T 1o73_A 34 YFSA--SWCPPCRGF--TPVLAEFYEKHH 58 (144)
T ss_dssp EEEC--TTCHHHHHH--HHHHHHHHHHHT
T ss_pred EEEC--cCCHHHHHH--HHHHHHHHHHhc
Confidence 3466 899999999 888888877654
No 457
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=62.83 E-value=4 Score=29.78 Aligned_cols=21 Identities=19% Similarity=0.256 Sum_probs=17.8
Q ss_pred EEEEEcCCChhHHhhhHHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSV 35 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~ 35 (250)
+..|+.|+|+.|++....+++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~ 26 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN 26 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 456889999999999888775
No 458
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=61.77 E-value=1.6 Score=33.34 Aligned_cols=25 Identities=12% Similarity=0.145 Sum_probs=20.6
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFV 154 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~ 154 (250)
.+++ +||++|+.. .|.+.+++..|.
T Consensus 54 ~F~a--~wC~~C~~~--~p~l~~l~~~~~ 78 (165)
T 3s9f_A 54 YFSA--SWCPPCRGF--TPQLVEFYEKHH 78 (165)
T ss_dssp EEEC--TTCHHHHHH--HHHHHHHHHHHT
T ss_pred EEEC--CcChhHHHH--HHHHHHHHHHhc
Confidence 3466 899999999 899988888764
No 459
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=61.02 E-value=2.5 Score=31.14 Aligned_cols=23 Identities=4% Similarity=-0.158 Sum_probs=18.2
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
+++ +||++|+.+ .|.+..++..|
T Consensus 35 f~~--~~C~~C~~~--~~~l~~l~~~~ 57 (153)
T 2l5o_A 35 FWF--PSCPGCVSE--MPKIIKTANDY 57 (153)
T ss_dssp EEC--TTCTTHHHH--HHHHHHHHHHG
T ss_pred EEC--CCCccHHHH--HHHHHHHHHHh
Confidence 355 899999998 88888777664
No 460
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A
Probab=60.54 E-value=23 Score=27.60 Aligned_cols=75 Identities=16% Similarity=0.208 Sum_probs=47.2
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYS 94 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~ 94 (250)
+..|+.+.||+|.+..-.++...-.| .+..++........+...-..+|++..-+|..+ .+...|.++|.
T Consensus 4 ~~Ly~~~~sp~~~~v~~~l~~~gi~~----~~~~v~~~~~~~~~~~~p~~~vP~l~~~~g~~l------~eS~aI~~yL~ 73 (218)
T 3ir4_A 4 MKLYIYDHCPFCVKARMIFGLKNIPV----ELNVLQNDDEATPTRMIGQKMVPILQKDDSRYL------PESMDIVHYVD 73 (218)
T ss_dssp CEEEECTTCHHHHHHHHHHHHHTCCC----EEEECCTTCCHHHHHHHSSSCSCEEECTTSCEE------ECHHHHHHHHH
T ss_pred EEEEcCCCCchHHHHHHHHHHcCCce----EEEECCCcchhhhhhcCCCceeeeEEEeCCeEe------eCHHHHHHHHH
Confidence 45688999999999887666553222 222223333444445556678898873244322 35788999999
Q ss_pred HhhCC
Q 025648 95 DVTGM 99 (250)
Q Consensus 95 ~~~~~ 99 (250)
+..+.
T Consensus 74 ~~~~~ 78 (218)
T 3ir4_A 74 NLDGK 78 (218)
T ss_dssp HTTSC
T ss_pred HhCCC
Confidence 87653
No 461
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=60.13 E-value=2.4 Score=30.77 Aligned_cols=23 Identities=0% Similarity=-0.213 Sum_probs=18.9
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
+++ +||++|+.+ .|.+..++..|
T Consensus 36 f~~--~~C~~C~~~--~~~l~~l~~~~ 58 (148)
T 2b5x_A 36 FWS--ISCHLCKEA--MPQVNEFRDKY 58 (148)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHHHH
T ss_pred EEc--CCCHHHHHH--hHHHHHHHHHh
Confidence 356 899999998 88888887765
No 462
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=59.77 E-value=1.3 Score=32.08 Aligned_cols=24 Identities=13% Similarity=0.138 Sum_probs=19.1
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
.+++ +||++|+.+ .|.+..++..|
T Consensus 40 ~f~~--~~C~~C~~~--~~~l~~~~~~~ 63 (145)
T 3erw_A 40 HFWT--SWCPPCKKE--LPQFQSFYDAH 63 (145)
T ss_dssp EEEC--SSCHHHHHH--HHHHHHHHHHC
T ss_pred EEEC--CCCHHHHHH--HHHHHHHHHHc
Confidence 3456 899999999 88888887765
No 463
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=59.56 E-value=9.3 Score=29.99 Aligned_cols=28 Identities=21% Similarity=0.363 Sum_probs=25.3
Q ss_pred EEEEEEcCCChhHHhhhHHHHHHHHHcC
Q 025648 14 VAVLFYASWCPFSRNFRPSFSVLSSLYS 41 (250)
Q Consensus 14 vlV~Fya~wC~~C~~~~p~~e~la~~~~ 41 (250)
.+..|+..-||+|....+.++++.+.++
T Consensus 2 ~I~~~~D~~CP~cy~~~~~l~~~~~~~~ 29 (203)
T 2imf_A 2 IVDFYFDFLSPFSYLANQRLSKLAQDYG 29 (203)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcC
Confidence 3678889999999999999999999985
No 464
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=58.55 E-value=2.5 Score=31.73 Aligned_cols=23 Identities=13% Similarity=0.212 Sum_probs=18.7
