Query 025653
Match_columns 250
No_of_seqs 126 out of 1161
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 08:05:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025653.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025653hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02364 L-ascorbate peroxidas 100.0 3.7E-78 8.1E-83 532.0 23.3 249 1-250 1-250 (250)
2 PLN02879 L-ascorbate peroxidas 100.0 8.4E-78 1.8E-82 529.0 23.3 248 1-249 2-249 (251)
3 PLN02608 L-ascorbate peroxidas 100.0 1.3E-76 2.9E-81 529.4 23.3 244 5-249 3-246 (289)
4 cd00691 ascorbate_peroxidase A 100.0 4.7E-72 1E-76 494.8 22.0 233 16-249 13-252 (253)
5 PLN03030 cationic peroxidase; 100.0 1.4E-69 2.9E-74 490.6 17.3 229 2-249 31-310 (324)
6 cd00693 secretory_peroxidase H 100.0 2.8E-68 6.2E-73 480.7 19.4 229 2-249 8-285 (298)
7 cd00692 ligninase Ligninase an 100.0 2E-63 4.3E-68 451.9 22.0 229 19-249 20-277 (328)
8 cd00649 catalase_peroxidase_1 100.0 3.8E-59 8.2E-64 430.4 18.7 233 15-248 43-396 (409)
9 cd00314 plant_peroxidase_like 100.0 6.5E-59 1.4E-63 412.4 18.8 226 12-244 3-255 (255)
10 PF00141 peroxidase: Peroxidas 100.0 3.7E-59 8.1E-64 408.2 6.6 198 12-227 1-230 (230)
11 TIGR00198 cat_per_HPI catalase 100.0 1E-55 2.2E-60 430.7 18.3 234 11-245 44-398 (716)
12 PRK15061 catalase/hydroperoxid 100.0 9.1E-54 2E-58 415.0 18.3 229 15-244 55-403 (726)
13 cd08201 plant_peroxidase_like_ 100.0 2.6E-53 5.7E-58 373.4 13.9 209 28-244 37-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 7.3E-50 1.6E-54 355.6 19.3 227 14-246 14-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 1.6E-44 3.5E-49 352.3 19.8 218 26-246 441-709 (716)
16 PRK15061 catalase/hydroperoxid 100.0 1.3E-43 2.8E-48 344.4 19.6 218 26-246 448-721 (726)
17 COG0376 KatG Catalase (peroxid 100.0 4.7E-39 1E-43 300.4 16.5 232 16-248 69-418 (730)
18 COG0376 KatG Catalase (peroxid 99.9 4.4E-22 9.6E-27 186.9 13.1 218 26-246 458-725 (730)
19 PF08383 Maf_N: Maf N-terminal 43.7 16 0.00035 22.6 1.4 15 147-161 19-34 (35)
20 cd07922 CarBa CarBa is the A s 41.0 18 0.00039 26.7 1.6 31 219-249 18-59 (81)
21 PRK12346 transaldolase A; Prov 36.5 43 0.00092 31.0 3.7 86 77-165 138-241 (316)
22 cd00957 Transaldolase_TalAB Tr 33.9 51 0.0011 30.4 3.7 84 77-163 137-238 (313)
23 PTZ00411 transaldolase-like pr 32.0 61 0.0013 30.2 4.0 86 77-165 149-252 (333)
24 PRK12309 transaldolase/EF-hand 28.2 85 0.0019 29.8 4.3 86 77-165 143-246 (391)
25 PRK05269 transaldolase B; Prov 27.8 43 0.00093 30.9 2.2 86 77-165 139-242 (318)
26 TIGR00874 talAB transaldolase. 22.2 78 0.0017 29.3 2.8 86 77-165 137-240 (317)
27 cd00439 Transaldolase Transald 20.4 51 0.0011 29.3 1.1 48 76-125 127-176 (252)
No 1
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=3.7e-78 Score=532.03 Aligned_cols=249 Identities=82% Similarity=1.357 Sum_probs=242.0
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHhhhhhcCCchhhHHHhhhcccCCcccCCCCCCCCCcccchHHhhccCCCchHHHHHH
Q 025653 1 MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRL 80 (250)
Q Consensus 1 ~~~~cp~~~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~ 80 (250)
|++.||.+.+.+++++++++++|++++.+++++|.||||+||||++||.....|||||||.+++|+++++|.||.+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~~~E~~~~~N~gl~~~~~~ 80 (250)
T PLN02364 1 MTKNYPTVSEDYKKAVEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRFDAEQAHGANSGIHIALRL 80 (250)
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHccccCcCcCCCCCCCCccccccccccCCCccCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHHHHHhCCCCchhHHHHhhhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHh-cCCChhhHhhh
Q 025653 81 LEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQ-MGLSDKDIVAL 159 (250)
Q Consensus 81 i~~~k~~~~~VS~ADiialaa~~av~~~GGP~~~~~~GR~D~~~~~~~~~lP~p~~~~~~l~~~F~~~-~Gl~~~e~VaL 159 (250)
|+.||+++++|||||||+|||++||+++|||.|+|++||+|+++++++++||.|..+++++++.| +. +||+++|||||
T Consensus 81 i~~ik~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F-~~~~Gl~~~d~VaL 159 (250)
T PLN02364 81 LDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPPEGRLPDATKGCDHLRDVF-AKQMGLSDKDIVAL 159 (250)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccccCCCCCCCcCHHHHHHHH-HHhcCCCHHHheee
Confidence 99999999999999999999999999999999999999999999998889999999999999999 75 69999999999
Q ss_pred ccCccccccccCCCCCCCCCCCCCcccCcHHHHHhhhccCCCcccccccccccCCCCcHHHHHHhhhChHHHHHHHHHHH
Q 025653 160 SGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTYLLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAH 239 (250)
Q Consensus 160 ~GaHtiG~~~~~~~~~~g~~~~tp~~fDN~Yy~~l~~~~~~gll~l~SD~~L~~d~~t~~~v~~ya~~~~~F~~~F~~Am 239 (250)
+||||||++||.++++.|+|+.||.+|||+||++|+.++++|+++|+||++|+.|++|+.+|+.||.|++.|+++|++||
T Consensus 160 sGaHTiG~~hc~r~~~~g~~~~tp~~fDn~Yy~~ll~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am 239 (250)
T PLN02364 160 SGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAH 239 (250)
T ss_pred ecceeeccccCCCCCCCCCCCCCCCccchHHHHHHhcCCcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998767999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCC
Q 025653 240 LKLSELGFAEA 250 (250)
Q Consensus 240 ~Km~~lgv~~~ 250 (250)
+||+++|+.++
T Consensus 240 ~Km~~lg~~~~ 250 (250)
T PLN02364 240 MKLSELGFADA 250 (250)
T ss_pred HHHHccCCCCC
Confidence 99999999885
No 2
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=8.4e-78 Score=528.98 Aligned_cols=248 Identities=78% Similarity=1.326 Sum_probs=242.3
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHhhhhhcCCchhhHHHhhhcccCCcccCCCCCCCCCcccchHHhhccCCCchHHHHHH
Q 025653 1 MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRL 80 (250)
Q Consensus 1 ~~~~cp~~~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~ 80 (250)
|.+.||.+.++++++++.+|++|++++.++.++|.+|||+||||++||..+++|||||||++++|+++|+|.||+.++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~~E~~~~~N~gL~~~~~~ 81 (251)
T PLN02879 2 VKKSYPEVKEEYKKAVQRCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHPQELAHDANNGLDIAVRL 81 (251)
T ss_pred CcccCCCccHHHHHHHHHHHHHHHHHHhCCCchhHhHHHHHhhhccccCCCCCCCCCeeecChhhccCCCcCChHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred HHHHHHhCCCCchhHHHHhhhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCChhhHhhhc
Q 025653 81 LEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS 160 (250)
Q Consensus 81 i~~~k~~~~~VS~ADiialaa~~av~~~GGP~~~~~~GR~D~~~~~~~~~lP~p~~~~~~l~~~F~~~~Gl~~~e~VaL~ 160 (250)
|++||+++++|||||||+||+++||+++|||.|+|++||+|+.+++++++||.|+.+++++++.| +++||+++|||||+
T Consensus 82 i~~iK~~~~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~~~~lP~p~~~~~~l~~~F-~~~Gl~~~dlVALs 160 (251)
T PLN02879 82 LDPIKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVF-GRMGLNDKDIVALS 160 (251)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCcccCCCCCCCCHHHHHHHH-HHcCCCHHHHeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cCccccccccCCCCCCCCCCCCCcccCcHHHHHhhhccCCCcccccccccccCCCCcHHHHHHhhhChHHHHHHHHHHHH
Q 025653 161 GGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTYLLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHL 240 (250)
Q Consensus 161 GaHtiG~~~~~~~~~~g~~~~tp~~fDN~Yy~~l~~~~~~gll~l~SD~~L~~d~~t~~~v~~ya~~~~~F~~~F~~Am~ 240 (250)
||||||++||.++|+.|+|+.||.+|||+||++|+.++.+|+++|+||++|+.|++|+++|++||.||++|+++|+.||+
T Consensus 161 GaHTiG~ah~~r~g~~g~~d~tp~~FDN~Yy~~ll~~~~~gll~L~SD~aL~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~ 240 (251)
T PLN02879 161 GGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHL 240 (251)
T ss_pred ccccccccccccccCCCCCCCCccceeHHHHHHHHcCCcCCCccchhhHHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987679999999999999999999999999999999999999999
Q ss_pred HHHhCCCCC
Q 025653 241 KLSELGFAE 249 (250)
Q Consensus 241 Km~~lgv~~ 249 (250)
||+++|+.+
T Consensus 241 KL~~lg~~~ 249 (251)
T PLN02879 241 KLSELGFAD 249 (251)
T ss_pred HHHccCCCC
Confidence 999999986
No 3
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=1.3e-76 Score=529.42 Aligned_cols=244 Identities=69% Similarity=1.152 Sum_probs=236.9
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhhcCCchhhHHHhhhcccCCcccCCCCCCCCCcccchHHhhccCCCchHHHHHHHHHH
Q 025653 5 YPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPF 84 (250)
Q Consensus 5 cp~~~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~i~~~ 84 (250)
.|.+...|..+|+.+|++|+++++++.++|.+|||+||||++||.+++.|||||||++++|+++++|.||++++++|++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~~E~~~~~N~gL~~g~~vid~i 82 (289)
