Query 025650
Match_columns 250
No_of_seqs 205 out of 687
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 14:40:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025650.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025650hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vr3_A Acireductone dioxygenas 100.0 3.9E-53 1.3E-57 367.3 20.8 178 10-190 12-189 (191)
2 1zrr_A E-2/E-2' protein; nicke 100.0 3.4E-36 1.2E-40 257.9 7.5 159 17-183 6-176 (179)
3 3h8u_A Uncharacterized conserv 98.9 4.1E-09 1.4E-13 81.0 8.7 82 73-170 40-122 (125)
4 1yfu_A 3-hydroxyanthranilate-3 98.8 8.6E-09 3E-13 88.5 8.7 56 93-149 46-101 (174)
5 1v70_A Probable antibiotics sy 98.8 9.8E-09 3.4E-13 74.6 7.1 60 95-159 41-101 (105)
6 3d0j_A Uncharacterized protein 98.8 7.2E-09 2.4E-13 86.3 6.4 65 92-159 39-107 (140)
7 2b8m_A Hypothetical protein MJ 98.8 1.5E-08 5.1E-13 77.2 6.8 61 95-159 40-100 (117)
8 3fjs_A Uncharacterized protein 98.7 2.4E-08 8.2E-13 77.2 7.7 61 94-159 48-108 (114)
9 1x82_A Glucose-6-phosphate iso 98.7 4.2E-08 1.4E-12 82.8 9.2 65 95-159 86-153 (190)
10 1fi2_A Oxalate oxidase, germin 98.7 7.5E-08 2.6E-12 81.5 10.5 80 69-159 70-153 (201)
11 3d82_A Cupin 2, conserved barr 98.7 1.4E-08 4.8E-13 74.4 5.0 51 94-149 41-92 (102)
12 4e2g_A Cupin 2 conserved barre 98.7 4.4E-08 1.5E-12 75.1 7.9 71 73-159 42-112 (126)
13 1yhf_A Hypothetical protein SP 98.7 3.5E-08 1.2E-12 74.3 6.8 61 75-150 43-103 (115)
14 2o8q_A Hypothetical protein; c 98.7 3E-08 1E-12 77.2 6.5 78 69-159 38-116 (134)
15 4i4a_A Similar to unknown prot 98.7 4.7E-08 1.6E-12 75.1 7.5 60 94-158 46-105 (128)
16 2gu9_A Tetracenomycin polyketi 98.7 3.6E-08 1.2E-12 73.1 6.6 60 95-159 34-96 (113)
17 4b29_A Dimethylsulfoniopropion 98.7 5.2E-08 1.8E-12 86.2 8.4 67 93-166 143-209 (217)
18 2oa2_A BH2720 protein; 1017534 98.7 1.6E-07 5.5E-12 75.1 10.5 65 95-159 56-122 (148)
19 2i45_A Hypothetical protein; n 98.6 1.8E-08 6E-13 75.8 3.9 50 95-148 40-90 (107)
20 2pfw_A Cupin 2, conserved barr 98.6 5.8E-08 2E-12 73.2 6.7 58 95-159 47-104 (116)
21 2ozj_A Cupin 2, conserved barr 98.6 3.8E-08 1.3E-12 74.6 5.7 50 95-149 51-100 (114)
22 3ibm_A Cupin 2, conserved barr 98.6 1.8E-07 6.2E-12 77.4 10.1 61 94-159 68-129 (167)
23 1lr5_A Auxin binding protein 1 98.6 1.6E-07 5.5E-12 75.9 9.2 65 95-159 54-123 (163)
24 3ht1_A REMF protein; cupin fol 98.6 1.1E-07 3.8E-12 73.9 7.9 63 94-159 51-113 (145)
25 1zvf_A 3-hydroxyanthranilate 3 98.6 1E-07 3.5E-12 82.0 8.3 57 93-149 45-104 (176)
26 1vj2_A Novel manganese-contain 98.6 8.7E-08 3E-12 74.6 7.1 60 95-159 61-120 (126)
27 2vqa_A SLL1358 protein, MNCA; 98.5 3.6E-07 1.2E-11 82.4 10.7 77 73-159 53-130 (361)
28 3l2h_A Putative sugar phosphat 98.5 2.2E-07 7.5E-12 74.9 8.3 71 75-159 49-121 (162)
29 2f4p_A Hypothetical protein TM 98.5 1.7E-07 5.7E-12 75.6 7.6 61 95-159 61-121 (147)
30 2vqa_A SLL1358 protein, MNCA; 98.5 5.3E-07 1.8E-11 81.3 10.7 65 95-159 247-312 (361)
31 3rns_A Cupin 2 conserved barre 98.5 2.8E-07 9.7E-12 79.2 8.5 63 73-150 38-100 (227)
32 2bnm_A Epoxidase; oxidoreducta 98.5 6.1E-07 2.1E-11 74.1 9.7 59 97-156 135-194 (198)
33 3kgz_A Cupin 2 conserved barre 98.5 2.1E-07 7.2E-12 76.7 6.7 60 95-159 57-116 (156)
34 1dgw_A Canavalin; duplicated s 98.5 7E-07 2.4E-11 74.6 9.9 75 73-159 42-118 (178)
35 2opk_A Hypothetical protein; p 98.5 1.8E-07 6.3E-12 72.3 5.8 61 96-159 47-108 (112)
36 2fqp_A Hypothetical protein BP 98.5 3E-07 1E-11 68.5 6.8 59 95-156 31-90 (97)
37 2qnk_A 3-hydroxyanthranilate 3 98.5 3.2E-07 1.1E-11 84.0 8.0 58 94-153 43-101 (286)
38 1j58_A YVRK protein; cupin, de 98.5 4.3E-07 1.5E-11 82.9 8.9 75 74-159 81-155 (385)
39 2q30_A Uncharacterized protein 98.5 2.5E-07 8.6E-12 68.5 6.0 60 94-159 45-106 (110)
40 3i7d_A Sugar phosphate isomera 98.5 8.4E-07 2.9E-11 72.9 9.6 71 75-159 46-119 (163)
41 3lwc_A Uncharacterized protein 98.4 3.1E-07 1.1E-11 72.4 6.6 76 73-170 41-116 (119)
42 3jzv_A Uncharacterized protein 98.4 3.6E-07 1.2E-11 76.1 7.3 60 95-159 66-125 (166)
43 1o4t_A Putative oxalate decarb 98.4 6.8E-07 2.3E-11 70.4 8.2 57 95-156 70-127 (133)
44 3rns_A Cupin 2 conserved barre 98.4 9.2E-07 3.1E-11 76.0 9.2 57 94-156 165-221 (227)
45 3cew_A Uncharacterized cupin p 98.4 9.5E-07 3.3E-11 68.0 8.2 75 68-158 23-99 (125)
46 1o5u_A Novel thermotoga mariti 98.4 3.3E-07 1.1E-11 70.7 5.5 49 96-149 44-92 (101)
47 1j58_A YVRK protein; cupin, de 98.4 1.6E-06 5.6E-11 79.0 10.9 65 95-159 270-335 (385)
48 1sef_A Conserved hypothetical 98.4 1.6E-06 5.6E-11 76.4 10.1 58 96-158 196-255 (274)
49 2cav_A Protein (canavalin); vi 98.4 9.2E-07 3.2E-11 84.6 9.2 76 73-159 87-163 (445)
50 1y9q_A Transcriptional regulat 98.4 9E-07 3.1E-11 73.0 7.5 53 96-153 120-172 (192)
51 3h7j_A Bacilysin biosynthesis 98.3 1.1E-06 3.9E-11 76.0 7.4 60 95-159 159-218 (243)
52 4h7l_A Uncharacterized protein 98.3 8.4E-07 2.9E-11 74.8 6.1 55 96-159 59-116 (157)
53 1uij_A Beta subunit of beta co 98.3 1.7E-06 5.8E-11 81.9 8.8 76 73-159 50-126 (416)
54 2ea7_A 7S globulin-1; beta bar 98.3 2.2E-06 7.4E-11 81.7 9.3 76 73-159 62-138 (434)
55 2d5f_A Glycinin A3B4 subunit; 98.3 3.1E-06 1E-10 82.1 10.3 65 94-159 379-445 (493)
56 1fxz_A Glycinin G1; proglycini 98.3 4.2E-06 1.4E-10 80.8 11.0 65 94-159 350-416 (476)
57 1fxz_A Glycinin G1; proglycini 98.3 1.7E-06 5.7E-11 83.6 7.9 79 70-159 47-147 (476)
58 2xlg_A SLL1785 protein, CUCA; 98.2 6.7E-07 2.3E-11 79.1 4.6 61 95-155 56-132 (239)
59 3c3v_A Arachin ARAH3 isoform; 98.2 4.7E-06 1.6E-10 81.4 10.7 65 94-159 384-450 (510)
60 3bcw_A Uncharacterized protein 98.2 9E-07 3.1E-11 70.7 4.4 65 70-149 47-111 (123)
61 2d5f_A Glycinin A3B4 subunit; 98.2 2.9E-06 1E-10 82.2 8.8 78 69-159 43-147 (493)
62 3qac_A 11S globulin SEED stora 98.2 2.8E-06 9.5E-11 82.1 8.4 79 70-159 49-164 (465)
63 2e9q_A 11S globulin subunit be 98.2 2E-06 7E-11 82.7 7.4 79 70-159 62-161 (459)
64 1y3t_A Hypothetical protein YX 98.2 3.6E-06 1.2E-10 74.3 8.4 60 94-159 58-118 (337)
65 1juh_A Quercetin 2,3-dioxygena 98.2 3E-06 1E-10 77.8 8.1 55 97-151 65-120 (350)
66 4e2q_A Ureidoglycine aminohydr 98.2 3.7E-06 1.3E-10 75.9 8.1 67 75-156 189-256 (266)
67 3nw4_A Gentisate 1,2-dioxygena 98.2 1.3E-06 4.6E-11 82.1 5.3 57 95-156 116-173 (368)
68 1y3t_A Hypothetical protein YX 98.2 3.9E-06 1.3E-10 74.1 8.0 59 95-159 231-290 (337)
69 4axo_A EUTQ, ethanolamine util 98.2 2.5E-06 8.5E-11 71.2 6.1 48 95-148 78-125 (151)
70 3c3v_A Arachin ARAH3 isoform; 98.2 3.6E-06 1.2E-10 82.1 8.2 80 69-159 46-160 (510)
71 3bu7_A Gentisate 1,2-dioxygena 98.2 4.6E-06 1.6E-10 78.9 8.7 58 95-156 136-194 (394)
72 2phl_A Phaseolin; plant SEED s 98.2 5.6E-06 1.9E-10 78.3 9.2 76 73-159 53-135 (397)
73 2d40_A Z3393, putative gentisa 98.2 2.4E-06 8.1E-11 78.8 6.5 59 95-158 113-172 (354)
74 1rc6_A Hypothetical protein YL 98.1 4.6E-06 1.6E-10 72.7 7.8 57 95-156 192-250 (261)
75 2pyt_A Ethanolamine utilizatio 98.1 2.3E-06 7.8E-11 68.9 4.8 47 96-148 70-116 (133)
76 1sfn_A Conserved hypothetical 98.1 1.5E-05 5.1E-10 69.4 9.7 69 74-156 167-235 (246)
77 3fz3_A Prunin; TREE NUT allerg 98.1 1.5E-05 5.2E-10 78.3 10.5 66 93-159 405-472 (531)
78 3h7j_A Bacilysin biosynthesis 98.1 4.8E-06 1.7E-10 72.0 6.2 56 94-154 46-102 (243)
79 3bu7_A Gentisate 1,2-dioxygena 98.1 4.8E-06 1.6E-10 78.8 6.7 59 95-158 307-366 (394)
80 2arc_A ARAC, arabinose operon 98.0 9.3E-06 3.2E-10 63.5 6.9 49 96-149 32-80 (164)
81 2vpv_A Protein MIF2, MIF2P; nu 98.0 1.9E-05 6.7E-10 66.7 8.7 52 97-153 105-156 (166)
82 1juh_A Quercetin 2,3-dioxygena 98.0 8.4E-06 2.9E-10 74.8 6.9 53 94-150 264-316 (350)
83 3ksc_A LEGA class, prolegumin; 98.0 1.3E-05 4.3E-10 78.2 8.3 80 69-159 44-144 (496)
84 1sq4_A GLXB, glyoxylate-induce 98.0 9.5E-06 3.3E-10 72.3 6.8 54 96-154 84-137 (278)
85 3es1_A Cupin 2, conserved barr 98.0 1.9E-05 6.7E-10 66.9 7.7 71 74-159 81-151 (172)
86 1sq4_A GLXB, glyoxylate-induce 97.9 2.3E-05 7.8E-10 69.8 8.5 69 74-156 193-261 (278)
87 2phl_A Phaseolin; plant SEED s 97.9 5.3E-05 1.8E-09 71.7 10.4 65 93-159 250-322 (397)
88 1uij_A Beta subunit of beta co 97.9 5.2E-05 1.8E-09 71.7 10.3 65 93-159 260-339 (416)
89 3ksc_A LEGA class, prolegumin; 97.9 0.0001 3.6E-09 71.7 11.9 82 77-159 343-436 (496)
90 2e9q_A 11S globulin subunit be 97.8 5.8E-05 2E-09 72.6 10.0 83 76-159 306-400 (459)
91 3kgl_A Cruciferin; 11S SEED gl 97.8 6.5E-05 2.2E-09 72.6 10.2 83 76-159 307-401 (466)
92 3s7i_A Allergen ARA H 1, clone 97.8 5.5E-05 1.9E-09 72.0 8.9 75 69-156 42-118 (418)
93 3lag_A Uncharacterized protein 97.8 1.4E-05 4.9E-10 60.7 3.9 71 76-158 21-92 (98)
94 3s7i_A Allergen ARA H 1, clone 97.8 6.7E-05 2.3E-09 71.4 9.1 64 94-159 275-364 (418)
95 2q1z_B Anti-sigma factor CHRR, 97.8 8.4E-05 2.9E-09 63.2 8.6 62 75-155 128-189 (195)
96 2d40_A Z3393, putative gentisa 97.7 2.2E-05 7.5E-10 72.4 5.0 57 96-159 282-338 (354)
97 3qac_A 11S globulin SEED stora 97.7 0.00013 4.6E-09 70.5 10.3 83 76-159 307-401 (465)
98 2ozi_A Hypothetical protein RP 97.7 2.5E-05 8.5E-10 59.8 4.0 62 95-158 30-92 (98)
99 2ea7_A 7S globulin-1; beta bar 97.7 0.00012 4.1E-09 69.8 9.0 65 93-159 277-355 (434)
100 3kgl_A Cruciferin; 11S SEED gl 97.7 9.7E-05 3.3E-09 71.5 8.4 78 70-159 42-179 (466)
101 2o1q_A Putative acetyl/propion 97.6 3E-05 1E-09 62.9 3.1 72 74-159 46-117 (145)
102 1rc6_A Hypothetical protein YL 97.6 0.0001 3.5E-09 64.1 6.3 52 100-156 79-130 (261)
103 2cav_A Protein (canavalin); vi 97.5 0.00034 1.2E-08 66.9 9.9 65 93-159 292-368 (445)
104 3nw4_A Gentisate 1,2-dioxygena 97.5 9.3E-05 3.2E-09 69.6 5.8 51 95-150 292-342 (368)
105 1sef_A Conserved hypothetical 97.5 0.00017 5.9E-09 63.4 6.3 50 100-154 82-131 (274)
106 3gbg_A TCP pilus virulence reg 97.4 0.00023 7.8E-09 61.0 6.6 63 75-148 10-72 (276)
107 3es4_A Uncharacterized protein 97.4 0.00025 8.6E-09 56.9 6.3 52 95-150 54-105 (116)
108 4e2q_A Ureidoglycine aminohydr 97.4 0.00025 8.7E-09 63.9 6.4 70 75-158 73-142 (266)
109 2y0o_A Probable D-lyxose ketol 97.3 0.00033 1.1E-08 59.9 6.4 58 94-151 65-145 (175)
110 3ebr_A Uncharacterized RMLC-li 97.3 0.00036 1.2E-08 58.0 6.1 68 72-156 42-111 (159)
111 3fz3_A Prunin; TREE NUT allerg 97.1 0.00088 3E-08 65.9 8.0 33 127-159 174-206 (531)
112 3myx_A Uncharacterized protein 97.1 0.0013 4.5E-08 58.5 8.0 53 100-157 63-115 (238)
113 1sfn_A Conserved hypothetical 97.0 0.0008 2.8E-08 58.4 5.9 57 75-148 53-109 (246)
114 3st7_A Capsular polysaccharide 97.0 0.0016 5.6E-08 57.7 7.6 61 95-156 285-350 (369)
115 3o14_A Anti-ecfsigma factor, C 96.9 0.0015 5.2E-08 57.0 6.5 62 75-156 46-107 (223)
116 3cjx_A Protein of unknown func 96.9 0.0012 4.2E-08 55.2 5.5 60 74-149 45-104 (165)
117 3bal_A Acetylacetone-cleaving 96.5 0.0019 6.4E-08 54.1 4.2 69 68-150 43-111 (153)
118 3myx_A Uncharacterized protein 95.8 0.0085 2.9E-07 53.2 4.9 46 100-149 184-229 (238)
119 2pa7_A DTDP-6-deoxy-3,4-keto-h 95.3 0.046 1.6E-06 44.8 7.3 56 95-151 48-105 (141)
120 3o14_A Anti-ecfsigma factor, C 94.0 0.041 1.4E-06 47.9 4.1 57 74-150 148-204 (223)
121 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 93.9 0.11 3.8E-06 44.9 6.5 57 95-151 73-135 (197)
122 3kmh_A D-lyxose isomerase; cup 93.8 0.074 2.5E-06 47.8 5.3 58 93-150 117-197 (246)
123 1dzr_A DTDP-4-dehydrorhamnose 93.5 0.16 5.5E-06 43.2 6.7 55 96-151 61-128 (183)
124 3bb6_A Uncharacterized protein 93.3 0.59 2E-05 38.1 9.5 70 90-159 22-99 (127)
125 3ejk_A DTDP sugar isomerase; Y 92.9 0.45 1.5E-05 40.2 8.5 55 96-150 67-131 (174)
126 2ixk_A DTDP-4-dehydrorhamnose 92.7 0.23 8E-06 42.2 6.6 56 96-151 63-129 (184)
127 1yud_A Hypothetical protein SO 92.7 0.18 6.3E-06 42.8 5.9 71 68-148 45-122 (170)
128 3ryk_A DTDP-4-dehydrorhamnose 92.7 0.26 8.9E-06 42.8 6.9 56 96-151 84-151 (205)
129 1eyb_A Homogentisate 1,2-dioxy 92.5 0.16 5.4E-06 49.4 5.8 44 101-149 177-220 (471)
130 2c0z_A NOVW; isomerase, epimer 92.0 0.32 1.1E-05 42.6 6.7 56 96-151 69-136 (216)
131 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 91.7 0.61 2.1E-05 39.6 7.9 56 96-151 62-128 (185)
132 1oi6_A PCZA361.16; epimerase, 91.7 0.34 1.2E-05 42.0 6.5 56 96-151 61-128 (205)
133 4gjz_A Lysine-specific demethy 91.7 0.25 8.4E-06 40.6 5.4 57 101-159 143-233 (235)
134 3d8c_A Hypoxia-inducible facto 91.6 1.3 4.4E-05 40.4 10.6 63 97-159 198-296 (349)
135 2gm6_A Cysteine dioxygenase ty 90.8 1.7 5.9E-05 37.2 10.0 67 93-159 90-165 (208)
136 1upi_A DTDP-4-dehydrorhamnose 90.6 0.57 1.9E-05 41.3 6.9 56 96-151 80-147 (225)
137 3eqe_A Putative cystein deoxyg 90.1 2.2 7.5E-05 35.7 9.8 76 74-159 71-151 (171)
138 2vec_A YHAK, pirin-like protei 89.9 1.1 3.6E-05 39.9 8.1 62 94-159 76-141 (256)
139 2qnk_A 3-hydroxyanthranilate 3 89.6 0.66 2.3E-05 42.5 6.6 50 103-159 227-276 (286)
140 1wlt_A 176AA long hypothetical 88.9 1.2 4.1E-05 38.3 7.5 55 96-151 79-146 (196)
141 2qjv_A Uncharacterized IOLB-li 88.8 0.62 2.1E-05 42.1 5.8 73 95-174 168-258 (270)
142 4diq_A Lysine-specific demethy 86.1 5.8 0.0002 38.6 11.2 65 95-159 178-262 (489)
143 2xdv_A MYC-induced nuclear ant 85.8 2.2 7.6E-05 40.6 8.0 55 95-149 153-223 (442)
144 1tq5_A Protein YHHW; bicupin, 84.5 2.7 9.1E-05 36.9 7.4 61 95-159 54-118 (242)
145 1dgw_X Canavalin; duplicated s 81.8 2.5 8.5E-05 31.1 5.2 40 73-122 37-77 (79)
146 1vrb_A Putative asparaginyl hy 81.0 4 0.00014 37.2 7.4 53 96-148 155-241 (342)
147 3al5_A HTYW5, JMJC domain-cont 80.0 4.4 0.00015 36.6 7.3 59 98-158 183-271 (338)
148 4hn1_A Putative 3-epimerase in 78.5 8.6 0.00029 33.2 8.3 56 96-151 58-125 (201)
149 1zx5_A Mannosephosphate isomer 76.9 1 3.5E-05 40.6 2.1 26 124-149 157-182 (300)
150 1qwr_A Mannose-6-phosphate iso 75.1 1.2 4.2E-05 40.4 2.1 24 126-149 159-182 (319)
151 2wfp_A Mannose-6-phosphate iso 70.8 2.1 7.2E-05 40.1 2.7 24 126-149 241-264 (394)
152 3dl3_A Tellurite resistance pr 70.7 11 0.00037 30.2 6.5 67 92-159 26-97 (119)
153 2oyz_A UPF0345 protein VPA0057 68.9 7.9 0.00027 29.9 5.1 45 102-149 41-85 (94)
154 1xru_A 4-deoxy-L-threo-5-hexos 67.1 11 0.00037 34.4 6.4 56 95-152 196-256 (282)
155 2p17_A Pirin-like protein; GK1 66.9 15 0.00051 32.6 7.2 62 94-159 51-115 (277)
156 2pqq_A Putative transcriptiona 64.4 16 0.00056 26.6 6.0 35 102-136 46-81 (149)
157 1ywk_A 4-deoxy-L-threo-5-hexos 64.4 12 0.00042 34.1 6.3 56 95-152 196-256 (289)
158 3k2o_A Bifunctional arginine d 64.0 6.4 0.00022 36.0 4.4 27 124-150 255-281 (336)
159 3pua_A GRC5, PHD finger protei 63.2 4 0.00014 38.7 2.9 27 122-148 241-267 (392)
160 2rg4_A Uncharacterized protein 62.6 8 0.00027 32.9 4.5 63 92-154 113-200 (216)
161 2qdr_A Uncharacterized protein 62.2 4.6 0.00016 37.1 3.0 49 97-156 106-157 (303)
162 3pur_A Lysine-specific demethy 61.5 4.6 0.00016 39.8 3.0 26 122-147 363-388 (528)
163 1dgw_Y Canavalin; duplicated s 60.9 6.2 0.00021 30.2 3.1 33 125-159 6-38 (93)
164 3k3o_A PHF8, PHD finger protei 60.5 4.8 0.00016 37.8 2.9 27 122-148 214-240 (371)
165 1pmi_A PMI, phosphomannose iso 60.5 4.4 0.00015 38.6 2.7 24 126-149 267-290 (440)
166 3i3q_A Alpha-ketoglutarate-dep 59.2 11 0.00039 32.2 4.9 41 106-146 135-177 (211)
167 2xxz_A Lysine-specific demethy 59.1 4.7 0.00016 37.5 2.5 25 124-148 278-303 (332)
168 3loi_A Putative uncharacterize 58.5 19 0.00066 30.4 6.0 54 94-147 65-126 (172)
169 1xe7_A YML079WP, hypothetical 57.8 20 0.00068 31.1 6.2 54 94-147 92-151 (203)
170 3kv4_A PHD finger protein 8; e 57.7 9.3 0.00032 36.6 4.4 29 122-150 298-326 (447)
171 3kv5_D JMJC domain-containing 57.0 6 0.00021 38.2 3.0 44 105-148 291-359 (488)
172 1qwr_A Mannose-6-phosphate iso 56.8 21 0.00073 32.1 6.5 37 101-142 268-304 (319)
173 3dn7_A Cyclic nucleotide bindi 56.6 22 0.00074 27.6 5.8 57 102-158 48-109 (194)
174 3eln_A Cysteine dioxygenase ty 56.5 89 0.0031 26.3 10.3 66 94-159 82-157 (200)
175 3mdp_A Cyclic nucleotide-bindi 54.8 18 0.00062 26.2 4.8 63 59-136 19-85 (142)
176 2fmy_A COOA, carbon monoxide o 53.8 52 0.0018 26.0 7.7 52 102-158 45-97 (220)
177 3eo6_A Protein of unknown func 53.0 15 0.00053 29.0 4.2 43 102-147 54-96 (106)
178 2yu1_A JMJC domain-containing 52.5 12 0.0004 35.9 4.2 28 123-150 264-291 (451)
179 3dv8_A Transcriptional regulat 52.1 43 0.0015 26.3 6.9 62 59-135 16-78 (220)
180 3kv9_A JMJC domain-containing 51.7 8.2 0.00028 36.6 2.9 27 122-148 242-268 (397)
181 3gyd_A CNMP-BD protein, cyclic 51.5 38 0.0013 26.6 6.5 62 59-135 52-114 (187)
182 1j1l_A Pirin; beta sandwich, c 51.0 31 0.0011 30.9 6.5 61 95-159 53-117 (290)
183 3idb_B CAMP-dependent protein 50.9 62 0.0021 24.3 7.4 33 102-135 79-112 (161)
184 3uss_A Putative uncharacterize 50.8 1.2E+02 0.004 26.0 10.8 70 94-166 85-163 (211)
185 3tht_A Alkylated DNA repair pr 50.3 15 0.0005 33.9 4.3 40 106-145 227-266 (345)
186 3b02_A Transcriptional regulat 50.2 36 0.0012 26.5 6.1 35 102-136 17-52 (195)
187 1ft9_A Carbon monoxide oxidati 49.0 62 0.0021 25.6 7.5 34 102-136 41-75 (222)
188 2oz6_A Virulence factor regula 48.9 37 0.0013 26.4 6.0 35 102-136 31-66 (207)
189 3hqx_A UPF0345 protein aciad03 48.6 38 0.0013 26.9 5.9 46 102-150 57-102 (111)
190 3ryp_A Catabolite gene activat 46.5 43 0.0015 26.1 6.0 35 102-136 37-72 (210)
191 2bgc_A PRFA; bacterial infecti 46.3 38 0.0013 27.4 5.8 38 102-139 36-73 (238)
192 3avr_A Lysine-specific demethy 45.8 9.9 0.00034 37.4 2.5 44 124-172 337-380 (531)
193 2qdr_A Uncharacterized protein 45.5 20 0.0007 32.8 4.3 30 99-144 235-264 (303)
194 1zx5_A Mannosephosphate isomer 45.2 21 0.00071 32.0 4.4 50 102-159 247-297 (300)
195 4ev0_A Transcription regulator 44.9 38 0.0013 26.5 5.5 35 102-136 40-75 (216)
196 3opt_A DNA damage-responsive t 44.3 20 0.00069 33.8 4.3 57 124-185 304-360 (373)
197 3fx3_A Cyclic nucleotide-bindi 44.0 44 0.0015 26.7 5.8 62 59-135 24-86 (237)
198 2wfp_A Mannose-6-phosphate iso 43.7 21 0.0007 33.4 4.3 53 99-159 339-391 (394)
199 2lcj_A PAB POLC intein; hydrol 43.3 24 0.00082 28.9 4.2 28 106-140 95-122 (185)
200 4ask_A Lysine-specific demethy 43.1 12 0.0004 36.8 2.5 25 124-148 312-336 (510)
201 3iwz_A CAP-like, catabolite ac 42.4 44 0.0015 26.4 5.5 63 59-136 24-87 (230)
202 3d0s_A Transcriptional regulat 42.2 48 0.0016 26.3 5.8 57 102-158 47-107 (227)
203 3kcc_A Catabolite gene activat 40.5 54 0.0018 27.1 6.0 35 102-136 87-122 (260)
204 2zcw_A TTHA1359, transcription 39.3 44 0.0015 26.1 5.0 35 103-137 26-61 (202)
205 4ava_A Lysine acetyltransferas 38.0 48 0.0016 28.2 5.4 62 59-135 26-87 (333)
206 3dxt_A JMJC domain-containing 37.7 9.6 0.00033 35.7 1.0 52 123-179 260-311 (354)
207 1znp_A Hypothetical protein AT 37.0 55 0.0019 27.2 5.4 69 68-146 36-112 (154)
208 1o5l_A Transcriptional regulat 36.3 53 0.0018 26.0 5.1 34 102-135 40-74 (213)
209 1pmi_A PMI, phosphomannose iso 36.3 64 0.0022 30.6 6.4 56 101-159 378-437 (440)
210 3la7_A Global nitrogen regulat 35.8 62 0.0021 26.3 5.6 34 102-135 61-95 (243)
211 1zyb_A Transcription regulator 35.6 48 0.0016 26.7 4.8 65 59-136 31-96 (232)
212 2z69_A DNR protein; beta barre 35.4 22 0.00075 26.1 2.5 34 102-135 53-87 (154)
213 3e97_A Transcriptional regulat 33.9 81 0.0028 25.0 5.9 62 59-135 19-81 (231)
214 3e6c_C CPRK, cyclic nucleotide 33.6 71 0.0024 25.9 5.6 35 102-136 50-85 (250)
215 1aba_A Glutaredoxin; electron 33.4 60 0.002 22.4 4.5 53 39-91 22-83 (87)
216 2lqo_A Putative glutaredoxin R 32.8 81 0.0028 23.0 5.3 42 39-82 22-64 (92)
217 3pna_A CAMP-dependent protein 32.6 78 0.0027 23.5 5.3 30 102-135 79-108 (154)
218 2ptm_A Hyperpolarization-activ 32.4 58 0.002 25.5 4.7 31 102-135 112-142 (198)
219 3s57_A Alpha-ketoglutarate-dep 32.2 27 0.00091 29.4 2.8 39 106-144 132-179 (204)
220 2ypd_A Probable JMJC domain-co 31.5 29 0.00098 33.0 3.1 29 125-154 293-321 (392)
221 2gau_A Transcriptional regulat 30.4 50 0.0017 26.3 4.1 62 59-135 23-85 (232)
222 2qcs_B CAMP-dependent protein 30.2 1E+02 0.0035 25.3 6.1 34 102-135 198-233 (291)
223 2cw8_A Endonuclease PI-pkoii; 30.1 43 0.0015 32.1 4.2 16 129-144 114-129 (537)
224 2d93_A RAP guanine nucleotide 29.5 79 0.0027 22.8 4.8 29 103-135 59-87 (134)
225 4dsd_A Putative periplasmic pr 29.4 75 0.0026 25.0 4.8 41 75-118 3-47 (129)
226 3m3i_A Putative uncharacterize 28.2 1.1E+02 0.0036 27.1 6.0 67 69-145 57-158 (225)
227 4f8a_A Potassium voltage-gated 26.4 1.2E+02 0.0042 22.1 5.4 60 59-137 40-99 (160)
228 2jmz_A Hypothetical protein MJ 26.2 31 0.0011 28.2 2.1 29 106-141 105-133 (186)
229 3shr_A CGMP-dependent protein 25.4 1.2E+02 0.004 25.2 5.6 33 103-135 199-233 (299)
230 3h8q_A Thioredoxin reductase 3 24.4 73 0.0025 23.4 3.8 53 39-91 35-88 (114)
231 2iuw_A Alkylated repair protei 23.9 84 0.0029 26.9 4.5 38 107-144 159-206 (238)
232 3bpz_A Potassium/sodium hyperp 23.3 73 0.0025 25.0 3.8 30 102-135 113-142 (202)
233 2lok_A Uncharacterized protein 22.2 3.1E+02 0.01 23.5 7.7 80 31-138 33-116 (197)
234 2ox0_A JMJC domain-containing 20.9 24 0.00083 33.2 0.5 48 123-175 278-325 (381)
235 3g7d_A PHPD; non heme Fe(II) d 20.7 2.3E+02 0.0077 27.0 6.9 52 105-159 357-408 (443)
236 2qjv_A Uncharacterized IOLB-li 20.5 4.1E+02 0.014 23.6 8.5 70 68-150 25-102 (270)
237 3ocp_A PRKG1 protein; serine/t 20.3 1.6E+02 0.0053 21.3 4.8 30 102-135 64-93 (139)
No 1
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=100.00 E-value=3.9e-53 Score=367.33 Aligned_cols=178 Identities=56% Similarity=0.962 Sum_probs=169.7
Q ss_pred hheeeEEecCCCCCCCCCCCCCCCCcCCHhHHhhcCeEEEEeCCCCcCChHHHHHHHHhcCCCeeeEEEECCCCCCChHH
Q 025650 10 EVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEE 89 (250)
Q Consensus 10 ~mv~aw~~d~~~~d~rl~h~~~p~~~vs~~~L~~lGV~~~~~~~~~~e~~~~l~~L~~erGY~~~Dvi~l~p~~~Pn~e~ 89 (250)
-||||||||++++|||+||+++|++.||+++|+++||+||+++++.++.+.+|++|++++||.+.|+++++|+++||+++
T Consensus 12 ~~~~~~~~~~~~~d~~~ph~~~~~~~v~~~~L~~~GV~~w~~~~~~~~~~~~l~~l~~~~gy~~~D~v~~~p~~~p~~~~ 91 (191)
T 1vr3_A 12 HMVQAWYMDESTADPRKPHRAQPDRPVSLEQLRTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNYEE 91 (191)
T ss_dssp -CCEEEEBCSCCSCTTSCCBCSSCCBCCHHHHHHTTCEEEECCGGGTTSCHHHHHHHHHHTCCEEEEEEESTTTSTTHHH
T ss_pred hhheeeeccCCccccCcccccCCCCccCHHHHHhcCcEEEECCCccccccHHHHHHHHhcCCCceeEEEECCCcCcchhh
Confidence 39999999999999999999999999999999999999999998777778999999999999999999999997799999
Q ss_pred HHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEeeecCCCcccee
Q 025650 90 KIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFGLHSTVPMIIY 169 (250)
Q Consensus 90 kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF~~~~~P~GWv 169 (250)
|+++||.||+|+++|++||++|+|+|.+++.+|+|+++.+++||+|+||+|++|||++++++++++||+| ..+|+ |+
T Consensus 92 k~~~~~~~H~H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF--~~~~~-W~ 168 (191)
T 1vr3_A 92 KIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLF--VGEPV-WT 168 (191)
T ss_dssp HHHHHHSCEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTCCEEEEEEE--SSSCC-CC
T ss_pred hhccCCcceECCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCCCEEEEEEE--CCCCC-cc
Confidence 9999999999999999999999999999987788999999999999999999999999999999999999 66666 99
Q ss_pred ecCCCCcchHHHHHHHHHHHH
Q 025650 170 PQGRDMFKISCRRKLVTALSM 190 (250)
Q Consensus 170 ~~~R~~D~~~~R~~yl~~l~~ 190 (250)
|+|||+|++++|++||++|..