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
+++ +||++|+.. .|.+..++..|
T Consensus 44 F~~--~~C~~C~~~--~~~l~~l~~~~ 66 (165)
T 3ha9_A 44 FMA--AWCPSCVYM--ADLLDRLTEKY 66 (165)
T ss_dssp EEC--TTCTTHHHH--HHHHHHHHHHC
T ss_pred EEC--CCCcchhhh--HHHHHHHHHHc
Confidence 456 899999999 88888887764
No 465
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=57.51 E-value=2.1 Score=30.69 Aligned_cols=23 Identities=13% Similarity=0.017 Sum_probs=18.4
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
+++ +||++|+.+ .|.+..++..|
T Consensus 31 f~~--~~C~~C~~~--~~~l~~~~~~~ 53 (136)
T 1lu4_A 31 FWT--PWCPFCNAE--APSLSQVAAAN 53 (136)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHHHC
T ss_pred EEC--CcChhHHHH--HHHHHHHHHHC
Confidence 355 899999998 88888877654
No 466
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=55.38 E-value=3.6 Score=30.19 Aligned_cols=23 Identities=9% Similarity=0.158 Sum_probs=18.0
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
+++ +||++|+.+ .|.+..++..|
T Consensus 37 f~~--~~C~~C~~~--~~~l~~l~~~~ 59 (152)
T 2lja_A 37 VWA--TWCGPCRGE--LPALKELEEKY 59 (152)
T ss_dssp ECC--SSCCGGGGT--HHHHHHHHHHS
T ss_pred EEC--CcCHhHHHH--hHHHHHHHHHh
Confidence 355 899999998 88887777654
No 467
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=55.34 E-value=2.4 Score=31.28 Aligned_cols=23 Identities=9% Similarity=-0.002 Sum_probs=18.8
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
+++ +||++|+.+ .|.+..++..|
T Consensus 33 F~~--~~C~~C~~~--~~~l~~~~~~~ 55 (151)
T 2f9s_A 33 FWG--TWCEPCKKE--FPYMANQYKHF 55 (151)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHHHH
T ss_pred EEC--CCCHHHHHH--HHHHHHHHHHh
Confidence 355 899999998 88888887765
No 468
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=54.22 E-value=3.4 Score=30.34 Aligned_cols=23 Identities=9% Similarity=0.052 Sum_probs=19.0
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
+++ +||++|+.. .|.+..++..|
T Consensus 35 f~~--~~C~~C~~~--~~~l~~l~~~~ 57 (152)
T 3gl3_A 35 FWA--SWCGPCRQS--FPWMNQMQAKY 57 (152)
T ss_dssp EEC--TTCTHHHHH--HHHHHHHHHHH
T ss_pred EEC--CcCHHHHHH--HHHHHHHHHHh
Confidence 355 899999998 88888888776
No 469
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=53.71 E-value=2.6 Score=32.34 Aligned_cols=26 Identities=4% Similarity=0.097 Sum_probs=20.4
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFVL 155 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~~ 155 (250)
.+++ +||++|+.. .|.+..++..|..
T Consensus 65 ~F~a--~~C~~C~~~--~~~l~~l~~~~~~ 90 (183)
T 3lwa_A 65 NAWG--QWCAPCRSE--SDDLQIIHEELQA 90 (183)
T ss_dssp EEEC--TTCHHHHHH--HHHHHHHHHHHHH
T ss_pred EEEC--CcCHhHHHH--HHHHHHHHHHHHh
Confidence 3466 899999998 8888888877643
No 470
>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}
Probab=53.22 E-value=41 Score=26.10 Aligned_cols=75 Identities=13% Similarity=0.092 Sum_probs=47.9
Q ss_pred eEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcC-CCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHH
Q 025648 13 YVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES-AIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVA 91 (250)
Q Consensus 13 ~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~-~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~ 91 (250)
..+.+|+.++||.|.+.+=.++...-.| .+..++. +..+++.+...-..+|++. -+|..+ .+...|.+
T Consensus 5 ~~~~Ly~~~~sp~~~~v~~~L~~~gi~~----e~~~v~~~~~~~~~~~~~P~g~vP~L~-~~g~~l------~eS~aI~~ 73 (216)
T 3lyk_A 5 SVMTLFSNKDDIYCHQVKIVLAEKGVLY----ENAEVDLQALPEDLMELNPYGTVPTLV-DRDLVL------FNSRIIME 73 (216)
T ss_dssp -CEEEEECTTCHHHHHHHHHHHHHTCCC----EEEECCTTSCCHHHHHHCTTCCSCEEE-ETTEEE------ESHHHHHH
T ss_pred ceEEEEeCCCChhHHHHHHHHHHcCCCc----EEEeCCcccCcHHHHhhCCCCCcCeEE-ECCeEe------cCHHHHHH
Confidence 3477899999999999886666543222 2222232 2345565555667899987 344322 35678999
Q ss_pred HHHHhhC
Q 025648 92 FYSDVTG 98 (250)
Q Consensus 92 fi~~~~~ 98 (250)
+|.+..+
T Consensus 74 yL~~~~~ 80 (216)
T 3lyk_A 74 YLDERFP 80 (216)
T ss_dssp HHHHHSC
T ss_pred HHHHhCC
Confidence 9998875
No 471
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=52.79 E-value=2.1 Score=31.83 Aligned_cols=25 Identities=8% Similarity=-0.239 Sum_probs=19.1
Q ss_pred CCCCCCcCCCChhh-hcCchHHHHHHHHHH
Q 025648 126 EESCPFSWARSPEN-LLQQETYLALATAFV 154 (250)
Q Consensus 126 ~~~~~~pw~~~ck~-~~~~~~~~~lA~~f~ 154 (250)
.+++ +||++|.. + .|.+..++..|.