T PLN02608 3 APVVDAEYLKEIEKARRDLRALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNEEEYSHGANNGLKIAIDLCEPV 82 (289)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecccccCCccccchHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred HHhCCCCchhHHHHhhhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCChhhHhhhccCcc
Q 025653 85 KEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHT 164 (250)
Q Consensus 85 k~~~~~VS~ADiialaa~~av~~~GGP~~~~~~GR~D~~~~~~~~~lP~p~~~~~~l~~~F~~~~Gl~~~e~VaL~GaHt 164 (250)
|.++++|||||||+|||++||+++|||.|+|++||+|+++++++++||.|+.+++++++.| +++||+++|||||+||||
T Consensus 83 K~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~LP~p~~~~~~l~~~F-~~~Gl~~~D~VaLsGAHT 161 (289)
T PLN02608 83 KAKHPKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPEEGRLPDAKKGAKHLRDVF-YRMGLSDKDIVALSGGHT 161 (289)
T ss_pred HHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCccCCCcCCCCCHHHHHHHH-HHcCCCHHHHhhhccccc
Confidence 9999999999999999999999999999999999999999988889999999999999999 999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCcccCcHHHHHhhhccCCCcccccccccccCCCCcHHHHHHhhhChHHHHHHHHHHHHHHHh
Q 025653 165 LGRCHKERSGFEGPWTRNPLIFDNSYFTYLLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSE 244 (250)
Q Consensus 165 iG~~~~~~~~~~g~~~~tp~~fDN~Yy~~l~~~~~~gll~l~SD~~L~~d~~t~~~v~~ya~~~~~F~~~F~~Am~Km~~ 244 (250)
||++||.+.+|.|+|+.||.+|||+||++|+.++.+|+++|+||++|+.|++|+++|+.||.||++|+++|+.||+||++
T Consensus 162 iG~ahc~r~g~~g~~~~Tp~~FDN~Yy~~ll~~~~~gll~L~SD~~L~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~ 241 (289)
T PLN02608 162 LGRAHPERSGFDGPWTKEPLKFDNSYFVELLKGESEGLLKLPTDKALLEDPEFRPYVELYAKDEDAFFRDYAESHKKLSE 241 (289)
T ss_pred cccccccCCCCCCCCCCCCCccChHHHHHHHcCCcCCccccccCHhhhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHc
Confidence 99999998888899999999999999999999865799888999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 025653 245 LGFAE 249 (250)
Q Consensus 245 lgv~~ 249 (250)
+||.+
T Consensus 242 lgvlt 246 (289)
T PLN02608 242 LGFTP 246 (289)
T ss_pred CCCCC
Confidence 99875
No 4
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=4.7e-72 Score=494.85 Aligned_cols=233 Identities=64% Similarity=1.116 Sum_probs=215.6
Q ss_pred HHHHHHHHhhhhhcCCchhhHHHhhhcccCCcccCCCCCCCCCcccchHHhhccCCCchHHHHHHHHHHHHhCCCCchhH
Q 025653 16 VEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYAD 95 (250)
Q Consensus 16 v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~i~~~k~~~~~VS~AD 95 (250)
+..+|+.++.+++++.++|++|||+||||++||++.+.|||||++.+++|+++++|.+|.+++++|++||.++++|||||
T Consensus 13 ~~~V~~~v~~~~~~~~~~~~llRl~FHDc~~~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~~~VScAD 92 (253)
T cd00691 13 LEAARNDIAKLIDDKNCAPILVRLAWHDSGTYDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKYPDISYAD 92 (253)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHhccccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHcCCCCHHH
Confidence 33344444444449999999999999999999999999999999999899999999999889999999999999999999
Q ss_pred HHHhhhhhhhhccCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCHHHHHHHHHHhcCCChhhHhhhccCccccccccCC
Q 025653 96 LYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP---QEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER 172 (250)
Q Consensus 96 iialaa~~av~~~GGP~~~~~~GR~D~~~~~---~~~~lP~p~~~~~~l~~~F~~~~Gl~~~e~VaL~GaHtiG~~~~~~ 172 (250)
||++||++||+.+|||.|+|++||+|+.++. ++++||.|+.+++++++.| +++||+++|||||+||||||++||.+
T Consensus 93 ilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F-~~~Gls~~d~VaLsGaHTiG~a~c~~ 171 (253)
T cd00691 93 LWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVF-YRMGFNDQEIVALSGAHTLGRCHKER 171 (253)
T ss_pred HHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHH-HhcCCCHHHHHHhcccceeecccccC
Confidence 9999999999999999999999999999986 6788999999999999999 99999999999999999999999988
Q ss_pred CCCCCCCCCCCcccCcHHHHHhhhccC----CCcccccccccccCCCCcHHHHHHhhhChHHHHHHHHHHHHHHHhCCCC
Q 025653 173 SGFEGPWTRNPLIFDNSYFTYLLTGEK----DGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFA 248 (250)
Q Consensus 173 ~~~~g~~~~tp~~fDN~Yy~~l~~~~~----~gll~l~SD~~L~~d~~t~~~v~~ya~~~~~F~~~F~~Am~Km~~lgv~ 248 (250)
+++.|+|+.||.+|||+||++|+.+.+ ++++.|+||++|+.|++|+++|+.||.|+++|+++|++||+||+++||+
T Consensus 172 ~~~~g~~~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L~sD~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~ 251 (253)
T cd00691 172 SGYDGPWTKNPLKFDNSYFKELLEEDWKLPTPGLLMLPTDKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVP 251 (253)
T ss_pred CCCCCCCCCCCCcccHHHHHHHhcCCCccCcCcceechhhHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCC
Confidence 888889999999999999999999843 3455567999999999999999999999999999999999999999998
Q ss_pred C
Q 025653 249 E 249 (250)
Q Consensus 249 ~ 249 (250)
+
T Consensus 252 ~ 252 (253)
T cd00691 252 F 252 (253)
T ss_pred C
Confidence 5
No 5
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=1.4e-69 Score=490.62 Aligned_cols=229 Identities=28% Similarity=0.420 Sum_probs=208.4
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhhhhhcCCchhhHHHhhhcccCCcccCCCCCCCCCcccch---HHhhccCCCchHHHH
Q 025653 2 TKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLA---AEQAHSANNGLDIAV 78 (250)
Q Consensus 2 ~~~cp~~~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~---~E~~~~~N~gl~~~~ 78 (250)
.++||.+|++|+++|+++ +.+++.++|++|||+|||||+ +||||||++. .|++.++|.+|. +|
T Consensus 31 ~~sCP~aE~iV~~~v~~~------~~~d~~~aa~llRL~FHDCfv-------~GCDaSvLl~~~~~Ek~a~~N~~l~-Gf 96 (324)
T PLN03030 31 STTCPQAESIVRKTVQSH------FQSNPAIAPGLLRMHFHDCFV-------RGCDASILIDGSNTEKTALPNLLLR-GY 96 (324)
T ss_pred hCcCCCHHHHHHHHHHHH------HhhCcccchhhhhhhhhhhee-------cCCceEEeeCCCcccccCCCCcCcc-hH
Confidence 479999999999999999 999999999999999999998 9999999883 699999999985 89
Q ss_pred HHHHHHHHh----CC-CCchhHHHHhhhhhhhhccCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHhcCC
Q 025653 79 RLLEPFKEQ----FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP--QEGRLPDAKQGNDHLRQVFGAQMGL 151 (250)
Q Consensus 79 ~~i~~~k~~----~~-~VS~ADiialaa~~av~~~GGP~~~~~~GR~D~~~~~--~~~~lP~p~~~~~~l~~~F~~~~Gl 151 (250)
++|+.||.. || +|||||||++|||+||.++|||.|+|++||+|++++. ...+||.|+.+++++++.| +++||
T Consensus 97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F-~~~Gl 175 (324)
T PLN03030 97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKF-AAKGL 175 (324)
T ss_pred HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHH-HHcCC
Confidence 999999965 88 8999999999999999999999999999999999874 3458999999999999999 99999
Q ss_pred ChhhHhhhccCccccccccCC-----CCCCC-------------------------C-------CCCCCcccCcHHHHHh
Q 025653 152 SDKDIVALSGGHTLGRCHKER-----SGFEG-------------------------P-------WTRNPLIFDNSYFTYL 194 (250)
Q Consensus 152 ~~~e~VaL~GaHtiG~~~~~~-----~~~~g-------------------------~-------~~~tp~~fDN~Yy~~l 194 (250)
+.+|||+|+||||||++||.. ++|.+ . +..||.+|||+||++|
T Consensus 176 ~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nl 255 (324)
T PLN03030 176 NTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNL 255 (324)
T ss_pred CHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHH
Confidence 999999999999999999952 12111 0 1258999999999999
Q ss_pred hhccCCCcccccccccccCCCCcHHHHHHhhhCh----HHHHHHHHHHHHHHHhCCCCC
Q 025653 195 LTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADE----DAFFADYAEAHLKLSELGFAE 249 (250)
Q Consensus 195 ~~~~~~gll~l~SD~~L~~d~~t~~~v~~ya~~~----~~F~~~F~~Am~Km~~lgv~~ 249 (250)
+.+ +|+|. |||+|+.|++|+++|+.||.|+ +.|+++|++||+|||++||.+
T Consensus 256 l~~--rGlL~--SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlT 310 (324)
T PLN03030 256 KNG--RGILE--SDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKT 310 (324)
T ss_pred Hhc--CCCcC--CchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCC
Confidence 998 79876 9999999999999999999875 599999999999999999865
No 6
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=2.8e-68 Score=480.68 Aligned_cols=229 Identities=36% Similarity=0.581 Sum_probs=209.5
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhhhhhcCCchhhHHHhhhcccCCcccCCCCCCCCCcccc------hHHhhccCCCchH
Q 025653 2 TKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRL------AAEQAHSANNGLD 75 (250)
Q Consensus 2 ~~~cp~~~~~v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~------~~E~~~~~N~gl~ 75 (250)
.++||.+|++|+++|+++ +..+++++|++|||+||||++ +||||||++ .+|+++++|.+|+
T Consensus 8 ~~sCP~~e~iV~~~v~~~------~~~~~~~a~~~lRl~FHDc~v-------~GcDaSill~~~~~~~~E~~~~~N~~l~ 74 (298)