T Consensus 169 ~~~r~~~~~~~r~~y~~~~~~ 189 (191)
T 1vr3_A 169 PYNRPADHFDARVQYMSFLEG 189 (191)
T ss_dssp CEESCCTTSHHHHHHHHHHHH
T ss_pred CCCCchhccHHHHHHHHHhhh
Confidence 999999999999999999864
No 2
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=100.00 E-value=3.4e-36 Score=257.87 Aligned_cols=159 Identities=23% Similarity=0.338 Sum_probs=136.7
Q ss_pred ecCCCCCCCCCCCCCCCCcCCHhHHhhcCeEEEEeCCC-----CcC-------ChHHHHHHHHhcCCCeeeEEEECCCCC
Q 025650 17 MDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDAD-----NYE-------TDEELKKIREDRGYSYMDFCEVCPEKL 84 (250)
Q Consensus 17 ~d~~~~d~rl~h~~~p~~~vs~~~L~~lGV~~~~~~~~-----~~e-------~~~~l~~L~~erGY~~~Dvi~l~p~~~ 84 (250)
++++++++++....+++.++ ++|+++||.|++++++ .++ ++++|++|++++||.++|++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~--~~L~~~gV~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~l~~~~gy~~~D~i~~~~~~- 82 (179)
T 1zrr_A 6 FSVKDPQNSLWHSTNAEEIQ--QQLNAKGVRFERWQADRDLGAAPTAETVIAAYQHAIDKLVAEKGYQSWDVISLRADN- 82 (179)
T ss_dssp ECSSCSSCEEEEECCSHHHH--HHHHHTTCCCCCCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHCCSEEEEECCCTTC-
T ss_pred ecCCCcCCcceeeCCHHHHH--HHHHHcCcEEEEcCCCCccCCcccHHHHHHHHHHHHHHHHHHhCCCcccEEEEcCCC-
Confidence 34555566666677787777 9999999999777663 111 24679999999999999999999985
Q ss_pred CChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEeeecCCC
Q 025650 85 PNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFGLHSTV 164 (250)
Q Consensus 85 Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF~~~~~ 164 (250)
|++++|+++||.||.|+++|++||++|+|+|.++ .+|+|+++.+++||+|+||+|++|||+.++++++++||+| .+.
T Consensus 83 p~~~~~~~~~~~~H~H~~~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F--~~~ 159 (179)
T 1zrr_A 83 PQKEALREKFLNEHTHGEDEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIF--DNP 159 (179)
T ss_dssp THHHHHHHHHHSCBEESSCEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEE--CCG
T ss_pred CChhHhhcccccceECChheEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEec--cCC
Confidence 9999999999999999999999999999999998 6789999999999999999999999999999999999999 555
Q ss_pred ccceeecCCCCcchHHHHH
Q 025650 165 PMIIYPQGRDMFKISCRRK 183 (250)
Q Consensus 165 P~GWv~~~R~~D~~~~R~~ 183 (250)
| ||++++| +++++.|++
T Consensus 160 ~-~w~~~~~-g~~ia~~~p 176 (179)
T 1zrr_A 160 E-GWIAQFT-GDDIASAYP 176 (179)
T ss_dssp G-GEESCSS-CCCSGGGSC
T ss_pred C-CccccCC-CchhHhhCC
Confidence 5 5999888 566776653
No 3
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.92 E-value=4.1e-09 Score=81.00 Aligned_cols=82 Identities=11% Similarity=0.107 Sum_probs=60.8
Q ss_pred eeeEEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCC
Q 025650 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDN 151 (250)
Q Consensus 73 ~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~ 151 (250)
..-.+++.|+. ...+|.|.. +|++||++|++.+.+. +++. +.+++||++.+|+|+.|++....+.
T Consensus 40 ~~~~~~~~pg~----------~~~~H~H~~~~e~~~Vl~G~~~~~~~--~~~~--~~l~~Gd~~~i~~~~~H~~~n~~~~ 105 (125)
T 3h8u_A 40 VVVVWHAHPGQ----------EIASHVHPHGQDTWTVISGEAEYHQG--NGIV--THLKAGDIAIAKPGQVHGAMNSGPE 105 (125)
T ss_dssp EEEEEEECTTC----------EECCC-CTTCEEEEEEEECEEEEECS--TTCE--EEEETTEEEEECTTCCCEEEECSSS
T ss_pred EEEEEEECCCC----------cCCcccCCCCeEEEEEEEeEEEEEEC--CCeE--EEeCCCCEEEECCCCEEEeEeCCCC
Confidence 34456777664 457999995 8999999999999773 3443 6799999999999999999987666
Q ss_pred cEEEEEeeecCCCccceee
Q 025650 152 YIKVIPFGLHSTVPMIIYP 170 (250)
Q Consensus 152 ~vkA~RlF~~~~~P~GWv~ 170 (250)
.+..+-++ ...+.+|.+
T Consensus 106 ~~~~l~v~--~p~~~~~~~ 122 (125)
T 3h8u_A 106 PFIFVSVV--APGNAGFAL 122 (125)
T ss_dssp CEEEEEEE--ESTTCCCCC
T ss_pred CEEEEEEE--CCCcccchh
Confidence 67777676 333344544
No 4
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.84 E-value=8.6e-09 Score=88.53 Aligned_cols=56 Identities=21% Similarity=0.270 Sum_probs=49.1
Q ss_pred ccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCC
Q 025650 93 NFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 93 ~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
..|.||.|+.||+||+++|+....++|. ++.-.+.+++||+++||+|++|+....+
T Consensus 46 ~r~d~H~h~~dE~FyvlkG~m~i~v~d~-g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 46 HRTDYHDDPLEEFFYQLRGNAYLNLWVD-GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp CCCCEEECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cCccCcCCCCceEEEEEeeEEEEEEEcC-CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 5689999999999999999999999963 4455699999999999999999986654
No 5
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=98.81 E-value=9.8e-09 Score=74.59 Aligned_cols=60 Identities=18% Similarity=0.290 Sum_probs=49.4
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~d-dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
..+|.|+. +|+.||++|++.+.+. ++ ...+++||++.+|+|+.|++...++.....+-++
T Consensus 41 ~~~H~H~~~~e~~~v~~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~ 101 (105)
T 1v70_A 41 QKVHVHEGSDKVYYALEGEVVVRVG---EE--EALLAPGMAAFAPAGAPHGVRNESASPALLLVVT 101 (105)
T ss_dssp EEEECCSSCEEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTSCEEEECCSSSCEEEEEEE
T ss_pred CCccCCCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEe
Confidence 46899996 7999999999999884 44 3689999999999999999988665556655554
No 6
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.79 E-value=7.2e-09 Score=86.34 Aligned_cols=65 Identities=17% Similarity=0.295 Sum_probs=52.1
Q ss_pred hccccccccCc-ceEEEEEeceEEEEEEeCCC---eEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 92 KNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE---KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 92 ~~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d---~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
...-..|.|.+ ||+|++++|++..++++.++ +--.+.+++|++++||+|+.|+..+.++. +.| |+
T Consensus 39 ~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e~--~vL-Li 107 (140)
T 3d0j_A 39 EGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKDT--KMM-YV 107 (140)
T ss_dssp TTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTTC--EEE-EE
T ss_pred ccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCce--EEE-EE
Confidence 45567899986 99999999999999996421 02358899999999999999999997654 433 55
No 7
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=98.75 E-value=1.5e-08 Score=77.16 Aligned_cols=61 Identities=8% Similarity=0.078 Sum_probs=49.8
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
..+|.|+.+|+.||++|++.+.+. ++.+ +.+++||++.+|+|+.|++...++..+..+-++
T Consensus 40 ~~~H~H~~~e~~~Vl~G~~~~~i~---~~~~-~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~ 100 (117)
T 2b8m_A 40 MPKHYSNSYVHLIIIKGEMTLTLE---DQEP-HNYKEGNIVYVPFNVKMLIQNINSDILEFFVVK 100 (117)
T ss_dssp CCCEECSSCEEEEEEESEEEEEET---TSCC-EEEETTCEEEECTTCEEEEECCSSSEEEEEEEE
T ss_pred CCCEeCCCcEEEEEEeCEEEEEEC---CEEE-EEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEE
Confidence 458999999999999999999885 3321 279999999999999999998766656666563
No 8
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=98.74 E-value=2.4e-08 Score=77.22 Aligned_cols=61 Identities=18% Similarity=0.198 Sum_probs=50.6
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 94 F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
...+|.|..+|+.||++|++.+.+. ++ ...+++||.|.+|+|+.|++...++..+..+-+|
T Consensus 48 ~~~~H~H~~~e~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v~ 108 (114)
T 3fjs_A 48 QVGSHSVAGPSTIQCLEGEVEIGVD---GA--QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVVL 108 (114)
T ss_dssp EEEEECCSSCEEEEEEESCEEEEET---TE--EEEECTTEEEEECTTCCEEEEESSSEEEEEEEEC
T ss_pred ccCceeCCCcEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEeCCCcEEEEEEEe
Confidence 4578999999999999999999884 44 3679999999999999999998776555554444
No 9
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=98.72 E-value=4.2e-08 Score=82.79 Aligned_cols=65 Identities=17% Similarity=0.198 Sum_probs=54.6
Q ss_pred ccccccCc---ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 95 FEEHLHTD---EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~d---dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
...|.|.. +|++||++|++.+.+.+..++++.+.+++||+|.+|+|+.|++....+..++.+-++
T Consensus 86 ~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~ 153 (190)
T 1x82_A 86 TKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIY 153 (190)
T ss_dssp CCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred CCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEE
Confidence 34688863 799999999999999977678888999999999999999999987666566655455
No 10
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=98.71 E-value=7.5e-08 Score=81.50 Aligned_cols=80 Identities=19% Similarity=0.163 Sum_probs=63.0
Q ss_pred cCCCeeeEEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEeCC---CeEEEEEEecCCEEEeCCCCccc
Q 025650 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRN---EKWIRIWVKKGGMIVLPAGCYHR 144 (250)
Q Consensus 69 rGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~---d~wirI~~e~GDLI~VPAG~~Hr 144 (250)
.|+ ..-.+.+.|+. ...+|.|+. +|+.||++|++.+.+.+.+ ++.+...+++||++++|+|+.|+
T Consensus 70 ~~~-~~~~~~l~pg~----------~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~ 138 (201)
T 1fi2_A 70 LGV-SMNRVDFAPGG----------TNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHF 138 (201)
T ss_dssp SSC-EEEEEEECTTC----------EEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEE
T ss_pred Cce-EEEEEEECCCC----------CCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEE
Confidence 344 33456777664 356999996 7999999999999997554 67667889999999999999999
Q ss_pred cccCCCCcEEEEEee
Q 025650 145 FTLDTDNYIKVIPFG 159 (250)
Q Consensus 145 F~l~~~~~vkA~RlF 159 (250)
+....+..+.++-+|
T Consensus 139 ~~N~g~~~~~~l~v~ 153 (201)
T 1fi2_A 139 QFNVGKTEAYMVVSF 153 (201)
T ss_dssp EEECSSSCEEEEEEE
T ss_pred EEeCCCCCEEEEEEE
Confidence 987555567766666
No 11
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.70 E-value=1.4e-08 Score=74.42 Aligned_cols=51 Identities=27% Similarity=0.420 Sum_probs=44.3
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCC
Q 025650 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 94 F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
.+.+|.|+. +|+.||++|++.+.+. ++ ...+++||++.+|+|+.|++...+
T Consensus 41 ~~~~H~H~~~~e~~~v~~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~ 92 (102)
T 3d82_A 41 EFVWHEHADTDEVFIVMEGTLQIAFR---DQ--NITLQAGEMYVIPKGVEHKPMAKE 92 (102)
T ss_dssp ECCCBCCTTCCEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTCCBEEEEEE
T ss_pred CCCceeCCCCcEEEEEEeCEEEEEEC---CE--EEEEcCCCEEEECCCCeEeeEcCC
Confidence 367999998 9999999999999885 33 367999999999999999998763
No 12
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=98.70 E-value=4.4e-08 Score=75.09 Aligned_cols=71 Identities=18% Similarity=0.259 Sum_probs=55.8
Q ss_pred eeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCc
Q 025650 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (250)
Q Consensus 73 ~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~ 152 (250)
..-.+++.|+. ...+|.|+.+|+.||++|++.+.+. ++ ...+++||.+.+|+|+.|++...++ .
T Consensus 42 ~~~~~~~~pg~----------~~~~H~H~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~ 105 (126)
T 4e2g_A 42 MLNWVRIEPNT----------EMPAHEHPHEQAGVMLEGTLELTIG---EE--TRVLRPGMAYTIPGGVRHRARTFED-G 105 (126)
T ss_dssp EEEEEEECTTC----------EEEEECCSSEEEEEEEEECEEEEET---TE--EEEECTTEEEEECTTCCEEEECCTT-C
T ss_pred EEEEEEECCCC----------cCCCccCCCceEEEEEEeEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEECCC-C
Confidence 33556677664 3468999999999999999999884 44 3679999999999999999998765 4
Q ss_pred EEEEEee
Q 025650 153 IKVIPFG 159 (250)
Q Consensus 153 vkA~RlF 159 (250)
...+-+|
T Consensus 106 ~~~l~v~ 112 (126)
T 4e2g_A 106 CLVLDIF 112 (126)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5555555
No 13
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=98.68 E-value=3.5e-08 Score=74.32 Aligned_cols=61 Identities=16% Similarity=0.209 Sum_probs=50.2
Q ss_pred eEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCC
Q 025650 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (250)
Q Consensus 75 Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~ 150 (250)
-.+++.|+. .+.+|.|+.+|+.||++|++.+.+. |+. ..+++||++.+|+|+.|++...++
T Consensus 43 ~~~~~~~g~----------~~~~H~H~~~e~~~vl~G~~~~~~~---~~~--~~l~~Gd~~~ip~~~~H~~~~~~~ 103 (115)
T 1yhf_A 43 TVFSLDKGQ----------EIGRHSSPGDAMVTILSGLAEITID---QET--YRVAEGQTIVMPAGIPHALYAVEA 103 (115)
T ss_dssp EEEEECTTC----------EEEEECCSSEEEEEEEESEEEEEET---TEE--EEEETTCEEEECTTSCEEEEESSC
T ss_pred EEEEECCCC----------ccCCEECCCcEEEEEEeCEEEEEEC---CEE--EEECCCCEEEECCCCCEEEEECCC
Confidence 455666653 3568999999999999999999884 443 679999999999999999998764
No 14
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=98.68 E-value=3e-08 Score=77.20 Aligned_cols=78 Identities=22% Similarity=0.267 Sum_probs=55.5
Q ss_pred cCCCeeeEEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCcccccc
Q 025650 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 147 (250)
Q Consensus 69 rGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l 147 (250)
.|....-++.+... | ...+.+|.|.. +|+.||++|++.+.+.+ ++ .+.+++||++.+|+|+.|++..
T Consensus 38 ~g~~~~~~~~~~~~--~------g~~~~~H~H~~~~E~~~vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~g~~H~~~~ 105 (134)
T 2o8q_A 38 GGMFGAHVIRAIPG--K------EAKPTWHTHTVGFQLFYVLRGWVEFEYED--IG--AVMLEAGGSAFQPPGVRHRELR 105 (134)
T ss_dssp TTSCEEEEEEECC-------------CCCEEECCSCEEEEEEESEEEEEETT--TE--EEEEETTCEEECCTTCCEEEEE
T ss_pred CCceEEEEEEEecC--C------CCCCCCEECCCCcEEEEEEeCEEEEEECC--cE--EEEecCCCEEEECCCCcEEeEe
Confidence 45444467777632 2 12347999998 99999999999998852 14 3679999999999999999988
Q ss_pred CCCCcEEEEEee
Q 025650 148 DTDNYIKVIPFG 159 (250)
Q Consensus 148 ~~~~~vkA~RlF 159 (250)
.++. .+.+-++
T Consensus 106 ~~~~-~~~l~~~ 116 (134)
T 2o8q_A 106 HSDD-LEVLEIV 116 (134)
T ss_dssp ECTT-CEEEEEE
T ss_pred CCCC-eEEEEEE
Confidence 4443 3444344
No 15
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=98.68 E-value=4.7e-08 Score=75.13 Aligned_cols=60 Identities=17% Similarity=0.302 Sum_probs=49.0
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEe
Q 025650 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPF 158 (250)
Q Consensus 94 F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~Rl 158 (250)
....|.|+..|+.||++|++.+.+. ++ ...+++||++.+|+|+.|++...++..+..+-+
T Consensus 46 ~~~~H~H~~~Ei~~v~~G~~~~~i~---~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i 105 (128)
T 4i4a_A 46 KSFRHSHNEYELFIVIQGNAIIRIN---DE--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI 105 (128)
T ss_dssp ECCCBCCSSEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred ccCCEecCCeEEEEEEeCEEEEEEC---CE--EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 3568999999999999999999984 44 367999999999999999998765554554433
No 16
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=98.67 E-value=3.6e-08 Score=73.08 Aligned_cols=60 Identities=20% Similarity=0.233 Sum_probs=49.1
Q ss_pred cccc--ccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 95 FEEH--LHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH--~H~-ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
..+| .|. .+|+.||++|++.+.+. ++. ..+++||++.+|+|+.|++...++..+..+-++
T Consensus 34 ~~~h~~~H~~~~e~~~vl~G~~~~~~~---~~~--~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~ 96 (113)
T 2gu9_A 34 EGGPDNRHRGADQWLFVVDGAGEAIVD---GHT--QALQAGSLIAIERGQAHEIRNTGDTPLKTVNFY 96 (113)
T ss_dssp EECCCSSSCCCEEEEEEEECCEEEEET---TEE--EEECTTEEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred cCCcccccCCCcEEEEEEeCEEEEEEC---CEE--EEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEE
Confidence 4567 998 79999999999999884 443 679999999999999999988665556655555
No 17
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.66 E-value=5.2e-08 Score=86.16 Aligned_cols=67 Identities=25% Similarity=0.268 Sum_probs=55.6
Q ss_pred ccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEeeecCCCcc
Q 025650 93 NFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFGLHSTVPM 166 (250)
Q Consensus 93 ~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF~~~~~P~ 166 (250)
..|.+|.|..||++|||+|++.|.+. +++| ..+++||.|.+|+|+.|+.++++++ +.++=.+ .+.|-
T Consensus 143 ~~yP~HsHp~EEiy~VLsG~~e~~v~--~g~~--~~l~pGd~v~ipsgv~Ha~rt~deP-llalwvW--~G~~~ 209 (217)
T 4b29_A 143 LDYGWHEHLPEELYSVVSGRALFHLR--NAPD--LMLEPGQTRFHPANAPHAMTTLTDP-ILTLVLW--RGAGL 209 (217)
T ss_dssp CEEEEEECSSEEEEEEEEECEEEEET--TSCC--EEECTTCEEEECTTCCEEEECCSSC-EEEEEEE--ESTTT
T ss_pred CcCCCCCCCCceEEEEEeCCEEEEEC--CCCE--EecCCCCEEEcCCCCceeEEECCcc-EEEEEEE--eCCCC
Confidence 35999999999999999999999985 4566 5799999999999999999976654 6656566 56654
No 18
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=98.66 E-value=1.6e-07 Score=75.14 Aligned_cols=65 Identities=17% Similarity=0.274 Sum_probs=52.2
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~d-dEIr~IleGsG~Fdvrd~~d-~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
..+|.|.. +|+.||++|++.+.+.+..+ .+++..+++||+|.+|+|+.|++....+..+..+-++
T Consensus 56 ~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i~ 122 (148)
T 2oa2_A 56 IGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSIY 122 (148)
T ss_dssp CCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred cCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEEE
Confidence 46899985 79999999999999985432 2456789999999999999999997665556655555
No 19
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.63 E-value=1.8e-08 Score=75.82 Aligned_cols=50 Identities=24% Similarity=0.417 Sum_probs=41.6
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccC
Q 025650 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (250)
Q Consensus 95 ~~EH~H~d-dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~ 148 (250)
+.+|.|+. +|+.||++|++.+.+.+ ++ ...+++||.+.+|+|+.|++...
T Consensus 40 ~~~H~H~~~~E~~~Vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~~~~H~~~~~ 90 (107)
T 2i45_A 40 YGWHTHGYSDKVLFAVEGDMAVDFAD--GG--SMTIREGEMAVVPKSVSHRPRSE 90 (107)
T ss_dssp CCCBCC--CCEEEEESSSCEEEEETT--SC--EEEECTTEEEEECTTCCEEEEEE
T ss_pred CcceeCCCCCEEEEEEeCEEEEEECC--Cc--EEEECCCCEEEECCCCcEeeEeC
Confidence 35899998 99999999999998853 13 36799999999999999999874
No 20
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=98.63 E-value=5.8e-08 Score=73.21 Aligned_cols=58 Identities=19% Similarity=0.117 Sum_probs=47.8
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
..+|.|+.+|+.||++|++.+.+. ++ ...+++||.+.+|+|+.|++...+. ...+-+|
T Consensus 47 ~~~H~H~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~v~ 104 (116)
T 2pfw_A 47 GYVHAHRHSQVSYVVEGEFHVNVD---GV--IKVLTAGDSFFVPPHVDHGAVCPTG--GILIDTF 104 (116)
T ss_dssp EEEECCSSEEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEEESSC--EEEEEEE
T ss_pred CCcEECCcceEEEEEeeEEEEEEC---CE--EEEeCCCCEEEECcCCceeeEeCCC--cEEEEEE
Confidence 568999999999999999999884 44 3679999999999999999988763 3444444
No 21
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=98.63 E-value=3.8e-08 Score=74.61 Aligned_cols=50 Identities=12% Similarity=0.187 Sum_probs=43.8
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCC
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
..+|.|+.+|+.||++|++.+.+. ++ ...+++||.|.+|+|+.|++...+
T Consensus 51 ~~~H~h~~~e~~~vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H~~~~~~ 100 (114)
T 2ozj_A 51 VSEEEYFGDTLYLILQGEAVITFD---DQ--KIDLVPEDVLMVPAHKIHAIAGKG 100 (114)
T ss_dssp CCCBCCSSCEEEEEEEEEEEEEET---TE--EEEECTTCEEEECTTCCBEEEEEE
T ss_pred cccEECCCCeEEEEEeCEEEEEEC---CE--EEEecCCCEEEECCCCcEEEEeCC
Confidence 458999999999999999999884 44 367999999999999999998764
No 22
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=98.63 E-value=1.8e-07 Score=77.42 Aligned_cols=61 Identities=7% Similarity=0.095 Sum_probs=50.1
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCC-CCcEEEEEee
Q 025650 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DNYIKVIPFG 159 (250)
Q Consensus 94 F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~-~~~vkA~RlF 159 (250)
....|.|..+|+.||++|++.+.+. |+ ...+++||+|.+|+|+.|++.... +..+..+-++
T Consensus 68 ~~~~H~H~~~E~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~ 129 (167)
T 3ibm_A 68 YTTLERHEHTHVVMVVRGHAEVVLD---DR--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIV 129 (167)
T ss_dssp BCCCBBCSSCEEEEEEESEEEEEET---TE--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEE
T ss_pred CCCCccCCCcEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEE
Confidence 3568999999999999999999884 44 367999999999999999998765 5556655555
No 23
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=98.61 E-value=1.6e-07 Score=75.95 Aligned_cols=65 Identities=15% Similarity=0.108 Sum_probs=51.5
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCC----CeEEEEEEecCCEEEeCCCCccccccCC-CCcEEEEEee
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRN----EKWIRIWVKKGGMIVLPAGCYHRFTLDT-DNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~----d~wirI~~e~GDLI~VPAG~~HrF~l~~-~~~vkA~RlF 159 (250)
...|.|..+|+.||++|++.+.+.+.+ ++.-++.+++||++.+|+|+.|++.... +..+..+-++
T Consensus 54 ~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~ 123 (163)
T 1lr5_A 54 TPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVII 123 (163)
T ss_dssp CCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEE
T ss_pred CCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEE
Confidence 468999999999999999999997421 1222478999999999999999998766 5556655555
No 24
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=98.61 E-value=1.1e-07 Score=73.93 Aligned_cols=63 Identities=21% Similarity=0.224 Sum_probs=50.6
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 94 F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
...+|.|...|+.||++|++.+.+. .+++ ...+++||.+.+|+|+.|++...++..+..+-++
T Consensus 51 ~~~~H~H~~~e~~~vl~G~~~~~~~-~~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~ 113 (145)
T 3ht1_A 51 STPPHFHEWEHEIYVLEGSMGLVLP-DQGR--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVA 113 (145)
T ss_dssp ECCCEECSSCEEEEEEEECEEEEEG-GGTE--EEEECTTCEEEECTTCCBEEECCTTCCEEEEEEE
T ss_pred cCCCccCCCceEEEEEEeEEEEEEe-ECCE--EEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEE
Confidence 3569999999999999999999821 1344 3679999999999999999998766666666555
No 25
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.60 E-value=1e-07 Score=81.98 Aligned_cols=57 Identities=25% Similarity=0.299 Sum_probs=49.1
Q ss_pred ccccccccCcceEEEEEeceEEEEEEeCC---CeEEEEEEecCCEEEeCCCCccccccCC
Q 025650 93 NFFEEHLHTDEEIRYCVAGSGYFDVRDRN---EKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 93 ~F~~EH~H~ddEIr~IleGsG~Fdvrd~~---d~wirI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
..++||.|+.||.||+++|++...++|.+ ++...|.+++||+++||+|++|+....+
T Consensus 45 ~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~ 104 (176)
T 1zvf_A 45 ERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRFA 104 (176)
T ss_dssp CCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEECT
T ss_pred cCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcccC
Confidence 45889988899999999999999999733 1456799999999999999999996654
No 26
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=98.60 E-value=8.7e-08 Score=74.64 Aligned_cols=60 Identities=20% Similarity=0.166 Sum_probs=49.4
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
+.+|.|+.+|+.||++|++.+.+. ++. ..+++||++.+|+|+.|++....+..+..+-++
T Consensus 61 ~~~H~H~~~e~~~Vl~G~~~~~i~---~~~--~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v~ 120 (126)
T 1vj2_A 61 IDRHSHPWEHEIFVLKGKLTVLKE---QGE--ETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLI 120 (126)
T ss_dssp EEEECCSSCEEEEEEESEEEEECS---SCE--EEEETTEEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred CCceeCCCcEEEEEEEeEEEEEEC---CEE--EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 568999999999999999999885 333 679999999999999999987665555555444
No 27
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.55 E-value=3.6e-07 Score=82.40 Aligned_cols=77 Identities=21% Similarity=0.187 Sum_probs=61.3
Q ss_pred eeeEEEECCCCCCChHHHHhccccccccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCC
Q 025650 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDN 151 (250)
Q Consensus 73 ~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~-ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~ 151 (250)
..-.+++.|+. ....|.|. .+|+.||++|++.+.+.+.+++.....+++||++.+|+|+.|++....+.
T Consensus 53 ~~~~~~l~pg~----------~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~ 122 (361)
T 2vqa_A 53 AGVYMSLEPGA----------IRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIGPD 122 (361)
T ss_dssp EEEEEEECTTC----------EEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECSSS
T ss_pred eeEEEEEcCCC----------CCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCC
Confidence 44567777664 34689999 79999999999999997666643347899999999999999999887655
Q ss_pred cEEEEEee
Q 025650 152 YIKVIPFG 159 (250)
Q Consensus 152 ~vkA~RlF 159 (250)
.+..+-+|
T Consensus 123 ~~~~l~v~ 130 (361)
T 2vqa_A 123 TAKFLLVF 130 (361)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEE
Confidence 66666566
No 28
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.55 E-value=2.2e-07 Score=74.94 Aligned_cols=71 Identities=23% Similarity=0.400 Sum_probs=56.3
Q ss_pred eEEEECCCCCCChHHHHhcccccccc-CcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCC-CccccccCCCCc
Q 025650 75 DFCEVCPEKLPNYEEKIKNFFEEHLH-TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG-CYHRFTLDTDNY 152 (250)
Q Consensus 75 Dvi~l~p~~~Pn~e~kl~~F~~EH~H-~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG-~~HrF~l~~~~~ 152 (250)
-.+++.|+. ....+|.| ..+|++||++|++.+.+. ++. +.+++||.|.+|+| +.|++....+..
T Consensus 49 ~~~~l~pg~---------~~~~~H~H~~~~E~~~Vl~G~~~~~~~---~~~--~~l~~Gd~i~i~~~~~~H~~~n~~~~~ 114 (162)
T 3l2h_A 49 HLIQIEPGK---------ESTEYHLHHYEEEAVYVLSGKGTLTME---NDQ--YPIAPGDFVGFPCHAAAHSISNDGTET 114 (162)
T ss_dssp EEEEECTTC---------BSSSSBEESSCCEEEEEEESCEEEEET---TEE--EEECTTCEEEECTTSCCEEEECCSSSC
T ss_pred EEEEECCCC---------cCCCCccCCCCCEEEEEEEEEEEEEEC---CEE--EEeCCCCEEEECCCCceEEeEeCCCCC
Confidence 447777764 13568999 679999999999999884 443 67999999999998 999998866666
Q ss_pred EEEEEee
Q 025650 153 IKVIPFG 159 (250)
Q Consensus 153 vkA~RlF 159 (250)
+..+-++
T Consensus 115 ~~~l~v~ 121 (162)
T 3l2h_A 115 LVCLVIG 121 (162)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7766555
No 29
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.54 E-value=1.7e-07 Score=75.58 Aligned_cols=61 Identities=23% Similarity=0.337 Sum_probs=50.6
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
..+|.|+..|+.||++|++.+.+.+ +. ...+++||+|.+|+|+.|++....+..+..+-++
T Consensus 61 ~~~H~H~~~E~~~Vl~G~~~~~~~~---~~-~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~ 121 (147)
T 2f4p_A 61 THWHSHPGGQILIVTRGKGFYQERG---KP-ARILKKGDVVEIPPNVVHWHGAAPDEELVHIGIS 121 (147)
T ss_dssp ECSEECTTCEEEEEEEEEEEEEETT---SC-CEEEETTCEEEECTTCCEEEEEBTTBCEEEEEEE
T ss_pred cCceECCCceEEEEEeCEEEEEECC---EE-EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 4589999999999999999998852 21 1479999999999999999998776667766666
No 30
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.51 E-value=5.3e-07 Score=81.29 Aligned_cols=65 Identities=17% Similarity=0.229 Sum_probs=55.1
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~d-dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
...|.|.. +|+.||++|++.+.+.+.+++.....+++||.+++|+|..|++....+..+..+-++
T Consensus 247 ~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~ 312 (361)
T 2vqa_A 247 RQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVF 312 (361)
T ss_dssp EEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred cccccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEE
Confidence 45799998 999999999999999766676456789999999999999999988666667777666
No 31
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.51 E-value=2.8e-07 Score=79.17 Aligned_cols=63 Identities=11% Similarity=0.293 Sum_probs=53.1
Q ss_pred eeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCC
Q 025650 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (250)
Q Consensus 73 ~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~ 150 (250)
..-++++.|+. ...+|.|+.+|+.||++|++.|.+. |+ ...+++||+|.+|+|+.|.+...++
T Consensus 38 ~~~~~~~~~G~----------~~~~h~h~~~~~~~Vl~G~~~~~i~---~~--~~~l~~Gd~~~~p~~~~H~~~a~~~ 100 (227)
T 3rns_A 38 YISLFSLAKDE----------EITAEAMLGNRYYYCFNGNGEIFIE---NN--KKTISNGDFLEITANHNYSIEARDN 100 (227)
T ss_dssp EEEEEEECTTC----------EEEECSCSSCEEEEEEESEEEEEES---SC--EEEEETTEEEEECSSCCEEEEESSS
T ss_pred EEEEEEECCCC----------ccCccccCCCEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEECCC
Confidence 45667777664 5789999999999999999999985 33 2679999999999999999998764
No 32
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.49 E-value=6.1e-07 Score=74.05 Aligned_cols=59 Identities=19% Similarity=0.222 Sum_probs=46.7
Q ss_pred ccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccC-CCCcEEEE
Q 025650 97 EHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD-TDNYIKVI 156 (250)
Q Consensus 97 EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~-~~~~vkA~ 156 (250)
+|.|+.+|+.||++|++.+.+.+ ++..-...+++||.+.+|+|+.|++... .+..++.+
T Consensus 135 ~h~h~~~E~~~Vl~G~~~~~~~~-~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~~~~~l 194 (198)
T 2bnm_A 135 NSGHAGNEFLFVLEGEIHMKWGD-KENPKEALLPTGASMFVEEHVPHAFTAAKGTGSAKLI 194 (198)
T ss_dssp CCCCSSCEEEEEEESCEEEEESC-TTSCEEEEECTTCEEEECTTCCEEEEESTTSCCEEEE
T ss_pred cccCCCeEEEEEEeeeEEEEECC-cCCcccEEECCCCEEEeCCCCceEEEecCCCCCeEEE
Confidence 79999999999999999999953 1111246899999999999999999876 54445443
No 33
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=98.48 E-value=2.1e-07 Score=76.72 Aligned_cols=60 Identities=17% Similarity=0.215 Sum_probs=51.1
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
...|.|..+|+.||++|++.+.+. |+. ..+++||+|.+|+|+.|.+....+..+..+-++
T Consensus 57 ~~~H~H~~~E~~~Vl~G~~~v~v~---g~~--~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~ 116 (156)
T 3kgz_A 57 STLERHAHVHAVMIHRGHGQCLVG---ETI--SDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVV 116 (156)
T ss_dssp CCCBBCSSCEEEEEEEEEEEEEET---TEE--EEEETTCEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred cCceeCCCcEEEEEEeCEEEEEEC---CEE--EEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 468999999999999999999884 443 679999999999999999988766667766666
No 34
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=98.48 E-value=7e-07 Score=74.59 Aligned_cols=75 Identities=15% Similarity=0.245 Sum_probs=56.6
Q ss_pred eeeEEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCC
Q 025650 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDN 151 (250)
Q Consensus 73 ~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~ 151 (250)
..-.+++.|+. ....| |.+ +|+.||++|++.+.+.+.++.. ...+++||++++|+|+.|++....+.