T Consensus 36 ~F~a--~~C~~C~~e~--~~~l~~l~~~~~ 61 (160)
T 3lor_A 36 EVFQ--MLCPGCVNHG--VPQAQKIHRMID 61 (160)
T ss_dssp EEEC--TTCHHHHHTH--HHHHHHHHHHSC
T ss_pred EEEc--CCCcchhhhh--hHHHHHHHHHhC
Confidence 3466 89999998 7 788888877653
No 472
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=52.48 E-value=3.2 Score=30.54 Aligned_cols=22 Identities=14% Similarity=0.146 Sum_probs=16.4
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALAT 151 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~ 151 (250)
.+++ +||++|+.+ .|.+..++.
T Consensus 48 ~f~~--~~C~~C~~~--~~~l~~l~~ 69 (156)
T 1kng_A 48 NVWA--SWCVPCHDE--APLLTELGK 69 (156)
T ss_dssp EEEC--TTCHHHHHH--HHHHHHHTT
T ss_pred EEEc--ccCHhHHHH--HHHHHHHHh
Confidence 3466 899999988 777776653
No 473
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=51.79 E-value=2.9 Score=30.82 Aligned_cols=24 Identities=13% Similarity=-0.035 Sum_probs=19.8
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
.+++ +||++|+.. .|.+..++..|
T Consensus 36 ~f~~--~~C~~C~~~--~~~l~~l~~~~ 59 (154)
T 3ia1_A 36 VFWA--SWCTVCKAE--FPGLHRVAEET 59 (154)
T ss_dssp EEEC--TTCHHHHHH--HHHHHHHHHHH
T ss_pred EEEc--ccChhHHHH--HHHHHHHHHHc
Confidence 3466 899999999 88888888776
No 474
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=51.32 E-value=64 Score=23.04 Aligned_cols=36 Identities=17% Similarity=0.323 Sum_probs=27.1
Q ss_pred hHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHH
Q 025648 56 SILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFY 93 (250)
Q Consensus 56 ~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi 93 (250)
++.+++|+..+|.+++ +|+.+. .....+.++|.+|+
T Consensus 66 ~~L~~~G~~~LP~~~V-DGevv~-~G~yPt~eEl~~~l 101 (106)
T 3ktb_A 66 DFLQKHGADALPITLV-DGEIAV-SQTYPTTKQMSEWT 101 (106)
T ss_dssp HHHHTTCGGGCSEEEE-TTEEEE-CSSCCCHHHHHHHH
T ss_pred HHHHHcCcccCCEEEE-CCEEEE-eccCCCHHHHHHHh
Confidence 6778899999999987 665432 23357899998886
No 475
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=51.25 E-value=2.6 Score=31.70 Aligned_cols=21 Identities=10% Similarity=0.157 Sum_probs=17.1
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHH
Q 025648 127 ESCPFSWARSPENLLQQETYLALAT 151 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~ 151 (250)
+++ +||++|+.+ .|.+..++.
T Consensus 58 F~a--~~C~~C~~~--~~~l~~l~~ 78 (168)
T 2b1k_A 58 VWA--TWCPTCRAE--HQYLNQLSA 78 (168)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHH
T ss_pred EEC--CCCHHHHHH--HHHHHHHHH
Confidence 366 899999998 888887765
No 476
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=51.05 E-value=5.4 Score=30.63 Aligned_cols=26 Identities=8% Similarity=-0.101 Sum_probs=20.4
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFVL 155 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~~ 155 (250)
.+++ +||+.|... .|.+.+++..|..
T Consensus 55 ~F~a--twC~~C~~~--~p~l~~l~~~~~~ 80 (181)
T 2p31_A 55 VNVA--SECGFTDQH--YRALQQLQRDLGP 80 (181)
T ss_dssp EEEC--SSSTTHHHH--HHHHHHHHHHHGG
T ss_pred EEec--cCCCCcHHH--HHHHHHHHHHhhc
Confidence 3466 899999988 8888888877654
No 477
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=50.49 E-value=34 Score=30.46 Aligned_cols=55 Identities=11% Similarity=0.155 Sum_probs=40.8
Q ss_pred CCEEEEEcCCCCh---hHHHhhCCC-----ccCeEEEE-eCceeEEEeCCCCHHHHHHHHHHhh
Q 025648 43 IPHFAIEESAIRP---SILSKYGVH-----GFPTLFLL-NSSMRVRYHGSRTLDSLVAFYSDVT 97 (250)
Q Consensus 43 ~~~v~~~d~~~~~---~l~~~~~I~-----~~PTi~l~-~g~~~~~~~G~~~~~~l~~fi~~~~ 97 (250)
-..+++.-|-.|- .--..+||. +-|...+| +|+.+....+..-.++|.+.|+++.