T cd00693 8 SKSCPNAESIVRSVVRAA------VKADPRLAAALLRLHFHDCFV-------RGCDASVLLDSTANNTSEKDAPPNLSLR 74 (298)
T ss_pred cCCCCChHHHHHHHHHHH------HHhCCCcCchhhhhhhHhhhc-------cCcceeEEecCCCCCchhccCCCCCCcc
Confidence 579999999999999999 999999999999999999997 999999986 4699999999995
Q ss_pred HHHHHHHHHHHh----CC-CCchhHHHHhhhhhhhhccCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCHHHHHHHHHHh
Q 025653 76 IAVRLLEPFKEQ----FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ--EGRLPDAKQGNDHLRQVFGAQ 148 (250)
Q Consensus 76 ~~~~~i~~~k~~----~~-~VS~ADiialaa~~av~~~GGP~~~~~~GR~D~~~~~~--~~~lP~p~~~~~~l~~~F~~~ 148 (250)
++++|+.||.. || +|||||||+||+++||+.+|||.|+|++||+|+..+.+ .+.||.|+.+++++++.| ++
T Consensus 75 -g~~~i~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F-~~ 152 (298)
T cd00693 75 -GFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDVGNLPSPFFSVSQLISLF-AS 152 (298)
T ss_pred -hhHHHHHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccccCCCCcccCHHHHHHHH-HH
Confidence 89999999974 77 89999999999999999999999999999999987743 368999999999999999 99
Q ss_pred cCCChhhHhhhccCccccccccC----C-CCCCC--------------------CC----------C-CCCcccCcHHHH
Q 025653 149 MGLSDKDIVALSGGHTLGRCHKE----R-SGFEG--------------------PW----------T-RNPLIFDNSYFT 192 (250)
Q Consensus 149 ~Gl~~~e~VaL~GaHtiG~~~~~----~-~~~~g--------------------~~----------~-~tp~~fDN~Yy~ 192 (250)
+||+++|||||+||||||++||. | ++|.| |+ + .||.+|||+||+
T Consensus 153 ~G~~~~d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~ 232 (298)
T cd00693 153 KGLTVTDLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYK 232 (298)
T ss_pred cCCCHHHheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHH
Confidence 99999999999999999999994 2 23321 12 2 799999999999
Q ss_pred HhhhccCCCcccccccccccCCCCcHHHHHHhhhChHHHHHHHHHHHHHHHhCCCCC
Q 025653 193 YLLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 249 (250)
Q Consensus 193 ~l~~~~~~gll~l~SD~~L~~d~~t~~~v~~ya~~~~~F~~~F~~Am~Km~~lgv~~ 249 (250)
+|+.+ +|+|. ||++|+.|++|+++|+.||.||++|+++|+.||+||+++||.+
T Consensus 233 ~l~~~--~glL~--SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~t 285 (298)
T cd00693 233 NLLAG--RGLLT--SDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLT 285 (298)
T ss_pred HHHhc--ccCcc--CCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCcc
Confidence 99998 78865 9999999999999999999999999999999999999999865
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=2e-63 Score=451.91 Aligned_cols=229 Identities=31% Similarity=0.478 Sum_probs=201.2
Q ss_pred HHHHHhhh-hhcCC---chhhHHHhhhcccCCccc-----CCCCCCCCCcccch--HHhhccCCCchHHHHHHHHHHHHh
Q 025653 19 CKRKLRGF-IAEKN---CAPLMLRIAWHSAGTYDV-----KTKTGGPFGTMRLA--AEQAHSANNGLDIAVRLLEPFKEQ 87 (250)
Q Consensus 19 ~~~~~~~~-~~~~~---~a~~~lRl~FHDc~~~d~-----~~~~gG~dgsi~~~--~E~~~~~N~gl~~~~~~i~~~k~~ 87 (250)
++++|++. ..+.. .|+.+|||+||||++||. ..+.|||||||++. .|+++++|.||+.+++.|..++++
T Consensus 20 v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~~E~~~~~N~gL~~vvd~lk~~~e~ 99 (328)
T cd00692 20 ILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDDIETAFHANIGLDEIVEALRPFHQK 99 (328)
T ss_pred HHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCcccccCCCCCCHHHHHHHHHHHHHh
Confidence 34455544 44544 466799999999999994 57789999999873 599999999998777778777777
Q ss_pred CCCCchhHHHHhhhhhhhh-ccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCChhhHhhhccCcccc
Q 025653 88 FPTISYADLYQLAGVVGVE-VTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLG 166 (250)
Q Consensus 88 ~~~VS~ADiialaa~~av~-~~GGP~~~~~~GR~D~~~~~~~~~lP~p~~~~~~l~~~F~~~~Gl~~~e~VaL~GaHtiG 166 (250)
++ |||||||+|||++||+ +.|||.|+|++||+|+++++++++||.|+.+++++++.| +++||+.+|||||+||||||
T Consensus 100 ~c-VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~~g~LP~p~~sv~~l~~~F-~~~Gf~~~E~VaLsGAHTiG 177 (328)
T cd00692 100 HN-VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAPDGLVPEPFDSVDKILARF-ADAGFSPDELVALLAAHSVA 177 (328)
T ss_pred cC-cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCcccCCCCCCCCHHHHHHHH-HHcCCCHHHHhhhccccccc
Confidence 65 9999999999999999 569999999999999999999999999999999999999 99999999999999999999
Q ss_pred ccccCCCCCCC-CCCCCCcccCcHHHHHhhh-ccC---------------CCcccccccccccCCCCcHHHHHHhhhChH
Q 025653 167 RCHKERSGFEG-PWTRNPLIFDNSYFTYLLT-GEK---------------DGLLQLPSDKALLDDPVFRPLVEKYAADED 229 (250)
Q Consensus 167 ~~~~~~~~~~g-~~~~tp~~fDN~Yy~~l~~-~~~---------------~gll~l~SD~~L~~d~~t~~~v~~ya~~~~ 229 (250)
++|...+.+.| +|+.||.+|||+||++++. +.. +|+++|+||++|+.|++|+++|+.||.||+
T Consensus 178 ~a~~~Dps~~g~p~D~TP~~FDn~Yf~~ll~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~ 257 (328)
T cd00692 178 AQDFVDPSIAGTPFDSTPGVFDTQFFIETLLKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQA 257 (328)
T ss_pred ccCCCCCCCCCCCCCCCcchhcHHHHHHHHHcCCCCCCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHH
Confidence 99975444455 8999999999999999874 321 256778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCC
Q 025653 230 AFFADYAEAHLKLSELGFAE 249 (250)
Q Consensus 230 ~F~~~F~~Am~Km~~lgv~~ 249 (250)
+|+++|+.||+||+++||+.
T Consensus 258 ~f~~~Fa~Am~KLs~lgv~~ 277 (328)
T cd00692 258 KMNAAFAAAMLKLSLLGQDN 277 (328)
T ss_pred HHHHHHHHHHHHHHcCCCCc
Confidence 99999999999999999986
No 8
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=3.8e-59 Score=430.37 Aligned_cols=233 Identities=38% Similarity=0.649 Sum_probs=211.3
Q ss_pred HHHHHHHHHhhhhhcC---------CchhhHHHhhhcccCCcccCCCCCCCC-CcccchHHhhccCCCchHHHHHHHHHH
Q 025653 15 AVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPF 84 (250)
Q Consensus 15 ~v~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~~~~~gG~d-gsi~~~~E~~~~~N~gl~~~~~~i~~~ 84 (250)
.++.+|++|+++++++ .++|.+|||+||++++||.++++||++ |+|++++|.+++.|.||.+++.+|++|
T Consensus 43 d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~pe~~~~~N~gL~~a~~~L~pi 122 (409)
T cd00649 43 DLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFAPLNSWPDNVNLDKARRLLWPI 122 (409)
T ss_pred cHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccccccCcHhhhhHHHHHHHHHHH
Confidence 3577899999999865 699999999999999999999999998 799999999999999999999999999
Q ss_pred HHhCC-CCchhHHHHhhhhhhhhccCCCCCCCCCCCCCCCCCC-------------------------------------
Q 025653 85 KEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP------------------------------------- 126 (250)
Q Consensus 85 k~~~~-~VS~ADiialaa~~av~~~GGP~~~~~~GR~D~~~~~------------------------------------- 126 (250)
|++++ .||+||+|+||+++||+.+|||.|+|.+||.|...+.
T Consensus 123 k~k~~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~a~~mgliyv 202 (409)
T cd00649 123 KQKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLAAVQMGLIYV 202 (409)
T ss_pred HHHcCCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchhhhhcccccc
Confidence 99998 7999999999999999999999999999999997532
Q ss_pred -CCC--CCCCCCCCHHHHHHHHHHhcCCChhhHhhh-ccCccccccccCC------------------------------
Q 025653 127 -QEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKER------------------------------ 172 (250)
Q Consensus 127 -~~~--~lP~p~~~~~~l~~~F~~~~Gl~~~e~VaL-~GaHtiG~~~~~~------------------------------ 172 (250)
|++ .||.|..++.+|++.| .+|||+.+||||| +||||||++||..
T Consensus 203 ~Pegp~gLPdP~~sa~~LR~~F-~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg~dP~~~~~~~~gLgw~~~Cp~g~g 281 (409)
T cd00649 203 NPEGPDGNPDPLAAAKDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGPASHVGPEPEAAPIEQQGLGWKNSYGTGKG 281 (409)
T ss_pred CCCCCCCCCCCccCHHHHHHHH-HHcCCCHHHHeeeccCCcceeecCcccccccCCCCCCcCHHHHHhhcccccCCCCCC
Confidence 233 6999999999999999 9999999999999 5999999999941
Q ss_pred -----CCCCCCCCCCCcccCcHHHHHhhhccC--------------------------------CCcccccccccccCCC
Q 025653 173 -----SGFEGPWTRNPLIFDNSYFTYLLTGEK--------------------------------DGLLQLPSDKALLDDP 215 (250)
Q Consensus 173 -----~~~~g~~~~tp~~fDN~Yy~~l~~~~~--------------------------------~gll~l~SD~~L~~d~ 215 (250)
++++|+|+.||.+|||+||++|+..++ .++.+|+||++|+.|+
T Consensus 282 ~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~~~gmL~SD~aL~~Dp 361 (409)
T cd00649 282 KDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKHAPMMLTTDLALRFDP 361 (409)
T ss_pred CCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCccccccccCcccchhhHhhhcCc
Confidence 357788999999999999999998321 2556778999999999
Q ss_pred CcHHHHHHhhhChHHHHHHHHHHHHHHH--hCCCC
Q 025653 216 VFRPLVEKYAADEDAFFADYAEAHLKLS--ELGFA 248 (250)
Q Consensus 216 ~t~~~v~~ya~~~~~F~~~F~~Am~Km~--~lgv~ 248 (250)
+++.+|++||.|+++|+++|++||.||+ .+|+.