T Consensus 42 ~~~~~~l~pg~----------~~~pH-h~~a~E~~yVl~G~~~v~v~~~~~~~-~~~l~~GDv~~~P~g~~H~~~N~g~~ 109 (178)
T 1dgw_A 42 RVLEYCSKPNT----------LLLPH-HSDSDLLVLVLEGQAILVLVNPDGRD-TYKLDQGDAIKIQAGTPFYLINPDNN 109 (178)
T ss_dssp EEEEEEECTTE----------EEEEE-EESSEEEEEEEESEEEEEEEETTEEE-EEEEETTEEEEECTTCCEEEEECCSS
T ss_pred EEEEEEecCCc----------EecCc-CCCCCEEEEEEeEEEEEEEEeCCCcE-EEEECCCCEEEECCCCeEEEEeCCCC
Confidence 34566777764 35789 664 9999999999999997655433 46899999999999999999876543
Q ss_pred -cEEEEEee
Q 025650 152 -YIKVIPFG 159 (250)
Q Consensus 152 -~vkA~RlF 159 (250)
.+..+-++
T Consensus 110 ~~l~~l~v~ 118 (178)
T 1dgw_A 110 QNLRILKFA 118 (178)
T ss_dssp SCEEEEEEE
T ss_pred CCEEEEEEE
Confidence 55555443
No 35
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.47 E-value=1.8e-07 Score=72.28 Aligned_cols=61 Identities=16% Similarity=0.157 Sum_probs=46.2
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCC-cEEEEEee
Q 025650 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDN-YIKVIPFG 159 (250)
Q Consensus 96 ~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~-~vkA~RlF 159 (250)
.+|.|..+|+.||++|++.+.+.+ +...+.+++||.|.+|+|+.|++...++. ....+-+|
T Consensus 47 ~~~~~~~~E~~~Vl~G~~~l~~~~---~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~ 108 (112)
T 2opk_A 47 FWYDSPQDEWVMVVSGSAGIECEG---DTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVH 108 (112)
T ss_dssp CCBCCSSEEEEEEEESCEEEEETT---CSSCEEECTTEEEEECTTCCEEEEEECSSSCEEEEEEE
T ss_pred ccccCCccEEEEEEeCeEEEEECC---EEEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEE
Confidence 357788999999999999998853 21015799999999999999999865532 44444444
No 36
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.47 E-value=3e-07 Score=68.52 Aligned_cols=59 Identities=14% Similarity=0.161 Sum_probs=46.3
Q ss_pred ccccccCcc-eEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEE
Q 025650 95 FEEHLHTDE-EIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVI 156 (250)
Q Consensus 95 ~~EH~H~dd-EIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~ 156 (250)
..+|.|..+ |+.||++|++.+.+. ++. -...+++||.+.+|+|+.|++....+..++.+
T Consensus 31 ~~~H~H~~~~e~~~Vl~G~~~~~~~--~g~-~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l 90 (97)
T 2fqp_A 31 TGWHRHSMDYVVVPMTTGPLLLETP--EGS-VTSQLTRGVSYTRPEGVEHNVINPSDTEFVFV 90 (97)
T ss_dssp CCSEECCSCEEEEESSCEEEEEEET--TEE-EEEEECTTCCEEECTTCEEEEECCSSSCEEEE
T ss_pred CCCEECCCCcEEEEEeecEEEEEeC--CCC-EEEEEcCCCEEEeCCCCcccCEeCCCCcEEEE
Confidence 458999986 699999999999885 221 13679999999999999999987655445433
No 37
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.46 E-value=3.2e-07 Score=83.98 Aligned_cols=58 Identities=21% Similarity=0.253 Sum_probs=49.7
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcE
Q 025650 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (250)
Q Consensus 94 F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~v 153 (250)
=++|| |++ ||.||+++|.....++| +++--.|.+.+||+++||+|++|+....++...
T Consensus 43 R~d~H-~~~~dE~FyqlkG~m~l~~~d-~g~~~~V~i~eGemfllP~gv~HsP~r~~et~g 101 (286)
T 2qnk_A 43 RKDYH-IEEGEEVFYQLEGDMVLRVLE-QGKHRDVVIRQGEIFLLPARVPHSPQRFANTVG 101 (286)
T ss_dssp CCCEE-ECSSCEEEEEEESCEEEEEEE-TTEEEEEEECTTEEEEECTTCCEEEEECTTCEE
T ss_pred CccCc-CCCCCeEEEEEeCeEEEEEEe-CCceeeEEECCCeEEEeCCCCCcCCcccCCeEE
Confidence 37899 876 99999999999999996 455667999999999999999999988665433
No 38
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.46 E-value=4.3e-07 Score=82.88 Aligned_cols=75 Identities=19% Similarity=0.184 Sum_probs=60.3
Q ss_pred eeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcE
Q 025650 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (250)
Q Consensus 74 ~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~v 153 (250)
.-.+++.|+. ....|.|..+|++||++|++.+.+.+.+++.+...+++||++++|+|+.|++...++ .+
T Consensus 81 ~~~~~l~pg~----------~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~-~~ 149 (385)
T 1j58_A 81 SVNMRLKPGA----------IRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEE-GA 149 (385)
T ss_dssp EEEEEECTTC----------EEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEE-EE
T ss_pred EEEEEECCCC----------CCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECCC-CE
Confidence 3456677653 456899999999999999999999877777655689999999999999999987653 35
Q ss_pred EEEEee
Q 025650 154 KVIPFG 159 (250)
Q Consensus 154 kA~RlF 159 (250)
..+-+|
T Consensus 150 ~~~~v~ 155 (385)
T 1j58_A 150 EFLLVF 155 (385)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555556
No 39
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.46 E-value=2.5e-07 Score=68.52 Aligned_cols=60 Identities=25% Similarity=0.267 Sum_probs=47.3
Q ss_pred cccccccCc-ceE-EEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 94 FFEEHLHTD-EEI-RYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 94 F~~EH~H~d-dEI-r~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
...+|.|+. .|+ .||++|++.+.+.+ ++ ...+++||++.+|+|+.|++...++ ...+-+|
T Consensus 45 ~~~~H~H~~~~e~~~~vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~~~ 106 (110)
T 2q30_A 45 ELPVHSHNIEGELNIVVLEGEGEFVGDG--DA--VIPAPRGAVLVAPISTPHGVRAVTD--MKVLVTI 106 (110)
T ss_dssp EEEEECCSSSCEEEEEEEESCEEEECGG--GC--EEEECTTEEEEEETTSCEEEEESSS--EEEEEEE
T ss_pred cCCcccCCCCccEEEEEEeCEEEEEeCC--CE--EEEECCCCEEEeCCCCcEEEEEcCC--cEEEEEE
Confidence 456899996 688 89999999998741 23 3679999999999999999988764 3445455
No 40
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.45 E-value=8.4e-07 Score=72.85 Aligned_cols=71 Identities=20% Similarity=0.250 Sum_probs=56.5
Q ss_pred eEEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCC--CccccccCCCC
Q 025650 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG--CYHRFTLDTDN 151 (250)
Q Consensus 75 Dvi~l~p~~~Pn~e~kl~~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG--~~HrF~l~~~~ 151 (250)
-++++.|+. .....|.|.. +|++||++|++.+.+. ++ .+.+++||.|.+|+| +.|++....+.
T Consensus 46 ~~~~l~pG~---------~~~~~H~H~~~eE~~~Vl~G~~~~~~~---~~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~ 111 (163)
T 3i7d_A 46 NLVRLEPGA---------KSSLRHYHMEQDEFVMVTEGALVLVDD---QG--EHPMVPGDCAAFPAGDPNGHQFVNRTDA 111 (163)
T ss_dssp EEEEECTTC---------BSSSSEEESSCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCCCBEEECCSSS
T ss_pred EEEEECCCC---------cCCCCccCCCCcEEEEEEECEEEEEEC---CE--EEEeCCCCEEEECCCCCcceEEEECCCC
Confidence 467777764 1225899998 7999999999999885 44 478999999999999 99999886666
Q ss_pred cEEEEEee
Q 025650 152 YIKVIPFG 159 (250)
Q Consensus 152 ~vkA~RlF 159 (250)
.++.+-++
T Consensus 112 ~~~~l~v~ 119 (163)
T 3i7d_A 112 PATFLVVG 119 (163)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEE
Confidence 66666555
No 41
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=98.45 E-value=3.1e-07 Score=72.44 Aligned_cols=76 Identities=12% Similarity=0.182 Sum_probs=53.4
Q ss_pred eeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCc
Q 025650 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (250)
Q Consensus 73 ~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~ 152 (250)
..-.+++.|+. -+.+|. ..+|+.||++|++.+.+ +|+ .+.+++||.|.+|+|+.|++...+ ..
T Consensus 41 ~~~~~~~~pG~----------~~~~H~-~~~E~~~Vl~G~~~~~~---~g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~ 103 (119)
T 3lwc_A 41 TIGYGRYAPGQ----------SLTETM-AVDDVMIVLEGRLSVST---DGE--TVTAGPGEIVYMPKGETVTIRSHE-EG 103 (119)
T ss_dssp EEEEEEECTTC----------EEEEEC-SSEEEEEEEEEEEEEEE---TTE--EEEECTTCEEEECTTCEEEEEEEE-EE
T ss_pred EEEEEEECCCC----------CcCccC-CCCEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCEEEEEcCC-CC
Confidence 33556677663 245775 67999999999999988 354 367999999999999999998753 23
Q ss_pred EEEEEeeecCCCccceee
Q 025650 153 IKVIPFGLHSTVPMIIYP 170 (250)
Q Consensus 153 vkA~RlF~~~~~P~GWv~ 170 (250)
.+. || ...|. |..
T Consensus 104 ~~~--l~--v~~P~-w~~ 116 (119)
T 3lwc_A 104 ALT--AY--VTYPH-WRP 116 (119)
T ss_dssp EEE--EE--EEECC----
T ss_pred eEE--EE--EECCC-Ccc
Confidence 333 34 34566 864
No 42
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=98.44 E-value=3.6e-07 Score=76.15 Aligned_cols=60 Identities=15% Similarity=0.138 Sum_probs=50.2
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
...|.|..+|+.||++|++.+.+. |+. ..+++||+|.+|+|+.|++....+..+..+-++
T Consensus 66 ~~~H~H~~~E~~~Vl~G~~~~~v~---g~~--~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~ 125 (166)
T 3jzv_A 66 STLERHQHAHGVMILKGRGHAMVG---RAV--SAVAPYDLVTIPGWSWHQFRAPADEALGFLCMV 125 (166)
T ss_dssp CCCBBCSSCEEEEEEEECEEEEET---TEE--EEECTTCEEEECTTCCEEEECCTTSCEEEEEEE
T ss_pred cCceeCCCcEEEEEEeCEEEEEEC---CEE--EEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 468999999999999999999884 443 679999999999999999987666666655555
No 43
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.43 E-value=6.8e-07 Score=70.42 Aligned_cols=57 Identities=23% Similarity=0.317 Sum_probs=46.6
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEE
Q 025650 95 FEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVI 156 (250)
Q Consensus 95 ~~EH~H~-ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~ 156 (250)
..+|.|. .+|+.||++|++.+.+. ++. ..+++||.+.+|+|+.|++....+..+..+
T Consensus 70 ~~~H~H~~~~E~~~Vl~G~~~~~i~---~~~--~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l 127 (133)
T 1o4t_A 70 VGLHKHEGEFEIYYILLGEGVFHDN---GKD--VPIKAGDVCFTDSGESHSIENTGNTDLEFL 127 (133)
T ss_dssp EEEEECCSEEEEEEEEESEEEEEET---TEE--EEEETTEEEEECTTCEEEEECCSSSCEEEE
T ss_pred cCceECCCccEEEEEEeCEEEEEEC---CEE--EEeCCCcEEEECCCCcEEeEECCCCCEEEE
Confidence 4589998 59999999999999884 443 679999999999999999987655444433
No 44
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.41 E-value=9.2e-07 Score=75.97 Aligned_cols=57 Identities=26% Similarity=0.370 Sum_probs=46.8
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEE
Q 025650 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVI 156 (250)
Q Consensus 94 F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~ 156 (250)
...+|.|+.+|+.||++|++.+.+. |++ ..+++||.|.+|+|+.|++..+ ...++.+
T Consensus 165 ~~~~H~H~~~e~~~Vl~G~~~~~i~---g~~--~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~l 221 (227)
T 3rns_A 165 SLDPHKAPGDALVTVLDGEGKYYVD---GKP--FIVKKGESAVLPANIPHAVEAE-TENFKML 221 (227)
T ss_dssp EEEEECCSSEEEEEEEEEEEEEEET---TEE--EEEETTEEEEECTTSCEEEECC-SSCEEEE
T ss_pred ccCCEECCCcEEEEEEeEEEEEEEC---CEE--EEECCCCEEEECCCCcEEEEeC-CCCEEEE
Confidence 3579999999999999999999884 454 6799999999999999999983 2234433
No 45
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=98.40 E-value=9.5e-07 Score=67.97 Aligned_cols=75 Identities=15% Similarity=0.222 Sum_probs=53.2
Q ss_pred hcCCCeeeEEEECCCCCCChHHHHhcccc-ccccCcc-eEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCcccc
Q 025650 68 DRGYSYMDFCEVCPEKLPNYEEKIKNFFE-EHLHTDE-EIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRF 145 (250)
Q Consensus 68 erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~-EH~H~dd-EIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF 145 (250)
..++ ..-++++.|+. ... .|.|+.. +++||++|++.+.+. ++ ...+++||++.+|+|+.|++
T Consensus 23 ~~~~-~~~~~~~~pg~----------~~~~~H~H~~~e~~~~vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H~~ 86 (125)
T 3cew_A 23 LTGA-EVSINHLPAGA----------GVPFVHSHKQNEEIYGILSGKGFITID---GE--KIELQAGDWLRIAPDGKRQI 86 (125)
T ss_dssp CSSC-EEEEEEECTTC----------BCSSEEEESSEEEEEEEEEEEEEEEET---TE--EEEEETTEEEEECTTCCEEE
T ss_pred CCCc-EEEEEEECCCC----------CCCCCccCCCceEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEE
Confidence 4444 23455666653 233 7999975 566699999999884 44 36799999999999999999
Q ss_pred ccCCCCcEEEEEe
Q 025650 146 TLDTDNYIKVIPF 158 (250)
Q Consensus 146 ~l~~~~~vkA~Rl 158 (250)
...++..+..+-+
T Consensus 87 ~~~~~~~~~~~~i 99 (125)
T 3cew_A 87 SAASDSPIGFLCI 99 (125)
T ss_dssp EEBTTBCEEEEEE
T ss_pred EcCCCCCEEEEEE
Confidence 8765444544433
No 46
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.39 E-value=3.3e-07 Score=70.70 Aligned_cols=49 Identities=18% Similarity=0.278 Sum_probs=41.6
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCC
Q 025650 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 96 ~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
.+| |+.+|+.||++|++.+.+. +++. +.+++||.|.+|+|+.|++...+
T Consensus 44 ~~h-H~~~E~~~Vl~G~~~~~i~--~g~~--~~l~~GD~i~ip~g~~H~~~n~~ 92 (101)
T 1o5u_A 44 DWY-YDTNETCYILEGKVEVTTE--DGKK--YVIEKGDLVTFPKGLRCRWKVLE 92 (101)
T ss_dssp EEE-CSSCEEEEEEEEEEEEEET--TCCE--EEEETTCEEEECTTCEEEEEEEE
T ss_pred ccc-CCceEEEEEEeCEEEEEEC--CCCE--EEECCCCEEEECCCCcEEEEeCC
Confidence 467 8899999999999999884 2443 67999999999999999987644
No 47
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.39 E-value=1.6e-06 Score=79.04 Aligned_cols=65 Identities=17% Similarity=0.155 Sum_probs=53.8
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~d-dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
...|.|.. +|+.||++|++.+.+.+.+++--...+++||.+.+|+|+.|++....+..+..+-++
T Consensus 270 ~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~ 335 (385)
T 1j58_A 270 RELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIF 335 (385)
T ss_dssp EEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEE
T ss_pred cCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEE
Confidence 45799998 999999999999999755553235789999999999999999987666667766666
No 48
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.37 E-value=1.6e-06 Score=76.38 Aligned_cols=58 Identities=19% Similarity=0.280 Sum_probs=48.1
Q ss_pred cc-cccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCC-CcEEEEEe
Q 025650 96 EE-HLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD-NYIKVIPF 158 (250)
Q Consensus 96 ~E-H~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~-~~vkA~Rl 158 (250)
.+ |.|..+|+.||++|++.+.+. |++ ..+++||.|.+|+|+.|++....+ ..++.+-+
T Consensus 196 ~~~H~H~~~E~~yVl~G~~~~~i~---~~~--~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~ 255 (274)
T 1sef_A 196 AYIETHVQEHGAYLISGQGMYNLD---NEW--YPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYS 255 (274)
T ss_dssp SSCBCCSCCEEEEEEECEEEEEET---TEE--EEEETTCEEEECTTCCEEEEEECSSSCEEEEEE
T ss_pred CcceeccCeEEEEEEeCEEEEEEC---CEE--EEECCCCEEEECCCCCEEEEeCCCCCCEEEEEE
Confidence 45 999999999999999999884 555 679999999999999999987665 55554433
No 49
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.37 E-value=9.2e-07 Score=84.59 Aligned_cols=76 Identities=11% Similarity=0.174 Sum_probs=61.0
Q ss_pred eeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCC-CC
Q 025650 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DN 151 (250)
Q Consensus 73 ~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~-~~ 151 (250)
..-.+++.|+. +...|.|..+|+.||++|+|.+.+-+.++. ....+++||++.+|+|+.||+.... +.
T Consensus 87 s~~~~~l~Pgg----------~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~ 155 (445)
T 2cav_A 87 RVLEYCSKPNT----------LLLPHHSDSDLLVLVLEGQAILVLVNPDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQ 155 (445)
T ss_dssp EEEEEEECSSE----------EEEEEEESSEEEEEEEESEEEEEEEETTEE-EEEEEETTEEEEECTTCCEEEEECCSSC
T ss_pred EEEEEEECCCc----------CccCcCCCCceEEEEEeCEEEEEEEeCCCC-EEEEecCCCEEEECCCCcEEEEECCCCC
Confidence 34567788774 567885667999999999999998765544 4678999999999999999998765 56
Q ss_pred cEEEEEee
Q 025650 152 YIKVIPFG 159 (250)
Q Consensus 152 ~vkA~RlF 159 (250)
.++++-+|
T Consensus 156 ~l~~l~v~ 163 (445)
T 2cav_A 156 NLRILKFA 163 (445)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEe
Confidence 77777777
No 50
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.35 E-value=9e-07 Score=73.01 Aligned_cols=53 Identities=17% Similarity=0.141 Sum_probs=44.4
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcE
Q 025650 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (250)
Q Consensus 96 ~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~v 153 (250)
.+|.|..+|+.||++|++.+.+. |+. ..+++||.|.+|+|+.|++....+...
T Consensus 120 ~~H~h~~~E~~~Vl~G~~~~~~~---~~~--~~l~~GD~i~i~~~~~H~~~n~~~~~~ 172 (192)
T 1y9q_A 120 SPHALGVIEYIHVLEGIMKVFFD---EQW--HELQQGEHIRFFSDQPHGYAAVTEKAV 172 (192)
T ss_dssp CCCSTTCEEEEEEEESCEEEEET---TEE--EEECTTCEEEEECSSSEEEEESSSCEE
T ss_pred CCCCCCCEEEEEEEEeEEEEEEC---CEE--EEeCCCCEEEEcCCCCeEeECCCCCcE
Confidence 37888889999999999999884 554 579999999999999999987554333
No 51
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.31 E-value=1.1e-06 Score=75.98 Aligned_cols=60 Identities=20% Similarity=0.150 Sum_probs=52.0
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
..+|.|..+|+.||++|++.+.+. +++ +.+++||.|.+|+|+.|++....+..+..+-+|
T Consensus 159 ~~~H~H~~~e~~~Vl~G~~~~~i~---~~~--~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~ 218 (243)
T 3h7j_A 159 MPFHKHRNEQIGICIGGGYDMTVE---GCT--VEMKFGTAYFCEPREDHGAINRSEKESKSINIF 218 (243)
T ss_dssp EEEECCSSEEEEEECSSCEEEEET---TEE--EEECTTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred CCCEeCCCcEEEEEEECEEEEEEC---CEE--EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 468999999999999999999874 444 569999999999999999998777677777777
No 52
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.30 E-value=8.4e-07 Score=74.81 Aligned_cols=55 Identities=18% Similarity=0.211 Sum_probs=44.9
Q ss_pred cccccCc-ceEEEEEe--ceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 96 EEHLHTD-EEIRYCVA--GSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 96 ~EH~H~d-dEIr~Ile--GsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
.+|.|.. +|++||++ |+|.|.+. |++ +.+++||+|+||+|+.|++. + .++.+=++
T Consensus 59 ~~H~H~~~~E~~yVLe~~G~g~v~id---ge~--~~l~~GD~v~IPpg~~H~i~-g---~l~~L~I~ 116 (157)
T 4h7l_A 59 RTHYHREHQEIYVVLDHAAHATIELN---GQS--YPLTKLLAISIPPLVRHRIV-G---EATIINIV 116 (157)
T ss_dssp CCBBCSSCEEEEEEEEECTTCEEEET---TEE--EECCTTEEEEECTTCCEEEE-S---CEEEEEEE
T ss_pred cceECCCCcEEEEEEecCcEEEEEEC---CEE--EEeCCCCEEEECCCCeEeeE-C---CEEEEEEE
Confidence 5899975 89999999 99999984 554 67999999999999999996 2 35544444
No 53
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.29 E-value=1.7e-06 Score=81.90 Aligned_cols=76 Identities=12% Similarity=0.172 Sum_probs=60.9
Q ss_pred eeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccC-CCC
Q 025650 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD-TDN 151 (250)
Q Consensus 73 ~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~-~~~ 151 (250)
..-.+++.|+. +...|.|..+|+.||++|+|.+.+-+. +.-....+++||++.+|+|+.||+... .+.
T Consensus 50 s~~~~~l~PGg----------~~~pHh~~a~E~~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e 118 (416)
T 1uij_A 50 RIVQFQSKPNT----------ILLPHHADADFLLFVLSGRAILTLVNN-DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQ 118 (416)
T ss_dssp EEEEEEECTTE----------EEEEEEESEEEEEEEEESCEEEEEECS-SCEEEEEECTTEEEEECTTCEEEEEECCSSC
T ss_pred EEEEEEeccCc----------CcccccCCCceEEEEEeeEEEEEEEEC-CCCeEEEecCCCEEEECCCCeEEEEecCCCC
Confidence 45677888875 567895556999999999999998654 333457899999999999999999876 466
Q ss_pred cEEEEEee
Q 025650 152 YIKVIPFG 159 (250)
Q Consensus 152 ~vkA~RlF 159 (250)
.+.++-++
T Consensus 119 ~l~~l~~~ 126 (416)
T 1uij_A 119 NLKMIWLA 126 (416)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEe
Confidence 77777776
No 54
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.28 E-value=2.2e-06 Score=81.72 Aligned_cols=76 Identities=11% Similarity=0.180 Sum_probs=59.4
Q ss_pred eeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCC-CC
Q 025650 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DN 151 (250)
Q Consensus 73 ~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~-~~ 151 (250)
..-.+++.|+. +...|.|..+|++||++|+|.+.+-+. +.-....+++||++++|+|+.||+.... +.
T Consensus 62 s~~~~~l~PGg----------~~~pHh~~a~Ei~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e 130 (434)
T 2ea7_A 62 RVVEFKSKPNT----------LLLPHHADADFLLVVLNGTAVLTLVNP-DSRDSYILEQGHAQKIPAGTTFFLVNPDDNE 130 (434)
T ss_dssp EEEEEEECTTE----------EEEEEEESEEEEEEEEESEEEEEEECS-SCEEEEEEETTEEEEECTTCEEEEEECCSSC
T ss_pred EEEEEEecCCc----------CccCccCCCceEEEEEecEEEEEEEeC-CCCEEEEeCCCCEEEECCCccEEEEeCCCCC
Confidence 44677888775 567894456999999999999998754 3344578999999999999999998765 55
Q ss_pred cEEEEEee
Q 025650 152 YIKVIPFG 159 (250)
Q Consensus 152 ~vkA~RlF 159 (250)
.+.++-+|
T Consensus 131 ~l~~l~~~ 138 (434)
T 2ea7_A 131 NLRIIKLA 138 (434)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEe
Confidence 66666665
No 55
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.27 E-value=3.1e-06 Score=82.13 Aligned_cols=65 Identities=14% Similarity=0.270 Sum_probs=54.2
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCC-CeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 94 F~~EH~H~d-dEIr~IleGsG~Fdvrd~~-d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
.+..|.|+. +|+.||++|++.+.+.+.+ .+++...+++||+++||+|..|+...++ ..+..+-+|
T Consensus 379 ~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n~~-e~~~~l~~~ 445 (493)
T 2d5f_A 379 IYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQGGE-QGLEYVVFK 445 (493)
T ss_dssp EEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEE-EEEEEEEEE
T ss_pred eeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEeeeeCC-CCEEEEEEE
Confidence 478999995 8999999999999998764 4566678999999999999999988754 456666666
No 56
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.27 E-value=4.2e-06 Score=80.79 Aligned_cols=65 Identities=17% Similarity=0.346 Sum_probs=54.3
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCC-CeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 94 F~~EH~H~d-dEIr~IleGsG~Fdvrd~~-d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
....|.|+. +|+.||++|++.+.+-+.+ .+++...+++||+++||+|..|+...+ +..+..+-|+
T Consensus 350 ~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng-~~~l~~l~f~ 416 (476)
T 1fxz_A 350 MFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQ-SDNFEYVSFK 416 (476)
T ss_dssp EEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-STTEEEEEEE
T ss_pred eecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeC-CCCEEEEEEE
Confidence 478999995 8999999999999998654 356677899999999999999999885 4566666565
No 57
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.25 E-value=1.7e-06 Score=83.57 Aligned_cols=79 Identities=14% Similarity=0.211 Sum_probs=64.3
Q ss_pred CCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeE----------------------EEE
Q 025650 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKW----------------------IRI 127 (250)
Q Consensus 70 GY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~w----------------------irI 127 (250)
|+. .=.++|.|+. +...|.|..+|+.||++|+|++.+-+.++.. ...
T Consensus 47 gvs-~~r~~l~Pgg----------l~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~ 115 (476)
T 1fxz_A 47 GVA-LSRCTLNRNA----------LRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIY 115 (476)
T ss_dssp TCE-EEEEEECTTE----------EEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCEE
T ss_pred ceE-EEEEEEcCCC----------EecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEE
Confidence 774 4456787764 7789999999999999999999998654320 125
Q ss_pred EEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 128 WVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 128 ~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
.+++||+|.+|+|+.||+..+.+..+.++-+|
T Consensus 116 ~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~ 147 (476)
T 1fxz_A 116 NFREGDLIAVPTGVAWWMYNNEDTPVVAVSII 147 (476)
T ss_dssp EECTTEEEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred EEeCCCEEEECCCCcEEEEeCCCCCEEEEEEe
Confidence 79999999999999999998877788888888
No 58
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.24 E-value=6.7e-07 Score=79.06 Aligned_cols=61 Identities=18% Similarity=0.140 Sum_probs=47.7
Q ss_pred ccccccC-cceEEEEEeceEEEEE--------EeC-------CCeEEEEEEecCCEEEeCCCCccccccCCCCcEEE
Q 025650 95 FEEHLHT-DEEIRYCVAGSGYFDV--------RDR-------NEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKV 155 (250)
Q Consensus 95 ~~EH~H~-ddEIr~IleGsG~Fdv--------rd~-------~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA 155 (250)
...|.|. .+|++||++|++.+.+ .+. +++...+.+++||++.+|+|+.|.|...++...+.
T Consensus 56 ~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~ 132 (239)
T 2xlg_A 56 PMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPI 132 (239)
T ss_dssp CCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEE
T ss_pred CCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEE
Confidence 3589999 6999999999999998 321 11233578999999999999999999766544554
No 59
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.23 E-value=4.7e-06 Score=81.36 Aligned_cols=65 Identities=20% Similarity=0.329 Sum_probs=54.4
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 94 F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d-~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
....|.|+. +|+.||++|++.+.+-+.++ +.+...+++||+++||+|+.|+...+ +..+..+-++
T Consensus 384 ~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~Ng-~e~l~~l~f~ 450 (510)
T 3c3v_A 384 LFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKSQ-SDNFEYVAFK 450 (510)
T ss_dssp EEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEE
T ss_pred eecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEeC-CCCEEEEEEE
Confidence 478999994 89999999999999986653 56667799999999999999999885 5566666566
No 60
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.22 E-value=9e-07 Score=70.72 Aligned_cols=65 Identities=18% Similarity=0.211 Sum_probs=49.9
Q ss_pred CCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCC
Q 025650 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 70 GY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
|-...-+..+.|+. +.+|.|..+|+.|||+|++.+.+. +++. +.+++||.+++|+|..|++...+
T Consensus 47 g~~~~g~w~~~pG~-----------~~~~~~~~~E~~~Vl~G~~~l~~~--~g~~--~~l~~GD~~~ip~g~~h~~~~~~ 111 (123)
T 3bcw_A 47 GKVESGVWESTSGS-----------FQSNTTGYIEYCHIIEGEARLVDP--DGTV--HAVKAGDAFIMPEGYTGRWEVDR 111 (123)
T ss_dssp TTEEEEEEEEEEEE-----------EECCCTTEEEEEEEEEEEEEEECT--TCCE--EEEETTCEEEECTTCCCEEEEEE
T ss_pred CCEEEEEEEECCCc-----------eeeEcCCCcEEEEEEEEEEEEEEC--CCeE--EEECCCCEEEECCCCeEEEEECC
Confidence 43455566666553 346777669999999999998874 3443 67999999999999999998754
No 61
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.22 E-value=2.9e-06 Score=82.24 Aligned_cols=78 Identities=14% Similarity=0.106 Sum_probs=64.2
Q ss_pred cCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCC--------------------------
Q 025650 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNE-------------------------- 122 (250)
Q Consensus 69 rGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d-------------------------- 122 (250)
.|| ..-.++|.|+. +...|.|+.+|+.||++|+|++.+-..+.
T Consensus 43 ~gv-~~~r~~i~pgg----------l~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~ 111 (493)
T 2d5f_A 43 AGV-TVSKRTLNRNG----------LHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSH 111 (493)
T ss_dssp HTC-EEEEEEECTTE----------EEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEE
T ss_pred CCE-EEEEEEeCCCc----------EeCceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccc
Confidence 465 45668888875 67799999999999999999999874331
Q ss_pred -eEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 123 -KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 123 -~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
++ ..+++||+|+||||+.||+..+.+..+.++-+|
T Consensus 112 qkv--~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~ 147 (493)
T 2d5f_A 112 QKI--RHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLL 147 (493)
T ss_dssp SCE--EEEETTEEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred ceE--EEecCCCEEEECCCCcEEEEeCCCCCEEEEEEe
Confidence 23 379999999999999999998877788888777
No 62
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.21 E-value=2.8e-06 Score=82.14 Aligned_cols=79 Identities=16% Similarity=0.200 Sum_probs=63.3
Q ss_pred CCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCC-CeEE-----------------------
Q 025650 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRN-EKWI----------------------- 125 (250)
Q Consensus 70 GY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~-d~wi----------------------- 125 (250)
|+.. =-++|.|+. +...|.|..+|+.||++|+|++.+-..+ .+.+
T Consensus 49 gvs~-~R~~i~P~g----------l~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~~~~~ 117 (465)
T 3qac_A 49 GVSV-IRRTIEPHG----------LLLPSFTSAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQGSRKF 117 (465)
T ss_dssp TCEE-EEEEECTTE----------EEEEEEESSCEEEEEEECEEEEEEECTTCCCCC-----------------------
T ss_pred ceEE-EEEEEcCCc----------CcccEEcCCCEEEEEEECcEEEEEecCCCCceeecchhcccccccccccccccccc
Confidence 7654 446677764 7789999889999999999999987443 1211
Q ss_pred -------------EEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 126 -------------RIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 126 -------------rI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
...+++||+|.||+|+.||+..+.+..+.++-+|
T Consensus 118 ~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~ 164 (465)
T 3qac_A 118 GMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILI 164 (465)
T ss_dssp -------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred ccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEE
Confidence 2478999999999999999998878889988887
No 63
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.21 E-value=2e-06 Score=82.69 Aligned_cols=79 Identities=16% Similarity=0.211 Sum_probs=62.7
Q ss_pred CCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCe-E--------------------EEEE
Q 025650 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-W--------------------IRIW 128 (250)
Q Consensus 70 GY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~-w--------------------irI~ 128 (250)
|+ ..--++|.|+. +...|.|..+|+.||++|+|++.+-+.++. . ....