T Consensus 335 ~l~VAVMGCvVNGPGEa~~ADiGi~~~G~G~~~~~~lf~~G~~~~~v~~~~iv~~l~~~i~~~~ 398 (406)
T 4g9p_A 335 ELKVAVMGCVVNGPGESKHAHIGISLPGAGEEPKAPVYADGKLLTILKGEGIAEEFLRLVEDYV 398 (406)
T ss_dssp GCEEEEESSTTTHHHHHHHSSEEEECCCTTSCSEEEEEETTEEEEEEESSCHHHHHHHHHHHHH
T ss_pred CCEEEEECCcccCcchhhhcCcCcccCCCCCCCeeeEEECCEEEEecCHHHHHHHHHHHHHHHH
Confidence 3688998887763 223457774 57888888 8998888888877788887777654
No 478
>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}
Probab=50.46 E-value=23 Score=27.99 Aligned_cols=75 Identities=13% Similarity=0.135 Sum_probs=44.0
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYS 94 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~ 94 (250)
+=+||++.||+|++.+=.+++..-.| ..+.++-.+..+++.+..-.-.+|+++.=+|..+ .+...|.++|.
T Consensus 23 MKLy~~~~SP~~~rVr~~L~e~gi~~---e~~~v~~~~~~~~~~~~nP~gkVPvL~~~dG~~l------~ES~aI~~YL~ 93 (225)
T 4glt_A 23 MKLLYSNTSPYARKVRVVAAEKRIDV---DMVLVVLADPECPVADHNPLGKIPVLILPDGESL------YDSRVIVEYLD 93 (225)
T ss_dssp CEEEECSSCHHHHHHHHHHHHHTCCC---EEEECCTTCSSSCGGGTCTTCCSCEEECTTSCEE------CSHHHHHHHHH
T ss_pred ceEecCCCCHHHHHHHHHHHHhCCCC---EEEEeCCCCCCHHHHHhCCCCCCCEEEeCCCCEE------eehHHHHHHHH
Confidence 34789999999999887666543222 1222221222233333323456898764244322 46788999998
Q ss_pred HhhC
Q 025648 95 DVTG 98 (250)
Q Consensus 95 ~~~~ 98 (250)
+..+
T Consensus 94 ~~~~ 97 (225)
T 4glt_A 94 HRTP 97 (225)
T ss_dssp TTCS
T ss_pred HhCC
Confidence 8764
No 479
>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A
Probab=50.36 E-value=60 Score=26.44 Aligned_cols=78 Identities=15% Similarity=0.213 Sum_probs=47.8
Q ss_pred CeEEEEE--------EcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCC
Q 025648 12 EYVAVLF--------YASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGS 83 (250)
Q Consensus 12 ~~vlV~F--------ya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~ 83 (250)
.+-+..| ..++||+|++..=.+++..-.| ..+.++-....+.+.+...-..+|++.. +|..+
T Consensus 16 ~~~i~ly~~~~~~~~~~~~~p~~~rv~~~L~~~gi~y---e~~~v~~~~~~~~~~~~nP~gkVPvL~~-~g~~l------ 85 (267)
T 2ahe_A 16 EPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVF---SVTTVDLKRKPADLQNLAPGTHPPFITF-NSEVK------ 85 (267)
T ss_dssp CCCEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCC---EEEEECTTSCCHHHHHHSTTCCSCEEEE-TTEEE------
T ss_pred CCCEEEEEecCCCccCCCCCchHHHHHHHHHHcCCCC---EEEEeCcccChHHHHHhCCCCCCCEEEE-CCEEe------
Confidence 3456666 5789999998886666543222 2222221122345555555668998873 44321
Q ss_pred CCHHHHHHHHHHhhCC
Q 025648 84 RTLDSLVAFYSDVTGM 99 (250)
Q Consensus 84 ~~~~~l~~fi~~~~~~ 99 (250)
.+...|.++|.+..+.
T Consensus 86 ~ES~aI~~YL~~~~~~ 101 (267)
T 2ahe_A 86 TDVNKIEEFLEEVLCP 101 (267)
T ss_dssp CCHHHHHHHHHHHSCT
T ss_pred cCHHHHHHHHHHhcCC
Confidence 4678999999998764
No 480
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*
Probab=50.23 E-value=44 Score=26.72 Aligned_cols=70 Identities=10% Similarity=0.126 Sum_probs=39.0
Q ss_pred EcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCC-CChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHHHhh
Q 025648 19 YASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESA-IRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYSDVT 97 (250)
Q Consensus 19 ya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~-~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~~~~ 97 (250)
+.++||+|++..=.++...-.| ..+.+ +.. ..+.+.+...-..+|++. .+|..+ .+...|.++|.+..
T Consensus 26 ~~~~sp~~~rv~~~L~~~gi~y---e~~~v-~~~~~~~~~~~~nP~g~vP~L~-~~g~~l------~ES~aI~~YL~~~~ 94 (247)
T 2r4v_A 26 SIGNCPFCQRLFMILWLKGVKF---NVTTV-DMTRKPEELKDLAPGTNPPFLV-YNKELK------TDFIKIEEFLEQTL 94 (247)
T ss_dssp SBCSCHHHHHHHHHHHHHTCCC---EEEEE-CCC----------CCSSSCEEE-ETTEEE------CCHHHHHHHHHHHS
T ss_pred cCCCChhHHHHHHHHHHcCCCc---EEEEc-CcccchHHHHHhCCCCCCCEEE-ECCEec------cCHHHHHHHHHHhc
Confidence 6899999999887666543322 12222 221 122333334456789887 344321 46789999999887
Q ss_pred CC
Q 025648 98 GM 99 (250)
Q Consensus 98 ~~ 99 (250)
+.