T Consensus 362 ~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~ 396 (409)
T cd00649 362 EYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPK 396 (409)
T ss_pred cHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCch
Confidence 9999999999999999999999999994 66653
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=6.5e-59 Score=412.38 Aligned_cols=226 Identities=46% Similarity=0.740 Sum_probs=204.6
Q ss_pred HHHHHHHHHHHHhhhhhcCCchhhHHHhhhcccCCcccCC-CCCCCCCcccchHHhhccCCCchHHHHHHHHHHHHhCC-
Q 025653 12 YKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFP- 89 (250)
Q Consensus 12 v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~-~~gG~dgsi~~~~E~~~~~N~gl~~~~~~i~~~k~~~~- 89 (250)
|++.|++. +.+++.+++++|||+||||++|+..+ ..|||||||++.+|+++|+|.+|.+++++|++||.+++
T Consensus 3 v~~~l~~~------~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~e~~~~~N~~l~~~~~~l~~ik~~~~~ 76 (255)
T cd00314 3 IKAILEDL------ITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEPELDRPENGGLDKALRALEPIKSAYDG 76 (255)
T ss_pred HHHHHHHH------HHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccccccCcccccHHHHHHHHHHHHHHcCC
Confidence 45555555 55688999999999999999999987 67999999999999999999999889999999999985
Q ss_pred --CCchhHHHHhhhhhhhhcc--CCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCHHHHHHHHHHhcCCChhhHhhhc
Q 025653 90 --TISYADLYQLAGVVGVEVT--GGPDIPFHPGRDDKA-----EPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS 160 (250)
Q Consensus 90 --~VS~ADiialaa~~av~~~--GGP~~~~~~GR~D~~-----~~~~~~~lP~p~~~~~~l~~~F~~~~Gl~~~e~VaL~ 160 (250)
+|||||||++|+++||+.+ |||.|+|++||+|++ .+.|.+.+|.+..+++++++.| .++||+++|||||+
T Consensus 77 ~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F-~~~Gl~~~e~VAL~ 155 (255)
T cd00314 77 GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKF-KRMGLSPSELVALS 155 (255)
T ss_pred CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHH-HHcCCCHHHHHhhc
Confidence 7999999999999999999 999999999999999 4567788999999999999999 89999999999999
Q ss_pred -cCccc-cccccCCCCCC--CCCCCCCcccCcHHHHHhhhccC------------CCcccccccccccCCCCcHHHHHHh
Q 025653 161 -GGHTL-GRCHKERSGFE--GPWTRNPLIFDNSYFTYLLTGEK------------DGLLQLPSDKALLDDPVFRPLVEKY 224 (250)
Q Consensus 161 -GaHti-G~~~~~~~~~~--g~~~~tp~~fDN~Yy~~l~~~~~------------~gll~l~SD~~L~~d~~t~~~v~~y 224 (250)
||||| |++||...+.. ++|+.||.+|||+||++|+.+.+ +++..|+||+.|+.|++|+.+|+.|
T Consensus 156 ~GaHti~G~~~~~~~~~~~~~~~~~tp~~fDN~yy~~l~~~~~~~~~~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~y 235 (255)
T cd00314 156 AGAHTLGGKNHGDLLNYEGSGLWTSTPFTFDNAYFKNLLDMNWEWRVGSPDPDGVKGPGLLPSDYALLSDSETRALVERY 235 (255)
T ss_pred cCCeeccCcccCCCCCcccCCCCCCCCCccchHHHHHHhcCCcccccCCccCCCcccCCCchhhHHHhcCHhHHHHHHHH
Confidence 99999 99999765444 67889999999999999999753 1334567999999999999999999
Q ss_pred hhChHHHHHHHHHHHHHHHh
Q 025653 225 AADEDAFFADYAEAHLKLSE 244 (250)
Q Consensus 225 a~~~~~F~~~F~~Am~Km~~ 244 (250)
|.|+++|+++|++||+||++
T Consensus 236 a~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 236 ASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred HhCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999974
No 10
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=3.7e-59 Score=408.24 Aligned_cols=198 Identities=42% Similarity=0.725 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHHhhhhhcCCchhhHHHhhhcccCCcccCCCCCCCCCcccc-hHHhhccCCCchHHHHHHHHHHHHh---
Q 025653 12 YKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRL-AAEQAHSANNGLDIAVRLLEPFKEQ--- 87 (250)
Q Consensus 12 v~~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~-~~E~~~~~N~gl~~~~~~i~~~k~~--- 87 (250)
||++|+++ +..+++++|+||||+||||++| |||||||++ .+|+++++|.||.+++++|+.||.+
T Consensus 1 Vr~~v~~~------~~~~~~~~~~~lRl~FHDc~~~------~GcDgSil~~~~e~~~~~N~gl~~~~~~i~~ik~~~~~ 68 (230)
T PF00141_consen 1 VRSDVRAA------FKKDPTLAPGLLRLAFHDCFVY------GGCDGSILLFSAEKDAPPNRGLRDGFDVIDPIKAKLEA 68 (230)
T ss_dssp HHHHHHHH------HHHHTTSHHHHHHHHHHHHTTH------TSSSSGGGGSTTGGGSGGGTTHHHHHHHHHHHHHHHCH
T ss_pred CHHHHHHH------HHHCcCccHHHHHHHccccccc------cccccceeccccccccccccCcceeeechhhHHhhhcc
Confidence 56666666 7779999999999999999987 999999976 7899999999999899999999976
Q ss_pred -CC-CCchhHHHHhhhhhhhhccCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHhcCCChhhHhhhccCc
Q 025653 88 -FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGH 163 (250)
Q Consensus 88 -~~-~VS~ADiialaa~~av~~~GGP~~~~~~GR~D~~~~~~~~--~lP~p~~~~~~l~~~F~~~~Gl~~~e~VaL~GaH 163 (250)
|| +|||||||++|+++||+.+|||.|+|++||+|++++++.+ +||.|..+++++++.| +++||+++|||||+|||
T Consensus 69 ~cp~~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F-~~~Gls~~e~VaLsGaH 147 (230)
T PF00141_consen 69 ACPGVVSCADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGASNLPSPTDSVDQLLAFF-ARKGLSAEEMVALSGAH 147 (230)
T ss_dssp HSTTTS-HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHHHHSSTTTSHHHHHHHHH-HHTT--HHHHHHHHGGG
T ss_pred cccCCCCHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccchhhhhh-hccccchhhhcceeccc
Confidence 77 7999999999999999999999999999999999997643 5999999999999999 99999999999999999
Q ss_pred cccccccCCCC---------CC--------------C-CCCCCCcccCcHHHHHhhhccCCCcccccccccccCCCCcHH
Q 025653 164 TLGRCHKERSG---------FE--------------G-PWTRNPLIFDNSYFTYLLTGEKDGLLQLPSDKALLDDPVFRP 219 (250)
Q Consensus 164 tiG~~~~~~~~---------~~--------------g-~~~~tp~~fDN~Yy~~l~~~~~~gll~l~SD~~L~~d~~t~~ 219 (250)
|||.+||.... ++ . +++ ||.+|||+||++|+.+ +|+|. ||++|+.|++|++
T Consensus 148 TiG~~~c~~f~rl~~~~dp~~d~~~~~~~C~~~~~~~~~~d-tp~~fDN~Yy~~ll~~--~gll~--SD~~L~~d~~t~~ 222 (230)
T PF00141_consen 148 TIGRAHCSSFSRLYFPPDPTMDPGYAGQNCNSGGDNGVPLD-TPTVFDNSYYKNLLNG--RGLLP--SDQALLNDPETRP 222 (230)
T ss_dssp GSTEESGGCTGGTSCSSGTTSTHHHHHHSSSTSGCTCEESS-STTS-SSHHHHHHHHT--EEEEH--HHHHHHHSTTHHH
T ss_pred ccccceeccccccccccccccccccceeccCCCcccccccc-CCCcchhHHHHHHhcC--CCcCH--HHHHHhcCHHHHH
Confidence 99999996211 00 0 234 9999999999999998 67765 9999999999999
Q ss_pred HHHHhhhC
Q 025653 220 LVEKYAAD 227 (250)
Q Consensus 220 ~v~~ya~~ 227 (250)
+|++||+|
T Consensus 223 ~V~~yA~d 230 (230)
T PF00141_consen 223 IVERYAQD 230 (230)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhcC
Confidence 99999986
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1e-55 Score=430.72 Aligned_cols=234 Identities=38% Similarity=0.646 Sum_probs=209.3
Q ss_pred HHHHHHH-----HHHHHHhhhhhcC---------CchhhHHHhhhcccCCcccCCCCCCCC-CcccchHHhhccCCCchH
Q 025653 11 DYKKAVE-----KCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLD 75 (250)
Q Consensus 11 ~v~~~v~-----~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~~~~~gG~d-gsi~~~~E~~~~~N~gl~ 75 (250)
+|.++++ .+|++|+++++++ .++|.+|||+||++++||.+++.||++ |+|+|++|.+|+.|.+|+
T Consensus 44 ~y~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~P~~sw~~N~~Ld 123 (716)
T TIGR00198 44 DYAEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFAPLNSWPDNVNLD 123 (716)
T ss_pred cHHHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecccccCchhhhhHH
Confidence 4555554 4899999999875 699999999999999999999999996 799999999999999999
Q ss_pred HHHHHHHHHHHhCC-CCchhHHHHhhhhhhhhccCCCCCCCCCCCCCCCCCC----------------------------
Q 025653 76 IAVRLLEPFKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP---------------------------- 126 (250)
Q Consensus 76 ~~~~~i~~~k~~~~-~VS~ADiialaa~~av~~~GGP~~~~~~GR~D~~~~~---------------------------- 126 (250)
+++++|++||++|| .|||||||+||+++||+.+|||.|+|.+||+|+..+.
T Consensus 124 ka~~lL~pIk~kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~ 203 (716)
T TIGR00198 124 KARRLLWPIKKKYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAA 203 (716)
T ss_pred HHHHHHHHHHHHCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchh
Confidence 99999999999998 7999999999999999999999999999999995321
Q ss_pred ---------CCC--CCCCCCCCHHHHHHHHHHhcCCChhhHhhhc-cCccccccccC-----------------------
Q 025653 127 ---------QEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLGRCHKE----------------------- 171 (250)
Q Consensus 127 ---------~~~--~lP~p~~~~~~l~~~F~~~~Gl~~~e~VaL~-GaHtiG~~~~~----------------------- 171 (250)
|++ .+|.|..++++|++.| .++|||.+|||||+ ||||||++||.
T Consensus 204 ~~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F-~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rlg~dP~~~~~~~~gLg~~ 282 (716)
T TIGR00198 204 TEMGLIYVNPEGPDGHPDPLCTAQDIRTTF-ARMGMNDEETVALIAGGHTVGKCHGAGPAELIGPDPEGAPIEEQGLGWH 282 (716)
T ss_pred hhccccccCcccccCCCCCCCCHHHHHHHH-HHcCCChHHHeeeecCceeccccCCCcccccCCCCCCcCHHHHHHhccc
Confidence 122 6899999999999999 99999999999995 99999999994
Q ss_pred ------------CCCCCCCCCCCCcccCcHHHHHhhhccC------------------------------CCcccccccc
Q 025653 172 ------------RSGFEGPWTRNPLIFDNSYFTYLLTGEK------------------------------DGLLQLPSDK 209 (250)
Q Consensus 172 ------------~~~~~g~~~~tp~~fDN~Yy~~l~~~~~------------------------------~gll~l~SD~ 209 (250)
.++++|+|+.||.+|||+||++|+.+++ ....+|.||+
T Consensus 283 c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~mL~SDl 362 (716)
T TIGR00198 283 NQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPIMLDADL 362 (716)
T ss_pred CCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccccccCccchhH
Confidence 1345688999999999999999997521 1245567999
Q ss_pred cccCCCCcHHHHHHhhhChHHHHHHHHHHHHHHHhC
Q 025653 210 ALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSEL 245 (250)
Q Consensus 210 ~L~~d~~t~~~v~~ya~~~~~F~~~F~~Am~Km~~l 245 (250)
+|..|++++.+|+.||.|++.|+++|++||.||++.