T Consensus 62 gv-s~~r~~i~pgg----------l~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~ 130 (459)
T 2e9q_A 62 GV-NMIRHTIRPKG----------LLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRP 130 (459)
T ss_dssp TE-EEEEEEECTTE----------EEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEE
T ss_pred ce-EEEEEEEcCCC----------EecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEE
Confidence 65 34447787764 677999999999999999999998644421 1 1247
Q ss_pred EecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 129 VKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 129 ~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
+++||+|++|+|+.||+..+.+..+.++-+|
T Consensus 131 l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~ 161 (459)
T 2e9q_A 131 FREGDLLVVPAGVSHWMYNRGQSDLVLIVFA 161 (459)
T ss_dssp EETTEEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred ecCCCEEEECCCCCEEEEeCCCCCEEEEEEe
Confidence 9999999999999999998777788888777
No 64
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.20 E-value=3.6e-06 Score=74.32 Aligned_cols=60 Identities=17% Similarity=0.343 Sum_probs=48.9
Q ss_pred cccccccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 94 FFEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 94 F~~EH~H~-ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
....|.|. .+|++||++|++.+.+. ++. ..+++||+|.+|+|+.|.+...+++ .+.+-++
T Consensus 58 ~~~~h~H~~~~e~~~Vl~G~~~~~~~---~~~--~~l~~Gd~~~~p~~~~H~~~n~~~~-~~~~~~~ 118 (337)
T 1y3t_A 58 AFPLHVHKDTHEGILVLDGKLELTLD---GER--YLLISGDYANIPAGTPHSYRMQSHR-TRLVSYT 118 (337)
T ss_dssp EEEEEECTTCCEEEEEEESCEEEEET---TEE--EEECTTCEEEECTTCCEEEEECSTT-EEEEEEE
T ss_pred CCCceeCCCceEEEEEEECEEEEEEC---CEE--EEECCCCEEEECCCCcEEEEECCCC-eEEEEEE
Confidence 34679999 79999999999999884 443 6799999999999999999986653 5555444
No 65
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.20 E-value=3e-06 Score=77.78 Aligned_cols=55 Identities=24% Similarity=0.317 Sum_probs=46.2
Q ss_pred ccccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCC
Q 025650 97 EHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDN 151 (250)
Q Consensus 97 EH~H~-ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~ 151 (250)
.|.|. .+|++||++|++.+.+.+.++..-.+.+++||.|.+|+|+.|+|....+.
T Consensus 65 ~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~ 120 (350)
T 1juh_A 65 PHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPD 120 (350)
T ss_dssp CEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTT
T ss_pred cccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCC
Confidence 79998 79999999999999998644432357899999999999999999875543
No 66
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.18 E-value=3.7e-06 Score=75.91 Aligned_cols=67 Identities=13% Similarity=0.314 Sum_probs=55.4
Q ss_pred eEEEECCCCCCChHHHHhcccc-ccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcE
Q 025650 75 DFCEVCPEKLPNYEEKIKNFFE-EHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (250)
Q Consensus 75 Dvi~l~p~~~Pn~e~kl~~F~~-EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~v 153 (250)
-++++.|+. ... -|+|..+|..|||+|+|.+.+ +++| +.+++||+|.+|+|..|+|....+..+
T Consensus 189 ~~~t~~PG~----------~~p~~e~H~~eh~~~vL~G~g~y~l---~~~~--~~V~~GD~i~~~~~~~h~~~n~G~e~~ 253 (266)
T 4e2q_A 189 HTMDFQPGE----------FLNVKEVHYNQHGLLLLEGQGIYRL---GDNW--YPVQAGDVIWMAPFVPQWYAALGKTRS 253 (266)
T ss_dssp EEEEECTTC----------BCSSCCCCSCCEEEEEEECEEEEEE---TTEE--EEEETTCEEEECTTCCEEEEEESSSCE
T ss_pred EEEEECCCc----------CcCCceEcccceEEEEEeceEEEEE---CCEE--EEecCCCEEEECCCCcEEEEeCCCCCE
Confidence 567777775 222 588999999999999999987 4778 579999999999999999998776677
Q ss_pred EEE
Q 025650 154 KVI 156 (250)
Q Consensus 154 kA~ 156 (250)
+.+
T Consensus 254 ~yl 256 (266)
T 4e2q_A 254 RYL 256 (266)
T ss_dssp EEE
T ss_pred EEE
Confidence 755
No 67
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.18 E-value=1.3e-06 Score=82.08 Aligned_cols=57 Identities=30% Similarity=0.556 Sum_probs=48.0
Q ss_pred ccccccCcceEEEEEeceEE-EEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEE
Q 025650 95 FEEHLHTDEEIRYCVAGSGY-FDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVI 156 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~-Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~ 156 (250)
...|.|..+|++||++|+|. +.+ +|+ ++.+++||+|++|+|..|.+..+.+..+..+
T Consensus 116 ~~~HrH~~~ev~~VleG~G~~~~v---dG~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l 173 (368)
T 3nw4_A 116 APEHRHSQNAFRFVVEGEGVWTVV---NGD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWI 173 (368)
T ss_dssp EEEEEESSCEEEECSSCEEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred cCceecccceEEEEEecceEEEEE---CCE--EEEEeCCCEEEECCCCcEEeEeCCCCCeEEE
Confidence 67899999999999999995 555 344 5889999999999999999998776666653
No 68
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.17 E-value=3.9e-06 Score=74.13 Aligned_cols=59 Identities=25% Similarity=0.466 Sum_probs=49.2
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 95 FEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~-ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
..+|.|. .+|+.||++|++.+.+. +++ +.+++||.+.+|+|+.|++....+ ..+.+-+|
T Consensus 231 ~~~h~H~~~~e~~~vl~G~~~~~i~---~~~--~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~ 290 (337)
T 1y3t_A 231 IVDHYHEYHTETFYCLEGQMTMWTD---GQE--IQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVL 290 (337)
T ss_dssp CCCEECSSCEEEEEEEESCEEEEET---TEE--EEECTTCEEEECTTCCEEEEECSS-SEEEEEEE
T ss_pred CCCcCCCCCcEEEEEEeCEEEEEEC---CEE--EEECCCCEEEECCCCeEEEEECCC-CeEEEEEE
Confidence 4579999 69999999999999884 454 679999999999999999998766 56655555
No 69
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.16 E-value=2.5e-06 Score=71.17 Aligned_cols=48 Identities=21% Similarity=0.458 Sum_probs=40.2
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccC
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~ 148 (250)
+.|| |+.||+.|||+|++.+.+ +|+ .+.+++||.|.+|+|+.|+|...
T Consensus 78 ~~~~-~~~eE~~yVLeG~~~l~i---~g~--~~~l~~GD~i~iP~G~~h~~~n~ 125 (151)
T 4axo_A 78 FDWT-LNYDEIDYVIDGTLDIII---DGR--KVSASSGELIFIPKGSKIQFSVP 125 (151)
T ss_dssp EEEE-CSSEEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCEEEEEEE
T ss_pred ccEe-CCCcEEEEEEEeEEEEEE---CCE--EEEEcCCCEEEECCCCEEEEEeC
Confidence 4454 567999999999998887 354 37899999999999999999975
No 70
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.16 E-value=3.6e-06 Score=82.13 Aligned_cols=80 Identities=14% Similarity=0.188 Sum_probs=64.5
Q ss_pred cCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCe-------------------------
Q 025650 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK------------------------- 123 (250)
Q Consensus 69 rGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~------------------------- 123 (250)
.|+. .=.++|.|+. +...|.|...|+.||++|+|++.+-+.++.
T Consensus 46 ~gvs-~~r~~i~p~g----------l~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~ 114 (510)
T 3c3v_A 46 AGVA-LSRLVLRRNA----------LRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEE 114 (510)
T ss_dssp HTCE-EEEEEECTTE----------EEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC----------------
T ss_pred CcEE-EEEEEECCCC----------CccceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccc
Confidence 4774 4567777765 678999999999999999999999865420
Q ss_pred --E--------EEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 124 --W--------IRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 124 --w--------irI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
. ....+++||+|.||||+.||+..+.+..+.++-+|
T Consensus 115 ~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~ 160 (510)
T 3c3v_A 115 DQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLT 160 (510)
T ss_dssp ----CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred ccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEe
Confidence 0 01479999999999999999998777788888887
No 71
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.16 E-value=4.6e-06 Score=78.92 Aligned_cols=58 Identities=16% Similarity=0.398 Sum_probs=48.1
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCcccccc-CCCCcEEEE
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL-DTDNYIKVI 156 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l-~~~~~vkA~ 156 (250)
...|.|..+|++||++|+|.|..- +++ ++.+++||+|++|+|..|.... ..+..+..+
T Consensus 136 ~~~HrH~~~ev~~IleG~G~~t~v--~G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l 194 (394)
T 3bu7_A 136 AGAHRHAASALRFIMEGSGAYTIV--DGH--KVELGANDFVLTPNGTWHEHGILESGTECIWQ 194 (394)
T ss_dssp CCCEEESSCEEEEEEECSCEEEEE--TTE--EEEECTTCEEEECTTCCEEEEECTTCCCEEEE
T ss_pred cCCccCCcceEEEEEEeeEEEEEE--CCE--EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEE
Confidence 678999999999999999977332 354 5789999999999999999988 666566655
No 72
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.16 E-value=5.6e-06 Score=78.35 Aligned_cols=76 Identities=12% Similarity=0.165 Sum_probs=63.2
Q ss_pred eeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCE------EEeCCCCccccc
Q 025650 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGM------IVLPAGCYHRFT 146 (250)
Q Consensus 73 ~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDL------I~VPAG~~HrF~ 146 (250)
..-.+++.|+. +...|.|..+|+.||++|+|...+-+.+++. ...+++||+ +.||+|+.||+.
T Consensus 53 s~~~~~l~pgg----------~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~-~~~l~~GDv~~~~~~~~iP~G~~h~~~ 121 (397)
T 2phl_A 53 RLVEFRSKPET----------LLLPQQADAELLLVVRSGSAILVLVKPDDRR-EYFFLTSDNPIFSDHQKIPAGTIFYLV 121 (397)
T ss_dssp EEEEEEECSSE----------EEEEEEESEEEEEEEEESEEEEEEEETTTEE-EEEEEESSCTTSCSEEEECTTCEEEEE
T ss_pred EEEEEEECCCc----------CccCEecCCCeEEEEEeeeEEEEEEeCCCcE-EEEECCCCcccccceEEECCCCcEEEE
Confidence 45677888775 5578889889999999999999998777664 578999999 999999999997
Q ss_pred cCC-CCcEEEEEee
Q 025650 147 LDT-DNYIKVIPFG 159 (250)
Q Consensus 147 l~~-~~~vkA~RlF 159 (250)
... +..+.++-+|
T Consensus 122 N~g~~~~l~~i~~~ 135 (397)
T 2phl_A 122 NPDPKEDLRIIQLA 135 (397)
T ss_dssp ECCSSCCEEEEEEE
T ss_pred eCCCCCCeEEEEee
Confidence 544 5678888777
No 73
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.16 E-value=2.4e-06 Score=78.85 Aligned_cols=59 Identities=24% Similarity=0.373 Sum_probs=48.7
Q ss_pred ccccccCcceEEEEEeceEEE-EEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEe
Q 025650 95 FEEHLHTDEEIRYCVAGSGYF-DVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPF 158 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~F-dvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~Rl 158 (250)
...|.|..+|++||++|+|.| .+ +++ ++.+++||+|++|+|+.|++...++..+..+-+
T Consensus 113 ~~~H~H~~~e~~yVl~G~g~~t~v---~g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v 172 (354)
T 2d40_A 113 APSHRHNQSALRFIVEGKGAFTAV---DGE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDG 172 (354)
T ss_dssp EEEEEESSCEEEEEEECSSCEEEE---TTE--EEECCTTCEEEECTTSCEEEECCSSSCEEEEEE
T ss_pred cCCeecCcceEEEEEEEEEEEEEE---CCE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 568999999999999999988 55 344 478999999999999999998866555665544
No 74
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.15 E-value=4.6e-06 Score=72.74 Aligned_cols=57 Identities=23% Similarity=0.258 Sum_probs=44.9
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCC-CcEEEE
Q 025650 95 FEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD-NYIKVI 156 (250)
Q Consensus 95 ~~EH~H~-ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~-~~vkA~ 156 (250)
..+|.|. .+|+.||++|++.+.+. +++ +.+++||.|.+|+|+.|++....+ ..++.+
T Consensus 192 ~~~h~H~~~~E~~~Vl~G~~~~~i~---~~~--~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l 250 (261)
T 1rc6_A 192 HGYIETHVQEHGAYILSGQGVYNLD---NNW--IPVKKGDYIFMGAYSLQAGYGVGRGEAFSYI 250 (261)
T ss_dssp BEEEEEESSCEEEEEEESEEEEESS---SCE--EEEETTCEEEECSSEEEEEEEC----CEEEE
T ss_pred cCcccCCCceEEEEEEEeEEEEEEC---CEE--EEeCCCCEEEECCCCcEEeEeCCCCcCEEEE
Confidence 4578885 68999999999999874 555 679999999999999999987655 555544
No 75
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.11 E-value=2.3e-06 Score=68.89 Aligned_cols=47 Identities=19% Similarity=0.249 Sum_probs=39.1
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccC
Q 025650 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (250)
Q Consensus 96 ~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~ 148 (250)
.+|. ..+|+.||++|++.+.+. ++. +.+++||.|.+|+|+.|++...
T Consensus 70 ~~h~-~~~E~~~VLeG~~~l~~~---g~~--~~l~~GD~i~~p~g~~h~~~~~ 116 (133)
T 2pyt_A 70 PWTL-NYDEIDMVLEGELHVRHE---GET--MIAKAGDVMFIPKGSSIEFGTP 116 (133)
T ss_dssp EEEC-SSEEEEEEEEEEEEEEET---TEE--EEEETTCEEEECTTCEEEEEEE
T ss_pred cccC-CCCEEEEEEECEEEEEEC---CEE--EEECCCcEEEECCCCEEEEEeC
Confidence 3553 479999999999998884 443 5899999999999999999853
No 76
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.08 E-value=1.5e-05 Score=69.39 Aligned_cols=69 Identities=19% Similarity=0.296 Sum_probs=53.9
Q ss_pred eeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcE
Q 025650 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (250)
Q Consensus 74 ~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~v 153 (250)
.-++++.|+. ..-..|+|..+|..|||+|++.|.+ +|+| +.+++||.|.+++|..|+|....+..+
T Consensus 167 ~~~~tl~PG~---------~~~~~~~h~~ee~~~vLeG~~~~~~---~~~~--~~l~~GD~~~~~~~~pH~~~n~g~~~~ 232 (246)
T 1sfn_A 167 VSTMSFAPGA---------SLPYAEVHYMEHGLLMLEGEGLYKL---EENY--YPVTAGDIIWMGAHCPQWYGALGRNWS 232 (246)
T ss_dssp EEEEEECTTC---------BCSSCBCCSSCEEEEEEECEEEEEE---TTEE--EEEETTCEEEECTTCCEEEEEESSSCE
T ss_pred EEEEEECCCC---------ccCcccCCCceEEEEEEECEEEEEE---CCEE--EEcCCCCEEEECCCCCEEEEcCCCCCE
Confidence 4567777764 1112367889999999999999988 4777 479999999999999999998666556
Q ss_pred EEE
Q 025650 154 KVI 156 (250)
Q Consensus 154 kA~ 156 (250)
+.+
T Consensus 233 ~yl 235 (246)
T 1sfn_A 233 KYL 235 (246)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 77
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.07 E-value=1.5e-05 Score=78.27 Aligned_cols=66 Identities=14% Similarity=0.292 Sum_probs=53.7
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 93 ~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d-~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
.....|.|+. +|+.||++|++.+.+-+.++ +.+...+++||+++||+|+.|....+ ++.+..+-|.
T Consensus 405 gm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~~~ag-~e~l~flaF~ 472 (531)
T 3fz3_A 405 GIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQAG-NQGFEYFAFK 472 (531)
T ss_dssp CEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEEEE
T ss_pred ccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEEEecC-CCCEEEEEEe
Confidence 3578999996 89999999999999987654 57788999999999999999976655 4455555343
No 78
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.07 E-value=4.8e-06 Score=72.02 Aligned_cols=56 Identities=21% Similarity=0.187 Sum_probs=46.0
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEE-EeCCCCccccccCCCCcEE
Q 025650 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI-VLPAGCYHRFTLDTDNYIK 154 (250)
Q Consensus 94 F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI-~VPAG~~HrF~l~~~~~vk 154 (250)
...+|.|+.+|+.||++|++.+.+. |+ ...+++||.| ++|+|+.|++...++....
T Consensus 46 ~~~~H~H~~~e~~~Vl~G~~~~~~~---~~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~ 102 (243)
T 3h7j_A 46 NVEPHQHKEVQIGMVVSGELMMTVG---DV--TRKMTALESAYIAPPHVPHGARNDTDQEVI 102 (243)
T ss_dssp EEEEECCSSEEEEEEEESEEEEEET---TE--EEEEETTTCEEEECTTCCEEEEECSSSCEE
T ss_pred ccCCEECCCcEEEEEEEeEEEEEEC---CE--EEEECCCCEEEEcCCCCcEeeEeCCCCcEE
Confidence 3579999999999999999999883 44 3579999999 5999999999876553333
No 79
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.07 E-value=4.8e-06 Score=78.84 Aligned_cols=59 Identities=24% Similarity=0.293 Sum_probs=47.7
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCC-CCcEEEEEe
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DNYIKVIPF 158 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~-~~~vkA~Rl 158 (250)
-..|.|..+|++||++|+|++.+. |+ ++.+++||+|++|+|..|.+.... +..+..+.+
T Consensus 307 ~~~HrH~~~~v~~VleG~G~~~V~---ge--~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i 366 (394)
T 3bu7_A 307 TKAHRHTGNVIYNVAKGQGYSIVG---GK--RFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSF 366 (394)
T ss_dssp CCCEEESSCEEEEEEECCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECCSSCCEEEEEE
T ss_pred CCCcccCCcEEEEEEeCeEEEEEC---CE--EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEe
Confidence 567999999999999999988873 44 578999999999999999998754 344443333
No 80
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.04 E-value=9.3e-06 Score=63.52 Aligned_cols=49 Identities=12% Similarity=0.292 Sum_probs=42.9
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCC
Q 025650 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 96 ~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
..|.|+.-|+.||++|+|.+.+. ++ ...+++||++++|+|+.|.+...+
T Consensus 32 ~p~~h~~~~i~~v~~G~~~~~i~---~~--~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 32 RPLGMKGYILNLTIRGQGVVKNQ---GR--EFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp ETTCCSSEEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEEECT
T ss_pred cccCCCceEEEEEEEeEEEEEEC---CE--EEEecCCeEEEEcCCCCEEEEeCC
Confidence 47899999999999999999984 44 367999999999999999988754
No 81
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.01 E-value=1.9e-05 Score=66.75 Aligned_cols=52 Identities=12% Similarity=0.005 Sum_probs=44.3
Q ss_pred ccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcE
Q 025650 97 EHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (250)
Q Consensus 97 EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~v 153 (250)
+|.|..+|++||++|++.+.+. ++ ...+++||.+.+|+|..|+|....+.-.
T Consensus 105 ~~~h~gEE~~yVLeG~v~vtl~---g~--~~~L~~Gds~~iP~g~~H~~~N~~d~~A 156 (166)
T 2vpv_A 105 SNSFRTYITFHVIQGIVEVTVC---KN--KFLSVKGSTFQIPAFNEYAIANRGNDEA 156 (166)
T ss_dssp EECCSEEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCEEEEEECSSSCE
T ss_pred ccCCCceEEEEEEEeEEEEEEC---CE--EEEEcCCCEEEECCCCCEEEEECCCCCE
Confidence 4778889999999999999985 44 3679999999999999999998666443
No 82
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.00 E-value=8.4e-06 Score=74.76 Aligned_cols=53 Identities=9% Similarity=0.089 Sum_probs=45.6
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCC
Q 025650 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (250)
Q Consensus 94 F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~ 150 (250)
...+|+|+.||+++|++|++.+.+.+. + ...+++||.|+||||+.|.|...+.
T Consensus 264 ~~~~h~~~~~~~~~vleG~~~i~i~g~--~--~~~l~~Gd~~~iPag~~h~~~~~~~ 316 (350)
T 1juh_A 264 TVPTWSFPGACAFQVQEGRVVVQIGDY--A--ATELGSGDVAFIPGGVEFKYYSEAY 316 (350)
T ss_dssp CCCCBCCSSCEEEEEEESCEEEEETTS--C--CEEECTTCEEEECTTCCEEEEESSS
T ss_pred CCCcccCCCcEEEEEEeeEEEEEECCe--E--EEEeCCCCEEEECCCCCEEEEecCC
Confidence 456899999999999999999999631 3 3689999999999999999998754
No 83
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=97.99 E-value=1.3e-05 Score=78.16 Aligned_cols=80 Identities=14% Similarity=0.230 Sum_probs=61.7
Q ss_pred cCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCC-CeEE--------------------EE
Q 025650 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRN-EKWI--------------------RI 127 (250)
Q Consensus 69 rGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~-d~wi--------------------rI 127 (250)
.|.. .=.++|.|+. +...|.|.-.|+.||++|+|++.+-..+ .+.+ .-
T Consensus 44 ~gvs-~~R~~i~pgg----------l~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~ 112 (496)
T 3ksc_A 44 AGVA-LSRATLQRNA----------LRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVN 112 (496)
T ss_dssp HTCE-EEEEEECTTE----------EEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEE
T ss_pred CCce-EEEEEecCCC----------EeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheee
Confidence 4653 4556677664 7789999779999999999999996543 1221 12
Q ss_pred EEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 128 WVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 128 ~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
.+++||+|+||+|+.||...+.+..+.++-+|
T Consensus 113 ~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~ 144 (496)
T 3ksc_A 113 RFREGDIIAVPTGIVFWMYNDQDTPVIAVSLT 144 (496)
T ss_dssp EECTTEEEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred ccCCCCEEEECCCCcEEEEcCCCCCEEEEEEe
Confidence 78999999999999999988777778877656
No 84
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=97.99 E-value=9.5e-06 Score=72.30 Aligned_cols=54 Identities=17% Similarity=0.258 Sum_probs=45.1
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEE
Q 025650 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (250)
Q Consensus 96 ~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vk 154 (250)
.+|.|..+|+.||++|++.+.+. |+ ...+++||.|.+|+|+.|++....+..++
T Consensus 84 ~~h~H~~eE~~~Vl~G~l~v~v~---g~--~~~L~~GD~i~ip~~~~H~~~N~g~~~~~ 137 (278)
T 1sq4_A 84 PEQDPNAEAVLFVVEGELSLTLQ---GQ--VHAMQPGGYAFIPPGADYKVRNTTGQHTR 137 (278)
T ss_dssp CCCCTTEEEEEEEEESCEEEEES---SC--EEEECTTEEEEECTTCCEEEECCSSSCEE
T ss_pred CCcCCCceEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEECCCCCEE
Confidence 46889899999999999999885 34 36899999999999999999876544444
No 85
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=97.95 E-value=1.9e-05 Score=66.89 Aligned_cols=71 Identities=18% Similarity=0.229 Sum_probs=54.0
Q ss_pred eeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcE
Q 025650 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (250)
Q Consensus 74 ~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~v 153 (250)
.=++++.|+. .-..|.|..+|..||++|++.+.+.+ +++ ..+++||.| +|+|+.|++....+...
T Consensus 81 ~~~v~l~PG~----------~~~~H~H~~eE~~~VLeGel~l~ld~--ge~--~~L~~GDsi-~~~g~~H~~~N~g~~~a 145 (172)
T 3es1_A 81 IRVVDMLPGK----------ESPMHRTNSIDYGIVLEGEIELELDD--GAK--RTVRQGGII-VQRGTNHLWRNTTDKPC 145 (172)
T ss_dssp EEEEEECTTC----------BCCCBCCSEEEEEEEEESCEEEECGG--GCE--EEECTTCEE-EECSCCBEEECCSSSCE
T ss_pred EEEEEECCCC----------CCCCeecCceEEEEEEeCEEEEEECC--CeE--EEECCCCEE-EeCCCcEEEEeCCCCCE
Confidence 3456677764 13589999999999999999998742 343 579999999 99999999987666556
Q ss_pred EEEEee
Q 025650 154 KVIPFG 159 (250)
Q Consensus 154 kA~RlF 159 (250)
+.+-++
T Consensus 146 r~l~V~ 151 (172)
T 3es1_A 146 RIAFIL 151 (172)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555444
No 86
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=97.95 E-value=2.3e-05 Score=69.84 Aligned_cols=69 Identities=17% Similarity=0.289 Sum_probs=53.7
Q ss_pred eeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcE
Q 025650 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (250)
Q Consensus 74 ~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~v 153 (250)
.-++++.|+. ..-..|+|..+|..|||+|+|.|.+ +++| +.+++||.|.+++|..|+|....+..+
T Consensus 193 ~~~~~l~pG~---------~i~~~~~h~~e~~~~il~G~~~~~~---~~~~--~~v~~GD~~~~~~~~~h~~~n~g~~~~ 258 (278)
T 1sq4_A 193 VNIVNFEPGG---------VIPFAETHVMEHGLYVLEGKAVYRL---NQDW--VEVEAGDFMWLRAFCPQACYSGGPGRF 258 (278)
T ss_dssp EEEEEECSSS---------EESCCCCCSEEEEEEEEECEEEEEE---TTEE--EEEETTCEEEEEESCCEEEECCSSSCE
T ss_pred EEEEEECCCC---------CcCCCCCCCccEEEEEEeCEEEEEE---CCEE--EEeCCCCEEEECCCCCEEEEcCCCCCE
Confidence 3567777774 1112355888999999999999987 4777 569999999999999999998666556
Q ss_pred EEE
Q 025650 154 KVI 156 (250)
Q Consensus 154 kA~ 156 (250)
..+
T Consensus 259 ~yl 261 (278)
T 1sq4_A 259 RYL 261 (278)
T ss_dssp EEE
T ss_pred EEE
Confidence 644
No 87
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=97.90 E-value=5.3e-05 Score=71.68 Aligned_cols=65 Identities=18% Similarity=0.228 Sum_probs=55.3
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeC------CC-eEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDR------NE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 93 ~F~~EH~H~d-dEIr~IleGsG~Fdvrd~------~d-~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
.....|.|+. .|+.||++|+|++.+-+. ++ +.+...+++||+++||+|..|+-...+ .+..+-|+
T Consensus 250 ~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~ 322 (397)
T 2phl_A 250 ALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFG 322 (397)
T ss_dssp EEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEE
T ss_pred cEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEE
Confidence 4578899986 899999999999999876 34 688899999999999999999988775 46666666
No 88
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=97.89 E-value=5.2e-05 Score=71.71 Aligned_cols=65 Identities=15% Similarity=0.262 Sum_probs=53.4
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC--------------eEEEEEEecCCEEEeCCCCccccccCCCCcEEEEE
Q 025650 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE--------------KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIP 157 (250)
Q Consensus 93 ~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d--------------~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~R 157 (250)
.....|.|+. .|+.||++|+|++.+-+.++ +.+.-.+++||+++||+|..|+-... + .+..+-
T Consensus 260 ~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~-~-~~~~l~ 337 (416)
T 1uij_A 260 ALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT-S-NLNFLA 337 (416)
T ss_dssp EEEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEES-S-SEEEEE
T ss_pred cEecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC-C-CeEEEE
Confidence 3578999996 89999999999999987655 35555899999999999999998877 3 466666
Q ss_pred ee
Q 025650 158 FG 159 (250)
Q Consensus 158 lF 159 (250)
+|
T Consensus 338 f~ 339 (416)
T 1uij_A 338 FG 339 (416)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 89
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=97.85 E-value=0.0001 Score=71.74 Aligned_cols=82 Identities=16% Similarity=0.191 Sum_probs=63.7
Q ss_pred EEECCCCCCChHHH----------HhccccccccCc-ceEEEEEeceEEEEEEeCC-CeEEEEEEecCCEEEeCCCCccc
Q 025650 77 CEVCPEKLPNYEEK----------IKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWVKKGGMIVLPAGCYHR 144 (250)
Q Consensus 77 i~l~p~~~Pn~e~k----------l~~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~-d~wirI~~e~GDLI~VPAG~~Hr 144 (250)
..++...+|.+..+ .......|.|+. .|+.||++|+++..+-+.+ .+.+.-.+++||+++||+|..|.
T Consensus 343 ~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~ 422 (496)
T 3ksc_A 343 KTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVA 422 (496)
T ss_dssp EEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEE
T ss_pred EEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEEE
Confidence 34555667766553 235688999987 7999999999999998765 45667789999999999999996
Q ss_pred cccCCCCcEEEEEee
Q 025650 145 FTLDTDNYIKVIPFG 159 (250)
Q Consensus 145 F~l~~~~~vkA~RlF 159 (250)
-..+ +..+..+-+|
T Consensus 423 ~~a~-~e~~~~l~f~ 436 (496)
T 3ksc_A 423 AKSL-SDRFSYVAFK 436 (496)
T ss_dssp EEEC-SSEEEEEEEE
T ss_pred EEeC-CCCEEEEEEE
Confidence 6555 4557777777
No 90
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=97.85 E-value=5.8e-05 Score=72.60 Aligned_cols=83 Identities=14% Similarity=0.193 Sum_probs=63.4
Q ss_pred EEEECCCCCCChHHH----------HhccccccccCc-ceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEeCCCCcc
Q 025650 76 FCEVCPEKLPNYEEK----------IKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYH 143 (250)
Q Consensus 76 vi~l~p~~~Pn~e~k----------l~~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d-~wirI~~e~GDLI~VPAG~~H 143 (250)
+..++...+|.+..+ .......|.|.. .|+.||++|+|...+-+.++ +.+.-.+++||+++||+|..|
T Consensus 306 v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H 385 (459)
T 2e9q_A 306 ISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVV 385 (459)
T ss_dssp EEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEE
Confidence 456666667765422 124578999996 79999999999999987654 455556999999999999999
Q ss_pred ccccCCCCcEEEEEee
Q 025650 144 RFTLDTDNYIKVIPFG 159 (250)
Q Consensus 144 rF~l~~~~~vkA~RlF 159 (250)
+-..++ ..+..+-+|
T Consensus 386 ~~~ng~-~~~~~l~~~ 400 (459)
T 2e9q_A 386 IKRASD-RGFEWIAFK 400 (459)
T ss_dssp EEEEEE-EEEEEEEEE
T ss_pred EEEeCC-CCeEEEEEe
Confidence 987754 457777677
No 91
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=97.84 E-value=6.5e-05 Score=72.63 Aligned_cols=83 Identities=14% Similarity=0.207 Sum_probs=64.9
Q ss_pred EEEECCCCCCChHHH----------HhccccccccCc-ceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEeCCCCcc
Q 025650 76 FCEVCPEKLPNYEEK----------IKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYH 143 (250)
Q Consensus 76 vi~l~p~~~Pn~e~k----------l~~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d-~wirI~~e~GDLI~VPAG~~H 143 (250)
+..++...+|.+..+ .......|.|+. .|+.||++|+++..+-+.++ +.+.-.+++||+++||+|..|
T Consensus 307 v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H 386 (466)
T 3kgl_A 307 ISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSV 386 (466)
T ss_dssp EEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeE
Confidence 455666677765422 124578999986 79999999999999987754 567778999999999999999
Q ss_pred ccccCCCCcEEEEEee
Q 025650 144 RFTLDTDNYIKVIPFG 159 (250)
Q Consensus 144 rF~l~~~~~vkA~RlF 159 (250)
.-.++. ..+.++-+|
T Consensus 387 ~~~ag~-e~~~~l~~f 401 (466)
T 3kgl_A 387 VKRATS-EQFRWIEFK 401 (466)
T ss_dssp EEEECS-SEEEEEEEE
T ss_pred EEEcCC-CCEEEEEEE
Confidence 876654 458888777
No 92
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=97.80 E-value=5.5e-05 Score=72.00 Aligned_cols=75 Identities=16% Similarity=0.244 Sum_probs=57.2
Q ss_pred cCCCeeeEEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCcccccc
Q 025650 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 147 (250)
Q Consensus 69 rGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l 147 (250)
.+|.- -.+++.|+. ++..| |.+ +|+.||++|+|+..+-+.++.. ...+++||++++|+|+.||...
T Consensus 42 ~~~~l-~~~~l~p~g----------l~~Ph-h~~A~ei~yV~~G~g~~g~V~~~~~~-~~~l~~GDv~~~P~G~~h~~~N 108 (418)
T 3s7i_A 42 QNHRI-VQIEAKPNT----------LVLPK-HADADNILVIQQGQATVTVANGNNRK-SFNLDEGHALRIPSGFISYILN 108 (418)
T ss_dssp TTCEE-EEEEECTTE----------EEEEE-EESEEEEEEEEESEEEEEEECSSCEE-EEEEETTEEEEECTTCEEEEEE
T ss_pred cceEE-EEEEecCCc----------eeeee-eCCCCeEEEEEEeeEEEEEEecCCEE-EEEecCCCEEEECCCCeEEEEe
Confidence 46654 366777654 77788 765 9999999999999998765544 5789999999999999999876
Q ss_pred -CCCCcEEEE
Q 025650 148 -DTDNYIKVI 156 (250)
Q Consensus 148 -~~~~~vkA~ 156 (250)
+++..+..+
T Consensus 109 ~g~~~~l~i~ 118 (418)
T 3s7i_A 109 RHDNQNLRVA 118 (418)
T ss_dssp CCSSCCEEEE
T ss_pred cCCCccEEEE
Confidence 444444433
No 93
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=97.80 E-value=1.4e-05 Score=60.74 Aligned_cols=71 Identities=14% Similarity=0.044 Sum_probs=53.0
Q ss_pred EEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEE
Q 025650 76 FCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (250)
Q Consensus 76 vi~l~p~~~Pn~e~kl~~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vk 154 (250)
.+++.|+. -..+|.|.. .|+++|++|++.+.. .|++...+.+++||.+.+|+|+.|+.....+..+.
T Consensus 21 r~~i~PG~----------~~~~H~H~~~~e~~~v~~G~~~v~~--~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~ 88 (98)
T 3lag_A 21 EWRLPPGS----------ATGHHTHGMDYVVVPMADGEMTIVA--PDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIV 88 (98)
T ss_dssp EEEECTTE----------ECCSEECCSCEEEEESSCBC-CEEC--TTSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEE
T ss_pred EEEECCCC----------ccCcEECCCcEEEEEEeccEEEEEe--CCCceEEEEecCCcEEEEcCCCcEECEECCCCeEE
Confidence 46677763 345999986 578888899998755 34444456789999999999999999977776677
Q ss_pred EEEe
Q 025650 155 VIPF 158 (250)
Q Consensus 155 A~Rl 158 (250)
.+.+
T Consensus 89 ~IeV 92 (98)
T 3lag_A 89 FLEI 92 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 94
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=97.79 E-value=6.7e-05 Score=71.40 Aligned_cols=64 Identities=16% Similarity=0.360 Sum_probs=52.2
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCCC-------------------------eEEEEEEecCCEEEeCCCCcccccc
Q 025650 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-------------------------KWIRIWVKKGGMIVLPAGCYHRFTL 147 (250)
Q Consensus 94 F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d-------------------------~wirI~~e~GDLI~VPAG~~HrF~l 147 (250)
....|.|+. .|+.||++|+|++.+-+.++ +.+.-.+++||+++||+|..||...