T Consensus 95 ~~ 96 (247)
T 2r4v_A 95 AP 96 (247)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 481
>4dej_A Glutathione S-transferase related protein; transferase-like protein, transcription regulation; 2.90A {Idiomarina loihiensis}
Probab=49.84 E-value=47 Score=26.28 Aligned_cols=77 Identities=10% Similarity=0.015 Sum_probs=49.2
Q ss_pred CCeEEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcC-CCChhHHHhhCC-CccCeEEEEeCceeEEEeCCCCHHH
Q 025648 11 HEYVAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES-AIRPSILSKYGV-HGFPTLFLLNSSMRVRYHGSRTLDS 88 (250)
Q Consensus 11 ~~~vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~-~~~~~l~~~~~I-~~~PTi~l~~g~~~~~~~G~~~~~~ 88 (250)
.+..+.+|+.+.||.|.+.+-.++...-.| .+..++. ...+++.....- ..+|++. -+|..+ .+...
T Consensus 9 ~~~~~~Ly~~~~sp~~~~vr~~L~~~gi~~----e~~~v~~~~~~~~~~~~nP~~g~vPvL~-~~g~~l------~eS~a 77 (231)
T 4dej_A 9 KRSVMTLYSGKDDLKSHQVRLVLAEKGVGV----EITYVTDESTPEDLLQLNPYPEAKPTLV-DRELVL------YNAQI 77 (231)
T ss_dssp CCSSCEEEECSSCHHHHHHHHHHHHHTCBC----EEEECCSSCCCHHHHHHCCSSSCCSEEE-ETTEEE------ESHHH
T ss_pred CCceEEEEcCCCChHHHHHHHHHHHcCCCc----EEEEcCcccCCHHHHHhCCCCCCCCEEE-ECCEEE------EcHHH
Confidence 345577899999999999887776653332 2222232 234556555555 6799987 244222 35678
Q ss_pred HHHHHHHhhC
Q 025648 89 LVAFYSDVTG 98 (250)
Q Consensus 89 l~~fi~~~~~ 98 (250)
|.++|.+..+
T Consensus 78 I~~YL~~~~~ 87 (231)
T 4dej_A 78 IMEYLDERFP 87 (231)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHHCC
Confidence 9999998765
No 482
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=48.99 E-value=65 Score=24.74 Aligned_cols=74 Identities=12% Similarity=0.103 Sum_probs=44.5
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYS 94 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~ 94 (250)
+.+++.+.||+|++.+=.+++..-.| ..+.++-....+.+.+..--..+|++.. +|..+ .+...|.++|.
T Consensus 4 m~LY~~~~sP~~~rvr~~L~e~gi~~---e~~~v~~~~~~~~~~~~nP~g~vPvL~~-~~~~l------~ES~aI~~yL~ 73 (210)
T 4hoj_A 4 MTLYSGITCPFSHRCRFVLYEKGMDF---EIKDIDIYNKPEDLAVMNPYNQVPVLVE-RDLVL------HESNIINEYID 73 (210)
T ss_dssp CEEEECTTCHHHHHHHHHHHHHTCCC---EEEECCTTSCCHHHHHHCTTCCSCEEEE-TTEEE------ESHHHHHHHHH
T ss_pred EEEecCCCChHHHHHHHHHHHcCCCC---EEEEeCCCCCCHHHHHHCCCCCCcEEEE-CCEEE------eccHHHHHHHH
Confidence 34678899999999876665543222 1222221223344555555667998763 44332 25678999998
Q ss_pred HhhC
Q 025648 95 DVTG 98 (250)
Q Consensus 95 ~~~~ 98 (250)
+..+
T Consensus 74 ~~~~ 77 (210)
T 4hoj_A 74 ERFP 77 (210)
T ss_dssp HHSC
T ss_pred Hhcc
Confidence 8764
No 483
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=48.94 E-value=6.2 Score=29.44 Aligned_cols=26 Identities=8% Similarity=-0.129 Sum_probs=20.1
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFVL 155 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~~ 155 (250)
.+++ +||+.|... .|.+..++..|..
T Consensus 38 ~f~a--~~C~~C~~~--~~~l~~l~~~~~~ 63 (170)
T 2p5q_A 38 VNVA--SKCGMTNSN--YAEMNQLYEKYKD 63 (170)
T ss_dssp EEEC--SSSTTHHHH--HHHHHHHHHHHGG
T ss_pred EEEe--ccCCccHHH--HHHHHHHHHHhcc
Confidence 3466 899999988 8888888777643
No 484
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=48.70 E-value=6.3 Score=29.37 Aligned_cols=26 Identities=8% Similarity=-0.019 Sum_probs=19.8
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFVL 155 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~~ 155 (250)
.+++ +||++|... .|.+..+...|..
T Consensus 37 ~f~a--~~C~~C~~~--~~~l~~l~~~~~~ 62 (169)
T 2v1m_A 37 VNVA--CKCGATDKN--YRQLQEMHTRLVG 62 (169)
T ss_dssp EEEC--SSSTTHHHH--HHHHHHHHHHHGG
T ss_pred EEee--ccCCchHHH--HHHHHHHHHHhhc
Confidence 3466 899999887 7888888776643
No 485
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=47.81 E-value=8.8 Score=29.31 Aligned_cols=26 Identities=12% Similarity=-0.093 Sum_probs=20.6
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFVL 155 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~~ 155 (250)
.+|+ +||+.|... .|.+..++..|..