T Consensus 363 aL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~ 398 (716)
T TIGR00198 363 ALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHR 398 (716)
T ss_pred HhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHccc
Confidence 999999999999999999999999999999999854
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=9.1e-54 Score=414.99 Aligned_cols=229 Identities=38% Similarity=0.639 Sum_probs=207.3
Q ss_pred HHHHHHHHHhhhhhcC---------CchhhHHHhhhcccCCcccCCCCCCCC-CcccchHHhhccCCCchHHHHHHHHHH
Q 025653 15 AVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPF 84 (250)
Q Consensus 15 ~v~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~~~~~gG~d-gsi~~~~E~~~~~N~gl~~~~~~i~~~ 84 (250)
.++.+|++|+++++++ .++|.+|||+||++++||.+++.||++ |+|+|++|.+|+.|.||.+++++|++|
T Consensus 55 d~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~pe~~w~~N~gL~ka~~~L~pi 134 (726)
T PRK15061 55 DLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNVNLDKARRLLWPI 134 (726)
T ss_pred hHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCcccccchhhhhHHHHHHHHHHH
Confidence 4566899999999875 689999999999999999999999997 799999999999999999999999999
Q ss_pred HHhCC-CCchhHHHHhhhhhhhhccCCCCCCCCCCCCCCCCCCC------------------------------------
Q 025653 85 KEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ------------------------------------ 127 (250)
Q Consensus 85 k~~~~-~VS~ADiialaa~~av~~~GGP~~~~~~GR~D~~~~~~------------------------------------ 127 (250)
|++++ .||+||+|+||+.+|||.+|||.|+|.+||.|...+..
T Consensus 135 k~ky~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl~a~~mgliy 214 (726)
T PRK15061 135 KQKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPLAAVQMGLIY 214 (726)
T ss_pred HHHhCCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccchhhhhcccee
Confidence 99997 79999999999999999999999999999999865321
Q ss_pred ---C--CCCCCCCCCHHHHHHHHHHhcCCChhhHhhhc-cCccccccccC------------------------------
Q 025653 128 ---E--GRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLGRCHKE------------------------------ 171 (250)
Q Consensus 128 ---~--~~lP~p~~~~~~l~~~F~~~~Gl~~~e~VaL~-GaHtiG~~~~~------------------------------ 171 (250)
+ .-+|.|..++.+|+..| .+|||+.+|||||+ ||||||++||.
T Consensus 215 vnpegp~glPdP~~sa~~lR~tF-~RMGmnDeEtVALiaGgHT~GkaHca~~~~rlgpdP~~a~~~~qgLgw~~~c~~g~ 293 (726)
T PRK15061 215 VNPEGPNGNPDPLAAARDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGDASHVGPEPEAAPIEEQGLGWKNSYGSGK 293 (726)
T ss_pred cCCCCCCCCCCcccCHHHHHHHH-HHcCCCHHHheeeccCCceeeeCCCcCcccccCCCCCcCHHHHHhccccccCCCCC
Confidence 1 12799999999999999 99999999999995 99999999994
Q ss_pred -----CCCCCCCCCCCCcccCcHHHHHhhhccC--------------------------------CCcccccccccccCC
Q 025653 172 -----RSGFEGPWTRNPLIFDNSYFTYLLTGEK--------------------------------DGLLQLPSDKALLDD 214 (250)
Q Consensus 172 -----~~~~~g~~~~tp~~fDN~Yy~~l~~~~~--------------------------------~gll~l~SD~~L~~d 214 (250)
.++++|+|+.||.+|||+||++|+.+++ .++.+|.||++|..|
T Consensus 294 g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~~~~~MLtSD~AL~~D 373 (726)
T PRK15061 294 GADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKKHAPTMLTTDLALRFD 373 (726)
T ss_pred CCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCcccccccccCcccccccHHhhcC
Confidence 1356788999999999999999998621 135678899999999
Q ss_pred CCcHHHHHHhhhChHHHHHHHHHHHHHHHh
Q 025653 215 PVFRPLVEKYAADEDAFFADYAEAHLKLSE 244 (250)
Q Consensus 215 ~~t~~~v~~ya~~~~~F~~~F~~Am~Km~~ 244 (250)
+.++.+|++|+.|+++|+++|++||.||++
T Consensus 374 P~~r~iV~~fA~d~~~F~~~FA~A~~KL~h 403 (726)
T PRK15061 374 PEYEKISRRFLENPEEFADAFARAWFKLTH 403 (726)
T ss_pred CcHHHHHHHHhcCHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999965
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=2.6e-53 Score=373.42 Aligned_cols=209 Identities=28% Similarity=0.432 Sum_probs=182.2
Q ss_pred hcCCchhhHHHhhhcccCCcccCCCCCCCCCcccchHHhhccCCCchH--HHHHHHHHHHHhCCCCchhHHHHhhhhhhh
Q 025653 28 AEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLD--IAVRLLEPFKEQFPTISYADLYQLAGVVGV 105 (250)
Q Consensus 28 ~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~~E~~~~~N~gl~--~~~~~i~~~k~~~~~VS~ADiialaa~~av 105 (250)
.++.+++.+|||+||||++||...+.|||||||++ |..+++|.|+. ..++.++.|+. ++||||||||||+++||
T Consensus 37 ~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIll--e~~~~En~G~~~n~~l~~~~~i~~--~~VScADiialAa~~AV 112 (264)
T cd08201 37 PGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQY--ELDRPENIGSGFNTTLNFFVNFYS--PRSSMADLIAMGVVTSV 112 (264)
T ss_pred CCccHHHHHHHHHHHhhcCcccCCCCCCCCcceee--cCCChhhccCchhhccccceeecc--CccCHHHHHHHHHHHHH
Confidence 46678999999999999999999999999999998 56778888875 23344444432 48999999999999999
Q ss_pred hccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCChhhHhhhcc-CccccccccCCC------CCC--
Q 025653 106 EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSG-GHTLGRCHKERS------GFE-- 176 (250)
Q Consensus 106 ~~~GGP~~~~~~GR~D~~~~~~~~~lP~p~~~~~~l~~~F~~~~Gl~~~e~VaL~G-aHtiG~~~~~~~------~~~-- 176 (250)
+.+|||.|+|++||+|++++++.+ ||.|+.+++++++.| +++||+++|||+|+| |||||++||... ++.
T Consensus 113 ~~~GGP~i~v~~GR~Da~~s~~~g-lP~P~~~v~~l~~~F-a~~Gfs~~DmVaLsggaHTiG~ahc~~f~~~~~~g~~~~ 190 (264)
T cd08201 113 ASCGGPVVPFRAGRIDATEAGQAG-VPEPQTDLGTTTESF-RRQGFSTSEMIALVACGHTLGGVHSEDFPEIVPPGSVPD 190 (264)
T ss_pred HHcCCCeecccccCCCcccccccc-CCCCccCHHHHHHHH-HHcCCChHHHheeecCCeeeeecccccchhhcCCccccC
Confidence 999999999999999999998886 999999999999999 999999999999995 999999999764 333
Q ss_pred C--CCCCCCcccCcHHHHHhhhccCCCccc------ccccccccCCCCcHHHHHHhhhChHHHHHHHHHHHHHHHh
Q 025653 177 G--PWTRNPLIFDNSYFTYLLTGEKDGLLQ------LPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSE 244 (250)
Q Consensus 177 g--~~~~tp~~fDN~Yy~~l~~~~~~gll~------l~SD~~L~~d~~t~~~v~~ya~~~~~F~~~F~~Am~Km~~ 244 (250)
+ +|++||.+|||+||.++++|+++|+|+ +.||..++....... ++..| +++.|.+.++..++||++
T Consensus 191 ~~~p~dstp~~FDn~~f~E~l~g~~~~~L~~~~~~~~~sd~r~f~~d~n~t-~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 191 TVLQFFDTTIQFDNKVVTEYLSGTTNNPLVVGPNNTTNSDLRIFSSDGNVT-MNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred CCCCCCCCccccchHHHHHHhcCCCCCceeecCCCCccchhhheecCccHH-HHHhc-ChHHHHHHHHHHHHHHhC
Confidence 3 899999999999999999998888875 468999988776644 46677 799999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=7.3e-50 Score=355.57 Aligned_cols=227 Identities=28% Similarity=0.437 Sum_probs=196.2
Q ss_pred HHHHHHHHHHhhhhhcCCchhhHHHhhhcccCCcccCCCCCCCCCc-ccchHHhhccCCCc--hHHHHHHHHHHHHhCC-
Q 025653 14 KAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSANNG--LDIAVRLLEPFKEQFP- 89 (250)
Q Consensus 14 ~~v~~~~~~~~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgs-i~~~~E~~~~~N~g--l~~~~~~i~~~k~~~~- 89 (250)
+.|+.+|++ ++....+++.+|||+||++++||.+++.||+||+ |++++|++|+.|.+ |.+++.+|++||.++|
T Consensus 14 ~di~~lk~~---i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 14 ADIAALKAK---ILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLAPQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHH---HHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCccccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 344444444 5556678999999999999999999999999986 99999999999999 9999999999999997
Q ss_pred ------CCchhHHHHhhhhhhhhccCC-----CCCCCCCCCCCCCCCCC--C---CCCCCCCC------------CHHHH
Q 025653 90 ------TISYADLYQLAGVVGVEVTGG-----PDIPFHPGRDDKAEPPQ--E---GRLPDAKQ------------GNDHL 141 (250)
Q Consensus 90 ------~VS~ADiialaa~~av~~~GG-----P~~~~~~GR~D~~~~~~--~---~~lP~p~~------------~~~~l 141 (250)
.||+||+|+||+.+|||.+|| |.|+|.+||.|.+.+.. + .++|.+.. ..+.|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 799999999999999999999 99999999999988642 2 24564432 23679
Q ss_pred HHHHHHhcCCChhhHhhhccCc-cccccccCCCCCCCCCCCCCcccCcHHHHHhhhcc--C----------------CCc
Q 025653 142 RQVFGAQMGLSDKDIVALSGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTYLLTGE--K----------------DGL 202 (250)
Q Consensus 142 ~~~F~~~~Gl~~~e~VaL~GaH-tiG~~~~~~~~~~g~~~~tp~~fDN~Yy~~l~~~~--~----------------~gl 202 (250)
++.| .++|||++|||||+||| ++|.+|. ++ +.|+|+.+|.+|||.||++|++.. + .|.