T Consensus 275 ~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~ 354 (418)
T 3s7i_A 275 LMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINA 354 (418)
T ss_dssp EEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEE
T ss_pred eeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEEC
Confidence 578899975 89999999999999986543 4667889999999999999999877
Q ss_pred CCCCcEEEEEee
Q 025650 148 DTDNYIKVIPFG 159 (250)
Q Consensus 148 ~~~~~vkA~RlF 159 (250)
++ + +..+-|+
T Consensus 355 ~~-~-l~~v~f~ 364 (418)
T 3s7i_A 355 SS-E-LHLLGFG 364 (418)
T ss_dssp SS-C-EEEEEEE
T ss_pred CC-C-EEEEEEE
Confidence 65 3 6555454
No 95
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=97.77 E-value=8.4e-05 Score=63.24 Aligned_cols=62 Identities=13% Similarity=0.132 Sum_probs=48.1
Q ss_pred eEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEE
Q 025650 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (250)
Q Consensus 75 Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vk 154 (250)
-++.+.|+. .+..|.|...|+.|||+|+ |. |.++ .+.+||++.+|+|..|.+..+....+.
T Consensus 128 ~l~~~~pG~----------~~p~H~H~g~E~~~VL~G~--f~--de~~-----~~~~Gd~~~~p~g~~H~p~a~~~~gc~ 188 (195)
T 2q1z_B 128 RLLWIPGGQ----------AVPDHGHRGLELTLVLQGA--FR--DETD-----RFGAGDIEIADQELEHTPVAERGLDCI 188 (195)
T ss_dssp EEEEECTTC----------BCCCCCCSSCEEEEEEESE--EE--CSSS-----EEETTCEEEECSSCCCCCEECSSSCEE
T ss_pred EEEEECCCC----------CCCCcCCCCeEEEEEEEEE--EE--CCcE-----EECCCeEEEeCcCCccCCEeCCCCCEE
Confidence 466676664 5779999999999999998 32 3332 588999999999999999986444455
Q ss_pred E
Q 025650 155 V 155 (250)
Q Consensus 155 A 155 (250)
+
T Consensus 189 ~ 189 (195)
T 2q1z_B 189 C 189 (195)
T ss_dssp E
T ss_pred E
Confidence 3
No 96
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=97.75 E-value=2.2e-05 Score=72.40 Aligned_cols=57 Identities=19% Similarity=0.188 Sum_probs=46.0
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 96 ~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
..|.|...|++||++|+|++.|. ++ ++.+++||+++||++..|.+..++ ....+++.
T Consensus 282 ~~H~h~~~ev~~v~~G~g~~~v~---~~--~~~~~~GD~~~vP~~~~H~~~n~e--~~~l~~~~ 338 (354)
T 2d40_A 282 RVARTTDSTIYHVVEGSGQVIIG---NE--TFSFSAKDIFVVPTWHGVSFQTTQ--DSVLFSFS 338 (354)
T ss_dssp CCBEESSCEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCCEEEEEEE--EEEEEEEE
T ss_pred CceecCCcEEEEEEeCeEEEEEC---CE--EEEEcCCCEEEECCCCeEEEEeCC--CEEEEEEc
Confidence 46999888999999999999993 43 578999999999999999998752 34444444
No 97
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=97.72 E-value=0.00013 Score=70.47 Aligned_cols=83 Identities=17% Similarity=0.312 Sum_probs=65.0
Q ss_pred EEEECCCCCCChHHH-H---------hccccccccCc-ceEEEEEeceEEEEEEeCC-CeEEEEEEecCCEEEeCCCCcc
Q 025650 76 FCEVCPEKLPNYEEK-I---------KNFFEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWVKKGGMIVLPAGCYH 143 (250)
Q Consensus 76 vi~l~p~~~Pn~e~k-l---------~~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~-d~wirI~~e~GDLI~VPAG~~H 143 (250)
+..++...+|.+..+ + ......|.|+. .|+.||++|+++..+-+.+ .+.+.-.+++||+++||+|..|
T Consensus 307 v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h 386 (465)
T 3qac_A 307 LTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAI 386 (465)
T ss_dssp EEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEE
Confidence 455677777876553 1 24578899986 7999999999999998765 4577778999999999999999
Q ss_pred ccccCCCCcEEEEEee
Q 025650 144 RFTLDTDNYIKVIPFG 159 (250)
Q Consensus 144 rF~l~~~~~vkA~RlF 159 (250)
.-.++. ..+..+-+|
T Consensus 387 ~~~ag~-e~~~~l~f~ 401 (465)
T 3qac_A 387 VKQAFE-DGFEWVSFK 401 (465)
T ss_dssp EEEEEE-EEEEEEEEE
T ss_pred EEEcCC-CCeEEEEEe
Confidence 876664 457777676
No 98
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=97.71 E-value=2.5e-05 Score=59.83 Aligned_cols=62 Identities=15% Similarity=0.086 Sum_probs=45.1
Q ss_pred ccccccCcc-eEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEe
Q 025650 95 FEEHLHTDE-EIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPF 158 (250)
Q Consensus 95 ~~EH~H~dd-EIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~Rl 158 (250)
..||.|..+ ++.++++|++.+... |++...+.+++||.+.+|+|..|++....+..+..+-+
T Consensus 30 ~~~H~H~~~~~iv~v~~G~~~~~~~--dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~v 92 (98)
T 2ozi_A 30 TGHHTHGMDYVVVPMADGEMTIVAP--DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp CCSEECCSCEEEEESSCBC-CEECT--TSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cCcEeCCCCEEEEEEeeEEEEEEeC--CCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEE
Confidence 469999876 444556777776553 55433468999999999999999999877666665543
No 99
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=97.67 E-value=0.00012 Score=69.76 Aligned_cols=65 Identities=14% Similarity=0.237 Sum_probs=52.8
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC-------------eEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEe
Q 025650 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-------------KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPF 158 (250)
Q Consensus 93 ~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d-------------~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~Rl 158 (250)
.....|.|+. .|+.||++|+|++.+-+.++ +.+.-.+++||+++||+|..|+-...+ .+..+-|
T Consensus 277 ~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~~--~~~~v~f 354 (434)
T 2ea7_A 277 ALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINATS--NLNFFAF 354 (434)
T ss_dssp EEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEESS--SEEEEEE
T ss_pred eeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcCC--CeEEEEE
Confidence 3478999996 89999999999999986543 155558999999999999999988773 4666666
Q ss_pred e
Q 025650 159 G 159 (250)
Q Consensus 159 F 159 (250)
+
T Consensus 355 ~ 355 (434)
T 2ea7_A 355 G 355 (434)
T ss_dssp E
T ss_pred E
Confidence 6
No 100
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=97.67 E-value=9.7e-05 Score=71.46 Aligned_cols=78 Identities=12% Similarity=0.188 Sum_probs=60.8
Q ss_pred CCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCe--------------------------
Q 025650 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-------------------------- 123 (250)
Q Consensus 70 GY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~-------------------------- 123 (250)
||. .=.+++.|+. +...|.|+-.|+.||++|+|++.+-..+..
T Consensus 42 gvs-~~r~~i~p~G----------l~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~~~~~~ 110 (466)
T 3kgl_A 42 GVS-FVRYIIESKG----------LYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQGQGQQ 110 (466)
T ss_dssp TEE-EEEEEECTTE----------EEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC-------------
T ss_pred CeE-EEEEEECCCC----------EeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhhcccccccccccccccccccccc
Confidence 774 3556677654 788999999999999999999998644110
Q ss_pred ----------------------------------EEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 124 ----------------------------------WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 124 ----------------------------------wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
-+ ..+++||+|.||||+.||...+.+..+.++-++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv-~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~ 179 (466)
T 3kgl_A 111 GQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKV-EHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVL 179 (466)
T ss_dssp ----------------------------CCEEESCE-EEEETTEEEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccceee-ccccCCCEEEECCCCcEEEEeCCCCcEEEEEEE
Confidence 11 378999999999999999998777677776555
No 101
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=97.60 E-value=3e-05 Score=62.87 Aligned_cols=72 Identities=11% Similarity=-0.093 Sum_probs=51.3
Q ss_pred eeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcE
Q 025650 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (250)
Q Consensus 74 ~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~v 153 (250)
.-++++.|+. -+..|.|..+|..|||+|+..+...+..+ ...+++||++.+|+|..|.+....+. .
T Consensus 46 ~~~~~~~pG~----------~~p~H~H~~~ee~~VL~G~~~~~~g~~~~---~~~~~~Gd~~~~p~g~~H~p~~~~e~-~ 111 (145)
T 2o1q_A 46 TAIFDCPAGS----------SFAAHVHVGPGEYFLTKGKMDVRGGKAAG---GDTAIAPGYGYESANARHDKTEFPVA-S 111 (145)
T ss_dssp EEEEEECTTE----------EECCEEESSCEEEEEEEEEEEETTCGGGT---SEEEESSEEEEECTTCEESCCEEEEE-E
T ss_pred EEEEEECCCC----------CCCccCCCCCEEEEEEEeEEEEcCCCEec---ceEeCCCEEEEECcCCccCCeECCCC-e
Confidence 4678888774 45699999888899999998864322111 15789999999999999995443333 4
Q ss_pred EEEEee
Q 025650 154 KVIPFG 159 (250)
Q Consensus 154 kA~RlF 159 (250)
..+-.|
T Consensus 112 ~~l~~~ 117 (145)
T 2o1q_A 112 EFYMSF 117 (145)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 444456
No 102
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=97.56 E-value=0.0001 Score=64.14 Aligned_cols=52 Identities=17% Similarity=0.262 Sum_probs=41.7
Q ss_pred cCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEE
Q 025650 100 HTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVI 156 (250)
Q Consensus 100 H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~ 156 (250)
|..+|+.||++|++.+.+. ++. ..+++||.+.+|+|+.|+|....+...+.+
T Consensus 79 ~~~ee~~~Vl~G~l~~~~~---~~~--~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l 130 (261)
T 1rc6_A 79 EGIETFLYVISGNITAKAE---GKT--FALSEGGYLYCPPGSLMTFVNAQAEDSQIF 130 (261)
T ss_dssp TTEEEEEEEEESEEEEEET---TEE--EEEETTEEEEECTTCCCEEEECSSSCEEEE
T ss_pred CCceEEEEEEEeEEEEEEC---CEE--EEECCCCEEEECCCCCEEEEeCCCCCEEEE
Confidence 3458999999999999884 543 679999999999999999997655444433
No 103
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=97.53 E-value=0.00034 Score=66.91 Aligned_cols=65 Identities=14% Similarity=0.263 Sum_probs=53.1
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC---------e--EEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE---------K--WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 93 ~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d---------~--wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
.....|.|+. .|+.||++|+|+..+-+.++ + .+.-.+++||+++||+|..|+-..+ + .+..+-|+
T Consensus 292 ~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~-~-~~~~v~f~ 368 (445)
T 2cav_A 292 ALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA-S-DLNMVGIG 368 (445)
T ss_dssp EEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCEEEEES-S-SEEEEEEE
T ss_pred ceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC-C-CeEEEEEE
Confidence 4588999986 89999999999999987653 3 5788899999999999999998877 3 36656565
No 104
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=97.52 E-value=9.3e-05 Score=69.60 Aligned_cols=51 Identities=16% Similarity=0.214 Sum_probs=45.0
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCC
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~ 150 (250)
-..|.|...+|++|++|+|+..|. ++ ++..++||.++||++..|++..+++
T Consensus 292 t~~hRht~s~Vy~V~eG~G~~~I~---~~--~~~w~~gD~fvvP~w~~h~~~n~~~ 342 (368)
T 3nw4_A 292 TATRNEVGSTVFQVFEGAGAVVMN---GE--TTKLEKGDMFVVPSWVPWSLQAETQ 342 (368)
T ss_dssp CCCEEESSCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCEEEEESSS
T ss_pred cCCeeccccEEEEEEeCcEEEEEC---CE--EEEecCCCEEEECCCCcEEEEeCCC
Confidence 468999999999999999999884 43 5789999999999999999988743
No 105
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=97.45 E-value=0.00017 Score=63.38 Aligned_cols=50 Identities=8% Similarity=0.049 Sum_probs=40.8
Q ss_pred cCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEE
Q 025650 100 HTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (250)
Q Consensus 100 H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vk 154 (250)
|..+|+.||++|++.+.+. |+. ..+++||.+.+|+|+.|++....+...+
T Consensus 82 ~~~ee~~~Vl~G~l~~~~~---~~~--~~L~~GD~~~~~~~~~H~~~N~~~~~~~ 131 (274)
T 1sef_A 82 DGIQTLVYVIDGRLRVSDG---QET--HELEAGGYAYFTPEMKMYLANAQEADTE 131 (274)
T ss_dssp TTEEEEEEEEESEEEEECS---SCE--EEEETTEEEEECTTSCCEEEESSSSCEE
T ss_pred CCceEEEEEEEeEEEEEEC---CEE--EEECCCCEEEECCCCCEEEEeCCCCCEE
Confidence 3468999999999998884 443 6799999999999999999976554444
No 106
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.43 E-value=0.00023 Score=61.01 Aligned_cols=63 Identities=13% Similarity=0.166 Sum_probs=49.6
Q ss_pred eEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccC
Q 025650 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (250)
Q Consensus 75 Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~ 148 (250)
+++.++... ...|..|.|++-|+.||.+|+|. .+.+.+... ..+++||++++|+|..|.+...
T Consensus 10 ~~~~~~~~~--------~~~~~~~~~~~~~i~~v~~G~~~-~i~~~~~~~--~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 10 NVYRMSKFD--------TYIFNNLYINDYKMFWIDSGIAK-LIDKNCLVS--YEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEEECTTC--------EEEEEEEECSSCEEEEESSSCEE-EEETTTTEE--EEECTTEEEEECTTCEEEEEEE
T ss_pred hhhhhhccc--------chhccHhhhcceEEEEEecCceE-EECCcccee--EEEcCCCEEEEcCCCceeeccc
Confidence 566666553 45578999999999999999999 886221103 5799999999999999998876
No 107
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.42 E-value=0.00025 Score=56.87 Aligned_cols=52 Identities=13% Similarity=0.252 Sum_probs=41.6
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCC
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~ 150 (250)
|.++.+.++|.+|||+|++.+... ++. .+.+++||++++|+|..-..+..+.
T Consensus 54 ~~~~~~~~~E~~~iLeG~~~lt~d--dG~--~~~l~aGD~~~~P~G~~gtWev~e~ 105 (116)
T 3es4_A 54 YNYAGRDLEETFVVVEGEALYSQA--DAD--PVKIGPGSIVSIAKGVPSRLEILSS 105 (116)
T ss_dssp EEECCCSEEEEEEEEECCEEEEET--TCC--CEEECTTEEEEECTTCCEEEEECSC
T ss_pred eECeeCCCcEEEEEEEeEEEEEeC--CCe--EEEECCCCEEEECCCCeEEEEEeEE
Confidence 345666677999999999998764 344 4789999999999999988877653
No 108
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=97.37 E-value=0.00025 Score=63.88 Aligned_cols=70 Identities=10% Similarity=0.020 Sum_probs=52.4
Q ss_pred eEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEE
Q 025650 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (250)
Q Consensus 75 Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vk 154 (250)
=++++.|+. . -..|.|..+|+.||++|++...+. +++. ..+++||.+.+|+|..|++...+...+.
T Consensus 73 ~lv~l~PGg--------~--s~~~~h~~EEfiyVleG~l~l~l~--~g~~--~~L~~Gds~y~p~~~~H~~~N~~~Ar~l 138 (266)
T 4e2q_A 73 YLAKMKEMS--------S--SGLPPQDIERLIFVVEGAVTLTNT--SSSS--KKLTVDSYAYLPPNFHHSLDCVESATLV 138 (266)
T ss_dssp EEEEECSSE--------E--CCCCCTTEEEEEEEEEECEEEEC----CCC--EEECTTEEEEECTTCCCEEEESSCEEEE
T ss_pred EEEEECcCC--------c--CCCCCCCCeEEEEEEEEEEEEEEC--CCcE--EEEcCCCEEEECCCCCEEEEeCCCEEEE
Confidence 367777764 1 245888889999999999998885 1343 5799999999999999999986554444
Q ss_pred EEEe
Q 025650 155 VIPF 158 (250)
Q Consensus 155 A~Rl 158 (250)
.+|-
T Consensus 139 ~V~k 142 (266)
T 4e2q_A 139 VFER 142 (266)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4433
No 109
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=97.33 E-value=0.00033 Score=59.86 Aligned_cols=58 Identities=26% Similarity=0.448 Sum_probs=44.6
Q ss_pred cccccccCc-------ceEEEEEeceEEEEEEeCCC----------------eEEEEEEecCCEEEeCCCCccccccCCC
Q 025650 94 FFEEHLHTD-------EEIRYCVAGSGYFDVRDRNE----------------KWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (250)
Q Consensus 94 F~~EH~H~d-------dEIr~IleGsG~Fdvrd~~d----------------~wirI~~e~GDLI~VPAG~~HrF~l~~~ 150 (250)
...+|.|.. .|-++++.|.+++.+.+..- -+-.|.++|||.+.||+|++|||.++++
T Consensus 65 ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIppg~~H~f~agee 144 (175)
T 2y0o_A 65 TCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKHWFQAGEE 144 (175)
T ss_dssp EEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEECTTCCEEEEEEEE
T ss_pred cCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEECCCCcEEEEeCCC
Confidence 456999975 57777999999998853210 1245789999999999999999998554
Q ss_pred C
Q 025650 151 N 151 (250)
Q Consensus 151 ~ 151 (250)
.
T Consensus 145 g 145 (175)
T 2y0o_A 145 G 145 (175)
T ss_dssp E
T ss_pred C
Confidence 3
No 110
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=97.30 E-value=0.00036 Score=57.95 Aligned_cols=68 Identities=18% Similarity=0.171 Sum_probs=52.1
Q ss_pred CeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccC--C
Q 025650 72 SYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD--T 149 (250)
Q Consensus 72 ~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~--~ 149 (250)
...-++.+.|+. -+..|.|...|..|||+|+..|+ .++ ..+++||++..|+|..|.+... +
T Consensus 42 ~~v~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~~~~~---e~~----~~~~~Gd~~~~P~g~~H~~~~~~~~ 104 (159)
T 3ebr_A 42 ETITLLKAPAGM----------EMPRHHHTGTVIVYTVQGSWRYK---EHD----WVAHAGSVVYETASTRHTPQSAYAE 104 (159)
T ss_dssp EEEEEEEECSSC----------BCCCEEESSCEEEEEEESCEEET---TSS----CCBCTTCEEEECSSEEECEEESSSS
T ss_pred eEEEEEEECCCC----------CcccccCCCCEEEEEEEeEEEEe---CCC----eEECCCeEEEECCCCcceeEeCCCC
Confidence 455778888775 46799999999999999998764 223 2588999999999999998876 3
Q ss_pred CCcEEEE
Q 025650 150 DNYIKVI 156 (250)
Q Consensus 150 ~~~vkA~ 156 (250)
+.....+
T Consensus 105 ~e~~~~~ 111 (159)
T 3ebr_A 105 GPDIITF 111 (159)
T ss_dssp SSCEEEE
T ss_pred CCCEEEE
Confidence 3444433
No 111
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=97.15 E-value=0.00088 Score=65.87 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=27.2
Q ss_pred EEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 127 IWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 127 I~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
..+++||.|.||||+.||...+.+..+.++-++
T Consensus 174 ~~vr~GDviaiPaG~~~w~yN~G~~~l~iv~~~ 206 (531)
T 3fz3_A 174 RRIREGDVVAIPAGVAYWSYNDGDQELVAVNLF 206 (531)
T ss_dssp EEEETTEEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred ecccCCcEEEECCCCeEEEEeCCCceEEEEEEE
Confidence 367999999999999999998877767665443
No 112
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.10 E-value=0.0013 Score=58.45 Aligned_cols=53 Identities=13% Similarity=0.111 Sum_probs=41.8
Q ss_pred cCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEE
Q 025650 100 HTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIP 157 (250)
Q Consensus 100 H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~R 157 (250)
++.||+.|||+|+..... +++ .+.+++||+++||+|+.|++...+.-....++
T Consensus 63 ~p~dE~~~VleG~~~lt~---~g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~ 115 (238)
T 3myx_A 63 YPYTEMLVMHRGSVTLTS---GTD--SVTLSTGESAVIGRGTQVRIDAQPESLWAFCA 115 (238)
T ss_dssp CSSEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECTTEEEEEEE
T ss_pred CCCcEEEEEEEeEEEEEC---CCe--EEEEcCCCEEEECCCCEEEEEecCCeEEEEEe
Confidence 345899999999988765 344 47899999999999999999988764444443
No 113
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=97.04 E-value=0.0008 Score=58.42 Aligned_cols=57 Identities=18% Similarity=0.148 Sum_probs=44.5
Q ss_pred eEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccC
Q 025650 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (250)
Q Consensus 75 Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~ 148 (250)
=.+++.|+.- ...|. .+|+.||++|++.+.+. |+. ..+++||.+.+|+|+.|++...
T Consensus 53 ~~~~l~Pg~~----------~~~~~--~ee~~~Vl~G~~~~~~~---~~~--~~l~~Gd~~~~p~~~~H~~~n~ 109 (246)
T 1sfn_A 53 FTAEMPAGAQ----------ATESV--YQRFAFVLSGEVDVAVG---GET--RTLREYDYVYLPAGEKHMLTAK 109 (246)
T ss_dssp EEEEECTTCE----------EECCS--SEEEEEEEEEEEEEECS---SCE--EEECTTEEEEECTTCCCEEEEE
T ss_pred EEEEECCCCc----------CCCCc--eeEEEEEEECEEEEEEC---CEE--EEECCCCEEEECCCCCEEEEeC
Confidence 4567777641 12333 78999999999999874 443 6799999999999999999876
No 114
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.00 E-value=0.0016 Score=57.70 Aligned_cols=61 Identities=26% Similarity=0.402 Sum_probs=48.3
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCC-CeEEEEEEecC---CEEEeCCCCccccccCCCCcEEEE
Q 025650 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWVKKG---GMIVLPAGCYHRFTLDTDNYIKVI 156 (250)
Q Consensus 95 ~~EH~H~d-dEIr~IleGsG~Fdvrd~~-d~wirI~~e~G---DLI~VPAG~~HrF~l~~~~~vkA~ 156 (250)
-.+|.|.. .|.++|++|++.|++++.. ++|+.+.+ .| |.+.||+|..|-|...++.....|
T Consensus 285 rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ip~g~~h~~~n~~~~~~~~~ 350 (369)
T 3st7_A 285 KGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYV-SGDKLEVVDIPVGYTHNIENLGDTDMVTI 350 (369)
T ss_dssp EEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEE-ETTBCCEEEECTTEEEEEEECSSSCEEEE
T ss_pred eccccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEe-cCCcceEEEeCCCceEEeEEcCCCcEEEE
Confidence 46888885 7999999999999999764 55655444 26 999999999999998765556544
No 115
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=96.90 E-value=0.0015 Score=56.97 Aligned_cols=62 Identities=16% Similarity=0.113 Sum_probs=47.3
Q ss_pred eEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEE
Q 025650 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (250)
Q Consensus 75 Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vk 154 (250)
-++.+.|+. .+..|.|...|..|||+|+.. |. + -.+.+||++..|+|+.|.+... +..+.
T Consensus 46 ~lvr~~pG~----------~~p~H~H~g~Ee~~VL~G~f~----d~-~----~~~~~Gd~~~~P~g~~H~p~a~-~gc~~ 105 (223)
T 3o14_A 46 SIVRYAPGS----------RFSAHTHDGGEEFIVLDGVFQ----DE-H----GDYPAGTYVRNPPTTSHVPGSA-EGCTI 105 (223)
T ss_dssp EEEEECTTE----------ECCCEECTTCEEEEEEEEEEE----ET-T----EEEETTEEEEECTTCEECCEES-SCEEE
T ss_pred EEEEECCCC----------CcccccCCCCEEEEEEEeEEE----EC-C----eEECCCeEEEeCCCCccccEeC-CCCEE
Confidence 477888763 567999999999999999943 32 3 3588999999999999998874 33343
Q ss_pred EE
Q 025650 155 VI 156 (250)
Q Consensus 155 A~ 156 (250)
.+
T Consensus 106 ~v 107 (223)
T 3o14_A 106 FV 107 (223)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 116
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=96.88 E-value=0.0012 Score=55.24 Aligned_cols=60 Identities=20% Similarity=0.323 Sum_probs=47.0
Q ss_pred eeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCC
Q 025650 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 74 ~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
.-++.+.|+. -+..|.|...|..|||+|+..+. +..+ ..+++||.+.+|+|..|.+...+
T Consensus 45 v~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~f~~~--~~~~----~~~~aGd~~~~P~g~~H~~~a~~ 104 (165)
T 3cjx_A 45 VMRASFAPGL----------TLPLHFHTGTVHMYTISGCWYYT--EYPG----QKQTAGCYLYEPGGSIHQFNTPR 104 (165)
T ss_dssp EEEEEECTTC----------BCCEEEESSCEEEEEEESEEEET--TCTT----SCEETTEEEEECTTCEECEECCT
T ss_pred EEEEEECCCC----------cCCcccCCCCEEEEEEEEEEEEC--CCce----EEECCCeEEEeCCCCceeeEeCC
Confidence 4677787764 45799999999999999997762 1112 24789999999999999988754
No 117
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=96.54 E-value=0.0019 Score=54.10 Aligned_cols=69 Identities=12% Similarity=0.061 Sum_probs=51.3
Q ss_pred hcCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCcccccc
Q 025650 68 DRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 147 (250)
Q Consensus 68 erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l 147 (250)
+.| .+.-++...|+. -|..|.|+..|..|||+|+..+...+..+.| ...+|+++.-|+|..|....
T Consensus 43 e~g-~~t~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~~~~~~Gd~~~~~---~~~aGsYv~ePpGs~H~p~~ 108 (153)
T 3bal_A 43 ETS-SWTAIFNCPAGS----------SFASHIHAGPGEYFLTKGKMEVRGGEQEGGS---TAYAPSYGFESSGALHGKTF 108 (153)
T ss_dssp TTT-EEEEEEEECTTE----------EECCEEESSCEEEEEEESEEEETTCGGGTSE---EEESSEEEEECTTCEESCCE
T ss_pred ccc-eEEEEEEeCCCC----------CccCccCCCCEEEEEEEEEEEecCccccCcc---ccCCCeEEEcCCCCccccee
Confidence 345 466788888764 6889999999999999999776443221234 46899999999999998544
Q ss_pred CCC
Q 025650 148 DTD 150 (250)
Q Consensus 148 ~~~ 150 (250)
.++
T Consensus 109 ~~~ 111 (153)
T 3bal_A 109 FPV 111 (153)
T ss_dssp ESS
T ss_pred CCC
Confidence 333
No 118
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=95.82 E-value=0.0085 Score=53.21 Aligned_cols=46 Identities=17% Similarity=0.294 Sum_probs=37.6
Q ss_pred cCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCC
Q 025650 100 HTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 100 H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
|+.+|..+||+|+..+... +++ .+.+++||.+++|+|..=.++..+
T Consensus 184 ~~~~E~~~ILeG~v~lt~~--~G~--~~~~~aGD~~~~P~G~~~tWev~e 229 (238)
T 3myx_A 184 HKIHELMNLIEGRVVLSLE--NGS--SLTVNTGDTVFVAQGAPCKWTSTG 229 (238)
T ss_dssp CSSCEEEEEEECCEEEEET--TSC--EEEECTTCEEEECTTCEEEEEESS
T ss_pred CCCCEEEEEEEeEEEEEeC--CCC--EEEECCCCEEEECCCCEEEEEECc
Confidence 4578999999999887653 454 378999999999999988777664
No 119
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=95.35 E-value=0.046 Score=44.81 Aligned_cols=56 Identities=18% Similarity=0.235 Sum_probs=44.0
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCE-EEeCCCCccccccCCCC
Q 025650 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGM-IVLPAGCYHRFTLDTDN 151 (250)
Q Consensus 95 ~~EH~H~d-dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDL-I~VPAG~~HrF~l~~~~ 151 (250)
-.||.|.. .|.++++.|+..+.+.|...+ -++.+.+.+. +.||+|+.|.+..-++.
T Consensus 48 RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~~-~~~~L~~~~~gL~IppgvWh~~~~~s~~ 105 (141)
T 2pa7_A 48 RGFHAHKKLEQVLVCLNGSCRVILDDGNII-QEITLDSPAVGLYVGPAVWHEMHDFSSD 105 (141)
T ss_dssp EEEEEESSCCEEEEEEESCEEEEEECSSCE-EEEEECCTTEEEEECTTCEEEEECCCTT
T ss_pred ECcCcCCCceEEEEEEccEEEEEEECCcEE-EEEEECCCCcEEEeCCCEEEEEEEcCCC
Confidence 35899975 899999999999999754333 3566666666 99999999999876654
No 120
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=94.02 E-value=0.041 Score=47.88 Aligned_cols=57 Identities=12% Similarity=0.109 Sum_probs=42.9
Q ss_pred eeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCC
Q 025650 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (250)
Q Consensus 74 ~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~ 150 (250)
.-++.+.|+. -+..|.|..+|+ |||+|+.. +.+ -.+.+|+.|.+|+|..|.+.++++
T Consensus 148 v~l~r~~~G~----------~~~~~~hgG~Ei-lVL~G~~~----d~~-----~~~~~GsWlR~P~gs~h~~~ag~~ 204 (223)
T 3o14_A 148 VTHRKLEPGA----------NLTSEAAGGIEV-LVLDGDVT----VND-----EVLGRNAWLRLPEGEALSATAGAR 204 (223)
T ss_dssp EEEEEECTTC----------EEEECCSSCEEE-EEEEEEEE----ETT-----EEECTTEEEEECTTCCEEEEEEEE
T ss_pred EEEEEECCCC----------ccCCCCCCcEEE-EEEEeEEE----ECC-----ceECCCeEEEeCCCCccCcEECCC
Confidence 3456666553 467899977887 99999943 333 358899999999999999988554
No 121
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=93.89 E-value=0.11 Score=44.85 Aligned_cols=57 Identities=14% Similarity=0.055 Sum_probs=47.3
Q ss_pred ccccccCcceEEEEEe-ceEEEEEEeCC-----CeEEEEEEecCCEEEeCCCCccccccCCCC
Q 025650 95 FEEHLHTDEEIRYCVA-GSGYFDVRDRN-----EKWIRIWVKKGGMIVLPAGCYHRFTLDTDN 151 (250)
Q Consensus 95 ~~EH~H~ddEIr~Ile-GsG~Fdvrd~~-----d~wirI~~e~GDLI~VPAG~~HrF~l~~~~ 151 (250)
=-+|.|.......++. |+.+-.+-|.. ++|..+.+.++-.+.||+|+-|-|..-+++
T Consensus 73 RGlH~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~ 135 (197)
T 1nxm_A 73 RGLHAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF 135 (197)
T ss_dssp EEEEECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE
T ss_pred ceeeecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC
Confidence 3488888899999999 99755554444 789999999999999999999999877654
No 122
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=93.79 E-value=0.074 Score=47.81 Aligned_cols=58 Identities=24% Similarity=0.248 Sum_probs=41.8
Q ss_pred ccccccccCc-ceEEEEEec---eEEEEEEeCC-------------CeE------EEEEEecCCEEEeCCCCccccccCC
Q 025650 93 NFFEEHLHTD-EEIRYCVAG---SGYFDVRDRN-------------EKW------IRIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 93 ~F~~EH~H~d-dEIr~IleG---sG~Fdvrd~~-------------d~w------irI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
+--.+|.|.. .|-++..-| ..+....+.+ |.. -.|.+.||+-|.||+|++|||-..+
T Consensus 117 Q~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~Pg~~H~F~ae~ 196 (246)
T 3kmh_A 117 QVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLPPGLYHSFWAEA 196 (246)
T ss_dssp CEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEECTTEEEEEEECT
T ss_pred CCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecCCCCEEEEEecC
Confidence 3467999986 777777777 4444444322 111 2467899999999999999999988
Q ss_pred C
Q 025650 150 D 150 (250)
Q Consensus 150 ~ 150 (250)
.