T Consensus 44 ~F~a--twC~~C~~~--~p~l~~l~~~~~~ 69 (180)
T 3kij_A 44 VNVA--SDCQLTDRN--YLGLKELHKEFGP 69 (180)
T ss_dssp EEEC--SSSTTHHHH--HHHHHHHHHHHTT
T ss_pred EEEe--cCCCCcHHH--HHHHHHHHHHhcc
Confidence 3466 899999998 8888888877653
No 486
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=47.46 E-value=76 Score=22.80 Aligned_cols=37 Identities=16% Similarity=0.358 Sum_probs=27.7
Q ss_pred hHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHH
Q 025648 56 SILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYS 94 (250)
Q Consensus 56 ~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~ 94 (250)
++.+++|+..+|.+++ +|+.+. ....-+.++|.+|+.
T Consensus 63 ~~L~~~G~~~LP~~~V-DGevv~-~G~yPt~eEl~~~lg 99 (110)
T 3kgk_A 63 AFIEASGAEGLPLLLL-DGETVM-AGRYPKRAELARWFG 99 (110)
T ss_dssp HHHHHHCGGGCCEEEE-TTEEEE-ESSCCCHHHHHHHHT
T ss_pred HHHHHcCcccCCEEEE-CCEEEE-eccCCCHHHHHHHhC
Confidence 6788899999999987 665433 233578999988764
No 487
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=46.30 E-value=7 Score=31.08 Aligned_cols=27 Identities=11% Similarity=-0.081 Sum_probs=21.2
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFVLL 156 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~~~ 156 (250)
.+|+ .||+.|... .|.+.+++..|...
T Consensus 53 ~Fwa--twC~~C~~e--~p~l~~l~~~~~~~ 79 (208)
T 2f8a_A 53 ENVA--SLGGTTVRD--YTQMNELQRRLGPR 79 (208)
T ss_dssp EEEC--SSSTTHHHH--HHHHHHHHHHHGGG
T ss_pred EEEC--CCCccHHHH--HHHHHHHHHHccCC
Confidence 3467 899999987 78888888877543
No 488
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=45.54 E-value=3.2 Score=30.98 Aligned_cols=23 Identities=17% Similarity=0.170 Sum_probs=19.3
Q ss_pred CCCCCcCCCChhhhcCchHHHHHHHHH
Q 025648 127 ESCPFSWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 127 ~~~~~pw~~~ck~~~~~~~~~~lA~~f 153 (250)
+++ +||++|+.. .|.+..++..|
T Consensus 48 F~~--~~C~~C~~~--~~~l~~~~~~~ 70 (158)
T 3hdc_A 48 FWA--SWCPYCRDE--MPSMDRLVKSF 70 (158)
T ss_dssp EEC--TTCHHHHHH--HHHHHHHHHHS
T ss_pred EEC--CcCHHHHHH--HHHHHHHHHHc
Confidence 356 899999998 88888888876
No 489
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=45.19 E-value=6.9 Score=30.25 Aligned_cols=27 Identities=15% Similarity=-0.066 Sum_probs=21.2
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFVLL 156 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~~~ 156 (250)
.+|+ .||+.|... .|.+..+...|...
T Consensus 52 ~F~a--twC~~C~~~--~p~l~~l~~~~~~~ 78 (187)
T 3dwv_A 52 YNVA--SKCGYTKGG--YETATTLYNKYKSQ 78 (187)
T ss_dssp EEEC--CBCSCCTTH--HHHHHHHHHHHGGG
T ss_pred EEec--CCCCCcHHH--HHHHHHHHHHhhhC
Confidence 3466 899999998 88888888877543
No 490
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=43.62 E-value=17 Score=28.97 Aligned_cols=28 Identities=25% Similarity=0.287 Sum_probs=24.7
Q ss_pred eEEEEEEcCCChhHHhhhHHHHHHHHHc
Q 025648 13 YVAVLFYASWCPFSRNFRPSFSVLSSLY 40 (250)
Q Consensus 13 ~vlV~Fya~wC~~C~~~~p~~e~la~~~ 40 (250)
..+..|+..-||+|....+.++++.+.+
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~~ 33 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHLW 33 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTS
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHHc
Confidence 4578888999999999999999998776
No 491
>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1; glutathione-S-tranferase superfamily, chloride ION channel, metal transport; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A 3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A
Probab=43.59 E-value=94 Score=24.63 Aligned_cols=78 Identities=13% Similarity=0.192 Sum_probs=46.4
Q ss_pred CeEEEEEEcC--------CChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCC
Q 025648 12 EYVAVLFYAS--------WCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGS 83 (250)
Q Consensus 12 ~~vlV~Fya~--------wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~ 83 (250)
++-+..|+.+ .||+|++.+-.++...-.| ..+.++-....+++.+......+|++. -+|..+
T Consensus 5 ~~~~~Ly~~~~~~g~~~~~sp~~~rv~~~L~~~gi~y---e~~~v~~~~~~~~~~~~nP~g~VPvL~-~~g~~l------ 74 (241)
T 1k0m_A 5 QPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTF---NVTTVDTKRRTETVQKLCPGGELPFLL-YGTEVH------ 74 (241)
T ss_dssp -CCEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCC---EEEEECTTSCCHHHHHHCTTCCSSEEE-ETTEEE------
T ss_pred CCceEEEeecCCCCCCCCCCHHHHHHHHHHHHcCCcc---EEEEcCCcccHHHHHHhCCCCCCCEEE-ECCEEe------
Confidence 3444556655 8999999876666543222 222222122345555555567899986 233222
Q ss_pred CCHHHHHHHHHHhhCC
Q 025648 84 RTLDSLVAFYSDVTGM 99 (250)
Q Consensus 84 ~~~~~l~~fi~~~~~~ 99 (250)
.+...|.++|.+..+.