T Consensus 171 rd~f-~rlglsd~EmvaL~Gg~r~lG~~~~-~s-~~G~wT~~p~~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~ 247 (297)
T cd08200 171 VDKA-QLLTLTAPEMTVLVGGLRVLGANYG-GS-KHGVFTDRPGVLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGE 247 (297)
T ss_pred HHHH-HhCCCChHHHhheecchhhcccCCC-CC-CCCCCcCCCCccccHHHHHHhcccceeeecCCCCCceeeccCCCCc
Confidence 9999 99999999999999998 7999997 45 469999999999999999999631 0 122
Q ss_pred c---cccccccccCCCCcHHHHHHhhhC--hHHHHHHHHHHHHHHHhCC
Q 025653 203 L---QLPSDKALLDDPVFRPLVEKYAAD--EDAFFADYAEAHLKLSELG 246 (250)
Q Consensus 203 l---~l~SD~~L~~d~~t~~~v~~ya~~--~~~F~~~F~~Am~Km~~lg 246 (250)
+ ++++|++|.+|++.|++|+.||+| +++|++||++||.||+++.
T Consensus 248 ~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klmeld 296 (297)
T cd08200 248 VKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMNLD 296 (297)
T ss_pred eeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhcC
Confidence 2 378999999999999999999999 9999999999999999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.6e-44 Score=352.30 Aligned_cols=218 Identities=28% Similarity=0.441 Sum_probs=190.4
Q ss_pred hhhcCCchhhHHHhhhcccCCcccCCCCCCCCCc-ccchHHhhccCC--CchHHHHHHHHHHHHhCC--CCchhHHHHhh
Q 025653 26 FIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSAN--NGLDIAVRLLEPFKEQFP--TISYADLYQLA 100 (250)
Q Consensus 26 ~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgs-i~~~~E~~~~~N--~gl~~~~~~i~~~k~~~~--~VS~ADiiala 100 (250)
++.....++.|||++||++.+||.++++||+||+ |++++|++|+.| .||..++.+|++||+++| .||+||+|+||
T Consensus 441 i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~pe~~w~~N~p~gL~~vl~~Le~Ik~~f~~~~vS~ADLivLa 520 (716)
T TIGR00198 441 ILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLEPQKNWPVNEPTRLAKVLAVLEKIQAEFAKGPVSLADLIVLG 520 (716)
T ss_pred HHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecchhcCcccCCHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHH
Confidence 4566678899999999999999999999999986 999999999999 899999999999999999 89999999999
Q ss_pred hhhhhhcc---CCC--CCCCCCCCCCCCCCC--CCCCCC---CC------------CCCHHHHHHHHHHhcCCChhhHhh
Q 025653 101 GVVGVEVT---GGP--DIPFHPGRDDKAEPP--QEGRLP---DA------------KQGNDHLRQVFGAQMGLSDKDIVA 158 (250)
Q Consensus 101 a~~av~~~---GGP--~~~~~~GR~D~~~~~--~~~~lP---~p------------~~~~~~l~~~F~~~~Gl~~~e~Va 158 (250)
+.+|||.+ ||| .|+|.+||.|++... +++..| .+ ....+.|++.| .++|||..||||
T Consensus 521 G~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td~~~~~~l~p~adgfRn~~~~~~~~~~~~~l~d~a-~~lglt~~Emva 599 (716)
T TIGR00198 521 GGAAVEKAALDAGISVNVPFLPGRVDATQAMTDAESFTPLEPIADGFRNYLKRDYAVTPEELLLDKA-QLLTLTAPEMTV 599 (716)
T ss_pred HHHHHHHHHHhCCCCcccCcCCCCCccccCCCCccccccCCCCCcccchhccccccCCHHHHHHHHH-HhCCCChHHHHh
Confidence 99999998 897 689999999998863 332222 11 12335589999 999999999999
Q ss_pred hccCc-cccccccCCCCCCCCCCCCCcccCcHHHHHhhhcc--C----------------CCcccc---cccccccCCCC
Q 025653 159 LSGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTYLLTGE--K----------------DGLLQL---PSDKALLDDPV 216 (250)
Q Consensus 159 L~GaH-tiG~~~~~~~~~~g~~~~tp~~fDN~Yy~~l~~~~--~----------------~gll~l---~SD~~L~~d~~ 216 (250)
|+||| ++|++|.. + +.|+|+.+|.+|||.||++|++.. + .|.+++ ++|++|.+|++
T Consensus 600 L~Gg~r~lG~~~~~-s-~~G~~T~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~ 677 (716)
T TIGR00198 600 LIGGMRVLGANHGG-S-KHGVFTDRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSI 677 (716)
T ss_pred eecchhhccccCCC-C-CCCCCcCCCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHH
Confidence 99995 99999984 3 479999999999999999999731 1 244444 78999999999
Q ss_pred cHHHHHHhhhCh--HHHHHHHHHHHHHHHhCC
Q 025653 217 FRPLVEKYAADE--DAFFADYAEAHLKLSELG 246 (250)
Q Consensus 217 t~~~v~~ya~~~--~~F~~~F~~Am~Km~~lg 246 (250)
.|.+|+.||+|+ ++|++||++||.|++++|
T Consensus 678 lra~aE~YA~dd~~~~F~~DF~~Aw~Klm~ld 709 (716)
T TIGR00198 678 LRAVAEVYAQDDAREKFVKDFVAAWTKVMNLD 709 (716)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHhCC
Confidence 999999999997 999999999999999987
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=1.3e-43 Score=344.36 Aligned_cols=218 Identities=29% Similarity=0.458 Sum_probs=190.8
Q ss_pred hhhcCCchhhHHHhhhcccCCcccCCCCCCCCCc-ccchHHhhccCCC--chHHHHHHHHHHHHhC-------CCCchhH
Q 025653 26 FIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSANN--GLDIAVRLLEPFKEQF-------PTISYAD 95 (250)
Q Consensus 26 ~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgs-i~~~~E~~~~~N~--gl~~~~~~i~~~k~~~-------~~VS~AD 95 (250)
++...-..+.|||++||++.+||.++++||+||+ |++++|++|+.|+ +|..++.+|++||+++ |.||+||
T Consensus 448 i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~~~~~~~~vS~AD 527 (726)
T PRK15061 448 ILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNEPAQLAKVLAVLEGIQAEFNAAQSGGKKVSLAD 527 (726)
T ss_pred HHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecccccCccccCHHHHHHHHHHHHHHHHHHhhccCCCCceeHHH
Confidence 4555667899999999999999999999999986 9999999999999 9999999999999997 6799999
Q ss_pred HHHhhhhhhhhcc---CC--CCCCCCCCCCCCCCCCC--C---CCCCCCC------------CCHHHHHHHHHHhcCCCh
Q 025653 96 LYQLAGVVGVEVT---GG--PDIPFHPGRDDKAEPPQ--E---GRLPDAK------------QGNDHLRQVFGAQMGLSD 153 (250)
Q Consensus 96 iialaa~~av~~~---GG--P~~~~~~GR~D~~~~~~--~---~~lP~p~------------~~~~~l~~~F~~~~Gl~~ 153 (250)
+|+||+.+|||.+ || |.|+|.+||.|++.... + .++|... ...+.|++.| .++|||+
T Consensus 528 LivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~~~~~~~e~~L~d~a-~~lglt~ 606 (726)
T PRK15061 528 LIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKKGYSVSPEELLVDKA-QLLTLTA 606 (726)
T ss_pred HHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccccCCCCHHHHHHHHH-HhCCCCh
Confidence 9999999999998 57 99999999999988642 2 2567543 1236799999 9999999
Q ss_pred hhHhhhccCc-cccccccCCCCCCCCCCCCCcccCcHHHHHhhhcc--C----------------CCccc---ccccccc
Q 025653 154 KDIVALSGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTYLLTGE--K----------------DGLLQ---LPSDKAL 211 (250)
Q Consensus 154 ~e~VaL~GaH-tiG~~~~~~~~~~g~~~~tp~~fDN~Yy~~l~~~~--~----------------~gll~---l~SD~~L 211 (250)
.|||||+||| ++|.+|. ++ +.|+|+.+|.+|||.||++|++.. + .|.++ +++|++|
T Consensus 607 ~EmvaL~Gg~r~Lg~~~~-~S-~~G~~T~~p~~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvf 684 (726)
T PRK15061 607 PEMTVLVGGLRVLGANYG-GS-KHGVFTDRPGVLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVF 684 (726)
T ss_pred HHHhheecchhhcccCCC-CC-CCCCCcCCCCccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheec
Confidence 9999999997 7899885 44 579999999999999999999631 0 13333 4789999
Q ss_pred cCCCCcHHHHHHhhhC--hHHHHHHHHHHHHHHHhCC
Q 025653 212 LDDPVFRPLVEKYAAD--EDAFFADYAEAHLKLSELG 246 (250)
Q Consensus 212 ~~d~~t~~~v~~ya~~--~~~F~~~F~~Am~Km~~lg 246 (250)
.+|++.|.+|+.||+| +++|++||++||.|+++++
T Consensus 685 gsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvmeld 721 (726)
T PRK15061 685 GSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVMNLD 721 (726)
T ss_pred ccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCC
Confidence 9999999999999999 9999999999999999987
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-39 Score=300.38 Aligned_cols=232 Identities=38% Similarity=0.644 Sum_probs=206.6
Q ss_pred HHHHHHHHhhhhhcC---------CchhhHHHhhhcccCCcccCCCCCCCC-CcccchHHhhccCCCchHHHHHHHHHHH
Q 025653 16 VEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFK 85 (250)
Q Consensus 16 v~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~~~d~~~~~gG~d-gsi~~~~E~~~~~N~gl~~~~~~i~~~k 85 (250)
+...|++|+++.+++ ...|.+|||+||-+++|+..++.||+. |..+|.++.+||.|.+|++++++|++||
T Consensus 69 ~~Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G~qRFaPlnSWPDN~nLDKarRLLWPIK 148 (730)
T COG0376 69 LAAVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNANLDKARRLLWPIK 148 (730)
T ss_pred HHHHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCCceecccccCCCcccchHHHHHHhhhHh
Confidence 445789999998876 378999999999999999999999987 6999999999999999999999999999
Q ss_pred HhCC-CCchhHHHHhhhhhhhhccCCCCCCCCCCCCCCCCCCC-------------------------------------
Q 025653 86 EQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ------------------------------------- 127 (250)
Q Consensus 86 ~~~~-~VS~ADiialaa~~av~~~GGP~~~~~~GR~D~~~~~~------------------------------------- 127 (250)
++|+ .||+||+|+|++.+|++.+|++++.|..||.|-..+..