T Consensus 197 g 197 (246)
T 3kmh_A 197 G 197 (246)
T ss_dssp T
T ss_pred C
Confidence 6
No 123
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=93.49 E-value=0.16 Score=43.18 Aligned_cols=55 Identities=18% Similarity=0.495 Sum_probs=43.1
Q ss_pred ccccc----CcceEEEEEeceEE---EEEEeCC----CeEEEEEEec--CCEEEeCCCCccccccCCCC
Q 025650 96 EEHLH----TDEEIRYCVAGSGY---FDVRDRN----EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (250)
Q Consensus 96 ~EH~H----~ddEIr~IleGsG~---Fdvrd~~----d~wirI~~e~--GDLI~VPAG~~HrF~l~~~~ 151 (250)
-+|.| .......++.|+.+ +|+| ++ ++|..+.+.+ +-.+.||+|.-|-|..-+++
T Consensus 61 GlH~q~~p~~q~Klv~vv~G~v~dV~VD~R-~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (183)
T 1dzr_A 61 GLHFQRGENAQGKLVRCAVGEVFDVAVDIR-KESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY 128 (183)
T ss_dssp EEEEECGGGCCCEEEEEEESEEEEEEEECC-TTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred eeEccCCCCCCcEEEEEeCCeEEEEEEECC-CCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 36766 45889999999986 4555 23 5799999887 47899999999999877664
No 124
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=93.33 E-value=0.59 Score=38.08 Aligned_cols=70 Identities=19% Similarity=0.156 Sum_probs=51.7
Q ss_pred HHhcccccc----ccCc-ceEEEEEeceEEEEEEeCCCe---EEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 90 KIKNFFEEH----LHTD-EEIRYCVAGSGYFDVRDRNEK---WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 90 kl~~F~~EH----~H~d-dEIr~IleGsG~Fdvrd~~d~---wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
.-+.|..-| +|.. -+-.-|++|+..|..-+.++. --.+...+|+..++|++..|+...-+++-..-+-||
T Consensus 22 lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~leFy 99 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFF 99 (127)
T ss_dssp SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEEEEEEE
T ss_pred ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCEEEEEEEE
Confidence 337888888 5876 588889999998875333332 234788999999999999999996444444447777
No 125
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=92.90 E-value=0.45 Score=40.20 Aligned_cols=55 Identities=11% Similarity=0.119 Sum_probs=45.1
Q ss_pred cccccC-cceEEEEEeceEEEEEEeCC------CeEEEEEEe---cCCEEEeCCCCccccccCCC
Q 025650 96 EEHLHT-DEEIRYCVAGSGYFDVRDRN------EKWIRIWVK---KGGMIVLPAGCYHRFTLDTD 150 (250)
Q Consensus 96 ~EH~H~-ddEIr~IleGsG~Fdvrd~~------d~wirI~~e---~GDLI~VPAG~~HrF~l~~~ 150 (250)
-+|.|. ..+...++.|+....+-|.- ++|..+.+. ++-.+.||+|.-|-|..-++
T Consensus 67 G~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd 131 (174)
T 3ejk_A 67 AWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGD 131 (174)
T ss_dssp EEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTT
T ss_pred CcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccC
Confidence 477776 58999999999998886532 568999998 56689999999999997665
No 126
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=92.73 E-value=0.23 Score=42.21 Aligned_cols=56 Identities=18% Similarity=0.378 Sum_probs=43.5
Q ss_pred ccccc---CcceEEEEEeceEE---EEEEeCC---CeEEEEEEec--CCEEEeCCCCccccccCCCC
Q 025650 96 EEHLH---TDEEIRYCVAGSGY---FDVRDRN---EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (250)
Q Consensus 96 ~EH~H---~ddEIr~IleGsG~---Fdvrd~~---d~wirI~~e~--GDLI~VPAG~~HrF~l~~~~ 151 (250)
-+|.| .......++.|+.+ +|+|... ++|..+.+.+ +-.+.||+|.-|-|..-+++
T Consensus 63 G~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 129 (184)
T 2ixk_A 63 GLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY 129 (184)
T ss_dssp EEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred eEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC
Confidence 36766 56899999999986 5555211 5899999887 47899999999999887664
No 127
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=92.71 E-value=0.18 Score=42.79 Aligned_cols=71 Identities=15% Similarity=0.201 Sum_probs=51.7
Q ss_pred hcCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceE-EEEEEeCCCeEEEEEE----ecCCE--EEeCCC
Q 025650 68 DRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSG-YFDVRDRNEKWIRIWV----KKGGM--IVLPAG 140 (250)
Q Consensus 68 erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG-~Fdvrd~~d~wirI~~----e~GDL--I~VPAG 140 (250)
.|...+.=-+-|.++. +-.||...-|||.++..|++ ...+-+.|++..++.+ .+|+. ++||+|
T Consensus 45 ~R~~~T~IYfLL~~g~----------~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G 114 (170)
T 1yud_A 45 SRQLWSSIYFLLRTGE----------VSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKG 114 (170)
T ss_dssp SSBSCEEEEEEEETTC----------CEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTT
T ss_pred CCccceEEEEEECCCC----------CCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCC
Confidence 4555555555565543 45789998899999999997 6656556777655554 56888 999999
Q ss_pred CccccccC
Q 025650 141 CYHRFTLD 148 (250)
Q Consensus 141 ~~HrF~l~ 148 (250)
+.+.-...
T Consensus 115 ~wqaa~~~ 122 (170)
T 1yud_A 115 CIFGSAMN 122 (170)
T ss_dssp CEEEEEES
T ss_pred CEEEEEEC
Confidence 98887655
No 128
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=92.66 E-value=0.26 Score=42.84 Aligned_cols=56 Identities=16% Similarity=0.336 Sum_probs=44.1
Q ss_pred ccccc----CcceEEEEEeceE---EEEEEeCC---CeEEEEEEec--CCEEEeCCCCccccccCCCC
Q 025650 96 EEHLH----TDEEIRYCVAGSG---YFDVRDRN---EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (250)
Q Consensus 96 ~EH~H----~ddEIr~IleGsG---~Fdvrd~~---d~wirI~~e~--GDLI~VPAG~~HrF~l~~~~ 151 (250)
-.|.| ...+...++.|+. .+|+|... ++|..+.+.+ +-.|.||+|.-|-|..-+++
T Consensus 84 GlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~ 151 (205)
T 3ryk_A 84 GLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH 151 (205)
T ss_dssp EEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS
T ss_pred EeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC
Confidence 36666 4689999999997 56666322 6899999986 78899999999999876654
No 129
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=92.46 E-value=0.16 Score=49.41 Aligned_cols=44 Identities=9% Similarity=0.062 Sum_probs=37.8
Q ss_pred CcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCC
Q 025650 101 TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 101 ~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
+.||+.++-+|++.+.-+ - | .+.+++||+++||+||.++..+.+
T Consensus 177 DGD~Livpq~G~l~i~TE-f-G---~L~v~pgei~VIPRGi~frv~l~~ 220 (471)
T 1eyb_A 177 DGDFLIVPQKGNLLIYTE-F-G---KMLVQPNEICVIQRGMRFSIDVFE 220 (471)
T ss_dssp SEEEEEEEEESCEEEEET-T-E---EEEECTTEEEEECTTCCEEEECSS
T ss_pred CCCEEEEEEeCCEEEEEe-c-c---cEEeccCCEEEECCccEEEEeeCC
Confidence 459999999999988775 2 2 488999999999999999999876
No 130
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=92.03 E-value=0.32 Score=42.64 Aligned_cols=56 Identities=21% Similarity=0.322 Sum_probs=43.3
Q ss_pred cccccC----cceEEEEEeceEE---EEEEeC---CCeEEEEEEecC--CEEEeCCCCccccccCCCC
Q 025650 96 EEHLHT----DEEIRYCVAGSGY---FDVRDR---NEKWIRIWVKKG--GMIVLPAGCYHRFTLDTDN 151 (250)
Q Consensus 96 ~EH~H~----ddEIr~IleGsG~---Fdvrd~---~d~wirI~~e~G--DLI~VPAG~~HrF~l~~~~ 151 (250)
-.|.|. ...+..++.|+.+ +|+|.. -++|..+.+.+. -.+.||+|.-|-|..-+++
T Consensus 69 GlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 136 (216)
T 2c0z_A 69 GIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE 136 (216)
T ss_dssp EEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred cCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC
Confidence 366665 5899999999986 555521 156999999875 6899999999999977665
No 131
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=91.69 E-value=0.61 Score=39.65 Aligned_cols=56 Identities=18% Similarity=0.415 Sum_probs=43.5
Q ss_pred ccccc---CcceEEEEEeceEE---EEEEeCC---CeEEEEEEec--CCEEEeCCCCccccccCCCC
Q 025650 96 EEHLH---TDEEIRYCVAGSGY---FDVRDRN---EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (250)
Q Consensus 96 ~EH~H---~ddEIr~IleGsG~---Fdvrd~~---d~wirI~~e~--GDLI~VPAG~~HrF~l~~~~ 151 (250)
-+|.| ...+...++.|+.+ +|+|... ++|..+.+.+ +-.+.||+|.-|-|..-+++
T Consensus 62 GlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (185)
T 1ep0_A 62 GLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE 128 (185)
T ss_dssp EEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred cceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 36666 67899999999986 5554211 4899999976 57899999999999877664
No 132
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=91.68 E-value=0.34 Score=41.97 Aligned_cols=56 Identities=23% Similarity=0.459 Sum_probs=42.2
Q ss_pred cccccC----cceEEEEEeceEE---EEEEeC---CCeEEEEEEec--CCEEEeCCCCccccccCCCC
Q 025650 96 EEHLHT----DEEIRYCVAGSGY---FDVRDR---NEKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (250)
Q Consensus 96 ~EH~H~----ddEIr~IleGsG~---Fdvrd~---~d~wirI~~e~--GDLI~VPAG~~HrF~l~~~~ 151 (250)
-.|.|. ...+..++.|+.+ +|+|.. =++|..+.+.+ +-.+.||+|.-|-|..-+++
T Consensus 61 GlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (205)
T 1oi6_A 61 GIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD 128 (205)
T ss_dssp EEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT
T ss_pred eeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC
Confidence 366664 5899999999986 444411 14699999887 47899999999999876665
No 133
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=91.68 E-value=0.25 Score=40.64 Aligned_cols=57 Identities=12% Similarity=0.231 Sum_probs=41.0
Q ss_pred CcceEEEEEeceEEEEEEeCC----------------------------------CeEEEEEEecCCEEEeCCCCccccc
Q 025650 101 TDEEIRYCVAGSGYFDVRDRN----------------------------------EKWIRIWVKKGGMIVLPAGCYHRFT 146 (250)
Q Consensus 101 ~ddEIr~IleGsG~Fdvrd~~----------------------------------d~wirI~~e~GDLI~VPAG~~HrF~ 146 (250)
..+-+...+.|+=.|.+-..+ -+.+.+.++|||+|.||+|-.|.-.
T Consensus 143 ~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~gW~H~V~ 222 (235)
T 4gjz_A 143 PQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVR 222 (235)
T ss_dssp SSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTCEEEECTTCEEEEE
T ss_pred cccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCCEEEeCCCCcEEEE
Confidence 346777889999999884221 1357899999999999999999866
Q ss_pred cCCCCcEEEEEee
Q 025650 147 LDTDNYIKVIPFG 159 (250)
Q Consensus 147 l~~~~~vkA~RlF 159 (250)
..+. -.++-++
T Consensus 223 ~l~~--sisvn~w 233 (235)
T 4gjz_A 223 ALDL--SFSVSFW 233 (235)
T ss_dssp ESSS--EEEEEEE
T ss_pred ECCC--EEEEEEe
Confidence 5432 3445444
No 134
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=91.61 E-value=1.3 Score=40.42 Aligned_cols=63 Identities=11% Similarity=0.066 Sum_probs=46.7
Q ss_pred ccccCcceEEEEEeceEEEEEEeCC-----------------------------------CeEEEEEEecCCEEEeCCCC
Q 025650 97 EHLHTDEEIRYCVAGSGYFDVRDRN-----------------------------------EKWIRIWVKKGGMIVLPAGC 141 (250)
Q Consensus 97 EH~H~ddEIr~IleGsG~Fdvrd~~-----------------------------------d~wirI~~e~GDLI~VPAG~ 141 (250)
.|....+-+...+.|+=.+.+-... ...+.+.+++||+|.||+|-
T Consensus 198 ~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~gW 277 (349)
T 3d8c_A 198 AHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYW 277 (349)
T ss_dssp EECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEECTTCEEEECTTC
T ss_pred ceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEECCCCEEEECCCC
Confidence 4444446777788998888764211 15789999999999999999
Q ss_pred ccccccCC-CCcEEEEEee
Q 025650 142 YHRFTLDT-DNYIKVIPFG 159 (250)
Q Consensus 142 ~HrF~l~~-~~~vkA~RlF 159 (250)
.|.-...+ +..-.++.++
T Consensus 278 wH~V~~l~d~~~sisvn~w 296 (349)
T 3d8c_A 278 WHHIESLLNGGITITVNFW 296 (349)
T ss_dssp EEEEEECTTSCCEEEEEEE
T ss_pred cEEEEEcCCCCcEEEEEEE
Confidence 99987655 3456778887
No 135
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=90.79 E-value=1.7 Score=37.19 Aligned_cols=67 Identities=18% Similarity=0.095 Sum_probs=50.0
Q ss_pred ccccccccCcceEEEEEeceEEEEE--EeCCCeEE----EEEEecCCEEEeCC--CCccccccC-CCCcEEEEEee
Q 025650 93 NFFEEHLHTDEEIRYCVAGSGYFDV--RDRNEKWI----RIWVKKGGMIVLPA--GCYHRFTLD-TDNYIKVIPFG 159 (250)
Q Consensus 93 ~F~~EH~H~ddEIr~IleGsG~Fdv--rd~~d~wi----rI~~e~GDLI~VPA--G~~HrF~l~-~~~~vkA~RlF 159 (250)
+.-..|-|....+..|++|+..-.+ +..++..+ +..+.+||.+.+++ |--|+.... .+.....+-+|
T Consensus 90 q~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~~avsLHvY 165 (208)
T 2gm6_A 90 QRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDDRVSISIHVY 165 (208)
T ss_dssp CBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEE
T ss_pred cccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCCCcEEEEEEE
Confidence 3567999999999999999986554 22233222 46799999999999 888998743 44457778888
No 136
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=90.61 E-value=0.57 Score=41.30 Aligned_cols=56 Identities=25% Similarity=0.451 Sum_probs=42.6
Q ss_pred cccccC----cceEEEEEeceEE---EEEEeC---CCeEEEEEEecC--CEEEeCCCCccccccCCCC
Q 025650 96 EEHLHT----DEEIRYCVAGSGY---FDVRDR---NEKWIRIWVKKG--GMIVLPAGCYHRFTLDTDN 151 (250)
Q Consensus 96 ~EH~H~----ddEIr~IleGsG~---Fdvrd~---~d~wirI~~e~G--DLI~VPAG~~HrF~l~~~~ 151 (250)
-.|.|. ...+..++.|+++ +|+|.. -++|..+.+.+. -.+.||+|.-|-|..-+++
T Consensus 80 GlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 147 (225)
T 1upi_A 80 GLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN 147 (225)
T ss_dssp EEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS
T ss_pred eeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC
Confidence 366664 5899999999986 444411 156999998875 6899999999999877665
No 137
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=90.05 E-value=2.2 Score=35.66 Aligned_cols=76 Identities=14% Similarity=0.151 Sum_probs=54.2
Q ss_pred eeEEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEe-CCCe---EEEEEEecCCEEEeCCCCccccccC
Q 025650 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRD-RNEK---WIRIWVKKGGMIVLPAGCYHRFTLD 148 (250)
Q Consensus 74 ~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~d-dEIr~IleGsG~Fdvrd-~~d~---wirI~~e~GDLI~VPAG~~HrF~l~ 148 (250)
.-++++.|+. .-..|-|.. ..+..|++|+....+-+ .++. .-...+.+||.+..|+|-.|++...
T Consensus 71 v~~l~W~PGq----------~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~ 140 (171)
T 3eqe_A 71 IIVINIPPNK----------ETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNP 140 (171)
T ss_dssp EEEEEECTTC----------BCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECC
T ss_pred EEEEEECCCC----------CcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECC
Confidence 3455566653 334799996 68888999999875422 2221 1246789999999999999999876
Q ss_pred CCCcEEEEEee
Q 025650 149 TDNYIKVIPFG 159 (250)
Q Consensus 149 ~~~~vkA~RlF 159 (250)
.......+=++
T Consensus 141 ~~~~aVSlHvY 151 (171)
T 3eqe_A 141 TSERMVSLHVY 151 (171)
T ss_dssp SSSCEEEEEEE
T ss_pred CCCCEEEEEEe
Confidence 65566667777
No 138
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=89.91 E-value=1.1 Score=39.92 Aligned_cols=62 Identities=13% Similarity=0.221 Sum_probs=43.9
Q ss_pred cccccccCcce-EEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCC--Cccccc-cCCCCcEEEEEee
Q 025650 94 FFEEHLHTDEE-IRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG--CYHRFT-LDTDNYIKVIPFG 159 (250)
Q Consensus 94 F~~EH~H~ddE-Ir~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG--~~HrF~-l~~~~~vkA~RlF 159 (250)
=|..|.|.+.| |-|+++|++.. +|.-+. .-.+++||+-..-|| |.|-=. ..++..+..+.||
T Consensus 76 gf~~HPHrg~EtvTyvl~G~~~H--~DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlW 141 (256)
T 2vec_A 76 AFQPRTYPKVDILNVILDGEAEY--RDSEGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLW 141 (256)
T ss_dssp EEEEECCSSEEEEEEEEESEEEE--EETTSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEE
T ss_pred ccCCcCCCCcEEEEEEEeeEEEE--EeCCCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEE
Confidence 36899999855 88999999765 555444 356899999999665 789733 3333456666666
No 139
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=89.58 E-value=0.66 Score=42.47 Aligned_cols=50 Identities=8% Similarity=0.140 Sum_probs=38.9
Q ss_pred ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 103 EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 103 dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
|=..++++|+....+ ++.. ..+++||.|.||||+.|.+..+++. +++.+-
T Consensus 227 d~wiWqLEGss~Vt~---~~q~--~~L~~~DsLLIpa~~~y~~~r~~gs--v~L~I~ 276 (286)
T 2qnk_A 227 DVWLWQLEGSSVVTM---GGRR--LSLAPDDSLLVLAGTSYAWERTQGS--VALSVT 276 (286)
T ss_dssp CEEEEEEESCEEEEE---TTEE--EEECTTEEEEECTTCCEEEEECTTC--EEEEEE
T ss_pred cEEEEEEcCceEEEE---CCeE--EeccCCCEEEecCCCeEEEEecCCe--EEEEEE
Confidence 677899999987555 3443 6799999999999999999988764 444443
No 140
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=88.86 E-value=1.2 Score=38.33 Aligned_cols=55 Identities=24% Similarity=0.363 Sum_probs=42.5
Q ss_pred cccccC----cceEEEEEeceEEE---EEEeCC----CeEEEEEEec--CCEEEeCCCCccccccCCCC
Q 025650 96 EEHLHT----DEEIRYCVAGSGYF---DVRDRN----EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (250)
Q Consensus 96 ~EH~H~----ddEIr~IleGsG~F---dvrd~~----d~wirI~~e~--GDLI~VPAG~~HrF~l~~~~ 151 (250)
-.|.|. ...+..++.|+.+. |+| ++ ++|..+.+.+ +-.+.||+|.-|-|..-+++
T Consensus 79 GlH~q~~p~~q~Klv~vv~G~v~dV~VDlR-~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~ 146 (196)
T 1wlt_A 79 GLHYQRTPKEQGKIIFVPKGRILDVAVDVR-KSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS 146 (196)
T ss_dssp EEEEECTTSCCEEEEEEEESEEEEEEEECB-TTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE
T ss_pred eEEccCCCCCCceEEEEeCCEEEEEEEECC-CCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 366665 58999999999855 443 22 5699999986 68899999999999877664
No 141
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=88.79 E-value=0.62 Score=42.13 Aligned_cols=73 Identities=18% Similarity=0.170 Sum_probs=45.1
Q ss_pred ccccccCcc---------eEEEE-Ee---ceEEEEEE---eCCCeEEEEEEecCCEEEeCCCCcccccc--CCCCcEEEE
Q 025650 95 FEEHLHTDE---------EIRYC-VA---GSGYFDVR---DRNEKWIRIWVKKGGMIVLPAGCYHRFTL--DTDNYIKVI 156 (250)
Q Consensus 95 ~~EH~H~dd---------EIr~I-le---GsG~Fdvr---d~~d~wirI~~e~GDLI~VPAG~~HrF~l--~~~~~vkA~ 156 (250)
|..|+|+.+ |++|+ ++ |.|.-.+= +..|+ .+.++.||.++||.|- |--.+ +-+.|+..+
T Consensus 168 yPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de--~~~V~~~d~VlvP~Gy-Hp~~a~pGy~~Yylwv 244 (270)
T 2qjv_A 168 WPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDE--CMAVYNRDVVXVPXGY-HPVATIAGYDNYYLNV 244 (270)
T ss_dssp CSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEE--EEEEETTCEEEESSSB-CCEEECTTCEEEEEEE
T ss_pred CCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCce--EEEEECCCEEecCCCc-CCCcCCCCcccEEEEE
Confidence 779999975 99987 44 45544440 11233 3889999999999999 98443 444554433
Q ss_pred EeeecCCCccceeecCCC
Q 025650 157 PFGLHSTVPMIIYPQGRD 174 (250)
Q Consensus 157 RlF~~~~~P~GWv~~~R~ 174 (250)
.- ++-.-|..++.|
T Consensus 245 Ma----G~~r~~~~~~dP 258 (270)
T 2qjv_A 245 MA----GPLRXWRFTWEE 258 (270)
T ss_dssp EE----CSSCCCCCEECG
T ss_pred EE----CCCccccccCCC
Confidence 22 333337654443
No 142
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=86.13 E-value=5.8 Score=38.61 Aligned_cols=65 Identities=14% Similarity=0.236 Sum_probs=45.6
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCC--------------------eEEEEEEecCCEEEeCCCCccccccCCCCcEE
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNE--------------------KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~d--------------------~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vk 154 (250)
|..|.-+.|=+.+-+.|+=.+.+....+ ..+.+.+++||++.||+|..|.-+..+..+-.
T Consensus 178 ~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~Sl 257 (489)
T 4diq_A 178 FAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSL 257 (489)
T ss_dssp SCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEE
T ss_pred ccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEEEecCCCceE
Confidence 3445555566677788888888864321 23578999999999999999998887544444
Q ss_pred EEEee
Q 025650 155 VIPFG 159 (250)
Q Consensus 155 A~RlF 159 (250)
.+.+-
T Consensus 258 hlTi~ 262 (489)
T 4diq_A 258 HLTLS 262 (489)
T ss_dssp EEEEE
T ss_pred EEeec
Confidence 45444
No 143
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=85.77 E-value=2.2 Score=40.58 Aligned_cols=55 Identities=15% Similarity=0.245 Sum_probs=41.6
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCC----------------CeEEEEEEecCCEEEeCCCCccccccCC
Q 025650 95 FEEHLHTDEEIRYCVAGSGYFDVRDRN----------------EKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 95 ~~EH~H~ddEIr~IleGsG~Fdvrd~~----------------d~wirI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
|..|.-..|-+.+.+.|+=.+.+-..+ ...+.+.++|||++.||+|..|.-...+
T Consensus 153 ~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 153 LPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp SCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred ccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 446665557777788899888885442 1235789999999999999999987654
No 144
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=84.50 E-value=2.7 Score=36.85 Aligned_cols=61 Identities=21% Similarity=0.342 Sum_probs=43.2
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCC--Cccc-cccCCCCcEEEEEee
Q 025650 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG--CYHR-FTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~d-dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG--~~Hr-F~l~~~~~vkA~RlF 159 (250)
|..|.|.+ |.|-|+++|+... +|.-+.. -.+++||+-..-|| |.|- +...++..+..+.||
T Consensus 54 f~~HPHrg~EtvTyvl~G~~~H--~DS~Gn~--~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlW 118 (242)
T 1tq5_A 54 FGTHPHKDMEILTYVLEGTVEH--QDSMGNK--EQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIW 118 (242)
T ss_dssp EEEEEECSCEEEEEEEESEEEE--EESSSCE--EEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEE
T ss_pred CCCcCCCCcEEEEEEEEeEEEE--EeCCCCc--EEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEEE
Confidence 57999998 5599999998654 5554442 56899999888555 8897 333434556666666
No 145
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=81.76 E-value=2.5 Score=31.15 Aligned_cols=40 Identities=10% Similarity=0.184 Sum_probs=30.3
Q ss_pred eeeEEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEeCCC
Q 025650 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE 122 (250)
Q Consensus 73 ~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~d-dEIr~IleGsG~Fdvrd~~d 122 (250)
+.-.+.+.++. .+..|+|.. -||.||++|++++.+-+..+
T Consensus 37 s~~r~~l~~gg----------~~~PH~hprA~ei~~V~~G~~~v~~V~~~g 77 (79)
T 1dgw_X 37 LLNCLQMNEGA----------LFVPHYNSRATVILVANEGRAEVELVGLEQ 77 (79)
T ss_dssp EEEEEEECTTC----------EEEEEEESSCEEEEEEEESCEEEEEEEEC-
T ss_pred ceEEEEEcCCc----------CcCCccCCCCcEEEEEEeceEEEEEecCCC
Confidence 44556666654 578999996 69999999999998865443
No 146
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=81.04 E-value=4 Score=37.19 Aligned_cols=53 Identities=19% Similarity=0.377 Sum_probs=40.2
Q ss_pred cccccCcceEEEEEeceEEEEEE-eCC---------------------------------CeEEEEEEecCCEEEeCCCC
Q 025650 96 EEHLHTDEEIRYCVAGSGYFDVR-DRN---------------------------------EKWIRIWVKKGGMIVLPAGC 141 (250)
Q Consensus 96 ~EH~H~ddEIr~IleGsG~Fdvr-d~~---------------------------------d~wirI~~e~GDLI~VPAG~ 141 (250)
..|....+-+...+.|+=.+.+- ..+ ...+.+.++|||++.||+|.
T Consensus 155 ~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~pGD~LyiP~gw 234 (342)
T 1vrb_A 155 KAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGL 234 (342)
T ss_dssp CSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTTCEEEECTTC
T ss_pred CCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECCCcEEEeCCCc
Confidence 35655557777778899888876 221 12467899999999999999
Q ss_pred ccccccC
Q 025650 142 YHRFTLD 148 (250)
Q Consensus 142 ~HrF~l~ 148 (250)
.|.-...
T Consensus 235 wH~v~s~ 241 (342)
T 1vrb_A 235 WHSTKSD 241 (342)
T ss_dssp EEEEECS
T ss_pred cEEEEEC
Confidence 9998866
No 147
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=80.04 E-value=4.4 Score=36.60 Aligned_cols=59 Identities=12% Similarity=0.204 Sum_probs=42.2
Q ss_pred cccCcceEEEEEeceEEEEEEeCC------------------------------CeEEEEEEecCCEEEeCCCCcccccc
Q 025650 98 HLHTDEEIRYCVAGSGYFDVRDRN------------------------------EKWIRIWVKKGGMIVLPAGCYHRFTL 147 (250)
Q Consensus 98 H~H~ddEIr~IleGsG~Fdvrd~~------------------------------d~wirI~~e~GDLI~VPAG~~HrF~l 147 (250)
|.-..+-+...+.|+=.+.+-... ...+.+.+++||+|.||+|-.|.-..
T Consensus 183 H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~LyiP~gWwH~v~~ 262 (338)
T 3al5_A 183 HYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPALWFHNVIS 262 (338)
T ss_dssp ECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCEEEECTTCEEEEEE
T ss_pred eECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCEEEECCCCeEEEee
Confidence 444445666678888888764221 13789999999999999999999876
Q ss_pred CCCCcEEEEEe
Q 025650 148 DTDNYIKVIPF 158 (250)
Q Consensus 148 ~~~~~vkA~Rl 158 (250)
.+ .-.++.+
T Consensus 263 l~--~sisvn~ 271 (338)
T 3al5_A 263 EE--FGVGVNI 271 (338)
T ss_dssp SS--CEEEEEE
T ss_pred CC--CEEEEEE
Confidence 64 3456664
No 148
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=78.54 E-value=8.6 Score=33.25 Aligned_cols=56 Identities=23% Similarity=0.277 Sum_probs=42.1
Q ss_pred ccccc----CcceEEEEEeceEEEEEEe--C----CCeEEEEEEec--CCEEEeCCCCccccccCCCC
Q 025650 96 EEHLH----TDEEIRYCVAGSGYFDVRD--R----NEKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (250)
Q Consensus 96 ~EH~H----~ddEIr~IleGsG~Fdvrd--~----~d~wirI~~e~--GDLI~VPAG~~HrF~l~~~~ 151 (250)
-.|.| .......++.|+.+--+-| + =++|..+.+.+ +-.+.||+|.-|-|..-+++
T Consensus 58 GlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~ 125 (201)
T 4hn1_A 58 GINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD 125 (201)
T ss_dssp EEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT
T ss_pred EEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC
Confidence 35655 4689999999998433332 1 26799888886 77899999999999876654
No 149
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=76.92 E-value=1 Score=40.62 Aligned_cols=26 Identities=12% Similarity=-0.144 Sum_probs=21.7
Q ss_pred EEEEEEecCCEEEeCCCCccccccCC
Q 025650 124 WIRIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 124 wirI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
--++.++|||.+.||||+.|-...+.
T Consensus 157 Ln~v~l~pGd~~~ipaGt~HA~~~G~ 182 (300)
T 1zx5_A 157 LNTFETTPYDTFVIRPGIPHAGEGLR 182 (300)
T ss_dssp EEEEECCTTCEEEECTTCCEEEESEE
T ss_pred hceeECCCCCEEEcCCCCceEcCCCC
Confidence 34688999999999999999876554
No 150
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=75.13 E-value=1.2 Score=40.35 Aligned_cols=24 Identities=29% Similarity=0.549 Sum_probs=21.1
Q ss_pred EEEEecCCEEEeCCCCccccccCC
Q 025650 126 RIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 126 rI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
++.++|||.+.||||+.|..-.+.
T Consensus 159 ~v~l~pGd~~~ipaGt~HA~~~G~ 182 (319)
T 1qwr_A 159 RIKIKPGDFYYVPSGTLHALCKGA 182 (319)
T ss_dssp EEECCTTCEEEECTTCCEEECSSE
T ss_pred EEEcCCCCEEEcCCCCceEecCCC
Confidence 588999999999999999976554
No 151
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=70.80 E-value=2.1 Score=40.08 Aligned_cols=24 Identities=17% Similarity=0.185 Sum_probs=20.8
Q ss_pred EEEEecCCEEEeCCCCccccccCC
Q 025650 126 RIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 126 rI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
++.++|||.+.||||+.|-.-.+.
T Consensus 241 ~v~l~pGd~~fipAG~~HAy~~G~ 264 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETPHAYLQGV 264 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEEEEE
T ss_pred EEECCCCCEEEcCCCCceEcCCCc
Confidence 588999999999999999876543
No 152
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=70.66 E-value=11 Score=30.22 Aligned_cols=67 Identities=18% Similarity=0.230 Sum_probs=45.7
Q ss_pred hccccccccCc--ceEEEEEeceEEEEEEeCCCe---EEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 92 KNFFEEHLHTD--EEIRYCVAGSGYFDVRDRNEK---WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 92 ~~F~~EH~H~d--dEIr~IleGsG~Fdvrd~~d~---wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
+.|..-|-=.. =.-.-|++|+..|..=+.++. -..+.+.+|+.-+||+...|+-.++++-.+. +-||
T Consensus 26 ~~l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f~-leFy 97 (119)
T 3dl3_A 26 EALLTHHNTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQFN-INFW 97 (119)
T ss_dssp HHHHSSBCCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCEEE-EEEE
T ss_pred HHHHhccCCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeEEE-EEEE
Confidence 55555553332 234568999999996322221 1346888999999999999999966655444 7777
No 153
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=68.86 E-value=7.9 Score=29.94 Aligned_cols=45 Identities=11% Similarity=0.119 Sum_probs=35.6
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCC
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
..|+.=|++|++.+.+. .++.| ....+||-..|||+..-.-...+
T Consensus 41 ~~E~M~vvsG~~~V~lp-g~~ew--~~~~aGesF~Vpans~F~l~v~~ 85 (94)
T 2oyz_A 41 APERMTVVKGALVVKRV-GEADW--TTYSSGESFDVEGNSSFELQVKD 85 (94)
T ss_dssp SCEEEEEEESEEEEEET-TCSSC--EEEETTCEEEECSSEEEEEEESS
T ss_pred CeEEEEEEEeEEEEEcC-CCCcC--EEECCCCEEEECCCCEEEEEEcc
Confidence 47888999999999886 34568 57999999999999765544443
No 154
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=67.13 E-value=11 Score=34.37 Aligned_cols=56 Identities=18% Similarity=0.245 Sum_probs=36.6
Q ss_pred ccccccCc--ceEEEEE---eceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCc
Q 025650 95 FEEHLHTD--EEIRYCV---AGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (250)
Q Consensus 95 ~~EH~H~d--dEIr~Il---eGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~ 152 (250)
|+.|+|+. ||.+|+- +|.+ |..-...++-..+.++-||.+++|..=.|- ..+.++|
T Consensus 196 yPpHkHDrr~EeyyYF~l~~~gfv-~q~~g~p~Etrhi~V~n~daVlvP~wh~h~-~~G~~~Y 256 (282)
T 1xru_A 196 MPCHTHERRMEVYFYFNMDDDACV-FHMMGQPQETRHIVMHNEQAVISPSWSIHS-GVGTKAY 256 (282)
T ss_dssp CSEEECTTEEEEEEEESCCTTCCE-EEEEEETTEEEEEEECSSEEEEECTTCEEE-EEESSCC
T ss_pred CCCccCCCCceEEEEEEeCCCCEE-EEEeCCCCCeeEEEEECCCEEEeCCCCCCC-CCCccce
Confidence 77999985 6777764 2333 333334555666889999999999644454 2355454
No 155
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=66.86 E-value=15 Score=32.61 Aligned_cols=62 Identities=18% Similarity=0.258 Sum_probs=41.8
Q ss_pred cccccccCcce-EEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCC--CCccccccCCCCcEEEEEee
Q 025650 94 FFEEHLHTDEE-IRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPA--GCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 94 F~~EH~H~ddE-Ir~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPA--G~~HrF~l~~~~~vkA~RlF 159 (250)
=|..|.|.+-| |-|+++|+... +|.-+. .-.+++||+=..=| ||.|-=...++..+..+.||
T Consensus 51 gf~~HPHrg~EtVTyvl~G~~~H--~DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlW 115 (277)
T 2p17_A 51 TFDVHPHRGIETVTYVISGELEH--FDSKAG--HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLW 115 (277)
T ss_dssp CCCCEEECSEEEEEEEEESCEEE--EETTTE--EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEE
T ss_pred CCCCCCCCCcEEEEEEEEeEEEE--eeCCCC--ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEEE
Confidence 37899999855 99999999654 555454 35689999966555 57786333333445555555
No 156
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=64.38 E-value=16 Score=26.59 Aligned_cols=35 Identities=9% Similarity=0.063 Sum_probs=26.6
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI~ 136 (250)
.+.+++|++|.......+.+++ ..--.+.+||++-
T Consensus 46 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 81 (149)
T 2pqq_A 46 GDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIG 81 (149)
T ss_dssp ECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEES
T ss_pred CCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEec
Confidence 3679999999999887765554 3445788999873
No 157
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=64.35 E-value=12 Score=34.09 Aligned_cols=56 Identities=14% Similarity=0.131 Sum_probs=28.0
Q ss_pred ccccccCc-ceEEE-EE-e--ceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCc
Q 025650 95 FEEHLHTD-EEIRY-CV-A--GSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (250)
Q Consensus 95 ~~EH~H~d-dEIr~-Il-e--GsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~ 152 (250)
|+.|+|+. .|.+| +- . |.++-..+ .-|+-+.+.++-||.+++|.|=+|-- .+..+|
T Consensus 196 yPpHkHDrr~E~yyYF~l~p~~~v~h~~g-~pdEtrh~~V~n~daVlvP~wgyHp~-~Gt~~Y 256 (289)
T 1ywk_A 196 MPCHTHERRMEAYVYFDMEEDTRIFHMMG-KPDETKHLVMSNEQAAISPSWSIHSG-VGTSNY 256 (289)
T ss_dssp --------CEEEEEEESCCTTCCEEEEES-STTSCEEEEECTTEEEEECTTSCCCE-EESSCC
T ss_pred CCCccCCCCCeeEEEEEeCCCCeEEEECC-CCCceEEEEEECCCEEEeCCCcccCC-CCCcCe
Confidence 67999984 34443 31 1 33322222 33445568899999999999988963 333344
No 158
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=64.01 E-value=6.4 Score=36.01 Aligned_cols=27 Identities=22% Similarity=0.327 Sum_probs=23.6
Q ss_pred EEEEEEecCCEEEeCCCCccccccCCC
Q 025650 124 WIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (250)
Q Consensus 124 wirI~~e~GDLI~VPAG~~HrF~l~~~ 150 (250)
.+++.+++||+|.||+|-.|.-...+.