T Consensus 75 ~eS~aI~~yL~~~~~~ 90 (241)
T 1k0m_A 75 TDTNKIEEFLEAVLCP 90 (241)
T ss_dssp ECHHHHHHHHHHHSCT
T ss_pred cCHHHHHHHHHHhcCC
Confidence 3678899999998753
No 492
>3ubk_A Glutathione transferase; GSH binding; 1.95A {Leptospira interrogans serovar lai} PDB: 3ubl_A*
Probab=42.89 E-value=41 Score=26.68 Aligned_cols=74 Identities=12% Similarity=0.100 Sum_probs=47.7
Q ss_pred EEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcCCCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHHHH
Q 025648 15 AVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEESAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAFYS 94 (250)
Q Consensus 15 lV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~fi~ 94 (250)
+.+++.++|+.|++.+-.++...-.|..+ .++....+++.....-..+|++.. ++.. -.+...|.++|.
T Consensus 4 ~~Ly~~~~sp~~~~v~~~L~~~gi~ye~~----~v~~~~~~~~~~~nP~g~vPvL~~-~~~~------l~eS~aI~~YL~ 72 (242)
T 3ubk_A 4 IKLHGASISNYVNKVKLGILEKGLEYEQI----RIAPSQEEDFLKISPMGKIPVLEM-DGKF------IFESGAILEFLD 72 (242)
T ss_dssp EEEESCTTCHHHHHHHHHHHHHTCCEEEE----CCCCCCCHHHHTTSTTCCSCEEEE-TTEE------ECCHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEE----ecCCccCHHHHhcCCCCCcCeEEE-CCce------EecHHHHHHHHH
Confidence 56788999999999887777654333211 112233456655555567898864 4332 246788999999
Q ss_pred HhhCC
Q 025648 95 DVTGM 99 (250)
Q Consensus 95 ~~~~~ 99 (250)
+..+.
T Consensus 73 ~~~~~ 77 (242)
T 3ubk_A 73 TIFPQ 77 (242)
T ss_dssp HHCCC
T ss_pred HhCCC
Confidence 88753
No 493
>4iel_A Glutathione S-transferase, N-terminal domain PROT; GST, glutathione S-transferase, enzyme function initiative, structural genomics; HET: GSH; 1.60A {Burkholderia ambifaria}
Probab=42.85 E-value=31 Score=27.18 Aligned_cols=78 Identities=8% Similarity=-0.010 Sum_probs=46.4
Q ss_pred EEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEc-CCCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHH
Q 025648 14 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEE-SAIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAF 92 (250)
Q Consensus 14 vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d-~~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~f 92 (250)
.+.+|+.++|++|.+.+=.++...-.|..+ .+.... ....+++.+...-..+|++.. +|..+ .+...|.++
T Consensus 23 m~~Ly~~~~sp~~~~vr~~L~~~gi~ye~~-~v~~~~~~~~~~~~~~~~P~g~vP~L~~-~g~~l------~eS~aI~~y 94 (229)
T 4iel_A 23 MLHILGKIPSINVRKVLWLCTELNLPFEQE-DWGAGFRTTNDPAYLALNPNGLVPVIKD-DGFVL------WESNTIIRY 94 (229)
T ss_dssp CEEEESCTTCHHHHHHHHHHHHHTCCEEEE-CCC-------CHHHHTTCTTCCSCEEEE-TTEEE------ECHHHHHHH
T ss_pred eEEEecCCCCcchHHHHHHHHHCCCCcEEE-EecCCcCCcCCHHHHhcCCCCCCCEEEE-CCEEE------EeHHHHHHH
Confidence 467788999999999887776654333211 011100 112345554445567899875 44322 356789999
Q ss_pred HHHhhCC
Q 025648 93 YSDVTGM 99 (250)
Q Consensus 93 i~~~~~~ 99 (250)
|.+..+.
T Consensus 95 L~~~~~~ 101 (229)
T 4iel_A 95 LANRYGG 101 (229)
T ss_dssp HHHHHCC
T ss_pred HHHhcCC
Confidence 9998763
No 494
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=41.69 E-value=9.3 Score=29.22 Aligned_cols=26 Identities=12% Similarity=0.043 Sum_probs=20.2
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFVL 155 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~~ 155 (250)
.+++ +||+.|... .|.+.++...|..
T Consensus 53 ~F~a--twC~~C~~~--~~~l~~l~~~~~~ 78 (183)
T 2obi_A 53 TNVA--SQCGKTEVN--YTQLVDLHARYAE 78 (183)
T ss_dssp EEEC--SSSTTHHHH--HHHHHHHHHHHGG
T ss_pred EEeC--CCCCCcHHH--HHHHHHHHHHHhc
Confidence 3366 899999988 8888888877654
No 495
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=41.63 E-value=6 Score=30.49 Aligned_cols=25 Identities=16% Similarity=0.276 Sum_probs=19.6
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFV 154 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~ 154 (250)
.+++ +||++|+.. .|.+..++..|.
T Consensus 52 ~F~a--~~C~~C~~~--~~~l~~l~~~~~ 76 (196)
T 2ywi_A 52 MFIC--NHCPFVKHV--QHELVRLANDYM 76 (196)
T ss_dssp EECC--SSCHHHHHH--HHHHHHHHHHHG
T ss_pred EEeC--CCCccHHHH--HHHHHHHHHHHH
Confidence 3366 899999988 888888877664
No 496
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=41.51 E-value=9.3 Score=29.49 Aligned_cols=26 Identities=15% Similarity=-0.049 Sum_probs=19.9
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFVL 155 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~~ 155 (250)
.+++ +||+.|... .|.+.++...|..