T Consensus 149 kKYG~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqMGLIYVN 228 (730)
T COG0376 149 KKYGRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQMGLIYVN 228 (730)
T ss_pred HhhcccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhheeeeEEeC
Confidence 9998 89999999999999999999999999999999877632
Q ss_pred -C--CCCCCCCCCHHHHHHHHHHhcCCChhhHhhhc-cCccccccccCC-------------------------------
Q 025653 128 -E--GRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLGRCHKER------------------------------- 172 (250)
Q Consensus 128 -~--~~lP~p~~~~~~l~~~F~~~~Gl~~~e~VaL~-GaHtiG~~~~~~------------------------------- 172 (250)
+ +..|+|..+..+++..| ++|+++.+|.|||+ ||||+|.+|...
T Consensus 229 PEGpng~PDpl~aA~dIRetF-aRMaMNDeETVALiaGGHtfGKtHGag~a~~vg~ePe~a~ie~qGlGW~~~~g~G~G~ 307 (730)
T COG0376 229 PEGPNGNPDPLAAARDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGPASNVGPEPEAAPIEQQGLGWANTYGSGKGP 307 (730)
T ss_pred CCCCCCCCChhhhHHHHHHHH-HHhcCCcHhhhhhhhcccccccccCCCchhhcCCCccccchhhhccccccccCCCcCc
Confidence 1 23678888889999999 99999999999997 799999999731
Q ss_pred ----CCCCCCCCCCCcccCcHHHHHhhhccC-------------------------------CCcccccccccccCCCCc
Q 025653 173 ----SGFEGPWTRNPLIFDNSYFTYLLTGEK-------------------------------DGLLQLPSDKALLDDPVF 217 (250)
Q Consensus 173 ----~~~~g~~~~tp~~fDN~Yy~~l~~~~~-------------------------------~gll~l~SD~~L~~d~~t 217 (250)
+|.+++|+.+|+.|||+||.+|+..++ ..+.||.+|++|--||..
T Consensus 308 dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~MlttDlaLr~DP~Y 387 (730)
T COG0376 308 DTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTTDLALRFDPEY 387 (730)
T ss_pred ccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeeccchhhhcChHH
Confidence 234568999999999999999997541 146788999999999999
Q ss_pred HHHHHHhhhChHHHHHHHHHHHHHHHhCCCC
Q 025653 218 RPLVEKYAADEDAFFADYAEAHLKLSELGFA 248 (250)
Q Consensus 218 ~~~v~~ya~~~~~F~~~F~~Am~Km~~lgv~ 248 (250)
+.+.++|..|++.|.+.|++||.||..-..-
T Consensus 388 ~kIs~rf~e~pd~F~~~FArAWfKLtHRDMG 418 (730)
T COG0376 388 EKISRRFLEDPDEFADAFARAWFKLTHRDMG 418 (730)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHhhccCC
Confidence 9999999999999999999999999876543
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.88 E-value=4.4e-22 Score=186.92 Aligned_cols=218 Identities=29% Similarity=0.446 Sum_probs=176.4
Q ss_pred hhhcCCchhhHHHhhhcccCCcccCCCCCCCCC-cccchHHhhccCCC--chHHHHHHHHHHHHhCC-CCchhHHHHhhh
Q 025653 26 FIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFG-TMRLAAEQAHSANN--GLDIAVRLLEPFKEQFP-TISYADLYQLAG 101 (250)
Q Consensus 26 ~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dg-si~~~~E~~~~~N~--gl~~~~~~i~~~k~~~~-~VS~ADiialaa 101 (250)
|+.+.-..+.++-.+|..+.+|..|+..||+|| .|++.+.++|+.|. .|.+++.+++.|++++. .||.||+|+|++
T Consensus 458 IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLaPqkdWevN~P~~l~kvl~~le~iq~~fnkkvSlADlIVL~G 537 (730)
T COG0376 458 ILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNQPAELAKVLAVLEKIQKEFNKKVSLADLIVLGG 537 (730)
T ss_pred HHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeecccccCCCCCHHHHHHHHHHHHHHHHHhcCccchhHheeecc
Confidence 566666788999999999999999999999997 89999999999995 67789999999999987 699999999999
Q ss_pred hhhhhcc---CC--CCCCCCCCCCCCCCCCC--C---CCCCC-----------CCCCHH-HHHHHHHHhcCCChhhHhhh
Q 025653 102 VVGVEVT---GG--PDIPFHPGRDDKAEPPQ--E---GRLPD-----------AKQGND-HLRQVFGAQMGLSDKDIVAL 159 (250)
Q Consensus 102 ~~av~~~---GG--P~~~~~~GR~D~~~~~~--~---~~lP~-----------p~~~~~-~l~~~F~~~~Gl~~~e~VaL 159 (250)
..+|+.+ +| -.+||.+||.|+++... + -+-|- ...+.+ -|++.- +.++|+..||++|
T Consensus 538 ~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvDkA-qlL~LtapemtVL 616 (730)
T COG0376 538 NAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVDKA-QLLTLTAPEMTVL 616 (730)
T ss_pred hHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHHHH-HHhccCCccceEE
Confidence 9999974 34 46889999999988631 1 01111 112333 377888 8999999999999
Q ss_pred ccCc-cccccccCCCCCCCCCCCCCcccCcHHHHHhhhcc------------------CCCccc---ccccccccCCCCc
Q 025653 160 SGGH-TLGRCHKERSGFEGPWTRNPLIFDNSYFTYLLTGE------------------KDGLLQ---LPSDKALLDDPVF 217 (250)
Q Consensus 160 ~GaH-tiG~~~~~~~~~~g~~~~tp~~fDN~Yy~~l~~~~------------------~~gll~---l~SD~~L~~d~~t 217 (250)
+||- .+|.-+.. .-+|.++..|.++.|.||.||+... +.|.+. ...|..+-+++..
T Consensus 617 iGGlRvLg~n~g~--s~~GVfT~~pg~LtndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~L 694 (730)
T COG0376 617 IGGLRVLGANYGG--SKHGVFTDRPGVLTNDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSEL 694 (730)
T ss_pred EcceEeeccCCCC--CccceeccCcccccchhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHH
Confidence 9987 45544431 1368899999999999999999752 113221 2489999999999
Q ss_pred HHHHHHhhhC--hHHHHHHHHHHHHHHHhCC
Q 025653 218 RPLVEKYAAD--EDAFFADYAEAHLKLSELG 246 (250)
Q Consensus 218 ~~~v~~ya~~--~~~F~~~F~~Am~Km~~lg 246 (250)
|.+.+.||++ +++|.+||+.||.|..++.
T Consensus 695 RA~aEVYa~dda~ekFv~DFvaaw~kVMn~D 725 (730)
T COG0376 695 RALAEVYASDDAKEKFVKDFVAAWTKVMNLD 725 (730)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHhccc
Confidence 9999999986 8999999999999998763
No 19
>PF08383 Maf_N: Maf N-terminal region; InterPro: IPR013592 This region is found in various leucine zipper transcription factors of the Maf family. These are implicated in the regulation of insulin gene expression [], in erythroid differentiation [], and in differentiation of the neuroretina [].
Probab=43.71 E-value=16 Score=22.56 Aligned_cols=15 Identities=47% Similarity=0.749 Sum_probs=12.5
Q ss_pred HhcCCChhhHh-hhcc
Q 025653 147 AQMGLSDKDIV-ALSG 161 (250)
Q Consensus 147 ~~~Gl~~~e~V-aL~G 161 (250)
...||+++|.| ||+|
T Consensus 19 e~l~LtpEDAvEaLi~ 34 (35)
T PF08383_consen 19 EALGLTPEDAVEALIG 34 (35)
T ss_pred hhcCCCHHHHHHHHhc
Confidence 66799999999 7776
No 20
>cd07922 CarBa CarBa is the A subunit of 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. CarBa is the A subunit of 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. 2-aminophenol 1,6-dioxygenase is a key enzyme in the carbazole degradation pathway isolated from bacterial strains with carbazole degradation ability. The enzyme is a heterotetramer composed of two A and two B subunits. CarB belongs to the class III extradiol dioxygenase family, composed of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Although the enzyme was originally isolated as a meta-cleavage enzyme for 2'-aminobiphenyl-2,3-diol involved in carbazole degradation, the enzyme has also shown high specificity for 2,3-dihydroxybiphenyl.
Probab=41.00 E-value=18 Score=26.68 Aligned_cols=31 Identities=26% Similarity=0.543 Sum_probs=21.9
Q ss_pred HHHHHhhhChHHHHHHHH-----------HHHHHHHhCCCCC
Q 025653 219 PLVEKYAADEDAFFADYA-----------EAHLKLSELGFAE 249 (250)
Q Consensus 219 ~~v~~ya~~~~~F~~~F~-----------~Am~Km~~lgv~~ 249 (250)
.+.++|..|++.+++.|. .-|.+|..+||+|
T Consensus 18 ~~rerF~~DPea~~~~~gLt~eE~~aL~~~D~~~L~~lGvhp 59 (81)
T cd07922 18 GLIERFQDDPSAVFEEYGLTPAERAALREGTFGALTSIGVHP 59 (81)
T ss_pred HHHHHHHHCHHHHHHHcCCCHHHHHHHHccCHHHHHHcCCCH
Confidence 344667788888877772 3467888888875
No 21
>PRK12346 transaldolase A; Provisional
Probab=36.55 E-value=43 Score=30.97 Aligned_cols=86 Identities=15% Similarity=0.108 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhCCCCchhHHHHhhhhhhhh--ccCCCCCCCCCCCCCCCCCC--CCCCC-CCCC---CCHHHHHHHHHHh
Q 025653 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPP--QEGRL-PDAK---QGNDHLRQVFGAQ 148 (250)
Q Consensus 77 ~~~~i~~~k~~~~~VS~ADiialaa~~av~--~~GGP~~~~~~GR~D~~~~~--~~~~l-P~p~---~~~~~l~~~F~~~ 148 (250)
|+..+..++++ .|+|-=.+.+....++. .+|-..+..++||.|...-. +...+ |... ..+.++.+.| ++
T Consensus 138 Gi~A~~~L~~~--GI~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~-k~ 214 (316)
T PRK12346 138 GIRAAEELEKE--GINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYY-KQ 214 (316)
T ss_pred HHHHHHHHHHC--CCceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccccccccccCCChHHHHHHHHHHH-HH
Confidence 55555555543 34444444455444443 36888899999999875321 11111 2222 2356677888 78
Q ss_pred cCCC----------hhhHhhhccCccc
Q 025653 149 MGLS----------DKDIVALSGGHTL 165 (250)
Q Consensus 149 ~Gl~----------~~e~VaL~GaHti 165 (250)
.|+. .+|+.+|.|+|.+
T Consensus 215 ~~~~T~Vm~ASfRn~~qi~alaG~d~l 241 (316)
T PRK12346 215 HRYETIVMGASFRRTEQILALAGCDRL 241 (316)
T ss_pred cCCCcEEEecccCCHHHHHHHhCCCEE
Confidence 7754 6788888998844
No 22
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.