T Consensus 255 ~~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 255 PLEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSC
T ss_pred eEEEEECCCCEEEeCCCCcEEEecCCC
Confidence 468999999999999999999776664
No 159
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=63.21 E-value=4 Score=38.66 Aligned_cols=27 Identities=22% Similarity=0.348 Sum_probs=22.9
Q ss_pred CeEEEEEEecCCEEEeCCCCccccccC
Q 025650 122 EKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (250)
Q Consensus 122 d~wirI~~e~GDLI~VPAG~~HrF~l~ 148 (250)
++++++.+++||.|.||+|-.|.-..-
T Consensus 241 ~~~~ev~l~pGEtlfIPsGWwH~V~nl 267 (392)
T 3pua_A 241 DKCYKCIVKQGQTLFIPSGWIYATLTP 267 (392)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEE
T ss_pred cceEEEEECCCcEEeeCCCceEEEecC
Confidence 357899999999999999999985433
No 160
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=62.64 E-value=8 Score=32.89 Aligned_cols=63 Identities=14% Similarity=0.299 Sum_probs=39.8
Q ss_pred hccccccccCcce---EEEEEe--ceEEEEEEeCC------------------CeEEEEEEecCCEEEeCCCCcccccc-
Q 025650 92 KNFFEEHLHTDEE---IRYCVA--GSGYFDVRDRN------------------EKWIRIWVKKGGMIVLPAGCYHRFTL- 147 (250)
Q Consensus 92 ~~F~~EH~H~ddE---Ir~Ile--GsG~Fdvrd~~------------------d~wirI~~e~GDLI~VPAG~~HrF~l- 147 (250)
..|+..|.|..-- |+|+-- +.|.+.+.+.. ..+..|.-++||||+-|+-+.|.-..
T Consensus 113 G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~l~H~V~p~ 192 (216)
T 2rg4_A 113 GGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPMN 192 (216)
T ss_dssp TCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETTSCEEECCC
T ss_pred CCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCCCEEeccCC
Confidence 4689999998643 333321 22333333321 23457889999999999999999665
Q ss_pred -CCCCcEE
Q 025650 148 -DTDNYIK 154 (250)
Q Consensus 148 -~~~~~vk 154 (250)
++++++.
T Consensus 193 ~~~~~RiS 200 (216)
T 2rg4_A 193 MAEEDRIS 200 (216)
T ss_dssp CSSSCEEE
T ss_pred CCCCCEEE
Confidence 4334443
No 161
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=62.18 E-value=4.6 Score=37.06 Aligned_cols=49 Identities=20% Similarity=0.278 Sum_probs=32.2
Q ss_pred ccccC-cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCcc--ccccCCCCcEEEE
Q 025650 97 EHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYH--RFTLDTDNYIKVI 156 (250)
Q Consensus 97 EH~H~-ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~H--rF~l~~~~~vkA~ 156 (250)
+=.|+ +-| +|||+|+..+ ++ -.+.+|.++.+|||+.- |-.++++ -+..+
T Consensus 106 ~Gi~~ad~E-~fVL~G~i~~-----G~----~~l~~h~Y~f~PaGV~~~~~kv~~~~-g~~iL 157 (303)
T 2qdr_A 106 SGIFTADLE-IFVIKGAIQL-----GE----WQLNKHSYSFIPAGVRIGSWKVLGGE-EAEIL 157 (303)
T ss_dssp CBEESSCEE-EEEEESEEEE-----TT----EEECTTEEEEECTTCCBCCEEEETTS-CEEEE
T ss_pred CcccccceE-EEEEEeEEEe-----CC----EEecCCceEEecCCCccCceeecCCC-CcEEE
Confidence 44454 456 9999999765 23 25899999999999843 3334443 34433
No 162
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=61.53 E-value=4.6 Score=39.77 Aligned_cols=26 Identities=27% Similarity=0.475 Sum_probs=22.4
Q ss_pred CeEEEEEEecCCEEEeCCCCcccccc
Q 025650 122 EKWIRIWVKKGGMIVLPAGCYHRFTL 147 (250)
Q Consensus 122 d~wirI~~e~GDLI~VPAG~~HrF~l 147 (250)
+.++++.+++||.+.||+|-.|.-..
T Consensus 363 ~~~~~v~l~pGEtlfIPsGW~HaV~t 388 (528)
T 3pur_A 363 GAVKRVVIKEGQTLLIPAGWIHAVLT 388 (528)
T ss_dssp TCCEEEEEETTCEEEECTTCEEEEEE
T ss_pred ccEEEEEECCCCEEEecCCceEEEec
Confidence 45789999999999999999998443
No 163
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=60.89 E-value=6.2 Score=30.19 Aligned_cols=33 Identities=15% Similarity=0.336 Sum_probs=23.6
Q ss_pred EEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 125 IRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 125 irI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
++=.+++||+++||+|-.=-..++. .+..+=|.
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~ 38 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIG 38 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS--SEEEEEEE
T ss_pred hhceecCCcEEEECCCCceeEEecC--CeEEEEEE
Confidence 3457999999999999776666664 26655443
No 164
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=60.54 E-value=4.8 Score=37.83 Aligned_cols=27 Identities=26% Similarity=0.453 Sum_probs=23.0
Q ss_pred CeEEEEEEecCCEEEeCCCCccccccC
Q 025650 122 EKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (250)
Q Consensus 122 d~wirI~~e~GDLI~VPAG~~HrF~l~ 148 (250)
++++++.+++||.|.||+|-.|.-..-
T Consensus 214 ~~~~ev~l~pGEtLfIPsGWwH~V~nl 240 (371)
T 3k3o_A 214 DKCYKCSVKQGQTLFIPTGWIHAVLTP 240 (371)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEE
T ss_pred CceEEEEECCCcEEEeCCCCeEEEecC
Confidence 457899999999999999999985543
No 165
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=60.47 E-value=4.4 Score=38.60 Aligned_cols=24 Identities=21% Similarity=0.278 Sum_probs=20.9
Q ss_pred EEEEecCCEEEeCCCCccccccCC
Q 025650 126 RIWVKKGGMIVLPAGCYHRFTLDT 149 (250)
Q Consensus 126 rI~~e~GDLI~VPAG~~HrF~l~~ 149 (250)
.|.++|||.|.||||+.|-.-.+.
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~G~ 290 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYISGD 290 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEEEE
T ss_pred eEecCCCCEEecCCCCccccCCCc
Confidence 488999999999999999876553
No 166
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=59.19 E-value=11 Score=32.21 Aligned_cols=41 Identities=12% Similarity=0.209 Sum_probs=33.1
Q ss_pred EEEEeceEEEEEEeC--CCeEEEEEEecCCEEEeCCCCccccc
Q 025650 106 RYCVAGSGYFDVRDR--NEKWIRIWVKKGGMIVLPAGCYHRFT 146 (250)
Q Consensus 106 r~IleGsG~Fdvrd~--~d~wirI~~e~GDLI~VPAG~~HrF~ 146 (250)
-+=+-++..|.++.. ++...++.++.||+++.+.+..+|+.
T Consensus 135 svSLG~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r~~~H 177 (211)
T 3i3q_A 135 SVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYH 177 (211)
T ss_dssp EEEEESCEEEEECCSSTTSCCEEEEECTTCEEEECGGGTTCCE
T ss_pred EEECCCCeEEEEecccCCCceEEEECCCCCEEEECchHHceEe
Confidence 455778999999853 35678999999999999998887643
No 167
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=59.09 E-value=4.7 Score=37.45 Aligned_cols=25 Identities=20% Similarity=0.308 Sum_probs=20.8
Q ss_pred EEEEEEecCCEEEeCCCCccccc-cC
Q 025650 124 WIRIWVKKGGMIVLPAGCYHRFT-LD 148 (250)
Q Consensus 124 wirI~~e~GDLI~VPAG~~HrF~-l~ 148 (250)
++++.=+|||+|++++|++||.- .|
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~n~G 303 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQATG 303 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESS
T ss_pred eEEEEECCCCEEEECCCceEEEEecc
Confidence 56777889999999999999944 44
No 168
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=58.54 E-value=19 Score=30.39 Aligned_cols=54 Identities=9% Similarity=0.030 Sum_probs=39.9
Q ss_pred cccccccCcceEEEEEeceE-EEEEEeCCCeEEEEEEe----cCC---EEEeCCCCcccccc
Q 025650 94 FFEEHLHTDEEIRYCVAGSG-YFDVRDRNEKWIRIWVK----KGG---MIVLPAGCYHRFTL 147 (250)
Q Consensus 94 F~~EH~H~ddEIr~IleGsG-~Fdvrd~~d~wirI~~e----~GD---LI~VPAG~~HrF~l 147 (250)
+-.||.-.-||+.+...|.. .+.+-+.|++..++.+. +|+ -.+||+|+...-..
T Consensus 65 ~S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~ 126 (172)
T 3loi_A 65 PDPFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLEHPEARHQVVVPRRVWFAQEV 126 (172)
T ss_dssp CEEEEECSSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTTSTTCBSEEEECTTCEEEEEE
T ss_pred CccCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcccCCcceEEEECCCEEEEEEe
Confidence 55677777899999999986 45555577877777775 467 58999998444333
No 169
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=57.84 E-value=20 Score=31.06 Aligned_cols=54 Identities=19% Similarity=0.182 Sum_probs=38.9
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEec----CC--EEEeCCCCcccccc
Q 025650 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKK----GG--MIVLPAGCYHRFTL 147 (250)
Q Consensus 94 F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~----GD--LI~VPAG~~HrF~l 147 (250)
+-.||.-.-|||.+...|++...+-..++..-++.+.+ |+ -++||+|+...-..
T Consensus 92 ~S~wHRv~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~ 151 (203)
T 1xe7_A 92 IGKFHKNINRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFL 151 (203)
T ss_dssp EEEEEEESSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEE
T ss_pred cccceeeCCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEe
Confidence 45677777899999999977665555677766667754 44 38999997665443
No 170
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=57.73 E-value=9.3 Score=36.61 Aligned_cols=29 Identities=28% Similarity=0.475 Sum_probs=24.0
Q ss_pred CeEEEEEEecCCEEEeCCCCccccccCCC
Q 025650 122 EKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (250)
Q Consensus 122 d~wirI~~e~GDLI~VPAG~~HrF~l~~~ 150 (250)
++++++.+++||.|.||+|-.|.-..-++
T Consensus 298 ~~~~~v~l~pGetlfIPsGWwH~V~nled 326 (447)
T 3kv4_A 298 DKCYKCSVKQGQTLFIPTGWIHAVLTPVD 326 (447)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEESSC
T ss_pred cceEEEEECCCcEEecCCCCeEEEecCCC
Confidence 35789999999999999999998554443
No 171
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=57.05 E-value=6 Score=38.18 Aligned_cols=44 Identities=20% Similarity=0.270 Sum_probs=34.0
Q ss_pred EEEEEeceEEEEEEeC-------------------------CCeEEEEEEecCCEEEeCCCCccccccC
Q 025650 105 IRYCVAGSGYFDVRDR-------------------------NEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (250)
Q Consensus 105 Ir~IleGsG~Fdvrd~-------------------------~d~wirI~~e~GDLI~VPAG~~HrF~l~ 148 (250)
...++.|+=.|.+-.. .++++++.+++||.|.||+|-.|.-..-
T Consensus 291 w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWwH~V~nl 359 (488)
T 3kv5_D 291 WYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWIHAVLTS 359 (488)
T ss_dssp EEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCEEEEEEE
T ss_pred eeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCceEEeeCC
Confidence 4477888888877522 1357899999999999999999985543
No 172
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=56.78 E-value=21 Score=32.10 Aligned_cols=37 Identities=30% Similarity=0.368 Sum_probs=29.6
Q ss_pred CcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCc
Q 025650 101 TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCY 142 (250)
Q Consensus 101 ~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~ 142 (250)
..-.|.++++|+|.... +++ .+.+++||-++|||++.
T Consensus 268 ~~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~~vpa~~~ 304 (319)
T 1qwr_A 268 ESFLICSVIEGSGLLKY---EDK--TCPLKKGDHFILPAQMP 304 (319)
T ss_dssp SSCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCC
T ss_pred CccEEEEEEcCeEEEEE---CCE--EEEEcCCcEEEEeCCCc
Confidence 34689999999998754 343 36799999999999874
No 173
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=56.57 E-value=22 Score=27.60 Aligned_cols=57 Identities=7% Similarity=-0.033 Sum_probs=36.2
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE-eC---CCCccccccCCCCcEEEEEe
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV-LP---AGCYHRFTLDTDNYIKVIPF 158 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI~-VP---AG~~HrF~l~~~~~vkA~Rl 158 (250)
.+.+++|++|.......+.+|+ .+--.+.+||++- +. .|.++.++.........+++
T Consensus 48 ~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a~~~~~v~~i 109 (194)
T 3dn7_A 48 CRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQSVENCELLSI 109 (194)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEESSCEEEEEE
T ss_pred eeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEEECCEEEEEE
Confidence 3789999999999887666654 4445689999985 21 23444444433344444444
No 174
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=56.52 E-value=89 Score=26.28 Aligned_cols=66 Identities=14% Similarity=-0.034 Sum_probs=47.6
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeC-CC------eEEEEEEecCCEEEe-CCCCccccccCC-CCcEEEEEee
Q 025650 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDR-NE------KWIRIWVKKGGMIVL-PAGCYHRFTLDT-DNYIKVIPFG 159 (250)
Q Consensus 94 F~~EH~H~d-dEIr~IleGsG~Fdvrd~-~d------~wirI~~e~GDLI~V-PAG~~HrF~l~~-~~~vkA~RlF 159 (250)
.-..|-|.. -.+..|++|+..-.+=+. ++ ..-...+.+||...+ |++--|+..... +.....+=++
T Consensus 82 ~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~~~avSlHvY 157 (200)
T 3eln_A 82 GSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPAVSLHLY 157 (200)
T ss_dssp BCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSSCCEEEEEEE
T ss_pred cCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCCCCEEEEEeC
Confidence 356899995 799999999998765221 11 122478999999999 777789988654 4456667777
No 175
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=54.81 E-value=18 Score=26.19 Aligned_cols=63 Identities=16% Similarity=0.084 Sum_probs=36.1
Q ss_pred hHHHHHHHHhcCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCe-EE---EEEEecCCE
Q 025650 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WI---RIWVKKGGM 134 (250)
Q Consensus 59 ~~~l~~L~~erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~-wi---rI~~e~GDL 134 (250)
++.+++|... .......++. ..|.+.. ..+.+++|++|.......+.+++ .+ --.+.+||+
T Consensus 19 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~ 83 (142)
T 3mdp_A 19 DEQLKDIALI-----SEEKSFPTGS---------VIFKENS-KADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAI 83 (142)
T ss_dssp HHHHHHHHHT-----EEEEEECTTC---------EEECTTS-BCCEEEEEEESCEEEECC---------CEEEEECTTCE
T ss_pred HHHHHHHHHh-----hcEEecCCCC---------EEEeCCC-CCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCE
Confidence 5667777643 3555666553 1222221 14789999999998876555553 22 346899998
Q ss_pred EE
Q 025650 135 IV 136 (250)
Q Consensus 135 I~ 136 (250)
+=
T Consensus 84 fG 85 (142)
T 3mdp_A 84 FG 85 (142)
T ss_dssp EC
T ss_pred ec
Confidence 84
No 176
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=53.83 E-value=52 Score=26.00 Aligned_cols=52 Identities=8% Similarity=0.035 Sum_probs=32.9
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEEeCCCCccccccCCCCcEEEEEe
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPF 158 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~Rl 158 (250)
.+.+++|++|..... .+.+|+ .+--.+.+||++-. ++.++.........+++
T Consensus 45 ~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~~G~----~~~~~~~A~~~~~v~~i 97 (220)
T 2fmy_A 45 RNLVFLVKSGRVRVY-LAYEDKEFTLAILEAGDIFCT----HTRAFIQAMEDTTILYT 97 (220)
T ss_dssp SCEEEEEEESEEEEE-EECSSCEEEEEEEETTCEEES----CSSSEEEESSSEEEEEE
T ss_pred CCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEeCC----ccceEEEEcCcEEEEEE
Confidence 478999999999885 334444 44457899999866 33334333334554444
No 177
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=52.97 E-value=15 Score=28.95 Aligned_cols=43 Identities=19% Similarity=0.295 Sum_probs=34.1
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCcccccc
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 147 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l 147 (250)
..|+-=|++|++.+.+. .++.| ....+|+-..|||+..-....
T Consensus 54 ~~E~MevvsG~l~V~Lp-G~~eW--~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 54 VAETIRVLSGMAYYHAE-GANDV--QELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp SCEEEEEEEEEEEEECT-TCSSC--EEEETTCEEEECSSSCEEEEE
T ss_pred CcEEEEEEEeEEEEECC-CCccC--EEECCCCEEEECCCCcEEEEE
Confidence 37888899999998886 34568 578999999999998655443
No 178
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=52.54 E-value=12 Score=35.92 Aligned_cols=28 Identities=36% Similarity=0.478 Sum_probs=23.7
Q ss_pred eEEEEEEecCCEEEeCCCCccccccCCC
Q 025650 123 KWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (250)
Q Consensus 123 ~wirI~~e~GDLI~VPAG~~HrF~l~~~ 150 (250)
+.+++.+++||+|.||+|=.|....-++
T Consensus 264 ~~~~v~l~pGE~LfIPsGWwH~V~nled 291 (451)
T 2yu1_A 264 DCQRIELKQGYTFVIPSGWIHAVYTPTD 291 (451)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEECSSC
T ss_pred cceEEEECCCcEEEeCCCceEEEecCCC
Confidence 5789999999999999999998665443
No 179
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=52.06 E-value=43 Score=26.27 Aligned_cols=62 Identities=8% Similarity=-0.035 Sum_probs=40.3
Q ss_pred hHHHHHHHHhcCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEE
Q 025650 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (250)
Q Consensus 59 ~~~l~~L~~erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI 135 (250)
++.++.|... .....+.++. ..|.+.- ..+.+++|++|.......+.+|+ .+--.+.+||++
T Consensus 16 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 78 (220)
T 3dv8_A 16 TAQKKLISDN-----LITQHVKKGT---------IIHNGNM-DCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMC 78 (220)
T ss_dssp HHHHHHHHTT-----CEEEEECTTC---------EEEEGGG-CCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred HHHHHHHHhh-----CceEEeCCCC---------EEECCCC-CcceEEEEEeceEEEEEECCCCCEEEEEecCCCCee
Confidence 5667777632 2566666653 2233322 24789999999999887766665 333467899996
No 180
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=51.67 E-value=8.2 Score=36.57 Aligned_cols=27 Identities=26% Similarity=0.459 Sum_probs=23.2
Q ss_pred CeEEEEEEecCCEEEeCCCCccccccC
Q 025650 122 EKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (250)
Q Consensus 122 d~wirI~~e~GDLI~VPAG~~HrF~l~ 148 (250)
++++++.+++||.+.||+|-.|.-..-
T Consensus 242 ~~~~~v~l~pGe~lfIPsGW~H~V~nl 268 (397)
T 3kv9_A 242 DKCYKCVVKQGHTLFVPTGWIHAVLTS 268 (397)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEE
T ss_pred CceEEEEECCCCEEEeCCCCeEEccCC
Confidence 457899999999999999999985543
No 181
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=51.55 E-value=38 Score=26.64 Aligned_cols=62 Identities=16% Similarity=0.148 Sum_probs=39.6
Q ss_pred hHHHHHHHHhcCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeE-EEEEEecCCEE
Q 025650 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKW-IRIWVKKGGMI 135 (250)
Q Consensus 59 ~~~l~~L~~erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~w-irI~~e~GDLI 135 (250)
++.+++|.. .....++.++. ..+.+-- ..+.+++|++|.......+.+++. +--.+.+||++
T Consensus 52 ~~~l~~l~~-----~~~~~~~~~ge---------~i~~~G~-~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 52 NEEVRYLCS-----YMQCYAAPRDC---------QLLTEGD-PGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp HHHHHHHHT-----TCEEEEECTTC---------EEECTTS-CCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred HHHHHHHHH-----hcEEEEeCCCC---------EEEcCCC-CCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 566777752 23555555542 1222221 247899999999988887766653 34478999987
No 182
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=50.97 E-value=31 Score=30.88 Aligned_cols=61 Identities=20% Similarity=0.203 Sum_probs=41.4
Q ss_pred ccccccCcce-EEEEE-eceEEEEEEeCCCeEEEEEEecCCEEEeCC--CCccccccCCCCcEEEEEee
Q 025650 95 FEEHLHTDEE-IRYCV-AGSGYFDVRDRNEKWIRIWVKKGGMIVLPA--GCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 95 ~~EH~H~ddE-Ir~Il-eGsG~Fdvrd~~d~wirI~~e~GDLI~VPA--G~~HrF~l~~~~~vkA~RlF 159 (250)
|..|.|.+-| |-|++ +|+... +|.-+. .-.+++||+=..=| ||.|-=...++..+..+.||
T Consensus 53 f~~HPHrg~EtVTyvl~~G~~~H--~DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlW 117 (290)
T 1j1l_A 53 FPDHPHRGFETVSYLLEGGSMAH--EDFCGH--TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLW 117 (290)
T ss_dssp EEEEEEBSEEEEEEECSSSCEEE--EETTSC--EEEECTTCEEEEECTTCEEEEEEECSSSCEEEEEEE
T ss_pred CCCCCCCCeEEEEEECcceEEEE--eeCCCC--ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEEEE
Confidence 7999999855 88999 998654 555444 25688999855554 57786333234456666666
No 183
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=50.90 E-value=62 Score=24.25 Aligned_cols=33 Identities=9% Similarity=-0.103 Sum_probs=24.9
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI 135 (250)
.+.+++|++|...... +.+|+ .+--.+.+||++
T Consensus 79 ~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 79 GDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp CCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEE
T ss_pred CcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEe
Confidence 4789999999998877 45554 333468899976
No 184
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=50.84 E-value=1.2e+02 Score=25.96 Aligned_cols=70 Identities=16% Similarity=0.061 Sum_probs=50.1
Q ss_pred cccccccCcceEEEEEeceEEEEE--EeCCCeEE----EEEEecCCEEEeCCC--CccccccC-CCCcEEEEEeeecCCC
Q 025650 94 FFEEHLHTDEEIRYCVAGSGYFDV--RDRNEKWI----RIWVKKGGMIVLPAG--CYHRFTLD-TDNYIKVIPFGLHSTV 164 (250)
Q Consensus 94 F~~EH~H~ddEIr~IleGsG~Fdv--rd~~d~wi----rI~~e~GDLI~VPAG--~~HrF~l~-~~~~vkA~RlF~~~~~ 164 (250)
.-..|=|.---+..|++|+..-.+ +..++... ...+.+||.+.++++ --|+.... .+.....+-++ +.
T Consensus 85 ~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d~~avSLHvY---g~ 161 (211)
T 3uss_A 85 ITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVY---GA 161 (211)
T ss_dssp BCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEE---SS
T ss_pred cCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCCCCEEEEEEc---CC
Confidence 456899998899999999986544 22233322 267999999999987 68887743 34457778888 55
Q ss_pred cc
Q 025650 165 PM 166 (250)
Q Consensus 165 P~ 166 (250)
|-
T Consensus 162 pl 163 (211)
T 3uss_A 162 NI 163 (211)
T ss_dssp CG
T ss_pred CC
Confidence 54
No 185
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=50.35 E-value=15 Score=33.86 Aligned_cols=40 Identities=5% Similarity=0.154 Sum_probs=33.7
Q ss_pred EEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCcccc
Q 025650 106 RYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRF 145 (250)
Q Consensus 106 r~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF 145 (250)
-+=+-+...|.++..+++.+++.+++||+++.+....+.+
T Consensus 227 slSLG~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w 266 (345)
T 3tht_A 227 SLSLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLW 266 (345)
T ss_dssp EEEESSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTS
T ss_pred EEECCCceeEEEccCCCceEEEEcCCCcEEEEChHHhhce
Confidence 3446789999999777778999999999999999988654
No 186
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=50.17 E-value=36 Score=26.54 Aligned_cols=35 Identities=9% Similarity=-0.144 Sum_probs=26.6
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI~ 136 (250)
.+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 17 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 17 ARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFG 52 (195)
T ss_dssp CCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEec
Confidence 4779999999998877665554 4445788999984
No 187
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=49.05 E-value=62 Score=25.65 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=25.4
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI~ 136 (250)
.+.+++|++|..... .+.+|+ .+--.+.+||++-
T Consensus 41 ~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG 75 (222)
T 1ft9_A 41 ENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC 75 (222)
T ss_dssp CCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE
T ss_pred CCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec
Confidence 478999999999875 445554 4445788999987
No 188
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=48.89 E-value=37 Score=26.40 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=26.8
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI~ 136 (250)
.+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 31 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 31 CETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFG 66 (207)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEES
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcc
Confidence 4679999999998887766554 3445788999984
No 189
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=48.60 E-value=38 Score=26.90 Aligned_cols=46 Identities=11% Similarity=0.135 Sum_probs=36.6
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCC
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~ 150 (250)
..|+-=|++|++...+. .++.| ....+|+-..|||+..-.....+.
T Consensus 57 ~~E~MevvsG~l~V~Lp-g~~eW--~~~~aGesF~VpanssF~lkv~~~ 102 (111)
T 3hqx_A 57 VPERMEIISGECRVKIA-DSTES--ELFRAGQSFYVPGNSLFKIETDEV 102 (111)
T ss_dssp SCEEEEEEESEEEEEET-TCSSC--EEEETTCEEEECTTCEEEEECSSC
T ss_pred CcEEEEEEEeEEEEEcC-CcccC--EEeCCCCEEEECCCCcEEEEECcc
Confidence 36888899999998886 34568 578999999999998766665543
No 190
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=46.53 E-value=43 Score=26.07 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=27.2
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI~ 136 (250)
.+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 37 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 37 AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 72 (210)
T ss_dssp CCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 4789999999999887766665 3444689999984
No 191
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=46.29 E-value=38 Score=27.44 Aligned_cols=38 Identities=13% Similarity=0.216 Sum_probs=26.8
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCC
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPA 139 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPA 139 (250)
.+.+++|++|.......+.+|+...+..-+||++--.+
T Consensus 36 ~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~G~~~Ge~~ 73 (238)
T 2bgc_A 36 QEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSG 73 (238)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEESSEEEESB
T ss_pred CceEEEEEecEEEEEEECCCCCEEEEEEcCCCEecchh
Confidence 47899999999988776666653333333899985543
No 192
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=45.79 E-value=9.9 Score=37.39 Aligned_cols=44 Identities=11% Similarity=-0.050 Sum_probs=28.9
Q ss_pred EEEEEEecCCEEEeCCCCccccccCCCCcEEEEEeeecCCCccceeecC
Q 025650 124 WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFGLHSTVPMIIYPQG 172 (250)
Q Consensus 124 wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF~~~~~P~GWv~~~ 172 (250)
++++.=++||+|++++|++||.-...-+-=.|..+ +.+. |.++.
T Consensus 337 vyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN~----a~~~-~~q~~ 380 (531)
T 3avr_A 337 VYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNV----GPLT-ACQYK 380 (531)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEE----CCSS-HHHHH
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeeeeEEEe----ccCc-hHHHH
Confidence 34667789999999999999954433222233433 4566 87753
No 193
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=45.54 E-value=20 Score=32.84 Aligned_cols=30 Identities=17% Similarity=0.348 Sum_probs=23.5
Q ss_pred ccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccc
Q 025650 99 LHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHR 144 (250)
Q Consensus 99 ~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~Hr 144 (250)
+|+.-|=-|+|+|.. ..|++..-|+|+.|.
T Consensus 235 iHdy~EEvY~LeG~~----------------d~G~Y~~RPpg~~HG 264 (303)
T 2qdr_A 235 IQPYNEEGYCLTGYC----------------DVGDYRIVKDHYWYC 264 (303)
T ss_dssp EECSCEEEEEEEEEE----------------EETTEEEETTEEEEE
T ss_pred eeccceeEEEEeeec----------------cCceeeEcCCCCccC
Confidence 477655567787754 459999999999998
No 194
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=45.22 E-value=21 Score=32.00 Aligned_cols=50 Identities=16% Similarity=0.212 Sum_probs=33.3
Q ss_pred cc-eEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 102 DE-EIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 102 dd-EIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
.- .+.++++| |.... +++ .+.+++||-++|||++... +...+ ..+.+|-|
T Consensus 247 ~~~~il~v~~G-~~i~~---~~~--~~~l~~G~~~~ipa~~~~~-~i~g~-~~~~~~a~ 297 (300)
T 1zx5_A 247 GVMNILYAAEG-YFILR---GKE--TADLHRGYSCLVPASTDSF-TVESE-RGKIVRIY 297 (300)
T ss_dssp SBCEEEEEEES-CEEEE---SSS--EEEECTTCEEEECTTCCEE-EEEEE-EEEEEEEE
T ss_pred CceEEEEEccc-EEEEe---CCe--EEEEccceEEEEeCCCceE-EEEeC-ceEEEEEE
Confidence 45 78899999 88655 233 2579999999999998532 22211 35555554
No 195
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=44.92 E-value=38 Score=26.47 Aligned_cols=35 Identities=6% Similarity=0.009 Sum_probs=27.2
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI~ 136 (250)
.+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 40 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 75 (216)
T 4ev0_A 40 GQALYLVASGKVRLFRTHLGGQERTLALLGPGELFG 75 (216)
T ss_dssp CCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEEC
T ss_pred CCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 4789999999999887766655 3445689999873
No 196
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=44.29 E-value=20 Score=33.77 Aligned_cols=57 Identities=19% Similarity=0.174 Sum_probs=28.4
Q ss_pred EEEEEEecCCEEEeCCCCccccccCCCCcEEEEEeeecCCCccceeecCCCCcchHHHHHHH
Q 025650 124 WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFGLHSTVPMIIYPQGRDMFKISCRRKLV 185 (250)
Q Consensus 124 wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF~~~~~P~GWv~~~R~~D~~~~R~~yl 185 (250)
+.++.-++||+|++=+|.+|+--...-+.--|+-| ..+. |.++.+.+..-.|+..-+
T Consensus 304 v~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNF----A~~~-Wl~~g~~a~~C~C~~d~v 360 (373)
T 3opt_A 304 CNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNF----ALEE-WLPIGKKAGKCHCISDSV 360 (373)
T ss_dssp CEEEEECTTCEEEECTTCCEEEEESSSEEEEEEEE----CCC--------------------
T ss_pred eEEEEECCCCEEEECCCceEEEEecCccHHHHHcc----CcHH-HHHhhccCccCcccCCcc
Confidence 56788999999999999999944444456666644 4666 999999888777775443
No 197
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=43.98 E-value=44 Score=26.71 Aligned_cols=62 Identities=6% Similarity=0.042 Sum_probs=40.1
Q ss_pred hHHHHHHHHhcCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEE
Q 025650 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (250)
Q Consensus 59 ~~~l~~L~~erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI 135 (250)
++.++.|... ....++.++. ..|.+-- ..+.+++|++|.......+.+|+ .+--.+.+||++
T Consensus 24 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 24 EQHVDALLSQ-----AVWRSYDRGE---------TLFLQEE-KAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp HHHHHHHHTT-----CEEEEECTTC---------EEECTTS-CCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred HHHHHHHHhh-----CEEEEECCCC---------EEEcCCC-ccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 5667777632 3556666553 1222211 24689999999999888766655 344568999988
No 198
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=43.69 E-value=21 Score=33.35 Aligned_cols=53 Identities=17% Similarity=0.202 Sum_probs=35.7
Q ss_pred ccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 99 LHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 99 ~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
.+....|.++++|+|.... . ++ .+.+++||-++|||+..- ++... ..+.+|.|
T Consensus 339 ~~~~~~il~v~~G~~~l~~--~-~~--~~~l~~G~~~fvpa~~~~-~~i~g--~~~~~~~~ 391 (394)
T 2wfp_A 339 GQHSAAILFCVEGEAVLRK--D-EQ--RLVLKPGESAFIGADESP-VNASG--TGRLARVY 391 (394)
T ss_dssp CCSSCEEEEEEEEEEEEEE--T-TE--EEEECTTCEEEECGGGCC-EEEEE--EEEEEEEE
T ss_pred cCCCcEEEEEEeceEEEEE--C-Ce--EEEEccCcEEEEeCCCce-EEEEe--eeEEEEEE
Confidence 3445689999999998644 2 32 368999999999998633 23322 35555555
No 199
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=43.32 E-value=24 Score=28.91 Aligned_cols=28 Identities=14% Similarity=0.196 Sum_probs=17.7
Q ss_pred EEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCC
Q 025650 106 RYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG 140 (250)
Q Consensus 106 r~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG 140 (250)
+|+.+|...-.++ .+ .+++||.|.+|.+
T Consensus 95 ~~v~~~g~~~~~~-A~------eLk~GD~v~v~~~ 122 (185)
T 2lcj_A 95 VLVYENGRFIEKR-AF------EVKEGDKVLVSEL 122 (185)
T ss_dssp EEEEETTEEEEEE-GG------GCCTTCEEEECCC
T ss_pred EEEecCCeEEEEE-HH------HCCCCCEEEEccc
Confidence 5555554433343 33 3789999999973
No 200
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=43.10 E-value=12 Score=36.84 Aligned_cols=25 Identities=20% Similarity=0.308 Sum_probs=20.3
Q ss_pred EEEEEEecCCEEEeCCCCccccccC
Q 025650 124 WIRIWVKKGGMIVLPAGCYHRFTLD 148 (250)
Q Consensus 124 wirI~~e~GDLI~VPAG~~HrF~l~ 148 (250)
++++.=+|||+|++++|++||.-..