T Consensus 54 ~F~a--twC~~C~~~--~~~l~~l~~~~~~ 79 (190)
T 2vup_A 54 YNVA--SKCGYTKGG--YETATTLYNKYKS 79 (190)
T ss_dssp EEEC--SSSTTHHHH--HHHHHHHHHHHGG
T ss_pred EEec--CCCCccHHH--HHHHHHHHHHHhc
Confidence 3366 899999887 7888888777643
No 497
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=40.21 E-value=8.7 Score=28.95 Aligned_cols=25 Identities=12% Similarity=-0.109 Sum_probs=18.9
Q ss_pred CCCCCCcCCCChhhhcCchHHHHHHHHHHH
Q 025648 126 EESCPFSWARSPENLLQQETYLALATAFVL 155 (250)
Q Consensus 126 ~~~~~~pw~~~ck~~~~~~~~~~lA~~f~~ 155 (250)
.+++ +||+.|+ . .|.+..+...|..
T Consensus 38 ~F~a--~wC~~C~-~--~~~l~~l~~~~~~ 62 (171)
T 3cmi_A 38 VNVA--SKCGFTP-Q--YKELEALYKRYKD 62 (171)
T ss_dssp EEEE--SSSCCHH-H--HHHHHHHHHHHGG
T ss_pred EEEe--cCCCcch-h--HHHHHHHHHHhcc
Confidence 3466 8999999 7 7888888776643
No 498
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=39.36 E-value=4.5 Score=31.76 Aligned_cols=20 Identities=15% Similarity=0.178 Sum_probs=16.7
Q ss_pred cCCCChhhhcCchHHHHHHHHH
Q 025648 132 SWARSPENLLQQETYLALATAF 153 (250)
Q Consensus 132 pw~~~ck~~~~~~~~~~lA~~f 153 (250)
+||+||+++ .|.+..+...+
T Consensus 34 ~~Cp~C~~~--~~~l~~~~~~~ 53 (193)
T 3hz8_A 34 YFCPHCAHL--EPVLSKHAKSF 53 (193)
T ss_dssp TTCHHHHHH--HHHHHHHHTTC
T ss_pred CCChhHHHH--HHHHHHHHHHC
Confidence 899999999 88888777654
No 499
>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET: CIT; 2.02A {Yersinia pestis}
Probab=39.35 E-value=1.3e+02 Score=23.04 Aligned_cols=74 Identities=14% Similarity=0.095 Sum_probs=45.2
Q ss_pred EEEEEEcCCChhHHhhhHHHHHHHHHcCCCCEEEEEcC-CCChhHHHhhCCCccCeEEEEeCceeEEEeCCCCHHHHHHH
Q 025648 14 VAVLFYASWCPFSRNFRPSFSVLSSLYSSIPHFAIEES-AIRPSILSKYGVHGFPTLFLLNSSMRVRYHGSRTLDSLVAF 92 (250)
Q Consensus 14 vlV~Fya~wC~~C~~~~p~~e~la~~~~~~~~v~~~d~-~~~~~l~~~~~I~~~PTi~l~~g~~~~~~~G~~~~~~l~~f 92 (250)
.+.+++.+.|+.|.+..=.++...-.| .+..++. ...+++.+......+|++.. +|..+ .+...|..+
T Consensus 10 ~~~Ly~~~~s~~~~~v~~~L~~~gi~~----e~~~v~~~~~~~~~~~~~P~g~vP~L~~-~g~~l------~eS~aI~~y 78 (213)
T 1yy7_A 10 VMTLFSGPTDIFSHQVRIVLAEKGVSV----EIEQVEADNLPQDLIDLNPYRTVPTLVD-RELTL------YESRIIMEY 78 (213)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHHTCCE----EEEECCTTSCCHHHHHHCTTCCSSEEEE-TTEEE------ESHHHHHHH
T ss_pred ceEEEcCCCChhHHHHHHHHHHcCCCC----eEEeCCcccCcHHHHHHCCCCCCCEEEE-CCEEE------ecHHHHHHH
Confidence 367788999999999876666543222 1122222 22345555555567998872 33221 367789999
Q ss_pred HHHhhC
Q 025648 93 YSDVTG 98 (250)
Q Consensus 93 i~~~~~ 98 (250)
|.+..+
T Consensus 79 L~~~~~ 84 (213)
T 1yy7_A 79 LDERFP 84 (213)
T ss_dssp HHHHCC
T ss_pred HHHhCC
Confidence 998764
No 500
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=38.94 E-value=11 Score=27.53 Aligned_cols=24 Identities=13% Similarity=0.221 Sum_probs=19.9
Q ss_pred CCCCCCcCCCC--hhhhcCchHHHHHHHHH
Q 025648 126 EESCPFSWARS--PENLLQQETYLALATAF 153 (250)
Q Consensus 126 ~~~~~~pw~~~--ck~~~~~~~~~~lA~~f 153 (250)
.+|+ +||++ |... .|.+..+...|
T Consensus 39 ~F~a--~~C~~v~C~~~--~~~l~~l~~~~ 64 (150)
T 3fw2_A 39 NFWA--SWNDSISQKQS--NSELREIYKKY 64 (150)
T ss_dssp EEEC--TTCCCHHHHHH--HHHHHHHHHHH
T ss_pred EEEe--CCCCchHHHHH--HHHHHHHHHHh
Confidence 3466 89999 9998 88888888776
Done!