Probab=33.90 E-value=51 Score=30.40 Aligned_cols=84 Identities=14% Similarity=0.133 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhCCCCchhHHHHhhhhhhhh--ccCCCCCCCCCCCCCCCCCCCCC--CCCC----CCCCHHHHHHHHHHh
Q 025653 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQEG--RLPD----AKQGNDHLRQVFGAQ 148 (250)
Q Consensus 77 ~~~~i~~~k~~~~~VS~ADiialaa~~av~--~~GGP~~~~~~GR~D~~~~~~~~--~lP~----p~~~~~~l~~~F~~~ 148 (250)
|+..+..++++ .|+|-=.+.+....|+. .+|-..+..++||.|-..-...+ ..+. +-..+.++.+.| ++
T Consensus 137 Gi~A~~~L~~~--GI~vn~TlvFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~d~Gv~~v~~i~~~~-~~ 213 (313)
T cd00957 137 GIQAAKQLEKE--GIHCNLTLLFSFAQAVACAEAGVTLISPFVGRILDWYKKHSGDKAYTAEEDPGVASVKKIYNYY-KK 213 (313)
T ss_pred HHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEeecchHHHhhhhccccccCCccCCcHHHHHHHHHHHH-HH
Confidence 55555555543 34443334444444433 35778889999998865321111 1111 112356677888 88
Q ss_pred cCCC----------hhhHhhhccCc
Q 025653 149 MGLS----------DKDIVALSGGH 163 (250)
Q Consensus 149 ~Gl~----------~~e~VaL~GaH 163 (250)
.|+. ..|+.+|.|+|
T Consensus 214 ~~~~T~vmaASfRn~~~v~~laG~d 238 (313)
T cd00957 214 FGYKTKVMGASFRNIGQILALAGCD 238 (313)
T ss_pred cCCCcEEEecccCCHHHHHHHhCCC
Confidence 8875 56777777777
No 23
>PTZ00411 transaldolase-like protein; Provisional
Probab=32.02 E-value=61 Score=30.16 Aligned_cols=86 Identities=14% Similarity=0.137 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhCCCCchhHHHHhhhhhhhh--ccCCCCCCCCCCCCCCCCCCCC---CCCCCCCC---CHHHHHHHHHHh
Q 025653 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQE---GRLPDAKQ---GNDHLRQVFGAQ 148 (250)
Q Consensus 77 ~~~~i~~~k~~~~~VS~ADiialaa~~av~--~~GGP~~~~~~GR~D~~~~~~~---~~lP~p~~---~~~~l~~~F~~~ 148 (250)
|+..+..++++ .|.|-=.+.+....|+. .+|-..+..++||.+...-.+. ...+.... .+.++.+.| +.
T Consensus 149 Gi~Aa~~L~~e--GI~~N~TlvFS~~QA~aaaeAGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~-k~ 225 (333)
T PTZ00411 149 GIQAAKALEKE--GIHCNLTLLFSFAQAVACAQAGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYY-KK 225 (333)
T ss_pred HHHHHHHHHHC--CCceeEeEecCHHHHHHHHHcCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHH-HH
Confidence 55555555543 23333223333333333 3577888999999965432211 11122222 346677788 87
Q ss_pred cCC----------ChhhHhhhccCccc
Q 025653 149 MGL----------SDKDIVALSGGHTL 165 (250)
Q Consensus 149 ~Gl----------~~~e~VaL~GaHti 165 (250)
.|+ +.+|+..|.|+|.+
T Consensus 226 ~g~~T~Im~ASfRn~~qi~~laG~D~l 252 (333)
T PTZ00411 226 HGYKTIVMGASFRNTGEILELAGCDKL 252 (333)
T ss_pred cCCCeEEEecccCCHHHHHHHHCCCEE
Confidence 776 46788889999944
No 24
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=28.21 E-value=85 Score=29.85 Aligned_cols=86 Identities=16% Similarity=0.195 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhCCCCchhHHHHhhhhhhhh--ccCCCCCCCCCCCCCCCCCCCCC--CCCCCCC----CHHHHHHHHHHh
Q 025653 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQEG--RLPDAKQ----GNDHLRQVFGAQ 148 (250)
Q Consensus 77 ~~~~i~~~k~~~~~VS~ADiialaa~~av~--~~GGP~~~~~~GR~D~~~~~~~~--~lP~p~~----~~~~l~~~F~~~ 148 (250)
|+..+..++++ .|.|-=.+.+....|+. .+|-..+..++||.|...-...+ .+|...+ .+.++.+.| +.
T Consensus 143 Gi~A~~~L~~~--GI~~n~TlvFS~~QA~aaaeAGa~~ISPfVgRi~dw~~~~~g~~~~~~~~dpGv~~v~~i~~~~-~~ 219 (391)
T PRK12309 143 GIKAAEVLEKE--GIHCNLTLLFGFHQAIACAEAGVTLISPFVGRILDWYKKETGRDSYPGAEDPGVQSVTQIYNYY-KK 219 (391)
T ss_pred HHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEeecchhhhhhhhccCCCccccccchHHHHHHHHHHHH-Hh
Confidence 55555555543 33333333444444333 35778899999998774432211 1332222 356677788 77
Q ss_pred cCCC----------hhhHhhhccCccc
Q 025653 149 MGLS----------DKDIVALSGGHTL 165 (250)
Q Consensus 149 ~Gl~----------~~e~VaL~GaHti 165 (250)
.|+. ..++..|.|+|.+
T Consensus 220 ~~~~T~Im~ASfRn~~~v~~laG~d~~ 246 (391)
T PRK12309 220 FGYKTEVMGASFRNIGEIIELAGCDLL 246 (391)
T ss_pred cCCCcEEEecccCCHHHHHHHHCCCee
Confidence 7753 5778888899844
No 25
>PRK05269 transaldolase B; Provisional
Probab=27.85 E-value=43 Score=30.94 Aligned_cols=86 Identities=15% Similarity=0.115 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhCCCCchhHHHHhhhhhhhh--ccCCCCCCCCCCCCCCCCCCC---CCCCCC---CCCCHHHHHHHHHHh
Q 025653 77 AVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEPPQ---EGRLPD---AKQGNDHLRQVFGAQ 148 (250)
Q Consensus 77 ~~~~i~~~k~~~~~VS~ADiialaa~~av~--~~GGP~~~~~~GR~D~~~~~~---~~~lP~---p~~~~~~l~~~F~~~ 148 (250)
|+..+..++++ .|.|-=.+.+....|+. .+|-..+..++||.|...-.. ...-+. +-..+.++.+.| +.
T Consensus 139 Gi~A~~~L~~~--GI~vn~TlvFs~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~-k~ 215 (318)
T PRK05269 139 GIRAAEQLEKE--GINCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKKNTGKKEYAPAEDPGVVSVTKIYNYY-KK 215 (318)
T ss_pred HHHHHHHHHHc--CCceeEeEecCHHHHHHHHHcCCCEEEeeccHHHHHhhhcccccccCcCCCcHHHHHHHHHHHH-HH
Confidence 55555555543 23333223333333332 357788899999998642211 111111 222456778888 88
Q ss_pred cCCC----------hhhHhhhccCccc
Q 025653 149 MGLS----------DKDIVALSGGHTL 165 (250)
Q Consensus 149 ~Gl~----------~~e~VaL~GaHti 165 (250)
.|+. ..++..|.|+|++
T Consensus 216 ~~~~t~im~ASfrn~~~v~~laG~d~v 242 (318)
T PRK05269 216 HGYKTVVMGASFRNTGQILELAGCDRL 242 (318)
T ss_pred cCCCceEEeeccCCHHHHHHHhCCCeE
Confidence 8764 5677788888855
No 26
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=22.20 E-value=78 Score=29.27 Aligned_cols=86 Identities=15% Similarity=0.126 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhCCCCchhHHHHhhhhhhh--hccCCCCCCCCCCCCCCCCCCCC---CCCCC---CCCCHHHHHHHHHHh
Q 025653 77 AVRLLEPFKEQFPTISYADLYQLAGVVGV--EVTGGPDIPFHPGRDDKAEPPQE---GRLPD---AKQGNDHLRQVFGAQ 148 (250)
Q Consensus 77 ~~~~i~~~k~~~~~VS~ADiialaa~~av--~~~GGP~~~~~~GR~D~~~~~~~---~~lP~---p~~~~~~l~~~F~~~ 148 (250)
|+..+..++++ .|+|-=.+.+....|+ ..+|-..+..++||.+-..-... ...+. +-..+.++.+.| ++
T Consensus 137 Gi~A~~~L~~~--GI~vN~TliFS~~Qa~aaa~AGa~~ISPFVgRi~dw~~~~~g~~~~~~~~d~Gv~~v~~i~~~~-k~ 213 (317)
T TIGR00874 137 GIRAAEELEKE--GIHCNLTLLFSFVQAIACAEAKVTLISPFVGRILDWYKAATGKKEYSIEEDPGVASVKKIYNYY-KK 213 (317)
T ss_pred HHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEeecchHhHhhhhccCccccccccCchHHHHHHHHHHH-HH
Confidence 55555555543 2222222233333333 33577889999999876422111 11111 223456677888 88
Q ss_pred cCCC----------hhhHhhhccCccc
Q 025653 149 MGLS----------DKDIVALSGGHTL 165 (250)
Q Consensus 149 ~Gl~----------~~e~VaL~GaHti 165 (250)
.|+. .+|+.+|.|+|.+
T Consensus 214 ~g~~T~Im~ASfRn~~qv~~laG~d~~ 240 (317)
T TIGR00874 214 HGYPTEVMGASFRNKEEILALAGCDRL 240 (317)
T ss_pred cCCCcEEEeeccCCHHHHHHHHCCCeE
Confidence 8864 6788888898843
No 27
>cd00439 Transaldolase Transaldolase. Enzymes found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.
Probab=20.35 E-value=51 Score=29.31 Aligned_cols=48 Identities=10% Similarity=-0.084 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHhhhhhhhh--ccCCCCCCCCCCCCCCCCC
Q 025653 76 IAVRLLEPFKEQFPTISYADLYQLAGVVGVE--VTGGPDIPFHPGRDDKAEP 125 (250)
Q Consensus 76 ~~~~~i~~~k~~~~~VS~ADiialaa~~av~--~~GGP~~~~~~GR~D~~~~ 125 (250)
.|+..+..++++ .|++-=.+.+....++. .+|...+.+++||.|...-
T Consensus 127 ~Gl~A~~~L~~~--GI~vn~T~vfs~~Qa~~aa~Aga~~ispfvgRid~~~~ 176 (252)
T cd00439 127 EGIPAIKDLIAA--GISVNVTLIFSIAQYEAVADAGTSVASPFVSRIDTLMD 176 (252)
T ss_pred HHHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEEeccHHHHHhh
Confidence 356666666654 23333333444444433 3577788999999987664
Done!