T Consensus 312 vyr~iQkPGdfVit~PgtyH~Vqs~ 336 (510)
T 4ask_A 312 VYRFVQRPGDLVWINAGTVHWVQAT 336 (510)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEES
T ss_pred eEEEEECCCCEEEECCCceEEEEec
Confidence 3466778999999999999995543
No 201
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=42.35 E-value=44 Score=26.42 Aligned_cols=63 Identities=8% Similarity=0.151 Sum_probs=40.6
Q ss_pred hHHHHHHHHhcCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 025650 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (250)
Q Consensus 59 ~~~l~~L~~erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI~ 136 (250)
++++++|... ....+..++. ..|.+-- ..+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 24 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 24 AGTIERFLAH-----SHRRRYPTRT---------DVFRPGD-PAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp HHHHHHHHTT-----SEEEEECTTC---------EEECTTS-BCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred HHHHHHHHHh-----CeEEEeCCCC---------EEECCCC-CCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 6777777742 3456666553 1222211 23789999999998887666655 3445689999983
No 202
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=42.15 E-value=48 Score=26.27 Aligned_cols=57 Identities=7% Similarity=0.031 Sum_probs=35.3
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEEeC---CCCccccccCCCCcEEEEEe
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLP---AGCYHRFTLDTDNYIKVIPF 158 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI~VP---AG~~HrF~l~~~~~vkA~Rl 158 (250)
.+.+++|++|.......+.+|+ .+--.+.+||++-.. .|.++.++.........+++
T Consensus 47 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i 107 (227)
T 3d0s_A 47 GDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSM 107 (227)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEESSCEEEEEE
T ss_pred CCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEcccEEEEEE
Confidence 4779999999998887766555 334478899987321 23344444333334554444
No 203
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=40.47 E-value=54 Score=27.09 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=27.3
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI~ 136 (250)
.+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 87 ~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~G 122 (260)
T 3kcc_A 87 AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 122 (260)
T ss_dssp CCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEe
Confidence 4789999999999887766655 3445689999984
No 204
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=39.34 E-value=44 Score=26.15 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=26.4
Q ss_pred ceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEEe
Q 025650 103 EEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVL 137 (250)
Q Consensus 103 dEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI~V 137 (250)
+.+++|++|.......+.+|+ .+--.+.+||++-.
T Consensus 26 ~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~ 61 (202)
T 2zcw_A 26 DRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGE 61 (202)
T ss_dssp CCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECT
T ss_pred CeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeee
Confidence 679999999998877665554 33446889998843
No 205
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=38.03 E-value=48 Score=28.20 Aligned_cols=62 Identities=10% Similarity=0.039 Sum_probs=40.2
Q ss_pred hHHHHHHHHhcCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEE
Q 025650 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI 135 (250)
Q Consensus 59 ~~~l~~L~~erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI 135 (250)
++++++|... .....+.++. ..|.+-- ..+.+++|++|.......+.+++.+--.+.+||++
T Consensus 26 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 26 AEGLVSLAAS-----VQPLRAAAGQ---------VLLRQGE-PAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp HHHHHHHHHH-----CEEEEECTTC---------EEECTTS-BCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred HHHHHHHHhh-----CeEEEECCCC---------EEEeCCC-cCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 5677777643 2345555442 1222211 14789999999999887766666555678999987
No 206
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=37.75 E-value=9.6 Score=35.70 Aligned_cols=52 Identities=23% Similarity=0.167 Sum_probs=37.6
Q ss_pred eEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEeeecCCCccceeecCCCCcchH
Q 025650 123 KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFGLHSTVPMIIYPQGRDMFKIS 179 (250)
Q Consensus 123 ~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF~~~~~P~GWv~~~R~~D~~~ 179 (250)
.++++.-++||+|++-+|.||+--...-+.--|+-| ..|. |+++.+.|....
T Consensus 260 pv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNF----A~~~-Wl~~g~~A~~C~ 311 (354)
T 3dxt_A 260 PFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINF----ATPR-WIDYGKMASQCS 311 (354)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEE----CCGG-GHHHHHHCCCCC
T ss_pred ceEEEEeCCCcEEEECCCceEEEeeccccHhHhhcc----CcHH-HHHhhhhccccc
Confidence 466788999999999999999944444456666644 4666 999876654433
No 207
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=36.95 E-value=55 Score=27.16 Aligned_cols=69 Identities=16% Similarity=0.202 Sum_probs=43.9
Q ss_pred hcCCCeeeEEEECCCCCCChHHHHhcccccccc-CcceEEEEEeceEE-EEEEeCCCeEEEEEEe----cCCE--EEeCC
Q 025650 68 DRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLH-TDEEIRYCVAGSGY-FDVRDRNEKWIRIWVK----KGGM--IVLPA 139 (250)
Q Consensus 68 erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H-~ddEIr~IleGsG~-Fdvrd~~d~wirI~~e----~GDL--I~VPA 139 (250)
.|...+.=-+-|.++ .+-.||.= .-|||.+...|... ..+-+.++..-++.+. +|+. ++||+
T Consensus 36 ~R~~~TaIYfLL~~g----------~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge~pQ~vVP~ 105 (154)
T 1znp_A 36 ERGHSTAIYYLLEKG----------VRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGERPQVIVPA 105 (154)
T ss_dssp TTCSCEEEEEEEESS----------CCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTEESEEEECT
T ss_pred CCcceeEEEEEecCC----------CCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCcccEEEEcC
Confidence 455555444444433 35678886 78999999999843 3344455555556664 3543 89999
Q ss_pred CCccccc
Q 025650 140 GCYHRFT 146 (250)
Q Consensus 140 G~~HrF~ 146 (250)
|+-..-.
T Consensus 106 G~WqaA~ 112 (154)
T 1znp_A 106 NCWQSAE 112 (154)
T ss_dssp TCEEEEE
T ss_pred CEEEEee
Confidence 9765543
No 208
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=36.30 E-value=53 Score=26.03 Aligned_cols=34 Identities=18% Similarity=0.024 Sum_probs=25.8
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI 135 (250)
.+.+++|++|.......+.+|+ .+--.+.+||++
T Consensus 40 ~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 40 IEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQII 74 (213)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECSSEES
T ss_pred cceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEe
Confidence 4679999999998877656555 334468899987
No 209
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=36.27 E-value=64 Score=30.58 Aligned_cols=56 Identities=14% Similarity=0.201 Sum_probs=35.8
Q ss_pred CcceEEEEEeceEEEEEEeCCC-eEEEEEEecCCEEEeCCCCccccccCC---CCcEEEEEee
Q 025650 101 TDEEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDT---DNYIKVIPFG 159 (250)
Q Consensus 101 ~ddEIr~IleGsG~Fdvrd~~d-~wirI~~e~GDLI~VPAG~~HrF~l~~---~~~vkA~RlF 159 (250)
..-.|.+|++|+|..... ++ .- ...+++||-++|||+..=.++... ...+.+.|-|
T Consensus 378 ~~~~illv~~G~g~i~~~--~~~~~-~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~~~~~a~ 437 (440)
T 1pmi_A 378 NGPSIVIATNGKGTIQIT--GDDST-KQKIDTGYVFFVAPGSSIELTADSANQDQDFTTYRAF 437 (440)
T ss_dssp SSCEEEEEEESEEEEEET--TCGGG-CEEEETTCEEEECTTCCEEEEECSSCCSSCCEEEEEE
T ss_pred CCcEEEEEEeCeEEEEeC--Ccccc-eEEeccCCEEEEeCCCcEEEEEecccCCCcEEEEEEE
Confidence 457899999999998663 22 10 046899999999999433344331 2335555544
No 210
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=35.83 E-value=62 Score=26.29 Aligned_cols=34 Identities=6% Similarity=0.117 Sum_probs=26.6
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI 135 (250)
.+.+++|++|.......+.+|+ .+--.+.+||++
T Consensus 61 ~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~ 95 (243)
T 3la7_A 61 AERVYFLLKGAVKLSRVYEAGEEITVALLRENSVF 95 (243)
T ss_dssp CCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEE
T ss_pred CceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEE
Confidence 3789999999998887766655 444568999987
No 211
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=35.56 E-value=48 Score=26.68 Aligned_cols=65 Identities=8% Similarity=0.087 Sum_probs=39.6
Q ss_pred hHHHHHHHHhcCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEEE
Q 025650 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (250)
Q Consensus 59 ~~~l~~L~~erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI~ 136 (250)
++++++|....+ ....++.++. ..|.+-- ..+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 31 ~~~~~~l~~~~~---~~~~~~~~ge---------~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG 96 (232)
T 1zyb_A 31 HEDFTSILDKVK---LHFIKHKAGE---------TIIKSGN-PCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIE 96 (232)
T ss_dssp HHHHHHHHHTSC---CEEEEECTTC---------EEECTTS-BCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEEC
T ss_pred HHHHHHHHhhCC---cEEEEECCCC---------EEECCCC-cccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeee
Confidence 677888875411 2455555542 1222111 24789999999998776555443 4444678999873
No 212
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=35.39 E-value=22 Score=26.14 Aligned_cols=34 Identities=9% Similarity=0.008 Sum_probs=23.3
Q ss_pred cceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI 135 (250)
.+.+++|++|.......+.+++ .+--.+.+||++
T Consensus 53 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 53 AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred cceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 4779999999998776544443 333468899987
No 213
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=33.88 E-value=81 Score=24.98 Aligned_cols=62 Identities=8% Similarity=0.111 Sum_probs=39.3
Q ss_pred hHHHHHHHHhcCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEE
Q 025650 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (250)
Q Consensus 59 ~~~l~~L~~erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI 135 (250)
++.+++|... ..+.++.++. ..|.+- -..+.+++|++|.......+.+|+ .+--.+.+||++
T Consensus 19 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G-~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 81 (231)
T 3e97_A 19 EDAMREALKV-----VTERNFQPDE---------LVVEQD-AEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVV 81 (231)
T ss_dssp HHHHHHHHHT-----EEEEEECTTC---------BCCCTT-CTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEE
T ss_pred HHHHHHHHHh-----cEEEEECCCC---------EEEeCC-CCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEE
Confidence 5677777743 3566666653 122221 124789999999998877655554 444578999997
No 214
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=33.55 E-value=71 Score=25.89 Aligned_cols=35 Identities=11% Similarity=0.099 Sum_probs=26.9
Q ss_pred cceEEEEEeceEEEEEEeCCCeE-EEEEEecCCEEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEKW-IRIWVKKGGMIV 136 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~w-irI~~e~GDLI~ 136 (250)
.+.+++|++|.......+.+|+. +--.+.+||++-
T Consensus 50 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 85 (250)
T 3e6c_C 50 ITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIG 85 (250)
T ss_dssp CCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 47899999999988877666553 444688999984
No 215
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=33.43 E-value=60 Score=22.45 Aligned_cols=53 Identities=9% Similarity=-0.040 Sum_probs=35.2
Q ss_pred hHHhhcCeEEEEeCCCCc---CChHHHHHHHHhcCCC-----eeeEEEE-CCCCCCChHHHH
Q 025650 39 DQLSELGVLSWRLDADNY---ETDEELKKIREDRGYS-----YMDFCEV-CPEKLPNYEEKI 91 (250)
Q Consensus 39 ~~L~~lGV~~~~~~~~~~---e~~~~l~~L~~erGY~-----~~Dvi~l-~p~~~Pn~e~kl 91 (250)
+.|++.||.|..++.+.. +..+..++|++..|+. +.=+|.+ ..+.+..+++..
T Consensus 22 ~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i~~g~~igG~d~l~ 83 (87)
T 1aba_A 22 RLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGSHIGGFDQLR 83 (87)
T ss_dssp HHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSCEEESHHHHH
T ss_pred HHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEEECCEEEeCHHHHH
Confidence 567889999988887643 2345567788888987 6666666 544444555443
No 216
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=32.78 E-value=81 Score=23.04 Aligned_cols=42 Identities=7% Similarity=0.030 Sum_probs=29.4
Q ss_pred hHHhhcCeEEEEeCCCCcCChHHHHHHHHh-cCCCeeeEEEECCC
Q 025650 39 DQLSELGVLSWRLDADNYETDEELKKIRED-RGYSYMDFCEVCPE 82 (250)
Q Consensus 39 ~~L~~lGV~~~~~~~~~~e~~~~l~~L~~e-rGY~~~Dvi~l~p~ 82 (250)
+.|++.||.|..++.+. +.+..+.+++. .|+++.=+|.+..+
T Consensus 22 ~~L~~~gi~y~~idi~~--d~~~~~~~~~~~~G~~tVP~I~i~Dg 64 (92)
T 2lqo_A 22 TALTANRIAYDEVDIEH--NRAAAEFVGSVNGGNRTVPTVKFADG 64 (92)
T ss_dssp HHHHHTTCCCEEEETTT--CHHHHHHHHHHSSSSSCSCEEEETTS
T ss_pred HHHHhcCCceEEEEcCC--CHHHHHHHHHHcCCCCEeCEEEEeCC
Confidence 56789999998888763 23445555554 38888888888533
No 217
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=32.63 E-value=78 Score=23.54 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=23.2
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI 135 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI 135 (250)
.+.+++|++|...... +++.+. .+.+||++
T Consensus 79 ~~~~y~i~~G~v~~~~---~~~~~~-~~~~G~~f 108 (154)
T 3pna_A 79 GDNFYVIDQGEMDVYV---NNEWAT-SVGEGGSF 108 (154)
T ss_dssp CCEEEEEEESCEEEEE---TTEEEE-EECTTCEE
T ss_pred CCeEEEEEecEEEEEE---CCEEEE-EecCCCEe
Confidence 4789999999988765 455544 58999987
No 218
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=32.40 E-value=58 Score=25.47 Aligned_cols=31 Identities=6% Similarity=0.064 Sum_probs=23.6
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI 135 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI 135 (250)
.+.+++|++|...... .+|+. --.+.+||++
T Consensus 112 ~~~ly~I~~G~v~~~~--~~g~~-~~~l~~G~~f 142 (198)
T 2ptm_A 112 GDRMFFIQQGIVDIIM--SDGVI-ATSLSDGSYF 142 (198)
T ss_dssp CSEEEEEEECCEEEEC--TTSCE-EEEECTTCEE
T ss_pred CcEEEEEEeCEEEEEe--cCCeE-EEEecCCCEe
Confidence 4689999999987765 45553 4578999987
No 219
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=32.19 E-value=27 Score=29.44 Aligned_cols=39 Identities=13% Similarity=0.235 Sum_probs=30.9
Q ss_pred EEEEeceEEEEEEeCC---------CeEEEEEEecCCEEEeCCCCccc
Q 025650 106 RYCVAGSGYFDVRDRN---------EKWIRIWVKKGGMIVLPAGCYHR 144 (250)
Q Consensus 106 r~IleGsG~Fdvrd~~---------d~wirI~~e~GDLI~VPAG~~Hr 144 (250)
-+-+-++..|.++... +..+++.++.||+++.+.++.+.
T Consensus 132 svSLG~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~~q~~ 179 (204)
T 3s57_A 132 SVSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTH 179 (204)
T ss_dssp EEEEESCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETTHHHH
T ss_pred EEECCCceEEEEEEcCCCccccccCCceEEEECCCCCEEEECchhhhe
Confidence 4557789999998542 24678999999999999998763
No 220
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=31.47 E-value=29 Score=33.03 Aligned_cols=29 Identities=31% Similarity=0.381 Sum_probs=23.1
Q ss_pred EEEEEecCCEEEeCCCCccccccCCCCcEE
Q 025650 125 IRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (250)
Q Consensus 125 irI~~e~GDLI~VPAG~~HrF~l~~~~~vk 154 (250)
+.+.=++||.|+||||-+|--..-. +.|+
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~-~~i~ 321 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFH-SCIQ 321 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESS-EEEE
T ss_pred EEEEEcCCCEEEecCCCHHHHhccc-chhh
Confidence 5688899999999999999866544 3455
No 221
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=30.38 E-value=50 Score=26.26 Aligned_cols=62 Identities=16% Similarity=0.145 Sum_probs=36.2
Q ss_pred hHHHHHHHHhcCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCe-EEEEEEecCCEE
Q 025650 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (250)
Q Consensus 59 ~~~l~~L~~erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~-wirI~~e~GDLI 135 (250)
++++++|... ....++.++. ..|.+.- ..+.+++|++|.......+.+|+ .+--.+.+||++
T Consensus 23 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g~-~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 85 (232)
T 2gau_A 23 EEERELLDKE-----IQPFPCKKAS---------TVFSEGD-IPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFF 85 (232)
T ss_dssp HHHHHHHHHH-----CEEEEECTTC---------EEECTTC-CCCEEEEEEESCEEEEC-----CCCEEEEECTTCEE
T ss_pred HHHHHHHHhh-----CeEEEECCCC---------EEEeCCC-CCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 5677777652 3555566553 1222221 24679999999998776544433 344578899987
No 222
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=30.21 E-value=1e+02 Score=25.34 Aligned_cols=34 Identities=12% Similarity=-0.031 Sum_probs=25.5
Q ss_pred cceEEEEEeceEEEEEEeCCC--eEEEEEEecCCEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNE--KWIRIWVKKGGMI 135 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d--~wirI~~e~GDLI 135 (250)
.+.+++|++|+........++ ...--.+.+||++
T Consensus 198 ~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 198 GDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred CCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 367999999999887654443 2455678999988
No 223
>2cw8_A Endonuclease PI-pkoii; hydrolase; 2.50A {Thermococcus kodakarensis} PDB: 2cw7_A
Probab=30.09 E-value=43 Score=32.13 Aligned_cols=16 Identities=19% Similarity=0.374 Sum_probs=13.8
Q ss_pred EecCCEEEeCCCCccc
Q 025650 129 VKKGGMIVLPAGCYHR 144 (250)
Q Consensus 129 ~e~GDLI~VPAG~~Hr 144 (250)
+++||.|.+|..+++-
T Consensus 114 lk~GD~v~~~~~~~~~ 129 (537)
T 2cw8_A 114 LKPGDLVAVPRRLELP 129 (537)
T ss_dssp CCTTCEEEEESCCCCC
T ss_pred CCCCCEEEEeeecCCc
Confidence 7789999999988774
No 224
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=29.46 E-value=79 Score=22.82 Aligned_cols=29 Identities=10% Similarity=-0.012 Sum_probs=21.8
Q ss_pred ceEEEEEeceEEEEEEeCCCeEEEEEEecCCEE
Q 025650 103 EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI 135 (250)
Q Consensus 103 dEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI 135 (250)
+.+++|++|...... .+++. ..+.+||++
T Consensus 59 ~~~y~i~~G~v~~~~--~~g~~--~~l~~G~~f 87 (134)
T 2d93_A 59 DSWYVILNGTVEISH--PDGKV--ENLFMGNSF 87 (134)
T ss_dssp CEEEECCBSCEEEEC--SSSCE--EEECTTCEE
T ss_pred CeEEEEEeCEEEEEc--CCCcE--EEecCCCcc
Confidence 679999999988653 44554 458899987
No 225
>4dsd_A Putative periplasmic protein; BLIP-like fold, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; 1.75A {Bacteroides ovatus}
Probab=29.40 E-value=75 Score=24.96 Aligned_cols=41 Identities=15% Similarity=0.232 Sum_probs=23.8
Q ss_pred eEEEECCCCCCChHHHHhccccccccCcceEEEEEece----EEEEEE
Q 025650 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGS----GYFDVR 118 (250)
Q Consensus 75 Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGs----G~Fdvr 118 (250)
|..+|.++.+| +..+.|+..|.-...-+..-.+.. +.|.|.
T Consensus 3 ~d~~i~~~~LP---~~a~~fi~~~Fp~~~i~~ve~e~~~~~~~~YeV~ 47 (129)
T 4dsd_A 3 DVITKDMNQLP---LPARNFINSNFTKPQVAHIKIDKDMMESTKYEVV 47 (129)
T ss_dssp CEEECCGGGSC---HHHHHHHHHHSSSCCEEEEEEEECTTSCEEEEEE
T ss_pred CceEcChhhCC---HHHHHHHHHHCCCCceEEEEEecCcCCCccEEEE
Confidence 56678877777 566677777765444444444432 445554
No 226
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=28.22 E-value=1.1e+02 Score=27.08 Aligned_cols=67 Identities=19% Similarity=0.210 Sum_probs=43.3
Q ss_pred cCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceE-EEEEEeCCC-------------------------
Q 025650 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSG-YFDVRDRNE------------------------- 122 (250)
Q Consensus 69 rGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG-~Fdvrd~~d------------------------- 122 (250)
|...+.=-+-|.++. +-.||.-.-||+.+...|.. .+.+-+.++
T Consensus 57 R~~~TaIYfLL~~g~----------~S~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~~~~P~~~~~~~~~~~ 126 (225)
T 3m3i_A 57 RHAYTTIYFLCTPES----------PSHLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQPPAAPQAETDTADARP 126 (225)
T ss_dssp EESCEEEEEEECSSS----------CEEEEECSSEEEEEEEEESCEEEEEEESSSTTTTC------------------CC
T ss_pred cccceeEEEEecCCC----------CcccEEecCCEEEEEECCCCEEEEEEcCCCccccccccccccccccccccccccc
Confidence 444454445555543 45677777899999999996 344444455
Q ss_pred ---eEEEEEEe----cCCE--EEeCCCCcccc
Q 025650 123 ---KWIRIWVK----KGGM--IVLPAGCYHRF 145 (250)
Q Consensus 123 ---~wirI~~e----~GDL--I~VPAG~~HrF 145 (250)
...++.+. +|+. .+||+|+.-.-
T Consensus 127 ~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA 158 (225)
T 3m3i_A 127 KYQVYRRVLVGARVERGELLQYTVPGGAIFGS 158 (225)
T ss_dssp SSCEEEEEEESSCGGGTCBSEEEECTTCEEEE
T ss_pred ccCceEEEEeCCCccCCceeEEEeCCCEEEEE
Confidence 45566674 4664 89999985443
No 227
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=26.38 E-value=1.2e+02 Score=22.14 Aligned_cols=60 Identities=13% Similarity=0.144 Sum_probs=36.6
Q ss_pred hHHHHHHHHhcCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEecCCEEEe
Q 025650 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVL 137 (250)
Q Consensus 59 ~~~l~~L~~erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI~V 137 (250)
++.+++|.. .....++.++. ..+.+-- ..+.+++|++|...... ++.. --.+.+||++--
T Consensus 40 ~~~~~~l~~-----~~~~~~~~~g~---------~i~~~g~-~~~~~y~i~~G~v~~~~---~~~~-~~~~~~G~~fG~ 99 (160)
T 4f8a_A 40 DGCLRALAM-----EFQTVHCAPGD---------LIYHAGE-SVDSLCFVVSGSLEVIQ---DDEV-VAILGKGDVFGD 99 (160)
T ss_dssp HHHHHHHHT-----TCEEEEECTTC---------EEECTTS-BCCEEEEEEESEEEEEE---TTEE-EEEEETTCEEEC
T ss_pred HHHHHHHHH-----hceeeeeCCCC---------EEEeCCC-CccEEEEEEeeEEEEEE---CCEE-EEEecCCCEeCc
Confidence 566777763 23455555553 1222211 14789999999988755 3333 357899999854
No 228
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=26.21 E-value=31 Score=28.23 Aligned_cols=29 Identities=21% Similarity=0.346 Sum_probs=18.9
Q ss_pred EEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCC
Q 025650 106 RYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGC 141 (250)
Q Consensus 106 r~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~ 141 (250)
+|+.+|...-.++ .++ +++||.|.+|.|.
T Consensus 105 ~~v~~~g~~~w~~-A~e------Lk~GD~v~~~~~~ 133 (186)
T 2jmz_A 105 VYISKTGEVLEIN-AEM------VKVGDYIYIPKNN 133 (186)
T ss_dssp EEEEETTEEEEEE-GGG------CCTTSEEEEECSS
T ss_pred EEEeCCCeEEEEE-hhc------CCCCCEEEecccC
Confidence 6666654333343 333 8899999999864
No 229
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=25.43 E-value=1.2e+02 Score=25.24 Aligned_cols=33 Identities=18% Similarity=0.106 Sum_probs=24.7
Q ss_pred ceEEEEEeceEEEEEEe-CCCe-EEEEEEecCCEE
Q 025650 103 EEIRYCVAGSGYFDVRD-RNEK-WIRIWVKKGGMI 135 (250)
Q Consensus 103 dEIr~IleGsG~Fdvrd-~~d~-wirI~~e~GDLI 135 (250)
+.+++|++|+......+ .+++ ..--.+.+||++
T Consensus 199 ~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 199 DTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp CEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred CEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 67999999999887765 2333 444578999987
No 230
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=24.37 E-value=73 Score=23.42 Aligned_cols=53 Identities=15% Similarity=0.145 Sum_probs=34.4
Q ss_pred hHHhhcCeEEEEeCCCCcCChHHH-HHHHHhcCCCeeeEEEECCCCCCChHHHH
Q 025650 39 DQLSELGVLSWRLDADNYETDEEL-KKIREDRGYSYMDFCEVCPEKLPNYEEKI 91 (250)
Q Consensus 39 ~~L~~lGV~~~~~~~~~~e~~~~l-~~L~~erGY~~~Dvi~l~p~~~Pn~e~kl 91 (250)
..|+++||.|..++.+..+....+ +.|++..|+.+.=+|.+..+.+..+++..
T Consensus 35 ~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi~g~~igG~d~l~ 88 (114)
T 3h8q_A 35 ELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVNKVHVGGCDQTF 88 (114)
T ss_dssp HHHHHTTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEETTEEEESHHHHH
T ss_pred HHHHHcCCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEECCEEEeCHHHHH
Confidence 567888998877777654333444 55777778877777777765555554433
No 231
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=23.92 E-value=84 Score=26.90 Aligned_cols=38 Identities=11% Similarity=0.332 Sum_probs=30.7
Q ss_pred EEEeceEEEEEEeCC----------CeEEEEEEecCCEEEeCCCCccc
Q 025650 107 YCVAGSGYFDVRDRN----------EKWIRIWVKKGGMIVLPAGCYHR 144 (250)
Q Consensus 107 ~IleGsG~Fdvrd~~----------d~wirI~~e~GDLI~VPAG~~Hr 144 (250)
+=|-+...|.++... +..++|.++.|||++....+...
T Consensus 159 lSLG~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G~~r~~ 206 (238)
T 2iuw_A 159 LSFGATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGATQAD 206 (238)
T ss_dssp EEEESCEEEEEEECCC--------CCCEEEEEECTTCEEEEEETHHHH
T ss_pred EECCCCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEChhhhCc
Confidence 446689999998654 36789999999999999998644
No 232
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=23.35 E-value=73 Score=25.02 Aligned_cols=30 Identities=10% Similarity=0.152 Sum_probs=22.2
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI 135 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI 135 (250)
.+.+++|++|...... .+++. ..+.+||++
T Consensus 113 ~~~ly~I~~G~v~v~~--~~g~~--~~l~~G~~f 142 (202)
T 3bpz_A 113 GKKMYFIQHGVVSVLT--KGNKE--MKLSDGSYF 142 (202)
T ss_dssp CCEEEEEEECEEEEEC--TTSCC--EEEETTCEE
T ss_pred CCeEEEEeccEEEEEE--CCCeE--EEEcCCCEe
Confidence 4689999999987643 34443 368999987
No 233
>2lok_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Halobacterium SP} PDB: 4dlh_A
Probab=22.24 E-value=3.1e+02 Score=23.50 Aligned_cols=80 Identities=11% Similarity=0.144 Sum_probs=50.7
Q ss_pred CCCCcCCHhHHhhc-CeEEEEeCCCCcCChHHHHHHHHhcCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEE
Q 025650 31 DPKEFVSLDQLSEL-GVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCV 109 (250)
Q Consensus 31 ~p~~~vs~~~L~~l-GV~~~~~~~~~~e~~~~l~~L~~erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~Il 109 (250)
+|..+++.++++.. |+.|+..|.. |...=.++-.++. +.+-.+.. ++-+..|..
T Consensus 33 ~p~sPl~~~~r~~F~Gl~~fp~Dp~----------------wrv~a~~~p~~~~--------~~~~v~t~-~g~~~~~~~ 87 (197)
T 2lok_A 33 HDQSPIPPADRGAFDGLRYFDIDAS----------------FRVAARYQPARDP--------EAVELETT-RGPPAEYTR 87 (197)
T ss_dssp CTTSCCCHHHHHTCCCCCCCCCCST----------------TEEEEEEEECSSC--------CEEEEBCS-SSSCEEEEE
T ss_pred CccCCCChhHHhcCCCCccCCCCCC----------------EEEEEEEEECCCC--------cEEEEEec-CCceEEEEE
Confidence 46667888888775 9998876642 2332333333331 23333444 567889999
Q ss_pred eceEEEEEEeCCCeEEEEEE---ecCCEEEeC
Q 025650 110 AGSGYFDVRDRNEKWIRIWV---KKGGMIVLP 138 (250)
Q Consensus 110 eGsG~Fdvrd~~d~wirI~~---e~GDLI~VP 138 (250)
-|...|.+. |+.+++.+ +.|+-+.||
T Consensus 88 ~G~v~F~l~---G~~~~L~~~~~~~~~~Lflp 116 (197)
T 2lok_A 88 AAVLGFDLG---DSHHTLTAFRVEGESSLFVP 116 (197)
T ss_dssp EEEEEEEET---TEEEEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEC---CEEEEEEEEecCCCCeEEEE
Confidence 999999884 56666766 456666665
No 234
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=20.86 E-value=24 Score=33.25 Aligned_cols=48 Identities=13% Similarity=0.082 Sum_probs=34.7
Q ss_pred eEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEeeecCCCccceeecCCCC
Q 025650 123 KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFGLHSTVPMIIYPQGRDM 175 (250)
Q Consensus 123 ~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF~~~~~P~GWv~~~R~~ 175 (250)
.++++.-++||+|++=+|.||+--...-+.--|+.|= .+. |.++.+.+
T Consensus 278 pv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNFA----~~~-Wl~~g~~a 325 (381)
T 2ox0_A 278 PFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFA----TRR-WIEYGKQA 325 (381)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEEC----CTT-HHHHHHHC
T ss_pred ceEEEEecCCCEEEECCCcEEEeecCcccHHHHhccC----cHH-HHHHhHhh
Confidence 3668889999999999999999444444566666544 556 98875543
No 235
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=20.72 E-value=2.3e+02 Score=27.02 Aligned_cols=52 Identities=12% Similarity=0.047 Sum_probs=40.6
Q ss_pred EEEEEeceEEEEEEeCCCeEEEEEEecCCEEEeCCCCccccccCCCCcEEEEEee
Q 025650 105 IRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKVIPFG 159 (250)
Q Consensus 105 Ir~IleGsG~Fdvrd~~d~wirI~~e~GDLI~VPAG~~HrF~l~~~~~vkA~RlF 159 (250)
=+.|.+|.........++. ....++|+|-.-|-+-+.|.|+ +. ..|..+|.-
T Consensus 357 hY~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H~w~-G~-GtVlkLgsG 408 (443)
T 3g7d_A 357 HYVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRHRWH-GT-GTVLKFGSG 408 (443)
T ss_dssp EEEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCEEEE-SS-EEEEEEEEC
T ss_pred eEEEecCceEEEecCCCCc-cceEECCCCceeeccccccccc-CC-ceEEEeccC
Confidence 3668999999888755544 8899999999999999999999 32 245555554
No 236
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=20.53 E-value=4.1e+02 Score=23.63 Aligned_cols=70 Identities=16% Similarity=0.121 Sum_probs=43.7
Q ss_pred hcCCCeeeEEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCeEEEEEEec--------CCEEEeCC
Q 025650 68 DRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKK--------GGMIVLPA 139 (250)
Q Consensus 68 erGY~~~Dvi~l~p~~~Pn~e~kl~~F~~EH~H~ddEIr~IleGsG~Fdvrd~~d~wirI~~e~--------GDLI~VPA 139 (250)
.-.|..-+++.|.++. -+...+-..|=..+.+.|.+.+.+. ++.+...... .|.+-||.
T Consensus 25 ~~~y~~f~~~~L~~Ge----------~~~~~~~~~E~~iv~l~G~~~V~~~---g~~~~~~g~R~svF~~~~p~~lYvp~ 91 (270)
T 2qjv_A 25 GWEYVGFDVWQLXAGE----------SITLPSDERERCLVLVAGLASVXAA---DSFFYRIGQRMSPFERIPAYSVYLPH 91 (270)
T ss_dssp TSSSCEEEEEEECTTC----------EEEECCSSEEEEEEEEESCEEEEET---TEEEEEECCCSSGGGCSCCCEEEECS
T ss_pred CcEEeEEEEEEecCCC----------EEEecCCCcEEEEEEecceEEEEEC---CEEEeccccccccccCCCCcEEEECC
Confidence 4466778889998774 1112222224455668899888774 4433333333 59999999
Q ss_pred CCccccccCCC
Q 025650 140 GCYHRFTLDTD 150 (250)
Q Consensus 140 G~~HrF~l~~~ 150 (250)
|..=.|+..+.
T Consensus 92 g~~v~i~a~~~ 102 (270)
T 2qjv_A 92 HTEAXVTAETD 102 (270)
T ss_dssp SCCEEEEESSS
T ss_pred CCEEEEEecCC
Confidence 99666776653
No 237
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=20.31 E-value=1.6e+02 Score=21.26 Aligned_cols=30 Identities=7% Similarity=-0.055 Sum_probs=22.7
Q ss_pred cceEEEEEeceEEEEEEeCCCeEEEEEEecCCEE
Q 025650 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI 135 (250)
Q Consensus 102 ddEIr~IleGsG~Fdvrd~~d~wirI~~e~GDLI 135 (250)
.+.+++|++|...... +++.+ -.+.+||++
T Consensus 64 ~~~~y~i~~G~v~~~~---~g~~~-~~~~~G~~f 93 (139)
T 3ocp_A 64 GSLVYVMEDGKVEVTK---EGVKL-CTMGPGKVF 93 (139)
T ss_dssp CCEEEEEEECCEEEEE---TTEEE-EEECTTCEE
T ss_pred CCEEEEEEeCEEEEEE---CCEEE-EEeCCCCEe
Confidence 4789999999988732 45544 467999987
Done!